Query 041117
Match_columns 249
No_of_seqs 169 out of 1904
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 03:58:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041117.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041117hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 4.4E-39 9.6E-44 248.0 23.0 240 1-245 90-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 8.2E-37 1.8E-41 239.4 22.9 235 1-247 81-317 (318)
3 PF07859 Abhydrolase_3: alpha/ 100.0 5E-36 1.1E-40 223.0 13.6 206 4-224 1-210 (211)
4 COG0657 Aes Esterase/lipase [L 100.0 7.5E-34 1.6E-38 223.0 22.8 230 1-245 79-310 (312)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 4.7E-25 1E-29 186.8 15.9 212 1-248 394-619 (620)
6 KOG1455 Lysophospholipase [Lip 99.9 3.5E-24 7.7E-29 158.9 15.0 216 3-245 56-312 (313)
7 PF00326 Peptidase_S9: Prolyl 99.9 5.7E-25 1.2E-29 163.7 7.9 195 22-248 3-212 (213)
8 PLN02298 hydrolase, alpha/beta 99.9 3.3E-22 7.1E-27 158.6 21.3 223 2-247 60-319 (330)
9 PLN02385 hydrolase; alpha/beta 99.9 8.7E-23 1.9E-27 162.9 16.9 225 1-248 87-348 (349)
10 PRK10566 esterase; Provisional 99.9 5.8E-22 1.3E-26 151.1 16.8 202 1-246 27-249 (249)
11 PHA02857 monoglyceride lipase; 99.9 8.6E-22 1.9E-26 152.5 17.7 216 2-246 26-274 (276)
12 TIGR02821 fghA_ester_D S-formy 99.9 9.2E-22 2E-26 151.7 17.2 205 1-246 42-275 (275)
13 COG1647 Esterase/lipase [Gener 99.9 6.3E-23 1.4E-27 145.2 9.6 211 3-244 17-243 (243)
14 PF10340 DUF2424: Protein of u 99.9 3.5E-21 7.5E-26 149.5 18.2 209 2-224 123-351 (374)
15 PRK10749 lysophospholipase L2; 99.9 3.9E-21 8.6E-26 152.1 18.6 224 2-245 55-329 (330)
16 COG2267 PldB Lysophospholipase 99.9 2.9E-21 6.3E-26 149.5 16.4 228 2-248 35-297 (298)
17 PLN02824 hydrolase, alpha/beta 99.9 5.3E-21 1.1E-25 149.4 15.6 215 2-245 30-294 (294)
18 PLN02652 hydrolase; alpha/beta 99.9 3E-20 6.4E-25 149.2 17.9 220 2-247 137-389 (395)
19 PLN02442 S-formylglutathione h 99.9 2.6E-20 5.7E-25 143.9 15.8 205 1-247 47-282 (283)
20 TIGR02240 PHA_depoly_arom poly 99.9 2.8E-20 6.1E-25 144.0 15.9 215 2-246 26-267 (276)
21 PRK00870 haloalkane dehalogena 99.9 5E-20 1.1E-24 144.4 17.4 217 2-245 47-301 (302)
22 PLN02965 Probable pheophorbida 99.9 1.1E-19 2.3E-24 139.1 18.7 214 3-244 5-252 (255)
23 PRK10115 protease 2; Provision 99.8 3.1E-20 6.7E-25 158.6 15.9 217 1-247 445-677 (686)
24 PRK11460 putative hydrolase; P 99.8 1.5E-19 3.2E-24 135.7 17.5 173 1-247 16-210 (232)
25 TIGR03056 bchO_mg_che_rel puta 99.8 1.2E-19 2.5E-24 140.5 16.7 213 2-243 29-278 (278)
26 PRK03592 haloalkane dehalogena 99.8 5.1E-20 1.1E-24 143.9 13.8 98 2-122 28-128 (295)
27 TIGR03611 RutD pyrimidine util 99.8 2.7E-19 5.8E-24 136.7 17.2 212 2-243 14-256 (257)
28 PRK05077 frsA fermentation/res 99.8 2.4E-19 5.1E-24 145.2 17.3 212 1-246 194-413 (414)
29 TIGR02427 protocat_pcaD 3-oxoa 99.8 1.6E-19 3.4E-24 137.2 15.5 214 1-243 13-251 (251)
30 PRK13604 luxD acyl transferase 99.8 4.9E-19 1.1E-23 135.0 17.9 188 2-224 38-246 (307)
31 PLN02679 hydrolase, alpha/beta 99.8 2.3E-19 5E-24 143.5 16.8 217 2-244 89-356 (360)
32 TIGR03343 biphenyl_bphD 2-hydr 99.8 3.2E-19 6.9E-24 138.5 16.2 214 2-243 31-281 (282)
33 KOG4627 Kynurenine formamidase 99.8 4.9E-20 1.1E-24 128.9 10.1 177 2-222 68-247 (270)
34 PF12695 Abhydrolase_5: Alpha/ 99.8 3.9E-19 8.5E-24 124.3 14.5 143 3-222 1-145 (145)
35 PF01738 DLH: Dienelactone hyd 99.8 2.2E-19 4.8E-24 134.1 13.8 180 1-246 14-218 (218)
36 TIGR03695 menH_SHCHC 2-succiny 99.8 3E-19 6.5E-24 135.5 14.5 213 1-243 1-251 (251)
37 PRK10673 acyl-CoA esterase; Pr 99.8 6.5E-19 1.4E-23 134.8 15.7 213 2-244 17-254 (255)
38 PRK10985 putative hydrolase; P 99.8 5.9E-19 1.3E-23 139.3 15.7 224 2-247 59-322 (324)
39 PRK10349 carboxylesterase BioH 99.8 6.5E-19 1.4E-23 134.9 15.3 211 2-243 14-254 (256)
40 TIGR01738 bioH putative pimelo 99.8 5.2E-19 1.1E-23 134.0 14.1 210 2-242 5-245 (245)
41 PRK03204 haloalkane dehalogena 99.8 8.4E-19 1.8E-23 136.2 15.3 214 2-242 35-285 (286)
42 KOG1552 Predicted alpha/beta h 99.8 6E-19 1.3E-23 128.7 12.7 188 2-247 61-254 (258)
43 PLN02894 hydrolase, alpha/beta 99.8 3.8E-18 8.3E-23 138.0 18.6 101 2-122 106-211 (402)
44 PLN02511 hydrolase 99.8 7E-19 1.5E-23 141.8 13.3 223 2-246 101-366 (388)
45 TIGR01250 pro_imino_pep_2 prol 99.8 2.9E-18 6.3E-23 133.0 16.3 100 2-122 26-131 (288)
46 PLN00021 chlorophyllase 99.8 7.2E-18 1.6E-22 131.2 18.3 205 1-247 52-285 (313)
47 PRK11126 2-succinyl-6-hydroxy- 99.8 1.6E-18 3.5E-23 131.6 14.1 100 2-122 3-102 (242)
48 PF02230 Abhydrolase_2: Phosph 99.8 1.4E-18 3E-23 129.4 13.4 115 76-246 100-216 (216)
49 TIGR03100 hydr1_PEP hydrolase, 99.8 2.2E-18 4.8E-23 132.9 14.1 217 2-244 27-274 (274)
50 KOG2100 Dipeptidyl aminopeptid 99.8 4.9E-18 1.1E-22 145.7 16.1 212 1-248 526-750 (755)
51 PRK11071 esterase YqiA; Provis 99.8 1.9E-17 4.2E-22 120.3 16.7 180 2-243 2-189 (190)
52 PRK06489 hypothetical protein; 99.8 4.3E-18 9.3E-23 136.4 13.5 98 2-121 70-188 (360)
53 COG0400 Predicted esterase [Ge 99.8 1.6E-17 3.6E-22 120.5 15.0 173 2-246 19-206 (207)
54 PLN02578 hydrolase 99.8 3.1E-17 6.7E-22 131.2 18.2 98 2-122 87-187 (354)
55 PLN03084 alpha/beta hydrolase 99.8 1.2E-17 2.5E-22 133.6 15.6 99 2-123 128-233 (383)
56 KOG4388 Hormone-sensitive lipa 99.8 1E-17 2.3E-22 133.9 15.0 107 3-118 398-504 (880)
57 PLN03087 BODYGUARD 1 domain co 99.8 1.4E-17 2.9E-22 135.9 15.4 100 2-122 202-309 (481)
58 PLN02211 methyl indole-3-aceta 99.8 1.4E-16 3E-21 122.8 20.3 100 2-122 19-122 (273)
59 TIGR01607 PST-A Plasmodium sub 99.8 3E-17 6.5E-22 129.8 16.6 216 23-244 64-332 (332)
60 PRK14875 acetoin dehydrogenase 99.8 3.4E-17 7.4E-22 132.1 16.4 211 2-244 132-370 (371)
61 KOG4178 Soluble epoxide hydrol 99.8 8.4E-17 1.8E-21 121.7 17.1 99 2-122 45-148 (322)
62 TIGR01840 esterase_phb esteras 99.8 3.2E-17 6.9E-22 121.8 14.7 168 1-207 13-197 (212)
63 PRK07581 hypothetical protein; 99.8 3.1E-17 6.7E-22 130.6 14.8 62 181-247 276-338 (339)
64 PF12697 Abhydrolase_6: Alpha/ 99.8 1.7E-18 3.6E-23 129.5 7.1 196 4-226 1-220 (228)
65 COG0412 Dienelactone hydrolase 99.8 2.7E-16 5.7E-21 117.8 18.2 179 2-247 28-235 (236)
66 KOG1454 Predicted hydrolase/ac 99.7 7.4E-17 1.6E-21 126.3 13.3 219 2-246 59-325 (326)
67 TIGR01249 pro_imino_pep_1 prol 99.7 4.3E-16 9.4E-21 122.3 17.6 98 2-122 28-130 (306)
68 COG0429 Predicted hydrolase of 99.7 9.1E-17 2E-21 121.4 13.0 224 1-247 75-342 (345)
69 PRK08775 homoserine O-acetyltr 99.7 4.7E-17 1E-21 129.7 12.1 86 21-123 84-174 (343)
70 KOG4409 Predicted hydrolase/ac 99.7 1E-16 2.2E-21 121.8 11.3 108 2-125 91-198 (365)
71 TIGR03101 hydr2_PEP hydrolase, 99.7 9.3E-16 2E-20 116.4 15.4 219 1-240 25-263 (266)
72 TIGR01836 PHA_synth_III_C poly 99.7 2.6E-15 5.6E-20 120.0 18.4 105 2-126 63-175 (350)
73 PLN02980 2-oxoglutarate decarb 99.7 2.6E-16 5.6E-21 145.7 14.0 220 2-248 1372-1642(1655)
74 TIGR01392 homoserO_Ac_trn homo 99.7 9.8E-17 2.1E-21 128.2 8.1 102 2-123 32-163 (351)
75 PRK00175 metX homoserine O-ace 99.7 8.2E-16 1.8E-20 123.9 13.1 65 181-248 310-377 (379)
76 KOG4391 Predicted alpha/beta h 99.7 4.9E-16 1.1E-20 110.1 10.2 199 1-246 78-283 (300)
77 KOG1838 Alpha/beta hydrolase [ 99.7 4.2E-15 9.1E-20 116.3 15.9 223 1-245 125-388 (409)
78 COG2945 Predicted hydrolase of 99.7 4.7E-15 1E-19 103.3 14.1 176 1-246 28-209 (210)
79 PF12740 Chlorophyllase2: Chlo 99.6 2.8E-14 6E-19 106.2 17.0 116 1-123 17-132 (259)
80 KOG4667 Predicted esterase [Li 99.6 4.9E-15 1.1E-19 104.9 11.6 207 2-247 34-260 (269)
81 KOG2281 Dipeptidyl aminopeptid 99.6 1.5E-14 3.2E-19 117.4 14.4 208 1-244 642-866 (867)
82 PLN02872 triacylglycerol lipas 99.6 1.7E-14 3.7E-19 115.8 14.1 104 2-124 75-199 (395)
83 COG2272 PnbA Carboxylesterase 99.6 1.5E-15 3.2E-20 120.7 7.4 112 1-123 94-218 (491)
84 PF05728 UPF0227: Uncharacteri 99.6 1.4E-13 3E-18 98.9 16.4 183 3-242 1-186 (187)
85 PRK05855 short chain dehydroge 99.6 2E-14 4.4E-19 122.6 14.0 84 2-101 26-114 (582)
86 cd00312 Esterase_lipase Estera 99.6 5.3E-15 1.1E-19 123.6 8.3 110 1-123 95-214 (493)
87 PF05448 AXE1: Acetyl xylan es 99.6 7.5E-15 1.6E-19 114.5 7.4 206 1-245 83-320 (320)
88 KOG2564 Predicted acetyltransf 99.6 5.4E-14 1.2E-18 103.6 10.8 96 2-118 75-178 (343)
89 KOG2382 Predicted alpha/beta h 99.6 2.1E-13 4.6E-18 103.5 14.1 220 1-246 52-314 (315)
90 PF00135 COesterase: Carboxyle 99.6 8.9E-15 1.9E-19 123.6 7.3 111 1-122 125-245 (535)
91 KOG2112 Lysophospholipase [Lip 99.5 3.4E-13 7.4E-18 95.7 13.9 176 3-244 5-203 (206)
92 PF08840 BAAT_C: BAAT / Acyl-C 99.5 7.7E-14 1.7E-18 103.2 10.7 176 54-247 3-212 (213)
93 PF07224 Chlorophyllase: Chlor 99.5 4.3E-13 9.4E-18 98.1 13.1 115 1-125 46-160 (307)
94 COG3208 GrsT Predicted thioest 99.5 1.5E-12 3.3E-17 94.8 14.1 212 3-243 10-234 (244)
95 TIGR01838 PHA_synth_I poly(R)- 99.5 2.9E-12 6.3E-17 106.0 17.0 110 2-126 189-306 (532)
96 TIGR00976 /NonD putative hydro 99.5 3.2E-12 7E-17 107.9 17.1 107 1-124 22-134 (550)
97 PF06500 DUF1100: Alpha/beta h 99.5 5E-13 1.1E-17 105.6 11.0 210 2-246 191-410 (411)
98 PRK07868 acyl-CoA synthetase; 99.5 1.3E-12 2.9E-17 117.2 15.1 104 2-124 68-179 (994)
99 COG1505 Serine proteases of th 99.5 2.9E-13 6.3E-18 109.5 9.3 213 2-247 422-648 (648)
100 COG3571 Predicted hydrolase of 99.5 1.3E-11 2.9E-16 83.6 15.1 178 3-244 16-210 (213)
101 PRK06765 homoserine O-acetyltr 99.5 5.8E-13 1.3E-17 107.0 10.1 61 181-244 324-387 (389)
102 PRK10439 enterobactin/ferric e 99.4 1.5E-11 3.3E-16 99.4 18.1 188 1-243 209-407 (411)
103 PRK05371 x-prolyl-dipeptidyl a 99.4 3.8E-12 8.3E-17 110.2 15.4 212 25-247 271-521 (767)
104 KOG2984 Predicted hydrolase [G 99.4 1.7E-13 3.7E-18 96.3 5.8 209 3-245 44-276 (277)
105 KOG3101 Esterase D [General fu 99.4 9.3E-13 2E-17 93.2 8.8 214 1-247 44-281 (283)
106 PF03403 PAF-AH_p_II: Platelet 99.4 2.6E-12 5.7E-17 102.7 12.4 187 1-247 100-360 (379)
107 PF10503 Esterase_phd: Esteras 99.4 3.9E-12 8.5E-17 93.6 11.7 105 1-122 16-132 (220)
108 PF08538 DUF1749: Protein of u 99.4 2.2E-13 4.8E-18 103.3 4.6 228 3-243 35-303 (303)
109 cd00707 Pancreat_lipase_like P 99.4 3.3E-12 7.1E-17 98.3 10.3 107 1-124 36-149 (275)
110 KOG3043 Predicted hydrolase re 99.4 6.2E-12 1.3E-16 90.0 10.3 159 22-246 56-241 (242)
111 COG3458 Acetyl esterase (deace 99.4 4.5E-12 9.8E-17 93.2 9.7 208 1-246 83-318 (321)
112 PF06821 Ser_hydrolase: Serine 99.4 3.8E-11 8.1E-16 85.5 13.1 150 4-222 1-153 (171)
113 COG0627 Predicted esterase [Ge 99.3 9.2E-12 2E-16 96.4 10.2 153 81-248 152-314 (316)
114 TIGR03230 lipo_lipase lipoprot 99.3 4.3E-11 9.3E-16 96.5 13.0 105 1-122 41-154 (442)
115 COG4099 Predicted peptidase [G 99.3 6.1E-12 1.3E-16 93.6 7.3 118 75-245 263-385 (387)
116 COG1770 PtrB Protease II [Amin 99.3 2E-11 4.2E-16 100.3 10.2 192 2-222 449-656 (682)
117 PF00561 Abhydrolase_1: alpha/ 99.3 5.8E-13 1.3E-17 100.0 0.2 71 35-121 1-78 (230)
118 PF12715 Abhydrolase_7: Abhydr 99.3 2.2E-11 4.7E-16 94.9 7.6 80 24-119 151-257 (390)
119 PF03583 LIP: Secretory lipase 99.2 6.6E-10 1.4E-14 86.1 15.5 212 23-248 16-284 (290)
120 COG0596 MhpC Predicted hydrola 99.2 2.1E-09 4.6E-14 81.7 18.2 100 2-122 22-123 (282)
121 COG3509 LpqC Poly(3-hydroxybut 99.2 1.5E-09 3.3E-14 81.3 15.8 104 2-122 62-179 (312)
122 PF00756 Esterase: Putative es 99.2 3.7E-12 8E-17 97.3 1.7 42 78-125 112-153 (251)
123 KOG1516 Carboxylesterase and r 99.2 3.7E-11 8.1E-16 101.8 6.4 111 1-121 112-231 (545)
124 PRK04940 hypothetical protein; 99.2 1.8E-09 3.8E-14 76.3 12.9 119 81-244 60-179 (180)
125 PF06057 VirJ: Bacterial virul 99.2 3E-10 6.4E-15 80.4 9.0 182 3-244 4-191 (192)
126 KOG3847 Phospholipase A2 (plat 99.1 1E-09 2.2E-14 82.6 11.4 187 1-247 118-373 (399)
127 KOG2237 Predicted serine prote 99.1 1.4E-09 3.1E-14 89.1 12.6 217 1-247 470-707 (712)
128 PF02129 Peptidase_S15: X-Pro 99.1 5.5E-10 1.2E-14 86.3 9.8 82 29-126 53-140 (272)
129 TIGR01839 PHA_synth_II poly(R) 99.1 1.3E-08 2.7E-13 84.1 15.6 91 23-126 237-332 (560)
130 COG2382 Fes Enterochelin ester 99.0 2.5E-09 5.5E-14 80.6 8.8 178 1-226 98-284 (299)
131 PF10230 DUF2305: Uncharacteri 99.0 6.4E-09 1.4E-13 79.7 10.7 117 2-131 3-131 (266)
132 PF03959 FSH1: Serine hydrolas 99.0 2.7E-09 5.8E-14 79.2 8.3 117 54-224 83-203 (212)
133 PF06028 DUF915: Alpha/beta hy 99.0 9.4E-09 2E-13 77.6 11.2 201 3-243 13-253 (255)
134 PF09752 DUF2048: Uncharacteri 99.0 5.6E-08 1.2E-12 75.4 14.7 87 1-103 92-197 (348)
135 PF00975 Thioesterase: Thioest 98.9 5.3E-09 1.2E-13 78.7 8.7 101 2-121 1-103 (229)
136 TIGR03502 lipase_Pla1_cef extr 98.9 8.9E-09 1.9E-13 88.5 9.9 96 1-102 449-576 (792)
137 KOG4389 Acetylcholinesterase/B 98.9 1.7E-09 3.6E-14 86.1 4.4 109 3-122 137-255 (601)
138 PF06342 DUF1057: Alpha/beta h 98.9 3E-08 6.4E-13 74.3 10.1 98 2-122 36-137 (297)
139 COG4188 Predicted dienelactone 98.9 2E-08 4.4E-13 78.1 9.4 94 1-101 71-179 (365)
140 COG3545 Predicted esterase of 98.9 2.8E-07 6.1E-12 64.1 13.8 120 80-244 58-178 (181)
141 PF07819 PGAP1: PGAP1-like pro 98.8 2.3E-08 5.1E-13 74.6 8.5 106 2-120 5-121 (225)
142 COG4757 Predicted alpha/beta h 98.8 3.8E-08 8.3E-13 71.2 9.1 201 21-242 45-280 (281)
143 PF00151 Lipase: Lipase; Inte 98.8 6.3E-09 1.4E-13 81.8 3.8 107 1-122 71-187 (331)
144 TIGR01849 PHB_depoly_PhaZ poly 98.8 1.3E-07 2.9E-12 75.8 11.0 90 23-126 120-212 (406)
145 COG2021 MET2 Homoserine acetyl 98.7 3.7E-07 8E-12 71.1 12.0 64 175-244 302-367 (368)
146 KOG2624 Triglyceride lipase-ch 98.7 7.6E-07 1.7E-11 71.4 13.7 108 1-125 73-202 (403)
147 PF11144 DUF2920: Protein of u 98.7 1.9E-06 4.1E-11 68.3 15.6 173 55-245 164-367 (403)
148 PF01674 Lipase_2: Lipase (cla 98.7 5E-08 1.1E-12 71.9 5.8 83 3-101 3-95 (219)
149 COG3150 Predicted esterase [Ge 98.7 7.7E-07 1.7E-11 61.2 10.7 128 81-243 59-187 (191)
150 COG4814 Uncharacterized protei 98.6 1.9E-05 4.2E-10 58.3 16.6 199 4-244 48-286 (288)
151 PF05990 DUF900: Alpha/beta hy 98.6 6.5E-07 1.4E-11 67.3 9.3 112 2-124 19-139 (233)
152 KOG3253 Predicted alpha/beta h 98.5 1E-06 2.2E-11 72.4 10.5 169 2-226 177-349 (784)
153 COG3243 PhaC Poly(3-hydroxyalk 98.5 5E-06 1.1E-10 65.9 12.8 88 23-126 129-221 (445)
154 KOG3975 Uncharacterized conser 98.5 1.2E-05 2.6E-10 59.2 13.0 217 2-242 30-300 (301)
155 COG2819 Predicted hydrolase of 98.4 7.9E-06 1.7E-10 61.2 12.4 44 75-124 131-174 (264)
156 PF07082 DUF1350: Protein of u 98.4 1.9E-05 4.2E-10 58.6 13.9 203 3-245 18-232 (250)
157 PF05677 DUF818: Chlamydia CHL 98.4 1.4E-06 3E-11 67.2 7.3 71 24-101 161-235 (365)
158 COG3319 Thioesterase domains o 98.3 3.6E-06 7.9E-11 63.6 8.6 102 2-123 1-104 (257)
159 KOG2551 Phospholipase/carboxyh 98.3 7.6E-06 1.7E-10 59.3 9.4 113 83-247 106-222 (230)
160 PF05705 DUF829: Eukaryotic pr 98.3 1.5E-05 3.4E-10 60.4 11.3 60 181-242 179-240 (240)
161 COG2936 Predicted acyl esteras 98.3 5.4E-05 1.2E-09 63.0 14.2 81 28-124 75-161 (563)
162 PLN02733 phosphatidylcholine-s 98.2 5.7E-06 1.2E-10 67.7 7.9 92 20-125 108-204 (440)
163 COG4947 Uncharacterized protei 98.1 2.3E-06 5.1E-11 59.1 3.4 130 57-223 87-216 (227)
164 KOG4840 Predicted hydrolases o 98.1 0.00021 4.5E-09 52.0 13.3 90 22-125 54-147 (299)
165 PF02273 Acyl_transf_2: Acyl t 98.1 6.6E-06 1.4E-10 60.5 5.8 185 2-224 31-239 (294)
166 PRK10252 entF enterobactin syn 98.1 1.6E-05 3.4E-10 74.6 8.7 100 2-120 1069-1169(1296)
167 PF12048 DUF3530: Protein of u 98.1 0.00058 1.3E-08 53.7 16.0 117 79-245 191-309 (310)
168 PF03096 Ndr: Ndr family; Int 98.1 7.8E-05 1.7E-09 56.8 10.6 204 1-244 23-278 (283)
169 PF05057 DUF676: Putative seri 98.0 1.7E-05 3.8E-10 59.0 6.7 24 80-103 77-100 (217)
170 PF12146 Hydrolase_4: Putative 98.0 2.1E-05 4.5E-10 48.3 5.4 42 2-49 17-58 (79)
171 KOG2931 Differentiation-relate 98.0 0.0009 1.9E-08 50.9 14.6 208 1-244 46-305 (326)
172 PF02450 LCAT: Lecithin:choles 97.9 2.1E-05 4.6E-10 63.8 5.6 90 21-123 66-161 (389)
173 PF10142 PhoPQ_related: PhoPQ- 97.9 0.00012 2.5E-09 58.4 9.4 220 3-247 66-322 (367)
174 PF05577 Peptidase_S28: Serine 97.9 5.5E-05 1.2E-09 62.6 7.5 104 2-122 30-148 (434)
175 PF11339 DUF3141: Protein of u 97.8 0.0047 1E-07 50.9 16.8 72 24-104 92-163 (581)
176 COG4782 Uncharacterized protei 97.8 0.0002 4.4E-09 55.9 8.6 110 2-126 117-238 (377)
177 PTZ00472 serine carboxypeptida 97.7 0.00017 3.7E-09 59.9 7.7 52 78-129 168-223 (462)
178 KOG3724 Negative regulator of 97.7 0.00014 3.1E-09 62.1 7.1 65 35-101 133-202 (973)
179 KOG3967 Uncharacterized conser 97.7 0.00048 1E-08 49.8 8.4 100 3-117 103-222 (297)
180 COG3946 VirJ Type IV secretory 97.6 0.00085 1.8E-08 53.2 9.8 83 4-103 263-348 (456)
181 TIGR03712 acc_sec_asp2 accesso 97.5 0.0062 1.3E-07 49.8 14.0 104 2-127 290-395 (511)
182 PF11288 DUF3089: Protein of u 97.4 0.0012 2.6E-08 48.2 8.2 60 34-102 45-116 (207)
183 PF08386 Abhydrolase_4: TAP-li 97.4 0.00081 1.8E-08 43.7 6.7 60 180-244 34-93 (103)
184 COG1075 LipA Predicted acetylt 97.4 0.00045 9.7E-09 55.0 6.4 99 3-121 61-163 (336)
185 KOG1553 Predicted alpha/beta h 97.4 0.00043 9.2E-09 53.8 5.6 74 33-121 267-344 (517)
186 smart00824 PKS_TE Thioesterase 97.4 0.0014 3E-08 48.3 8.3 84 22-120 15-100 (212)
187 PF01764 Lipase_3: Lipase (cla 97.3 0.00074 1.6E-08 46.5 5.9 26 80-105 63-88 (140)
188 KOG2541 Palmitoyl protein thio 97.3 0.0024 5.1E-08 48.0 8.6 100 3-119 25-125 (296)
189 cd00741 Lipase Lipase. Lipase 97.2 0.0011 2.3E-08 46.5 5.9 26 79-104 26-51 (153)
190 PLN02517 phosphatidylcholine-s 97.2 0.00065 1.4E-08 56.9 5.2 92 22-124 158-265 (642)
191 PLN02633 palmitoyl protein thi 97.2 0.0042 9.1E-08 48.1 9.0 102 3-120 27-129 (314)
192 PLN02606 palmitoyl-protein thi 97.2 0.0038 8.2E-08 48.2 8.7 103 3-121 28-131 (306)
193 PF11187 DUF2974: Protein of u 97.2 0.00077 1.7E-08 50.3 4.8 56 54-119 65-120 (224)
194 KOG2183 Prolylcarboxypeptidase 97.1 0.0013 2.7E-08 52.5 5.5 89 24-125 101-206 (492)
195 PF00450 Peptidase_S10: Serine 97.0 0.004 8.6E-08 51.3 8.5 47 78-124 133-183 (415)
196 cd00519 Lipase_3 Lipase (class 97.0 0.0019 4.1E-08 48.6 5.9 43 79-122 126-168 (229)
197 PLN02454 triacylglycerol lipas 96.9 0.0029 6.4E-08 51.1 6.2 41 82-122 229-271 (414)
198 KOG2369 Lecithin:cholesterol a 96.5 0.0034 7.4E-08 51.0 4.1 73 22-104 126-205 (473)
199 PLN02408 phospholipase A1 96.5 0.0084 1.8E-07 47.8 6.1 24 81-104 200-223 (365)
200 PF02089 Palm_thioest: Palmito 96.3 0.0066 1.4E-07 46.5 4.4 35 81-120 80-114 (279)
201 PF01083 Cutinase: Cutinase; 96.3 0.014 3E-07 42.1 5.9 102 4-119 8-119 (179)
202 PLN02571 triacylglycerol lipas 96.3 0.013 2.8E-07 47.5 6.0 23 82-104 227-249 (413)
203 COG1073 Hydrolases of the alph 96.3 0.012 2.5E-07 45.8 5.8 63 181-246 233-298 (299)
204 PLN02209 serine carboxypeptida 96.2 0.018 3.8E-07 47.7 6.8 68 55-126 145-216 (437)
205 KOG1282 Serine carboxypeptidas 96.2 0.029 6.2E-07 46.3 7.8 52 78-129 165-220 (454)
206 PLN03016 sinapoylglucose-malat 96.2 0.018 4E-07 47.5 6.7 48 79-126 163-214 (433)
207 PLN02802 triacylglycerol lipas 96.1 0.016 3.5E-07 47.9 6.1 25 81-105 330-354 (509)
208 KOG2182 Hydrolytic enzymes of 95.9 0.13 2.8E-06 42.5 10.0 94 2-104 87-195 (514)
209 PLN00413 triacylglycerol lipas 95.9 0.017 3.6E-07 47.5 5.0 24 79-102 282-305 (479)
210 PF04301 DUF452: Protein of un 95.8 0.048 1E-06 40.2 6.8 35 80-122 56-90 (213)
211 PLN03037 lipase class 3 family 95.7 0.035 7.5E-07 46.2 6.2 23 81-103 318-340 (525)
212 PLN02162 triacylglycerol lipas 95.6 0.024 5.2E-07 46.5 4.9 24 79-102 276-299 (475)
213 PF03283 PAE: Pectinacetyleste 95.6 0.029 6.2E-07 45.2 5.3 42 54-104 137-179 (361)
214 PLN02934 triacylglycerol lipas 95.5 0.025 5.4E-07 46.9 4.8 24 79-102 319-342 (515)
215 PLN02753 triacylglycerol lipas 95.5 0.05 1.1E-06 45.4 6.3 25 80-104 311-335 (531)
216 PLN02310 triacylglycerol lipas 95.5 0.047 1E-06 44.2 6.0 23 81-103 209-231 (405)
217 KOG1551 Uncharacterized conser 95.4 0.062 1.3E-06 40.6 6.1 61 183-248 309-369 (371)
218 PLN02324 triacylglycerol lipas 95.4 0.038 8.2E-07 44.9 5.3 22 82-103 216-237 (415)
219 PLN02761 lipase class 3 family 95.0 0.077 1.7E-06 44.3 6.0 23 81-103 294-316 (527)
220 KOG4569 Predicted lipase [Lipi 94.9 0.073 1.6E-06 42.6 5.6 42 55-106 155-196 (336)
221 PLN02719 triacylglycerol lipas 94.8 0.069 1.5E-06 44.4 5.4 24 81-104 298-321 (518)
222 COG2939 Carboxypeptidase C (ca 94.8 0.077 1.7E-06 43.9 5.5 65 52-124 174-238 (498)
223 PF08237 PE-PPE: PE-PPE domain 94.6 0.27 5.9E-06 36.8 7.6 63 34-104 2-71 (225)
224 COG5153 CVT17 Putative lipase 94.5 0.063 1.4E-06 41.0 4.2 39 54-102 259-297 (425)
225 KOG4540 Putative lipase essent 94.5 0.063 1.4E-06 41.0 4.2 39 54-102 259-297 (425)
226 COG3673 Uncharacterized conser 93.9 0.96 2.1E-05 35.5 9.3 41 54-103 104-144 (423)
227 PF07519 Tannase: Tannase and 93.9 0.18 3.9E-06 42.4 6.1 63 182-245 355-427 (474)
228 PLN02213 sinapoylglucose-malat 93.1 0.89 1.9E-05 36.2 8.6 49 78-126 48-100 (319)
229 PLN02847 triacylglycerol lipas 93.1 0.19 4.1E-06 42.7 4.9 24 80-103 250-273 (633)
230 PF06259 Abhydrolase_8: Alpha/ 92.3 0.37 8.1E-06 34.6 5.0 34 79-118 107-140 (177)
231 KOG2521 Uncharacterized conser 92.0 5.5 0.00012 32.0 13.4 64 182-247 227-292 (350)
232 PF06850 PHB_depo_C: PHB de-po 91.0 0.78 1.7E-05 33.3 5.3 66 179-245 133-202 (202)
233 KOG1202 Animal-type fatty acid 90.8 1.6 3.5E-05 40.6 8.1 92 2-119 2124-2216(2376)
234 PF07519 Tannase: Tannase and 90.5 1.4 3E-05 37.2 7.3 45 76-126 110-154 (474)
235 KOG2565 Predicted hydrolases o 90.2 0.74 1.6E-05 36.9 5.0 87 3-104 154-252 (469)
236 PF09994 DUF2235: Uncharacteri 89.7 0.81 1.8E-05 35.6 5.0 42 54-104 74-115 (277)
237 PF05277 DUF726: Protein of un 89.2 0.67 1.4E-05 37.1 4.3 43 79-122 218-260 (345)
238 KOG2029 Uncharacterized conser 88.4 1.5 3.4E-05 37.4 5.9 23 80-102 525-547 (697)
239 PF10686 DUF2493: Protein of u 87.7 1.7 3.6E-05 26.0 4.3 33 1-40 31-63 (71)
240 PF12242 Eno-Rase_NADH_b: NAD( 85.3 3.8 8.2E-05 24.7 4.8 42 54-102 20-61 (78)
241 KOG4372 Predicted alpha/beta h 81.0 1.9 4E-05 35.1 3.2 21 80-100 149-169 (405)
242 PF05576 Peptidase_S37: PS-10 80.1 1.6 3.4E-05 35.7 2.5 58 182-243 353-412 (448)
243 KOG1283 Serine carboxypeptidas 77.0 17 0.00036 29.0 7.0 49 77-125 118-169 (414)
244 PF06500 DUF1100: Alpha/beta h 75.0 6.7 0.00015 32.3 4.8 64 181-245 190-255 (411)
245 PF12146 Hydrolase_4: Putative 74.5 14 0.00029 22.5 5.1 58 183-243 19-79 (79)
246 KOG2385 Uncharacterized conser 73.9 3.7 8.1E-05 34.5 3.1 40 78-118 444-483 (633)
247 PF10605 3HBOH: 3HB-oligomer h 72.7 12 0.00026 32.4 5.8 63 182-244 557-636 (690)
248 cd07224 Pat_like Patatin-like 71.9 6.5 0.00014 29.7 3.9 25 78-102 26-50 (233)
249 PF05577 Peptidase_S28: Serine 71.1 7 0.00015 32.6 4.2 54 181-239 377-431 (434)
250 COG4287 PqaA PhoPQ-activated p 67.0 17 0.00037 29.5 5.2 33 78-117 231-263 (507)
251 PF10081 Abhydrolase_9: Alpha/ 66.5 26 0.00056 27.4 6.0 87 26-120 54-145 (289)
252 TIGR02240 PHA_depoly_arom poly 63.9 37 0.0008 26.1 6.8 60 181-244 26-87 (276)
253 cd07198 Patatin Patatin-like p 62.6 13 0.00029 26.4 3.8 22 81-102 26-47 (172)
254 COG0529 CysC Adenylylsulfate k 61.8 17 0.00036 26.3 3.9 37 2-42 23-59 (197)
255 cd07207 Pat_ExoU_VipD_like Exo 61.7 13 0.00028 26.9 3.7 21 82-102 28-48 (194)
256 PTZ00472 serine carboxypeptida 61.4 13 0.00029 31.4 4.0 61 182-245 366-459 (462)
257 PF04083 Abhydro_lipase: Parti 59.8 6.7 0.00015 22.8 1.5 9 1-9 43-51 (63)
258 cd07212 Pat_PNPLA9 Patatin-lik 59.7 7.8 0.00017 30.8 2.3 18 84-101 35-52 (312)
259 TIGR02690 resist_ArsH arsenica 59.6 41 0.00088 25.3 5.9 16 78-94 126-141 (219)
260 KOG1282 Serine carboxypeptidas 57.0 30 0.00065 29.2 5.2 61 182-245 365-448 (454)
261 COG0431 Predicted flavoprotein 56.4 45 0.00097 24.1 5.6 34 59-101 88-121 (184)
262 PLN02213 sinapoylglucose-malat 55.7 28 0.0006 27.8 4.8 59 182-244 235-316 (319)
263 cd07210 Pat_hypo_W_succinogene 55.7 21 0.00046 26.7 3.9 20 82-101 29-48 (221)
264 PRK10279 hypothetical protein; 55.6 19 0.00041 28.5 3.8 21 81-101 33-53 (300)
265 cd07205 Pat_PNPLA6_PNPLA7_NTE1 55.3 22 0.00047 25.3 3.9 20 82-101 29-48 (175)
266 PRK10673 acyl-CoA esterase; Pr 55.2 69 0.0015 24.0 6.9 62 179-244 15-77 (255)
267 cd07230 Pat_TGL4-5_like Triacy 54.7 19 0.00041 30.0 3.8 20 82-101 102-121 (421)
268 KOG2872 Uroporphyrinogen decar 53.4 19 0.0004 28.1 3.2 32 2-46 253-284 (359)
269 cd07228 Pat_NTE_like_bacteria 53.2 25 0.00055 25.1 3.9 22 81-102 28-49 (175)
270 cd07225 Pat_PNPLA6_PNPLA7 Pata 52.8 21 0.00046 28.3 3.7 21 81-101 43-63 (306)
271 PLN02209 serine carboxypeptida 51.7 37 0.00081 28.5 5.1 59 182-244 353-434 (437)
272 KOG1455 Lysophospholipase [Lip 51.6 1.1E+02 0.0024 24.3 7.1 63 183-245 57-120 (313)
273 cd07209 Pat_hypo_Ecoli_Z1214_l 50.3 25 0.00054 26.2 3.6 22 81-102 26-47 (215)
274 PLN02578 hydrolase 50.2 78 0.0017 25.6 6.7 62 181-246 87-150 (354)
275 cd07218 Pat_iPLA2 Calcium-inde 49.9 28 0.00061 26.6 3.9 18 84-101 33-50 (245)
276 cd07211 Pat_PNPLA8 Patatin-lik 49.8 14 0.0003 29.3 2.3 17 84-100 44-60 (308)
277 PLN03016 sinapoylglucose-malat 49.1 40 0.00087 28.3 4.9 60 182-245 349-431 (433)
278 COG4425 Predicted membrane pro 48.8 48 0.001 27.9 5.0 62 24-95 340-411 (588)
279 PF13207 AAA_17: AAA domain; P 48.5 23 0.00049 23.2 2.9 32 4-42 1-32 (121)
280 cd07204 Pat_PNPLA_like Patatin 48.1 30 0.00065 26.4 3.8 20 83-102 33-52 (243)
281 cd01819 Patatin_and_cPLA2 Pata 47.7 36 0.00078 23.8 3.9 19 81-99 28-46 (155)
282 COG3007 Uncharacterized paraqu 47.5 45 0.00098 26.3 4.5 43 55-103 22-64 (398)
283 PRK03592 haloalkane dehalogena 47.3 1.1E+02 0.0024 23.7 7.0 60 181-244 28-89 (295)
284 cd07213 Pat17_PNPLA8_PNPLA9_li 47.3 17 0.00036 28.5 2.4 19 83-101 36-54 (288)
285 COG1752 RssA Predicted esteras 47.2 32 0.00069 27.3 3.9 24 79-102 37-60 (306)
286 PF01734 Patatin: Patatin-like 46.7 17 0.00037 25.8 2.3 23 80-102 26-48 (204)
287 cd07216 Pat17_PNPLA8_PNPLA9_li 46.0 14 0.00031 29.3 1.8 17 84-100 45-61 (309)
288 TIGR01250 pro_imino_pep_2 prol 46.0 1.3E+02 0.0027 22.7 7.1 62 180-243 25-91 (288)
289 cd07227 Pat_Fungal_NTE1 Fungal 45.7 33 0.00071 26.7 3.7 21 81-101 38-58 (269)
290 cd07217 Pat17_PNPLA8_PNPLA9_li 45.4 18 0.00039 29.2 2.3 18 84-101 44-61 (344)
291 cd07208 Pat_hypo_Ecoli_yjju_li 45.1 20 0.00043 27.7 2.4 21 82-102 28-48 (266)
292 PF13478 XdhC_C: XdhC Rossmann 45.0 65 0.0014 22.1 4.7 21 23-43 10-30 (136)
293 PF00450 Peptidase_S10: Serine 44.2 13 0.00029 30.6 1.5 59 182-243 332-414 (415)
294 cd07214 Pat17_isozyme_like Pat 43.8 18 0.00039 29.3 2.1 18 84-101 46-63 (349)
295 cd07232 Pat_PLPL Patain-like p 43.3 34 0.00073 28.5 3.6 21 81-101 95-115 (407)
296 PF00975 Thioesterase: Thioest 43.1 48 0.0011 24.5 4.3 57 182-242 170-229 (229)
297 cd07199 Pat17_PNPLA8_PNPLA9_li 42.7 21 0.00044 27.4 2.2 18 84-101 37-54 (258)
298 PRK12467 peptide synthase; Pro 42.5 1.1E+02 0.0024 34.0 7.9 25 81-105 3757-3781(3956)
299 PRK09330 cell division protein 42.5 1.5E+02 0.0032 24.6 7.0 59 3-68 100-160 (384)
300 PLN02385 hydrolase; alpha/beta 41.7 1.3E+02 0.0029 24.1 6.8 63 180-244 87-152 (349)
301 PF14253 AbiH: Bacteriophage a 41.1 15 0.00033 28.3 1.3 15 79-93 233-247 (270)
302 PLN02606 palmitoyl-protein thi 40.8 79 0.0017 25.1 5.0 37 181-217 27-65 (306)
303 cd07229 Pat_TGL3_like Triacylg 39.6 46 0.001 27.5 3.8 21 81-101 111-131 (391)
304 cd07215 Pat17_PNPLA8_PNPLA9_li 39.3 24 0.00051 28.3 2.1 17 84-100 43-59 (329)
305 PRK14431 acylphosphatase; Prov 38.2 1E+02 0.0022 19.3 4.5 47 22-68 17-63 (89)
306 KOG2182 Hydrolytic enzymes of 38.0 57 0.0012 27.8 4.0 44 181-229 434-477 (514)
307 cd07231 Pat_SDP1-like Sugar-De 37.1 58 0.0012 26.1 3.8 21 81-101 96-116 (323)
308 TIGR03100 hydr1_PEP hydrolase, 36.7 2E+02 0.0043 22.2 6.9 41 181-223 27-70 (274)
309 TIGR00128 fabD malonyl CoA-acy 36.5 33 0.00072 26.6 2.6 22 80-101 82-103 (290)
310 COG4822 CbiK Cobalamin biosynt 36.1 1.7E+02 0.0037 22.0 5.7 52 3-68 140-192 (265)
311 PRK05282 (alpha)-aspartyl dipe 35.9 1.9E+02 0.0041 22.0 6.3 19 82-100 113-131 (233)
312 PF01583 APS_kinase: Adenylyls 35.7 65 0.0014 22.7 3.6 37 1-41 1-37 (156)
313 PRK13703 conjugal pilus assemb 35.7 1.1E+02 0.0024 23.6 5.0 49 4-56 147-195 (248)
314 PF00698 Acyl_transf_1: Acyl t 35.5 47 0.001 26.4 3.3 54 181-244 156-209 (318)
315 PRK00870 haloalkane dehalogena 35.3 2E+02 0.0043 22.4 6.8 61 181-244 47-111 (302)
316 KOG4127 Renal dipeptidase [Pos 35.3 1.8E+02 0.004 23.8 6.2 76 3-90 268-344 (419)
317 COG2074 2-phosphoglycerate kin 34.9 82 0.0018 24.4 4.1 60 2-68 89-155 (299)
318 TIGR02964 xanthine_xdhC xanthi 34.6 1.4E+02 0.003 22.9 5.5 31 4-43 102-132 (246)
319 KOG2214 Predicted esterase of 34.5 19 0.00042 30.4 1.0 24 80-103 201-224 (543)
320 cd07206 Pat_TGL3-4-5_SDP1 Tria 34.5 62 0.0014 25.6 3.6 20 82-101 98-117 (298)
321 TIGR00632 vsr DNA mismatch end 34.4 91 0.002 20.8 3.9 12 2-13 57-68 (117)
322 TIGR03131 malonate_mdcH malona 34.2 41 0.00088 26.4 2.7 21 80-100 75-95 (295)
323 smart00827 PKS_AT Acyl transfe 34.0 41 0.00089 26.3 2.7 21 80-100 81-101 (298)
324 cd07222 Pat_PNPLA4 Patatin-lik 33.9 37 0.0008 25.9 2.3 18 83-100 33-50 (246)
325 PLN02633 palmitoyl protein thi 33.2 1.3E+02 0.0027 24.1 5.1 38 181-218 26-65 (314)
326 TIGR03709 PPK2_rel_1 polyphosp 32.9 30 0.00065 26.8 1.7 39 1-43 55-93 (264)
327 KOG2853 Possible oxidoreductas 32.8 1.6E+02 0.0035 24.1 5.5 19 23-41 102-120 (509)
328 COG0505 CarA Carbamoylphosphat 32.7 1.9E+02 0.0041 23.7 6.0 62 23-96 191-264 (368)
329 PF14714 KH_dom-like: KH-domai 32.5 1.2E+02 0.0026 18.5 4.5 35 179-213 37-77 (80)
330 KOG1252 Cystathionine beta-syn 32.3 69 0.0015 25.8 3.5 19 81-99 303-321 (362)
331 PRK05077 frsA fermentation/res 31.7 2.7E+02 0.0059 23.3 7.2 63 181-245 194-259 (414)
332 TIGR02069 cyanophycinase cyano 31.6 2.4E+02 0.0052 21.7 6.5 18 82-99 116-133 (250)
333 PF08484 Methyltransf_14: C-me 31.6 91 0.002 22.1 3.8 36 79-120 67-102 (160)
334 PF12122 DUF3582: Protein of u 31.1 1.5E+02 0.0032 19.1 5.4 46 197-244 13-60 (101)
335 cd07220 Pat_PNPLA2 Patatin-lik 31.0 42 0.00092 25.7 2.2 20 82-101 37-56 (249)
336 cd07221 Pat_PNPLA3 Patatin-lik 30.9 46 0.001 25.6 2.4 20 82-101 33-52 (252)
337 TIGR03230 lipo_lipase lipoprot 30.9 3.1E+02 0.0067 23.3 7.3 44 179-222 40-85 (442)
338 PF00004 AAA: ATPase family as 30.4 1.3E+02 0.0027 19.7 4.4 32 5-43 1-32 (132)
339 COG5045 Ribosomal protein S10E 29.9 79 0.0017 19.8 2.8 56 24-90 10-65 (105)
340 PRK03204 haloalkane dehalogena 29.8 2.6E+02 0.0056 21.7 6.5 59 181-243 35-96 (286)
341 PRK11126 2-succinyl-6-hydroxy- 29.5 2.3E+02 0.0051 20.9 6.6 59 181-244 3-62 (242)
342 PLN02824 hydrolase, alpha/beta 28.9 2.1E+02 0.0045 22.1 5.9 61 181-245 30-99 (294)
343 COG0324 MiaA tRNA delta(2)-iso 28.8 2.3E+02 0.005 22.7 5.9 33 2-41 3-35 (308)
344 KOG1969 DNA replication checkp 28.4 3.8E+02 0.0083 24.6 7.5 32 3-41 327-358 (877)
345 TIGR03707 PPK2_P_aer polyphosp 28.1 43 0.00093 25.4 1.8 39 1-43 30-68 (230)
346 PRK00131 aroK shikimate kinase 28.0 75 0.0016 22.2 3.0 34 2-42 4-37 (175)
347 cd04251 AAK_NAGK-UC AAK_NAGK-U 28.0 1.4E+02 0.0031 22.9 4.7 8 4-11 27-34 (257)
348 PLN02652 hydrolase; alpha/beta 28.0 2.4E+02 0.0052 23.4 6.3 61 181-244 137-200 (395)
349 PF13728 TraF: F plasmid trans 27.6 1.8E+02 0.0039 21.8 5.0 36 20-55 136-171 (215)
350 COG4635 HemG Flavodoxin [Energ 27.6 1.5E+02 0.0033 21.1 4.2 64 183-246 3-74 (175)
351 COG0331 FabD (acyl-carrier-pro 27.6 51 0.0011 26.3 2.2 22 79-100 83-104 (310)
352 PF15466 DUF4635: Domain of un 27.6 76 0.0017 20.9 2.6 14 232-245 82-95 (135)
353 PRK09250 fructose-bisphosphate 27.4 3.3E+02 0.0072 22.2 6.6 84 1-92 193-293 (348)
354 PRK14429 acylphosphatase; Prov 27.2 1.6E+02 0.0035 18.4 4.1 46 22-67 17-63 (90)
355 KOG4150 Predicted ATP-dependen 27.1 2.2E+02 0.0048 25.2 5.8 44 181-224 899-945 (1034)
356 PLN02679 hydrolase, alpha/beta 26.9 3E+02 0.0066 22.3 6.7 60 181-244 89-151 (360)
357 PRK06852 aldolase; Validated 26.8 3.3E+02 0.0072 21.8 7.0 44 1-44 168-211 (304)
358 PRK14875 acetoin dehydrogenase 26.8 2.8E+02 0.0061 22.2 6.5 61 180-244 131-193 (371)
359 COG4553 DepA Poly-beta-hydroxy 26.3 1.1E+02 0.0023 24.3 3.6 65 182-247 341-409 (415)
360 TIGR02578 cas_TM1811_Csm1 CRIS 26.2 1.6E+02 0.0036 26.3 5.2 43 205-247 291-336 (648)
361 PRK13936 phosphoheptose isomer 26.1 1.8E+02 0.0038 21.3 4.7 40 55-103 27-66 (197)
362 PF09587 PGA_cap: Bacterial ca 26.0 1.2E+02 0.0027 23.1 4.0 37 3-41 187-223 (250)
363 COG2830 Uncharacterized protei 25.9 39 0.00084 24.0 1.1 32 81-120 57-88 (214)
364 PF08496 Peptidase_S49_N: Pept 25.8 1.1E+02 0.0024 21.6 3.3 50 34-95 97-146 (155)
365 cd00382 beta_CA Carbonic anhyd 25.7 1.1E+02 0.0023 20.4 3.2 31 55-95 43-73 (119)
366 PRK13948 shikimate kinase; Pro 25.7 96 0.0021 22.5 3.2 34 2-42 10-43 (182)
367 TIGR03607 patatin-related prot 25.7 1.2E+02 0.0026 27.6 4.2 21 80-100 65-85 (739)
368 PRK13938 phosphoheptose isomer 24.9 2.1E+02 0.0045 21.1 4.8 25 79-103 44-68 (196)
369 PLN03084 alpha/beta hydrolase 24.8 3.5E+02 0.0076 22.4 6.6 61 180-244 127-193 (383)
370 KOG4584 Uncharacterized conser 24.7 1E+02 0.0022 24.4 3.2 43 182-224 271-313 (348)
371 PRK14450 acylphosphatase; Prov 24.4 1.9E+02 0.0041 18.1 4.2 45 22-66 17-63 (91)
372 PF04260 DUF436: Protein of un 24.4 1.1E+02 0.0023 21.9 3.0 27 56-90 2-28 (172)
373 KOG3079 Uridylate kinase/adeny 24.3 1.6E+02 0.0035 21.6 4.0 33 2-41 8-40 (195)
374 COG0541 Ffh Signal recognition 24.2 3.8E+02 0.0083 22.7 6.5 36 78-117 211-246 (451)
375 PLN02211 methyl indole-3-aceta 23.9 3.4E+02 0.0074 20.9 7.0 63 179-244 17-82 (273)
376 cd02201 FtsZ_type1 FtsZ is a G 23.7 3.8E+02 0.0082 21.3 7.2 33 3-40 87-120 (304)
377 PRK14440 acylphosphatase; Prov 23.6 1.9E+02 0.0042 18.1 3.9 46 22-67 18-64 (90)
378 TIGR03611 RutD pyrimidine util 23.5 3E+02 0.0066 20.2 6.8 61 180-244 13-76 (257)
379 TIGR01359 UMP_CMP_kin_fam UMP- 23.5 1.1E+02 0.0023 21.8 3.2 31 4-41 1-31 (183)
380 cd04252 AAK_NAGK-fArgBP AAK_NA 23.5 95 0.002 23.8 3.0 8 4-11 31-38 (248)
381 PRK00414 gmhA phosphoheptose i 23.4 1.9E+02 0.0041 21.1 4.4 41 53-102 26-66 (192)
382 PLN02200 adenylate kinase fami 23.4 1.5E+02 0.0033 22.5 4.0 33 2-41 43-75 (234)
383 COG1830 FbaB DhnA-type fructos 23.3 3.7E+02 0.0079 21.0 7.0 46 1-46 144-191 (265)
384 PRK14436 acylphosphatase; Prov 23.2 2E+02 0.0044 18.0 4.3 45 22-66 19-64 (91)
385 PRK05441 murQ N-acetylmuramic 23.2 1.9E+02 0.0042 22.9 4.7 38 55-101 46-83 (299)
386 KOG0256 1-aminocyclopropane-1- 23.2 4.6E+02 0.01 22.1 10.2 28 75-102 141-168 (471)
387 PF01656 CbiA: CobQ/CobB/MinD/ 23.2 1.2E+02 0.0026 21.7 3.4 20 22-42 16-35 (195)
388 cd07219 Pat_PNPLA1 Patatin-lik 23.2 75 0.0016 26.2 2.4 19 83-101 46-64 (382)
389 cd00739 DHPS DHPS subgroup of 22.9 2.4E+02 0.0052 21.8 5.0 55 26-85 112-171 (257)
390 COG2312 Erythromycin esterase 22.9 1.5E+02 0.0033 24.6 4.0 72 23-100 65-160 (405)
391 COG0825 AccA Acetyl-CoA carbox 22.5 4E+02 0.0087 21.2 7.8 92 1-101 107-212 (317)
392 PRK14438 acylphosphatase; Prov 22.2 2.1E+02 0.0046 17.9 4.7 45 22-66 18-63 (91)
393 PLN02752 [acyl-carrier protein 21.9 73 0.0016 25.7 2.2 18 83-100 126-143 (343)
394 TIGR03527 selenium_YedF seleni 21.9 3.3E+02 0.0072 20.0 6.6 63 2-66 121-187 (194)
395 cd01523 RHOD_Lact_B Member of 21.6 2E+02 0.0044 17.8 3.9 10 2-11 63-72 (100)
396 TIGR02739 TraF type-F conjugat 21.6 2.7E+02 0.0059 21.6 5.0 37 19-55 165-201 (256)
397 PRK10886 DnaA initiator-associ 21.4 2.9E+02 0.0063 20.3 5.0 39 55-102 25-63 (196)
398 TIGR02427 protocat_pcaD 3-oxoa 21.3 3.3E+02 0.0071 19.7 6.7 61 180-244 13-75 (251)
399 cd05007 SIS_Etherase N-acetylm 21.3 2.4E+02 0.0053 21.7 4.8 39 55-102 33-71 (257)
400 PRK14527 adenylate kinase; Pro 21.1 91 0.002 22.5 2.4 32 2-40 6-37 (191)
401 COG2267 PldB Lysophospholipase 21.1 4E+02 0.0086 21.1 6.1 60 183-245 37-100 (298)
402 PRK14420 acylphosphatase; Prov 20.9 2E+02 0.0044 17.9 3.6 46 22-67 17-63 (91)
403 TIGR01440 conserved hypothetic 20.7 1.7E+02 0.0036 21.0 3.3 27 56-90 2-28 (172)
404 PF09419 PGP_phosphatase: Mito 20.6 3.3E+02 0.0072 19.5 5.9 52 29-91 36-88 (168)
405 PRK14427 acylphosphatase; Prov 20.6 2E+02 0.0043 18.2 3.5 46 22-67 21-67 (94)
406 PRK14422 acylphosphatase; Prov 20.5 2.4E+02 0.0051 17.8 3.9 46 22-67 21-67 (93)
407 PRK14447 acylphosphatase; Prov 20.4 1.7E+02 0.0038 18.5 3.3 45 22-66 19-65 (95)
408 CHL00202 argB acetylglutamate 20.4 1.2E+02 0.0025 23.9 3.0 8 4-11 58-65 (284)
409 PLN03229 acetyl-coenzyme A car 20.2 6.8E+02 0.015 23.0 7.9 44 1-44 199-253 (762)
410 PRK13690 hypothetical protein; 20.2 1.8E+02 0.004 21.0 3.5 29 54-90 7-35 (184)
411 PF03575 Peptidase_S51: Peptid 20.0 48 0.001 23.1 0.7 12 83-94 70-81 (154)
412 PRK14437 acylphosphatase; Prov 20.0 2.7E+02 0.0059 18.3 4.1 45 22-66 38-83 (109)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=4.4e-39 Score=247.99 Aligned_cols=240 Identities=45% Similarity=0.738 Sum_probs=209.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhh-ccCCCCCCCccC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTK-ISTVEDFPACAD 79 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~~~~~~ 79 (249)
+|+|||+|||||+.||..+..|..+..+++++.++.|+++|||++|++.+|.+++|..+++.|+.+. .. +.+.|
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~-----~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWL-----KLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHH-----HhCCC
Confidence 5999999999999999888889999999999999999999999999999999999999999999886 32 66789
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc-ccCCCCccchhhHHHHHHhhCCCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED-LNDITPLVSLRRSDWMWTAFLPEGT 158 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (249)
.++++|+|.|+||++|..++.+..+....+..++|.|+++|++.......+..+ .....+.......+.+|+.++++..
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~ 244 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGK 244 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCC
Confidence 999999999999999999999987553346799999999999998888776554 2222566667778888888888887
Q ss_pred -CCCCCCCCCCC-CCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-Ch-hHH
Q 041117 159 -DRDYPAANTFG-KHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-HE-GSF 234 (249)
Q Consensus 159 -~~~~~~~~~~~-~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~-~~~ 234 (249)
..+.+.+++.. ....+.....+||+||+.++.|.+.+++..++++|++.|.++++..++++.|++..+++. +. .+.
T Consensus 245 ~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~ 324 (336)
T KOG1515|consen 245 TDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHAL 324 (336)
T ss_pred CCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHH
Confidence 68888888876 554566666889999999999999999999999999999999999999999999998886 55 999
Q ss_pred HHHHHHHHHhh
Q 041117 235 IDDVGNFIRDQ 245 (249)
Q Consensus 235 ~~~~~~fl~~~ 245 (249)
++.+.+|+++.
T Consensus 325 ~~~i~~fi~~~ 335 (336)
T KOG1515|consen 325 MDAIVEFIKSN 335 (336)
T ss_pred HHHHHHHHhhc
Confidence 99999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=8.2e-37 Score=239.35 Aligned_cols=235 Identities=26% Similarity=0.403 Sum_probs=185.5
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
.|+|||+|||||..|+... +..+++.|+.+.|+.|+++|||++|++.++..++|+.++++|+.+... .++++.
T Consensus 81 ~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~-----~~~~d~ 153 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAE-----DYGINM 153 (318)
T ss_pred CCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHH-----HhCCCh
Confidence 4899999999999888765 678899999878999999999999999999999999999999987764 456788
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
++++|+|+|+||++|+.++.+..+.+..+..++++++++|+++.... .+..........+......+++..|.+.....
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~ 232 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS-VSRRLLGGVWDGLTQQDLQMYEEAYLSNDADR 232 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC-hhHHHhCCCccccCHHHHHHHHHHhCCCcccc
Confidence 99999999999999999998765544334578999999999886432 22222212122355566777788887654333
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-Ch-hHHHHHH
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-HE-GSFIDDV 238 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~-~~~~~~~ 238 (249)
..+...+. ..++. ..+||++|++|+.|++++++..++++++++|.++++++++|..|+|..+... ++ .+.++++
T Consensus 233 ~~p~~~p~---~~~l~-~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~ 308 (318)
T PRK10162 233 ESPYYCLF---NNDLT-RDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDG 308 (318)
T ss_pred CCcccCcc---hhhhh-cCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHH
Confidence 33333222 22331 2789999999999999999999999999999999999999999999876543 55 8999999
Q ss_pred HHHHHhhhc
Q 041117 239 GNFIRDQSA 247 (249)
Q Consensus 239 ~~fl~~~~~ 247 (249)
.+||+++++
T Consensus 309 ~~~l~~~~~ 317 (318)
T PRK10162 309 AQFFTAQLK 317 (318)
T ss_pred HHHHHHHhc
Confidence 999998875
No 3
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=100.00 E-value=5e-36 Score=223.03 Aligned_cols=206 Identities=35% Similarity=0.579 Sum_probs=162.3
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCce
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRC 83 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i 83 (249)
|||+|||||+.|++.. ...++..++++.|+.|+++|||++|+..++.+++|+.++++|+.+... +++.+.++|
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~-----~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNAD-----KLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHH-----HHTEEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccc-----cccccccce
Confidence 7999999999988776 578899999866999999999999999999999999999999999853 445788999
Q ss_pred EEEecchhHHHHHHHHHHhccccccccccccccccccCCCC-CCCCccc---ccccCCCCccchhhHHHHHHhhCCCCCC
Q 041117 84 FVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG-EERTQSE---EDLNDITPLVSLRRSDWMWTAFLPEGTD 159 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (249)
+|+|+|+||++|+.++.+..+.+ ...++++++++|+.+. .....+. ... ...+++.......++..+.+ ...
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ 149 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNEN-KDDPFLPAPKIDWFWKLYLP-GSD 149 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHH-STTSSSBHHHHHHHHHHHHS-TGG
T ss_pred EEeecccccchhhhhhhhhhhhc--ccchhhhhcccccccchhcccccccccccc-cccccccccccccccccccc-ccc
Confidence 99999999999999998876542 2359999999999887 3333333 122 22567777788888888775 444
Q ss_pred CCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeee
Q 041117 160 RDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFY 224 (249)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 224 (249)
...+..++... .+++ ..||++|++|+.|.+++++..+++++++.|.+++++++++++|+|.
T Consensus 150 ~~~~~~sp~~~--~~~~--~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 150 RDDPLASPLNA--SDLK--GLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TTSTTTSGGGS--SCCT--TCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccccccc--cccc--cCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 44555554433 1333 7899999999999999999999999999999999999999999875
No 4
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=7.5e-34 Score=223.02 Aligned_cols=230 Identities=31% Similarity=0.520 Sum_probs=185.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
.|+|||+|||||+.|+... ....+..++...|+.|+++|||+.|++.++..++|+.+++.|+.++.. .+++++
T Consensus 79 ~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~-----~~g~dp 151 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAA-----ELGIDP 151 (312)
T ss_pred CcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhH-----hhCCCc
Confidence 4899999999999998776 567888888888999999999999999999999999999999998875 567899
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHH-HHHHhhCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSD-WMWTAFLPEGTD 159 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (249)
++|+++|+|+||++++.++....+. ....+.+.++++|+++......+...... ...+...... ++...+......
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~--~~~~p~~~~li~P~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 228 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDR--GLPLPAAQVLISPLLDLTSSAASLPGYGE-ADLLDAAAILAWFADLYLGAAPD 228 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhc--CCCCceEEEEEecccCCcccccchhhcCC-ccccCHHHHHHHHHHHhCcCccc
Confidence 9999999999999999999987654 23578999999999998873333333333 4444444444 777777765544
Q ss_pred CCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHH
Q 041117 160 RDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDV 238 (249)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~ 238 (249)
...+...+.... .+. ++||++|++|+.|.+.+++..++++++++|.+++++.++++.|+|..... ++ .+.+..+
T Consensus 229 ~~~p~~spl~~~--~~~--~lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~ 303 (312)
T COG0657 229 REDPEASPLASD--DLS--GLPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQI 303 (312)
T ss_pred cCCCccCccccc--ccc--CCCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHH
Confidence 444344433222 133 48999999999999999999999999999999999999999998876655 55 7778888
Q ss_pred HHHHHhh
Q 041117 239 GNFIRDQ 245 (249)
Q Consensus 239 ~~fl~~~ 245 (249)
.+|++..
T Consensus 304 ~~~l~~~ 310 (312)
T COG0657 304 AAFLRAA 310 (312)
T ss_pred HHHHHHh
Confidence 8888743
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=4.7e-25 Score=186.76 Aligned_cols=212 Identities=18% Similarity=0.166 Sum_probs=145.9
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-----------CCCCchhhHHHHHHHHHhhcc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-----------RYPSQYDDGIDVLKFIDTKIS 69 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----------~~~~~~~d~~~~~~~l~~~~~ 69 (249)
||+||++|||.... ....+....+.++.+ ||+|+.+|||++.+. ......+|+.++++++.+...
T Consensus 394 yP~i~~~hGGP~~~---~~~~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 469 (620)
T COG1506 394 YPLIVYIHGGPSAQ---VGYSFNPEIQVLASA-GYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPL 469 (620)
T ss_pred CCEEEEeCCCCccc---cccccchhhHHHhcC-CeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCC
Confidence 69999999997422 223467788888886 999999999998663 234568999999998877664
Q ss_pred CCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC-cccccccCCCCccchhhHHH
Q 041117 70 TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT-QSEEDLNDITPLVSLRRSDW 148 (249)
Q Consensus 70 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 148 (249)
+|++|++|+|+|.||+++++.+.+. + .+++.+..++.++..... ........
T Consensus 470 --------~d~~ri~i~G~SyGGymtl~~~~~~------~-~f~a~~~~~~~~~~~~~~~~~~~~~~~------------ 522 (620)
T COG1506 470 --------VDPERIGITGGSYGGYMTLLAATKT------P-RFKAAVAVAGGVDWLLYFGESTEGLRF------------ 522 (620)
T ss_pred --------cChHHeEEeccChHHHHHHHHHhcC------c-hhheEEeccCcchhhhhccccchhhcC------------
Confidence 7889999999999999999999863 2 677777777755432221 11111000
Q ss_pred HHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCceeeeec
Q 041117 149 MWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVHGFYIF 226 (249)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 226 (249)
.+......... +.......++. .......+|+||+||++|.-++ ++..+.++|+..|.++++++||+.+|.+...
T Consensus 523 ~~~~~~~~~~~-~~~~~~~~sp~--~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~ 599 (620)
T COG1506 523 DPEENGGGPPE-DREKYEDRSPI--FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP 599 (620)
T ss_pred CHHHhCCCccc-ChHHHHhcChh--hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc
Confidence 00000000000 00001111111 1111244679999999998885 7899999999999999999999999986642
Q ss_pred CCCChhHHHHHHHHHHHhhhcC
Q 041117 227 PELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 227 ~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
... ...++++++|++++++.
T Consensus 600 ~~~--~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 600 ENR--VKVLKEILDWFKRHLKQ 619 (620)
T ss_pred hhH--HHHHHHHHHHHHHHhcC
Confidence 211 78999999999999874
No 6
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=3.5e-24 Score=158.90 Aligned_cols=216 Identities=20% Similarity=0.253 Sum_probs=140.9
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC--------CCCchhhHHHHHHHHHhhccCCCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR--------YPSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
.|+++||.|- .++..|..++.+|+.. ||.|+++||+|.+... +...++|+...++.+....+
T Consensus 56 lv~~~HG~g~----~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e----- 125 (313)
T KOG1455|consen 56 LVFLCHGYGE----HSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREE----- 125 (313)
T ss_pred EEEEEcCCcc----cchhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccc-----
Confidence 6899999552 3334488899999985 9999999999876543 23346677777777665553
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC----------------CC
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND----------------IT 138 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~----------------~~ 138 (249)
...-+.+++||||||.+|+.++.+ .|..+.|+|+++|++.............. ..
T Consensus 126 ---~~~lp~FL~GeSMGGAV~Ll~~~k------~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~ 196 (313)
T KOG1455|consen 126 ---NKGLPRFLFGESMGGAVALLIALK------DPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTK 196 (313)
T ss_pred ---cCCCCeeeeecCcchHHHHHHHhh------CCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCc
Confidence 345689999999999999999998 45589999999999876654422111100 00
Q ss_pred CccchhhHHHHHHhhCCCCCCCCCCCCCCC--------------CCCccccccCCCCcEEEEecCCCcchhh--HHHHHH
Q 041117 139 PLVSLRRSDWMWTAFLPEGTDRDYPAANTF--------------GKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQ 202 (249)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~ 202 (249)
........+...+.... +++.+..- ......+..... |++|+||++|.+++. ++++++
T Consensus 197 d~~~~~~kdp~~r~~~~-----~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv-PflilHG~dD~VTDp~~Sk~Lye 270 (313)
T KOG1455|consen 197 DIIDVAFKDPEKRKILR-----SDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV-PFLILHGTDDKVTDPKVSKELYE 270 (313)
T ss_pred cccccccCCHHHHHHhh-----cCCceecCCccHHHHHHHHHHHHHHHHhcccccc-cEEEEecCCCcccCcHHHHHHHH
Confidence 01111111111111110 01111000 001122222233 699999999999864 477777
Q ss_pred HHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhh
Q 041117 203 GLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~ 245 (249)
.+.. .+.++++|||+-|+...-...++ +.++.+|++||+++
T Consensus 271 ~A~S--~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 271 KASS--SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred hccC--CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 7664 46799999999998775445555 99999999999986
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.92 E-value=5.7e-25 Score=163.69 Aligned_cols=195 Identities=18% Similarity=0.217 Sum_probs=129.2
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCCCCCC-----------CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLAPENR-----------YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
|......|+++ ||+|+.+|||++++.. ....++|+.++++++.+... +|+++|.|+|+|+
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--------iD~~ri~i~G~S~ 73 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY--------IDPDRIGIMGHSY 73 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS--------EEEEEEEEEEETH
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc--------ccceeEEEEcccc
Confidence 44456667775 9999999999987531 11247889999999987754 7999999999999
Q ss_pred hHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCC-CCCCCCCCCCCCC
Q 041117 91 GGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPE-GTDRDYPAANTFG 169 (249)
Q Consensus 91 GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 169 (249)
||++++.++.+ .+..+++++..+|+++.......... .....+..+... ..........+..
T Consensus 74 GG~~a~~~~~~------~~~~f~a~v~~~g~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~s~~~ 136 (213)
T PF00326_consen 74 GGYLALLAATQ------HPDRFKAAVAGAGVSDLFSYYGTTDI-----------YTKAEYLEYGDPWDNPEFYRELSPIS 136 (213)
T ss_dssp HHHHHHHHHHH------TCCGSSEEEEESE-SSTTCSBHHTCC-----------HHHGHHHHHSSTTTSHHHHHHHHHGG
T ss_pred cccccchhhcc------cceeeeeeeccceecchhcccccccc-----------cccccccccCccchhhhhhhhhcccc
Confidence 99999999997 34578999999999877654322110 001011111000 0000000011111
Q ss_pred CCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhh
Q 041117 170 KHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQS 246 (249)
Q Consensus 170 ~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~ 246 (249)
+.. ... ..+|+||+||++|..+| ++.++.++|++.+.+++++++++++|.+.. ... .++.+++.+|+++++
T Consensus 137 ~~~-~~~--~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~---~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 137 PAD-NVQ--IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN---PENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGG-GCG--GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS---HHHHHHHHHHHHHHHHHHT
T ss_pred ccc-ccc--CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC---chhHHHHHHHHHHHHHHHc
Confidence 111 100 34789999999999885 579999999999999999999999995442 122 789999999999998
Q ss_pred cC
Q 041117 247 AK 248 (249)
Q Consensus 247 ~~ 248 (249)
+.
T Consensus 211 ~~ 212 (213)
T PF00326_consen 211 KK 212 (213)
T ss_dssp T-
T ss_pred CC
Confidence 75
No 8
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=3.3e-22 Score=158.59 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=128.0
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC--------CCchhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY--------PSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|+||++||.|- + ....|..++..|+++ ||+|+++|+||.+.... ....+|+..+++++.....
T Consensus 60 ~~VvllHG~~~---~-~~~~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---- 130 (330)
T PLN02298 60 ALIFMVHGYGN---D-ISWTFQSTAIFLAQM-GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE---- 130 (330)
T ss_pred eEEEEEcCCCC---C-cceehhHHHHHHHhC-CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc----
Confidence 57999999541 2 222356677788875 99999999999765432 1124566666776654321
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc----------cccCCC-----
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE----------DLNDIT----- 138 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~----------~~~~~~----- 138 (249)
.+..+++|+||||||.+++.++.+ .+..++++|+++|+........... ......
T Consensus 131 ----~~~~~i~l~GhSmGG~ia~~~a~~------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (330)
T PLN02298 131 ----FQGLPRFLYGESMGGAICLLIHLA------NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPT 200 (330)
T ss_pred ----CCCCCEEEEEecchhHHHHHHHhc------CcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccC
Confidence 234579999999999999999887 3457999999999875433111000 000000
Q ss_pred -Cccchhh---HHHHHHhhCCCCCCCCCCCC----CCCC---CCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHH
Q 041117 139 -PLVSLRR---SDWMWTAFLPEGTDRDYPAA----NTFG---KHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLK 205 (249)
Q Consensus 139 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~ 205 (249)
..+.... .........+... ...... .... .....+.... .|+||+||++|.+++. +..+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~ivp~~~~~~l~~~i~ 278 (330)
T PLN02298 201 ADLLEKSVKVPAKKIIAKRNPMRY-NGKPRLGTVVELLRVTDYLGKKLKDVS-IPFIVLHGSADVVTDPDVSRALYEEAK 278 (330)
T ss_pred CCcccccccCHHHHHHHHhCcccc-CCCccHHHHHHHHHHHHHHHHhhhhcC-CCEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 0000000 0000000000000 000000 0000 0011222222 5799999999999963 344445443
Q ss_pred HCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhhc
Q 041117 206 RHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 206 ~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~~ 247 (249)
..+.+++++++++|......+... +++.+.+.+||.+++.
T Consensus 279 --~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 279 --SEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred --cCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 235789999999997665443323 6789999999999875
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=8.7e-23 Score=162.90 Aligned_cols=225 Identities=16% Similarity=0.153 Sum_probs=125.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----Cc----hhhHHHHHHHHHhhccCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQ----YDDGIDVLKFIDTKISTVE 72 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~----~~d~~~~~~~l~~~~~~~~ 72 (249)
.|+||++||.|. + ....|..+++.|+++ ||.|+++|+||.+....+ .. ++|+.+.++.+....
T Consensus 87 ~~~iv~lHG~~~---~-~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~---- 157 (349)
T PLN02385 87 KAAVCFCHGYGD---T-CTFFFEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNP---- 157 (349)
T ss_pred CeEEEEECCCCC---c-cchHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcc----
Confidence 368999999552 2 222256788888875 999999999997654322 12 233333444332221
Q ss_pred CCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc----------c-cC-----
Q 041117 73 DFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED----------L-ND----- 136 (249)
Q Consensus 73 ~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~----------~-~~----- 136 (249)
..+..+++|+||||||.+++.++.+. +..++++|+++|............. . ..
T Consensus 158 ----~~~~~~~~LvGhSmGG~val~~a~~~------p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 227 (349)
T PLN02385 158 ----EFRGLPSFLFGQSMGGAVALKVHLKQ------PNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVP 227 (349)
T ss_pred ----ccCCCCEEEEEeccchHHHHHHHHhC------cchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecC
Confidence 13445899999999999999999884 4579999999997653221100000 0 00
Q ss_pred CCCc----cchhhHHHHHHhhCCCCCCCCCCCC---CCC---CCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHH
Q 041117 137 ITPL----VSLRRSDWMWTAFLPEGTDRDYPAA---NTF---GKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGL 204 (249)
Q Consensus 137 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l 204 (249)
...+ +........ ..+............ ..+ ......+.+.. .|+||++|++|.+++. +..+.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~-~P~Lii~G~~D~vv~~~~~~~l~~~~ 305 (349)
T PLN02385 228 QKDLAELAFRDLKKRKM-AEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVS-LPLLILHGEADKVTDPSVSKFLYEKA 305 (349)
T ss_pred CCccccccccCHHHHHH-hhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCC-CCEEEEEeCCCCccChHHHHHHHHHc
Confidence 0000 000000000 000000000000000 000 00011222223 4699999999999973 24444443
Q ss_pred HHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhhcC
Q 041117 205 KRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 205 ~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~~~ 248 (249)
. ..+++++++++++|......+... +++++++.+||++++.+
T Consensus 306 ~--~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~~ 348 (349)
T PLN02385 306 S--SSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHSTQ 348 (349)
T ss_pred C--CCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhccC
Confidence 2 236789999999997664443222 55999999999998764
No 10
>PRK10566 esterase; Provisional
Probab=99.89 E-value=5.8e-22 Score=151.12 Aligned_cols=202 Identities=16% Similarity=0.111 Sum_probs=121.9
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC--------------CchhhHHHHHHHHHh
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP--------------SQYDDGIDVLKFIDT 66 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------------~~~~d~~~~~~~l~~ 66 (249)
+|+||++||.+ ++.. .|..+++.|+++ ||.|+++|+|+.+..... ..++|+.+++.++.+
T Consensus 27 ~p~vv~~HG~~---~~~~--~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (249)
T PRK10566 27 LPTVFFYHGFT---SSKL--VYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIRE 100 (249)
T ss_pred CCEEEEeCCCC---cccc--hHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 48999999954 2332 367788888875 999999999986532110 124556666777765
Q ss_pred hccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccc--cCCCCCCCCccc-ccccCCCCccch
Q 041117 67 KISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ--PFFGGEERTQSE-EDLNDITPLVSL 143 (249)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~--p~~~~~~~~~~~-~~~~~~~~~~~~ 143 (249)
... ++.++++++|||+||.+++.++.+.+ .+++.+.+. +++.. ..... .......+. ..
T Consensus 101 ~~~--------~~~~~i~v~G~S~Gg~~al~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~ 162 (249)
T PRK10566 101 EGW--------LLDDRLAVGGASMGGMTALGIMARHP-------WVKCVASLMGSGYFTS--LARTLFPPLIPETAA-QQ 162 (249)
T ss_pred cCC--------cCccceeEEeecccHHHHHHHHHhCC-------CeeEEEEeeCcHHHHH--HHHHhcccccccccc-cH
Confidence 432 57789999999999999999988642 234333322 11110 00000 000000000 00
Q ss_pred hhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCC--ceEEEEeCCC
Q 041117 144 RRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGK--EAYLIEYPNA 219 (249)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~--~~~~~~~~~~ 219 (249)
......+..... ++. ...+.+....|+|++||++|.+++ .+.++.+++++++. +++++.++++
T Consensus 163 ~~~~~~~~~~~~------------~~~-~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~ 229 (249)
T PRK10566 163 AEFNNIVAPLAE------------WEV-THQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGV 229 (249)
T ss_pred HHHHHHHHHHhh------------cCh-hhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCC
Confidence 000111100000 000 001221122579999999999996 45788888988875 4788999999
Q ss_pred ceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 220 VHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 220 ~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
+|.+. .+.++++.+||++++
T Consensus 230 ~H~~~-------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 230 RHRIT-------PEALDAGVAFFRQHL 249 (249)
T ss_pred CCccC-------HHHHHHHHHHHHhhC
Confidence 99753 578999999999875
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.89 E-value=8.6e-22 Score=152.47 Aligned_cols=216 Identities=14% Similarity=0.150 Sum_probs=124.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----C---chhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----S---QYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~---~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|+|+++||.+. ....|..+++.|+++ ||.|+++|+||.+..... . .++|+.+.+.++.+.
T Consensus 26 ~~v~llHG~~~-----~~~~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~------ 93 (276)
T PHA02857 26 ALVFISHGAGE-----HSGRYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST------ 93 (276)
T ss_pred EEEEEeCCCcc-----ccchHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh------
Confidence 67888899552 234488899999885 999999999998654321 1 133444444443332
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccc------ccccCCCCc-------
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSE------EDLNDITPL------- 140 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~------~~~~~~~~~------- 140 (249)
.+..+++|+|||+||.+|+.++.+. +..++++|+++|........... .........
T Consensus 94 ----~~~~~~~lvG~S~GG~ia~~~a~~~------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T PHA02857 94 ----YPGVPVFLLGHSMGATISILAAYKN------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPE 163 (276)
T ss_pred ----CCCCCEEEEEcCchHHHHHHHHHhC------ccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHh
Confidence 2346899999999999999999874 44799999999976532110000 000000000
Q ss_pred -cchhhHHHHHHhhCCCCCCCCCCCCC-----C---CCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCC
Q 041117 141 -VSLRRSDWMWTAFLPEGTDRDYPAAN-----T---FGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGK 209 (249)
Q Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~ 209 (249)
+.... ..... +............. . .......+.... .|+|+++|++|.++|. +.++.+.+ ..
T Consensus 164 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvliv~G~~D~i~~~~~~~~l~~~~---~~ 237 (276)
T PHA02857 164 SVSRDM-DEVYK-YQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK-TPILILQGTNNEISDVSGAYYFMQHA---NC 237 (276)
T ss_pred hccCCH-HHHHH-HhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC-CCEEEEecCCCCcCChHHHHHHHHHc---cC
Confidence 00000 00000 10000000000000 0 000011222223 4799999999999973 23333333 23
Q ss_pred ceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhh
Q 041117 210 EAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQS 246 (249)
Q Consensus 210 ~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~ 246 (249)
+++++++++++|......+ +. +++++++.+||+++.
T Consensus 238 ~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 238 NREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNRV 274 (276)
T ss_pred CceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHhc
Confidence 6899999999997664422 22 889999999999873
No 12
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.89 E-value=9.2e-22 Score=151.71 Aligned_cols=205 Identities=18% Similarity=0.187 Sum_probs=128.8
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecC--CCCCCCC-------------CC-----------Cch
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY--RLAPENR-------------YP-----------SQY 54 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~--r~~~~~~-------------~~-----------~~~ 54 (249)
+|+|+++||.+ ++.........+..++++.|+.|++||+ ++..... +. ...
T Consensus 42 ~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~ 118 (275)
T TIGR02821 42 VPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMY 118 (275)
T ss_pred CCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHH
Confidence 58999999965 2333211223356777777999999997 3321100 00 001
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccc
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDL 134 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~ 134 (249)
..+.+.+..+.+. ..+++.++++++||||||.+|+.++.+. +..++++++++|+++.....
T Consensus 119 ~~~~~~l~~~~~~-------~~~~~~~~~~~~G~S~GG~~a~~~a~~~------p~~~~~~~~~~~~~~~~~~~------ 179 (275)
T TIGR02821 119 SYIVQELPALVAA-------QFPLDGERQGITGHSMGGHGALVIALKN------PDRFKSVSAFAPIVAPSRCP------ 179 (275)
T ss_pred HHHHHHHHHHHHh-------hCCCCCCceEEEEEChhHHHHHHHHHhC------cccceEEEEECCccCcccCc------
Confidence 1222222222222 1236778999999999999999999984 44789999999987643110
Q ss_pred cCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh---HHHHHHHHHHCCCce
Q 041117 135 NDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW---QKRHYQGLKRHGKEA 211 (249)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~~~~~~ 211 (249)
. .......++...... ....++. ....... ..||+++.+|+.|+.++. ...+.+++++++.++
T Consensus 180 -----~-----~~~~~~~~l~~~~~~-~~~~~~~-~~~~~~~--~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v 245 (275)
T TIGR02821 180 -----W-----GQKAFSAYLGADEAA-WRSYDAS-LLVADGG--RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQAL 245 (275)
T ss_pred -----c-----hHHHHHHHhcccccc-hhhcchH-HHHhhcc--cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCe
Confidence 0 011122222211111 0000110 1111111 457899999999998875 367999999999999
Q ss_pred EEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 212 YLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 212 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
++.+++|++|+|..+ ...+...++|..+++
T Consensus 246 ~~~~~~g~~H~f~~~-----~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 246 TLRRQAGYDHSYYFI-----ASFIADHLRHHAERL 275 (275)
T ss_pred EEEEeCCCCccchhH-----HHhHHHHHHHHHhhC
Confidence 999999999998876 788999999988764
No 13
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=6.3e-23 Score=145.23 Aligned_cols=211 Identities=14% Similarity=0.074 Sum_probs=135.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-------CCCCchhhHHHHHHHHHhhccCCCCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-------RYPSQYDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------~~~~~~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
.|+++|| .+|++.+ .+.+.+.|.++ ||.|.+|.|+|++.. .....++|+.+++++|.+..
T Consensus 17 AVLllHG---FTGt~~D--vr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g------- 83 (243)
T COG1647 17 AVLLLHG---FTGTPRD--VRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG------- 83 (243)
T ss_pred EEEEEec---cCCCcHH--HHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-------
Confidence 6899999 5577666 67888888886 999999999987532 34456788999999998654
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc------ccCCCCccchhhHHHH
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED------LNDITPLVSLRRSDWM 149 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 149 (249)
-+.|.++|.||||.+|+.+|.++ ++++++.+|+.+...+....... ......-...+..+..
T Consensus 84 ----y~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e 151 (243)
T COG1647 84 ----YDEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKE 151 (243)
T ss_pred ----CCeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHH
Confidence 37899999999999999999986 58999999887765443221111 0000111222333333
Q ss_pred HHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCCCceEEEEeCCCceeeeecC
Q 041117 150 WTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHGKEAYLIEYPNAVHGFYIFP 227 (249)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 227 (249)
+..+.+...................+.. ..-|++|++|.+|+.+|.. ..+.+.+. ..+.++..++++||....
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~--s~~KeL~~~e~SgHVIt~-- 226 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLIKDARRSLDK-IYSPTLVVQGRQDEMVPAESANFIYDHVE--SDDKELKWLEGSGHVITL-- 226 (243)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHhhhhh-cccchhheecccCCCCCHHHHHHHHHhcc--CCcceeEEEccCCceeec--
Confidence 3333211000000000000001112221 2346999999999999732 33444444 246799999999997553
Q ss_pred CCCh-hHHHHHHHHHHHh
Q 041117 228 ELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 228 ~~~~-~~~~~~~~~fl~~ 244 (249)
..+ +++.+.+..||+.
T Consensus 227 -D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 227 -DKERDQVEEDVITFLEK 243 (243)
T ss_pred -chhHHHHHHHHHHHhhC
Confidence 345 9999999999973
No 14
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.88 E-value=3.5e-21 Score=149.52 Aligned_cols=209 Identities=20% Similarity=0.249 Sum_probs=141.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhC-CcEEEeecCCCCC----CCCCCCchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEI-PAVVISVNYRLAP----ENRYPSQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~~----~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|+|||+|||||..+.... .-.++..+.... ...++++||.+++ ++.+|.++.++.+.+++|.+..
T Consensus 123 pVlIYlHGGGY~l~~~p~--qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-------- 192 (374)
T PF10340_consen 123 PVLIYLHGGGYFLGTTPS--QIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-------- 192 (374)
T ss_pred cEEEEEcCCeeEecCCHH--HHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc--------
Confidence 899999999998766433 222222222111 4689999999988 7889999999999999998654
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC----cccccccCCCCccchhhHHHHHHh
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT----QSEEDLNDITPLVSLRRSDWMWTA 152 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 152 (249)
+.++|+|+|.|+||++++.++....... ....++++|++|||+...... .+...... ...+.......+.+.
T Consensus 193 --G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~-~D~l~~~~~~~~~~~ 268 (374)
T PF10340_consen 193 --GNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILISPWVNLVPQDSQEGSSYHDNEK-RDMLSYKGLSMFGDA 268 (374)
T ss_pred --CCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEECCCcCCcCCCCCCCcccccccc-ccccchhhHHHHHHh
Confidence 4589999999999999999988765432 235689999999999887321 11111222 444555555556667
Q ss_pred hCCCCCCCCCCCCCCCCC-----CccccccC-CCCcEEEEecCCCcchhhHHHHHHHHHHCCC-----ceEEEEeCCCce
Q 041117 153 FLPEGTDRDYPAANTFGK-----HAVDISRV-DIPATIVIVGGFDPLKDWQKRHYQGLKRHGK-----EAYLIEYPNAVH 221 (249)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~H 221 (249)
|.+...........++.. ..++++.. ...-++|+.|+++.+.++..++++++...+. ..++.+.+++.|
T Consensus 269 y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~H 348 (374)
T PF10340_consen 269 YIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIH 348 (374)
T ss_pred hccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEecCCcc
Confidence 766522221111111111 11223221 1225999999999999999999999997654 378889999999
Q ss_pred eee
Q 041117 222 GFY 224 (249)
Q Consensus 222 ~~~ 224 (249)
.-+
T Consensus 349 i~P 351 (374)
T PF10340_consen 349 IGP 351 (374)
T ss_pred ccc
Confidence 654
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=99.88 E-value=3.9e-21 Score=152.13 Aligned_cols=224 Identities=13% Similarity=0.103 Sum_probs=129.6
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC---------CchhhHHHHHHHHHhhccCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP---------SQYDDGIDVLKFIDTKISTVE 72 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---------~~~~d~~~~~~~l~~~~~~~~ 72 (249)
|+||++||.+ .....|..++..++++ ||.|+++|+||.+....+ ..+++..+.+..+.+...
T Consensus 55 ~~vll~HG~~-----~~~~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--- 125 (330)
T PRK10749 55 RVVVICPGRI-----ESYVKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEI--- 125 (330)
T ss_pred cEEEEECCcc-----chHHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHH---
Confidence 6899999943 2233478888888875 999999999997755321 133444444433333220
Q ss_pred CCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc--------c-cc--------
Q 041117 73 DFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE--------D-LN-------- 135 (249)
Q Consensus 73 ~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~--------~-~~-------- 135 (249)
...+..+++++||||||.+++.++.+. +..++++|+++|............ . ..
T Consensus 126 ---~~~~~~~~~l~GhSmGG~ia~~~a~~~------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (330)
T PRK10749 126 ---QPGPYRKRYALAHSMGGAILTLFLQRH------PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAI 196 (330)
T ss_pred ---hcCCCCCeEEEEEcHHHHHHHHHHHhC------CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCC
Confidence 012457899999999999999999874 447899999999765322111100 0 00
Q ss_pred -----CCCCcc------chhhHHHHHHhhCCCCCCCC-CCCC----CCCC---CCccccccCCCCcEEEEecCCCcchhh
Q 041117 136 -----DITPLV------SLRRSDWMWTAFLPEGTDRD-YPAA----NTFG---KHAVDISRVDIPATIVIVGGFDPLKDW 196 (249)
Q Consensus 136 -----~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~---~~~~~~~~~~~pP~li~~g~~D~~~~~ 196 (249)
...++. .........+.+........ .... .... .....+.+.. .|+||++|++|.+++.
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~Lii~G~~D~vv~~ 275 (330)
T PRK10749 197 GTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDIT-TPLLLLQAEEERVVDN 275 (330)
T ss_pred CCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCC-CCEEEEEeCCCeeeCH
Confidence 000000 01111112222221110000 0000 0000 0001122222 4799999999999964
Q ss_pred --HHHHHHHHHHCC---CceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhh
Q 041117 197 --QKRHYQGLKRHG---KEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 197 --~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~ 245 (249)
+..+++.++.++ .+++++++++++|......+ .+ +++++++.+||+++
T Consensus 276 ~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 276 RMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-AMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-HHHHHHHHHHHHHHhhc
Confidence 466777776654 35689999999997664432 22 78999999999875
No 16
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.88 E-value=2.9e-21 Score=149.46 Aligned_cols=228 Identities=20% Similarity=0.195 Sum_probs=138.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----CCCchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----YPSQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
.+||++||.+- ....|..++..|+.+ ||.|+++|.||.+.+. ....+++..+.++.+.+... .
T Consensus 35 g~Vvl~HG~~E-----h~~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~------~ 102 (298)
T COG2267 35 GVVVLVHGLGE-----HSGRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIA------E 102 (298)
T ss_pred cEEEEecCchH-----HHHHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHh------c
Confidence 37999999663 344488999999986 9999999999876553 22335555555555555442 1
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC--CCccccc--ccC---C------C-----
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE--RTQSEED--LND---I------T----- 138 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~~--~~~---~------~----- 138 (249)
.....+++|+||||||.+|+.++.+. +..++++|+.+|++.... ....... ... . .
T Consensus 103 ~~~~~p~~l~gHSmGg~Ia~~~~~~~------~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (298)
T COG2267 103 PDPGLPVFLLGHSMGGLIALLYLARY------PPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLE 176 (298)
T ss_pred cCCCCCeEEEEeCcHHHHHHHHHHhC------CccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCccccc
Confidence 12457999999999999999999984 458999999999998773 1000000 000 0 0
Q ss_pred Ccc--chhhHHHHHHhhCCCCC-CCCCCCCC-------CCC-CCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHC
Q 041117 139 PLV--SLRRSDWMWTAFLPEGT-DRDYPAAN-------TFG-KHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRH 207 (249)
Q Consensus 139 ~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~-~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~ 207 (249)
... .........+.|..... ........ ... +....... ...|+||++|++|.+++......+..+..
T Consensus 177 ~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~-~~~PvLll~g~~D~vv~~~~~~~~~~~~~ 255 (298)
T COG2267 177 GVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPA-IALPVLLLQGGDDRVVDNVEGLARFFERA 255 (298)
T ss_pred CcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcccc-ccCCEEEEecCCCccccCcHHHHHHHHhc
Confidence 000 00011111122211110 00000000 000 01111111 22369999999999997434444555555
Q ss_pred C-CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhcC
Q 041117 208 G-KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 208 ~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
+ .++++++++|+.|......+...+++++++.+|+.+...+
T Consensus 256 ~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 256 GSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred CCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 5 3479999999999877654432289999999999998764
No 17
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=5.3e-21 Score=149.37 Aligned_cols=215 Identities=15% Similarity=0.102 Sum_probs=127.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----------CchhhHHHHHHHHHhhccCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----------SQYDDGIDVLKFIDTKISTV 71 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----------~~~~d~~~~~~~l~~~~~~~ 71 (249)
|+||++||.+ ++ ...|..+++.|+++ ++|+++|++|.+.+..+ ..+++..+.+..+.+..
T Consensus 30 ~~vlllHG~~---~~--~~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l--- 99 (294)
T PLN02824 30 PALVLVHGFG---GN--ADHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV--- 99 (294)
T ss_pred CeEEEECCCC---CC--hhHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh---
Confidence 6899999955 23 33488899999874 69999999998766533 34566666666655544
Q ss_pred CCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC--ccc-c-------cccCCCC--
Q 041117 72 EDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT--QSE-E-------DLNDITP-- 139 (249)
Q Consensus 72 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~--~~~-~-------~~~~~~~-- 139 (249)
+.++++|+||||||.+++.+|.++ +.+++++|+++|........ ... . .......
T Consensus 100 -------~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T PLN02824 100 -------VGDPAFVICNSVGGVVGLQAAVDA------PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVG 166 (294)
T ss_pred -------cCCCeEEEEeCHHHHHHHHHHHhC------hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHH
Confidence 348899999999999999999984 44799999998754221100 000 0 0000000
Q ss_pred --c----cchhhHHHHHHhhCCC---------------CCCCCC--CC--CCCCC---CCccccccCCCCcEEEEecCCC
Q 041117 140 --L----VSLRRSDWMWTAFLPE---------------GTDRDY--PA--ANTFG---KHAVDISRVDIPATIVIVGGFD 191 (249)
Q Consensus 140 --~----~~~~~~~~~~~~~~~~---------------~~~~~~--~~--~~~~~---~~~~~~~~~~~pP~li~~g~~D 191 (249)
+ ........++...... ...... .. ..... .....+.+ ...|+|+++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lvi~G~~D 245 (294)
T PLN02824 167 KAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPA-VKCPVLIAWGEKD 245 (294)
T ss_pred HHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhh-cCCCeEEEEecCC
Confidence 0 0000000110000000 000000 00 00000 00112222 2347999999999
Q ss_pred cchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhh
Q 041117 192 PLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~ 245 (249)
.+++ ...++++.+...+.++++++++||......+ +++.+.+.+|++++
T Consensus 246 ~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 294 (294)
T PLN02824 246 PWEP--VELGRAYANFDAVEDFIVLPGVGHCPQDEAP---ELVNPLIESFVARH 294 (294)
T ss_pred CCCC--hHHHHHHHhcCCccceEEeCCCCCChhhhCH---HHHHHHHHHHHhcC
Confidence 9987 3344555555556789999999996554433 89999999999764
No 18
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.86 E-value=3e-20 Score=149.23 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=126.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC--------CchhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP--------SQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|+||++||.+ ++ ...|..++..|+++ ||.|+++|+|+++..... ...+|+..+++++....
T Consensus 137 ~~Vl~lHG~~---~~--~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~----- 205 (395)
T PLN02652 137 GILIIIHGLN---EH--SGRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN----- 205 (395)
T ss_pred eEEEEECCch---HH--HHHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC-----
Confidence 6899999954 12 23378889999875 999999999997654322 12455666666665432
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc-------------ccCCC-C
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED-------------LNDIT-P 139 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-------------~~~~~-~ 139 (249)
+..+++|+||||||.+++.++.+ ++ .+..++++|+.+|++........... ..... .
T Consensus 206 -----~~~~i~lvGhSmGG~ial~~a~~-p~---~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~ 276 (395)
T PLN02652 206 -----PGVPCFLFGHSTGGAVVLKAASY-PS---IEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKR 276 (395)
T ss_pred -----CCCCEEEEEECHHHHHHHHHHhc-cC---cccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccc
Confidence 33589999999999999987652 21 12478999999998754422110000 00000 0
Q ss_pred --ccchhhHHHHHHhhCCCCCCCCCCCC-------CCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCC
Q 041117 140 --LVSLRRSDWMWTAFLPEGTDRDYPAA-------NTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHG 208 (249)
Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~ 208 (249)
..... .......+............ .........+.+.. .|+||+||++|.+++. +.++++++. +
T Consensus 277 ~~~~s~~-~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~-vPvLIi~G~~D~vvp~~~a~~l~~~~~--~ 352 (395)
T PLN02652 277 GIPVSRD-PAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVT-VPFMVLHGTADRVTDPLASQDLYNEAA--S 352 (395)
T ss_pred cCCcCCC-HHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCC-CCEEEEEeCCCCCCCHHHHHHHHHhcC--C
Confidence 00000 00111111100000000000 00000011222223 4699999999999963 344444433 3
Q ss_pred CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 209 KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 209 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
.+.+++++++++|.....+.. +++++++.+||..+++
T Consensus 353 ~~k~l~~~~ga~H~l~~e~~~--e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 353 RHKDIKLYDGFLHDLLFEPER--EEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCceEEEECCCeEEeccCCCH--HHHHHHHHHHHHHHhh
Confidence 357899999999976553221 8999999999998875
No 19
>PLN02442 S-formylglutathione hydrolase
Probab=99.86 E-value=2.6e-20 Score=143.94 Aligned_cols=205 Identities=17% Similarity=0.220 Sum_probs=123.3
Q ss_pred CCEEEEEecCccccCCCCccchh--HHHHHHHHhCCcEEEeecCCCCC-----CC---------C-C-----CC----c-
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD--DHCRRLAKEIPAVVISVNYRLAP-----EN---------R-Y-----PS----Q- 53 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~--~~~~~l~~~~g~~v~~~d~r~~~-----~~---------~-~-----~~----~- 53 (249)
+|+|+++||++ ++... |. .-+.++.+..|+.|+++|....+ .. . + +. .
T Consensus 47 ~Pvv~~lHG~~---~~~~~--~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (283)
T PLN02442 47 VPVLYWLSGLT---CTDEN--FIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRM 121 (283)
T ss_pred CCEEEEecCCC---cChHH--HHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccch
Confidence 69999999954 23322 21 11234444569999999964321 00 0 0 00 0
Q ss_pred hhhH-HHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc
Q 041117 54 YDDG-IDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE 132 (249)
Q Consensus 54 ~~d~-~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 132 (249)
...+ .+...++.+... .++.++++|+|+||||++|+.++.++ +..+++++.++|.++..... .
T Consensus 122 ~~~~~~~l~~~i~~~~~-------~~~~~~~~i~G~S~GG~~a~~~a~~~------p~~~~~~~~~~~~~~~~~~~-~-- 185 (283)
T PLN02442 122 YDYVVKELPKLLSDNFD-------QLDTSRASIFGHSMGGHGALTIYLKN------PDKYKSVSAFAPIANPINCP-W-- 185 (283)
T ss_pred hhhHHHHHHHHHHHHHH-------hcCCCceEEEEEChhHHHHHHHHHhC------chhEEEEEEECCccCcccCc-h--
Confidence 0111 222233333221 24778999999999999999999984 44789999999987643110 0
Q ss_pred cccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh---HHHHHHHHHHCCC
Q 041117 133 DLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW---QKRHYQGLKRHGK 209 (249)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~~~~ 209 (249)
... ....+..... .......+..+.. .+. ...+|+++++|++|.+++. +..+.+++++.+.
T Consensus 186 ---------~~~----~~~~~~g~~~-~~~~~~d~~~~~~-~~~-~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~ 249 (283)
T PLN02442 186 ---------GQK----AFTNYLGSDK-ADWEEYDATELVS-KFN-DVSATILIDQGEADKFLKEQLLPENFEEACKEAGA 249 (283)
T ss_pred ---------hhH----HHHHHcCCCh-hhHHHcChhhhhh-hcc-ccCCCEEEEECCCCccccccccHHHHHHHHHHcCC
Confidence 000 0111111110 0000001111110 111 1336799999999998874 5789999999999
Q ss_pred ceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 210 EAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 210 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
+++++++++.+|.|... ..++++.+.|..++++
T Consensus 250 ~~~~~~~pg~~H~~~~~-----~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 250 PVTLRLQPGYDHSYFFI-----ATFIDDHINHHAQALK 282 (283)
T ss_pred CeEEEEeCCCCccHHHH-----HHHHHHHHHHHHHHhc
Confidence 99999999999987743 6778888888887765
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.86 E-value=2.8e-20 Score=143.97 Aligned_cols=215 Identities=14% Similarity=0.077 Sum_probs=123.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC---CchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP---SQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
|+||++||.| ++. ..|..+++.|.+ ++.|+++|+||.+....+ ..+++..+.+..+.+..
T Consensus 26 ~plvllHG~~---~~~--~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l---------- 88 (276)
T TIGR02240 26 TPLLIFNGIG---ANL--ELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL---------- 88 (276)
T ss_pred CcEEEEeCCC---cch--HHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh----------
Confidence 6799999944 232 347888888865 699999999998766533 23555555555555544
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCc--ccc-cccCCCCccch----hhHHHHHH
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQ--SEE-DLNDITPLVSL----RRSDWMWT 151 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~--~~~-~~~~~~~~~~~----~~~~~~~~ 151 (249)
+.++++|+|||+||.+++.+|.+. +..++++|++++......... ... .......+... .....++.
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDY------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHC------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 457899999999999999999984 447999999988764211000 000 00000000000 00000000
Q ss_pred -----------hhCCCCCCCCC-CCC----CCCCC-CccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEE
Q 041117 152 -----------AFLPEGTDRDY-PAA----NTFGK-HAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLI 214 (249)
Q Consensus 152 -----------~~~~~~~~~~~-~~~----~~~~~-~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~ 214 (249)
.+......... ... ..... ....+.+.. .|+|+++|++|.+++. ...+.+.+...+.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P~lii~G~~D~~v~~--~~~~~l~~~~~~~~~~ 239 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQ-QPTLVLAGDDDPIIPL--INMRLLAWRIPNAELH 239 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCC-CCEEEEEeCCCCcCCH--HHHHHHHHhCCCCEEE
Confidence 00000000000 000 00000 011233333 4699999999999973 2333444434467888
Q ss_pred EeCCCceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 215 EYPNAVHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 215 ~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
++++ ||......+ +++.+.+.+|+++.-
T Consensus 240 ~i~~-gH~~~~e~p---~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 240 IIDD-GHLFLITRA---EAVAPIIMKFLAEER 267 (276)
T ss_pred EEcC-CCchhhccH---HHHHHHHHHHHHHhh
Confidence 8886 996554333 899999999998753
No 21
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=5e-20 Score=144.37 Aligned_cols=217 Identities=14% Similarity=0.100 Sum_probs=121.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----CchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----SQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|+||++||.+ .....|..+++.|+++ ||.|+++|.|+.+....+ ..+++..+.+..+.+..
T Consensus 47 ~~lvliHG~~-----~~~~~w~~~~~~L~~~-gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-------- 112 (302)
T PRK00870 47 PPVLLLHGEP-----SWSYLYRKMIPILAAA-GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-------- 112 (302)
T ss_pred CEEEEECCCC-----CchhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc--------
Confidence 7899999954 1233488889988875 999999999998765432 23455555555444443
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCC-Cc-cc---ccccCCCC----------cc
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEER-TQ-SE---EDLNDITP----------LV 141 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-~~-~~---~~~~~~~~----------~~ 141 (249)
+.++++|+|||+||.+|+.++.++ +..++++++++|....... .. .. .......+ ..
T Consensus 113 --~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (302)
T PRK00870 113 --DLTDVTLVCQDWGGLIGLRLAAEH------PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGT 184 (302)
T ss_pred --CCCCEEEEEEChHHHHHHHHHHhC------hhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccc
Confidence 457899999999999999999984 4479999998874321110 00 00 00000000 00
Q ss_pred chhhHHHHHHhhCC----CCCCCC---CCCCCCCCC----------CccccccCCCCcEEEEecCCCcchhhH-HHHHHH
Q 041117 142 SLRRSDWMWTAFLP----EGTDRD---YPAANTFGK----------HAVDISRVDIPATIVIVGGFDPLKDWQ-KRHYQG 203 (249)
Q Consensus 142 ~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~----------~~~~~~~~~~pP~li~~g~~D~~~~~~-~~~~~~ 203 (249)
...........+.. ...... ......... ....+.+. ..|+++++|++|.+++.. ..+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~ 263 (302)
T PRK00870 185 VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERW-DKPFLTAFSDSDPITGGGDAILQKR 263 (302)
T ss_pred cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcC-CCceEEEecCCCCcccCchHHHHhh
Confidence 00000011111100 000000 000000000 00112222 346999999999998732 233333
Q ss_pred HHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhh
Q 041117 204 LKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 204 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~ 245 (249)
+.. ...+++.+++++||......+ +++.+.+.+|++++
T Consensus 264 ~~~-~~~~~~~~i~~~gH~~~~e~p---~~~~~~l~~fl~~~ 301 (302)
T PRK00870 264 IPG-AAGQPHPTIKGAGHFLQEDSG---EELAEAVLEFIRAT 301 (302)
T ss_pred ccc-ccccceeeecCCCccchhhCh---HHHHHHHHHHHhcC
Confidence 321 112347899999997654443 89999999999865
No 22
>PLN02965 Probable pheophorbidase
Probab=99.86 E-value=1.1e-19 Score=139.13 Aligned_cols=214 Identities=12% Similarity=0.039 Sum_probs=123.6
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
.||++||.+. + ...|...++.|.++ ||.|+++|+||.+.+..+ ..+++..+.+..+.+..
T Consensus 5 ~vvllHG~~~---~--~~~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---------- 68 (255)
T PLN02965 5 HFVFVHGASH---G--AWCWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---------- 68 (255)
T ss_pred EEEEECCCCC---C--cCcHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc----------
Confidence 5899999652 2 33388888999765 999999999998765432 23555555555555543
Q ss_pred CC-CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC--CCcccc----------cc--cC--CCCcc
Q 041117 79 DL-KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE--RTQSEE----------DL--ND--ITPLV 141 (249)
Q Consensus 79 ~~-~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~----------~~--~~--~~~~~ 141 (249)
+. ++++++||||||.+++.++.++ +.++++++++++...... ...... .. .. ..+..
T Consensus 69 ~~~~~~~lvGhSmGG~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
T PLN02965 69 PPDHKVILVGHSIGGGSVTEALCKF------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPT 142 (255)
T ss_pred CCCCCEEEEecCcchHHHHHHHHhC------chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcc
Confidence 33 5899999999999999999984 447889998876521110 000000 00 00 00000
Q ss_pred chhhHHHHH-HhhCCCCC------------CCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCC
Q 041117 142 SLRRSDWMW-TAFLPEGT------------DRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHG 208 (249)
Q Consensus 142 ~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~ 208 (249)
......... ..+..... ................+.. ...|+++++|++|.+++. ...+.+.+.-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~vP~lvi~g~~D~~~~~--~~~~~~~~~~ 219 (255)
T PLN02965 143 GIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEA-EKVPRVYIKTAKDNLFDP--VRQDVMVENW 219 (255)
T ss_pred hhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhc-CCCCEEEEEcCCCCCCCH--HHHHHHHHhC
Confidence 000000011 00000000 0000000000001111212 234699999999999973 4445555555
Q ss_pred CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 209 KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 209 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
.+.++++++++||......+ +++.+.+.+|++.
T Consensus 220 ~~a~~~~i~~~GH~~~~e~p---~~v~~~l~~~~~~ 252 (255)
T PLN02965 220 PPAQTYVLEDSDHSAFFSVP---TTLFQYLLQAVSS 252 (255)
T ss_pred CcceEEEecCCCCchhhcCH---HHHHHHHHHHHHH
Confidence 57889999999997665544 8888888888765
No 23
>PRK10115 protease 2; Provisional
Probab=99.85 E-value=3.1e-20 Score=158.62 Aligned_cols=217 Identities=17% Similarity=0.134 Sum_probs=144.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----------CCCchhhHHHHHHHHHhhcc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----------YPSQYDDGIDVLKFIDTKIS 69 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~ 69 (249)
.|+||++|||. +......|......|+++ |++|+.+++||+.+.+ ....++|+.++++||.+..-
T Consensus 445 ~P~ll~~hGg~---~~~~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~ 520 (686)
T PRK10115 445 NPLLVYGYGSY---GASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGY 520 (686)
T ss_pred CCEEEEEECCC---CCCCCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Confidence 49999999965 344444466667788886 9999999999986543 23568999999999987764
Q ss_pred CCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHH
Q 041117 70 TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWM 149 (249)
Q Consensus 70 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (249)
.++++++++|.|+||.++...+.+ .|..++++|...|+++......... .+.... .
T Consensus 521 --------~d~~rl~i~G~S~GG~l~~~~~~~------~Pdlf~A~v~~vp~~D~~~~~~~~~-----~p~~~~-----~ 576 (686)
T PRK10115 521 --------GSPSLCYGMGGSAGGMLMGVAINQ------RPELFHGVIAQVPFVDVVTTMLDES-----IPLTTG-----E 576 (686)
T ss_pred --------CChHHeEEEEECHHHHHHHHHHhc------ChhheeEEEecCCchhHhhhcccCC-----CCCChh-----H
Confidence 689999999999999999998887 4458999999999998754321100 000000 0
Q ss_pred HHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEe---CCCceeee
Q 041117 150 WTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEY---PNAVHGFY 224 (249)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~---~~~~H~~~ 224 (249)
+..+-..........+..++|.. .+.+...|++||++|.+|.-|+ ++.+++.+|++.+.+++++++ ++.||+..
T Consensus 577 ~~e~G~p~~~~~~~~l~~~SP~~-~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 577 FEEWGNPQDPQYYEYMKSYSPYD-NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred HHHhCCCCCHHHHHHHHHcCchh-ccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 11111000000011111223322 3333466778899999998885 479999999999988888888 99999722
Q ss_pred ecCCCChhHHHHHHHHHHHhhhc
Q 041117 225 IFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 225 ~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
.+....-+.......||...++
T Consensus 656 -~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 656 -SGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred -cCHHHHHHHHHHHHHHHHHHhC
Confidence 1111003344455677766554
No 24
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=1.5e-19 Score=135.74 Aligned_cols=173 Identities=16% Similarity=0.149 Sum_probs=114.4
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhC-CcEEEeecCCCC----CCCCC--------CCchhhHH-------HH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEI-PAVVISVNYRLA----PENRY--------PSQYDDGI-------DV 60 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~----~~~~~--------~~~~~d~~-------~~ 60 (249)
.|+||++||.| ++... +..+++.|.... .+.++.++-+.. +...+ ....+++. +.
T Consensus 16 ~~~vIlLHG~G---~~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 16 QQLLLLFHGVG---DNPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CcEEEEEeCCC---CChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 37899999955 33333 778888887652 245555553211 11111 11112222 23
Q ss_pred HHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCc
Q 041117 61 LKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPL 140 (249)
Q Consensus 61 ~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~ 140 (249)
++++.+.. +++.++++|+|+|+||.+++.++.+. +..+++++.+++.+.. .+
T Consensus 91 i~~~~~~~--------~~~~~~i~l~GfS~Gg~~al~~a~~~------~~~~~~vv~~sg~~~~-------------~~- 142 (232)
T PRK11460 91 VRYWQQQS--------GVGASATALIGFSQGAIMALEAVKAE------PGLAGRVIAFSGRYAS-------------LP- 142 (232)
T ss_pred HHHHHHhc--------CCChhhEEEEEECHHHHHHHHHHHhC------CCcceEEEEecccccc-------------cc-
Confidence 33333332 36778999999999999999988763 3356667766653210 00
Q ss_pred cchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCC
Q 041117 141 VSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPN 218 (249)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 218 (249)
. . . ...+|++++||++|+++| .+.++.+++++.+.+++++++++
T Consensus 143 -------------------~----~--------~---~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~ 188 (232)
T PRK11460 143 -------------------E----T--------A---PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVED 188 (232)
T ss_pred -------------------c----c--------c---cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 0 0 0 022579999999999997 35788999999999999999999
Q ss_pred CceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 219 AVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 219 ~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
++|.+. .+.++.+.+||.+.+.
T Consensus 189 ~gH~i~-------~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 189 LGHAID-------PRLMQFALDRLRYTVP 210 (232)
T ss_pred CCCCCC-------HHHHHHHHHHHHHHcc
Confidence 999765 7889999999998875
No 25
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.84 E-value=1.2e-19 Score=140.55 Aligned_cols=213 Identities=15% Similarity=0.075 Sum_probs=121.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC----CCchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY----PSQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|+||++||.+ ++ ...|..+++.|++ +|.|+++|+|+.+.... ...+++..+.+..+.+..
T Consensus 29 ~~vv~~hG~~---~~--~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~--------- 92 (278)
T TIGR03056 29 PLLLLLHGTG---AS--THSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE--------- 92 (278)
T ss_pred CeEEEEcCCC---CC--HHHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc---------
Confidence 7899999954 23 3337888888865 69999999999775543 234566666666665543
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcc-----cccccCCCCccc---------h
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQS-----EEDLNDITPLVS---------L 143 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~-----~~~~~~~~~~~~---------~ 143 (249)
+.++++|+|||+||.+++.++.+. +.++++++++++.......... ........+... .
T Consensus 93 -~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (278)
T TIGR03056 93 -GLSPDGVIGHSAGAAIALRLALDG------PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQ 165 (278)
T ss_pred -CCCCceEEEECccHHHHHHHHHhC------CcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccC
Confidence 346899999999999999999874 3467888888765432111000 000000000000 0
Q ss_pred hhHHHHHHhhCCCCCC-----------CCCC------CCC--CCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHH
Q 041117 144 RRSDWMWTAFLPEGTD-----------RDYP------AAN--TFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGL 204 (249)
Q Consensus 144 ~~~~~~~~~~~~~~~~-----------~~~~------~~~--~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l 204 (249)
.....+.......... .... ... ........+.+.. .|+++++|++|.+++. ...+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~g~~D~~vp~--~~~~~~ 242 (278)
T TIGR03056 166 QRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRIT-IPLHLIAGEEDKAVPP--DESKRA 242 (278)
T ss_pred cchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCC-CCEEEEEeCCCcccCH--HHHHHH
Confidence 0000000000000000 0000 000 0000011222222 4799999999999973 233444
Q ss_pred HHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 205 KRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 205 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
.+...++++++++++||.+....+ +++.+.+.+|++
T Consensus 243 ~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~f~~ 278 (278)
T TIGR03056 243 ATRVPTATLHVVPGGGHLVHEEQA---DGVVGLILQAAE 278 (278)
T ss_pred HHhccCCeEEEECCCCCcccccCH---HHHHHHHHHHhC
Confidence 444447889999999997665433 889999999874
No 26
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=5.1e-20 Score=143.87 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=73.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCC---chhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPS---QYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
|+||++||.+ ++ ...|..+++.|+++ + .|+++|.|+.+....+. ..++..+.+..+.+..
T Consensus 28 ~~vvllHG~~---~~--~~~w~~~~~~L~~~-~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l---------- 90 (295)
T PRK03592 28 DPIVFLHGNP---TS--SYLWRNIIPHLAGL-G-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL---------- 90 (295)
T ss_pred CEEEEECCCC---CC--HHHHHHHHHHHhhC-C-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----------
Confidence 6899999954 23 34488889999875 4 99999999987665432 3455555555555543
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+.++++++|||+||.+|+.++.++ +.++++++++++..
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lil~~~~~ 128 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARH------PDRVRGIAFMEAIV 128 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhC------hhheeEEEEECCCC
Confidence 457899999999999999999984 45899999998743
No 27
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.84 E-value=2.7e-19 Score=136.69 Aligned_cols=212 Identities=16% Similarity=0.156 Sum_probs=118.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|+||++||.+ ++. ..|...++.+.+ +|.|+++|+|+.+....+ ..+++..+.+..+.+..
T Consensus 14 ~~iv~lhG~~---~~~--~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~--------- 77 (257)
T TIGR03611 14 PVVVLSSGLG---GSG--SYWAPQLDVLTQ--RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL--------- 77 (257)
T ss_pred CEEEEEcCCC---cch--hHHHHHHHHHHh--ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---------
Confidence 7899999955 232 337777776654 799999999987655322 23444444444444433
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc----c---cCCCCccchhh----H
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED----L---NDITPLVSLRR----S 146 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~----~---~~~~~~~~~~~----~ 146 (249)
+..+++++|||+||.+|+.++.+. +..++++|+++++............ . .....+..... .
T Consensus 78 -~~~~~~l~G~S~Gg~~a~~~a~~~------~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 78 -NIERFHFVGHALGGLIGLQLALRY------PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred -CCCcEEEEEechhHHHHHHHHHHC------hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 457899999999999999999874 3378999998876543221110000 0 00000000000 0
Q ss_pred HHHHHhhCCC----CC---CCCCCC---------CCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCc
Q 041117 147 DWMWTAFLPE----GT---DRDYPA---------ANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKE 210 (249)
Q Consensus 147 ~~~~~~~~~~----~~---~~~~~~---------~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~ 210 (249)
..+....... .. ...... ..... ....+... ..|+++++|++|.+++.. .++.+.+.-.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i-~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~ 226 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFD-VSARLDRI-QHPVLLIANRDDMLVPYT--QSLRLAAALPN 226 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCC-cHHHhccc-CccEEEEecCcCcccCHH--HHHHHHHhcCC
Confidence 0000000000 00 000000 00000 01122222 357999999999998632 22333333346
Q ss_pred eEEEEeCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 211 AYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 211 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
.+++.++++||......+ +++.+.+.+||+
T Consensus 227 ~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~ 256 (257)
T TIGR03611 227 AQLKLLPYGGHASNVTDP---ETFNRALLDFLK 256 (257)
T ss_pred ceEEEECCCCCCccccCH---HHHHHHHHHHhc
Confidence 789999999997654333 888999999985
No 28
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=2.4e-19 Score=145.16 Aligned_cols=212 Identities=13% Similarity=0.080 Sum_probs=121.4
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
+|+||++||.+ +.....|..++..|+++ ||+|+++|+|+.++.... ........+++++.....
T Consensus 194 ~P~Vli~gG~~----~~~~~~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~------- 261 (414)
T PRK05077 194 FPTVLVCGGLD----SLQTDYYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPW------- 261 (414)
T ss_pred ccEEEEeCCcc----cchhhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcc-------
Confidence 36777665532 22223366778888875 999999999987654321 111222356677765542
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPE 156 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (249)
++.++|+++|||+||++|+.+|.. .+.+++++|+++|.++.......... . . .....+.+...+ ..
T Consensus 262 -vd~~ri~l~G~S~GG~~Al~~A~~------~p~ri~a~V~~~~~~~~~~~~~~~~~--~-~---p~~~~~~la~~l-g~ 327 (414)
T PRK05077 262 -VDHTRVAAFGFRFGANVAVRLAYL------EPPRLKAVACLGPVVHTLLTDPKRQQ--Q-V---PEMYLDVLASRL-GM 327 (414)
T ss_pred -cCcccEEEEEEChHHHHHHHHHHh------CCcCceEEEEECCccchhhcchhhhh--h-c---hHHHHHHHHHHh-CC
Confidence 678999999999999999999986 34479999999988642111100000 0 0 000001111110 00
Q ss_pred CCCCCC---CCCCCCCCCc-cccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChh
Q 041117 157 GTDRDY---PAANTFGKHA-VDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEG 232 (249)
Q Consensus 157 ~~~~~~---~~~~~~~~~~-~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 232 (249)
...... .....++... ..+......|+|+++|++|+++|. ...+.+.+...+.++++++++.| +. .. +
T Consensus 328 ~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~--~~a~~l~~~~~~~~l~~i~~~~~-~e---~~--~ 399 (414)
T PRK05077 328 HDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPE--EDSRLIASSSADGKLLEIPFKPV-YR---NF--D 399 (414)
T ss_pred CCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCH--HHHHHHHHhCCCCeEEEccCCCc-cC---CH--H
Confidence 000000 0000000000 001111224799999999999973 33345455555788999998632 11 11 8
Q ss_pred HHHHHHHHHHHhhh
Q 041117 233 SFIDDVGNFIRDQS 246 (249)
Q Consensus 233 ~~~~~~~~fl~~~~ 246 (249)
++++.+.+||++++
T Consensus 400 ~~~~~i~~wL~~~l 413 (414)
T PRK05077 400 KALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=1.6e-19 Score=137.22 Aligned_cols=214 Identities=15% Similarity=0.132 Sum_probs=118.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC---CchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP---SQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
.|+||++||.|. + ...|..+++.|.. ||.|+++|+++++....+ ..+++..+.+..+.+..
T Consensus 13 ~~~li~~hg~~~---~--~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~--------- 76 (251)
T TIGR02427 13 APVLVFINSLGT---D--LRMWDPVLPALTP--DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL--------- 76 (251)
T ss_pred CCeEEEEcCccc---c--hhhHHHHHHHhhc--ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------
Confidence 378999999552 2 2236777777753 899999999998665433 23455555555555443
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEG 157 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (249)
+.++++++|||+||.+++.+|.+. +..+++++++++................................+....
T Consensus 77 -~~~~v~liG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (251)
T TIGR02427 77 -GIERAVFCGLSLGGLIAQGLAARR------PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPG 149 (251)
T ss_pred -CCCceEEEEeCchHHHHHHHHHHC------HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccc
Confidence 457899999999999999999873 4478999988765432211100000000000000000000000000000
Q ss_pred CC-CC--------------C----C-CCCCCC--CCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEE
Q 041117 158 TD-RD--------------Y----P-AANTFG--KHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIE 215 (249)
Q Consensus 158 ~~-~~--------------~----~-~~~~~~--~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~ 215 (249)
.. .. . . ...... .....+.+.. .|+++++|++|.+++.. ..+.+.+...+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Pvlii~g~~D~~~~~~--~~~~~~~~~~~~~~~~ 226 (251)
T TIGR02427 150 FREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIA-VPTLCIAGDQDGSTPPE--LVREIADLVPGARFAE 226 (251)
T ss_pred cccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcC-CCeEEEEeccCCcCChH--HHHHHHHhCCCceEEE
Confidence 00 00 0 0 000000 0001122222 46999999999999732 2333443334678999
Q ss_pred eCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 216 YPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 216 ~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
+++++|......+ +++.+.+.+|++
T Consensus 227 ~~~~gH~~~~~~p---~~~~~~i~~fl~ 251 (251)
T TIGR02427 227 IRGAGHIPCVEQP---EAFNAALRDFLR 251 (251)
T ss_pred ECCCCCcccccCh---HHHHHHHHHHhC
Confidence 9999997665443 788888888873
No 30
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=4.9e-19 Score=135.04 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=114.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC-CCCC-------CCCchhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA-PENR-------YPSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-~~~~-------~~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|+||++||-+ +.. ..+..+++.|+++ ||.|+.+|+|++ +++. ......|+..+++|+++..
T Consensus 38 ~~vIi~HGf~---~~~--~~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~----- 106 (307)
T PRK13604 38 NTILIASGFA---RRM--DHFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG----- 106 (307)
T ss_pred CEEEEeCCCC---CCh--HHHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcC-----
Confidence 6899999943 222 2378899999985 999999998764 3321 3345789999999997642
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC-CCCccch---------
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND-ITPLVSL--------- 143 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~--------- 143 (249)
.++++|+||||||.+|+..|.. .+++++|+.||+.+............. ..++...
T Consensus 107 ------~~~I~LiG~SmGgava~~~A~~--------~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~ 172 (307)
T PRK13604 107 ------INNLGLIAASLSARIAYEVINE--------IDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGH 172 (307)
T ss_pred ------CCceEEEEECHHHHHHHHHhcC--------CCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccc
Confidence 3689999999999998766653 148999999999875421111000000 0000000
Q ss_pred hh-HHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCc
Q 041117 144 RR-SDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAV 220 (249)
Q Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~ 220 (249)
.. ...+.+........ ....+. ....... .|+|++||++|.++|. +.++.+.++. .++++++++|++
T Consensus 173 ~l~~~~f~~~~~~~~~~---~~~s~i----~~~~~l~-~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~ 242 (307)
T PRK13604 173 NLGSEVFVTDCFKHGWD---TLDSTI----NKMKGLD-IPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSS 242 (307)
T ss_pred cccHHHHHHHHHhcCcc---ccccHH----HHHhhcC-CCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCc
Confidence 00 01222111000000 001110 1122223 4699999999999974 3555555442 478999999999
Q ss_pred eeee
Q 041117 221 HGFY 224 (249)
Q Consensus 221 H~~~ 224 (249)
|.+.
T Consensus 243 H~l~ 246 (307)
T PRK13604 243 HDLG 246 (307)
T ss_pred cccC
Confidence 9766
No 31
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=2.3e-19 Score=143.54 Aligned_cols=217 Identities=13% Similarity=0.098 Sum_probs=123.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|+||++||.+ ++ ...|..++..|++ +|.|+++|++|.+....+ ..+++..+.+..+.+..
T Consensus 89 p~lvllHG~~---~~--~~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l--------- 152 (360)
T PLN02679 89 PPVLLVHGFG---AS--IPHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV--------- 152 (360)
T ss_pred CeEEEECCCC---CC--HHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh---------
Confidence 7899999955 22 3348888888865 799999999998765433 23445444444444433
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC--ccccc-cc-C---------CCCccc--
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT--QSEED-LN-D---------ITPLVS-- 142 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~--~~~~~-~~-~---------~~~~~~-- 142 (249)
+.++++|+|||+||.+++.++... .+.+++++|+++|........ ..... .. . ..+...
T Consensus 153 -~~~~~~lvGhS~Gg~ia~~~a~~~-----~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PLN02679 153 -VQKPTVLIGNSVGSLACVIAASES-----TRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASA 226 (360)
T ss_pred -cCCCeEEEEECHHHHHHHHHHHhc-----ChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHH
Confidence 457999999999999999888642 344799999998754221100 00000 00 0 000000
Q ss_pred -------hhhHHHHHHhhCCCCCC-------------CCCCCCC----CC----CC-CccccccCCCCcEEEEecCCCcc
Q 041117 143 -------LRRSDWMWTAFLPEGTD-------------RDYPAAN----TF----GK-HAVDISRVDIPATIVIVGGFDPL 193 (249)
Q Consensus 143 -------~~~~~~~~~~~~~~~~~-------------~~~~~~~----~~----~~-~~~~~~~~~~pP~li~~g~~D~~ 193 (249)
......++......... ....... .. .. ....+.+.. .|+||++|++|.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PtLii~G~~D~~ 305 (360)
T PLN02679 227 LFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRIS-LPILVLWGDQDPF 305 (360)
T ss_pred HHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcC-CCEEEEEeCCCCC
Confidence 00011111110000000 0000000 00 00 011222222 4699999999998
Q ss_pred hhhHH---HHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 194 KDWQK---RHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 194 ~~~~~---~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
++... ++.+.+.+.-.++++++++++||......+ +++.+.+.+||++
T Consensus 306 ~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P---e~~~~~I~~FL~~ 356 (360)
T PLN02679 306 TPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP---DLVHEKLLPWLAQ 356 (360)
T ss_pred cCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH---HHHHHHHHHHHHh
Confidence 86432 344556555567999999999996554333 8999999999976
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.83 E-value=3.2e-19 Score=138.53 Aligned_cols=214 Identities=16% Similarity=0.146 Sum_probs=115.1
Q ss_pred CEEEEEecCccccCCCCccchh---HHHHHHHHhCCcEEEeecCCCCCCCCCCC--c--hhhHHHHHHHHHhhccCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYD---DHCRRLAKEIPAVVISVNYRLAPENRYPS--Q--YDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~---~~~~~l~~~~g~~v~~~d~r~~~~~~~~~--~--~~d~~~~~~~l~~~~~~~~~~ 74 (249)
|+||++||.|. +.. .|. ..+..++++ ||.|+++|+||.+...... . .....+.+..+.+..
T Consensus 31 ~~ivllHG~~~---~~~--~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------ 98 (282)
T TIGR03343 31 EAVIMLHGGGP---GAG--GWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL------ 98 (282)
T ss_pred CeEEEECCCCC---chh--hHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc------
Confidence 68999999552 222 133 334556654 8999999999987654321 1 111222333333332
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC---c-cc-ccccC--CCCc-------
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT---Q-SE-EDLND--ITPL------- 140 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~---~-~~-~~~~~--~~~~------- 140 (249)
+.++++++|||+||.+++.++.++ +.+++++++++|........ + .. ..... ....
T Consensus 99 ----~~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (282)
T TIGR03343 99 ----DIEKAHLVGNSMGGATALNFALEY------PDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (282)
T ss_pred ----CCCCeeEEEECchHHHHHHHHHhC------hHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHH
Confidence 567999999999999999999984 44789999988753211100 0 00 00000 0000
Q ss_pred ----------cchhhHHHHHHhhCCCCCC-CC---CCCCCCCC--CCccccccCCCCcEEEEecCCCcchhhHHHHHHHH
Q 041117 141 ----------VSLRRSDWMWTAFLPEGTD-RD---YPAANTFG--KHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGL 204 (249)
Q Consensus 141 ----------~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~--~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l 204 (249)
.........+......... .. ........ .....+.... .|+|+++|++|.+++. ..++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlli~G~~D~~v~~--~~~~~~ 245 (282)
T TIGR03343 169 LNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIK-AKTLVTWGRDDRFVPL--DHGLKL 245 (282)
T ss_pred HhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCC-CCEEEEEccCCCcCCc--hhHHHH
Confidence 0000000000000000000 00 00000000 0011222223 3699999999999862 333444
Q ss_pred HHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 205 KRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 205 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
.+.-.++++++++++||......+ +.+.+.+.+||+
T Consensus 246 ~~~~~~~~~~~i~~agH~~~~e~p---~~~~~~i~~fl~ 281 (282)
T TIGR03343 246 LWNMPDAQLHVFSRCGHWAQWEHA---DAFNRLVIDFLR 281 (282)
T ss_pred HHhCCCCEEEEeCCCCcCCcccCH---HHHHHHHHHHhh
Confidence 444458999999999997554433 888999999986
No 33
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.9e-20 Score=128.94 Aligned_cols=177 Identities=18% Similarity=0.204 Sum_probs=128.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-CCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-RYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
|++||+|||-|..|.+.. ....+..... +||+|.+++|.++++. .....+.++...++|+.+... +.
T Consensus 68 klfIfIHGGYW~~g~rk~--clsiv~~a~~-~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~---------n~ 135 (270)
T KOG4627|consen 68 KLFIFIHGGYWQEGDRKM--CLSIVGPAVR-RGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTE---------NT 135 (270)
T ss_pred cEEEEEecchhhcCchhc--ccchhhhhhh-cCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcc---------cc
Confidence 689999999998887655 3455555555 5999999999999986 778889999999999998875 66
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
+.+.+.|||+|+++|++...+. ..+++.|++++|++++..+......-. ....
T Consensus 136 k~l~~gGHSaGAHLa~qav~R~-----r~prI~gl~l~~GvY~l~EL~~te~g~----------------------dlgL 188 (270)
T KOG4627|consen 136 KVLTFGGHSAGAHLAAQAVMRQ-----RSPRIWGLILLCGVYDLRELSNTESGN----------------------DLGL 188 (270)
T ss_pred eeEEEcccchHHHHHHHHHHHh-----cCchHHHHHHHhhHhhHHHHhCCcccc----------------------ccCc
Confidence 7899999999999999999885 456899999999998765543222110 0001
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCCCc--chhhHHHHHHHHHHCCCceEEEEeCCCcee
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGFDP--LKDWQKRHYQGLKRHGKEAYLIEYPNAVHG 222 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 222 (249)
....+...+...+.++...+ |+||+.+++|. ++.+++.++..+++ ..+..+++.+|-
T Consensus 189 t~~~ae~~Scdl~~~~~v~~-~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 189 TERNAESVSCDLWEYTDVTV-WILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred ccchhhhcCccHHHhcCcee-eeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchh
Confidence 11111111222223332334 49999999994 56778888888874 678899999993
No 34
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.83 E-value=3.9e-19 Score=124.26 Aligned_cols=143 Identities=28% Similarity=0.373 Sum_probs=102.2
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKR 82 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~ 82 (249)
+||++||++ ++ ...|..+++.++++ ||.|+.+|+++.... ....++.+.++++.... .+.++
T Consensus 1 ~vv~~HG~~---~~--~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWG---GS--RRDYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY---------PDPDR 62 (145)
T ss_dssp EEEEECTTT---TT--THHHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH---------CTCCE
T ss_pred CEEEECCCC---CC--HHHHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc---------CCCCc
Confidence 689999976 23 33388999999997 999999999986654 33345666666654333 26789
Q ss_pred eEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCCCC
Q 041117 83 CFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDRDY 162 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (249)
++++|||+||.+++.++.+. .+++++|+++|+.+ ..
T Consensus 63 i~l~G~S~Gg~~a~~~~~~~-------~~v~~~v~~~~~~~-------~~------------------------------ 98 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAARN-------PRVKAVVLLSPYPD-------SE------------------------------ 98 (145)
T ss_dssp EEEEEETHHHHHHHHHHHHS-------TTESEEEEESESSG-------CH------------------------------
T ss_pred EEEEEEccCcHHHHHHhhhc-------cceeEEEEecCccc-------hh------------------------------
Confidence 99999999999999999963 48999999988310 00
Q ss_pred CCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCcee
Q 041117 163 PAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHG 222 (249)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~ 222 (249)
.+.. ...|+++++|++|.+++. ..++.++++ .+.+++++++++|+
T Consensus 99 -----------~~~~-~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 -----------DLAK-IRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------HHTT-TTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred -----------hhhc-cCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 0000 113699999999999863 244444444 57999999999994
No 35
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.83 E-value=2.2e-19 Score=134.07 Aligned_cols=180 Identities=19% Similarity=0.173 Sum_probs=118.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC--CCC----------------CCchhhHHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE--NRY----------------PSQYDDGIDVLK 62 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~~~----------------~~~~~d~~~~~~ 62 (249)
.|.||++|+ +.|-. .....++++|+++ ||.|++||+-.... ... ....+|+..+++
T Consensus 14 ~~~Vvv~~d---~~G~~--~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 14 RPAVVVIHD---IFGLN--PNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp EEEEEEE-B---TTBS---HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEEcC---CCCCc--hHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 379999999 22222 3367889999986 99999999753322 110 012345566777
Q ss_pred HHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccc
Q 041117 63 FIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVS 142 (249)
Q Consensus 63 ~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 142 (249)
+|.+... .+.++|.++|+|+||.+++.++.+. ..+++++.++|.... ...
T Consensus 88 ~l~~~~~--------~~~~kig~vGfc~GG~~a~~~a~~~-------~~~~a~v~~yg~~~~-----~~~---------- 137 (218)
T PF01738_consen 88 YLRAQPE--------VDPGKIGVVGFCWGGKLALLLAARD-------PRVDAAVSFYGGSPP-----PPP---------- 137 (218)
T ss_dssp HHHCTTT--------CEEEEEEEEEETHHHHHHHHHHCCT-------TTSSEEEEES-SSSG-----GGH----------
T ss_pred HHHhccc--------cCCCcEEEEEEecchHHhhhhhhhc-------cccceEEEEcCCCCC-----Ccc----------
Confidence 7776653 5678999999999999999988752 378999998881000 000
Q ss_pred hhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCCCceEEEEeCCCc
Q 041117 143 LRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHGKEAYLIEYPNAV 220 (249)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ 220 (249)
.. ... ....|+++++|++|+.++.. ..+.+.+++.+.++++++|+|++
T Consensus 138 ---~~--------------------------~~~-~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~ 187 (218)
T PF01738_consen 138 ---LE--------------------------DAP-KIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAG 187 (218)
T ss_dssp ---HH--------------------------HGG-G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--
T ss_pred ---hh--------------------------hhc-ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCc
Confidence 00 001 02257999999999988643 67888888889999999999999
Q ss_pred eeeeecCCCC---h--hHHHHHHHHHHHhhh
Q 041117 221 HGFYIFPELH---E--GSFIDDVGNFIRDQS 246 (249)
Q Consensus 221 H~~~~~~~~~---~--~~~~~~~~~fl~~~~ 246 (249)
|+|......+ . ++.++++.+||+++|
T Consensus 188 HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 188 HGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred ccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 9998765441 2 889999999999875
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.82 E-value=3e-19 Score=135.52 Aligned_cols=213 Identities=13% Similarity=0.113 Sum_probs=120.4
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCC-----chhhHHHH-HHHHHhhccCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPS-----QYDDGIDV-LKFIDTKISTVEDF 74 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~-~~~l~~~~~~~~~~ 74 (249)
.|+||++||.+ ++. ..|..+++.|+ + |+.|+++|+++.+....+. .+++..+. +..+.+.
T Consensus 1 ~~~vv~~hG~~---~~~--~~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------- 66 (251)
T TIGR03695 1 KPVLVFLHGFL---GSG--ADWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ------- 66 (251)
T ss_pred CCEEEEEcCCC---Cch--hhHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH-------
Confidence 38999999954 233 33888889887 4 9999999999876654322 23333333 3434333
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCC---CCc-----------
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDI---TPL----------- 140 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~---~~~----------- 140 (249)
.+.++++++|||+||.+|+.++.+.+ ..+++++++++................. ...
T Consensus 67 ---~~~~~~~l~G~S~Gg~ia~~~a~~~~------~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (251)
T TIGR03695 67 ---LGIEPFFLVGYSMGGRIALYYALQYP------ERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLD 137 (251)
T ss_pred ---cCCCeEEEEEeccHHHHHHHHHHhCc------hheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHH
Confidence 25578999999999999999999843 4688999888765432211000000000 000
Q ss_pred -------------cchhhHHHHHHhhCCCCCCCC-CC----CCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHH
Q 041117 141 -------------VSLRRSDWMWTAFLPEGTDRD-YP----AANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQ 202 (249)
Q Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~ 202 (249)
........+............ .. ...........+.. ...|+++++|++|..++ ...+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~---~~~~ 213 (251)
T TIGR03695 138 DWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQA-LTIPVLYLCGEKDEKFV---QIAK 213 (251)
T ss_pred HHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhC-CCCceEEEeeCcchHHH---HHHH
Confidence 000000000000000000000 00 00000000011221 23579999999998764 2345
Q ss_pred HHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 203 GLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
.+.+...++++++++++||......+ +++.+.+.+|++
T Consensus 214 ~~~~~~~~~~~~~~~~~gH~~~~e~~---~~~~~~i~~~l~ 251 (251)
T TIGR03695 214 EMQKLLPNLTLVIIANAGHNIHLENP---EAFAKILLAFLE 251 (251)
T ss_pred HHHhcCCCCcEEEEcCCCCCcCccCh---HHHHHHHHHHhC
Confidence 55655567899999999997665443 788888888873
No 37
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.82 E-value=6.5e-19 Score=134.77 Aligned_cols=213 Identities=14% Similarity=0.066 Sum_probs=120.4
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC--CchhhHHHHHHHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP--SQYDDGIDVLKFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 79 (249)
|+||++||.+ ++. ..|..++..|++ +|.|+.+|.|+.+....+ ..+++..+.+..+.+.. +
T Consensus 17 ~~iv~lhG~~---~~~--~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----------~ 79 (255)
T PRK10673 17 SPIVLVHGLF---GSL--DNLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----------Q 79 (255)
T ss_pred CCEEEECCCC---Cch--hHHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----------C
Confidence 7899999954 333 347888888875 799999999997655432 23344444333333333 4
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC-CCCC-CCcccc----cccCCCCccchhhHHHHHHhh
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF-GGEE-RTQSEE----DLNDITPLVSLRRSDWMWTAF 153 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~-~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 153 (249)
.++++|+|||+||.+++.+|.+. +.++++++++++.. .... ...... .... ............+...
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~------~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 152 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALA------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSE-AGATTRQQAAAIMRQH 152 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhC------HhhcceEEEEecCCCCccchhhHHHHHHHHHhhh-cccccHHHHHHHHHHh
Confidence 46899999999999999999874 44789988875321 1100 000000 0000 0000000000111100
Q ss_pred CC---------CCCCCCCCCCC------CCCC--CccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEe
Q 041117 154 LP---------EGTDRDYPAAN------TFGK--HAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEY 216 (249)
Q Consensus 154 ~~---------~~~~~~~~~~~------~~~~--~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~ 216 (249)
.. ........... .+.. ....+.. ...|+|+++|++|..++ ....+.+.+...+++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~ 229 (255)
T PRK10673 153 LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPA-WPHPALFIRGGNSPYVT--EAYRDDLLAQFPQARAHVI 229 (255)
T ss_pred cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCC-CCCCeEEEECCCCCCCC--HHHHHHHHHhCCCcEEEEe
Confidence 00 00000000000 0000 0001111 22479999999999886 4555666665568899999
Q ss_pred CCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 217 PNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 217 ~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
++++|......+ +++.+.+.+||.+
T Consensus 230 ~~~gH~~~~~~p---~~~~~~l~~fl~~ 254 (255)
T PRK10673 230 AGAGHWVHAEKP---DAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeeeccCH---HHHHHHHHHHHhc
Confidence 999996554333 7899999999975
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.82 E-value=5.9e-19 Score=139.33 Aligned_cols=224 Identities=13% Similarity=0.066 Sum_probs=127.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-------CCchhhHHHHHHHHHhhccCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-------PSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
|+||++||.+ |+........++..+.++ ||.|+++|+|++++... ....+|+..+++++.+..
T Consensus 59 p~vll~HG~~---g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~------ 128 (324)
T PRK10985 59 PRLVLFHGLE---GSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREF------ 128 (324)
T ss_pred CEEEEeCCCC---CCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhC------
Confidence 7999999943 333333245677788775 99999999999754321 234688888999988764
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC--CCCccchhhHHHH---
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND--ITPLVSLRRSDWM--- 149 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--- 149 (249)
+..+++++||||||.+++.++.+... ...+++++++++.++............. ....+........
T Consensus 129 ----~~~~~~~vG~S~GG~i~~~~~~~~~~----~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 200 (324)
T PRK10985 129 ----GHVPTAAVGYSLGGNMLACLLAKEGD----DLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARK 200 (324)
T ss_pred ----CCCCEEEEEecchHHHHHHHHHhhCC----CCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44689999999999998888876532 1247888888876654321110000000 0000000000000
Q ss_pred HHhhCCCCCCCCC--------------CCCCC---C---------CCCccccccCCCCcEEEEecCCCcchhhHHHHHHH
Q 041117 150 WTAFLPEGTDRDY--------------PAANT---F---------GKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQG 203 (249)
Q Consensus 150 ~~~~~~~~~~~~~--------------~~~~~---~---------~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~ 203 (249)
...+.. ....+. ....+ + ......+.+.. .|+++++|++|++++. ...+.
T Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~-~P~lii~g~~D~~~~~--~~~~~ 276 (324)
T PRK10985 201 LAAYPG-TLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIR-KPTLIIHAKDDPFMTH--EVIPK 276 (324)
T ss_pred HHhccc-cccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCC-CCEEEEecCCCCCCCh--hhChH
Confidence 000000 000000 00000 0 00111223222 4699999999998863 22233
Q ss_pred HHHCCCceEEEEeCCCceeeeecCCCC-h-hHHHHHHHHHHHhhhc
Q 041117 204 LKRHGKEAYLIEYPNAVHGFYIFPELH-E-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 204 l~~~~~~~~~~~~~~~~H~~~~~~~~~-~-~~~~~~~~~fl~~~~~ 247 (249)
+.+...++++.+++++||........+ . ...-+.+.+|++..++
T Consensus 277 ~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 277 PESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred HHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 344445789999999999866654322 2 6677778888876543
No 39
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.82 E-value=6.5e-19 Score=134.88 Aligned_cols=211 Identities=14% Similarity=0.101 Sum_probs=118.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
|+||++||.| ++ ...|..+++.|.+ .|.|+++|+|+.+....+.. ....+..+.+.+. ..+
T Consensus 14 ~~ivllHG~~---~~--~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~~-----------~~~ 74 (256)
T PRK10349 14 VHLVLLHGWG---LN--AEVWRCIDEELSS--HFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQQ-----------APD 74 (256)
T ss_pred CeEEEECCCC---CC--hhHHHHHHHHHhc--CCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHhc-----------CCC
Confidence 4699999955 22 3348888888865 69999999999876543322 2333444444432 347
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC--CCcccc-c-ccCCCCccc---hhhHHHHHHh-h
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE--RTQSEE-D-LNDITPLVS---LRRSDWMWTA-F 153 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~-~-~~~~~~~~~---~~~~~~~~~~-~ 153 (249)
+++++|||+||.+|+.+|.+ .+.+++++|++++...... ...... . .......+. ......+... .
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALT------HPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT 148 (256)
T ss_pred CeEEEEECHHHHHHHHHHHh------ChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 89999999999999999987 4458999998876432111 000000 0 000000000 0001111100 0
Q ss_pred CCCCC-------------CCCCCCC-------CCC--CCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCce
Q 041117 154 LPEGT-------------DRDYPAA-------NTF--GKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEA 211 (249)
Q Consensus 154 ~~~~~-------------~~~~~~~-------~~~--~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~ 211 (249)
..... ....... ... ......+.+.. .|+|+++|++|.+++ ....+.+++.-.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P~lii~G~~D~~~~--~~~~~~~~~~i~~~ 225 (256)
T PRK10349 149 MGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVS-MPFLRLYGYLDGLVP--RKVVPMLDKLWPHS 225 (256)
T ss_pred ccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcC-CCeEEEecCCCccCC--HHHHHHHHHhCCCC
Confidence 00000 0000000 000 00111232223 469999999999886 33445555555588
Q ss_pred EEEEeCCCceeeeecCCCChhHHHHHHHHHHH
Q 041117 212 YLIEYPNAVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 212 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
++++++++||......+ +.+.+.+.+|-.
T Consensus 226 ~~~~i~~~gH~~~~e~p---~~f~~~l~~~~~ 254 (256)
T PRK10349 226 ESYIFAKAAHAPFISHP---AEFCHLLVALKQ 254 (256)
T ss_pred eEEEeCCCCCCccccCH---HHHHHHHHHHhc
Confidence 99999999996554433 788888887743
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.82 E-value=5.2e-19 Score=133.97 Aligned_cols=210 Identities=15% Similarity=0.083 Sum_probs=116.4
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
|+||++||.| ++ ...|..+++.|++ ++.|+++|+|+.+...... ..++.+..+.+.+.. .+
T Consensus 5 ~~iv~~HG~~---~~--~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~-----------~~ 65 (245)
T TIGR01738 5 VHLVLIHGWG---MN--AEVFRCLDEELSA--HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA-----------PD 65 (245)
T ss_pred ceEEEEcCCC---Cc--hhhHHHHHHhhcc--CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC-----------CC
Confidence 7899999954 23 3347788888865 7999999999877643322 234445555554433 26
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccc--c---cccCCCCccch---hhHHHHHH-h
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSE--E---DLNDITPLVSL---RRSDWMWT-A 152 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~--~---~~~~~~~~~~~---~~~~~~~~-~ 152 (249)
+++++|||+||.+++.++.+++ ..++++|++++........... . ........+.. .....+.. .
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p------~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHP------DRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ 139 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCH------HhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 8999999999999999998743 4688998887654221110000 0 00000000000 00000000 0
Q ss_pred hCCCCCCC-------------CCC----CCC---CCC--CCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCc
Q 041117 153 FLPEGTDR-------------DYP----AAN---TFG--KHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKE 210 (249)
Q Consensus 153 ~~~~~~~~-------------~~~----~~~---~~~--~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~ 210 (249)
........ ... ... ... .....+.+ ...|+++++|++|.+++.. ..+.+.+...+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlii~g~~D~~~~~~--~~~~~~~~~~~ 216 (245)
T TIGR01738 140 TLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQN-ISVPFLRLYGYLDGLVPAK--VVPYLDKLAPH 216 (245)
T ss_pred HhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhc-CCCCEEEEeecCCcccCHH--HHHHHHHhCCC
Confidence 00000000 000 000 000 00112222 2347999999999999732 22333333447
Q ss_pred eEEEEeCCCceeeeecCCCChhHHHHHHHHHH
Q 041117 211 AYLIEYPNAVHGFYIFPELHEGSFIDDVGNFI 242 (249)
Q Consensus 211 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl 242 (249)
+++++++++||......+ +++.+.+.+|+
T Consensus 217 ~~~~~~~~~gH~~~~e~p---~~~~~~i~~fi 245 (245)
T TIGR01738 217 SELYIFAKAAHAPFLSHA---EAFCALLVAFK 245 (245)
T ss_pred CeEEEeCCCCCCccccCH---HHHHHHHHhhC
Confidence 899999999997555433 88888888885
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.81 E-value=8.4e-19 Score=136.19 Aligned_cols=214 Identities=19% Similarity=0.175 Sum_probs=121.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|+||++||.+ .....|..++..|.+ +|.|+++|+++.+....+ ..+++..+.+..+.+..
T Consensus 35 ~~iv~lHG~~-----~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~--------- 98 (286)
T PRK03204 35 PPILLCHGNP-----TWSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL--------- 98 (286)
T ss_pred CEEEEECCCC-----ccHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh---------
Confidence 7899999954 223347777887764 799999999997655432 34577777777777654
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCc-ccc-cccCCCCccchhh-HHHHHHhhC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQ-SEE-DLNDITPLVSLRR-SDWMWTAFL 154 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~~ 154 (249)
+.++++++|||+||.+++.++..+ +.+++++|++++......... ... ......+...... ...+...+.
T Consensus 99 -~~~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (286)
T PRK03204 99 -GLDRYLSMGQDWGGPISMAVAVER------ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLI 171 (286)
T ss_pred -CCCCEEEEEECccHHHHHHHHHhC------hhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhc
Confidence 457899999999999999999874 447899988776542111000 000 0000000000000 000000000
Q ss_pred CCCC--CCCC----CCC----------------CCCCC-------Ccccccc-CCCCcEEEEecCCCcchhhHHHHHHHH
Q 041117 155 PEGT--DRDY----PAA----------------NTFGK-------HAVDISR-VDIPATIVIVGGFDPLKDWQKRHYQGL 204 (249)
Q Consensus 155 ~~~~--~~~~----~~~----------------~~~~~-------~~~~~~~-~~~pP~li~~g~~D~~~~~~~~~~~~l 204 (249)
.... ..+. ... ..+.. ....+.. ....|+++++|++|.+++. ....+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~-~~~~~~~ 250 (286)
T PRK03204 172 PAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRP-KTILPRL 250 (286)
T ss_pred cccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCc-HHHHHHH
Confidence 0000 0000 000 00000 0000110 1146799999999988742 2233444
Q ss_pred HHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHH
Q 041117 205 KRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFI 242 (249)
Q Consensus 205 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl 242 (249)
++.-.+.++++++++||......+ +++.+.+.+||
T Consensus 251 ~~~ip~~~~~~i~~aGH~~~~e~P---e~~~~~i~~~~ 285 (286)
T PRK03204 251 RATFPDHVLVELPNAKHFIQEDAP---DRIAAAIIERF 285 (286)
T ss_pred HHhcCCCeEEEcCCCcccccccCH---HHHHHHHHHhc
Confidence 444457899999999997665444 88888888886
No 42
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=6e-19 Score=128.73 Aligned_cols=188 Identities=21% Similarity=0.275 Sum_probs=133.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC----CCCchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR----YPSQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~----~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
++++|.||.....| ....+...+..+.++.++.+||+|.+... -....+|+.++++||++.. +
T Consensus 61 ~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~--------g 127 (258)
T KOG1552|consen 61 PTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRY--------G 127 (258)
T ss_pred eEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhc--------C
Confidence 78999999654333 24566777777789999999999865432 2356899999999999875 2
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEG 157 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (249)
+.++|+|+|+|+|...++.+|.+. ++.++|+.+|+++.....-+... ...+.+.+..
T Consensus 128 -~~~~Iil~G~SiGt~~tv~Lasr~--------~~~alVL~SPf~S~~rv~~~~~~------------~~~~~d~f~~-- 184 (258)
T KOG1552|consen 128 -SPERIILYGQSIGTVPTVDLASRY--------PLAAVVLHSPFTSGMRVAFPDTK------------TTYCFDAFPN-- 184 (258)
T ss_pred -CCceEEEEEecCCchhhhhHhhcC--------CcceEEEeccchhhhhhhccCcc------------eEEeeccccc--
Confidence 578999999999999999999873 28999999998865332211000 0000001100
Q ss_pred CCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHH
Q 041117 158 TDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFI 235 (249)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 235 (249)
...+.... .|+||+||++|.+++. +.+++++.+. +++-....|+||...... .+++
T Consensus 185 --------------i~kI~~i~-~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~~~----~~yi 242 (258)
T KOG1552|consen 185 --------------IEKISKIT-CPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIELY----PEYI 242 (258)
T ss_pred --------------cCcceecc-CCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcccccC----HHHH
Confidence 11222222 4699999999999974 5788888874 467888899999755433 7999
Q ss_pred HHHHHHHHhhhc
Q 041117 236 DDVGNFIRDQSA 247 (249)
Q Consensus 236 ~~~~~fl~~~~~ 247 (249)
+.+.+|+..-..
T Consensus 243 ~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 243 EHLRRFISSVLP 254 (258)
T ss_pred HHHHHHHHHhcc
Confidence 999999876544
No 43
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=3.8e-18 Score=138.04 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=67.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCc----hhhHHH-HHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQ----YDDGID-VLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~----~~d~~~-~~~~l~~~~~~~~~~~~ 76 (249)
|+||++||.|. + ...|...+..|++ +|.|+++|+|+.+....+.. .++..+ .++.+.+...
T Consensus 106 p~vvllHG~~~---~--~~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~------- 171 (402)
T PLN02894 106 PTLVMVHGYGA---S--QGFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK------- 171 (402)
T ss_pred CEEEEECCCCc---c--hhHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH-------
Confidence 89999999652 2 2236677788875 69999999999876543321 122221 1111111111
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..+.++++|+||||||.+|+.+|.++ +..++++|+++|..
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKH------PEHVQHLILVGPAG 211 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhC------chhhcEEEEECCcc
Confidence 12457899999999999999999984 44789999998764
No 44
>PLN02511 hydrolase
Probab=99.80 E-value=7e-19 Score=141.77 Aligned_cols=223 Identities=14% Similarity=0.059 Sum_probs=124.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-------CCchhhHHHHHHHHHhhccCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-------PSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
|+||++||.+ |+....++..++..+.++ ||+|+++|+|++++... ....+|+.++++++....
T Consensus 101 p~vvllHG~~---g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~------ 170 (388)
T PLN02511 101 PVLILLPGLT---GGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY------ 170 (388)
T ss_pred CEEEEECCCC---CCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC------
Confidence 7899999943 333332234566666664 99999999999865432 244788999999987754
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccccc--CCCCccchh--------
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLN--DITPLVSLR-------- 144 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~--~~~~~~~~~-------- 144 (249)
+..+++++|||+||.+++.++.+.++. ..+.+++++++..+............ .....+...
T Consensus 171 ----~~~~~~lvG~SlGg~i~~~yl~~~~~~----~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~ 242 (388)
T PLN02511 171 ----PSANLYAAGWSLGANILVNYLGEEGEN----CPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKH 242 (388)
T ss_pred ----CCCCEEEEEechhHHHHHHHHHhcCCC----CCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999999886532 23777777766554311000000000 000000000
Q ss_pred --------------------hHHHHHHhhCCCCCCCCCCCCC-CC--CCCccccccCCCCcEEEEecCCCcchhhHHHHH
Q 041117 145 --------------------RSDWMWTAFLPEGTDRDYPAAN-TF--GKHAVDISRVDIPATIVIVGGFDPLKDWQKRHY 201 (249)
Q Consensus 145 --------------------~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~ 201 (249)
....+.+.+.... ....... .+ ......+.+.. .|+|+++|++|++++.... .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~--~gf~~~~~yy~~~s~~~~L~~I~-vPtLiI~g~dDpi~p~~~~-~ 318 (388)
T PLN02511 243 ALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVS--FGFKSVDAYYSNSSSSDSIKHVR-VPLLCIQAANDPIAPARGI-P 318 (388)
T ss_pred HHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhc--CCCCCHHHHHHHcCchhhhccCC-CCeEEEEcCCCCcCCcccC-c
Confidence 0000000000000 0000000 00 00112333333 4699999999999874211 1
Q ss_pred HHHHHCCCceEEEEeCCCceeeeecCCCC--h-hHHHHHHHHHHHhhh
Q 041117 202 QGLKRHGKEAYLIEYPNAVHGFYIFPELH--E-GSFIDDVGNFIRDQS 246 (249)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~--~-~~~~~~~~~fl~~~~ 246 (249)
..+.+...++++++++++||.-+...+.. . ..+.+.+.+||+...
T Consensus 319 ~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 319 REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 22333455899999999999766544310 1 246788888887654
No 45
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.80 E-value=2.9e-18 Score=133.04 Aligned_cols=100 Identities=26% Similarity=0.286 Sum_probs=70.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC------CchhhHHHHHHHHHhhccCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP------SQYDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
|+||++||++ |+... |......+..+.||.|+++|+|+.+....+ ..+++..+.+..+.+..
T Consensus 26 ~~vl~~hG~~---g~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------- 93 (288)
T TIGR01250 26 IKLLLLHGGP---GMSHE--YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL------- 93 (288)
T ss_pred CeEEEEcCCC---CccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-------
Confidence 6899999964 23222 444445555545999999999987655433 23456666666555544
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+.++++++|||+||.+++.++... +.++++++++++..
T Consensus 94 ---~~~~~~liG~S~Gg~ia~~~a~~~------p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 94 ---GLDKFYLLGHSWGGMLAQEYALKY------GQHLKGLIISSMLD 131 (288)
T ss_pred ---CCCcEEEEEeehHHHHHHHHHHhC------ccccceeeEecccc
Confidence 456799999999999999999884 44788999887754
No 46
>PLN00021 chlorophyllase
Probab=99.80 E-value=7.2e-18 Score=131.21 Aligned_cols=205 Identities=19% Similarity=0.234 Sum_probs=128.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
+|+|||+||+++ + ...|..+++.|+++ ||.|+++|+++.........+++..+.++|+.+....+-......+.
T Consensus 52 ~PvVv~lHG~~~---~--~~~y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~ 125 (313)
T PLN00021 52 YPVLLFLHGYLL---Y--NSFYSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDL 125 (313)
T ss_pred CCEEEEECCCCC---C--cccHHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccCh
Confidence 599999999763 2 23378889999986 99999999876432233455677888889988653210000123567
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
++++|+|||+||.+|+.+|.+..... .+.+++++++++|+......... .+..
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~-~~~~v~ali~ldPv~g~~~~~~~-------~p~i------------------- 178 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVS-LPLKFSALIGLDPVDGTSKGKQT-------PPPV------------------- 178 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccc-cccceeeEEeeccccccccccCC-------CCcc-------------------
Confidence 89999999999999999998765432 12468999999887643211000 0000
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCCCc-----c----hhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC--
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGFDP-----L----KDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-- 229 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~-----~----~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-- 229 (249)
..+.+...++ . .|+||+.+..|. + .+......+-..+.+.+..+.+.++++|.-......
T Consensus 179 -----l~~~~~s~~~---~-~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 249 (313)
T PLN00021 179 -----LTYAPHSFNL---D-IPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDDTSG 249 (313)
T ss_pred -----cccCcccccC---C-CCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCCCcc
Confidence 0000000011 2 459999999763 2 233333334445555688899999999976544331
Q ss_pred ---------------C-h--hHHHHHHHHHHHhhhc
Q 041117 230 ---------------H-E--GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 230 ---------------~-~--~~~~~~~~~fl~~~~~ 247 (249)
. . +.+...+..||+.++.
T Consensus 250 ~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~ 285 (313)
T PLN00021 250 IRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLE 285 (313)
T ss_pred ccccccccccCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 1 1 4455567788877664
No 47
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.80 E-value=1.6e-18 Score=131.62 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=69.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
|+||++||.+ ++ ...|..+++.+ + +|.|+++|+|+.+....+.. .+..+..+++.+..+ ..+.+
T Consensus 3 p~vvllHG~~---~~--~~~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~-------~~~~~ 66 (242)
T PRK11126 3 PWLVFLHGLL---GS--GQDWQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQ-------SYNIL 66 (242)
T ss_pred CEEEEECCCC---CC--hHHHHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHH-------HcCCC
Confidence 8899999965 23 23488888876 3 79999999999876543322 233333333333322 02457
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+++++||||||.+|+.++.++++ ..+++++++++..
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~-----~~v~~lvl~~~~~ 102 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLA-----GGLCGLIVEGGNP 102 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCc-----ccccEEEEeCCCC
Confidence 99999999999999999998532 2488988887654
No 48
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.80 E-value=1.4e-18 Score=129.42 Aligned_cols=115 Identities=23% Similarity=0.346 Sum_probs=82.0
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLP 155 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (249)
.+++.++|+|.|+|.||.+|+.++.+. +..+.|++.+|+++........
T Consensus 100 ~~i~~~ri~l~GFSQGa~~al~~~l~~------p~~~~gvv~lsG~~~~~~~~~~------------------------- 148 (216)
T PF02230_consen 100 YGIDPSRIFLGGFSQGAAMALYLALRY------PEPLAGVVALSGYLPPESELED------------------------- 148 (216)
T ss_dssp TT--GGGEEEEEETHHHHHHHHHHHCT------SSTSSEEEEES---TTGCCCHC-------------------------
T ss_pred cCCChhheehhhhhhHHHHHHHHHHHc------CcCcCEEEEeeccccccccccc-------------------------
Confidence 347889999999999999999999984 4589999999987643211100
Q ss_pred CCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhH
Q 041117 156 EGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGS 233 (249)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 233 (249)
........|++++||++|+++|. ++...+.+++.+.+++++.|+++||... .+
T Consensus 149 ------------------~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~-------~~ 203 (216)
T PF02230_consen 149 ------------------RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS-------PE 203 (216)
T ss_dssp ------------------CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HH
T ss_pred ------------------cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC-------HH
Confidence 00000125699999999999974 5888999999999999999999999654 79
Q ss_pred HHHHHHHHHHhhh
Q 041117 234 FIDDVGNFIRDQS 246 (249)
Q Consensus 234 ~~~~~~~fl~~~~ 246 (249)
.++++.+||++++
T Consensus 204 ~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 204 ELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhhC
Confidence 9999999999864
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.80 E-value=2.2e-18 Score=132.86 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=121.3
Q ss_pred CEEEEEecCc-cccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-----CCchhhHHHHHHHHHhhccCCCCCC
Q 041117 2 PVIVYFHGGG-FVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-----PSQYDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 2 P~vv~~HGgg-~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
|.||++|||. +..|+. ..+..+++.|+++ ||.|+++|+++.+.... ....+|+.++++++.+...
T Consensus 27 ~~vv~i~gg~~~~~g~~--~~~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~------ 97 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSH--RQFVLLARRLAEA-GFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAP------ 97 (274)
T ss_pred CeEEEEeCCccccCCch--hHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC------
Confidence 4577777754 322332 2256678888885 99999999998765432 2234678888888876531
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLP 155 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (249)
+.++++++|||+||.+++.++.. +..++++|+++|++........... . ..+........+|..+..
T Consensus 98 ---g~~~i~l~G~S~Gg~~a~~~a~~-------~~~v~~lil~~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~ 164 (274)
T TIGR03100 98 ---HLRRIVAWGLCDAASAALLYAPA-------DLRVAGLVLLNPWVRTEAAQAASRI--R-HYYLGQLLSADFWRKLLS 164 (274)
T ss_pred ---CCCcEEEEEECHHHHHHHHHhhh-------CCCccEEEEECCccCCcccchHHHH--H-HHHHHHHhChHHHHHhcC
Confidence 34689999999999999998764 2379999999998653321111000 0 000000000011111111
Q ss_pred CCC------------------CCCCCCCCCC-CCCccccccCCCCcEEEEecCCCcchhhHHHH---HHHHHH-C-CCce
Q 041117 156 EGT------------------DRDYPAANTF-GKHAVDISRVDIPATIVIVGGFDPLKDWQKRH---YQGLKR-H-GKEA 211 (249)
Q Consensus 156 ~~~------------------~~~~~~~~~~-~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~---~~~l~~-~-~~~~ 211 (249)
... .......... ......+... ..|+++++|+.|...+..... ..+..+ . ..++
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 165 GEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCe
Confidence 000 0000000000 0001122222 347999999999876532110 022222 1 2578
Q ss_pred EEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHh
Q 041117 212 YLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 212 ~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~ 244 (249)
+++.+++++|.... .+. +++.+.+.+||++
T Consensus 244 ~~~~~~~~~H~l~~---e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 244 ERVEIDGADHTFSD---RVWREWVAARTTEWLRR 274 (274)
T ss_pred EEEecCCCCccccc---HHHHHHHHHHHHHHHhC
Confidence 99999999995322 222 8899999999963
No 50
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=4.9e-18 Score=145.74 Aligned_cols=212 Identities=19% Similarity=0.182 Sum_probs=148.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-----------CCchhhHHHHHHHHHhhcc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-----------PSQYDDGIDVLKFIDTKIS 69 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----------~~~~~d~~~~~~~l~~~~~ 69 (249)
||++|.+|||.. ..+.....-..+...++...|++|+.+|+|+++.... ...++|...+++++.+..-
T Consensus 526 yPllv~~yGGP~-sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~ 604 (755)
T KOG2100|consen 526 YPLLVVVYGGPG-SQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPF 604 (755)
T ss_pred CCEEEEecCCCC-cceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccc
Confidence 699999999873 1111222224556667777899999999999875432 2357888888888887764
Q ss_pred CCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHH
Q 041117 70 TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWM 149 (249)
Q Consensus 70 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (249)
+|.+++.|+|+|.||++++.++...+. ..++|.+.++|++++. ...+......
T Consensus 605 --------iD~~ri~i~GwSyGGy~t~~~l~~~~~-----~~fkcgvavaPVtd~~-~yds~~tery------------- 657 (755)
T KOG2100|consen 605 --------IDRSRVAIWGWSYGGYLTLKLLESDPG-----DVFKCGVAVAPVTDWL-YYDSTYTERY------------- 657 (755)
T ss_pred --------ccHHHeEEeccChHHHHHHHHhhhCcC-----ceEEEEEEecceeeee-eecccccHhh-------------
Confidence 899999999999999999999998532 3789999999999886 3222221110
Q ss_pred HHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcch--hhHHHHHHHHHHCCCceEEEEeCCCceeeeecC
Q 041117 150 WTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLK--DWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFP 227 (249)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 227 (249)
+-.+......+....+.. .+.....|-.|++||+.|.-+ +++.++.++|+.+|.+.++.+||+.+|++....
T Consensus 658 --mg~p~~~~~~y~e~~~~~----~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 658 --MGLPSENDKGYEESSVSS----PANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE 731 (755)
T ss_pred --cCCCccccchhhhccccc----hhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc
Confidence 000000010011111111 222224454799999999888 568999999999999999999999999877543
Q ss_pred CCChhHHHHHHHHHHHhhhcC
Q 041117 228 ELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 228 ~~~~~~~~~~~~~fl~~~~~~ 248 (249)
.. ..+...+..|+..++..
T Consensus 732 ~~--~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 732 VI--SHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ch--HHHHHHHHHHHHHHcCc
Confidence 32 68889999999987753
No 51
>PRK11071 esterase YqiA; Provisional
Probab=99.79 E-value=1.9e-17 Score=120.35 Aligned_cols=180 Identities=14% Similarity=0.102 Sum_probs=104.9
Q ss_pred CEEEEEecCccccCCCCccchh-H-HHHHHHHh-CCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYD-D-HCRRLAKE-IPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~-~-~~~~l~~~-~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
|+||++||.+ ++..+ |. . +...+.+. .++.|+++|.++.+ ++..+.+..+.+..
T Consensus 2 p~illlHGf~---ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~~---------- 58 (190)
T PRK11071 2 STLLYLHGFN---SSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLEH---------- 58 (190)
T ss_pred CeEEEECCCC---CCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHHc----------
Confidence 8899999944 33333 43 2 23444332 37999999998753 45666666666554
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccc-----cCCCCccchhhHHHHHHhh
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDL-----NDITPLVSLRRSDWMWTAF 153 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 153 (249)
+.++++++|+|+||.+++.+|.+.+ ..+++++|..+........... ......+.......... +
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~---------~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~ 128 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFM---------LPAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKV-M 128 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcC---------CCEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHh-c
Confidence 4578999999999999999999742 1357788866521110000000 00000111111111100 0
Q ss_pred CCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhH
Q 041117 154 LPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGS 233 (249)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 233 (249)
.. ..+. ...|++++||++|.++|. +.+.++.+ .++.++++|++|.|... ++
T Consensus 129 ------------~~-----~~i~--~~~~v~iihg~~De~V~~--~~a~~~~~---~~~~~~~~ggdH~f~~~-----~~ 179 (190)
T PRK11071 129 ------------QI-----DPLE--SPDLIWLLQQTGDEVLDY--RQAVAYYA---ACRQTVEEGGNHAFVGF-----ER 179 (190)
T ss_pred ------------CC-----ccCC--ChhhEEEEEeCCCCcCCH--HHHHHHHH---hcceEEECCCCcchhhH-----HH
Confidence 00 0111 113689999999999973 22223322 24577889999987433 78
Q ss_pred HHHHHHHHHH
Q 041117 234 FIDDVGNFIR 243 (249)
Q Consensus 234 ~~~~~~~fl~ 243 (249)
+++.+.+|+.
T Consensus 180 ~~~~i~~fl~ 189 (190)
T PRK11071 180 YFNQIVDFLG 189 (190)
T ss_pred hHHHHHHHhc
Confidence 9999999975
No 52
>PRK06489 hypothetical protein; Provisional
Probab=99.78 E-value=4.3e-18 Score=136.42 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=65.8
Q ss_pred CEEEEEecCccccCCCCccchh--HHHHHHH-------HhCCcEEEeecCCCCCCCCCC----------CchhhHHHHH-
Q 041117 2 PVIVYFHGGGFVLLAANSKRYD--DHCRRLA-------KEIPAVVISVNYRLAPENRYP----------SQYDDGIDVL- 61 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~--~~~~~l~-------~~~g~~v~~~d~r~~~~~~~~----------~~~~d~~~~~- 61 (249)
|+||++||++ ++... |. .+...+. .+ +|.|+++|+||++....+ ..+++..+.+
T Consensus 70 pplvllHG~~---~~~~~--~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~ 143 (360)
T PRK06489 70 NAVLVLHGTG---GSGKS--FLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQY 143 (360)
T ss_pred CeEEEeCCCC---Cchhh--hccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHH
Confidence 7899999965 23222 32 4444442 33 799999999998765432 2344544333
Q ss_pred HHHHhhccCCCCCCCccCCCceE-EEecchhHHHHHHHHHHhccccccccccccccccccC
Q 041117 62 KFIDTKISTVEDFPACADLKRCF-VAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPF 121 (249)
Q Consensus 62 ~~l~~~~~~~~~~~~~~~~~~i~-l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 121 (249)
..+.+.. +.++++ |+||||||.+|+.+|.++ |.+++++|++++.
T Consensus 144 ~~l~~~l----------gi~~~~~lvG~SmGG~vAl~~A~~~------P~~V~~LVLi~s~ 188 (360)
T PRK06489 144 RLVTEGL----------GVKHLRLILGTSMGGMHAWMWGEKY------PDFMDALMPMASQ 188 (360)
T ss_pred HHHHHhc----------CCCceeEEEEECHHHHHHHHHHHhC------chhhheeeeeccC
Confidence 3343433 456775 899999999999999985 4479999988764
No 53
>COG0400 Predicted esterase [General function prediction only]
Probab=99.78 E-value=1.6e-17 Score=120.50 Aligned_cols=173 Identities=15% Similarity=0.145 Sum_probs=118.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC-----------CCCCCC--CchhhHHHHHHHHHhhc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA-----------PENRYP--SQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-----------~~~~~~--~~~~d~~~~~~~l~~~~ 68 (249)
|+||++||-| |+..+ +.++.+.+.. ++.++.+.-+-. ....+. ....+.....+++....
T Consensus 19 ~~iilLHG~G---gde~~--~~~~~~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 19 PLLILLHGLG---GDELD--LVPLPELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred cEEEEEecCC---CChhh--hhhhhhhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 7899999955 34333 4555555554 466666542211 111222 11223333444444444
Q ss_pred cCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHH
Q 041117 69 STVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDW 148 (249)
Q Consensus 69 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (249)
. ..+++.++++++|+|-||++++.+..+. +..++++++++|.+-.....
T Consensus 92 ~-----~~gi~~~~ii~~GfSqGA~ial~~~l~~------~~~~~~ail~~g~~~~~~~~-------------------- 140 (207)
T COG0400 92 E-----EYGIDSSRIILIGFSQGANIALSLGLTL------PGLFAGAILFSGMLPLEPEL-------------------- 140 (207)
T ss_pred H-----HhCCChhheEEEecChHHHHHHHHHHhC------chhhccchhcCCcCCCCCcc--------------------
Confidence 3 4568889999999999999999999984 44799999999876432210
Q ss_pred HHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeec
Q 041117 149 MWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIF 226 (249)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 226 (249)
..++ ..+|+|++||+.|+++|. +.++.+.+++.|.+++.+.++ +||...
T Consensus 141 -----------------------~~~~---~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~-- 191 (207)
T COG0400 141 -----------------------LPDL---AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP-- 191 (207)
T ss_pred -----------------------cccc---CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC--
Confidence 0011 335699999999999864 588999999999999999999 799644
Q ss_pred CCCChhHHHHHHHHHHHhhh
Q 041117 227 PELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 227 ~~~~~~~~~~~~~~fl~~~~ 246 (249)
.+.++.+.+|+.+..
T Consensus 192 -----~e~~~~~~~wl~~~~ 206 (207)
T COG0400 192 -----PEELEAARSWLANTL 206 (207)
T ss_pred -----HHHHHHHHHHHHhcc
Confidence 788899999998764
No 54
>PLN02578 hydrolase
Probab=99.78 E-value=3.1e-17 Score=131.16 Aligned_cols=98 Identities=19% Similarity=0.071 Sum_probs=68.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCC---chhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPS---QYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
|.||++||.| ++ ...|...+..|++ +|.|+++|+++.+....+. ..++..+.+..+.+..
T Consensus 87 ~~vvliHG~~---~~--~~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---------- 149 (354)
T PLN02578 87 LPIVLIHGFG---AS--AFHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---------- 149 (354)
T ss_pred CeEEEECCCC---CC--HHHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh----------
Confidence 5789999954 22 3347778888875 6999999999977654332 2333222222222222
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..++++++|||+||.+++.+|.++ +..+++++++++..
T Consensus 150 ~~~~~~lvG~S~Gg~ia~~~A~~~------p~~v~~lvLv~~~~ 187 (354)
T PLN02578 150 VKEPAVLVGNSLGGFTALSTAVGY------PELVAGVALLNSAG 187 (354)
T ss_pred ccCCeEEEEECHHHHHHHHHHHhC------hHhcceEEEECCCc
Confidence 247899999999999999999985 44799999887643
No 55
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.78 E-value=1.2e-17 Score=133.59 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=74.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-------CchhhHHHHHHHHHhhccCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-------SQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
|+||++||.+ .+...|..++..|++ +|.|+++|+++.+....+ ..+++..+.+..+.+..
T Consensus 128 ~~ivllHG~~-----~~~~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l------ 194 (383)
T PLN03084 128 PPVLLIHGFP-----SQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL------ 194 (383)
T ss_pred CeEEEECCCC-----CCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh------
Confidence 7899999955 233348888888865 799999999987654432 34555566555555544
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
..++++|+|||+||.+++.++.++ +.+++++|+++|...
T Consensus 195 ----~~~~~~LvG~s~GG~ia~~~a~~~------P~~v~~lILi~~~~~ 233 (383)
T PLN03084 195 ----KSDKVSLVVQGYFSPPVVKYASAH------PDKIKKLILLNPPLT 233 (383)
T ss_pred ----CCCCceEEEECHHHHHHHHHHHhC------hHhhcEEEEECCCCc
Confidence 457899999999999999999984 447999999998753
No 56
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.78 E-value=1e-17 Score=133.89 Aligned_cols=107 Identities=33% Similarity=0.444 Sum_probs=92.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKR 82 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~ 82 (249)
.|+.+|||||+..+..+ ...+++.++...|+.++.+||.++|+.+||..++++.-++.|++.+.. ..+...+|
T Consensus 398 li~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~a-----llG~TgEr 470 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCA-----LLGSTGER 470 (880)
T ss_pred EEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHH-----HhCcccce
Confidence 68999999998776555 688999999999999999999999999999999999999999998875 56677899
Q ss_pred eEEEecchhHHHHHHHHHHhcccccccccccccccc
Q 041117 83 CFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPI 118 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 118 (249)
|+++|.|+||+++...+++..+.+. ..+.|+++.
T Consensus 471 iv~aGDSAGgNL~~~VaLr~i~~gv--RvPDGl~la 504 (880)
T KOG4388|consen 471 IVLAGDSAGGNLCFTVALRAIAYGV--RVPDGLMLA 504 (880)
T ss_pred EEEeccCCCcceeehhHHHHHHhCC--CCCCceEEe
Confidence 9999999999999999988765543 345566554
No 57
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.77 E-value=1.4e-17 Score=135.89 Aligned_cols=100 Identities=12% Similarity=0.183 Sum_probs=70.0
Q ss_pred CEEEEEecCccccCCCCccchhH-HHHHHHH--hCCcEEEeecCCCCCCCCCC----CchhhHHHHH-HHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDD-HCRRLAK--EIPAVVISVNYRLAPENRYP----SQYDDGIDVL-KFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~-~~~~l~~--~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~-~~l~~~~~~~~~ 73 (249)
|+||++||.+ ++. ..|.. ++..+++ +.+|.|+++|+++.+....+ ..+++..+.+ ..+.+..
T Consensus 202 ~~VVLlHG~~---~s~--~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l----- 271 (481)
T PLN03087 202 EDVLFIHGFI---SSS--AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY----- 271 (481)
T ss_pred CeEEEECCCC---ccH--HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-----
Confidence 6899999965 232 23553 3355542 24899999999997655432 2355555555 2444443
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+.++++++||||||.+++.+|.++ |.+++++++++|..
T Consensus 272 -----g~~k~~LVGhSmGG~iAl~~A~~~------Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 272 -----KVKSFHIVAHSLGCILALALAVKH------PGAVKSLTLLAPPY 309 (481)
T ss_pred -----CCCCEEEEEECHHHHHHHHHHHhC------hHhccEEEEECCCc
Confidence 567899999999999999999984 44799999998654
No 58
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.77 E-value=1.4e-16 Score=122.83 Aligned_cols=100 Identities=15% Similarity=0.136 Sum_probs=71.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC----CCchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY----PSQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|.||++||.+. +.. .|..+...|.++ ||.|+++|+++.+.... ...+++..+.+..+.+...
T Consensus 19 p~vvliHG~~~---~~~--~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~-------- 84 (273)
T PLN02211 19 PHFVLIHGISG---GSW--CWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP-------- 84 (273)
T ss_pred CeEEEECCCCC---CcC--cHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC--------
Confidence 78999999552 322 378888888775 99999999998765321 1344554444444433331
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..++++|+||||||.+++.++.++ +..++++|++++..
T Consensus 85 -~~~~v~lvGhS~GG~v~~~~a~~~------p~~v~~lv~~~~~~ 122 (273)
T PLN02211 85 -ENEKVILVGHSAGGLSVTQAIHRF------PKKICLAVYVAATM 122 (273)
T ss_pred -CCCCEEEEEECchHHHHHHHHHhC------hhheeEEEEecccc
Confidence 247899999999999999999874 34788999987754
No 59
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.77 E-value=3e-17 Score=129.79 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=109.7
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCCCCCC----C---Cc----hhhHHHHHHHHHhhcc--------CCCCC-CCccC-CC
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAPENRY----P---SQ----YDDGIDVLKFIDTKIS--------TVEDF-PACAD-LK 81 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~---~~----~~d~~~~~~~l~~~~~--------~~~~~-~~~~~-~~ 81 (249)
..+++.|+++ ||.|+++|+||.+.... . .. ++|+...++.+.+... ++... ..... ..
T Consensus 64 ~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 64 DSWIENFNKN-GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred HHHHHHHHHC-CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 4678899886 99999999998764331 1 12 3444444444432100 00000 00011 45
Q ss_pred ceEEEecchhHHHHHHHHHHhcccc--ccccccccccccccCCCCCCCCcc---c-cc----c----cCCCCccc--h--
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECK--FSKLKLIGVIPIQPFFGGEERTQS---E-ED----L----NDITPLVS--L-- 143 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~--~~~~~~~~~i~~~p~~~~~~~~~~---~-~~----~----~~~~~~~~--~-- 143 (249)
+++|+||||||.+++.++.+..+.. .....++|+|+++|.+........ . .. . ....+.+. .
T Consensus 143 p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 222 (332)
T TIGR01607 143 PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKI 222 (332)
T ss_pred ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCcc
Confidence 8999999999999999987654211 011268999999998743221000 0 00 0 00000000 0
Q ss_pred --hhHHHHHHhhCCCCCCCCCCCCC--C----C---CCCccccccCC-CCcEEEEecCCCcchhh--HHHHHHHHHHCCC
Q 041117 144 --RRSDWMWTAFLPEGTDRDYPAAN--T----F---GKHAVDISRVD-IPATIVIVGGFDPLKDW--QKRHYQGLKRHGK 209 (249)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~--~----~---~~~~~~~~~~~-~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~ 209 (249)
.......+.+........ .... . . ......+.... ..|+|+++|++|.+++. +..+.+++. ..
T Consensus 223 ~~~~~~~~~~~~~~Dp~~~~-~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~--~~ 299 (332)
T TIGR01607 223 RYEKSPYVNDIIKFDKFRYD-GGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS--IS 299 (332)
T ss_pred ccccChhhhhHHhcCccccC-CcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc--CC
Confidence 000000000000000000 0000 0 0 00000111111 24799999999999863 233333322 24
Q ss_pred ceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 210 EAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 210 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
+++++++++++|........ +++++.+.+||++
T Consensus 300 ~~~l~~~~g~~H~i~~E~~~--~~v~~~i~~wL~~ 332 (332)
T TIGR01607 300 NKELHTLEDMDHVITIEPGN--EEVLKKIIEWISN 332 (332)
T ss_pred CcEEEEECCCCCCCccCCCH--HHHHHHHHHHhhC
Confidence 68899999999987755322 7899999999863
No 60
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.76 E-value=3.4e-17 Score=132.06 Aligned_cols=211 Identities=18% Similarity=0.141 Sum_probs=118.0
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC---CCCchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR---YPSQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
|+||++||.+ ++. ..|..+...|.. +|.|+++|+++.+... ....++++.+.+..+.+..
T Consensus 132 ~~vl~~HG~~---~~~--~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~---------- 194 (371)
T PRK14875 132 TPVVLIHGFG---GDL--NNWLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL---------- 194 (371)
T ss_pred CeEEEECCCC---Ccc--chHHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----------
Confidence 6899999954 232 337777787765 6999999999876553 2234556666555555443
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc-ccCC--C--------------Ccc
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED-LNDI--T--------------PLV 141 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~~~--~--------------~~~ 141 (249)
+..+++|+|||+||.+++.+|.+. +.+++++++++|............. .... . ..+
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARA------PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALV 268 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhC------chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhC
Confidence 557899999999999999999873 3478899988876422211110000 0000 0 000
Q ss_pred chhhHHHHHHhhCCCCCCC-----CCCCCCC---CCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEE
Q 041117 142 SLRRSDWMWTAFLPEGTDR-----DYPAANT---FGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYL 213 (249)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~ 213 (249)
.......++.......... ....... .......+.+. ..|+++++|++|.+++.. ..+.+ ...+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~vp~~--~~~~l---~~~~~~ 342 (371)
T PRK14875 269 TRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL-AIPVLVIWGEQDRIIPAA--HAQGL---PDGVAV 342 (371)
T ss_pred CHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC-CCCEEEEEECCCCccCHH--HHhhc---cCCCeE
Confidence 0000000000000000000 0000000 00000112222 246999999999998732 22222 236889
Q ss_pred EEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 214 IEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 214 ~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
++++++||......+ +++.+.+.+||++
T Consensus 343 ~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 370 (371)
T PRK14875 343 HVLPGAGHMPQMEAA---ADVNRLLAEFLGK 370 (371)
T ss_pred EEeCCCCCChhhhCH---HHHHHHHHHHhcc
Confidence 999999996554433 7888888888865
No 61
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.76 E-value=8.4e-17 Score=121.71 Aligned_cols=99 Identities=19% Similarity=0.269 Sum_probs=76.5
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCC-----chhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPS-----QYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|+|+++||-. ..+.+|+.....|+.+ ||+|+++|.||.+....|. ++..+...+..+.+..
T Consensus 45 P~illlHGfP-----e~wyswr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-------- 110 (322)
T KOG4178|consen 45 PIVLLLHGFP-----ESWYSWRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-------- 110 (322)
T ss_pred CEEEEEccCC-----ccchhhhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh--------
Confidence 8999999943 3455688999999996 8999999999976554433 3555555566666654
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..++++++||++|+.+|..+|..+ |.++++++.++...
T Consensus 111 --g~~k~~lvgHDwGaivaw~la~~~------Perv~~lv~~nv~~ 148 (322)
T KOG4178|consen 111 --GLKKAFLVGHDWGAIVAWRLALFY------PERVDGLVTLNVPF 148 (322)
T ss_pred --ccceeEEEeccchhHHHHHHHHhC------hhhcceEEEecCCC
Confidence 468999999999999999999985 45788888876443
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=3.2e-17 Score=121.81 Aligned_cols=168 Identities=13% Similarity=0.091 Sum_probs=99.8
Q ss_pred CCEEEEEecCccccCCCCccchh--HHHHHHHHhCCcEEEeecCCCCCCCC-------------CCCchhhHHHHHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD--DHCRRLAKEIPAVVISVNYRLAPENR-------------YPSQYDDGIDVLKFID 65 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~--~~~~~l~~~~g~~v~~~d~r~~~~~~-------------~~~~~~d~~~~~~~l~ 65 (249)
+|+||++||++. +... +. .-...++++.|++|+++|+++..... ......++.+.++++.
T Consensus 13 ~P~vv~lHG~~~---~~~~--~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 13 RALVLALHGCGQ---TASA--YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCEEEEeCCCCC---CHHH--HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 599999999773 2221 21 11455666679999999998753211 1123456677777776
Q ss_pred hhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhh
Q 041117 66 TKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRR 145 (249)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (249)
+.. .++.++++|+|+|+||.+++.++.++ +..+.+++.+++.......... ... ........
T Consensus 88 ~~~--------~id~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~~~~~g~~~~~~~~~~-~~~---~~~~~~~~ 149 (212)
T TIGR01840 88 ANY--------SIDPNRVYVTGLSAGGGMTAVLGCTY------PDVFAGGASNAGLPYGEASSSI-SAT---PQMCTAAT 149 (212)
T ss_pred Hhc--------CcChhheEEEEECHHHHHHHHHHHhC------chhheEEEeecCCcccccccch-hhH---hhcCCCCC
Confidence 654 37888999999999999999999984 3468888887765422111000 000 00000001
Q ss_pred HHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHC
Q 041117 146 SDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRH 207 (249)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~ 207 (249)
...+.+..... . .......||++|+||++|.+++ .+..+.+++++.
T Consensus 150 ~~~~~~~~~~~-----------~-----~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 150 AASVCRLVRGM-----------Q-----SEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHHHhcc-----------C-----CcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 11111111000 0 0011245778999999999986 357788888765
No 63
>PRK07581 hypothetical protein; Validated
Probab=99.76 E-value=3.1e-17 Score=130.61 Aligned_cols=62 Identities=13% Similarity=-0.128 Sum_probs=46.7
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCC-CceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPN-AVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
.|+|+++|++|.+++.. ..+.+.+.-.+.+++++++ +||......+ +++.+.+.+||++.+.
T Consensus 276 ~PtLvI~G~~D~~~p~~--~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~---~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 276 AKTFVMPISTDLYFPPE--DCEAEAALIPNAELRPIESIWGHLAGFGQN---PADIAFIDAALKELLA 338 (339)
T ss_pred CCEEEEEeCCCCCCCHH--HHHHHHHhCCCCeEEEeCCCCCccccccCc---HHHHHHHHHHHHHHHh
Confidence 46999999999988632 2333333334689999998 8997665444 8999999999998775
No 64
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.76 E-value=1.7e-18 Score=129.53 Aligned_cols=196 Identities=18% Similarity=0.182 Sum_probs=112.9
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----CchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----SQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
||++||.+ ++. ..|..+++.|+ + ||.|+++|+|+.+....+ ..+++..+.+..+.+..
T Consensus 1 vv~~hG~~---~~~--~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---------- 63 (228)
T PF12697_consen 1 VVFLHGFG---GSS--ESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---------- 63 (228)
T ss_dssp EEEE-STT---TTG--GGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT----------
T ss_pred eEEECCCC---CCH--HHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc----------
Confidence 79999966 233 44888999885 4 999999999997765442 33455555555555554
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC-----ccccc-ccC-------------CCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT-----QSEED-LND-------------ITP 139 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~-----~~~~~-~~~-------------~~~ 139 (249)
+.++++++|||+||.+++.++.+. +..++++++++|........ ..... ... ...
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAARY------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR 137 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHHS------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccc------ccccccceeecccccccccccccccchhhhhhhhcccccccccccccccc
Confidence 347899999999999999999984 34899999999987532211 00000 000 000
Q ss_pred ccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCC
Q 041117 140 LVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNA 219 (249)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 219 (249)
.........+...... ..................+... ..|+++++|++|.+++ ....+.+.+...++++++++++
T Consensus 138 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PF12697_consen 138 WFDGDEPEDLIRSSRR-ALAEYLRSNLWQADLSEALPRI-KVPVLVIHGEDDPIVP--PESAEELADKLPNAELVVIPGA 213 (228)
T ss_dssp HHTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHGS-SSEEEEEEETTSSSSH--HHHHHHHHHHSTTEEEEEETTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccc-CCCeEEeecCCCCCCC--HHHHHHHHHHCCCCEEEEECCC
Confidence 0000000000000000 0000000000000000122222 2569999999999997 4555566554558999999999
Q ss_pred ceeeeec
Q 041117 220 VHGFYIF 226 (249)
Q Consensus 220 ~H~~~~~ 226 (249)
+|.....
T Consensus 214 gH~~~~~ 220 (228)
T PF12697_consen 214 GHFLFLE 220 (228)
T ss_dssp SSTHHHH
T ss_pred CCccHHH
Confidence 9976543
No 65
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=2.7e-16 Score=117.78 Aligned_cols=179 Identities=22% Similarity=0.197 Sum_probs=133.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC--CC-----------------CCCCCchhhHHHHHH
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA--PE-----------------NRYPSQYDDGIDVLK 62 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~-----------------~~~~~~~~d~~~~~~ 62 (249)
|+||.+|+ +.|-.. .++..+++|+.+ ||.|++||.-.. +. ........|+..+++
T Consensus 28 P~VIv~he---i~Gl~~--~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~ 101 (236)
T COG0412 28 PGVIVLHE---IFGLNP--HIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALD 101 (236)
T ss_pred CEEEEEec---ccCCch--HHHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 89999999 223322 378999999996 999999995321 10 011234678888889
Q ss_pred HHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccc
Q 041117 63 FIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVS 142 (249)
Q Consensus 63 ~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 142 (249)
||..... .+..+|.++|+|+||.+++.++.+. +.+++.+.++|........
T Consensus 102 ~L~~~~~--------~~~~~ig~~GfC~GG~~a~~~a~~~-------~~v~a~v~fyg~~~~~~~~-------------- 152 (236)
T COG0412 102 YLARQPQ--------VDPKRIGVVGFCMGGGLALLAATRA-------PEVKAAVAFYGGLIADDTA-------------- 152 (236)
T ss_pred HHHhCCC--------CCCceEEEEEEcccHHHHHHhhccc-------CCccEEEEecCCCCCCccc--------------
Confidence 9887763 5788999999999999999999863 2689999988755321110
Q ss_pred hhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCc
Q 041117 143 LRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAV 220 (249)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~ 220 (249)
. ......|+|+.+|+.|..++. ...+.+++.+++.++++.+|+++.
T Consensus 153 -------------------------------~-~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~ 200 (236)
T COG0412 153 -------------------------------D-APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAG 200 (236)
T ss_pred -------------------------------c-cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCc
Confidence 0 001335799999999998864 366778888888889999999999
Q ss_pred eeeeecC-----CCCh---hHHHHHHHHHHHhhhc
Q 041117 221 HGFYIFP-----ELHE---GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 221 H~~~~~~-----~~~~---~~~~~~~~~fl~~~~~ 247 (249)
|+|.... .++. +..++++.+|+++.+.
T Consensus 201 H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 201 HGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred cccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999652 3433 8899999999999875
No 66
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=7.4e-17 Score=126.26 Aligned_cols=219 Identities=16% Similarity=0.131 Sum_probs=124.5
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC-CCC----CCCchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP-ENR----YPSQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~----~~~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|.||++||.| + +...|+..+..+....|+.|+++|..|.+ ... ...++.+....+..+-...
T Consensus 59 ~pvlllHGF~----~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-------- 125 (326)
T KOG1454|consen 59 PPVLLLHGFG----A-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-------- 125 (326)
T ss_pred CcEEEecccc----C-CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh--------
Confidence 7899999944 2 33448899999988777999999998843 111 1223344444433332222
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhcccccccccccccc---ccccCCCCCCCCcccc-c-c-------cCCCCccchh
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVI---PIQPFFGGEERTQSEE-D-L-------NDITPLVSLR 144 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i---~~~p~~~~~~~~~~~~-~-~-------~~~~~~~~~~ 144 (249)
...+++++|||+||.+|+.+|+.++ ..+++++ ++.|............ . . ....+.....
T Consensus 126 --~~~~~~lvghS~Gg~va~~~Aa~~P------~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 197 (326)
T KOG1454|consen 126 --FVEPVSLVGHSLGGIVALKAAAYYP------ETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTE 197 (326)
T ss_pred --cCcceEEEEeCcHHHHHHHHHHhCc------ccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccccc
Confidence 3466999999999999999999954 4788888 5555443222110000 0 0 0000000000
Q ss_pred h----HHHHHHhhCC-----------------CC----CCCC--CCCCCCCC---CC-ccccccCCCCcEEEEecCCCcc
Q 041117 145 R----SDWMWTAFLP-----------------EG----TDRD--YPAANTFG---KH-AVDISRVDIPATIVIVGGFDPL 193 (249)
Q Consensus 145 ~----~~~~~~~~~~-----------------~~----~~~~--~~~~~~~~---~~-~~~~~~~~~pP~li~~g~~D~~ 193 (249)
. ...+...... .. ..++ ........ .. ...+.+....|+||++|++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~ 277 (326)
T KOG1454|consen 198 PVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQI 277 (326)
T ss_pred chhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCc
Confidence 0 0000000000 00 0000 00000000 11 1122222325799999999999
Q ss_pred hhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 194 KDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
+| .+.++.+++...++++++++++||.-....+ +.+++.+..|+....
T Consensus 278 ~p--~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~P---e~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 278 VP--LELAEELKKKLPNAELVEIPGAGHLPHLERP---EEVAALLRSFIARLR 325 (326)
T ss_pred cC--HHHHHHHHhhCCCceEEEeCCCCcccccCCH---HHHHHHHHHHHHHhc
Confidence 98 3356666665578999999999997655333 999999999998753
No 67
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.73 E-value=4.3e-16 Score=122.28 Aligned_cols=98 Identities=18% Similarity=0.180 Sum_probs=68.4
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----CchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----SQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|.||++||++ ++.. +......+.. .+|.|+++|+|+.+....+ ...+++.+.+..+.+..
T Consensus 28 ~~lvllHG~~---~~~~---~~~~~~~~~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------- 92 (306)
T TIGR01249 28 KPVVFLHGGP---GSGT---DPGCRRFFDP-ETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-------- 92 (306)
T ss_pred CEEEEECCCC---CCCC---CHHHHhccCc-cCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc--------
Confidence 5689999964 2222 1223333433 3899999999997655432 23456666666666554
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+.++++++|||+||.+++.++.+++ ..++++|++++..
T Consensus 93 --~~~~~~lvG~S~GG~ia~~~a~~~p------~~v~~lvl~~~~~ 130 (306)
T TIGR01249 93 --GIKNWLVFGGSWGSTLALAYAQTHP------EVVTGLVLRGIFL 130 (306)
T ss_pred --CCCCEEEEEECHHHHHHHHHHHHCh------Hhhhhheeecccc
Confidence 4578999999999999999999853 4688888887654
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.73 E-value=9.1e-17 Score=121.36 Aligned_cols=224 Identities=17% Similarity=0.144 Sum_probs=126.8
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-------CCCchhhHHHHHHHHHhhccCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-------YPSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
.|.||.+|| ..|+..+...+.+++.+.++ ||.|+++|.|+|.... .....+|+..++++++...
T Consensus 75 ~P~vVl~HG---L~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~----- 145 (345)
T COG0429 75 KPLVVLFHG---LEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARF----- 145 (345)
T ss_pred CceEEEEec---cCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhC-----
Confidence 389999999 55666666557777888876 9999999999986532 3345699999999998865
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhcccccccccccc-ccccccCCCCCCCCcccccccCCCCccchhhHHHHHHh
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIG-VIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTA 152 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~-~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (249)
.+.++..+|.|+||++-+.+..+..+ ..++.+ +++.+|+ |............. ..+++......+.+.
T Consensus 146 -----~~r~~~avG~SLGgnmLa~ylgeeg~----d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s-~~ly~r~l~~~L~~~ 214 (345)
T COG0429 146 -----PPRPLYAVGFSLGGNMLANYLGEEGD----DLPLDAAVAVSAPF-DLEACAYRLDSGFS-LRLYSRYLLRNLKRN 214 (345)
T ss_pred -----CCCceEEEEecccHHHHHHHHHhhcc----CcccceeeeeeCHH-HHHHHHHHhcCchh-hhhhHHHHHHHHHHH
Confidence 57899999999999554444443322 123344 4444443 22110000000000 011111111100000
Q ss_pred -------h---CCCC-----------CCCCCCCCCC----------C--CCCccccccCCCCcEEEEecCCCcchhhHHH
Q 041117 153 -------F---LPEG-----------TDRDYPAANT----------F--GKHAVDISRVDIPATIVIVGGFDPLKDWQKR 199 (249)
Q Consensus 153 -------~---~~~~-----------~~~~~~~~~~----------~--~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~ 199 (249)
+ .+.. ...++....+ + ......+.. ...|+||||+.+|+++++ +
T Consensus 215 ~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~-Ir~PtLii~A~DDP~~~~--~ 291 (345)
T COG0429 215 AARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPK-IRKPTLIINAKDDPFMPP--E 291 (345)
T ss_pred HHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccc-cccceEEEecCCCCCCCh--h
Confidence 0 0000 0000000000 0 011112332 234699999999999963 2
Q ss_pred HHHHHHH-CCCceEEEEeCCCceeeeecCCCCh--hHHHHHHHHHHHhhhc
Q 041117 200 HYQGLKR-HGKEAYLIEYPNAVHGFYIFPELHE--GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 200 ~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~--~~~~~~~~~fl~~~~~ 247 (249)
....... .+.++.+.+.+.+||.-++...+.+ ....+++.+|++..++
T Consensus 292 ~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 292 VIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred hCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 2222222 5678999999999998666544333 3778889999987654
No 69
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.73 E-value=4.7e-17 Score=129.65 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=59.6
Q ss_pred chhHHHH---HHHHhCCcEEEeecCCCCCCCCC-CCchhhHHHHHHHHHhhccCCCCCCCccCCCc-eEEEecchhHHHH
Q 041117 21 RYDDHCR---RLAKEIPAVVISVNYRLAPENRY-PSQYDDGIDVLKFIDTKISTVEDFPACADLKR-CFVAGDSAGGNLA 95 (249)
Q Consensus 21 ~~~~~~~---~l~~~~g~~v~~~d~r~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~-i~l~G~S~GG~~a 95 (249)
+|..++. .|..+ +|.|+++|+||.+.... +...++..+.+..+.+.. +.++ ++|+||||||.+|
T Consensus 84 ~w~~~v~~~~~L~~~-~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----------~l~~~~~lvG~SmGG~vA 152 (343)
T PRK08775 84 WWEGLVGSGRALDPA-RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----------GIARLHAFVGYSYGALVG 152 (343)
T ss_pred cchhccCCCCccCcc-ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----------CCCcceEEEEECHHHHHH
Confidence 3666664 45443 79999999998754321 123455555555555544 3445 5799999999999
Q ss_pred HHHHHHhccccccccccccccccccCCC
Q 041117 96 HNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 96 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
+.+|.+++ .+++++|++++...
T Consensus 153 ~~~A~~~P------~~V~~LvLi~s~~~ 174 (343)
T PRK08775 153 LQFASRHP------ARVRTLVVVSGAHR 174 (343)
T ss_pred HHHHHHCh------HhhheEEEECcccc
Confidence 99999854 47999999987643
No 70
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.71 E-value=1e-16 Score=121.75 Aligned_cols=108 Identities=22% Similarity=0.203 Sum_probs=71.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
+.+|++||-| .....|-.-...|+. ...|.++|..+.+..+.|.--.|...+-.+..+..++ -....+.+
T Consensus 91 ~plVliHGyG-----Ag~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~---WR~~~~L~ 160 (365)
T KOG4409|consen 91 TPLVLIHGYG-----AGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQ---WRKKMGLE 160 (365)
T ss_pred CcEEEEeccc-----hhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHH---HHHHcCCc
Confidence 5789999944 122225666778887 7899999999876655443322222222222222210 01113567
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCC
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
+.+|+|||+||++|..+|++++ .+|+.+|+++|+--..
T Consensus 161 KmilvGHSfGGYLaa~YAlKyP------erV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 161 KMILVGHSFGGYLAAKYALKYP------ERVEKLILVSPWGFPE 198 (365)
T ss_pred ceeEeeccchHHHHHHHHHhCh------HhhceEEEeccccccc
Confidence 9999999999999999999955 4899999999986443
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.70 E-value=9.3e-16 Score=116.41 Aligned_cols=219 Identities=13% Similarity=0.040 Sum_probs=120.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-------CCchhhHHHHHHHHHhhccCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-------PSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
.|+||++||.|.... .....|..+++.|+++ ||.|+++|||+++.... ....+|+..+++++.+.
T Consensus 25 ~~~VlllHG~g~~~~-~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~------ 96 (266)
T TIGR03101 25 RGVVIYLPPFAEEMN-KSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ------ 96 (266)
T ss_pred ceEEEEECCCccccc-chhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc------
Confidence 368999999542111 1122356678888875 99999999999765421 12346777777777653
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccch---hhHHHHH
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSL---RRSDWMW 150 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 150 (249)
+.++++|+||||||.+++.++.+. +..++++|+++|++..........+..-....+.. .......
T Consensus 97 -----~~~~v~LvG~SmGG~vAl~~A~~~------p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~~~~~ 165 (266)
T TIGR03101 97 -----GHPPVTLWGLRLGALLALDAANPL------AAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEASNSLR 165 (266)
T ss_pred -----CCCCEEEEEECHHHHHHHHHHHhC------ccccceEEEeccccchHHHHHHHHHHHHHHHhccccccccchhHH
Confidence 347899999999999999999874 34789999999987654322221110000000000 0000000
Q ss_pred HhhCCCCC-CCCCCCCCCC---CCCccccccC--CCCcEEEEecCC--Cc-chhhHHHHHHHHHHCCCceEEEEeCCCce
Q 041117 151 TAFLPEGT-DRDYPAANTF---GKHAVDISRV--DIPATIVIVGGF--DP-LKDWQKRHYQGLKRHGKEAYLIEYPNAVH 221 (249)
Q Consensus 151 ~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~--~~pP~li~~g~~--D~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 221 (249)
......+. ........+. .-..-++... ...+++++.-+. |. ..+...++++++++.|.+++...+++.
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~~-- 243 (266)
T TIGR03101 166 ERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPGP-- 243 (266)
T ss_pred hhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCCc--
Confidence 00000000 0000000000 0000011100 123577766543 32 334568899999999999999999986
Q ss_pred eeeecCCCCh-hHHHHHHHH
Q 041117 222 GFYIFPELHE-GSFIDDVGN 240 (249)
Q Consensus 222 ~~~~~~~~~~-~~~~~~~~~ 240 (249)
.|...+...+ ...++....
T Consensus 244 ~~~~~~~~~~~p~~~~~~~~ 263 (266)
T TIGR03101 244 AFWQTQEIEEAPELIARTTA 263 (266)
T ss_pred hhhcchhhhHhHHHHHHHHh
Confidence 5554444444 444444443
No 72
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.70 E-value=2.6e-15 Score=119.98 Aligned_cols=105 Identities=12% Similarity=0.080 Sum_probs=74.3
Q ss_pred CEEEEEecC---ccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchh-----hHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGG---GFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYD-----DGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGg---g~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~-----d~~~~~~~l~~~~~~~~~ 73 (249)
++||++||- +++. +...++.+++.|+++ ||.|+++|+++.+.......++ ++.++++++.+..
T Consensus 63 ~pvl~v~~~~~~~~~~---d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~----- 133 (350)
T TIGR01836 63 TPLLIVYALVNRPYML---DLQEDRSLVRGLLER-GQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTS----- 133 (350)
T ss_pred CcEEEeccccccceec---cCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHh-----
Confidence 358899982 2211 111246789999885 9999999999765432222333 3556677777654
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
+.++++++|||+||.+++.++... +..++++++++|.++...
T Consensus 134 -----~~~~i~lvGhS~GG~i~~~~~~~~------~~~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 134 -----KLDQISLLGICQGGTFSLCYAALY------PDKIKNLVTMVTPVDFET 175 (350)
T ss_pred -----CCCcccEEEECHHHHHHHHHHHhC------chheeeEEEeccccccCC
Confidence 457999999999999999998874 346899999998887543
No 73
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.70 E-value=2.6e-16 Score=145.69 Aligned_cols=220 Identities=15% Similarity=0.160 Sum_probs=126.0
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----------CchhhHHHHHHHHHhhccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----------SQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----------~~~~d~~~~~~~l~~~~~~ 70 (249)
|+||++||.+ ++.. .|..++..|.. +|.|+++|+|+.+....+ ..++++.+.+..+.+..
T Consensus 1372 ~~vVllHG~~---~s~~--~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-- 1442 (1655)
T PLN02980 1372 SVVLFLHGFL---GTGE--DWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-- 1442 (1655)
T ss_pred CeEEEECCCC---CCHH--HHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh--
Confidence 6899999955 3333 37888888865 699999999997654322 23555566555554443
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC---CCCccchhhHH
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND---ITPLVSLRRSD 147 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 147 (249)
+.++++|+||||||.+++.++.++ +.++++++++++................ ....+......
T Consensus 1443 --------~~~~v~LvGhSmGG~iAl~~A~~~------P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1443 --------TPGKVTLVGYSMGARIALYMALRF------SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred --------CCCCEEEEEECHHHHHHHHHHHhC------hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 457999999999999999999984 4478999988764322211000000000 00000000000
Q ss_pred HHHHhhCCCC----C---------------CCCC-C---CCCCC-----CCCccccccCCCCcEEEEecCCCcchhh-HH
Q 041117 148 WMWTAFLPEG----T---------------DRDY-P---AANTF-----GKHAVDISRVDIPATIVIVGGFDPLKDW-QK 198 (249)
Q Consensus 148 ~~~~~~~~~~----~---------------~~~~-~---~~~~~-----~~~~~~~~~~~~pP~li~~g~~D~~~~~-~~ 198 (249)
.+...+.... . .... . ..... ......+.... .|+|+++|++|.+++. +.
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~-~PtLlI~Ge~D~~~~~~a~ 1587 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCD-TPLLLVVGEKDVKFKQIAQ 1587 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCC-CCEEEEEECCCCccHHHHH
Confidence 0000000000 0 0000 0 00000 00111233233 4699999999997753 34
Q ss_pred HHHHHHHHCC--------CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhcC
Q 041117 199 RHYQGLKRHG--------KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 199 ~~~~~l~~~~--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
++.+.+.... ..+++++++++||......+ +++.+.+.+||++.-++
T Consensus 1588 ~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~P---e~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1588 KMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENP---LPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHHccccccccccccccceEEEEECCCCCchHHHCH---HHHHHHHHHHHHhcccc
Confidence 5555554321 13689999999997665544 89999999999986543
No 74
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.68 E-value=9.8e-17 Score=128.22 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=69.5
Q ss_pred CEEEEEecCccccCCCCcc---------chhHHH---HHHHHhCCcEEEeecCCCC--CCCC---------------CCC
Q 041117 2 PVIVYFHGGGFVLLAANSK---------RYDDHC---RRLAKEIPAVVISVNYRLA--PENR---------------YPS 52 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~---------~~~~~~---~~l~~~~g~~v~~~d~r~~--~~~~---------------~~~ 52 (249)
|+||++||-+ ++.... +|..++ ..+..+ +|.|+++|+||. +... .+.
T Consensus 32 ~~vll~Hg~~---~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~ 107 (351)
T TIGR01392 32 NAVLVCHALT---GDAHVAGYHDDGDPGWWDDLIGPGRAIDTD-RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI 107 (351)
T ss_pred CEEEEcCCcC---cchhhcccCCCCCCCchhhccCCCCCcCCC-ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Confidence 6899999943 232211 244443 244443 899999999982 1111 123
Q ss_pred chhhHHHHHHHHHhhccCCCCCCCccCCCc-eEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 53 QYDDGIDVLKFIDTKISTVEDFPACADLKR-CFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 53 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~-i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
.++|..+.+..+.+.. +.++ ++|+||||||.+++.++.+++ .+++++|++++...
T Consensus 108 ~~~~~~~~~~~~~~~l----------~~~~~~~l~G~S~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 108 TIRDDVKAQKLLLDHL----------GIEQIAAVVGGSMGGMQALEWAIDYP------ERVRAIVVLATSAR 163 (351)
T ss_pred cHHHHHHHHHHHHHHc----------CCCCceEEEEECHHHHHHHHHHHHCh------HhhheEEEEccCCc
Confidence 4677777776666554 4567 999999999999999999854 47899999887653
No 75
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.68 E-value=8.2e-16 Score=123.94 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=50.7
Q ss_pred CcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeC-CCceeeeecCCCChhHHHHHHHHHHHhhhcC
Q 041117 181 PATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYP-NAVHGFYIFPELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 181 pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
.|+|+++|++|.+++. ...+++.+...+..+++.+++ ++||...+..+ +++.+.+.+||++...+
T Consensus 310 ~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p---~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 310 ARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDD---PRYGRLVRAFLERAARE 377 (379)
T ss_pred CCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCH---HHHHHHHHHHHHhhhhc
Confidence 4799999999998853 466778887666667888775 99997555443 88999999999987554
No 76
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.68 E-value=4.9e-16 Score=110.07 Aligned_cols=199 Identities=18% Similarity=0.233 Sum_probs=131.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC---C-CCchhhHHHHHHHHHhhccCCCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR---Y-PSQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---~-~~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
.|+++++||.+ |. ..-.-..+.-+-.+.++.|+.++|||.+... - ....-|...+++++.....
T Consensus 78 ~pTlLyfh~NA---GN--mGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~------- 145 (300)
T KOG4391|consen 78 RPTLLYFHANA---GN--MGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPD------- 145 (300)
T ss_pred CceEEEEccCC---Cc--ccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCcc-------
Confidence 48999999944 22 2113455666667789999999999865432 2 2345799999999988775
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHH-hhCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWT-AFLP 155 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 155 (249)
.+..+++++|.|.||.+|..+|.+.. .++.++|+-+.++.......... .++.-.......++ .+.
T Consensus 146 -~dktkivlfGrSlGGAvai~lask~~------~ri~~~ivENTF~SIp~~~i~~v-----~p~~~k~i~~lc~kn~~~- 212 (300)
T KOG4391|consen 146 -LDKTKIVLFGRSLGGAVAIHLASKNS------DRISAIIVENTFLSIPHMAIPLV-----FPFPMKYIPLLCYKNKWL- 212 (300)
T ss_pred -CCcceEEEEecccCCeeEEEeeccch------hheeeeeeechhccchhhhhhee-----ccchhhHHHHHHHHhhhc-
Confidence 68889999999999999999999843 37899998877776522211110 11111111122222 111
Q ss_pred CCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhH
Q 041117 156 EGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGS 233 (249)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 233 (249)
+.. .+.... .|.|++.|..|.++|+. +.+.+.... ...++.+||++.|+-.... +-
T Consensus 213 -----S~~----------ki~~~~-~P~LFiSGlkDelVPP~~Mr~Ly~~c~S--~~Krl~eFP~gtHNDT~i~----dG 270 (300)
T KOG4391|consen 213 -----SYR----------KIGQCR-MPFLFISGLKDELVPPVMMRQLYELCPS--RTKRLAEFPDGTHNDTWIC----DG 270 (300)
T ss_pred -----chh----------hhcccc-CceEEeecCccccCCcHHHHHHHHhCch--hhhhheeCCCCccCceEEe----cc
Confidence 111 111113 45999999999999743 444444443 3568999999999644333 78
Q ss_pred HHHHHHHHHHhhh
Q 041117 234 FIDDVGNFIRDQS 246 (249)
Q Consensus 234 ~~~~~~~fl~~~~ 246 (249)
+++.+.+||.+..
T Consensus 271 Yfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 271 YFQAIEDFLAEVV 283 (300)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998754
No 77
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=4.2e-15 Score=116.34 Aligned_cols=223 Identities=13% Similarity=0.133 Sum_probs=132.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-------CchhhHHHHHHHHHhhccCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-------SQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
.|+||++|| ..|++.....+.++....+ .||.|+++|.||+++.... ...+|+..+++++.+..
T Consensus 125 ~P~vvilpG---ltg~S~~~YVr~lv~~a~~-~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~----- 195 (409)
T KOG1838|consen 125 DPIVVILPG---LTGGSHESYVRHLVHEAQR-KGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRY----- 195 (409)
T ss_pred CcEEEEecC---CCCCChhHHHHHHHHHHHh-CCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhC-----
Confidence 499999999 3344444434556655555 5999999999997665432 34799999999999886
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC--CCC--Ccccccc--------------c
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG--EER--TQSEEDL--------------N 135 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~--~~~--~~~~~~~--------------~ 135 (249)
+..+++.+|.||||++...+..+..+. .+...|+.+.+||--. ... ....... .
T Consensus 196 -----P~a~l~avG~S~Gg~iL~nYLGE~g~~---~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~ 267 (409)
T KOG1838|consen 196 -----PQAPLFAVGFSMGGNILTNYLGEEGDN---TPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLR 267 (409)
T ss_pred -----CCCceEEEEecchHHHHHHHhhhccCC---CCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhh
Confidence 557899999999999999999876543 2356777777776421 000 0000000 0
Q ss_pred C----------CCCccchhhHHHHHHhhCC----CCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHH
Q 041117 136 D----------ITPLVSLRRSDWMWTAFLP----EGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHY 201 (249)
Q Consensus 136 ~----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~ 201 (249)
. .+........+++-+.+.. -....+++.. ......+.+++. |+|++++.+|+++|....=.
T Consensus 268 ~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~---aSs~~~v~~I~V-P~L~ina~DDPv~p~~~ip~ 343 (409)
T KOG1838|consen 268 HRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKK---ASSSNYVDKIKV-PLLCINAADDPVVPEEAIPI 343 (409)
T ss_pred hhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh---cchhhhcccccc-cEEEEecCCCCCCCcccCCH
Confidence 0 0000000111111111100 0000000000 111223333344 59999999999997532222
Q ss_pred HHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHH-HHHHHHhh
Q 041117 202 QGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDD-VGNFIRDQ 245 (249)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~-~~~fl~~~ 245 (249)
+.+++ ++++-+.+-..+||.-++..-++. ..+.+. +.+|+...
T Consensus 344 ~~~~~-np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 344 DDIKS-NPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred HHHhc-CCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 33333 458899999999998776665455 777777 88888764
No 78
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.67 E-value=4.7e-15 Score=103.27 Aligned_cols=176 Identities=20% Similarity=0.265 Sum_probs=116.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC--CCCC---CchhhHHHHHHHHHhhccCCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE--NRYP---SQYDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~~~~---~~~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
.|+.|.+|-=.-.-|+.+..-....++.|.+ .|+.++.+|||+-+. ..+. ...+|+..+++|++++..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~-~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp------ 100 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVK-RGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHP------ 100 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHh-CCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCC------
Confidence 3778888873333344444434455566665 599999999998543 3333 347999999999998864
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLP 155 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (249)
+.....+.|+|.|+++++++|.+.+ .....+..+|.+.....
T Consensus 101 ---~s~~~~l~GfSFGa~Ia~~la~r~~-------e~~~~is~~p~~~~~df---------------------------- 142 (210)
T COG2945 101 ---DSASCWLAGFSFGAYIAMQLAMRRP-------EILVFISILPPINAYDF---------------------------- 142 (210)
T ss_pred ---CchhhhhcccchHHHHHHHHHHhcc-------cccceeeccCCCCchhh----------------------------
Confidence 3344589999999999999999753 34556665554431000
Q ss_pred CCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHH
Q 041117 156 EGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFI 235 (249)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 235 (249)
. .+.... .|.++++|+.|.+++... ..+..+ +.+.+++.+++++|.|...- ..+.
T Consensus 143 -------s----------~l~P~P-~~~lvi~g~~Ddvv~l~~-~l~~~~--~~~~~~i~i~~a~HFF~gKl----~~l~ 197 (210)
T COG2945 143 -------S----------FLAPCP-SPGLVIQGDADDVVDLVA-VLKWQE--SIKITVITIPGADHFFHGKL----IELR 197 (210)
T ss_pred -------h----------hccCCC-CCceeEecChhhhhcHHH-HHHhhc--CCCCceEEecCCCceecccH----HHHH
Confidence 0 111001 269999999998775222 222233 36789999999999766433 6888
Q ss_pred HHHHHHHH-hhh
Q 041117 236 DDVGNFIR-DQS 246 (249)
Q Consensus 236 ~~~~~fl~-~~~ 246 (249)
+.+.+|+. .++
T Consensus 198 ~~i~~~l~~r~l 209 (210)
T COG2945 198 DTIADFLEDRRL 209 (210)
T ss_pred HHHHHHhhcccc
Confidence 88888884 443
No 79
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.65 E-value=2.8e-14 Score=106.18 Aligned_cols=116 Identities=18% Similarity=0.319 Sum_probs=85.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
|||+||+||-+ ... ..|..+++++|+. ||+|+.+|+.......-....+++.+.++|+.+.+...-......|-
T Consensus 17 yPVv~f~~G~~----~~~-s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~ 90 (259)
T PF12740_consen 17 YPVVLFLHGFL----LIN-SWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDF 90 (259)
T ss_pred cCEEEEeCCcC----CCH-HHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccc
Confidence 79999999944 122 2389999999995 99999999554333445566888899999988755311011123577
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
+++.|.|||.||-+|..++....+.. ...++++++++.|+-.
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~-~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSS-LDLRFSALILLDPVDG 132 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccc-cccceeEEEEeccccc
Confidence 89999999999999999998753211 1347999999998763
No 80
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.64 E-value=4.9e-15 Score=104.89 Aligned_cols=207 Identities=14% Similarity=0.137 Sum_probs=120.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-------CCCchhhHHHHHHHHHhhccCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-------YPSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
.++|++||. ....+.......+.++++ .|+.++.+|+++.++.. +....+|+...++++...
T Consensus 34 e~vvlcHGf---rS~Kn~~~~~~vA~~~e~-~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~------- 102 (269)
T KOG4667|consen 34 EIVVLCHGF---RSHKNAIIMKNVAKALEK-EGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS------- 102 (269)
T ss_pred eEEEEeecc---ccccchHHHHHHHHHHHh-cCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-------
Confidence 478999992 122222222344555655 59999999999865532 334457777777777542
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHh-h
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTA-F 153 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (249)
+..--+|+|||-||.+++.++.++.+ ++-+|-+++-++........ +......+..++ +
T Consensus 103 ----nr~v~vi~gHSkGg~Vvl~ya~K~~d-------~~~viNcsGRydl~~~I~eR---------lg~~~l~~ike~Gf 162 (269)
T KOG4667|consen 103 ----NRVVPVILGHSKGGDVVLLYASKYHD-------IRNVINCSGRYDLKNGINER---------LGEDYLERIKEQGF 162 (269)
T ss_pred ----ceEEEEEEeecCccHHHHHHHHhhcC-------chheEEcccccchhcchhhh---------hcccHHHHHHhCCc
Confidence 22335899999999999999998753 56677777766554332100 011111111111 1
Q ss_pred CCCCCCCCC--CCCCCC--------CCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCce
Q 041117 154 LPEGTDRDY--PAANTF--------GKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVH 221 (249)
Q Consensus 154 ~~~~~~~~~--~~~~~~--------~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H 221 (249)
......... ....+. ......++-.+.+|+|-+||.+|.++| .+.++++.++ +.++++++|++|
T Consensus 163 id~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~----nH~L~iIEgADH 238 (269)
T KOG4667|consen 163 IDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP----NHKLEIIEGADH 238 (269)
T ss_pred eecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc----CCceEEecCCCc
Confidence 100000000 000000 000111221244689999999999997 4567777776 578999999999
Q ss_pred eeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 222 GFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
+|.... .+.......|.+-+..
T Consensus 239 nyt~~q----~~l~~lgl~f~k~r~n 260 (269)
T KOG4667|consen 239 NYTGHQ----SQLVSLGLEFIKTRIN 260 (269)
T ss_pred Cccchh----hhHhhhcceeEEeeec
Confidence 987544 5666666666655443
No 81
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=1.5e-14 Score=117.35 Aligned_cols=208 Identities=19% Similarity=0.184 Sum_probs=136.9
Q ss_pred CCEEEEEecCccccCCCCccchh--HHHHHHHHhCCcEEEeecCCCCCCCC--C---------CCchhhHHHHHHHHHhh
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD--DHCRRLAKEIPAVVISVNYRLAPENR--Y---------PSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~--~~~~~l~~~~g~~v~~~d~r~~~~~~--~---------~~~~~d~~~~~~~l~~~ 67 (249)
||+|+++.||.-+.-..++..+- --...|++. ||.|+.+|.||+-... | .-.++|-.+.+++|.++
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 79999999988655443332221 124567774 9999999999975432 1 22368899999999988
Q ss_pred ccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHH
Q 041117 68 ISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSD 147 (249)
Q Consensus 68 ~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (249)
.. -+|.++|.|-|+|.||+++++...++ |..+++.|.-+|+.++..-..-+ ..
T Consensus 721 ~g-------fidmdrV~vhGWSYGGYLSlm~L~~~------P~IfrvAIAGapVT~W~~YDTgY--------------TE 773 (867)
T KOG2281|consen 721 TG-------FIDMDRVGVHGWSYGGYLSLMGLAQY------PNIFRVAIAGAPVTDWRLYDTGY--------------TE 773 (867)
T ss_pred cC-------cccchheeEeccccccHHHHHHhhcC------cceeeEEeccCcceeeeeecccc--------------hh
Confidence 64 27899999999999999999999984 45889999988988664321100 00
Q ss_pred HHHHhhCCCC-CCCCCCCCCCCCCCccccccCCCC-cEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCceee
Q 041117 148 WMWTAFLPEG-TDRDYPAANTFGKHAVDISRVDIP-ATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVHGF 223 (249)
Q Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p-P~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 223 (249)
.|.+-. .................+. .-| .+|++||--|.-|- +...+..++.++|++.++++||+.-|..
T Consensus 774 ----RYMg~P~~nE~gY~agSV~~~Veklp--depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsi 847 (867)
T KOG2281|consen 774 ----RYMGYPDNNEHGYGAGSVAGHVEKLP--DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSI 847 (867)
T ss_pred ----hhcCCCccchhcccchhHHHHHhhCC--CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcccccccc
Confidence 111000 0000111110000111111 112 38999999998773 5678889999999999999999999964
Q ss_pred eecCCCChhHHHHHHHHHHHh
Q 041117 224 YIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 224 ~~~~~~~~~~~~~~~~~fl~~ 244 (249)
-....- .-+-.+++.|+.+
T Consensus 848 R~~es~--~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 848 RNPESG--IYYEARLLHFLQE 866 (867)
T ss_pred CCCccc--hhHHHHHHHHHhh
Confidence 322111 5666778888875
No 82
>PLN02872 triacylglycerol lipase
Probab=99.62 E-value=1.7e-14 Score=115.79 Aligned_cols=104 Identities=14% Similarity=0.063 Sum_probs=66.7
Q ss_pred CEEEEEecCccccCCCCcc----chhHHHHHHHHhCCcEEEeecCCCCCCC---C-------------CCCc-hhhHHHH
Q 041117 2 PVIVYFHGGGFVLLAANSK----RYDDHCRRLAKEIPAVVISVNYRLAPEN---R-------------YPSQ-YDDGIDV 60 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~----~~~~~~~~l~~~~g~~v~~~d~r~~~~~---~-------------~~~~-~~d~~~~ 60 (249)
|+|+++||.+. ++... ....++..|+++ ||.|+++|.|++... . +... ..|+.++
T Consensus 75 ~~Vll~HGl~~---ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 75 PPVLLQHGLFM---AGDAWFLNSPEQSLGFILADH-GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEM 150 (395)
T ss_pred CeEEEeCcccc---cccceeecCcccchHHHHHhC-CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHH
Confidence 78999999542 22221 012345567764 999999999985321 0 0011 2577777
Q ss_pred HHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 61 LKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 61 ~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
++++.+. ..++++++|||+||.+++.++. .++ ....++.+++++|....
T Consensus 151 id~i~~~-----------~~~~v~~VGhS~Gg~~~~~~~~-~p~---~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 151 IHYVYSI-----------TNSKIFIVGHSQGTIMSLAALT-QPN---VVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHhc-----------cCCceEEEEECHHHHHHHHHhh-ChH---HHHHHHHHHHhcchhhh
Confidence 7777643 2368999999999999985553 222 11357888888887543
No 83
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.61 E-value=1.5e-15 Score=120.68 Aligned_cols=112 Identities=29% Similarity=0.393 Sum_probs=89.4
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-------------CCCCchhhHHHHHHHHHhh
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-------------RYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------------~~~~~~~d~~~~~~~l~~~ 67 (249)
+|||||||||+|..|+.+...|. ...|+++.+++|+++|||+..-. .-.-.+.|...+++|+.++
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 59999999999999998875443 56788874599999999974211 1123689999999999999
Q ss_pred ccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 68 ISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 68 ~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
.+ ..+-|+++|.|+|.|+||+.++.+..--. ....++.+|+.||.+.
T Consensus 172 Ie-----~FGGDp~NVTl~GeSAGa~si~~Lla~P~----AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IE-----AFGGDPQNVTLFGESAGAASILTLLAVPS----AKGLFHRAIALSGAAS 218 (491)
T ss_pred HH-----HhCCCccceEEeeccchHHHHHHhhcCcc----chHHHHHHHHhCCCCC
Confidence 87 77889999999999999998888776422 2346888889988775
No 84
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.60 E-value=1.4e-13 Score=98.93 Aligned_cols=183 Identities=16% Similarity=0.163 Sum_probs=98.5
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCC--cEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIP--AVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
.|+|+||-. .|+.+.....+.+.+++. + ..+..++.+.. .+++.+.+..+.+.. ..
T Consensus 1 ~ilYlHGF~---Ssp~S~Ka~~l~~~~~~~-~~~~~~~~p~l~~~--------p~~a~~~l~~~i~~~----------~~ 58 (187)
T PF05728_consen 1 MILYLHGFN---SSPQSFKAQALKQYFAEH-GPDIQYPCPDLPPF--------PEEAIAQLEQLIEEL----------KP 58 (187)
T ss_pred CeEEecCCC---CCCCCHHHHHHHHHHHHh-CCCceEECCCCCcC--------HHHHHHHHHHHHHhC----------CC
Confidence 389999933 344443333444445543 4 34555554432 344444444444443 34
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
+.+.|+|+|+||+.|..++.++ .+++ |+++|.+.............. .+... +....
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~--------~~~a-vLiNPav~p~~~l~~~iG~~~-~~~~~-------------e~~~~ 115 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERY--------GLPA-VLINPAVRPYELLQDYIGEQT-NPYTG-------------ESYEL 115 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHh--------CCCE-EEEcCCCCHHHHHHHhhCccc-cCCCC-------------cccee
Confidence 5599999999999999999886 3444 888898865432211110000 00000 00000
Q ss_pred CCCCCCCCCCCc-cccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHH
Q 041117 161 DYPAANTFGKHA-VDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVG 239 (249)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 239 (249)
+........... .... ..-++++++++.|.+++. ++...+.+ .+...+.+|++|.|..+ ++.+..|+
T Consensus 116 ~~~~~~~l~~l~~~~~~--~~~~~lvll~~~DEvLd~-~~a~~~~~----~~~~~i~~ggdH~f~~f-----~~~l~~i~ 183 (187)
T PF05728_consen 116 TEEHIEELKALEVPYPT--NPERYLVLLQTGDEVLDY-REAVAKYR----GCAQIIEEGGDHSFQDF-----EEYLPQII 183 (187)
T ss_pred chHhhhhcceEeccccC--CCccEEEEEecCCcccCH-HHHHHHhc----CceEEEEeCCCCCCccH-----HHHHHHHH
Confidence 000000000000 0011 222699999999999985 23233333 33455678889987755 78899999
Q ss_pred HHH
Q 041117 240 NFI 242 (249)
Q Consensus 240 ~fl 242 (249)
+|+
T Consensus 184 ~f~ 186 (187)
T PF05728_consen 184 AFL 186 (187)
T ss_pred Hhh
Confidence 987
No 85
>PRK05855 short chain dehydrogenase; Validated
Probab=99.60 E-value=2e-14 Score=122.61 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=58.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----CchhhHHHHHHHHHhhccCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----SQYDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
|+||++||.+ ++ ...|..+++.|++ +|.|+++|+|+++....+ ..+++..+.+..+.+...
T Consensus 26 ~~ivllHG~~---~~--~~~w~~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~------- 91 (582)
T PRK05855 26 PTVVLVHGYP---DN--HEVWDGVAPLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS------- 91 (582)
T ss_pred CeEEEEcCCC---ch--HHHHHHHHHHhhc--ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-------
Confidence 7899999965 22 2337888888843 899999999998765432 234555555555544431
Q ss_pred ccCCCceEEEecchhHHHHHHHHHH
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
...+++|+|||+||.+++.++.+
T Consensus 92 --~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 92 --PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred --CCCcEEEEecChHHHHHHHHHhC
Confidence 22459999999999999888765
No 86
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.58 E-value=5.3e-15 Score=123.58 Aligned_cols=110 Identities=27% Similarity=0.342 Sum_probs=85.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCC-cEEEeecCCCCCCC---------CCCCchhhHHHHHHHHHhhccC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIP-AVVISVNYRLAPEN---------RYPSQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g-~~v~~~d~r~~~~~---------~~~~~~~d~~~~~~~l~~~~~~ 70 (249)
+|||||+|||||..|+.... ....++.+.+ ++|+.++||+.+.. .....+.|...+++|+.+...
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~- 169 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIA- 169 (493)
T ss_pred CCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHH-
Confidence 59999999999998887652 2345565544 99999999975421 223458899999999999876
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
..+.|+++|.|+|+|+||.++..++..... ...++++|++|+...
T Consensus 170 ----~fggd~~~v~~~G~SaG~~~~~~~~~~~~~----~~lf~~~i~~sg~~~ 214 (493)
T cd00312 170 ----AFGGDPDSVTIFGESAGGASVSLLLLSPDS----KGLFHRAISQSGSAL 214 (493)
T ss_pred ----HhCCCcceEEEEeecHHHHHhhhHhhCcch----hHHHHHHhhhcCCcc
Confidence 567899999999999999999888875322 235888888887654
No 87
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.56 E-value=7.5e-15 Score=114.55 Aligned_cols=206 Identities=22% Similarity=0.255 Sum_probs=110.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC------------------CCC---------c
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR------------------YPS---------Q 53 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~------------------~~~---------~ 53 (249)
+|+||.+||.|. .... +... ..++. .|++|+.+|-|+-++.. ... .
T Consensus 83 ~Pavv~~hGyg~---~~~~--~~~~-~~~a~-~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 83 LPAVVQFHGYGG---RSGD--PFDL-LPWAA-AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp EEEEEEE--TT-----GGG--HHHH-HHHHH-TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred cCEEEEecCCCC---CCCC--cccc-ccccc-CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 489999999552 2111 3332 34566 49999999998743100 111 1
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED 133 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 133 (249)
+.|+..+++++....+ +|.++|++.|.|.||.+++.+|... .+|++++...|++..-........
T Consensus 156 ~~D~~ravd~l~slpe--------vD~~rI~v~G~SqGG~lal~~aaLd-------~rv~~~~~~vP~l~d~~~~~~~~~ 220 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPE--------VDGKRIGVTGGSQGGGLALAAAALD-------PRVKAAAADVPFLCDFRRALELRA 220 (320)
T ss_dssp HHHHHHHHHHHHTSTT--------EEEEEEEEEEETHHHHHHHHHHHHS-------ST-SEEEEESESSSSHHHHHHHT-
T ss_pred HHHHHHHHHHHHhCCC--------cCcceEEEEeecCchHHHHHHHHhC-------ccccEEEecCCCccchhhhhhcCC
Confidence 4677888888887765 8899999999999999999999853 379999999997743211000000
Q ss_pred ccCCCCccchhhHHHHHHhhCCCCCCCC--CCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHH--HHHHHHHCCC
Q 041117 134 LNDITPLVSLRRSDWMWTAFLPEGTDRD--YPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKR--HYQGLKRHGK 209 (249)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~--~~~~l~~~~~ 209 (249)
.. . +......+.+...+...... ......+ +..++.+....|+++..|-.|.++|++-. .+.++. .
T Consensus 221 ~~--~---~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~--D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~ 290 (320)
T PF05448_consen 221 DE--G---PYPEIRRYFRWRDPHHEREPEVFETLSYF--DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---G 290 (320)
T ss_dssp -S--T---TTHHHHHHHHHHSCTHCHHHHHHHHHHTT---HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC-----S
T ss_pred cc--c---cHHHHHHHHhccCCCcccHHHHHHHHhhh--hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC---C
Confidence 00 0 00111111111000000000 0000000 11123333446899999999999986533 334443 4
Q ss_pred ceEEEEeCCCceeeeecCCCChhHH-HHHHHHHHHhh
Q 041117 210 EAYLIEYPNAVHGFYIFPELHEGSF-IDDVGNFIRDQ 245 (249)
Q Consensus 210 ~~~~~~~~~~~H~~~~~~~~~~~~~-~~~~~~fl~~~ 245 (249)
+.++.+++..+|... ... .++.++||.++
T Consensus 291 ~K~l~vyp~~~He~~-------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 PKELVVYPEYGHEYG-------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp SEEEEEETT--SSTT-------HHHHHHHHHHHHHH-
T ss_pred CeeEEeccCcCCCch-------hhHHHHHHHHHHhcC
Confidence 689999999999533 444 88999999875
No 88
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.56 E-value=5.4e-14 Score=103.58 Aligned_cols=96 Identities=22% Similarity=0.322 Sum_probs=69.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCC--------chhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPS--------QYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~--------~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|++++.||||. | .-.|..++.++..+..++|+++|.|++++..... ...|+-+.++.+-.
T Consensus 75 pil~l~HG~G~---S--~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fg------- 142 (343)
T KOG2564|consen 75 PILLLLHGGGS---S--ALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFG------- 142 (343)
T ss_pred cEEEEeecCcc---c--chhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhc-------
Confidence 79999999885 2 2238999999999999999999999988765433 34455544444432
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhcccccccccccccccc
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPI 118 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 118 (249)
-.+.+|+|+||||||.+|.+.|.... -+.+.|++.+
T Consensus 143 ----e~~~~iilVGHSmGGaIav~~a~~k~-----lpsl~Gl~vi 178 (343)
T KOG2564|consen 143 ----ELPPQIILVGHSMGGAIAVHTAASKT-----LPSLAGLVVI 178 (343)
T ss_pred ----cCCCceEEEeccccchhhhhhhhhhh-----chhhhceEEE
Confidence 24578999999999999988887532 1235665554
No 89
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.55 E-value=2.1e-13 Score=103.49 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=122.0
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC------CCchhhHHHHHHHHHhhccCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY------PSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~------~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
.|.++++|| ..||... |+.+...|+.+.+..++++|.|..+..+. ....+|+..++++.....
T Consensus 52 ~Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~------ 120 (315)
T KOG2382|consen 52 APPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGST------ 120 (315)
T ss_pred CCceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHccccc------
Confidence 388999999 6677644 99999999999999999999997654432 333445555554443221
Q ss_pred CCccCCCceEEEecchhH-HHHHHHHHHhccccccccccccccc--cccC-CCCCCCC--cccccccCC-----------
Q 041117 75 PACADLKRCFVAGDSAGG-NLAHNVAVRANECKFSKLKLIGVIP--IQPF-FGGEERT--QSEEDLNDI----------- 137 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG-~~a~~~a~~~~~~~~~~~~~~~~i~--~~p~-~~~~~~~--~~~~~~~~~----------- 137 (249)
...++.|.|||||| -+++..+.+.++ .+..+|. ++|. +...... .........
T Consensus 121 ----~~~~~~l~GHsmGG~~~~m~~t~~~p~------~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rk 190 (315)
T KOG2382|consen 121 ----RLDPVVLLGHSMGGVKVAMAETLKKPD------LIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRK 190 (315)
T ss_pred ----ccCCceecccCcchHHHHHHHHHhcCc------ccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHH
Confidence 34789999999999 555555555332 3333333 3442 1111100 000000000
Q ss_pred ------CCccchhhHHHHHHhhCCCC--CCCCCCCCCCC-----------CCCccccc-cCCCCcEEEEecCCCcchhhH
Q 041117 138 ------TPLVSLRRSDWMWTAFLPEG--TDRDYPAANTF-----------GKHAVDIS-RVDIPATIVIVGGFDPLKDWQ 197 (249)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------~~~~~~~~-~~~~pP~li~~g~~D~~~~~~ 197 (249)
...........+...-+... ...-.+..+.. .....++. ....-|||+++|.++..++
T Consensus 191 e~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~-- 268 (315)
T KOG2382|consen 191 EALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP-- 268 (315)
T ss_pred HHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC--
Confidence 00011111112222222110 00000111100 00001111 0122379999999999997
Q ss_pred HHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 198 KRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
......+++.-.++++++++.+||+.....+ +++++.+.+|+.++.
T Consensus 269 ~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P---~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 269 DEHYPRMEKIFPNVEVHELDEAGHWVHLEKP---EEFIESISEFLEEPE 314 (315)
T ss_pred hhHHHHHHHhccchheeecccCCceeecCCH---HHHHHHHHHHhcccC
Confidence 3333444444457999999999998777665 999999999998753
No 90
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.55 E-value=8.9e-15 Score=123.58 Aligned_cols=111 Identities=26% Similarity=0.330 Sum_probs=79.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC-------CCCC---CCCchhhHHHHHHHHHhhccC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA-------PENR---YPSQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-------~~~~---~~~~~~d~~~~~~~l~~~~~~ 70 (249)
+||+||||||||..|+.....+ ....++.+.+++||.++||+. ++.. ....+.|...+++|+++...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~- 201 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA- 201 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG-
T ss_pred cceEEEeecccccCCCcccccc--cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh-
Confidence 5999999999999998743222 223333344999999999973 2222 34568899999999999997
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..+.|+++|.|+|+|+||..+..++.... ....++++|+.|+..
T Consensus 202 ----~FGGDp~~VTl~G~SAGa~sv~~~l~sp~----~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 202 ----AFGGDPDNVTLFGQSAGAASVSLLLLSPS----SKGLFHRAILQSGSA 245 (535)
T ss_dssp ----GGTEEEEEEEEEEETHHHHHHHHHHHGGG----GTTSBSEEEEES--T
T ss_pred ----hcccCCcceeeeeecccccccceeeeccc----ccccccccccccccc
Confidence 77889999999999999999988888633 234699999998843
No 91
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.55 E-value=3.4e-13 Score=95.71 Aligned_cols=176 Identities=19% Similarity=0.245 Sum_probs=117.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC--------------------C-CCCCchhhHHHHH
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE--------------------N-RYPSQYDDGIDVL 61 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--------------------~-~~~~~~~d~~~~~ 61 (249)
+|||+||-| . +...|..+++.+..+ +...+.|.-+-.|- . ..........+.+
T Consensus 5 tIi~LHglG----D-sg~~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i 78 (206)
T KOG2112|consen 5 TIIFLHGLG----D-SGSGWAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNI 78 (206)
T ss_pred EEEEEecCC----C-CCccHHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHH
Confidence 799999954 2 122256666665443 55566553221110 0 0112234455566
Q ss_pred HHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCcc
Q 041117 62 KFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLV 141 (249)
Q Consensus 62 ~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~ 141 (249)
.+|.+... ..+++.++|++.|.|+||.+++..+..+ +..+.+++..+++.......- ..
T Consensus 79 ~~Li~~e~-----~~Gi~~~rI~igGfs~G~a~aL~~~~~~------~~~l~G~~~~s~~~p~~~~~~-----~~----- 137 (206)
T KOG2112|consen 79 ANLIDNEP-----ANGIPSNRIGIGGFSQGGALALYSALTY------PKALGGIFALSGFLPRASIGL-----PG----- 137 (206)
T ss_pred HHHHHHHH-----HcCCCccceeEcccCchHHHHHHHHhcc------ccccceeeccccccccchhhc-----cC-----
Confidence 77666553 6678899999999999999999999985 236777777776653211100 00
Q ss_pred chhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCC
Q 041117 142 SLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNA 219 (249)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~ 219 (249)
. +.....+|++..||+.|+++|. +.+..+.++..+..++++.|+|.
T Consensus 138 -----------~---------------------~~~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~ 185 (206)
T KOG2112|consen 138 -----------W---------------------LPGVNYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGL 185 (206)
T ss_pred -----------C---------------------ccccCcchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCc
Confidence 0 0000136799999999999984 47778888988888999999999
Q ss_pred ceeeeecCCCChhHHHHHHHHHHHh
Q 041117 220 VHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 220 ~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
+|... .+-++++..|+..
T Consensus 186 ~h~~~-------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 186 GHSTS-------PQELDDLKSWIKT 203 (206)
T ss_pred ccccc-------HHHHHHHHHHHHH
Confidence 99543 6888899999886
No 92
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.54 E-value=7.7e-14 Score=103.22 Aligned_cols=176 Identities=18% Similarity=0.217 Sum_probs=90.4
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED 133 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 133 (249)
+|-..++++||++... ++.++|.|+|.|.||-+|+.+|..++ .++++|.++|..-..........
T Consensus 3 LEyfe~Ai~~L~~~p~--------v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~~~~ 67 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE--------VDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGFYRD 67 (213)
T ss_dssp CHHHHHHHHHHHCSTT--------B--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEEETT
T ss_pred hHHHHHHHHHHHhCCC--------CCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhcccC
Confidence 4667899999999875 78899999999999999999999864 78999999885433221111111
Q ss_pred ccCCCCccchhhHHHHHHhhCCCCCCCCC----CCCCCCCCCccccccCCCCcEEEEecCCCcchhh---HHHHHHHHHH
Q 041117 134 LNDITPLVSLRRSDWMWTAFLPEGTDRDY----PAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW---QKRHYQGLKR 206 (249)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~ 206 (249)
.....+.+........+ ..+....... ..........-.+.+. ..|+|+++|++|.+.|. +..+.+++++
T Consensus 68 ~~~~lp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i-~~piLli~g~dD~~WpS~~~a~~i~~rL~~ 144 (213)
T PF08840_consen 68 SSKPLPYLPFDISKFSW--NEPGLLRSRYAFELADDKAVEEARIPVEKI-KGPILLISGEDDQIWPSSEMAEQIEERLKA 144 (213)
T ss_dssp E--EE----B-GGG-EE---TTS-EE-TT-B--TTTGGGCCCB--GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHC
T ss_pred CCccCCcCCcChhhcee--cCCcceehhhhhhcccccccccccccHHHc-CCCEEEEEeCCCCccchHHHHHHHHHHHHH
Confidence 00001111111000000 0000000000 0000000000011112 24799999999998863 3566678888
Q ss_pred CCCc--eEEEEeCCCceeeee--cCCCC----------------------h-hHHHHHHHHHHHhhhc
Q 041117 207 HGKE--AYLIEYPNAVHGFYI--FPELH----------------------E-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 207 ~~~~--~~~~~~~~~~H~~~~--~~~~~----------------------~-~~~~~~~~~fl~~~~~ 247 (249)
++.+ ++++.|+++||.+.. .+... . ++.++.+++||+++|+
T Consensus 145 ~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 145 AGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp TT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred hCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7754 889999999998542 11110 2 5789999999999986
No 93
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.52 E-value=4.3e-13 Score=98.11 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=84.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
||+|+|+||-. .....|..+++.+++. ||+|++++.-..-.-.....+++....++|+.+.+..+=-.....+.
T Consensus 46 yPVilF~HG~~-----l~ns~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 46 YPVILFLHGFN-----LYNSFYSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred ccEEEEeechh-----hhhHHHHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 79999999933 2344589999999995 99999998654322233455678888899998764311111223567
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
+++.++|||.||-.|..+|+.+. ....++++|.+.|+-...
T Consensus 120 ~klal~GHSrGGktAFAlALg~a----~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA----TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc----ccCchhheecccccCCCC
Confidence 89999999999999999999764 234789999998876543
No 94
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=1.5e-12 Score=94.85 Aligned_cols=212 Identities=14% Similarity=0.113 Sum_probs=114.3
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKR 82 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~ 82 (249)
++.|-|-|| ++.. |+.|.+++-. .+.++.+.|+|...........|+....+.+..... . .....+
T Consensus 10 L~cfP~AGG----sa~~--fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~-----~-~~~d~P 75 (244)
T COG3208 10 LFCFPHAGG----SASL--FRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELL-----P-PLLDAP 75 (244)
T ss_pred EEEecCCCC----CHHH--HHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhc-----c-ccCCCC
Confidence 345556565 3333 7777776654 588999999998776666666666666666655542 1 133468
Q ss_pred eEEEecchhHHHHHHHHHHhccccccccccccccccc---cCCCCCCCCcc---------cccccCC-CCccchhhHHHH
Q 041117 83 CFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ---PFFGGEERTQS---------EEDLNDI-TPLVSLRRSDWM 149 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~---p~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~ 149 (249)
+.++||||||.+|..+|.++...+. .+.++++.+ |..+....... ....... ..++.......+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~---~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l 152 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGL---PPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMAL 152 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCC---CcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHH
Confidence 9999999999999999999887665 355655543 21111000000 0000000 001111111111
Q ss_pred HHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC
Q 041117 150 WTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL 229 (249)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 229 (249)
..-.+ ..+...+..|.-.. . .. -..|+.++.|++|..+. ...+...-+..+...++++++| ||.|.....
T Consensus 153 ~LPil----RAD~~~~e~Y~~~~-~-~p-l~~pi~~~~G~~D~~vs-~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~- 222 (244)
T COG3208 153 FLPIL----RADFRALESYRYPP-P-AP-LACPIHAFGGEKDHEVS-RDELGAWREHTKGDFTLRVFDG-GHFFLNQQR- 222 (244)
T ss_pred HHHHH----HHHHHHhcccccCC-C-CC-cCcceEEeccCcchhcc-HHHHHHHHHhhcCCceEEEecC-cceehhhhH-
Confidence 11000 00111111111000 0 00 11479999999999885 2233334444456899999998 996553222
Q ss_pred ChhHHHHHHHHHHH
Q 041117 230 HEGSFIDDVGNFIR 243 (249)
Q Consensus 230 ~~~~~~~~~~~fl~ 243 (249)
+++.+.+.+.+.
T Consensus 223 --~~v~~~i~~~l~ 234 (244)
T COG3208 223 --EEVLARLEQHLA 234 (244)
T ss_pred --HHHHHHHHHHhh
Confidence 555665555554
No 95
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.49 E-value=2.9e-12 Score=106.01 Aligned_cols=110 Identities=12% Similarity=0.131 Sum_probs=71.1
Q ss_pred CEEEEEecC---ccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC----Cc-hhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGG---GFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP----SQ-YDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGg---g~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~-~~d~~~~~~~l~~~~~~~~~ 73 (249)
+.||++||- .++.. ....+.+++.|+++ ||.|+++|+++.+..... +. .+++.++++.+.+..
T Consensus 189 ~PlLiVp~~i~k~yilD---L~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~----- 259 (532)
T TIGR01838 189 TPLLIVPPWINKYYILD---LRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT----- 259 (532)
T ss_pred CcEEEECcccccceeee---cccchHHHHHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-----
Confidence 578999992 22111 11125789999986 999999999975533222 12 234666777776553
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
+.++++++|||+||.+++.++..+...+ .+.+++++++++..++...
T Consensus 260 -----g~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 260 -----GEKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred -----CCCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCCCC
Confidence 5689999999999998644222111110 1347899999888777654
No 96
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.48 E-value=3.2e-12 Score=107.92 Aligned_cols=107 Identities=15% Similarity=0.003 Sum_probs=77.9
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----C-CCchhhHHHHHHHHHhhccCCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----Y-PSQYDDGIDVLKFIDTKISTVEDF 74 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~-~~~~~d~~~~~~~l~~~~~~~~~~ 74 (249)
+|+||++||.|...+.. ..........++++ ||.|+++|+|+.+... . ....+|+.++++|+..+.
T Consensus 22 ~P~Il~~~gyg~~~~~~-~~~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~------ 93 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLR-WGLDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQP------ 93 (550)
T ss_pred CCEEEEecCCCCchhhc-cccccccHHHHHhC-CcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCC------
Confidence 58999999955311100 01112345667775 9999999999865432 2 556899999999998764
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
....+|+++|+|+||.+++.+|.. .+..+++++..++..+.
T Consensus 94 ---~~~~~v~~~G~S~GG~~a~~~a~~------~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 94 ---WCDGNVGMLGVSYLAVTQLLAAVL------QPPALRAIAPQEGVWDL 134 (550)
T ss_pred ---CCCCcEEEEEeChHHHHHHHHhcc------CCCceeEEeecCcccch
Confidence 234799999999999999999987 44578999988887654
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.47 E-value=5e-13 Score=105.57 Aligned_cols=210 Identities=17% Similarity=0.128 Sum_probs=107.0
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC---CC-CchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR---YP-SQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---~~-~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
|+||++-| . .+-....+..+.+.++.+ |++++++|.++.+... +. +.-.-....++||.+...
T Consensus 191 P~VIv~gG-l---Ds~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~-------- 257 (411)
T PF06500_consen 191 PTVIVCGG-L---DSLQEDLYRLFRDYLAPR-GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPW-------- 257 (411)
T ss_dssp EEEEEE---T---TS-GGGGHHHHHCCCHHC-T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTT--------
T ss_pred CEEEEeCC-c---chhHHHHHHHHHHHHHhC-CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCc--------
Confidence 66666555 2 122222233344456665 9999999999865532 11 222234556788877664
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEG 157 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (249)
+|.++|.++|.|+||++|..+|.. .+.+++++|...|.+..-..... .... .|. ...+. +...++..
T Consensus 258 VD~~RV~~~G~SfGGy~AvRlA~l------e~~RlkavV~~Ga~vh~~ft~~~--~~~~-~P~---my~d~-LA~rlG~~ 324 (411)
T PF06500_consen 258 VDHTRVGAWGFSFGGYYAVRLAAL------EDPRLKAVVALGAPVHHFFTDPE--WQQR-VPD---MYLDV-LASRLGMA 324 (411)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH------TTTT-SEEEEES---SCGGH-HH--HHTT-S-H---HHHHH-HHHHCT-S
T ss_pred cChhheEEEEeccchHHHHHHHHh------cccceeeEeeeCchHhhhhccHH--HHhc-CCH---HHHHH-HHHHhCCc
Confidence 899999999999999999999975 34589999999887643221111 1111 111 11111 11111111
Q ss_pred CCCCC---CCCCCCCCCccccc--cCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCc-eeeeecCCCCh
Q 041117 158 TDRDY---PAANTFGKHAVDIS--RVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAV-HGFYIFPELHE 231 (249)
Q Consensus 158 ~~~~~---~~~~~~~~~~~~~~--~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-H~~~~~~~~~~ 231 (249)
..... .....++-....+- +.-..|+|.+.|++|++.| .+-.+.+...+.+-+...++... |.-.
T Consensus 325 ~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P--~eD~~lia~~s~~gk~~~~~~~~~~~gy------- 395 (411)
T PF06500_consen 325 AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSP--IEDSRLIAESSTDGKALRIPSKPLHMGY------- 395 (411)
T ss_dssp CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS---HHHHHHHHHTBTT-EEEEE-SSSHHHHH-------
T ss_pred cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCC--HHHHHHHHhcCCCCceeecCCCccccch-------
Confidence 00000 00111221111111 1122379999999999998 44445555555566666666433 5321
Q ss_pred hHHHHHHHHHHHhhh
Q 041117 232 GSFIDDVGNFIRDQS 246 (249)
Q Consensus 232 ~~~~~~~~~fl~~~~ 246 (249)
++.+..+.+||++.+
T Consensus 396 ~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 396 PQALDEIYKWLEDKL 410 (411)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 799999999999875
No 98
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.47 E-value=1.3e-12 Score=117.24 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=63.0
Q ss_pred CEEEEEecCccccCCCCccchhH-----HHHHHHHhCCcEEEeecCCCCCCC--CCCCchhhHH-HHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDD-----HCRRLAKEIPAVVISVNYRLAPEN--RYPSQYDDGI-DVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~-----~~~~l~~~~g~~v~~~d~r~~~~~--~~~~~~~d~~-~~~~~l~~~~~~~~~ 73 (249)
|+||++||.+ .+ ...|.. +++.|.++ ||.|+++|+..+... .....+.|.. ..++.+.....
T Consensus 68 ~plllvhg~~---~~--~~~~d~~~~~s~v~~L~~~-g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~---- 137 (994)
T PRK07868 68 PPVLMVHPMM---MS--ADMWDVTRDDGAVGILHRA-GLDPWVIDFGSPDKVEGGMERNLADHVVALSEAIDTVKD---- 137 (994)
T ss_pred CcEEEECCCC---CC--ccceecCCcccHHHHHHHC-CCEEEEEcCCCCChhHcCccCCHHHHHHHHHHHHHHHHH----
Confidence 6899999944 12 222433 47888885 999999998532211 1112222222 22222211100
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
...++++++||||||.+++.++... .+.++++++++++.++.
T Consensus 138 ----~~~~~v~lvG~s~GG~~a~~~aa~~-----~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 138 ----VTGRDVHLVGYSQGGMFCYQAAAYR-----RSKDIASIVTFGSPVDT 179 (994)
T ss_pred ----hhCCceEEEEEChhHHHHHHHHHhc-----CCCccceEEEEeccccc
Confidence 1236899999999999999998753 33478898887766554
No 99
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.47 E-value=2.9e-13 Score=109.53 Aligned_cols=213 Identities=15% Similarity=0.115 Sum_probs=144.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----------CCCchhhHHHHHHHHHhhccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----------YPSQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~ 70 (249)
|++|+-.||--+ +....|......+.++ |.+.+..|.||.++.. ....++|..++.+.|.++.-
T Consensus 422 pTll~aYGGF~v---sltP~fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgi- 496 (648)
T COG1505 422 PTLLYAYGGFNI---SLTPRFSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGI- 496 (648)
T ss_pred ceEEEecccccc---ccCCccchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCC-
Confidence 566666654322 3344466666666776 8899999999977643 34558899999999887764
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHH
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMW 150 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (249)
..++++.+.|-|-||.+......+ .|..+.+++.-.|++|+-... ....-..+.
T Consensus 497 -------tspe~lgi~GgSNGGLLvg~alTQ------rPelfgA~v~evPllDMlRYh-------------~l~aG~sW~ 550 (648)
T COG1505 497 -------TSPEKLGIQGGSNGGLLVGAALTQ------RPELFGAAVCEVPLLDMLRYH-------------LLTAGSSWI 550 (648)
T ss_pred -------CCHHHhhhccCCCCceEEEeeecc------ChhhhCceeeccchhhhhhhc-------------ccccchhhH
Confidence 467899999999999998888777 455899999999988763211 111111222
Q ss_pred HhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcch-h-hHHHHHHHHHHCCCceEEEEeCCCceeeeecCC
Q 041117 151 TAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLK-D-WQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPE 228 (249)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 228 (249)
..|-.+....+...+..++|.+.--...+.||+||..|.+|.-| | ++++|+.+|++.+.++-+++--++||.-. .+
T Consensus 551 ~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~--~~ 628 (648)
T COG1505 551 AEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGA--AP 628 (648)
T ss_pred hhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCC--CC
Confidence 22332233333333334455442222358899999999999766 5 57999999999999999999999999532 12
Q ss_pred CCh-hHHHHHHHHHHHhhhc
Q 041117 229 LHE-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 229 ~~~-~~~~~~~~~fl~~~~~ 247 (249)
..+ ......+..||.+.|+
T Consensus 629 ~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 629 TAEIARELADLLAFLLRTLG 648 (648)
T ss_pred hHHHHHHHHHHHHHHHHhhC
Confidence 222 5566677788887763
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.45 E-value=1.3e-11 Score=83.60 Aligned_cols=178 Identities=15% Similarity=0.199 Sum_probs=107.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC---------CCCCCCCchhhHHHHHHHHHhhccCCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA---------PENRYPSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~---------~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
+||+-||-| ++.++......+..|+.+ |+.|..++++.. |.....+.......++..+....
T Consensus 16 tilLaHGAG---asmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l----- 86 (213)
T COG3571 16 TILLAHGAG---ASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL----- 86 (213)
T ss_pred EEEEecCCC---CCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-----
Confidence 688999955 345555567778888886 999999986421 11111222334444445554443
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccc-cCCCCCCCCcccccccCCCCccchhhHHHHHHh
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ-PFFGGEERTQSEEDLNDITPLVSLRRSDWMWTA 152 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (249)
...++++.|+||||-++++++..... .|.+++++. |+...-. .++
T Consensus 87 -----~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGK-------------------Pe~---- 132 (213)
T COG3571 87 -----AEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGK-------------------PEQ---- 132 (213)
T ss_pred -----cCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCC-------------------ccc----
Confidence 45689999999999999999987532 477777763 3321100 000
Q ss_pred hCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC---
Q 041117 153 FLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL--- 229 (249)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--- 229 (249)
...+.+...+ .|++|.||+.|++-.- .+++... ...+++++.++++.|..--..-.
T Consensus 133 -----------------~Rt~HL~gl~-tPtli~qGtrD~fGtr-~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgl 191 (213)
T COG3571 133 -----------------LRTEHLTGLK-TPTLITQGTRDEFGTR-DEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGL 191 (213)
T ss_pred -----------------chhhhccCCC-CCeEEeecccccccCH-HHHHhhh--cCCceEEEEeccCccccccccccccc
Confidence 0111222223 4699999999997741 2222222 23579999999999975432211
Q ss_pred ---Ch-hHHHHHHHHHHHh
Q 041117 230 ---HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 230 ---~~-~~~~~~~~~fl~~ 244 (249)
.. ....++|..|+..
T Consensus 192 s~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 192 STADHLKTLAEQVAGWARR 210 (213)
T ss_pred cHHHHHHHHHHHHHHHHhh
Confidence 11 4566667777654
No 101
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.45 E-value=5.8e-13 Score=106.97 Aligned_cols=61 Identities=20% Similarity=0.165 Sum_probs=47.8
Q ss_pred CcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCC-CceeeeecCCCChhHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPN-AVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
.|+|+++|++|.++|. ..++.+.+...+.+++++++++ .||......+ +++.+.+.+||++
T Consensus 324 ~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p---~~~~~~I~~FL~~ 387 (389)
T PRK06765 324 ANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDI---HLFEKKIYEFLNR 387 (389)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCH---HHHHHHHHHHHcc
Confidence 4699999999998863 4667777766556799999985 8996554333 8899999999976
No 102
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.45 E-value=1.5e-11 Score=99.41 Aligned_cols=188 Identities=15% Similarity=0.117 Sum_probs=111.6
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCC----cEEEeecCCCCCCC--CCCC--ch-hhH-HHHHHHHHhhccC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIP----AVVISVNYRLAPEN--RYPS--QY-DDG-IDVLKFIDTKIST 70 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~~~~--~~~~--~~-~d~-~~~~~~l~~~~~~ 70 (249)
+|+|+++||..|.. .......+..+.++ | ++++.+|....... .++. .+ +.+ .+.+.++.+..
T Consensus 209 ~PvlyllDG~~w~~----~~~~~~~ld~li~~-g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y-- 281 (411)
T PRK10439 209 RPLAILLDGQFWAE----SMPVWPALDSLTHR-GQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIA-- 281 (411)
T ss_pred CCEEEEEECHHhhh----cCCHHHHHHHHHHc-CCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhC--
Confidence 69999999987632 11134556677665 4 34677765211111 1111 11 111 12234444332
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHH
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMW 150 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (249)
....++++.+|+|+||||..|+.++.++ +..+.+++.+||.+-..... .. . ..++.
T Consensus 282 ----~~~~d~~~~~IaG~S~GGl~AL~~al~~------Pd~Fg~v~s~Sgs~ww~~~~------~~-----~---~~~l~ 337 (411)
T PRK10439 282 ----PFSDDADRTVVAGQSFGGLAALYAGLHW------PERFGCVLSQSGSFWWPHRG------GQ-----Q---EGVLL 337 (411)
T ss_pred ----CCCCCccceEEEEEChHHHHHHHHHHhC------cccccEEEEeccceecCCcc------CC-----c---hhHHH
Confidence 2234678899999999999999999994 45899999999875322110 00 0 00111
Q ss_pred HhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCC-cchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC
Q 041117 151 TAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFD-PLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL 229 (249)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 229 (249)
..+.. . .... ....++|-+|+.| .+++.+..+.+.|+++|.++++.+++| ||.+..+
T Consensus 338 ~~l~~-~----------------~~~~-~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~W--- 395 (411)
T PRK10439 338 EQLKA-G----------------EVSA-RGLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDALCW--- 395 (411)
T ss_pred HHHHh-c----------------ccCC-CCceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHH---
Confidence 11100 0 0000 1124889999988 455667999999999999999999998 7976655
Q ss_pred ChhHHHHHHHHHHH
Q 041117 230 HEGSFIDDVGNFIR 243 (249)
Q Consensus 230 ~~~~~~~~~~~fl~ 243 (249)
...+.+.+.||-
T Consensus 396 --r~~L~~~L~~l~ 407 (411)
T PRK10439 396 --RGGLIQGLIDLW 407 (411)
T ss_pred --HHHHHHHHHHHh
Confidence 344555555553
No 103
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.45 E-value=3.8e-12 Score=110.18 Aligned_cols=212 Identities=13% Similarity=0.066 Sum_probs=121.1
Q ss_pred HHHHHHHhCCcEEEeecCCCCCCCC------CCCchhhHHHHHHHHHhhccC------CCCCCCccCCCceEEEecchhH
Q 041117 25 HCRRLAKEIPAVVISVNYRLAPENR------YPSQYDDGIDVLKFIDTKIST------VEDFPACADLKRCFVAGDSAGG 92 (249)
Q Consensus 25 ~~~~l~~~~g~~v~~~d~r~~~~~~------~~~~~~d~~~~~~~l~~~~~~------~~~~~~~~~~~~i~l~G~S~GG 92 (249)
+...++.+ ||+|+..|.||..++. .....+|..++++|+.....- =.+.+......+|.++|.|+||
T Consensus 271 ~~~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 45667775 9999999999875432 134468899999999854210 0000122346799999999999
Q ss_pred HHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCc-------cch------------hhHHHHHHhh
Q 041117 93 NLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPL-------VSL------------RRSDWMWTAF 153 (249)
Q Consensus 93 ~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~-------~~~------------~~~~~~~~~~ 153 (249)
.+++.+|.. .++.++++|..+++.+........-.......+ +.. ......+..+
T Consensus 350 ~~~~~aAa~------~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~ 423 (767)
T PRK05371 350 TLPNAVATT------GVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKL 423 (767)
T ss_pred HHHHHHHhh------CCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHH
Confidence 999999887 455789999888776542211000000000000 000 0000011111
Q ss_pred CCC---CCCCC-CCCCCCCC--CCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCceeeee
Q 041117 154 LPE---GTDRD-YPAANTFG--KHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVHGFYI 225 (249)
Q Consensus 154 ~~~---~~~~~-~~~~~~~~--~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 225 (249)
... ..... ........ .....+.+.+ .|+|++||..|..++ ++.++.+++++.+.+.++.+.++ +|....
T Consensus 424 ~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIk-vPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~ 501 (767)
T PRK05371 424 LAELTAAQDRKTGDYNDFWDDRNYLKDADKIK-ASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPN 501 (767)
T ss_pred HhhhhhhhhhcCCCccHHHHhCCHhhHhhCCC-CCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCC
Confidence 000 00000 00000000 0011222233 569999999999885 46788999998888888877765 785332
Q ss_pred cCCCChhHHHHHHHHHHHhhhc
Q 041117 226 FPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 226 ~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
.. ...++.+.+.+|+..+|.
T Consensus 502 ~~--~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 502 NW--QSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred ch--hHHHHHHHHHHHHHhccc
Confidence 11 116778889999998875
No 104
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.45 E-value=1.7e-13 Score=96.27 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=124.7
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----CCC--chhhHHHHHHHHHhhccCCCCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----YPS--QYDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~~~--~~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
.|+++.| ..||... .|.+.+..+.....+.+++.|-++.+.+. ++. ..+|...+++-+...
T Consensus 44 ~iLlipG---alGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-------- 111 (277)
T KOG2984|consen 44 YILLIPG---ALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-------- 111 (277)
T ss_pred eeEeccc---ccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh--------
Confidence 3667777 3355333 27778888877767899999988764433 322 257777777766543
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCC----c-------cccccc-CCCCccch
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERT----Q-------SEEDLN-DITPLVSL 143 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~----~-------~~~~~~-~~~~~~~~ 143 (249)
+.+++.|+|+|-||..|+..|.++.+ .+..++......-..... . ...+.. .....+..
T Consensus 112 ---k~~~fsvlGWSdGgiTalivAak~~e------~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~ 182 (277)
T KOG2984|consen 112 ---KLEPFSVLGWSDGGITALIVAAKGKE------KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGP 182 (277)
T ss_pred ---CCCCeeEeeecCCCeEEEEeeccChh------hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCH
Confidence 56899999999999999999998543 566666654322111100 0 000000 00112233
Q ss_pred hhHHHHHHhhCCC----CCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh-HHHHHHHHHHCCCceEEEEeCC
Q 041117 144 RRSDWMWTAFLPE----GTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW-QKRHYQGLKRHGKEAYLIEYPN 218 (249)
Q Consensus 144 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 218 (249)
+.....|...+.. ....+...+... +.+.+ .|+||+||+.|++++. ..-+...++ .-.++++++.
T Consensus 183 e~f~~~wa~wvD~v~qf~~~~dG~fCr~~------lp~vk-cPtli~hG~kDp~~~~~hv~fi~~~~---~~a~~~~~pe 252 (277)
T KOG2984|consen 183 ETFRTQWAAWVDVVDQFHSFCDGRFCRLV------LPQVK-CPTLIMHGGKDPFCGDPHVCFIPVLK---SLAKVEIHPE 252 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchHhhh------ccccc-CCeeEeeCCcCCCCCCCCccchhhhc---ccceEEEccC
Confidence 3333333332211 011111112211 12223 4699999999999963 233333333 3568999999
Q ss_pred CceeeeecCCCChhHHHHHHHHHHHhh
Q 041117 219 AVHGFYIFPELHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 219 ~~H~~~~~~~~~~~~~~~~~~~fl~~~ 245 (249)
++|++.+.-. +++...+.+||++.
T Consensus 253 GkHn~hLrya---~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 253 GKHNFHLRYA---KEFNKLVLDFLKST 276 (277)
T ss_pred CCcceeeech---HHHHHHHHHHHhcc
Confidence 9999887655 89999999999864
No 105
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.43 E-value=9.3e-13 Score=93.16 Aligned_cols=214 Identities=14% Similarity=0.156 Sum_probs=122.8
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC--CC-----CC-------CC-C----CCchhhHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR--LA-----PE-------NR-Y----PSQYDDGIDVL 61 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r--~~-----~~-------~~-~----~~~~~d~~~~~ 61 (249)
.|++.|+-| .+-......-....++.|+++|++|+.||-. +. ++ .. + ...+..-...+
T Consensus 44 ~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 44 CPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 388999998 2223333223455677888899999999953 21 11 00 0 11122222344
Q ss_pred HHHHhhccC-CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCc
Q 041117 62 KFIDTKIST-VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPL 140 (249)
Q Consensus 62 ~~l~~~~~~-~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~ 140 (249)
+|+.+.+.+ +.+....+++.++.|.||||||+-|+..+++ .+.+.+.+-.++|+++...-..-...+.. ++
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk------n~~kykSvSAFAPI~NP~~cpWGqKAf~g--YL 192 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK------NPSKYKSVSAFAPICNPINCPWGQKAFTG--YL 192 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc------CcccccceeccccccCcccCcchHHHhhc--cc
Confidence 554433221 1123455788899999999999999999887 44578888889998876543222221111 00
Q ss_pred cchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH---HHHHHHHHHC-CCceEEEEe
Q 041117 141 VSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ---KRHYQGLKRH-GKEAYLIEY 216 (249)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~---~~~~~~l~~~-~~~~~~~~~ 216 (249)
.. ...-|..|...... ......... +||-+|..|.+.+.. ..+.++.+.. ..++.++.-
T Consensus 193 -G~--~ka~W~~yDat~li-------------k~y~~~~~~-ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~ 255 (283)
T KOG3101|consen 193 -GD--NKAQWEAYDATHLI-------------KNYRGVGDD-ILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQ 255 (283)
T ss_pred -CC--ChHHHhhcchHHHH-------------HhcCCCCcc-EEEecCccchhhhhhcChHHHHHHhhccccccEEEEee
Confidence 00 11112222111100 011111223 899999999888632 4455555533 368999999
Q ss_pred CCCceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 217 PNAVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 217 ~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
+|-+|.+... ..++.+-+++-.+.|+
T Consensus 256 ~gyDHSYyfI-----aTFv~dHi~hHA~~L~ 281 (283)
T KOG3101|consen 256 EGYDHSYYFI-----ATFVADHIEHHAKNLN 281 (283)
T ss_pred cCCCcceeee-----hhhhHHHHHHHHHHhc
Confidence 9999997765 5666666666655554
No 106
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.43 E-value=2.6e-12 Score=102.72 Aligned_cols=187 Identities=19% Similarity=0.178 Sum_probs=98.5
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC--------C-----C-------------CCCc-
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE--------N-----R-------------YPSQ- 53 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--------~-----~-------------~~~~- 53 (249)
+|+|||-||-| |++.. |..++..||++ ||+|+++|+|-... . . +...
T Consensus 100 ~PvvIFSHGlg---g~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 100 FPVVIFSHGLG---GSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp EEEEEEE--TT-----TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCEEEEeCCCC---cchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 69999999943 45555 89999999996 99999999984210 0 0 0000
Q ss_pred ---------------hhhHHHHHHHHHhhcc------------CCCCCCCccCCCceEEEecchhHHHHHHHHHHhcccc
Q 041117 54 ---------------YDDGIDVLKFIDTKIS------------TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECK 106 (249)
Q Consensus 54 ---------------~~d~~~~~~~l~~~~~------------~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~ 106 (249)
..|+..+++.|.+... ++..++-.+|.++|.++|||+||..++..+.+.
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d---- 249 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD---- 249 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc----
Confidence 2344445555543110 011233456788999999999999999888764
Q ss_pred ccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEE
Q 041117 107 FSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVI 186 (249)
Q Consensus 107 ~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~ 186 (249)
.+++++|++-||+..-.. . ...... .|+|++
T Consensus 250 ---~r~~~~I~LD~W~~Pl~~----------------~-----------------------------~~~~i~-~P~L~I 280 (379)
T PF03403_consen 250 ---TRFKAGILLDPWMFPLGD----------------E-----------------------------IYSKIP-QPLLFI 280 (379)
T ss_dssp ---TT--EEEEES---TTS-G----------------G-----------------------------GGGG---S-EEEE
T ss_pred ---cCcceEEEeCCcccCCCc----------------c-----------------------------cccCCC-CCEEEE
Confidence 479999999887632100 0 000012 369999
Q ss_pred ecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeee----cCC-------------CCh---hHHHHHHHHHHHhhh
Q 041117 187 VGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYI----FPE-------------LHE---GSFIDDVGNFIRDQS 246 (249)
Q Consensus 187 ~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~-------------~~~---~~~~~~~~~fl~~~~ 246 (249)
.++. ..........+.+...+.+..+..+.|..|.-+. ..+ .++ +...+.+++||+++|
T Consensus 281 nSe~-f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L 359 (379)
T PF03403_consen 281 NSES-FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHL 359 (379)
T ss_dssp EETT-T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred ECcc-cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 8775 2222222222223334567889999999997221 111 122 667788899999987
Q ss_pred c
Q 041117 247 A 247 (249)
Q Consensus 247 ~ 247 (249)
+
T Consensus 360 ~ 360 (379)
T PF03403_consen 360 G 360 (379)
T ss_dssp T
T ss_pred C
Confidence 5
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.42 E-value=3.9e-12 Score=93.57 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=69.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC--CCCCC----------CCchhhHHHHHHHHHhhc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA--PENRY----------PSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~----------~~~~~d~~~~~~~l~~~~ 68 (249)
+|+||++||.+ ++.....-..-...++++.||+|+-|+-... ....+ ......+...++++....
T Consensus 16 ~PLVv~LHG~~---~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 16 VPLVVVLHGCG---QSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCEEEEeCCCC---CCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 49999999965 2322210112245789999999999975321 11111 112333445555555444
Q ss_pred cCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 69 STVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 69 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
.+|++||++.|+|+||.++..++..++ ..+.++...++..
T Consensus 93 --------~iD~~RVyv~G~S~Gg~ma~~la~~~p------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 --------NIDPSRVYVTGLSNGGMMANVLACAYP------DLFAAVAVVSGVP 132 (220)
T ss_pred --------ccCCCceeeEEECHHHHHHHHHHHhCC------ccceEEEeecccc
Confidence 589999999999999999999999854 4778877776653
No 108
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=2.2e-13 Score=103.27 Aligned_cols=228 Identities=12% Similarity=0.069 Sum_probs=78.7
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC----CCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR----LAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
+||||-|=+ -|-.+......+++.|. ..+|.++-+..+ +-+-.......+|+..+++||+.... . ..
T Consensus 35 ~llfIGGLt--DGl~tvpY~~~La~aL~-~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~-----g-~~ 105 (303)
T PF08538_consen 35 ALLFIGGLT--DGLLTVPYLPDLAEALE-ETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKG-----G-HF 105 (303)
T ss_dssp EEEEE--TT----TT-STCHHHHHHHHT--TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS----------
T ss_pred EEEEECCCC--CCCCCCchHHHHHHHhc-cCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhc-----c-cc
Confidence 688888722 12223332345555553 359999988654 33334455668899999999998731 0 02
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHh-----h
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTA-----F 153 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 153 (249)
+.++|+|+|||.|..-++.++.+..... ....+.|+|+.+|+.|.+............... ......+... .
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~--v~~A~~~i~~g~~~~~ 182 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSP-SRPPVDGAILQAPVSDREAILNFLGEREAYEEL--VALAKELIAEGKGDEI 182 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TTSTTTSHHH---HHHH--HHHHHHHHHCT-TT-G
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccc-cccceEEEEEeCCCCChhHhhhcccchHHHHHH--HHHHHHHHHcCCCCce
Confidence 4689999999999999999998764311 135899999999999876543322110000000 0000000000 0
Q ss_pred CCCCCCCCCCCCCCC---------CC---------------CccccccCCCCcEEEEecCCCcchhhH---HHHHHHHHH
Q 041117 154 LPEGTDRDYPAANTF---------GK---------------HAVDISRVDIPATIVIVGGFDPLKDWQ---KRHYQGLKR 206 (249)
Q Consensus 154 ~~~~~~~~~~~~~~~---------~~---------------~~~~~~~~~~pP~li~~g~~D~~~~~~---~~~~~~l~~ 206 (249)
++...........++ ++ ....+.... .|+|++.+++|..+|.. .++.++.++
T Consensus 183 lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~-~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~ 261 (303)
T PF08538_consen 183 LPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVS-KPLLVLYSGKDEYVPPWVDKEALLERWKA 261 (303)
T ss_dssp G----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG---S-EEEEEE--TT-----------------
T ss_pred eeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCC-CceEEEecCCCceeccccccccccccccc
Confidence 000000000000000 00 000111122 27999999999999753 455566655
Q ss_pred CCC----ceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHH
Q 041117 207 HGK----EAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIR 243 (249)
Q Consensus 207 ~~~----~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~ 243 (249)
+.. ....-++||+.|.......... +.++++|..||+
T Consensus 262 a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 262 ATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccCC
Confidence 432 2345699999997653322111 568888888874
No 109
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.39 E-value=3.3e-12 Score=98.29 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=72.6
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCc-------hhhHHHHHHHHHhhccCCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQ-------YDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~~~~~ 73 (249)
.|++|++||.+ ++....++..+...+..+.++.|+++|+++.....++.. .+++...++++.+..
T Consensus 36 ~p~vilIHG~~---~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~----- 107 (275)
T cd00707 36 RPTRFIIHGWT---SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT----- 107 (275)
T ss_pred CCcEEEEcCCC---CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc-----
Confidence 48999999943 333222234455556655589999999987533322221 234555666665543
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
+.+.++++|+|||+||++|..++.+++ .++++++++.|....
T Consensus 108 ---g~~~~~i~lIGhSlGa~vAg~~a~~~~------~~v~~iv~LDPa~p~ 149 (275)
T cd00707 108 ---GLSLENVHLIGHSLGAHVAGFAGKRLN------GKLGRITGLDPAGPL 149 (275)
T ss_pred ---CCChHHEEEEEecHHHHHHHHHHHHhc------CccceeEEecCCccc
Confidence 246789999999999999999998853 378999999876543
No 110
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.38 E-value=6.2e-12 Score=90.01 Aligned_cols=159 Identities=16% Similarity=0.211 Sum_probs=113.9
Q ss_pred hhHHHHHHHHhCCcEEEeecC-CC---CC------------CCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEE
Q 041117 22 YDDHCRRLAKEIPAVVISVNY-RL---AP------------ENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFV 85 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~-r~---~~------------~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l 85 (249)
-+..+..++.. ||.|++||+ +| ++ .+..+...+++...++||.... +..+|.+
T Consensus 56 ~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g----------~~kkIGv 124 (242)
T KOG3043|consen 56 TREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG----------DSKKIGV 124 (242)
T ss_pred HHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC----------CcceeeE
Confidence 46778888885 999999997 44 22 2345667899999999999654 5789999
Q ss_pred EecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCCCCCCC
Q 041117 86 AGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAA 165 (249)
Q Consensus 86 ~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (249)
+|+.+||.++..+....+ .+.+++.+.|.+.-.
T Consensus 125 ~GfCwGak~vv~~~~~~~-------~f~a~v~~hps~~d~---------------------------------------- 157 (242)
T KOG3043|consen 125 VGFCWGAKVVVTLSAKDP-------EFDAGVSFHPSFVDS---------------------------------------- 157 (242)
T ss_pred EEEeecceEEEEeeccch-------hheeeeEecCCcCCh----------------------------------------
Confidence 999999988777766532 577888877744210
Q ss_pred CCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCC-CceEEEEeCCCceeeee---cCCCCh-----hHH
Q 041117 166 NTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHG-KEAYLIEYPNAVHGFYI---FPELHE-----GSF 234 (249)
Q Consensus 166 ~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~H~~~~---~~~~~~-----~~~ 234 (249)
.+....+ .|++++.|+.|.++|.. .++-+++++.. ...++++|+|.+|+|.. ....|+ ++.
T Consensus 158 -------~D~~~vk-~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea 229 (242)
T KOG3043|consen 158 -------ADIANVK-APILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEA 229 (242)
T ss_pred -------hHHhcCC-CCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHH
Confidence 0111113 56999999999998743 44556666543 23579999999999984 222233 788
Q ss_pred HHHHHHHHHhhh
Q 041117 235 IDDVGNFIRDQS 246 (249)
Q Consensus 235 ~~~~~~fl~~~~ 246 (249)
.+.+++|++..+
T Consensus 230 ~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 230 YQRFISWFKHYL 241 (242)
T ss_pred HHHHHHHHHHhh
Confidence 889999998875
No 111
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=4.5e-12 Score=93.22 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=120.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC----------C-C-----------------CCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE----------N-R-----------------YPS 52 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~----------~-~-----------------~~~ 52 (249)
+|.||..||-+ |+... |.+++. ++. .||.|+++|.||-+. . . +..
T Consensus 83 ~P~vV~fhGY~---g~~g~--~~~~l~-wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 83 LPAVVQFHGYG---GRGGE--WHDMLH-WAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred cceEEEEeecc---CCCCC--cccccc-ccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 58999999922 22222 333333 333 399999999987321 1 1 112
Q ss_pred chhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc
Q 041117 53 QYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE 132 (249)
Q Consensus 53 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 132 (249)
.+.|+..+++.+..... ++.++|.+.|.|.||.+++..+.- .+++++++...|++.-........
T Consensus 156 v~~D~~~ave~~~sl~~--------vde~Ri~v~G~SqGGglalaaaal-------~~rik~~~~~~Pfl~df~r~i~~~ 220 (321)
T COG3458 156 VFLDAVRAVEILASLDE--------VDEERIGVTGGSQGGGLALAAAAL-------DPRIKAVVADYPFLSDFPRAIELA 220 (321)
T ss_pred ehHHHHHHHHHHhccCc--------cchhheEEeccccCchhhhhhhhc-------Chhhhcccccccccccchhheeec
Confidence 25677777777776654 889999999999999999998874 358999999999886543322221
Q ss_pred cccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceE
Q 041117 133 DLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAY 212 (249)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~ 212 (249)
.. . +...+..+++...+.+ .......+.+ ...++.....-|+|+..|-.|++++++-.++-.-+-. .+.+
T Consensus 221 -~~--~---~ydei~~y~k~h~~~e-~~v~~TL~yf--D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~ 290 (321)
T COG3458 221 -TE--G---PYDEIQTYFKRHDPKE-AEVFETLSYF--DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-TSKT 290 (321)
T ss_pred -cc--C---cHHHHHHHHHhcCchH-HHHHHHHhhh--hhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc-CCce
Confidence 11 1 1122222222222110 0000000101 1112222233469999999999998765544322222 3667
Q ss_pred EEEeCCCceeeeecCCCChhHHHHHHHHHHHhhh
Q 041117 213 LIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQS 246 (249)
Q Consensus 213 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~ 246 (249)
+.+|+.-+|... + .-..+++..|++...
T Consensus 291 i~iy~~~aHe~~--p----~~~~~~~~~~l~~l~ 318 (321)
T COG3458 291 IEIYPYFAHEGG--P----GFQSRQQVHFLKILF 318 (321)
T ss_pred EEEeeccccccC--c----chhHHHHHHHHHhhc
Confidence 888888789422 1 445556788887653
No 112
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.36 E-value=3.8e-11 Score=85.46 Aligned_cols=150 Identities=22% Similarity=0.225 Sum_probs=83.2
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCce
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRC 83 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i 83 (249)
|+++||-+ ++.... |..+.++-.+. .+.|-.++. .-.+..+.+..|.+... .-.+++
T Consensus 1 v~IvhG~~---~s~~~H-W~~wl~~~l~~-~~~V~~~~~----------~~P~~~~W~~~l~~~i~--------~~~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYG---GSPPDH-WQPWLERQLEN-SVRVEQPDW----------DNPDLDEWVQALDQAID--------AIDEPT 57 (171)
T ss_dssp EEEE--TT---SSTTTS-THHHHHHHHTT-SEEEEEC------------TS--HHHHHHHHHHCCH--------C-TTTE
T ss_pred CEEeCCCC---CCCccH-HHHHHHHhCCC-CeEEecccc----------CCCCHHHHHHHHHHHHh--------hcCCCe
Confidence 68999933 566655 55555444443 366666654 11244455555555543 123569
Q ss_pred EEEecchhHHHHHHHHHHhccccccccccccccccccCCCC-CCCCcccccccCCCCccchhhHHHHHHhhCCCCCCCCC
Q 041117 84 FVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG-EERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDRDY 162 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (249)
+|+|||.|+..++.++... ...+++|+++++|+-.. ........
T Consensus 58 ilVaHSLGc~~~l~~l~~~-----~~~~v~g~lLVAp~~~~~~~~~~~~~------------------------------ 102 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQ-----SQKKVAGALLVAPFDPDDPEPFPPEL------------------------------ 102 (171)
T ss_dssp EEEEETHHHHHHHHHHHHT-----CCSSEEEEEEES--SCGCHHCCTCGG------------------------------
T ss_pred EEEEeCHHHHHHHHHHhhc-----ccccccEEEEEcCCCcccccchhhhc------------------------------
Confidence 9999999999999999522 44589999999997532 00000000
Q ss_pred CCCCCCCCCccccccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCcee
Q 041117 163 PAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHG 222 (249)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~ 222 (249)
..+.+. ......+| .+++.+++|++++. +.++++++ +.+++.++++||.
T Consensus 103 ---~~f~~~--p~~~l~~~-~~viaS~nDp~vp~~~a~~~A~~l-----~a~~~~~~~~GHf 153 (171)
T PF06821_consen 103 ---DGFTPL--PRDPLPFP-SIVIASDNDPYVPFERAQRLAQRL-----GAELIILGGGGHF 153 (171)
T ss_dssp ---CCCTTS--HCCHHHCC-EEEEEETTBSSS-HHHHHHHHHHH-----T-EEEEETS-TTS
T ss_pred ---cccccC--cccccCCC-eEEEEcCCCCccCHHHHHHHHHHc-----CCCeEECCCCCCc
Confidence 000000 01111333 69999999999973 35555555 4689999999994
No 113
>COG0627 Predicted esterase [General function prediction only]
Probab=99.34 E-value=9.2e-12 Score=96.45 Aligned_cols=153 Identities=12% Similarity=0.073 Sum_probs=96.3
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
++..|+||||||+-|+.+|++++ .+++.+..++|+++........... ...........++..........
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~p------d~f~~~sS~Sg~~~~s~~~~~~~~~---~~~~g~~~~~~~~G~~~~~~w~~ 222 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKHP------DRFKSASSFSGILSPSSPWGPTLAM---GDPWGGKAFNAMLGPDSDPAWQE 222 (316)
T ss_pred CCceeEEEeccchhhhhhhhhCc------chhceeccccccccccccccccccc---cccccCccHHHhcCCCccccccc
Confidence 38999999999999999999853 4899999999999876443332000 00000001111111111000011
Q ss_pred CCCCCCCCC---C---CccccccCCCCcEEEEecCCCcchh-h---HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCC
Q 041117 161 DYPAANTFG---K---HAVDISRVDIPATIVIVGGFDPLKD-W---QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELH 230 (249)
Q Consensus 161 ~~~~~~~~~---~---~~~~~~~~~~pP~li~~g~~D~~~~-~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 230 (249)
.+....... . ....... ..+++++-+|..|.+.. . ...+.+++.+.|.+.+++..++..|.|..+
T Consensus 223 ~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w---- 297 (316)
T COG0627 223 NDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFW---- 297 (316)
T ss_pred cCchhHHHHhhhcccccceeccc-CCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHH----
Confidence 111110000 0 0000011 44668899999998775 3 588999999999999999999999998876
Q ss_pred hhHHHHHHHHHHHhhhcC
Q 041117 231 EGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 231 ~~~~~~~~~~fl~~~~~~ 248 (249)
...++++..|+.+.++.
T Consensus 298 -~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 298 -ASQLADHLPWLAGALGL 314 (316)
T ss_pred -HHHHHHHHHHHHHHhcc
Confidence 78999999999988764
No 114
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.32 E-value=4.3e-11 Score=96.51 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=70.7
Q ss_pred CCEEEEEecCccccCCCCccchh-HHHHHHHHh-CCcEEEeecCCCCCCCCCCCc-------hhhHHHHHHHHHhhccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD-DHCRRLAKE-IPAVVISVNYRLAPENRYPSQ-------YDDGIDVLKFIDTKISTV 71 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~-~~~~~l~~~-~g~~v~~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~~~ 71 (249)
.|++|++||.+ ++.....|. .+...+..+ ..+.|+++|+++.....++.. .+++.+.+++|.+..
T Consensus 41 ~ptvIlIHG~~---~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~--- 114 (442)
T TIGR03230 41 TKTFIVIHGWT---VTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF--- 114 (442)
T ss_pred CCeEEEECCCC---cCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh---
Confidence 48999999944 222222243 344555432 269999999998665544432 134455566655443
Q ss_pred CCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 72 EDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 72 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+++.++++|+|||+||++|..++.+. +.++.+++++.|.-
T Consensus 115 -----gl~l~~VhLIGHSLGAhIAg~ag~~~------p~rV~rItgLDPAg 154 (442)
T TIGR03230 115 -----NYPWDNVHLLGYSLGAHVAGIAGSLT------KHKVNRITGLDPAG 154 (442)
T ss_pred -----CCCCCcEEEEEECHHHHHHHHHHHhC------CcceeEEEEEcCCC
Confidence 25678999999999999999998763 44788999988764
No 115
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.31 E-value=6.1e-12 Score=93.64 Aligned_cols=118 Identities=14% Similarity=0.073 Sum_probs=77.2
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhC
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFL 154 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (249)
.+.+|.+||++.|.|+||..++.++.++++ .+.+.+++++--+.
T Consensus 263 ~ynID~sRIYviGlSrG~~gt~al~~kfPd------fFAaa~~iaG~~d~------------------------------ 306 (387)
T COG4099 263 TYNIDRSRIYVIGLSRGGFGTWALAEKFPD------FFAAAVPIAGGGDR------------------------------ 306 (387)
T ss_pred ccCcccceEEEEeecCcchhhHHHHHhCch------hhheeeeecCCCch------------------------------
Confidence 456899999999999999999999999544 68888877652110
Q ss_pred CCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCC---CceeeeecCCC
Q 041117 155 PEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPN---AVHGFYIFPEL 229 (249)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~---~~H~~~~~~~~ 229 (249)
.. ..+..+..|+.+.|+++|..+| .++..+++++..+.++++..+.. ..|++.....|
T Consensus 307 -------v~----------lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w 369 (387)
T COG4099 307 -------VY----------LVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVW 369 (387)
T ss_pred -------hh----------hhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcc
Confidence 00 0111133469999999998886 45778888888877777777662 23333323222
Q ss_pred ChhHHHHHHHHHHHhh
Q 041117 230 HEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 230 ~~~~~~~~~~~fl~~~ 245 (249)
...--..++.+||-++
T Consensus 370 ~atyn~~eaieWLl~Q 385 (387)
T COG4099 370 WATYNDAEAIEWLLKQ 385 (387)
T ss_pred eeecCCHHHHHHHHhc
Confidence 1122234566777654
No 116
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.30 E-value=2e-11 Score=100.29 Aligned_cols=192 Identities=19% Similarity=0.169 Sum_probs=127.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----------CCCchhhHHHHHHHHHhhccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----------YPSQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~ 70 (249)
|++|+-.| ..|......+....-.|.+| |++.....-||.++.. ...++.|..++.++|.+..-
T Consensus 449 p~lLygYG---aYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~- 523 (682)
T COG1770 449 PLLLYGYG---AYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGY- 523 (682)
T ss_pred cEEEEEec---cccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCc-
Confidence 78888887 34665555566556667776 9998888888865432 45678999999999988764
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHH
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMW 150 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (249)
..++++++.|.|+||+++...+-. .|..++++|+..|++|.-+.+.... .|+-..+...
T Consensus 524 -------~~~~~i~a~GGSAGGmLmGav~N~------~P~lf~~iiA~VPFVDvltTMlD~s-----lPLT~~E~~E--- 582 (682)
T COG1770 524 -------TSPDRIVAIGGSAGGMLMGAVANM------APDLFAGIIAQVPFVDVLTTMLDPS-----LPLTVTEWDE--- 582 (682)
T ss_pred -------CCccceEEeccCchhHHHHHHHhh------ChhhhhheeecCCccchhhhhcCCC-----CCCCccchhh---
Confidence 567899999999999999988877 5568999999999997643321111 1111111000
Q ss_pred HhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCC---ceEEEEeCCCcee
Q 041117 151 TAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGK---EAYLIEYPNAVHG 222 (249)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~---~~~~~~~~~~~H~ 222 (249)
+-++.....+..+..++|.. ++.....||+|++.|..|+-|. +..+++.+|+..+. ++-+++-..+||+
T Consensus 583 --WGNP~d~e~y~yikSYSPYd-NV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 583 --WGNPLDPEYYDYIKSYSPYD-NVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred --hCCcCCHHHHHHHhhcCchh-ccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCC
Confidence 00001111122223334333 4444578999999999998774 45777888876543 4556666788996
No 117
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.28 E-value=5.8e-13 Score=100.03 Aligned_cols=71 Identities=23% Similarity=0.181 Sum_probs=58.2
Q ss_pred cEEEeecCCCCCCCCC-------CCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccc
Q 041117 35 AVVISVNYRLAPENRY-------PSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKF 107 (249)
Q Consensus 35 ~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 107 (249)
|.|+++|.||.+.... ....+|..+.+..+.+.. +.++++++||||||.+++.++.+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~vG~S~Gg~~~~~~a~~~p---- 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL----------GIKKINLVGHSMGGMLALEYAAQYP---- 66 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH----------TTSSEEEEEETHHHHHHHHHHHHSG----
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh----------CCCCeEEEEECCChHHHHHHHHHCc----
Confidence 5799999999776552 123688888888888876 4567999999999999999999954
Q ss_pred cccccccccccccC
Q 041117 108 SKLKLIGVIPIQPF 121 (249)
Q Consensus 108 ~~~~~~~~i~~~p~ 121 (249)
.++++++++++.
T Consensus 67 --~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 --ERVKKLVLISPP 78 (230)
T ss_dssp --GGEEEEEEESES
T ss_pred --hhhcCcEEEeee
Confidence 489999999885
No 118
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.25 E-value=2.2e-11 Score=94.93 Aligned_cols=80 Identities=23% Similarity=0.118 Sum_probs=52.5
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCCCCCCC-----------c----------------hhhHHHHHHHHHhhccCCCCCCC
Q 041117 24 DHCRRLAKEIPAVVISVNYRLAPENRYPS-----------Q----------------YDDGIDVLKFIDTKISTVEDFPA 76 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----------~----------------~~d~~~~~~~l~~~~~~~~~~~~ 76 (249)
.+...|+++ ||+|+++|-.+.++..-.. . .-|...+++||.....
T Consensus 151 ~~g~~LAk~-GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe------- 222 (390)
T PF12715_consen 151 DYGDQLAKR-GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE------- 222 (390)
T ss_dssp -HHHHHHTT-TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT-------
T ss_pred cHHHHHHhC-CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc-------
Confidence 467888886 9999999987643321100 0 1234447778777665
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccc
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ 119 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 119 (249)
+++++|.++|+||||..++.+++.. .+|++.+..+
T Consensus 223 -VD~~RIG~~GfSmGg~~a~~LaALD-------dRIka~v~~~ 257 (390)
T PF12715_consen 223 -VDPDRIGCMGFSMGGYRAWWLAALD-------DRIKATVANG 257 (390)
T ss_dssp -EEEEEEEEEEEGGGHHHHHHHHHH--------TT--EEEEES
T ss_pred -cCccceEEEeecccHHHHHHHHHcc-------hhhHhHhhhh
Confidence 8999999999999999999999853 3787777653
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.24 E-value=6.6e-10 Score=86.11 Aligned_cols=212 Identities=14% Similarity=0.081 Sum_probs=115.7
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCCCCCCCCch---hhHHHHHHHHHhhccCCCCCCCccC-CCceEEEecchhHHHHHHH
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAPENRYPSQY---DDGIDVLKFIDTKISTVEDFPACAD-LKRCFVAGDSAGGNLAHNV 98 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~---~d~~~~~~~l~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~ 98 (249)
..++..+.++ ||+|+++||.|-.. .|.... ..+.++++..++... ..++. ..+++++|+|-||.-++..
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~-----~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPP-----KLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhccc-----ccCCCCCCCEEEEeeCccHHHHHHH
Confidence 4567777775 99999999987544 553333 444455555544432 12232 4689999999999988766
Q ss_pred HHHhccccccccc--cccccccccCCCCCCCCccccccc-------------CCCC--------ccchhhH---HHH---
Q 041117 99 AVRANECKFSKLK--LIGVIPIQPFFGGEERTQSEEDLN-------------DITP--------LVSLRRS---DWM--- 149 (249)
Q Consensus 99 a~~~~~~~~~~~~--~~~~i~~~p~~~~~~~~~~~~~~~-------------~~~~--------~~~~~~~---~~~--- 149 (249)
+...++.. +... +.|.+...|..+............ ...+ .+..... ...
T Consensus 89 A~l~~~YA-peL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~ 167 (290)
T PF03583_consen 89 AELAPSYA-PELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTR 167 (290)
T ss_pred HHHhHHhC-cccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhh
Confidence 54322221 2335 788888777665432211100000 0000 0000000 000
Q ss_pred -----HHhhCCCCC----CCCC-CCCCCCC-----C--Ccccc----ccCCCCcEEEEecCCCcchhh--HHHHHHHHHH
Q 041117 150 -----WTAFLPEGT----DRDY-PAANTFG-----K--HAVDI----SRVDIPATIVIVGGFDPLKDW--QKRHYQGLKR 206 (249)
Q Consensus 150 -----~~~~~~~~~----~~~~-~~~~~~~-----~--~~~~~----~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~ 206 (249)
...+..... .... ....... . ....+ ......|++|.||..|.++|. ...+++++.+
T Consensus 168 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 168 CLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred hHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHH
Confidence 000000000 0000 0000000 0 00011 101223899999999999974 5788888989
Q ss_pred CC-CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhcC
Q 041117 207 HG-KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 207 ~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
.| .+++++.+++.+|.-.. -......++||.++|+.
T Consensus 248 ~G~a~V~~~~~~~~~H~~~~------~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 248 AGGADVEYVRYPGGGHLGAA------FASAPDALAWLDDRFAG 284 (290)
T ss_pred cCCCCEEEEecCCCChhhhh------hcCcHHHHHHHHHHHCC
Confidence 99 79999999999996443 24457888999998873
No 120
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.24 E-value=2.1e-09 Score=81.74 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=62.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhC-CcEEEeecCCCCCCCC-CCCchhhHHHHHHHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEI-PAVVISVNYRLAPENR-YPSQYDDGIDVLKFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 79 (249)
|.++++||++. +... |......+.... .|.++.+|.|+.+... .........+.+..+.+.. +
T Consensus 22 ~~i~~~hg~~~---~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~----------~ 86 (282)
T COG0596 22 PPLVLLHGFPG---SSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDAL----------G 86 (282)
T ss_pred CeEEEeCCCCC---chhh--hHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHh----------C
Confidence 57999999652 2222 333222333321 1899999999766554 0112222234444444443 3
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..+++++|||+||.+++.++.+.+ ..+++++++++..
T Consensus 87 ~~~~~l~G~S~Gg~~~~~~~~~~p------~~~~~~v~~~~~~ 123 (282)
T COG0596 87 LEKVVLVGHSMGGAVALALALRHP------DRVRGLVLIGPAP 123 (282)
T ss_pred CCceEEEEecccHHHHHHHHHhcc------hhhheeeEecCCC
Confidence 455999999999999999999854 3788888887654
No 121
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1.5e-09 Score=81.32 Aligned_cols=104 Identities=21% Similarity=0.250 Sum_probs=66.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec-CCCC------CCCC----CCCchhhH---HHHHHHHHhh
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN-YRLA------PENR----YPSQYDDG---IDVLKFIDTK 67 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d-~r~~------~~~~----~~~~~~d~---~~~~~~l~~~ 67 (249)
|+||++||++ ++.....-..-..+++++.|+.|+-|| |... .... .....+|+ ++.+..|..
T Consensus 62 pLvv~LHG~~---~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~- 137 (312)
T COG3509 62 PLVVVLHGSG---GSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVN- 137 (312)
T ss_pred CEEEEEecCC---CChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHH-
Confidence 7999999955 333321112234788999999999995 3221 1110 11223333 333444433
Q ss_pred ccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 68 ISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 68 ~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
++++++++|++.|.|.||.++..++..++ ..+.++..++...
T Consensus 138 -------~~gidp~RVyvtGlS~GG~Ma~~lac~~p------~~faa~A~VAg~~ 179 (312)
T COG3509 138 -------EYGIDPARVYVTGLSNGGRMANRLACEYP------DIFAAIAPVAGLL 179 (312)
T ss_pred -------hcCcCcceEEEEeeCcHHHHHHHHHhcCc------ccccceeeeeccc
Confidence 45699999999999999999999999844 3566666555443
No 122
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.21 E-value=3.7e-12 Score=97.28 Aligned_cols=42 Identities=29% Similarity=0.248 Sum_probs=35.6
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
+..++.+|+|+||||..|+.++.++ |..+.+++++||.++..
T Consensus 112 ~~~~~~~i~G~S~GG~~Al~~~l~~------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 112 TDPDRRAIAGHSMGGYGALYLALRH------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp EEECCEEEEEETHHHHHHHHHHHHS------TTTESEEEEESEESETT
T ss_pred cccceeEEeccCCCcHHHHHHHHhC------ccccccccccCcccccc
Confidence 4445599999999999999999994 45899999999987665
No 123
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.18 E-value=3.7e-11 Score=101.76 Aligned_cols=111 Identities=26% Similarity=0.323 Sum_probs=80.4
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC---------CCCCCCchhhHHHHHHHHHhhccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP---------ENRYPSQYDDGIDVLKFIDTKISTV 71 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~---------~~~~~~~~~d~~~~~~~l~~~~~~~ 71 (249)
+||+||+||||+..|+...... .....+.....++|+.++||+.. .......+.|...+++|+.+...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~-~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~-- 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEI-ISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIP-- 188 (545)
T ss_pred CCEEEEEeCCceeeccccchhh-cCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHH--
Confidence 5999999999999888654211 12233333347999999999742 11234457899999999999986
Q ss_pred CCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccC
Q 041117 72 EDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPF 121 (249)
Q Consensus 72 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 121 (249)
..+.|+++|.|+|||+||..+..+......+ ..++.+|.+|+.
T Consensus 189 ---~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~----~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 189 ---SFGGDPKNVTLFGHSAGAASVSLLTLSPHSR----GLFHKAISMSGN 231 (545)
T ss_pred ---hcCCCCCeEEEEeechhHHHHHHHhcCHhhH----HHHHHHHhhccc
Confidence 6678999999999999999998888753322 246666666554
No 124
>PRK04940 hypothetical protein; Provisional
Probab=99.16 E-value=1.8e-09 Score=76.29 Aligned_cols=119 Identities=16% Similarity=0.189 Sum_probs=72.8
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
+++.|+|+|+||+.|..++.++ .++ .|+++|.+.............. . .. ........
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--------g~~-aVLiNPAv~P~~~L~~~ig~~~-~--y~-~~~~~h~~--------- 117 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--------GIR-QVIFNPNLFPEENMEGKIDRPE-E--YA-DIATKCVT--------- 117 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--------CCC-EEEECCCCChHHHHHHHhCCCc-c--hh-hhhHHHHH---------
Confidence 5799999999999999999986 343 5567788765321111110000 0 00 00011000
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCce-EEEEeCCCceeeeecCCCChhHHHHHHH
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEA-YLIEYPNAVHGFYIFPELHEGSFIDDVG 239 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 239 (249)
.++....-..+++..+.|.+.+ -++..+++. .+ +..+.+|++|.|..+ ++.+..|.
T Consensus 118 -------------eL~~~~p~r~~vllq~gDEvLD-yr~a~~~y~----~~y~~~v~~GGdH~f~~f-----e~~l~~I~ 174 (180)
T PRK04940 118 -------------NFREKNRDRCLVILSRNDEVLD-SQRTAEELH----PYYEIVWDEEQTHKFKNI-----SPHLQRIK 174 (180)
T ss_pred -------------HhhhcCcccEEEEEeCCCcccC-HHHHHHHhc----cCceEEEECCCCCCCCCH-----HHHHHHHH
Confidence 1110011237899999999887 344444554 33 588999999987765 78999999
Q ss_pred HHHHh
Q 041117 240 NFIRD 244 (249)
Q Consensus 240 ~fl~~ 244 (249)
+|+..
T Consensus 175 ~F~~~ 179 (180)
T PRK04940 175 AFKTL 179 (180)
T ss_pred HHHhc
Confidence 99853
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.16 E-value=3e-10 Score=80.37 Aligned_cols=182 Identities=19% Similarity=0.284 Sum_probs=109.3
Q ss_pred EEEEEec-CccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC--CCCCCCCchhhHHHHHHHHHhhccCCCCCCCccC
Q 041117 3 VIVYFHG-GGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA--PENRYPSQYDDGIDVLKFIDTKISTVEDFPACAD 79 (249)
Q Consensus 3 ~vv~~HG-gg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 79 (249)
++|++-| |||. .. -..+++.|+++ |+.|+.+|-... .+.+......|+.+.++...+.. +
T Consensus 4 ~~v~~SGDgGw~----~~--d~~~a~~l~~~-G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w----------~ 66 (192)
T PF06057_consen 4 LAVFFSGDGGWR----DL--DKQIAEALAKQ-GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARW----------G 66 (192)
T ss_pred EEEEEeCCCCch----hh--hHHHHHHHHHC-CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHh----------C
Confidence 5788888 8873 11 35778889886 999999994321 12222344567777776666553 6
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTD 159 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (249)
.++++|+|.|+|+-+.-....+++.. ...+++.+++++|........... .++.....
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~~--~r~~v~~v~Ll~p~~~~dFeihv~--------------------~wlg~~~~ 124 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPAA--LRARVAQVVLLSPSTTADFEIHVS--------------------GWLGMGGD 124 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCHH--HHhheeEEEEeccCCcceEEEEhh--------------------hhcCCCCC
Confidence 78999999999998888888776543 235789999988754322111000 00100000
Q ss_pred CC-CCCCCCCCCCccccccCCCCcEEEEecCCCc--chhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHH
Q 041117 160 RD-YPAANTFGKHAVDISRVDIPATIVIVGGFDP--LKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFID 236 (249)
Q Consensus 160 ~~-~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 236 (249)
.. ... ...+.+....|++.++|++|. .+| .+++ .+++.+..||..| |.- ++ +.+.+
T Consensus 125 ~~~~~~-------~pei~~l~~~~v~CiyG~~E~d~~cp-------~l~~--~~~~~i~lpGgHH-fd~--dy--~~La~ 183 (192)
T PF06057_consen 125 DAAYPV-------IPEIAKLPPAPVQCIYGEDEDDSLCP-------SLRQ--PGVEVIALPGGHH-FDG--DY--DALAK 183 (192)
T ss_pred cccCCc-------hHHHHhCCCCeEEEEEcCCCCCCcCc-------cccC--CCcEEEEcCCCcC-CCC--CH--HHHHH
Confidence 00 001 112222234579999999875 333 2332 3688999998555 332 22 66777
Q ss_pred HHHHHHHh
Q 041117 237 DVGNFIRD 244 (249)
Q Consensus 237 ~~~~fl~~ 244 (249)
.+++-++.
T Consensus 184 ~Il~~l~~ 191 (192)
T PF06057_consen 184 RILDALKA 191 (192)
T ss_pred HHHHHHhc
Confidence 77766654
No 126
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.14 E-value=1e-09 Score=82.58 Aligned_cols=187 Identities=19% Similarity=0.222 Sum_probs=114.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC---------CCC---C-------------CC---
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP---------ENR---Y-------------PS--- 52 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~---------~~~---~-------------~~--- 52 (249)
||+|||-||=| |+++. |..+...||++ ||+|.++++|-.. .+. . ..
T Consensus 118 ~PvvvFSHGLg---gsRt~--YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 118 YPVVVFSHGLG---GSRTL--YSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred ccEEEEecccc---cchhh--HHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 79999999933 45666 89999999996 9999999988421 100 0 00
Q ss_pred --------chhhHHHHHHHHHhhcc--C-----------CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccc
Q 041117 53 --------QYDDGIDVLKFIDTKIS--T-----------VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLK 111 (249)
Q Consensus 53 --------~~~d~~~~~~~l~~~~~--~-----------~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~ 111 (249)
-.+++..+++-|.+.-. . +..++-.++..+++++|||.||..++...... ..
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-------t~ 264 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-------TD 264 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-------cc
Confidence 13345555554443210 0 00123345677899999999998887776642 26
Q ss_pred cccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCC
Q 041117 112 LIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFD 191 (249)
Q Consensus 112 ~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D 191 (249)
+++.|++..|+-+-.. ......+ -|++++. .+|
T Consensus 265 FrcaI~lD~WM~Pl~~---------------------------------------------~~~~~ar-qP~~fin-v~~ 297 (399)
T KOG3847|consen 265 FRCAIALDAWMFPLDQ---------------------------------------------LQYSQAR-QPTLFIN-VED 297 (399)
T ss_pred eeeeeeeeeeecccch---------------------------------------------hhhhhcc-CCeEEEE-ccc
Confidence 8888887555421100 0011112 2477777 445
Q ss_pred cchhhHHHHHHHHHHCCCceEEEEeCCCceeee-ec------------------CCCCh-hHHHHHHHHHHHhhhc
Q 041117 192 PLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFY-IF------------------PELHE-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~~------------------~~~~~-~~~~~~~~~fl~~~~~ 247 (249)
.-.+++...-+++...+..-.+..+.|+-|.-. .+ .++.- +..++..++||+++++
T Consensus 298 fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d 373 (399)
T KOG3847|consen 298 FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLD 373 (399)
T ss_pred ccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhh
Confidence 545556666666666665667888889888522 11 11111 6677888899998865
No 127
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.4e-09 Score=89.13 Aligned_cols=217 Identities=16% Similarity=0.109 Sum_probs=132.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC-----------CCCchhhHHHHHHHHHhhcc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR-----------YPSQYDDGIDVLKFIDTKIS 69 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~ 69 (249)
.|.+|+.|||--+ .-..+|..--.-|.+ .|++..-.|-||.++.. ....+.|...+.++|.+..-
T Consensus 470 ~P~LLygYGay~i---sl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 470 KPLLLYGYGAYGI---SLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred CceEEEEecccce---eeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 3888888885432 222234433333455 49998889999876543 34568999999999998865
Q ss_pred CCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHH
Q 041117 70 TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWM 149 (249)
Q Consensus 70 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (249)
..++++.+.|.|+||.++..++-. .|..++++|+-.|++|.-.... .++++....+
T Consensus 546 --------t~~~kL~i~G~SaGGlLvga~iN~------rPdLF~avia~VpfmDvL~t~~--------~tilplt~sd-- 601 (712)
T KOG2237|consen 546 --------TQPSKLAIEGGSAGGLLVGACINQ------RPDLFGAVIAKVPFMDVLNTHK--------DTILPLTTSD-- 601 (712)
T ss_pred --------CCccceeEecccCccchhHHHhcc------CchHhhhhhhcCcceehhhhhc--------cCccccchhh--
Confidence 578999999999999999888876 4557999999999987633211 1111100000
Q ss_pred HHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHC-------CCceEEEEeCCCc
Q 041117 150 WTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRH-------GKEAYLIEYPNAV 220 (249)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~-------~~~~~~~~~~~~~ 220 (249)
+...-.++...+...+.++++...-......|-+||..+.+|.-+. ++.++..+++.+ ..++-+.+..++|
T Consensus 602 ~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~ag 681 (712)
T KOG2237|consen 602 YEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAG 681 (712)
T ss_pred hcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCc
Confidence 0001111111122223333332211222246889999999986553 467777777743 1357889999999
Q ss_pred eeeeecCCCCh-hHHHHHHHHHHHhhhc
Q 041117 221 HGFYIFPELHE-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 221 H~~~~~~~~~~-~~~~~~~~~fl~~~~~ 247 (249)
|+.- .+.-. -+-.....+||.+.++
T Consensus 682 H~~~--~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 682 HGAE--KPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred cccC--CchHHHHHHHHHHHHHHHHHhc
Confidence 9532 11111 3334455677777654
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.12 E-value=5.5e-10 Score=86.26 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=63.2
Q ss_pred HHHhCCcEEEeecCCCCCCCC------CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 29 LAKEIPAVVISVNYRLAPENR------YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 29 l~~~~g~~v~~~d~r~~~~~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
++++ ||+|+..|.|+...+. .+...+|..++++|+.++. ....+|.++|.|.+|..++.+|..
T Consensus 53 ~~~~-GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qp---------ws~G~VGm~G~SY~G~~q~~~A~~- 121 (272)
T PF02129_consen 53 FAER-GYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQP---------WSNGKVGMYGISYGGFTQWAAAAR- 121 (272)
T ss_dssp HHHT-T-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCT---------TEEEEEEEEEETHHHHHHHHHHTT-
T ss_pred HHhC-CCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCC---------CCCCeEEeeccCHHHHHHHHHHhc-
Confidence 6775 9999999999865432 3345789999999998875 566799999999999999999986
Q ss_pred ccccccccccccccccccCCCCCC
Q 041117 103 NECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 103 ~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
.++.+++++..++..+.-.
T Consensus 122 -----~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 122 -----RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -----T-TTEEEEEEESE-SBTCC
T ss_pred -----CCCCceEEEecccCCcccc
Confidence 5568999998888776554
No 129
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.06 E-value=1.3e-08 Score=84.11 Aligned_cols=91 Identities=9% Similarity=0.071 Sum_probs=62.4
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhh----HHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHH
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDD----GIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNV 98 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d----~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~ 98 (249)
+.+++.+.++ |+.|+++|++........-.++| +.++++.+.+.- +.+++.++|+|+||.+++.+
T Consensus 237 ~SlVr~lv~q-G~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~t----------G~~~vnl~GyC~GGtl~a~~ 305 (560)
T TIGR01839 237 KSFVQYCLKN-QLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAIT----------GSRDLNLLGACAGGLTCAAL 305 (560)
T ss_pred chHHHHHHHc-CCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhc----------CCCCeeEEEECcchHHHHHH
Confidence 6789999986 99999999987443333333444 444555554443 56889999999999999973
Q ss_pred HHHhccccccc-cccccccccccCCCCCC
Q 041117 99 AVRANECKFSK-LKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 99 a~~~~~~~~~~-~~~~~~i~~~p~~~~~~ 126 (249)
+..+... .+ .+|++++++...+|...
T Consensus 306 ~a~~aA~--~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 306 VGHLQAL--GQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHHhc--CCCCceeeEEeeecccccCC
Confidence 2222211 23 37999998888887654
No 130
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.00 E-value=2.5e-09 Score=80.62 Aligned_cols=178 Identities=17% Similarity=0.216 Sum_probs=105.3
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhC---CcEEEeecCCCCCC-----CCCCCchhhHH-HHHHHHHhhccCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEI---PAVVISVNYRLAPE-----NRYPSQYDDGI-DVLKFIDTKISTV 71 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~---g~~v~~~d~r~~~~-----~~~~~~~~d~~-~~~~~l~~~~~~~ 71 (249)
||+++++||--|.. +......+..+..+. ..+++.+||--..+ +......+.+. +.+-++.+..
T Consensus 98 ~pvl~~~DG~~~~~----~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y--- 170 (299)
T COG2382 98 YPVLYLQDGQDWFR----SGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERY--- 170 (299)
T ss_pred ccEEEEeccHHHHh----cCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccC---
Confidence 79999999944321 111345566666642 35677777643211 11111122222 2234444433
Q ss_pred CCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHH
Q 041117 72 EDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWT 151 (249)
Q Consensus 72 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (249)
...-..+.-+|+|.|+||.+++..+.+++ ..+..++..||.++........... ...
T Consensus 171 ---p~~~~a~~r~L~G~SlGG~vsL~agl~~P------e~FG~V~s~Sps~~~~~~~~~~~~~-----------~~~--- 227 (299)
T COG2382 171 ---PTSADADGRVLAGDSLGGLVSLYAGLRHP------ERFGHVLSQSGSFWWTPLDTQPQGE-----------VAE--- 227 (299)
T ss_pred ---cccccCCCcEEeccccccHHHHHHHhcCc------hhhceeeccCCccccCccccccccc-----------hhh---
Confidence 22234567899999999999999999954 4899999999988654332110000 000
Q ss_pred hhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeec
Q 041117 152 AFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIF 226 (249)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 226 (249)
..+...... ....-++...++.+.+.++.+++++.+++.+.+..+.+|+| ||.+..+
T Consensus 228 ------------~l~~~~a~~-----~~~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~W 284 (299)
T COG2382 228 ------------SLKILHAIG-----TDERIVLTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAWW 284 (299)
T ss_pred ------------hhhhhhccC-----ccceEEeecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchhHh
Confidence 000000000 01111455555666777889999999999999999999999 9976655
No 131
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.99 E-value=6.4e-09 Score=79.69 Aligned_cols=117 Identities=18% Similarity=0.225 Sum_probs=78.4
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHh--CCcEEEeecCCCCCCCCCC----------CchhhHHHHHHHHHhhcc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKE--IPAVVISVNYRLAPENRYP----------SQYDDGIDVLKFIDTKIS 69 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~~----------~~~~d~~~~~~~l~~~~~ 69 (249)
+++++|.|.. .-...|.++++.|.++ ..+.|+++.+.|....... ..-+++...++.+.+...
T Consensus 3 ~li~~IPGNP-----Glv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 3 PLIVFIPGNP-----GLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred EEEEEECCCC-----ChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 5899999944 2244589999999987 4789999998875322111 112344444455544432
Q ss_pred CCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccc
Q 041117 70 TVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSE 131 (249)
Q Consensus 70 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 131 (249)
.......+++|+|||.|+++++.++.+..+ ...++++++++.|.+..-..+++.
T Consensus 78 -----~~~~~~~~liLiGHSIGayi~levl~r~~~---~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 78 -----QKNKPNVKLILIGHSIGAYIALEVLKRLPD---LKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred -----hhcCCCCcEEEEeCcHHHHHHHHHHHhccc---cCCceeEEEEeCCccccccCCchh
Confidence 000145789999999999999999998752 224889999999987655444443
No 132
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.98 E-value=2.7e-09 Score=79.18 Aligned_cols=117 Identities=17% Similarity=0.123 Sum_probs=64.5
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccc--cccccccccccccCCCCCCCCccc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKF--SKLKLIGVIPIQPFFGGEERTQSE 131 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~~~~~~~~ 131 (249)
..++.++++++.+... -+..=..|+|+|.||.+|..++........ ....++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~--------~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIE--------ENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---- 150 (212)
T ss_dssp G---HHHHHHHHHHHH--------HH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----
T ss_pred ccCHHHHHHHHHHHHH--------hcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----
Confidence 5667777888777664 122247899999999999999876543211 23467889988876532111
Q ss_pred ccccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchh--hHHHHHHHHHHCCC
Q 041117 132 EDLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKD--WQKRHYQGLKRHGK 209 (249)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~ 209 (249)
+. . .+ .... ...|+|-++|++|.+++ .+..+++.....
T Consensus 151 ---------------------~~--------~---~~-----~~~~-i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-- 190 (212)
T PF03959_consen 151 ---------------------YQ--------E---LY-----DEPK-ISIPTLHVIGENDPVVPPERSEALAEMFDPD-- 190 (212)
T ss_dssp ---------------------GT--------T---TT-------TT----EEEEEEETT-SSS-HHHHHHHHHHHHHH--
T ss_pred ---------------------hh--------h---hh-----cccc-CCCCeEEEEeCCCCCcchHHHHHHHHhccCC--
Confidence 00 0 00 0000 12469999999999997 567777777743
Q ss_pred ceEEEEeCCCceeee
Q 041117 210 EAYLIEYPNAVHGFY 224 (249)
Q Consensus 210 ~~~~~~~~~~~H~~~ 224 (249)
.+++..++ ||.+.
T Consensus 191 -~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 191 -ARVIEHDG-GHHVP 203 (212)
T ss_dssp -EEEEEESS-SSS--
T ss_pred -cEEEEECC-CCcCc
Confidence 77888876 88544
No 133
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.98 E-value=9.4e-09 Score=77.57 Aligned_cols=201 Identities=19% Similarity=0.133 Sum_probs=103.3
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcE----EEeecCCC------C--CCCC-------CC--------Cchh
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAV----VISVNYRL------A--PENR-------YP--------SQYD 55 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~----v~~~d~r~------~--~~~~-------~~--------~~~~ 55 (249)
+.||+||.+ |+..+ +..++.++..+.|.. ++.++-.| . .... |+ .+..
T Consensus 13 PTifihG~~---gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 13 PTIFIHGYG---GTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp EEEEE--TT---GGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cEEEECCCC---CChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 579999944 34333 788899887223532 22222111 1 1100 11 1233
Q ss_pred hHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc---
Q 041117 56 DGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE--- 132 (249)
Q Consensus 56 d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~--- 132 (249)
-+..++.+|.+.. ..+++-++||||||..++.++..+.... ..+.+..+|.++.-++.........
T Consensus 88 wl~~vl~~L~~~Y----------~~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~~~~~~~~~~~ 156 (255)
T PF06028_consen 88 WLKKVLKYLKKKY----------HFKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGILGMNDDQNQN 156 (255)
T ss_dssp HHHHHHHHHHHCC------------SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTTTCCSC-TTTT
T ss_pred HHHHHHHHHHHhc----------CCCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCccccccccchhh
Confidence 3444555555543 5689999999999999999998875432 2347788888877666544322111
Q ss_pred cccCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecC------CCcchhhH--HHHHHHH
Q 041117 133 DLNDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGG------FDPLKDWQ--KRHYQGL 204 (249)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~------~D~~~~~~--~~~~~~l 204 (249)
......|-........+...+. ..+. .--.+|-|.|. .|..||.. ..+...+
T Consensus 157 ~~~~~gp~~~~~~y~~l~~~~~------------------~~~p--~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~ 216 (255)
T PF06028_consen 157 DLNKNGPKSMTPMYQDLLKNRR------------------KNFP--KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLL 216 (255)
T ss_dssp -CSTT-BSS--HHHHHHHHTHG------------------GGST--TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHC
T ss_pred hhcccCCcccCHHHHHHHHHHH------------------hhCC--CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHh
Confidence 1111011111112222221100 0000 11249999998 67888742 3333344
Q ss_pred HHCCCceEEEEeCC--CceeeeecCCCChhHHHHHHHHHHH
Q 041117 205 KRHGKEAYLIEYPN--AVHGFYIFPELHEGSFIDDVGNFIR 243 (249)
Q Consensus 205 ~~~~~~~~~~~~~~--~~H~~~~~~~~~~~~~~~~~~~fl~ 243 (249)
+......+..++.| +.|.-.-.+ .++.+.+.+||=
T Consensus 217 ~~~~~~Y~e~~v~G~~a~HS~LheN----~~V~~~I~~FLw 253 (255)
T PF06028_consen 217 KNRAKSYQEKTVTGKDAQHSQLHEN----PQVDKLIIQFLW 253 (255)
T ss_dssp TTTSSEEEEEEEESGGGSCCGGGCC----HHHHHHHHHHHC
T ss_pred hcccCceEEEEEECCCCccccCCCC----HHHHHHHHHHhc
Confidence 44445677777765 578644332 899999999984
No 134
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.96 E-value=5.6e-08 Score=75.39 Aligned_cols=87 Identities=18% Similarity=0.151 Sum_probs=58.9
Q ss_pred CCEEEEEecCccccCCCCccchhHH-HHHHHHhCCcEEEeecCCCCCCCC------------------CCCchhhHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDH-CRRLAKEIPAVVISVNYRLAPENR------------------YPSQYDDGIDVL 61 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~-~~~l~~~~g~~v~~~d~r~~~~~~------------------~~~~~~d~~~~~ 61 (249)
+|++|.+.|.|- .....-..+ +..|.++ |+..+.+..+..+... ....+.++...+
T Consensus 92 rp~~IhLagTGD----h~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 92 RPVCIHLAGTGD----HGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred CceEEEecCCCc----cchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 488999999652 111101233 7888887 9998888754322111 012356777788
Q ss_pred HHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhc
Q 041117 62 KFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 62 ~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
.|+.+.. ..++.|.|.||||++|.+.+...+
T Consensus 167 ~Wl~~~G-----------~~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 167 HWLEREG-----------YGPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred HHHHhcC-----------CCceEEEEechhHhhHHhhhhcCC
Confidence 8887763 369999999999999999998743
No 135
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.94 E-value=5.3e-09 Score=78.71 Aligned_cols=101 Identities=21% Similarity=0.209 Sum_probs=70.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC-CCCCCCchhhHHHH-HHHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP-ENRYPSQYDDGIDV-LKFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~~~~~d~~~~-~~~l~~~~~~~~~~~~~~~ 79 (249)
+.|+++|++| |+.. .|.++++.+..+ .+.|+.+++++.. .......++++.+. ++.+.+.. +
T Consensus 1 ~~lf~~p~~g---G~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~----------~ 64 (229)
T PF00975_consen 1 RPLFCFPPAG---GSAS--SYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ----------P 64 (229)
T ss_dssp -EEEEESSTT---CSGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT----------S
T ss_pred CeEEEEcCCc---cCHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC----------C
Confidence 4688999966 4433 389999999775 5889999988754 22333445554444 34444433 2
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPF 121 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 121 (249)
..++.|+|||+||.+|..+|.+..+.+. .+..++++.+.
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~~Le~~G~---~v~~l~liD~~ 103 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMARQLEEAGE---EVSRLILIDSP 103 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCS
T ss_pred CCCeeehccCccHHHHHHHHHHHHHhhh---ccCceEEecCC
Confidence 3499999999999999999999877554 78888888743
No 136
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.91 E-value=8.9e-09 Score=88.49 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCC--------------------------Cch
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYP--------------------------SQY 54 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------------------------~~~ 54 (249)
+|+||++||-+ +.. ..|..+++.|+++ ||+|+++|+|++++..+. +.+
T Consensus 449 ~P~VVllHG~~---g~~--~~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 449 WPVVIYQHGIT---GAK--ENALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CcEEEEeCCCC---CCH--HHHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 47999999933 232 3378889999875 999999999987665332 122
Q ss_pred hhHHHHHHHHHhhccCC----CC--CCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 55 DDGIDVLKFIDTKISTV----ED--FPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~----~~--~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
++....+..++.....+ .. ..-..+..+++++||||||.++..++...
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 22222222222222100 00 00014567999999999999999999753
No 137
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=98.89 E-value=1.7e-09 Score=86.15 Aligned_cols=109 Identities=24% Similarity=0.277 Sum_probs=81.2
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCC----------CCCCCCCchhhHHHHHHHHHhhccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLA----------PENRYPSQYDDGIDVLKFIDTKISTVE 72 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----------~~~~~~~~~~d~~~~~~~l~~~~~~~~ 72 (249)
|+|||.||||..|+++..-|. .+.|+...+.+|+.++||.. ++.+..-.+-|-.-+++|+.+...
T Consensus 137 VlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~--- 211 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIA--- 211 (601)
T ss_pred EEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHH---
Confidence 899999999999998876554 45566666899999999963 344444567888899999999986
Q ss_pred CCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 73 DFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 73 ~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
..+.+++++.|+|.|+|+.-...-......+ ..++..|+.|+.+
T Consensus 212 --aFGGnp~~vTLFGESAGaASv~aHLlsP~S~----glF~raIlQSGS~ 255 (601)
T KOG4389|consen 212 --AFGGNPSRVTLFGESAGAASVVAHLLSPGSR----GLFHRAILQSGSL 255 (601)
T ss_pred --HhCCCcceEEEeccccchhhhhheecCCCch----hhHHHHHhhcCCC
Confidence 6788999999999999996554444432222 2466666666544
No 138
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.87 E-value=3e-08 Score=74.30 Aligned_cols=98 Identities=19% Similarity=0.202 Sum_probs=72.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC----CCCchhhHHHHHHHHHhhccCCCCCCCc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR----YPSQYDDGIDVLKFIDTKISTVEDFPAC 77 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~----~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 77 (249)
.+||=+||.+ ||..+ +..+...|.+ .|++++.+||+|.+... ....-++-...++.+.+.+.
T Consensus 36 gTVv~~hGsP---GSH~D--FkYi~~~l~~-~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~-------- 101 (297)
T PF06342_consen 36 GTVVAFHGSP---GSHND--FKYIRPPLDE-AGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELG-------- 101 (297)
T ss_pred eeEEEecCCC---CCccc--hhhhhhHHHH-cCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcC--------
Confidence 3789999944 67666 5556666666 59999999999865432 23334566677777777764
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
++ ++++.+|||.|+-.|++++... +..|+++++|.-
T Consensus 102 i~-~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~G 137 (297)
T PF06342_consen 102 IK-GKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPPG 137 (297)
T ss_pred CC-CceEEEEeccchHHHHHHHhcC--------ccceEEEecCCc
Confidence 55 7899999999999999999974 456888888753
No 139
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.86 E-value=2e-08 Score=78.05 Aligned_cols=94 Identities=22% Similarity=0.183 Sum_probs=67.5
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC---------------CCCCchhhHHHHHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN---------------RYPSQYDDGIDVLKFID 65 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~---------------~~~~~~~d~~~~~~~l~ 65 (249)
+|+|++-||-|- +.++ +...++.+++. ||+|..+++.++... .+-+...|+...+.+|.
T Consensus 71 ~PlvvlshG~Gs---~~~~--f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 71 LPLVVLSHGSGS---YVTG--FAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CCeEEecCCCCC---Cccc--hhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 699999999552 2233 67778888885 999999999874211 01134567888888887
Q ss_pred hhccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 66 TKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
+.... .++.-.++..+|.++|||.||+.++.++..
T Consensus 145 ~~~~s-P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 145 QLTAS-PALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HhhcC-cccccccCccceEEEecccccHHHHHhccc
Confidence 77111 123456788999999999999999988853
No 140
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.86 E-value=2.8e-07 Score=64.09 Aligned_cols=120 Identities=10% Similarity=0.078 Sum_probs=68.3
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTD 159 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (249)
.++++|++||.|+.+++.++.+.. ..++|+++++|.-...........
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~------~~V~GalLVAppd~~~~~~~~~~~-------------------------- 105 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQ------RQVAGALLVAPPDVSRPEIRPKHL-------------------------- 105 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhh------hccceEEEecCCCccccccchhhc--------------------------
Confidence 356999999999999999998843 389999999985432211000000
Q ss_pred CCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHH
Q 041117 160 RDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDV 238 (249)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~ 238 (249)
....++ ...+..+ |.+++++.+|++++. +.++.+.+. -...++....+||. ........ .+....+
T Consensus 106 ---~tf~~~-----p~~~lpf-ps~vvaSrnDp~~~~--~~a~~~a~~-wgs~lv~~g~~GHi-N~~sG~g~wpeg~~~l 172 (181)
T COG3545 106 ---MTFDPI-----PREPLPF-PSVVVASRNDPYVSY--EHAEDLANA-WGSALVDVGEGGHI-NAESGFGPWPEGYALL 172 (181)
T ss_pred ---cccCCC-----ccccCCC-ceeEEEecCCCCCCH--HHHHHHHHh-ccHhheeccccccc-chhhcCCCcHHHHHHH
Confidence 000000 1111122 599999999999963 222333221 13467778888883 32222222 4555555
Q ss_pred HHHHHh
Q 041117 239 GNFIRD 244 (249)
Q Consensus 239 ~~fl~~ 244 (249)
.+++.+
T Consensus 173 ~~~~s~ 178 (181)
T COG3545 173 AQLLSR 178 (181)
T ss_pred HHHhhh
Confidence 555443
No 141
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.83 E-value=2.3e-08 Score=74.58 Aligned_cols=106 Identities=13% Similarity=0.166 Sum_probs=65.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHH-------hCCcEEEeecCCCCCC----CCCCCchhhHHHHHHHHHhhccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAK-------EIPAVVISVNYRLAPE----NRYPSQYDDGIDVLKFIDTKIST 70 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~-------~~g~~v~~~d~r~~~~----~~~~~~~~d~~~~~~~l~~~~~~ 70 (249)
..|||+||.+ |+.. .++.+...+.+ ...+.++..||..... .....+.+-+.++++.+.+...
T Consensus 5 ~pVlFIhG~~---Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~- 78 (225)
T PF07819_consen 5 IPVLFIHGNA---GSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYK- 78 (225)
T ss_pred CEEEEECcCC---CCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhh-
Confidence 4799999933 3422 24444444421 1147788888865321 2223445566667777766551
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
....+.++++|+||||||.+|..++..... .+..++.+|.++.
T Consensus 79 ----~~~~~~~~vilVgHSmGGlvar~~l~~~~~---~~~~v~~iitl~t 121 (225)
T PF07819_consen 79 ----SNRPPPRSVILVGHSMGGLVARSALSLPNY---DPDSVKTIITLGT 121 (225)
T ss_pred ----hccCCCCceEEEEEchhhHHHHHHHhcccc---ccccEEEEEEEcC
Confidence 122467899999999999998888775432 2246888887753
No 142
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.83 E-value=3.8e-08 Score=71.24 Aligned_cols=201 Identities=14% Similarity=0.023 Sum_probs=103.4
Q ss_pred chhHHHHHHHHhCCcEEEeecCCCCCCCCCC-----------CchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecc
Q 041117 21 RYDDHCRRLAKEIPAVVISVNYRLAPENRYP-----------SQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDS 89 (249)
Q Consensus 21 ~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S 89 (249)
.|+.++...++ .||.|+.+|||+.++.... -...|...+++++.+.. ..-+...+|||
T Consensus 45 fYRrfA~~a~~-~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~----------~~~P~y~vgHS 113 (281)
T COG4757 45 FYRRFAAAAAK-AGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL----------PGHPLYFVGHS 113 (281)
T ss_pred HhHHHHHHhhc-cCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC----------CCCceEEeecc
Confidence 36777776666 4999999999997654321 12568888899888765 34679999999
Q ss_pred hhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccc------------------cccCCCCccchhhHHHHHH
Q 041117 90 AGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEE------------------DLNDITPLVSLRRSDWMWT 151 (249)
Q Consensus 90 ~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 151 (249)
+||.+.-.+.... ... .--.+......+++........... .......-++...++++.+
T Consensus 114 ~GGqa~gL~~~~~-k~~-a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~R 191 (281)
T COG4757 114 FGGQALGLLGQHP-KYA-AFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWAR 191 (281)
T ss_pred ccceeecccccCc-ccc-eeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHH
Confidence 9998655444431 000 0001111122233332211111000 0000011122233333322
Q ss_pred hhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCCCceEEEEeCCC----ceeeee
Q 041117 152 AFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHGKEAYLIEYPNA----VHGFYI 225 (249)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~----~H~~~~ 225 (249)
-.-.+....+.+....+ .+..+...+ |++.+...+|+.+|.+ ..+.+... +.+++.+.++.. ||.-..
T Consensus 192 wcR~p~y~fddp~~~~~---~q~yaaVrt-Pi~~~~~~DD~w~P~As~d~f~~~y~--nApl~~~~~~~~~~~lGH~gyf 265 (281)
T COG4757 192 WCRHPRYYFDDPAMRNY---RQVYAAVRT-PITFSRALDDPWAPPASRDAFASFYR--NAPLEMRDLPRAEGPLGHMGYF 265 (281)
T ss_pred HhcCccccccChhHhHH---HHHHHHhcC-ceeeeccCCCCcCCHHHHHHHHHhhh--cCcccceecCcccCcccchhhh
Confidence 21111122222222111 112222334 5999999999999854 44444444 446677777654 885332
Q ss_pred cCCCChhHHHHHHHHHH
Q 041117 226 FPELHEGSFIDDVGNFI 242 (249)
Q Consensus 226 ~~~~~~~~~~~~~~~fl 242 (249)
.+.- +...+++++|+
T Consensus 266 R~~~--Ealwk~~L~w~ 280 (281)
T COG4757 266 REPF--EALWKEMLGWF 280 (281)
T ss_pred ccch--HHHHHHHHHhh
Confidence 2211 67888888876
No 143
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.76 E-value=6.3e-09 Score=81.83 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=62.3
Q ss_pred CCEEEEEecCccccCCC-CccchhHHHHHHHHh--CCcEEEeecCCCCCCCCCCCch-------hhHHHHHHHHHhhccC
Q 041117 1 LPVIVYFHGGGFVLLAA-NSKRYDDHCRRLAKE--IPAVVISVNYRLAPENRYPSQY-------DDGIDVLKFIDTKIST 70 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~-~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~~~~~-------~d~~~~~~~l~~~~~~ 70 (249)
.|++|++||.. ++. ...+...+.+.+..+ .++.|+++|+.......+.... +.+...+..|.+..
T Consensus 71 ~pt~iiiHGw~---~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~-- 145 (331)
T PF00151_consen 71 KPTVIIIHGWT---GSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF-- 145 (331)
T ss_dssp SEEEEEE--TT----TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCeEEEEcCcC---CcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc--
Confidence 48999999932 344 334356666767665 5899999999743222222222 23344455555333
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+++.++++|+|||+||++|-.++.+... + .++..++.+-|.-
T Consensus 146 ------g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~---~ki~rItgLDPAg 187 (331)
T PF00151_consen 146 ------GVPPENIHLIGHSLGAHVAGFAGKYLKG-G---GKIGRITGLDPAG 187 (331)
T ss_dssp ---------GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-
T ss_pred ------CCChhHEEEEeeccchhhhhhhhhhccC-c---ceeeEEEecCccc
Confidence 3688999999999999999999988754 2 2566666665543
No 144
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.75 E-value=1.3e-07 Score=75.84 Aligned_cols=90 Identities=10% Similarity=-0.096 Sum_probs=62.6
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCCCCC---CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHH
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAPENR---YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a 99 (249)
+.+++.|.+ |+.|+..|+.-....+ ..-.++|..+.+....+. ++.+ ++++|.|+||.+++.++
T Consensus 120 RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~----------~G~~-v~l~GvCqgG~~~laa~ 186 (406)
T TIGR01849 120 RSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRF----------LGPD-IHVIAVCQPAVPVLAAV 186 (406)
T ss_pred HHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHH----------hCCC-CcEEEEchhhHHHHHHH
Confidence 677788876 9999999998655333 333455555433333332 2444 99999999999999888
Q ss_pred HHhccccccccccccccccccCCCCCC
Q 041117 100 VRANECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
+...+.+ .+..++.++++.+.+|...
T Consensus 187 Al~a~~~-~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 187 ALMAENE-PPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHHHhcC-CCCCcceEEEEecCccCCC
Confidence 7765432 2346999999988887765
No 145
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=3.7e-07 Score=71.08 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=43.4
Q ss_pred cccCCCCcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 175 ISRVDIPATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 175 ~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
+.+.+ .|+|++.-+.|.++|. .++.++.++..+. -..+-...||.-++... +.+...+.+||+.
T Consensus 302 l~~i~-~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~--~~~i~S~~GHDaFL~e~---~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIK-APVLVVGITSDWLFPPELQRALAEALPAAGA--LREIDSPYGHDAFLVES---EAVGPLIRKFLAL 367 (368)
T ss_pred HhcCc-cCEEEEEecccccCCHHHHHHHHHhccccCc--eEEecCCCCchhhhcch---hhhhHHHHHHhhc
Confidence 33344 4699999999999974 4667777776554 23344466997665543 6677888888864
No 146
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.69 E-value=7.6e-07 Score=71.39 Aligned_cols=108 Identities=19% Similarity=0.146 Sum_probs=75.2
Q ss_pred CCEEEEEecCccccCCCCcc----chhHHHHHHHHhCCcEEEeecCCCCC------------CC-----CC-CCchhhHH
Q 041117 1 LPVIVYFHGGGFVLLAANSK----RYDDHCRRLAKEIPAVVISVNYRLAP------------EN-----RY-PSQYDDGI 58 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~----~~~~~~~~l~~~~g~~v~~~d~r~~~------------~~-----~~-~~~~~d~~ 58 (249)
+|+|++.|| ..+++... .-...+--|++ .||.|..-|-||.. +. ++ +-...|+-
T Consensus 73 rp~Vll~HG---Ll~sS~~Wv~n~p~~sLaf~Lad-aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLP 148 (403)
T KOG2624|consen 73 RPVVLLQHG---LLASSSSWVLNGPEQSLAFLLAD-AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLP 148 (403)
T ss_pred CCcEEEeec---cccccccceecCccccHHHHHHH-cCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHH
Confidence 599999999 33332220 01233444555 59999999999731 11 11 22467899
Q ss_pred HHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCC
Q 041117 59 DVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
+.++++.+.- +.++++.+|||.|+......+...++. ..+++..++++|+....
T Consensus 149 A~IdyIL~~T----------~~~kl~yvGHSQGtt~~fv~lS~~p~~---~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 149 AMIDYILEKT----------GQEKLHYVGHSQGTTTFFVMLSERPEY---NKKIKSFIALAPAAFPK 202 (403)
T ss_pred HHHHHHHHhc----------cccceEEEEEEccchhheehhcccchh---hhhhheeeeecchhhhc
Confidence 9999998764 568999999999999998888765442 24799999999987443
No 147
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.69 E-value=1.9e-06 Score=68.30 Aligned_cols=173 Identities=17% Similarity=0.069 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccc
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDL 134 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~ 134 (249)
-|...|+.++..... . ..+.-|++++|+|.||++|.+.|.- .|-.+.+++--|.+....-..--.+..
T Consensus 164 iD~INAl~~l~k~~~-----~-~~~~lp~I~~G~s~G~yla~l~~k~------aP~~~~~~iDns~~~~p~l~~I~Gre~ 231 (403)
T PF11144_consen 164 IDIINALLDLKKIFP-----K-NGGGLPKIYIGSSHGGYLAHLCAKI------APWLFDGVIDNSSYALPPLRYIFGREI 231 (403)
T ss_pred HHHHHHHHHHHHhhh-----c-ccCCCcEEEEecCcHHHHHHHHHhh------CccceeEEEecCccccchhheeeeeec
Confidence 455566666665543 1 1123489999999999999999876 556788888887766432111000000
Q ss_pred cCCCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCC--------------ccccc---c-CCCCcEEEEecCCCcchhh
Q 041117 135 NDITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKH--------------AVDIS---R-VDIPATIVIVGGFDPLKDW 196 (249)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~---~-~~~pP~li~~g~~D~~~~~ 196 (249)
........... .......-.....+.|..+..++. ...+. . ..-|-.+..|+..|.+.|.
T Consensus 232 ~~~~y~~~~~~--~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~ 309 (403)
T PF11144_consen 232 DFMKYICSGEF--FNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPA 309 (403)
T ss_pred Ccccccccccc--cccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCH
Confidence 00000000000 000000000001111111110000 00000 0 0223356689999999874
Q ss_pred --HHHHHHHHHHCCCceEEEEeC-----------CCceeeeecCCCChhHHHHHHHHHHHhh
Q 041117 197 --QKRHYQGLKRHGKEAYLIEYP-----------NAVHGFYIFPELHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 197 --~~~~~~~l~~~~~~~~~~~~~-----------~~~H~~~~~~~~~~~~~~~~~~~fl~~~ 245 (249)
..++++.+++.|-+++++.+. +..|++.+.. ..+++.-+.-+.+.
T Consensus 310 ~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~----k~Lf~KeLp~~lek 367 (403)
T PF11144_consen 310 EDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISD----KALFKKELPLMLEK 367 (403)
T ss_pred HHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCH----HHHHHHHhHHHHHH
Confidence 478999999999999999983 4578755432 44444444444333
No 148
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.67 E-value=5e-08 Score=71.90 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=50.1
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcE---EEeecCCCCCCCCCCC-------chhhHHHHHHHHHhhccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAV---VISVNYRLAPENRYPS-------QYDDGIDVLKFIDTKISTVE 72 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~ 72 (249)
+|||+||-+ + .....|..+.+.|.++ ||. +++++|.......... ...+++++++.+++.-
T Consensus 3 PVVlVHG~~---~-~~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T---- 73 (219)
T PF01674_consen 3 PVVLVHGTG---G-NAYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT---- 73 (219)
T ss_dssp -EEEE--TT---T-TTCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH----
T ss_pred CEEEECCCC---c-chhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh----
Confidence 689999943 2 2334488899999986 998 7999996543322111 1245666666666543
Q ss_pred CCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 73 DFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 73 ~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
+. +|-|+||||||.++..+...
T Consensus 74 ------Ga-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 74 ------GA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp ------T---EEEEEETCHHHHHHHHHHH
T ss_pred ------CC-EEEEEEcCCcCHHHHHHHHH
Confidence 55 99999999999999888764
No 149
>COG3150 Predicted esterase [General function prediction only]
Probab=98.65 E-value=7.7e-07 Score=61.22 Aligned_cols=128 Identities=16% Similarity=0.212 Sum_probs=67.6
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
+.+.|+|.|.||+.|..++.+. -+++++ ++|.+.............. .+. .++....
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~--------Girav~-~NPav~P~e~l~gylg~~e-n~y-------------tg~~y~l 115 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLC--------GIRAVV-FNPAVRPYELLTGYLGRPE-NPY-------------TGQEYVL 115 (191)
T ss_pred CCceEEeecchHHHHHHHHHHh--------CChhhh-cCCCcCchhhhhhhcCCCC-CCC-------------CcceEEe
Confidence 4589999999999999999885 354444 5565543222111110000 000 0000000
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCC-CcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHH
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGF-DPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVG 239 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~-D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 239 (249)
....+... .......+..|..+++.... |.+.+ .++.+..+. .+...+.+|..|.|..+ +..++.|.
T Consensus 116 e~~hI~~l--~~~~~~~l~~p~~~~lL~qtgDEvLD-yr~a~a~y~----~~~~~V~dgg~H~F~~f-----~~~l~~i~ 183 (191)
T COG3150 116 ESRHIATL--CVLQFRELNRPRCLVLLSQTGDEVLD-YRQAVAYYH----PCYEIVWDGGDHKFKGF-----SRHLQRIK 183 (191)
T ss_pred ehhhHHHH--HHhhccccCCCcEEEeecccccHHHH-HHHHHHHhh----hhhheeecCCCccccch-----HHhHHHHH
Confidence 00000000 00112222345455555544 88876 344444554 56678889999988766 68888888
Q ss_pred HHHH
Q 041117 240 NFIR 243 (249)
Q Consensus 240 ~fl~ 243 (249)
.|..
T Consensus 184 aF~g 187 (191)
T COG3150 184 AFKG 187 (191)
T ss_pred HHhc
Confidence 8864
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.57 E-value=1.9e-05 Score=58.30 Aligned_cols=199 Identities=19% Similarity=0.276 Sum_probs=105.2
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCC----cEEEeecCCCC--------CCC--------------CCCCchhhH
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIP----AVVISVNYRLA--------PEN--------------RYPSQYDDG 57 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~--------~~~--------------~~~~~~~d~ 57 (249)
.||+||.| |+.++ ...++.++..+.. ..++.+|-.++ ... ....+..=.
T Consensus 48 TIfIhGsg---G~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 48 TIFIHGSG---GTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred eEEEecCC---CChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 48999944 45544 6788888887631 23444443221 111 111122234
Q ss_pred HHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCc--cccccc
Q 041117 58 IDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQ--SEEDLN 135 (249)
Q Consensus 58 ~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~--~~~~~~ 135 (249)
..++.+|..+. +.+++-.+||||||.-...++..+.... .-+.+...+.+..-+......+ ...+..
T Consensus 123 k~~msyL~~~Y----------~i~k~n~VGhSmGg~~~~~Y~~~yg~dk-s~P~lnK~V~l~gpfN~~~l~~de~v~~v~ 191 (288)
T COG4814 123 KKAMSYLQKHY----------NIPKFNAVGHSMGGLGLTYYMIDYGDDK-SLPPLNKLVSLAGPFNVGNLVPDETVTDVL 191 (288)
T ss_pred HHHHHHHHHhc----------CCceeeeeeeccccHHHHHHHHHhcCCC-CCcchhheEEecccccccccCCCcchheee
Confidence 44566666654 6789999999999999999998876432 3356777777766554111110 000000
Q ss_pred CCCC-ccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCC------cchhhH--HHHHHHHHH
Q 041117 136 DITP-LVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFD------PLKDWQ--KRHYQGLKR 206 (249)
Q Consensus 136 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D------~~~~~~--~~~~~~l~~ 206 (249)
...+ .......+.+..++. ..... .-+|++.|+-| ..+|.+ ......+..
T Consensus 192 ~~~~~~~~t~y~~y~~~n~k---------------~v~~~------~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~ 250 (288)
T COG4814 192 KDGPGLIKTPYYDYIAKNYK---------------KVSPN------TEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKK 250 (288)
T ss_pred ccCccccCcHHHHHHHhcce---------------eCCCC------cEEEEEecccccCCcCCCceechHhHHHHHHhcc
Confidence 0011 111111111111110 00011 13899999865 344433 444444555
Q ss_pred CCCceEEEEeCC--CceeeeecCCCCh-hHHHHHHHHHHHh
Q 041117 207 HGKEAYLIEYPN--AVHGFYIFPELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 207 ~~~~~~~~~~~~--~~H~~~~~~~~~~-~~~~~~~~~fl~~ 244 (249)
.+....-.+++| +.|. ..+| ..+.+.+..||-+
T Consensus 251 ~~ksy~e~~~~Gk~a~Hs-----~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 251 NGKSYIESLYKGKDARHS-----KLHENPTVAKYVKNFLWE 286 (288)
T ss_pred CcceeEEEeeeCCcchhh-----ccCCChhHHHHHHHHhhc
Confidence 555555445554 5674 2344 8899999999865
No 151
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.56 E-value=6.5e-07 Score=67.26 Aligned_cols=112 Identities=17% Similarity=0.131 Sum_probs=62.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCc--EEEeecCCCCCCC-CCCCc---hhhHHHHHHHHHhhccCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPA--VVISVNYRLAPEN-RYPSQ---YDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~--~v~~~d~r~~~~~-~~~~~---~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
.++||+||... +...-...+.++....++ .++.+.++..+.. .+... .......+..+.+.+.
T Consensus 19 ~vlvfVHGyn~-----~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~------ 87 (233)
T PF05990_consen 19 EVLVFVHGYNN-----SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLA------ 87 (233)
T ss_pred eEEEEEeCCCC-----CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHH------
Confidence 58999999432 111112334455555555 6777887754321 12111 1122222222222211
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhcccccc---ccccccccccccCCCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFS---KLKLIGVIPIQPFFGG 124 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~---~~~~~~~i~~~p~~~~ 124 (249)
...+..+|+|++||||+.+.+............ ...+..+++.+|-++.
T Consensus 88 ~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 88 RAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred hccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 112568999999999999999988776543221 2367888888886543
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.54 E-value=1e-06 Score=72.40 Aligned_cols=169 Identities=14% Similarity=0.085 Sum_probs=94.3
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhC-CcEEEeecCCC-CCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEI-PAVVISVNYRL-APENRYPSQYDDGIDVLKFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 79 (249)
|+++++||++ ..+. .+..++.+-.++.-.. -.-+..+|++. +++.......+.+..+.++..... .-.+.
T Consensus 177 pl~i~aps~p-~ap~-tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei------~gefp 248 (784)
T KOG3253|consen 177 PLAIKAPSTP-LAPK-TSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEI------TGEFP 248 (784)
T ss_pred ceEEeccCCC-CCCc-cchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhh------hccCC
Confidence 7899999977 2222 2222445555554431 13345566653 333333334444444444333222 22356
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTD 159 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (249)
..+|+|+|.|||+.++.+..... ....+.++|.+.=.++..... ...
T Consensus 249 ha~IiLvGrsmGAlVachVSpsn-----sdv~V~~vVCigypl~~vdgp----------------------------rgi 295 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSN-----SDVEVDAVVCIGYPLDTVDGP----------------------------RGI 295 (784)
T ss_pred CCceEEEecccCceeeEEecccc-----CCceEEEEEEecccccCCCcc----------------------------cCC
Confidence 78999999999977766665532 122477777763222111000 001
Q ss_pred CCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhh-H-HHHHHHHHHCCCceEEEEeCCCceeeeec
Q 041117 160 RDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDW-Q-KRHYQGLKRHGKEAYLIEYPNAVHGFYIF 226 (249)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 226 (249)
+++ .+...+ .|+|++.|..|..++. . .++.++++ ..++++++.+++|.+..-
T Consensus 296 rDE-----------~Lldmk-~PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 296 RDE-----------ALLDMK-QPVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMAIP 349 (784)
T ss_pred cch-----------hhHhcC-CceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCccccCC
Confidence 111 111112 4699999999998853 2 44555555 478999999999987754
No 153
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.49 E-value=5e-06 Score=65.90 Aligned_cols=88 Identities=10% Similarity=0.087 Sum_probs=62.3
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCCCCCCCCch-----hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHH
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAPENRYPSQY-----DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHN 97 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~-----~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~ 97 (249)
..+++.+.++ |..|++++++..........+ +.+.++++.+.+.. ..++|.++|++.||++++.
T Consensus 129 ~s~V~~l~~~-g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~it----------g~~~InliGyCvGGtl~~~ 197 (445)
T COG3243 129 KSLVRWLLEQ-GLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDIT----------GQKDINLIGYCVGGTLLAA 197 (445)
T ss_pred ccHHHHHHHc-CCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHh----------CccccceeeEecchHHHHH
Confidence 5677878875 999999998864332223333 44556666666654 4588999999999999999
Q ss_pred HHHHhccccccccccccccccccCCCCCC
Q 041117 98 VAVRANECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 98 ~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
++.....+ +++.+.++....|+..
T Consensus 198 ala~~~~k-----~I~S~T~lts~~DF~~ 221 (445)
T COG3243 198 ALALMAAK-----RIKSLTLLTSPVDFSH 221 (445)
T ss_pred HHHhhhhc-----ccccceeeecchhhcc
Confidence 99876542 5888887766665544
No 154
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.45 E-value=1.2e-05 Score=59.20 Aligned_cols=217 Identities=15% Similarity=0.182 Sum_probs=113.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCC--cEEEee---cCCCCC-------CCCCC---CchhhHHHHHHHHHh
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIP--AVVISV---NYRLAP-------ENRYP---SQYDDGIDVLKFIDT 66 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g--~~v~~~---d~r~~~-------~~~~~---~~~~d~~~~~~~l~~ 66 (249)
|.++++.|.. .....|.++++.|-.+.+ ..+..+ ++-+.| .+... ..-+++..=++++.+
T Consensus 30 ~li~~IpGNP-----G~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 30 PLIVWIPGNP-----GLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred eEEEEecCCC-----CchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 6788888843 234448999999988755 223333 333333 11111 112455566777776
Q ss_pred hccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCC--------
Q 041117 67 KISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDIT-------- 138 (249)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~-------- 138 (249)
... ...+++++|||-|+++.+.+..... ...++..++++.|.+..-...+.........
T Consensus 105 ~~P---------k~~ki~iiGHSiGaYm~Lqil~~~k----~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~ 171 (301)
T KOG3975|consen 105 YVP---------KDRKIYIIGHSIGAYMVLQILPSIK----LVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVS 171 (301)
T ss_pred hCC---------CCCEEEEEecchhHHHHHHHhhhcc----cccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhh
Confidence 653 5578999999999999999998532 2235667777767654332222222111100
Q ss_pred ------CccchhhHHHHHHhhCCCCCCCCCCCC----CC-----------CCC--------CccccccCCCCcEEEEecC
Q 041117 139 ------PLVSLRRSDWMWTAFLPEGTDRDYPAA----NT-----------FGK--------HAVDISRVDIPATIVIVGG 189 (249)
Q Consensus 139 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~--------~~~~~~~~~~pP~li~~g~ 189 (249)
-.+.+...+.+...+.-.......... .. .+. ....+-.....-+.+.+|+
T Consensus 172 lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt 251 (301)
T KOG3975|consen 172 LTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGT 251 (301)
T ss_pred eeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccC
Confidence 001122233322221110000000000 00 000 0001111223458999999
Q ss_pred CCcchhhHHHHHHHHHHCC--CceEEEEeCCCceeeeecCCCChhHHHHHHHHHH
Q 041117 190 FDPLKDWQKRHYQGLKRHG--KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFI 242 (249)
Q Consensus 190 ~D~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl 242 (249)
.|..+| ..+.+.+++.- .++++.+ ++..|.|..... +..++.+.+.+
T Consensus 252 ~DgW~p--~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~---q~ma~~v~d~~ 300 (301)
T KOG3975|consen 252 NDGWVP--SHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHA---QYMANAVFDMI 300 (301)
T ss_pred CCCCcc--hHHHHHHhhhcchhceeecc-ccCCcceeeccc---HHHHHHHHHhh
Confidence 999998 55666666542 3456655 788998886544 55555555543
No 155
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.45 E-value=7.9e-06 Score=61.23 Aligned_cols=44 Identities=16% Similarity=-0.008 Sum_probs=37.0
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
.+..+.++..|+|||+||.+++...++. +..+...+++||.+-+
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~~------p~~F~~y~~~SPSlWw 174 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLTY------PDCFGRYGLISPSLWW 174 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhcC------cchhceeeeecchhhh
Confidence 4668889999999999999999999984 4478999999986643
No 156
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.43 E-value=1.9e-05 Score=58.57 Aligned_cols=203 Identities=19% Similarity=0.172 Sum_probs=107.5
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC--CCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR--YPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
.||.+=||.|+ |+.-.-.|+.+++.|+++ ||.|++.-|...-+|. .....+....+++.+.+... .....
T Consensus 18 gvihFiGGaf~-ga~P~itYr~lLe~La~~-Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~------~~~~~ 89 (250)
T PF07082_consen 18 GVIHFIGGAFV-GAAPQITYRYLLERLADR-GYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGG------LDPAY 89 (250)
T ss_pred EEEEEcCccee-ccCcHHHHHHHHHHHHhC-CcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcC------CCccc
Confidence 47888888875 555555699999999986 9999999886532221 01112333344444444321 11112
Q ss_pred CceEEEecchhHHHHHHHHHHhcccccccccccccccccc-CCCCCCCCcccccccC--CCCcc-chhhHHHHHHhhCCC
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP-FFGGEERTQSEEDLND--ITPLV-SLRRSDWMWTAFLPE 156 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p-~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~ 156 (249)
-+++=+|||+|+-+-+.+...+.. .-++-+++|= -...+...+-...... ...+. ++.....+.+..
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~------~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~--- 160 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDV------ERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRES--- 160 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccC------cccceEEEecCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHh---
Confidence 368889999999998888766432 2244444320 0000000000000000 00000 011111111110
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCC-CceEEEEeCCCceeeeecCCCCh---h
Q 041117 157 GTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHG-KEAYLIEYPNAVHGFYIFPELHE---G 232 (249)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~---~ 232 (249)
-..+.++++.=++|.+ +++..+.+.++... .-++....+| .|...+..+.+- +
T Consensus 161 ---------------------Y~~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~ 217 (250)
T PF07082_consen 161 ---------------------YQVRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGS 217 (250)
T ss_pred ---------------------cCCccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCC
Confidence 0234578888888887 66788888888653 2356666765 897655433311 1
Q ss_pred --HHHHHHHHHHHhh
Q 041117 233 --SFIDDVGNFIRDQ 245 (249)
Q Consensus 233 --~~~~~~~~fl~~~ 245 (249)
.-++.+.+|+++.
T Consensus 218 ~ftP~da~~q~~k~~ 232 (250)
T PF07082_consen 218 SFTPLDAVGQWLKQE 232 (250)
T ss_pred ccCchHHHHHHHHHH
Confidence 3456666777654
No 157
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.39 E-value=1.4e-06 Score=67.20 Aligned_cols=71 Identities=23% Similarity=0.319 Sum_probs=53.7
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCCCCCC----CchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHH
Q 041117 24 DHCRRLAKEIPAVVISVNYRLAPENRYP----SQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a 99 (249)
.....+++..+..|+.+||||...+..+ ..+.|..+.+++|++... ++++++|++.|||.||.++...+
T Consensus 161 ~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~-------G~ka~~Ii~yG~SLGG~Vqa~AL 233 (365)
T PF05677_consen 161 DWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ-------GPKAKNIILYGHSLGGGVQAEAL 233 (365)
T ss_pred HHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc-------CCChheEEEeeccccHHHHHHHH
Confidence 4578888889999999999986544333 334566666777776432 46789999999999999988755
Q ss_pred HH
Q 041117 100 VR 101 (249)
Q Consensus 100 ~~ 101 (249)
.+
T Consensus 234 ~~ 235 (365)
T PF05677_consen 234 KK 235 (365)
T ss_pred Hh
Confidence 54
No 158
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.34 E-value=3.6e-06 Score=63.57 Aligned_cols=102 Identities=17% Similarity=0.070 Sum_probs=67.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-CCCCchhhHHHHH-HHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-RYPSQYDDGIDVL-KFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~~ 79 (249)
|+++++|+.+ |... .|..+...+.. -..|+.+++++.... .....++++.+.+ +.|++.. +
T Consensus 1 ~pLF~fhp~~---G~~~--~~~~L~~~l~~--~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~Q----------P 63 (257)
T COG3319 1 PPLFCFHPAG---GSVL--AYAPLAAALGP--LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQ----------P 63 (257)
T ss_pred CCEEEEcCCC---CcHH--HHHHHHHHhcc--CceeeccccCcccccccccCCHHHHHHHHHHHHHHhC----------C
Confidence 6889999943 2322 26677777755 478888888875422 2233455554443 4444433 4
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
..++.|.|+|+||.+|...|.+....+. .+..++++-+...
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G~---~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQGE---EVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCCC---eEEEEEEeccCCC
Confidence 4689999999999999999999876553 6666777655544
No 159
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.32 E-value=7.6e-06 Score=59.25 Aligned_cols=113 Identities=17% Similarity=0.126 Sum_probs=71.6
Q ss_pred eEEEecchhHHHHHHHHHHhcc--ccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCCCC
Q 041117 83 CFVAGDSAGGNLAHNVAVRANE--CKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGTDR 160 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~~~~--~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
=.|+|+|.|+.++..++..... .-...+.++-+|++|++.-....... .
T Consensus 106 DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~---------------------~-------- 156 (230)
T KOG2551|consen 106 DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDE---------------------S-------- 156 (230)
T ss_pred ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhh---------------------h--------
Confidence 4799999999999999982211 11123456888888876533210000 0
Q ss_pred CCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhH--HHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHH
Q 041117 161 DYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQ--KRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDV 238 (249)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 238 (249)
...+....|.|-+.|+.|.+++.. ..+++..+ +..+...+| ||..... ..+.+.+
T Consensus 157 -------------~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~----~a~vl~Hpg-gH~VP~~-----~~~~~~i 213 (230)
T KOG2551|consen 157 -------------AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK----DATVLEHPG-GHIVPNK-----AKYKEKI 213 (230)
T ss_pred -------------hhccCCCCCeeEEecccceeecchHHHHHHHhcC----CCeEEecCC-CccCCCc-----hHHHHHH
Confidence 000012256999999999999743 55666555 446666665 9954322 7888889
Q ss_pred HHHHHhhhc
Q 041117 239 GNFIRDQSA 247 (249)
Q Consensus 239 ~~fl~~~~~ 247 (249)
++|+...+.
T Consensus 214 ~~fi~~~~~ 222 (230)
T KOG2551|consen 214 ADFIQSFLQ 222 (230)
T ss_pred HHHHHHHHH
Confidence 999887654
No 160
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.30 E-value=1.5e-05 Score=60.39 Aligned_cols=60 Identities=17% Similarity=0.289 Sum_probs=50.1
Q ss_pred CcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHH
Q 041117 181 PATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFI 242 (249)
Q Consensus 181 pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl 242 (249)
+|-|.++++.|.+++. ..++++..++.|.+++.+.++++.|+-.+.... +++++.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p--~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHP--DRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCH--HHHHHHHHhhC
Confidence 4799999999999964 488999999999999999999999986654332 88888888774
No 161
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.26 E-value=5.4e-05 Score=62.97 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=65.3
Q ss_pred HHHHhCCcEEEeecCCCCCCCC-----C-CCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 28 RLAKEIPAVVISVNYRLAPENR-----Y-PSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 28 ~l~~~~g~~v~~~d~r~~~~~~-----~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.++.+ ||+|+..|-||+..+. + ....+|..+.++|+.++. ....+|..+|.|.+|...+++|..
T Consensus 75 ~~aa~-GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~Qp---------WsNG~Vgm~G~SY~g~tq~~~Aa~ 144 (563)
T COG2936 75 WFAAQ-GYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQP---------WSNGNVGMLGLSYLGFTQLAAAAL 144 (563)
T ss_pred eeecC-ceEEEEecccccccCCcccceeccccccchhHHHHHHHhCC---------ccCCeeeeecccHHHHHHHHHHhc
Confidence 45664 9999999999875432 2 236889999999999876 577899999999999999999987
Q ss_pred hccccccccccccccccccCCCC
Q 041117 102 ANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
.++.+|+++..++..+.
T Consensus 145 ------~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 145 ------QPPALKAIAPTEGLVDR 161 (563)
T ss_pred ------CCchheeeccccccccc
Confidence 56678888877776653
No 162
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.22 E-value=5.7e-06 Score=67.66 Aligned_cols=92 Identities=16% Similarity=0.046 Sum_probs=58.2
Q ss_pred cchhHHHHHHHHhCCcEEEeecCCCCCCCCC-----CCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHH
Q 041117 20 KRYDDHCRRLAKEIPAVVISVNYRLAPENRY-----PSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNL 94 (249)
Q Consensus 20 ~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~ 94 (249)
..|..+++.|.+. ||.+ ..|.++.|-.-. ...++++.+.++.+.+.. +.++++|+||||||.+
T Consensus 108 ~~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~----------g~~kV~LVGHSMGGlv 175 (440)
T PLN02733 108 YYFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS----------GGKKVNIISHSMGGLL 175 (440)
T ss_pred HHHHHHHHHHHHc-CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc----------CCCCEEEEEECHhHHH
Confidence 4467888998884 8765 667666553211 112344444444444332 4579999999999999
Q ss_pred HHHHHHHhccccccccccccccccccCCCCC
Q 041117 95 AHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 95 a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
++.++...++. ....++.+|.+++.....
T Consensus 176 a~~fl~~~p~~--~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 176 VKCFMSLHSDV--FEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHCCHh--HHhHhccEEEECCCCCCC
Confidence 99988775432 123577777776655443
No 163
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.14 E-value=2.3e-06 Score=59.13 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC
Q 041117 57 GIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND 136 (249)
Q Consensus 57 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~ 136 (249)
-++.-+++++.. +. ...++-|.||||..|+.+..++ |..+.++|.+|++++.+.......+...
T Consensus 87 H~AyerYv~eEa---------lp-gs~~~sgcsmGayhA~nfvfrh------P~lftkvialSGvYdardffg~yyddDv 150 (227)
T COG4947 87 HRAYERYVIEEA---------LP-GSTIVSGCSMGAYHAANFVFRH------PHLFTKVIALSGVYDARDFFGGYYDDDV 150 (227)
T ss_pred HHHHHHHHHHhh---------cC-CCccccccchhhhhhhhhheeC------hhHhhhheeecceeeHHHhccccccCce
Confidence 334456777665 23 4588999999999999999984 4578999999999987644322221100
Q ss_pred CCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEe
Q 041117 137 ITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEY 216 (249)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~ 216 (249)
++ ..-..|++... .+ ..+.+.+.--+.+..|.+|+..+....+.+.+.+...+..+.+.
T Consensus 151 ---~y------nsP~dylpg~~----------dp--~~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~W 209 (227)
T COG4947 151 ---YY------NSPSDYLPGLA----------DP--FRLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVW 209 (227)
T ss_pred ---ee------cChhhhccCCc----------Ch--HHHHHHhhccEEEEecCccccccchHHHHHHhccccccHHHHHh
Confidence 00 00001111000 00 01111122238889999999998889999999887777778888
Q ss_pred CCCceee
Q 041117 217 PNAVHGF 223 (249)
Q Consensus 217 ~~~~H~~ 223 (249)
.+..|.+
T Consensus 210 ggvaHdw 216 (227)
T COG4947 210 GGVAHDW 216 (227)
T ss_pred ccccccc
Confidence 7777753
No 164
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.14 E-value=0.00021 Score=51.98 Aligned_cols=90 Identities=16% Similarity=0.080 Sum_probs=62.2
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC----CCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHH
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA----PENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHN 97 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~----~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~ 97 (249)
|...+...+.+.+|..+-+-.+-+ +-.......+|+..+++++.... ....|+|+|||.|..=.+.
T Consensus 54 y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~----------fSt~vVL~GhSTGcQdi~y 123 (299)
T KOG4840|consen 54 YTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCG----------FSTDVVLVGHSTGCQDIMY 123 (299)
T ss_pred cHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccC----------cccceEEEecCccchHHHH
Confidence 433344444446999888865543 33455667788888888665432 2358999999999998888
Q ss_pred HHHHhccccccccccccccccccCCCCC
Q 041117 98 VAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 98 ~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
+..+-. .+..+.+.|+.+|+.|.+
T Consensus 124 YlTnt~----~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 124 YLTNTT----KDRKIRAAILQAPVSDRE 147 (299)
T ss_pred HHHhcc----chHHHHHHHHhCccchhh
Confidence 885422 233688999999998765
No 165
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.14 E-value=6.6e-06 Score=60.48 Aligned_cols=185 Identities=14% Similarity=0.087 Sum_probs=88.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCC----CCC----CCCCCchhhHHHHHHHHHhhccCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRL----APE----NRYPSQYDDGIDVLKFIDTKISTVED 73 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~----~~~----~~~~~~~~d~~~~~~~l~~~~~~~~~ 73 (249)
|+||...|-| ..+..+..++..|+.+ |+.|+.+|.-- +.+ .+......++...++|+.+.
T Consensus 31 ~tiliA~Gf~-----rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~------ 98 (294)
T PF02273_consen 31 NTILIAPGFA-----RRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATR------ 98 (294)
T ss_dssp -EEEEE-TT------GGGGGGHHHHHHHHTT-T--EEEE---B-------------HHHHHHHHHHHHHHHHHT------
T ss_pred CeEEEecchh-----HHHHHHHHHHHHHhhC-CeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhc------
Confidence 7888888854 3444488999999985 99999998642 121 12223456788888999854
Q ss_pred CCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCccccc----------ccCC-----C
Q 041117 74 FPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEED----------LNDI-----T 138 (249)
Q Consensus 74 ~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~----------~~~~-----~ 138 (249)
+..++.|+..|.-|-+|+..+.+. .+.-+|..-++++.......... .... .
T Consensus 99 -----g~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh 165 (294)
T PF02273_consen 99 -----GIRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGH 165 (294)
T ss_dssp -----T---EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTE
T ss_pred -----CCCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCccccccc
Confidence 457899999999999999999853 34555555565544321111000 0000 0
Q ss_pred CccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHHHHHHC-CCceEEEEeC
Q 041117 139 PLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQGLKRH-GKEAYLIEYP 217 (249)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~ 217 (249)
.+-...+....++. .... ......+.+... .|++..++++|..+.+. +..+.+... ...++++..+
T Consensus 166 ~l~~~vFv~dc~e~----~w~~-------l~ST~~~~k~l~-iP~iaF~A~~D~WV~q~-eV~~~~~~~~s~~~klysl~ 232 (294)
T PF02273_consen 166 NLGAEVFVTDCFEH----GWDD-------LDSTINDMKRLS-IPFIAFTANDDDWVKQS-EVEELLDNINSNKCKLYSLP 232 (294)
T ss_dssp EEEHHHHHHHHHHT----T-SS-------HHHHHHHHTT---S-EEEEEETT-TTS-HH-HHHHHHTT-TT--EEEEEET
T ss_pred ccchHHHHHHHHHc----CCcc-------chhHHHHHhhCC-CCEEEEEeCCCccccHH-HHHHHHHhcCCCceeEEEec
Confidence 00011111111111 0000 000111222223 46999999999999632 333333322 3468999999
Q ss_pred CCceeee
Q 041117 218 NAVHGFY 224 (249)
Q Consensus 218 ~~~H~~~ 224 (249)
|+.|...
T Consensus 233 Gs~HdL~ 239 (294)
T PF02273_consen 233 GSSHDLG 239 (294)
T ss_dssp T-SS-TT
T ss_pred Cccchhh
Confidence 9999644
No 166
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.07 E-value=1.6e-05 Score=74.62 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=66.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCC-CCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPEN-RYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
|.++++||.| |+ ...|..+.+.+.. ++.|+.++.++.... .....++++.+.+....+... ..
T Consensus 1069 ~~l~~lh~~~---g~--~~~~~~l~~~l~~--~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~---------~~ 1132 (1296)
T PRK10252 1069 PTLFCFHPAS---GF--AWQFSVLSRYLDP--QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ---------PH 1132 (1296)
T ss_pred CCeEEecCCC---Cc--hHHHHHHHHhcCC--CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---------CC
Confidence 5689999955 23 2347788877754 689999998875432 223455555555444333321 23
Q ss_pred CceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
.+++++|||+||.+|..+|.+.... +..+..++++.+
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~---~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRAR---GEEVAFLGLLDT 1169 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHc---CCceeEEEEecC
Confidence 5899999999999999999987543 236777777654
No 167
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.07 E-value=0.00058 Score=53.69 Aligned_cols=117 Identities=10% Similarity=0.168 Sum_probs=67.5
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccCCCCccchhhHHHHHHhhCCCCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLNDITPLVSLRRSDWMWTAFLPEGT 158 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (249)
+..+++|+||+.|+..++.+..... ...+.++|+++|.......... ...
T Consensus 191 ~~~~ivlIg~G~gA~~~~~~la~~~-----~~~~daLV~I~a~~p~~~~n~~---------------l~~---------- 240 (310)
T PF12048_consen 191 GGKNIVLIGHGTGAGWAARYLAEKP-----PPMPDALVLINAYWPQPDRNPA---------------LAE---------- 240 (310)
T ss_pred CCceEEEEEeChhHHHHHHHHhcCC-----CcccCeEEEEeCCCCcchhhhh---------------HHH----------
Confidence 3456999999999999999998752 3358899999886533221000 000
Q ss_pred CCCCCCCCCCCCCccccccCCCCcEEEEecCCCcchhhHHHHHH-HHHHC-CCceEEEEeCCCceeeeecCCCChhHHHH
Q 041117 159 DRDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLKDWQKRHYQ-GLKRH-GKEAYLIEYPNAVHGFYIFPELHEGSFID 236 (249)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~-~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 236 (249)
.+.... .|||=+++.+...........+ ..+++ .....-+.+.+..|...... +.+.+
T Consensus 241 ---------------~la~l~-iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~----~~l~~ 300 (310)
T PF12048_consen 241 ---------------QLAQLK-IPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQ----EQLLR 300 (310)
T ss_pred ---------------HhhccC-CCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHH----HHHHH
Confidence 111113 3588888777443332222222 22222 23455555666666332221 45999
Q ss_pred HHHHHHHhh
Q 041117 237 DVGNFIRDQ 245 (249)
Q Consensus 237 ~~~~fl~~~ 245 (249)
+|..||+++
T Consensus 301 rIrGWL~~~ 309 (310)
T PF12048_consen 301 RIRGWLKRH 309 (310)
T ss_pred HHHHHHHhh
Confidence 999999875
No 168
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.07 E-value=7.8e-05 Score=56.79 Aligned_cols=204 Identities=13% Similarity=0.167 Sum_probs=107.6
Q ss_pred CCEEEEEecCccccCCCCccchh-----HHHHHHHHhCCcEEEeecCCCCCCC--CC-----CCchhhHHHHHHHHHhhc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD-----DHCRRLAKEIPAVVISVNYRLAPEN--RY-----PSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~-----~~~~~l~~~~g~~v~~~d~r~~~~~--~~-----~~~~~d~~~~~~~l~~~~ 68 (249)
+|+||=+|--|. ....-+. +-++.+.+ .+.++-+|-+|..+. .+ -..++++.+.+..+.+..
T Consensus 23 kp~ilT~HDvGl----Nh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f 96 (283)
T PF03096_consen 23 KPAILTYHDVGL----NHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF 96 (283)
T ss_dssp S-EEEEE--TT------HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH
T ss_pred CceEEEeccccc----cchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC
Confidence 478888887442 1111022 23455554 789999998875432 11 223667777777777765
Q ss_pred cCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC--------CCCc
Q 041117 69 STVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND--------ITPL 140 (249)
Q Consensus 69 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~--------~~~~ 140 (249)
+.+.++-+|--+|+++-..+|.+++ .++.|+|+++|........+....... ..+.
T Consensus 97 ----------~lk~vIg~GvGAGAnIL~rfAl~~p------~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~ 160 (283)
T PF03096_consen 97 ----------GLKSVIGFGVGAGANILARFALKHP------ERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSS 160 (283)
T ss_dssp ----------T---EEEEEETHHHHHHHHHHHHSG------GGEEEEEEES---S---HHHHHHHHHH-------CTTS-
T ss_pred ----------CccEEEEEeeccchhhhhhccccCc------cceeEEEEEecCCCCccHHHHHHHHHhcccccccccccc
Confidence 4578999999999999999999954 589999999997755443322211100 0000
Q ss_pred --------------------------------cchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEec
Q 041117 141 --------------------------------VSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVG 188 (249)
Q Consensus 141 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g 188 (249)
..+.-...+++.|..+.. ...... ....|+|++.|
T Consensus 161 ~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~D------------L~~~~~-~~~c~vLlvvG 227 (283)
T PF03096_consen 161 VKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTD------------LSIERP-SLGCPVLLVVG 227 (283)
T ss_dssp HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------------SECT-TCCS-EEEEEE
T ss_pred hHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccc------------chhhcC-CCCCCeEEEEe
Confidence 001111122222211100 000111 12257999999
Q ss_pred CCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 189 GFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 189 ~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
+.-+..+...++..++.. .++++...+++|=......+ ..+.+.+.=||..
T Consensus 228 ~~Sp~~~~vv~~ns~Ldp--~~ttllkv~dcGglV~eEqP---~klaea~~lFlQG 278 (283)
T PF03096_consen 228 DNSPHVDDVVEMNSKLDP--TKTTLLKVADCGGLVLEEQP---GKLAEAFKLFLQG 278 (283)
T ss_dssp TTSTTHHHHHHHHHHS-C--CCEEEEEETT-TT-HHHH-H---HHHHHHHHHHHHH
T ss_pred cCCcchhhHHHHHhhcCc--ccceEEEecccCCcccccCc---HHHHHHHHHHHcc
Confidence 999999888888888863 47899999988653332222 6666666666653
No 169
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.04 E-value=1.7e-05 Score=59.04 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=19.4
Q ss_pred CCceEEEecchhHHHHHHHHHHhc
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
..+|.++|||+||.++-.+.....
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred cccceEEEecccHHHHHHHHHHhh
Confidence 468999999999999976666543
No 170
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.00 E-value=2.1e-05 Score=48.34 Aligned_cols=42 Identities=29% Similarity=0.319 Sum_probs=33.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENR 49 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 49 (249)
.+|+++||-+- .+..|..+++.|+++ ||.|+++|+|+.+.+.
T Consensus 17 ~~v~i~HG~~e-----h~~ry~~~a~~L~~~-G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 17 AVVVIVHGFGE-----HSGRYAHLAEFLAEQ-GYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEeCCcHH-----HHHHHHHHHHHHHhC-CCEEEEECCCcCCCCC
Confidence 58999999553 233489999999985 9999999999976654
No 171
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.98 E-value=0.0009 Score=50.88 Aligned_cols=208 Identities=13% Similarity=0.091 Sum_probs=121.7
Q ss_pred CCEEEEEecCccccCCCCccchh-----HHHHHHHHhCCcEEEeecCCCCCC-------CCCCCchhhHHHHHHHHHhhc
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYD-----DHCRRLAKEIPAVVISVNYRLAPE-------NRYPSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~-----~~~~~l~~~~g~~v~~~d~r~~~~-------~~~~~~~~d~~~~~~~l~~~~ 68 (249)
.|+||=.|.-|. .....+. +-+..+.+ .+.++-+|-+|... ...-..++++.+.+..+.+..
T Consensus 46 kpaiiTyhDlgl----N~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f 119 (326)
T KOG2931|consen 46 KPAIITYHDLGL----NHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF 119 (326)
T ss_pred CceEEEeccccc----chHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 478888898542 1111122 33455665 48888888776322 111224678888888888776
Q ss_pred cCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCCCcccccccC------------
Q 041117 69 STVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEERTQSEEDLND------------ 136 (249)
Q Consensus 69 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~------------ 136 (249)
..+.++-+|--+|+++-..+|..+ +.++-|+|++++........++......
T Consensus 120 ----------~lk~vIg~GvGAGAyIL~rFAl~h------p~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~ 183 (326)
T KOG2931|consen 120 ----------GLKSVIGMGVGAGAYILARFALNH------PERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQG 183 (326)
T ss_pred ----------CcceEEEecccccHHHHHHHHhcC------hhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhh
Confidence 457899999999999999999995 4589999999887655443322211110
Q ss_pred ----------------------------CCCccchhhHHHHHHhhCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEec
Q 041117 137 ----------------------------ITPLVSLRRSDWMWTAFLPEGTDRDYPAANTFGKHAVDISRVDIPATIVIVG 188 (249)
Q Consensus 137 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~g 188 (249)
......+.-...++..|..+..-... ....... -..|+|++.|
T Consensus 184 ~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~-----r~~~~~t----lkc~vllvvG 254 (326)
T KOG2931|consen 184 VKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIE-----RPKLGTT----LKCPVLLVVG 254 (326)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCcccc-----CCCcCcc----ccccEEEEec
Confidence 00000111112222222211100000 0000001 1256999999
Q ss_pred CCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 189 GFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 189 ~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
..-+.++...++..++.. ..+.+..+.++|-......+ ..+.+.+.=|+..
T Consensus 255 d~Sp~~~~vv~~n~~Ldp--~~ttllk~~d~g~l~~e~qP---~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 255 DNSPHVSAVVECNSKLDP--TYTTLLKMADCGGLVQEEQP---GKLAEAFKYFLQG 305 (326)
T ss_pred CCCchhhhhhhhhcccCc--ccceEEEEcccCCcccccCc---hHHHHHHHHHHcc
Confidence 999988877777777764 35788888888875443222 6777777777653
No 172
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.91 E-value=2.1e-05 Score=63.83 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=57.6
Q ss_pred chhHHHHHHHHhCCcE-----EEe-ecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHH
Q 041117 21 RYDDHCRRLAKEIPAV-----VIS-VNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNL 94 (249)
Q Consensus 21 ~~~~~~~~l~~~~g~~-----v~~-~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~ 94 (249)
.|..+++.|.+ .||. ..+ +|+|.++. ..++...-++.+.+... ....++++|+||||||.+
T Consensus 66 ~~~~li~~L~~-~GY~~~~~l~~~pYDWR~~~~-----~~~~~~~~lk~~ie~~~-------~~~~~kv~li~HSmGgl~ 132 (389)
T PF02450_consen 66 YFAKLIENLEK-LGYDRGKDLFAAPYDWRLSPA-----ERDEYFTKLKQLIEEAY-------KKNGKKVVLIAHSMGGLV 132 (389)
T ss_pred hHHHHHHHHHh-cCcccCCEEEEEeechhhchh-----hHHHHHHHHHHHHHHHH-------HhcCCcEEEEEeCCCchH
Confidence 37788999886 4764 223 68998776 22233333333333221 123689999999999999
Q ss_pred HHHHHHHhccccccccccccccccccCCC
Q 041117 95 AHNVAVRANECKFSKLKLIGVIPIQPFFG 123 (249)
Q Consensus 95 a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 123 (249)
+..+.............|+++|.+++...
T Consensus 133 ~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 133 ARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 99998876543222346888888876553
No 173
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.91 E-value=0.00012 Score=58.37 Aligned_cols=220 Identities=14% Similarity=0.153 Sum_probs=113.7
Q ss_pred EEEEEecCcccc-CCCCccchhHHHHHHHHhCCcEEEee----cCCCC----C--------------------CCCCCCc
Q 041117 3 VIVYFHGGGFVL-LAANSKRYDDHCRRLAKEIPAVVISV----NYRLA----P--------------------ENRYPSQ 53 (249)
Q Consensus 3 ~vv~~HGgg~~~-g~~~~~~~~~~~~~l~~~~g~~v~~~----d~r~~----~--------------------~~~~~~~ 53 (249)
.+|++-||.-.. ...........+..+|...|.+|+.+ |.++. + +..++..
T Consensus 66 all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW~~fl~~~d~~w~l~ 145 (367)
T PF10142_consen 66 ALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTWRKFLETGDPEWPLH 145 (367)
T ss_pred EEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHHHHHhccCCccchhh
Confidence 578888876111 11122234678899999989888765 32321 1 0111111
Q ss_pred ---hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcccccccccccccccc-ccCCCCCCCCc
Q 041117 54 ---YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPI-QPFFGGEERTQ 129 (249)
Q Consensus 54 ---~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~-~p~~~~~~~~~ 129 (249)
..-+..+++.+.+... ...+.+.++++|.|.|=-|+.+...|.. .++|++++-+ .++++......
T Consensus 146 ~PMtka~vrAMD~vq~~~~----~~~~~~i~~FvV~GaSKRGWTtWltaa~-------D~RV~aivP~Vid~LN~~~~l~ 214 (367)
T PF10142_consen 146 LPMTKAAVRAMDAVQEFLK----KKFGVNIEKFVVTGASKRGWTTWLTAAV-------DPRVKAIVPIVIDVLNMKANLE 214 (367)
T ss_pred hhHHHHHHHHHHHHHHHHH----hhcCCCccEEEEeCCchHhHHHHHhhcc-------CcceeEEeeEEEccCCcHHHHH
Confidence 2233344444444432 0135678999999999999999999983 3477777643 12222222111
Q ss_pred ccccccCCCCccchhhHHHHHHhhCCCCC-C-CCCCCCCCCCCCccccccCCCCcEEEEecCCCcch-hh-HHHHHHHHH
Q 041117 130 SEEDLNDITPLVSLRRSDWMWTAFLPEGT-D-RDYPAANTFGKHAVDISRVDIPATIVIVGGFDPLK-DW-QKRHYQGLK 205 (249)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~pP~li~~g~~D~~~-~~-~~~~~~~l~ 205 (249)
...+.- +..++. ....++..-+.... . .-........|.. ...+.. -|-+|+.|+.|++. |+ +.-+...|+
T Consensus 215 h~y~~y--G~~ws~-a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~-Y~~rL~-~PK~ii~atgDeFf~pD~~~~y~d~L~ 289 (367)
T PF10142_consen 215 HQYRSY--GGNWSF-AFQDYYNEGITQQLDTPEFDKLMQIVDPYS-YRDRLT-MPKYIINATGDEFFVPDSSNFYYDKLP 289 (367)
T ss_pred HHHHHh--CCCCcc-chhhhhHhCchhhcCCHHHHHHHHhcCHHH-HHHhcC-ccEEEEecCCCceeccCchHHHHhhCC
Confidence 111100 000010 01111110000000 0 0000001111111 112223 35899999999765 43 466667776
Q ss_pred HCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 206 RHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 206 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
| +..++.+|+++|.... ....+.+..|+...+.
T Consensus 290 --G-~K~lr~vPN~~H~~~~------~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 290 --G-EKYLRYVPNAGHSLIG------SDVVQSLRAFYNRIQN 322 (367)
T ss_pred --C-CeeEEeCCCCCcccch------HHHHHHHHHHHHHHHc
Confidence 3 7789999999997553 5788888888887543
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.87 E-value=5.5e-05 Score=62.59 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=64.3
Q ss_pred CEEEEEecCccccCCCCcc-chhHHHHHHHHhCCcEEEeecCCCCCCCC--------------CCCchhhHHHHHHHHHh
Q 041117 2 PVIVYFHGGGFVLLAANSK-RYDDHCRRLAKEIPAVVISVNYRLAPENR--------------YPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~-~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------------~~~~~~d~~~~~~~l~~ 66 (249)
|++|++=|-|- .... ....++..||++.|..++++++|-.++.. ....+.|+..+++++..
T Consensus 30 pifl~~ggE~~----~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 30 PIFLYIGGEGP----IEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp EEEEEE--SS-----HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCc----cchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 67777755332 1111 12347788999999999999999755432 12237788888888885
Q ss_pred hccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 67 KISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
... ..+..|++++|.|.||.+|+.+-.++++ .+.|.+..|+.+
T Consensus 106 ~~~-------~~~~~pwI~~GgSY~G~Laaw~r~kyP~------~~~ga~ASSapv 148 (434)
T PF05577_consen 106 KYN-------TAPNSPWIVFGGSYGGALAAWFRLKYPH------LFDGAWASSAPV 148 (434)
T ss_dssp HTT-------TGCC--EEEEEETHHHHHHHHHHHH-TT------T-SEEEEET--C
T ss_pred hhc-------CCCCCCEEEECCcchhHHHHHHHhhCCC------eeEEEEecccee
Confidence 542 1245699999999999999999999654 566666665544
No 175
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.80 E-value=0.0047 Score=50.89 Aligned_cols=72 Identities=15% Similarity=0.114 Sum_probs=45.1
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhc
Q 041117 24 DHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
+..-.| +.|..|+.+.+.-.| ....+++|+..+.....+... ..--+..+.+|+|...||+.++++|+..+
T Consensus 92 evG~AL--~~GHPvYFV~F~p~P--~pgQTl~DV~~ae~~Fv~~V~-----~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVAL--RAGHPVYFVGFFPEP--EPGQTLEDVMRAEAAFVEEVA-----ERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHH--HcCCCeEEEEecCCC--CCCCcHHHHHHHHHHHHHHHH-----HhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 344444 348777777664333 223567777776544433332 11123348999999999999999999865
Q ss_pred c
Q 041117 104 E 104 (249)
Q Consensus 104 ~ 104 (249)
+
T Consensus 163 d 163 (581)
T PF11339_consen 163 D 163 (581)
T ss_pred C
Confidence 4
No 176
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.78 E-value=0.0002 Score=55.92 Aligned_cols=110 Identities=15% Similarity=0.104 Sum_probs=64.4
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCc--EEEeecCCCCCC---CC-----CCCchhhHHHHHHHHHhhccCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPA--VVISVNYRLAPE---NR-----YPSQYDDGIDVLKFIDTKISTV 71 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~--~v~~~d~r~~~~---~~-----~~~~~~d~~~~~~~l~~~~~~~ 71 (249)
-++||+||-.+.+- . -..-..+++...|+ ..+.+.++-... +. ....-.++...+++|.+..
T Consensus 117 ~vlvFvHGfNntf~---d--av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~--- 188 (377)
T COG4782 117 TVLVFVHGFNNTFE---D--AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK--- 188 (377)
T ss_pred eEEEEEcccCCchh---H--HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC---
Confidence 37999999443210 1 12223444444454 344444442111 11 1122345555666666554
Q ss_pred CCCCCccCCCceEEEecchhHHHHHHHHHHhccccc--cccccccccccccCCCCCC
Q 041117 72 EDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKF--SKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 72 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~~~ 126 (249)
..++|+|++||||.++++....+..-++. .+..++-+|+.+|=.|.+.
T Consensus 189 -------~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 189 -------PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred -------CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 45789999999999999999887653322 2346888999888666543
No 177
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.70 E-value=0.00017 Score=59.91 Aligned_cols=52 Identities=23% Similarity=0.206 Sum_probs=38.9
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccc----cccccccccccccCCCCCCCCc
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKF----SKLKLIGVIPIQPFFGGEERTQ 129 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~----~~~~~~~~i~~~p~~~~~~~~~ 129 (249)
....+++|+|+|+||..+..+|.+..+... ....++|+++-+|+++......
T Consensus 168 ~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~ 223 (462)
T PTZ00472 168 LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYA 223 (462)
T ss_pred ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhhcc
Confidence 355899999999999999999887642211 2347899999999987755443
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.69 E-value=0.00014 Score=62.06 Aligned_cols=65 Identities=15% Similarity=0.119 Sum_probs=42.7
Q ss_pred cEEEeecCCCC----CCCCCCCchhhHHHHHHHHHhhccCCCCCCCc-cCCCceEEEecchhHHHHHHHHHH
Q 041117 35 AVVISVNYRLA----PENRYPSQYDDGIDVLKFIDTKISTVEDFPAC-ADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 35 ~~v~~~d~r~~----~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~-~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
+..+++|+... -+....++.|-+.++++++.+.... +.++. -.+..|+|+||||||.+|...+..
T Consensus 133 ~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr~--~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 133 FDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYRG--EREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred cceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhhc--ccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 45666665431 2234456678888899998877641 00111 125669999999999999888764
No 179
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.00048 Score=49.76 Aligned_cols=100 Identities=21% Similarity=0.217 Sum_probs=62.2
Q ss_pred EEEEEecCccccCCC-----------CccchhHHHHHHHHhCCcEEEeecCCC---------CCCCCCCCchhhHHHHHH
Q 041117 3 VIVYFHGGGFVLLAA-----------NSKRYDDHCRRLAKEIPAVVISVNYRL---------APENRYPSQYDDGIDVLK 62 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~-----------~~~~~~~~~~~l~~~~g~~v~~~d~r~---------~~~~~~~~~~~d~~~~~~ 62 (249)
++|+|||.|.+.... +...--+++++-.+ .||-|++.+-.. .|.....+.++.+...+.
T Consensus 103 LlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~-~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~ 181 (297)
T KOG3967|consen 103 LLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVA-EGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWK 181 (297)
T ss_pred eEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHH-cCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHH
Confidence 689999988642110 01111234555555 388888876431 122233455666666666
Q ss_pred HHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccc
Q 041117 63 FIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIP 117 (249)
Q Consensus 63 ~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 117 (249)
.+.... .+..++++.||.||.+.+.+..+++.. .++.++.+
T Consensus 182 ~~v~pa----------~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aial 222 (297)
T KOG3967|consen 182 NIVLPA----------KAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIAL 222 (297)
T ss_pred HHhccc----------CcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEe
Confidence 665543 578899999999999999999987642 24544443
No 180
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.60 E-value=0.00085 Score=53.24 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=53.4
Q ss_pred EEEEec-CccccCCCCccchhHHHHHHHHhCCcEEEeecC-CCC-CCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCC
Q 041117 4 IVYFHG-GGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY-RLA-PENRYPSQYDDGIDVLKFIDTKISTVEDFPACADL 80 (249)
Q Consensus 4 vv~~HG-gg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~-r~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 80 (249)
-||+-| |||. +. -.+....|.++ |+.|+.+|- |.. .+...+....|+...+++-... .+.
T Consensus 263 av~~SGDGGWr----~l--Dk~v~~~l~~~-gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~----------w~~ 325 (456)
T COG3946 263 AVFYSGDGGWR----DL--DKEVAEALQKQ-GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR----------WGA 325 (456)
T ss_pred EEEEecCCchh----hh--hHHHHHHHHHC-CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh----------hCc
Confidence 467777 7762 22 25667777775 999999984 221 1222233455666666665544 366
Q ss_pred CceEEEecchhHHHHHHHHHHhc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
.++.|+|+|.|+=+--..-.+.+
T Consensus 326 ~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 326 KRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred ceEEEEeecccchhhHHHHHhCC
Confidence 89999999999987666555543
No 181
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.54 E-value=0.0062 Score=49.82 Aligned_cols=104 Identities=19% Similarity=0.190 Sum_probs=63.6
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEee-cCCCCCCCCCCCchhhHHHHH-HHHHhhccCCCCCCCccC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISV-NYRLAPENRYPSQYDDGIDVL-KFIDTKISTVEDFPACAD 79 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~-d~r~~~~~~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~~ 79 (249)
|+.||+-|- +.-..+. .-.+.++.|+..+.+ |-|+-++.-+ ...++....+ +-+.+.+. .++.+
T Consensus 290 PL~VYFSGy------R~aEGFE--gy~MMk~Lg~PfLL~~DpRleGGaFY-lGs~eyE~~I~~~I~~~L~-----~LgF~ 355 (511)
T TIGR03712 290 PLNVYFSGY------RPAEGFE--GYFMMKRLGAPFLLIGDPRLEGGAFY-LGSDEYEQGIINVIQEKLD-----YLGFD 355 (511)
T ss_pred CeEEeeccC------cccCcch--hHHHHHhcCCCeEEeeccccccceee-eCcHHHHHHHHHHHHHHHH-----HhCCC
Confidence 677888771 1111122 122445667776665 5665544332 2223333322 22233332 34588
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEER 127 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 127 (249)
.+.++|-|-|||-.-|+.+++++ .+.++|+--|.++.-+.
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLGti 395 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLGTI 395 (511)
T ss_pred HHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchhhh
Confidence 99999999999999999999875 78889988888766443
No 182
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.44 E-value=0.0012 Score=48.21 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=46.4
Q ss_pred CcEEEeecCCCCCCC------------CCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 34 PAVVISVNYRLAPEN------------RYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 34 g~~v~~~d~r~~~~~------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
-+.|++|-||-..-. .......|+.++.++-.+... +..+++|+|||.|+.+...+..+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n---------~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN---------NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC---------CCCCEEEEEeChHHHHHHHHHHH
Confidence 478999999853211 133457899999998877763 55799999999999999999887
Q ss_pred h
Q 041117 102 A 102 (249)
Q Consensus 102 ~ 102 (249)
.
T Consensus 116 ~ 116 (207)
T PF11288_consen 116 E 116 (207)
T ss_pred H
Confidence 5
No 183
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.44 E-value=0.00081 Score=43.69 Aligned_cols=60 Identities=20% Similarity=0.294 Sum_probs=42.8
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
.+|+|++.++.|+..| .+.++++.+.-.+..++..++.||+...... .-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP--~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s---~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTP--YEGARAMAARLPGSRLVTVDGAGHGVYAGGS---PCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCc--HHHHHHHHHHCCCceEEEEeccCcceecCCC---hHHHHHHHHHHHc
Confidence 3789999999999997 3333344333335789999999998774322 5667777788764
No 184
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.43 E-value=0.00045 Score=55.05 Aligned_cols=99 Identities=16% Similarity=0.072 Sum_probs=56.9
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcE---EEeecCCCC-CCCCCCCchhhHHHHHHHHHhhccCCCCCCCcc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAV---VISVNYRLA-PENRYPSQYDDGIDVLKFIDTKISTVEDFPACA 78 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 78 (249)
.++++||++.. . ..+..+...+.. .|+. +..+++... ...+.....+.+...++.+... .
T Consensus 61 pivlVhG~~~~---~--~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~----------~ 124 (336)
T COG1075 61 PIVLVHGLGGG---Y--GNFLPLDYRLAI-LGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAK----------T 124 (336)
T ss_pred eEEEEccCcCC---c--chhhhhhhhhcc-hHHHhcccccccccccCCCccccccHHHHHHHHHHHHhh----------c
Confidence 68999996431 1 114444444444 3665 666666533 1111222233333334333332 2
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPF 121 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 121 (249)
+..++.++||||||.+...++...... ..++.++.+++.
T Consensus 125 ga~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~tp 163 (336)
T COG1075 125 GAKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGTP 163 (336)
T ss_pred CCCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEeccC
Confidence 458999999999999999888775422 357777776554
No 185
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.39 E-value=0.00043 Score=53.76 Aligned_cols=74 Identities=18% Similarity=0.067 Sum_probs=55.4
Q ss_pred CCcEEEeecCCCCC---CCCCCCchh-hHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcccccc
Q 041117 33 IPAVVISVNYRLAP---ENRYPSQYD-DGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFS 108 (249)
Q Consensus 33 ~g~~v~~~d~r~~~---~~~~~~~~~-d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 108 (249)
.||.|+..++++.. +.+++.... .+...+++.++.+ +...+.|+|.|+|.||.-++.+|..++
T Consensus 267 lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L--------gf~~edIilygWSIGGF~~~waAs~YP----- 333 (517)
T KOG1553|consen 267 LGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL--------GFRQEDIILYGWSIGGFPVAWAASNYP----- 333 (517)
T ss_pred hCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc--------CCCccceEEEEeecCCchHHHHhhcCC-----
Confidence 59999999998743 344554433 3344567777665 378899999999999999999999875
Q ss_pred ccccccccccccC
Q 041117 109 KLKLIGVIPIQPF 121 (249)
Q Consensus 109 ~~~~~~~i~~~p~ 121 (249)
.++++|+-+.+
T Consensus 334 --dVkavvLDAtF 344 (517)
T KOG1553|consen 334 --DVKAVVLDATF 344 (517)
T ss_pred --CceEEEeecch
Confidence 58888886543
No 186
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.38 E-value=0.0014 Score=48.25 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=52.9
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCCCCC-CCCCchhhHHHHH-HHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHH
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLAPEN-RYPSQYDDGIDVL-KFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a 99 (249)
|..+...+.. .+.++.++.++.... .....+++..+.+ ..+.+. ....+++++|||+||.++...+
T Consensus 15 ~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~l~g~s~Gg~~a~~~a 82 (212)
T smart00824 15 YARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA----------AGGRPFVLVGHSSGGLLAHAVA 82 (212)
T ss_pred HHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh----------cCCCCeEEEEECHHHHHHHHHH
Confidence 6777777764 578888888765322 2233344433322 223322 1346799999999999999999
Q ss_pred HHhcccccccccccccccccc
Q 041117 100 VRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~p 120 (249)
.+....+ ..+.+++++.+
T Consensus 83 ~~l~~~~---~~~~~l~~~~~ 100 (212)
T smart00824 83 ARLEARG---IPPAAVVLLDT 100 (212)
T ss_pred HHHHhCC---CCCcEEEEEcc
Confidence 8865432 25677766543
No 187
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.32 E-value=0.00074 Score=46.52 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=22.7
Q ss_pred CCceEEEecchhHHHHHHHHHHhccc
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANEC 105 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~ 105 (249)
..++.+.|||+||.+|..++......
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~ 88 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASH 88 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHC
T ss_pred CccchhhccchHHHHHHHHHHhhhhc
Confidence 47899999999999999999987543
No 188
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.32 E-value=0.0024 Score=48.00 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=65.8
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC-CCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP-ENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
.+|.+||-| .+.++.....+.+.+.+..|..|.+++.--.- ...+....+++..+.+.+..-.+ -++
T Consensus 25 P~ii~HGig---d~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~---------lsq 92 (296)
T KOG2541|consen 25 PVIVWHGIG---DSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPE---------LSQ 92 (296)
T ss_pred CEEEEeccC---cccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchh---------ccC
Confidence 468899944 23333446777777777678899888864332 22334445566666666653332 346
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccc
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ 119 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 119 (249)
-+.++|.|.||.++-.++..-.+ ++++..|.++
T Consensus 93 Gynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~ 125 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLG 125 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCC-----CCcceeEecc
Confidence 69999999999999998887532 4667777664
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.22 E-value=0.0011 Score=46.55 Aligned_cols=26 Identities=27% Similarity=0.284 Sum_probs=23.0
Q ss_pred CCCceEEEecchhHHHHHHHHHHhcc
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
+..+++++|||+||.+|..++.....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 56799999999999999999988754
No 190
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.21 E-value=0.00065 Score=56.89 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=55.3
Q ss_pred hhHHHHHHHHhCCcE-----EEeecCCCCCCCCC--CCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHH
Q 041117 22 YDDHCRRLAKEIPAV-----VISVNYRLAPENRY--PSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNL 94 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~-----v~~~d~r~~~~~~~--~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~ 94 (249)
|..+++.|++ .||. ...+|+|+++.... ...+..+...++.+.+.- +.++++|+||||||.+
T Consensus 158 w~kLIe~L~~-iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n----------ggkKVVLV~HSMGglv 226 (642)
T PLN02517 158 WAVLIANLAR-IGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN----------GGKKVVVVPHSMGVLY 226 (642)
T ss_pred HHHHHHHHHH-cCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc----------CCCeEEEEEeCCchHH
Confidence 4788899987 4875 33457777643221 122233333444333221 3579999999999999
Q ss_pred HHHHHHHhcc---------ccccccccccccccccCCCC
Q 041117 95 AHNVAVRANE---------CKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 95 a~~~a~~~~~---------~~~~~~~~~~~i~~~p~~~~ 124 (249)
++.+...... ..+....|++.|.++|.+..
T Consensus 227 ~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 227 FLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9998764321 11123457888888776533
No 191
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.19 E-value=0.0042 Score=48.06 Aligned_cols=102 Identities=9% Similarity=0.045 Sum_probs=60.0
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-CCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-PSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
.+|+.||-|=.. +......+.+.+.+..|..+..+......+.++ ....+++..+++.+..... + .+
T Consensus 27 P~ViwHG~GD~c---~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~~--------l-~~ 94 (314)
T PLN02633 27 PFIMLHGIGTQC---SDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMKE--------L-SQ 94 (314)
T ss_pred CeEEecCCCccc---CCchHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhchh--------h-hC
Confidence 468889955222 222344555555333356555554322233333 3334566666666655321 1 24
Q ss_pred ceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
-+.++|+|.||.++-.++.+.++ .++++.+|.+++
T Consensus 95 G~naIGfSQGGlflRa~ierc~~----~p~V~nlISlgg 129 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDG----GPPVYNYISLAG 129 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCC----CCCcceEEEecC
Confidence 59999999999999999998643 136777777754
No 192
>PLN02606 palmitoyl-protein thioesterase
Probab=97.18 E-value=0.0038 Score=48.24 Aligned_cols=103 Identities=12% Similarity=0.048 Sum_probs=59.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCC-CCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRY-PSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
.||++||-|=. ........+.+.+.+..|.-+..+..-...+.++ ....+++..+++.+..... + .+
T Consensus 28 PvViwHGlgD~---~~~~~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~~~~--------L-~~ 95 (306)
T PLN02606 28 PFVLFHGFGGE---CSNGKVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQMKE--------L-SE 95 (306)
T ss_pred CEEEECCCCcc---cCCchHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhcchh--------h-cC
Confidence 47889995521 1222345555555322254333332111111233 4455677777777765332 1 24
Q ss_pred ceEEEecchhHHHHHHHHHHhccccccccccccccccccC
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPF 121 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 121 (249)
-+.++|+|.||.++-.++.+.+. .++++-+|.+++.
T Consensus 96 G~naIGfSQGglflRa~ierc~~----~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDN----APPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCC----CCCcceEEEecCC
Confidence 59999999999999999998643 1367777777543
No 193
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.17 E-value=0.00077 Score=50.31 Aligned_cols=56 Identities=20% Similarity=0.298 Sum_probs=37.3
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ 119 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 119 (249)
......|++++.+... -...++.+.|||.||++|...+....+. ...+|..+..+.
T Consensus 65 ~~~q~~A~~yl~~~~~--------~~~~~i~v~GHSkGGnLA~yaa~~~~~~--~~~rI~~vy~fD 120 (224)
T PF11187_consen 65 TPQQKSALAYLKKIAK--------KYPGKIYVTGHSKGGNLAQYAAANCDDE--IQDRISKVYSFD 120 (224)
T ss_pred CHHHHHHHHHHHHHHH--------hCCCCEEEEEechhhHHHHHHHHHccHH--HhhheeEEEEee
Confidence 3444566777766543 1234699999999999999999874322 123677776553
No 194
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.10 E-value=0.0013 Score=52.46 Aligned_cols=89 Identities=22% Similarity=0.244 Sum_probs=61.7
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCCCC-----------------CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEE
Q 041117 24 DHCRRLAKEIPAVVISVNYRLAPENR-----------------YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVA 86 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~~~~~-----------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~ 86 (249)
.++-.+|.+.+..++-+++|-.++.. .++.+.|....+..|++... ....+|+.+
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~--------a~~~pvIaf 172 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS--------AEASPVIAF 172 (492)
T ss_pred chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc--------cccCcEEEe
Confidence 45677788888899999998654321 12346677777777776643 456799999
Q ss_pred ecchhHHHHHHHHHHhccccccccccccccccccCCCCC
Q 041117 87 GDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 87 G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
|.|.||++|..+=.+++. ....++...+|++..+
T Consensus 173 GGSYGGMLaAWfRlKYPH-----iv~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 173 GGSYGGMLAAWFRLKYPH-----IVLGALAASAPVLYFE 206 (492)
T ss_pred cCchhhHHHHHHHhcChh-----hhhhhhhccCceEeec
Confidence 999999999999988643 1334445556765443
No 195
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.05 E-value=0.004 Score=51.31 Aligned_cols=47 Identities=19% Similarity=0.245 Sum_probs=35.9
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccc----cccccccccccccCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKF----SKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~----~~~~~~~~i~~~p~~~~ 124 (249)
....+++|.|.|.||..+-.+|.+..+... ....++|+++-+|+++.
T Consensus 133 ~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 133 YRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp GTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred ccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 455689999999999999888887654332 24679999999998755
No 196
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.02 E-value=0.0019 Score=48.62 Aligned_cols=43 Identities=23% Similarity=0.122 Sum_probs=30.3
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+..++++.|||+||.+|..++....... ....+.++..-+|.+
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 4568999999999999999998765321 123466555555544
No 197
>PLN02454 triacylglycerol lipase
Probab=96.90 E-value=0.0029 Score=51.05 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=27.6
Q ss_pred ceEEEecchhHHHHHHHHHHhcccccc--ccccccccccccCC
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANECKFS--KLKLIGVIPIQPFF 122 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~~~~~--~~~~~~~i~~~p~~ 122 (249)
+|++.|||+||.+|+..|......+.. ...+..+..-+|-+
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 499999999999999999876443221 12344555555544
No 198
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.53 E-value=0.0034 Score=50.99 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=44.9
Q ss_pred hhHHHHHHHHhCCcE------EEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCcc-CCCceEEEecchhHHH
Q 041117 22 YDDHCRRLAKEIPAV------VISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACA-DLKRCFVAGDSAGGNL 94 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~------v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~-~~~~i~l~G~S~GG~~ 94 (249)
|..+++.++. .||. -..+|+|++.... +.....+..|+...++ .+.. +.+|++|++|||||.+
T Consensus 126 w~~~i~~lv~-~GYe~~~~l~ga~YDwRls~~~~-----e~rd~yl~kLK~~iE~----~~~~~G~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 126 WHELIENLVG-IGYERGKTLFGAPYDWRLSYHNS-----EERDQYLSKLKKKIET----MYKLNGGKKVVLISHSMGGLY 195 (473)
T ss_pred HHHHHHHHHh-hCcccCceeeccccchhhccCCh-----hHHHHHHHHHHHHHHH----HHHHcCCCceEEEecCCccHH
Confidence 5677888776 3765 3346888865222 2222333333322220 1122 3489999999999999
Q ss_pred HHHHHHHhcc
Q 041117 95 AHNVAVRANE 104 (249)
Q Consensus 95 a~~~a~~~~~ 104 (249)
.+.+.....+
T Consensus 196 ~lyFl~w~~~ 205 (473)
T KOG2369|consen 196 VLYFLKWVEA 205 (473)
T ss_pred HHHHHhcccc
Confidence 9999987765
No 199
>PLN02408 phospholipase A1
Probab=96.50 E-value=0.0084 Score=47.82 Aligned_cols=24 Identities=25% Similarity=0.231 Sum_probs=20.9
Q ss_pred CceEEEecchhHHHHHHHHHHhcc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
.+|.+.|||+||.+|...|.....
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 369999999999999999987654
No 200
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.33 E-value=0.0066 Score=46.50 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=26.0
Q ss_pred CceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
+-+.++|+|.||.++-.++.+.+. ++++-+|.+++
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlgg 114 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGG 114 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES-
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecC
Confidence 469999999999999999998743 36777777754
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.32 E-value=0.014 Score=42.10 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=49.8
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCC---cEEEeecCCCCCCC-CCCCc----hhhHHHHHHHHHhhccCCCCCC
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIP---AVVISVNYRLAPEN-RYPSQ----YDDGIDVLKFIDTKISTVEDFP 75 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g---~~v~~~d~r~~~~~-~~~~~----~~d~~~~~~~l~~~~~~~~~~~ 75 (249)
||+..|.+-..|.... -..+...+.+..| +.+..++|+-.... .+... ..++...++.....
T Consensus 8 vi~aRGT~E~~g~~~~--g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~-------- 77 (179)
T PF01083_consen 8 VIFARGTGEPPGVGRV--GPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAAR-------- 77 (179)
T ss_dssp EEEE--TTSSTTTCCC--HHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred EEEecCCCCCCCCccc--cHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHh--------
Confidence 5566664432222111 2344455555555 44555678754332 12222 22333333333222
Q ss_pred CccCCCceEEEecchhHHHHHHHHHH--hccccccccccccccccc
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVR--ANECKFSKLKLIGVIPIQ 119 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~~~~~~~i~~~ 119 (249)
-+..+++|.|+|.|+.++..++.. .... ...+|.+++++.
T Consensus 78 --CP~~kivl~GYSQGA~V~~~~~~~~~l~~~--~~~~I~avvlfG 119 (179)
T PF01083_consen 78 --CPNTKIVLAGYSQGAMVVGDALSGDGLPPD--VADRIAAVVLFG 119 (179)
T ss_dssp --STTSEEEEEEETHHHHHHHHHHHHTTSSHH--HHHHEEEEEEES
T ss_pred --CCCCCEEEEecccccHHHHHHHHhccCChh--hhhhEEEEEEec
Confidence 245799999999999999999876 1110 224677877763
No 202
>PLN02571 triacylglycerol lipase
Probab=96.26 E-value=0.013 Score=47.51 Aligned_cols=23 Identities=30% Similarity=0.267 Sum_probs=20.4
Q ss_pred ceEEEecchhHHHHHHHHHHhcc
Q 041117 82 RCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
+|++.|||+||.+|+..|.....
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~ 249 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVA 249 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHH
Confidence 69999999999999999987643
No 203
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.26 E-value=0.012 Score=45.77 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=46.1
Q ss_pred CcEEEEecCCCcchhh--HHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhh
Q 041117 181 PATIVIVGGFDPLKDW--QKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQS 246 (249)
Q Consensus 181 pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~ 246 (249)
.|+|++||..|..++. +..+.+..+.. +.+...+++++|..... ..+. .+.++++.+|+.+++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYD-NPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccC-ccHHHHHHHHHHHHHHHHhc
Confidence 4799999999999973 34454555433 67888899999975532 2222 589999999999875
No 204
>PLN02209 serine carboxypeptidase
Probab=96.24 E-value=0.018 Score=47.67 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcccc----ccccccccccccccCCCCCC
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECK----FSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 126 (249)
+++.+.+.+|+..... -......+++|+|.|.||.-+-.+|....+.. .....++|+++.+|+++...
T Consensus 145 ~~a~~~~~fl~~f~~~----~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~ 216 (437)
T PLN02209 145 SEVKKIHEFLQKWLIK----HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEF 216 (437)
T ss_pred HHHHHHHHHHHHHHHh----CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhh
Confidence 4455555555554431 11134468999999999998888887654321 12347899999999887644
No 205
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.20 E-value=0.029 Score=46.34 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=39.6
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhcccc----ccccccccccccccCCCCCCCCc
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECK----FSKLKLIGVIPIQPFFGGEERTQ 129 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~~~~ 129 (249)
....+++|.|.|.+|+..-++|...-+.. .....++|+++=+|+++......
T Consensus 165 y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~ 220 (454)
T KOG1282|consen 165 YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYN 220 (454)
T ss_pred hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcccccc
Confidence 45678999999999999988888764432 13457899999999987765433
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.18 E-value=0.018 Score=47.53 Aligned_cols=48 Identities=17% Similarity=0.139 Sum_probs=36.4
Q ss_pred CCCceEEEecchhHHHHHHHHHHhcccc----ccccccccccccccCCCCCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECK----FSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 126 (249)
...+++|.|.|.||..+-.+|....+.. ..+..++|+++-+|+++...
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~ 214 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 214 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchh
Confidence 4568999999999998888887654321 12357899999999886654
No 207
>PLN02802 triacylglycerol lipase
Probab=96.14 E-value=0.016 Score=47.92 Aligned_cols=25 Identities=36% Similarity=0.373 Sum_probs=21.3
Q ss_pred CceEEEecchhHHHHHHHHHHhccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANEC 105 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~ 105 (249)
-+|.|.|||+||.+|...|......
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 3799999999999999999876543
No 208
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.89 E-value=0.13 Score=42.48 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=63.3
Q ss_pred CEEEEEecCccccCCCCc-cchhHHHHHHHHhCCcEEEeecCCCCCCCC--------------CCCchhhHHHHHHHHHh
Q 041117 2 PVIVYFHGGGFVLLAANS-KRYDDHCRRLAKEIPAVVISVNYRLAPENR--------------YPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------------~~~~~~d~~~~~~~l~~ 66 (249)
|+.|+|=|-|-.. ..+ ..-......+|++.|..|+.+++|-.++.. ....+.|+.++++.+..
T Consensus 87 PiFLmIGGEgp~~--~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 87 PIFLMIGGEGPES--DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred ceEEEEcCCCCCC--CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 6777777754321 111 111335677888899999999999654321 12236788888888776
Q ss_pred hccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcc
Q 041117 67 KISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
+.. . .+..+.+.+|-|.-|.+++..=.++++
T Consensus 165 k~n------~-~~~~~WitFGgSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 165 KFN------F-SDDSKWITFGGSYSGSLSAWFREKYPE 195 (514)
T ss_pred hcC------C-CCCCCeEEECCCchhHHHHHHHHhCch
Confidence 653 0 233599999999999999999888754
No 209
>PLN00413 triacylglycerol lipase
Probab=95.87 E-value=0.017 Score=47.52 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=20.5
Q ss_pred CCCceEEEecchhHHHHHHHHHHh
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+..++++.|||+||.+|...+...
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHH
Confidence 456899999999999999988653
No 210
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.82 E-value=0.048 Score=40.24 Aligned_cols=35 Identities=17% Similarity=0.068 Sum_probs=25.0
Q ss_pred CCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
-++|.|+++|||-++|..+.... +++..+.+++..
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~~--------~~~~aiAINGT~ 90 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQGI--------PFKRAIAINGTP 90 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhccC--------CcceeEEEECCC
Confidence 37899999999999987765431 456666665543
No 211
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.71 E-value=0.035 Score=46.20 Aligned_cols=23 Identities=35% Similarity=0.322 Sum_probs=20.1
Q ss_pred CceEEEecchhHHHHHHHHHHhc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
-+|.|.|||+||.+|+..|....
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHH
Confidence 47999999999999999997654
No 212
>PLN02162 triacylglycerol lipase
Probab=95.60 E-value=0.024 Score=46.49 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=20.1
Q ss_pred CCCceEEEecchhHHHHHHHHHHh
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+..++++.|||+||.+|...|...
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHH
Confidence 346899999999999999987643
No 213
>PF03283 PAE: Pectinacetylesterase
Probab=95.59 E-value=0.029 Score=45.21 Aligned_cols=42 Identities=26% Similarity=0.194 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHhh-ccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcc
Q 041117 54 YDDGIDVLKFIDTK-ISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 54 ~~d~~~~~~~l~~~-~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
..-+.+++++|.+. .. ++++++|.|.|+||.-++..+-...+
T Consensus 137 ~~i~~avl~~l~~~gl~---------~a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLP---------NAKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred HHHHHHHHHHHHHhcCc---------ccceEEEeccChHHHHHHHHHHHHHH
Confidence 45677788888877 42 67899999999999998888776543
No 214
>PLN02934 triacylglycerol lipase
Probab=95.52 E-value=0.025 Score=46.89 Aligned_cols=24 Identities=29% Similarity=0.313 Sum_probs=20.5
Q ss_pred CCCceEEEecchhHHHHHHHHHHh
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+..++++.|||+||.+|...+...
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHH
Confidence 446899999999999999998653
No 215
>PLN02753 triacylglycerol lipase
Probab=95.47 E-value=0.05 Score=45.38 Aligned_cols=25 Identities=36% Similarity=0.255 Sum_probs=21.4
Q ss_pred CCceEEEecchhHHHHHHHHHHhcc
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
.-+|.+.|||+||.+|+..|.....
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHH
Confidence 3589999999999999999986643
No 216
>PLN02310 triacylglycerol lipase
Probab=95.45 E-value=0.047 Score=44.25 Aligned_cols=23 Identities=39% Similarity=0.326 Sum_probs=20.1
Q ss_pred CceEEEecchhHHHHHHHHHHhc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
-+|.|.|||+||.+|+..|....
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH
Confidence 47999999999999999997653
No 217
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.062 Score=40.63 Aligned_cols=61 Identities=10% Similarity=-0.059 Sum_probs=38.8
Q ss_pred EEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhcC
Q 041117 183 TIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSAK 248 (249)
Q Consensus 183 ~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~~ 248 (249)
+.++.+++|..++. .=...+++.=..++++..+ +||...+.-.. +.+-++|.+-|++.-++
T Consensus 309 ~ivv~A~~D~Yipr--~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~--dlfRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPR--TGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQ--DLFRRAIVDGLDRLDKE 369 (371)
T ss_pred EEEEEecCCccccc--cCcHHHHHhCCCCEEEEee-cCceeeeehhc--hHHHHHHHHHHHhhhhc
Confidence 67788999988873 2223334433367777777 59975554333 67777888877765544
No 218
>PLN02324 triacylglycerol lipase
Probab=95.38 E-value=0.038 Score=44.85 Aligned_cols=22 Identities=18% Similarity=0.105 Sum_probs=19.7
Q ss_pred ceEEEecchhHHHHHHHHHHhc
Q 041117 82 RCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
+|.+.|||+||.+|+..|....
T Consensus 216 sItvTGHSLGGALAtLaA~dl~ 237 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADLV 237 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHHH
Confidence 6999999999999999998653
No 219
>PLN02761 lipase class 3 family protein
Probab=94.97 E-value=0.077 Score=44.27 Aligned_cols=23 Identities=30% Similarity=0.228 Sum_probs=20.3
Q ss_pred CceEEEecchhHHHHHHHHHHhc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
-+|.+.|||+||.+|+..|....
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 47999999999999999997654
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.86 E-value=0.073 Score=42.56 Aligned_cols=42 Identities=21% Similarity=0.108 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcccc
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECK 106 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~ 106 (249)
..+.+.++.|.+.. +.-+|.+.|||+||.+|...|......+
T Consensus 155 ~~~~~~~~~L~~~~----------~~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 155 SGLDAELRRLIELY----------PNYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHHhc----------CCcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 35555666666554 3458999999999999999998765544
No 221
>PLN02719 triacylglycerol lipase
Probab=94.84 E-value=0.069 Score=44.42 Aligned_cols=24 Identities=38% Similarity=0.336 Sum_probs=21.0
Q ss_pred CceEEEecchhHHHHHHHHHHhcc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
-+|.+.|||+||.+|+..|.....
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHH
Confidence 479999999999999999987644
No 222
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.79 E-value=0.077 Score=43.90 Aligned_cols=65 Identities=23% Similarity=0.244 Sum_probs=44.5
Q ss_pred CchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCC
Q 041117 52 SQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGG 124 (249)
Q Consensus 52 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 124 (249)
..-+|+..+.+.+.+... ++.-..++.+|+|.|.||.-+..+|....+.. ...++++.+++++..
T Consensus 174 ~~~~D~~~~~~~f~~~fp-----~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~---~~~~~~~nlssvlig 238 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFP-----HYARLLSPKFLAGESYGGHYIPVFAHELLEDN---IALNGNVNLSSVLIG 238 (498)
T ss_pred ccchhHHHHHHHHHHHHH-----HHhhhcCceeEeeccccchhhHHHHHHHHHhc---cccCCceEeeeeeec
Confidence 345677777777766654 22233468999999999999999998776532 245666666665543
No 223
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.56 E-value=0.27 Score=36.85 Aligned_cols=63 Identities=24% Similarity=0.217 Sum_probs=38.6
Q ss_pred CcEEEeecCCCC-------CCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcc
Q 041117 34 PAVVISVNYRLA-------PENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 34 g~~v~~~d~r~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
|+.+..++|+.+ +...+...+.+-.+.+....+... -..++++|+|+|.|+.++...+.++..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~--------~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAI--------AAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhc--------cCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 566777777642 122233333333333333333211 155789999999999999999988765
No 224
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.55 E-value=0.063 Score=41.01 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..++.+.+..+++.. +..++.+.|||.||.+|..+..++
T Consensus 259 ySa~ldI~~~v~~~Y----------pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 259 YSAALDILGAVRRIY----------PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhC----------CCceEEEeccccchHHHHHhcccc
Confidence 344445555555544 457899999999999999999876
No 225
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.55 E-value=0.063 Score=41.01 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..++.+.+..+++.. +..++.+.|||.||.+|..+..++
T Consensus 259 ySa~ldI~~~v~~~Y----------pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 259 YSAALDILGAVRRIY----------PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhC----------CCceEEEeccccchHHHHHhcccc
Confidence 344445555555544 457899999999999999999876
No 226
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=93.91 E-value=0.96 Score=35.49 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
.+.+..++.+|....+ ..++|+++|+|-|++.|-.+|.-..
T Consensus 104 ~~nI~~AYrFL~~~ye---------pGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 104 VQNIREAYRFLIFNYE---------PGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHHHHHHHhcC---------CCCeEEEeeccchhHHHHHHHHHHH
Confidence 4678889999999886 6789999999999999988887543
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.90 E-value=0.18 Score=42.37 Aligned_cols=63 Identities=16% Similarity=0.019 Sum_probs=47.4
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHC-C-------CceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhh
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRH-G-------KEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~-~-------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~ 245 (249)
.+++.||..|++++. +..+++++.+. + .-.++...||++|+..-....+ -..+..+.+|+++-
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~-~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP-FDALTALVDWVENG 427 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC-CCHHHHHHHHHhCC
Confidence 799999999999963 56667666543 2 2488999999999866432222 68999999999864
No 228
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.14 E-value=0.89 Score=36.19 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=37.4
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhcccc----ccccccccccccccCCCCCC
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECK----FSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 126 (249)
....+++|.|.|.||..+-.+|....+.. ..+..++|+++-+|+++...
T Consensus 48 ~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 48 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccc
Confidence 45678999999999999988888764321 12347899999999887654
No 229
>PLN02847 triacylglycerol lipase
Probab=93.08 E-value=0.19 Score=42.73 Aligned_cols=24 Identities=21% Similarity=0.156 Sum_probs=20.7
Q ss_pred CCceEEEecchhHHHHHHHHHHhc
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
.=+++++|||+||.+|..++....
T Consensus 250 dYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHHHh
Confidence 348999999999999999987654
No 230
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=92.33 E-value=0.37 Score=34.58 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=25.7
Q ss_pred CCCceEEEecchhHHHHHHHHHHhcccccccccccccccc
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPI 118 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 118 (249)
+..++.++|||+|..++...+.. ....+..++++
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~------~~~~vddvv~~ 140 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ------GGLRVDDVVLV 140 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh------CCCCcccEEEE
Confidence 45689999999999999888776 22356666654
No 231
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.99 E-value=5.5 Score=32.05 Aligned_cols=64 Identities=8% Similarity=0.157 Sum_probs=50.8
Q ss_pred cEEEEecCCCcchh--hHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHhhhc
Q 041117 182 ATIVIVGGFDPLKD--WQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRDQSA 247 (249)
Q Consensus 182 P~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~~~~ 247 (249)
+.+-+.+..|.+++ ...++++..++.|..++..-+.++.|.-... ..+ ..+.+...+|+++...
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-~~p-~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-SFP-KTYLKKCSEFLRSVIS 292 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-cCc-HHHHHHHHHHHHhccc
Confidence 47777899999886 3577888888889999999999999986433 223 8999999999987643
No 232
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=90.98 E-value=0.78 Score=33.26 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=41.3
Q ss_pred CCCcEEEEecCCCcchhhH--HHHHHHHHHCC-CceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhh
Q 041117 179 DIPATIVIVGGFDPLKDWQ--KRHYQGLKRHG-KEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 179 ~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~ 245 (249)
..+++|-+-|+.|.+...+ ........... .....++.+|+|| +.+++...= +++...+.+|+.++
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GH-YGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGH-YGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCe-eecccchhhhhhhhHHHHHHHHhC
Confidence 4456888999999998533 22222222211 2356778899999 555655322 67777777777653
No 233
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=90.83 E-value=1.6 Score=40.65 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=54.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHH-HHHHhhccCCCCCCCccCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVL-KFIDTKISTVEDFPACADL 80 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~~~ 80 (249)
|.++|+|- +-| +..-++.++++..+..+.+. +.+.-..+.++++...+ +.+++.. +.
T Consensus 2124 ~~~Ffv~p---IEG------~tt~l~~la~rle~PaYglQ---~T~~vP~dSies~A~~yirqirkvQ----------P~ 2181 (2376)
T KOG1202|consen 2124 PPLFFVHP---IEG------FTTALESLASRLEIPAYGLQ---CTEAVPLDSIESLAAYYIRQIRKVQ----------PE 2181 (2376)
T ss_pred CceEEEec---ccc------chHHHHHHHhhcCCcchhhh---ccccCCcchHHHHHHHHHHHHHhcC----------CC
Confidence 67889997 212 34456778877544443332 22233334455554433 3333322 45
Q ss_pred CceEEEecchhHHHHHHHHHHhccccccccccccccccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQ 119 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 119 (249)
.+..++|.|+|++++..+|....+.. ....+|++.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~----~~~~lillD 2216 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQ----SPAPLILLD 2216 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhc----CCCcEEEec
Confidence 68999999999999999998876543 233366653
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.53 E-value=1.4 Score=37.18 Aligned_cols=45 Identities=22% Similarity=0.232 Sum_probs=38.5
Q ss_pred CccCCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCCCCCC
Q 041117 76 ACADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFFGGEE 126 (249)
Q Consensus 76 ~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 126 (249)
++..+++-+..|.|.||.-++..|.++++ .+.|++.-+|.+....
T Consensus 110 Yg~~p~~sY~~GcS~GGRqgl~~AQryP~------dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 110 YGKAPKYSYFSGCSTGGRQGLMAAQRYPE------DFDGILAGAPAINWTH 154 (474)
T ss_pred hCCCCCceEEEEeCCCcchHHHHHHhChh------hcCeEEeCCchHHHHH
Confidence 45678899999999999999999999654 7999999999886643
No 235
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=90.23 E-value=0.74 Score=36.91 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=52.7
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHh--------CCcEEEeecCCCCC--CCCCCCchhhH--HHHHHHHHhhccC
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKE--------IPAVVISVNYRLAP--ENRYPSQYDDG--IDVLKFIDTKIST 70 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~--------~g~~v~~~d~r~~~--~~~~~~~~~d~--~~~~~~l~~~~~~ 70 (249)
.++++||.. ||-.. +-.++.-|... .-+.|++|..+|.+ +.+-......+ +..++-|
T Consensus 154 PlLl~HGwP---Gsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkL------ 222 (469)
T KOG2565|consen 154 PLLLLHGWP---GSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKL------ 222 (469)
T ss_pred ceEEecCCC---chHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHH------
Confidence 478899933 44222 44555555442 12678888877643 22222333322 2222322
Q ss_pred CCCCCCccCCCceEEEecchhHHHHHHHHHHhcc
Q 041117 71 VEDFPACADLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 71 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
.++++-++.+|-|.-.|..++..+|..+++
T Consensus 223 ----MlRLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 223 ----MLRLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred ----HHHhCcceeEeecCchHHHHHHHHHhhcch
Confidence 233567899999999999999999998664
No 236
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.69 E-value=0.81 Score=35.60 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhcc
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRANE 104 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 104 (249)
-..+..++.++.+... +.++|+|+|+|-|+..|-.++.....
T Consensus 74 ~~~I~~ay~~l~~~~~---------~gd~I~lfGFSRGA~~AR~~a~~i~~ 115 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYE---------PGDRIYLFGFSRGAYTARAFANMIDK 115 (277)
T ss_pred HHHHHHHHHHHHhccC---------CcceEEEEecCccHHHHHHHHHHHhh
Confidence 4567778888877764 66889999999999999999876543
No 237
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=89.25 E-value=0.67 Score=37.10 Aligned_cols=43 Identities=14% Similarity=0.070 Sum_probs=31.4
Q ss_pred CCCceEEEecchhHHHHHHHHHHhccccccccccccccccccCC
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQPFF 122 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 122 (249)
+..++.|+|||+|+-+...+.....++. ....+..++++...+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~-~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERK-AFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhcc-ccCeEeeEEEecCCC
Confidence 5568999999999999999988776542 223467777765433
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.39 E-value=1.5 Score=37.35 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=19.2
Q ss_pred CCceEEEecchhHHHHHHHHHHh
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..+|.-+||||||.++=.+....
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCceEEEecccchHHHHHHHHHH
Confidence 66899999999999987777654
No 239
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=87.72 E-value=1.7 Score=26.00 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=24.1
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEee
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISV 40 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~ 40 (249)
.|.++++|||. +.. -..++.++|++.|+.++.+
T Consensus 31 ~~~~~lvhGga-----~~G--aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGA-----PKG--ADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCC-----CCC--HHHHHHHHHHHCCCeeEEe
Confidence 37789999954 222 4678899999889877654
No 240
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=85.25 E-value=3.8 Score=24.75 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=30.7
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
.+.+.+-++++..... . -.++++.++|.|.|=.+|..+++.+
T Consensus 20 ~~~V~~qI~yvk~~~~------~-~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGK------I-NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC----------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC------C-CCCceEEEEecCCcccHHHHHHHHh
Confidence 4677788888887553 1 3568999999999999999888875
No 241
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=81.04 E-value=1.9 Score=35.06 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=16.8
Q ss_pred CCceEEEecchhHHHHHHHHH
Q 041117 80 LKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~ 100 (249)
.++|-.+|||.||.++.....
T Consensus 149 i~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred cceeeeeeeecCCeeeeEEEE
Confidence 479999999999987655444
No 242
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=80.10 E-value=1.6 Score=35.70 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=39.9
Q ss_pred cEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh--hHHHHHHHHHHH
Q 041117 182 ATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE--GSFIDDVGNFIR 243 (249)
Q Consensus 182 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~--~~~~~~~~~fl~ 243 (249)
.+|+++|+.|+....... +.+...+....+.||++|+-.+..-.+. ++....+.+|..
T Consensus 353 rmlFVYG~nDPW~A~~f~----l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 353 RMLFVYGENDPWSAEPFR----LGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred eEEEEeCCCCCcccCccc----cCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 799999999998742222 2222347788888999998665443332 777888888854
No 243
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=76.98 E-value=17 Score=28.97 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=35.1
Q ss_pred ccCCCceEEEecchhHHHHHHHHHHhc---cccccccccccccccccCCCCC
Q 041117 77 CADLKRCFVAGDSAGGNLAHNVAVRAN---ECKFSKLKLIGVIPIQPFFGGE 125 (249)
Q Consensus 77 ~~~~~~i~l~G~S~GG~~a~~~a~~~~---~~~~~~~~~~~~i~~~p~~~~~ 125 (249)
.+...+++|+-.|.||-+|..++.... +++.-...+.++++=.+|+...
T Consensus 118 e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 118 EFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred cccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 466779999999999999999988653 2222334677788766666443
No 244
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=74.97 E-value=6.7 Score=32.33 Aligned_cols=64 Identities=16% Similarity=0.309 Sum_probs=41.3
Q ss_pred CcEEEEecCCCcchhhH-HHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhh
Q 041117 181 PATIVIVGGFDPLKDWQ-KRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~ 245 (249)
.|++|+.|.-|.+.++- ..+.+.+...|..+-....||.|+... .+-.+. +.....|++||...
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~-~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK-WPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-T-S-S-CCHHHHHHHHHHHHS
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-CCCCcCHHHHHHHHHHHHhcC
Confidence 47999999999998764 444566788888888888999998632 111233 78889999999763
No 245
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=74.54 E-value=14 Score=22.55 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=38.2
Q ss_pred EEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeec--CCCCh-hHHHHHHHHHHH
Q 041117 183 TIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIF--PELHE-GSFIDDVGNFIR 243 (249)
Q Consensus 183 ~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~-~~~~~~~~~fl~ 243 (249)
++|+||-.+..-- -..+++.|.+.| ..+..++--||+...- ...+. +.+++++..|++
T Consensus 19 v~i~HG~~eh~~r-y~~~a~~L~~~G--~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 19 VVIVHGFGEHSGR-YAHLAEFLAEQG--YAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEeCCcHHHHHH-HHHHHHHHHhCC--CEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 8889998765432 245777777765 4566777778875531 12233 888888887763
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.94 E-value=3.7 Score=34.53 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=28.8
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhcccccccccccccccc
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPI 118 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 118 (249)
.+..||.|+|+|.|+-+...+.....+.. .-..|.-++++
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkk-e~~iIEnViL~ 483 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKK-EVGIIENVILF 483 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcc-cccceeeeeec
Confidence 46789999999999999988887655421 22346666666
No 247
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=72.73 E-value=12 Score=32.41 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=40.0
Q ss_pred cEEEEecCCCcchhh---HHHHHHHHHH---CCCceEEEEeCCCceeeee--cCCC--------Ch-hHHHHHHHHHHHh
Q 041117 182 ATIVIVGGFDPLKDW---QKRHYQGLKR---HGKEAYLIEYPNAVHGFYI--FPEL--------HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 182 P~li~~g~~D~~~~~---~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~--~~~~--------~~-~~~~~~~~~fl~~ 244 (249)
|++|+||..|.++|- ++.+....++ .+....++++.++.|.-.+ .+.. .. .+.++.|..+|+.
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~~ 636 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHLKS 636 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHhhc
Confidence 799999999999873 3544444443 2346889999998895332 1111 11 4556666666654
No 248
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=71.89 E-value=6.5 Score=29.72 Aligned_cols=25 Identities=28% Similarity=0.081 Sum_probs=20.2
Q ss_pred cCCCceEEEecchhHHHHHHHHHHh
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+.++.-.+.|-|+|+.++..++...
T Consensus 26 i~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 26 VINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred CCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 3444568999999999999999853
No 249
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=71.05 E-value=7 Score=32.65 Aligned_cols=54 Identities=15% Similarity=0.189 Sum_probs=31.0
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHH
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVG 239 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~ 239 (249)
.-+++.+|+.|+...-+ ........+...+++|+.|+..+....+. .+.+....
T Consensus 377 tnviFtNG~~DPW~~lg-----v~~~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~aR 431 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-----VTSDSSDSVPAIVIPGGAHCSDLYPPNPNDPPELKAAR 431 (434)
T ss_dssp -SEEEEEETT-CCGGGS-------S-SSSSEEEEEETT--TTGGGS---TT--HHHHHHH
T ss_pred CeEEeeCCCCCCccccc-----CCCCCCCCcccEEECCCeeeccccCCCCCCCHHHHHHH
Confidence 46999999999988644 11223446677889999999888766554 44444443
No 250
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=67.00 E-value=17 Score=29.54 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=25.9
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccc
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIP 117 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 117 (249)
+....+.+.|-|--|+.+...|... +++.+++.
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaD-------prv~aIvp 263 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIAD-------PRVFAIVP 263 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcC-------cchhhhhh
Confidence 5678899999999999999888743 35666653
No 251
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.51 E-value=26 Score=27.36 Aligned_cols=87 Identities=11% Similarity=0.164 Sum_probs=46.2
Q ss_pred HHHHHHhCCcEEEeecCCCCCCC-C----CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHH
Q 041117 26 CRRLAKEIPAVVISVNYRLAPEN-R----YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 26 ~~~l~~~~g~~v~~~d~r~~~~~-~----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~ 100 (249)
++.+.. ..++++++-|...|-. . .....+.....++.+.+....+ ..-...|++|.|.|.|+.-+.....
T Consensus 54 ~E~l~~-GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~l----P~~~RPkL~l~GeSLGa~g~~~af~ 128 (289)
T PF10081_consen 54 LEYLYG-GDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTL----PEDRRPKLYLYGESLGAYGGEAAFD 128 (289)
T ss_pred HHHHhC-CCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhC----CcccCCeEEEeccCccccchhhhhc
Confidence 444544 3678888888754421 1 1222333333444443333210 0124468999999999976655444
Q ss_pred Hhcccccccccccccccccc
Q 041117 101 RANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~p 120 (249)
...+. ..++.|++..-|
T Consensus 129 ~~~~~---~~~vdGalw~Gp 145 (289)
T PF10081_consen 129 GLDDL---RDRVDGALWVGP 145 (289)
T ss_pred cHHHh---hhhcceEEEeCC
Confidence 33322 135777776654
No 252
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=63.93 E-value=37 Score=26.11 Aligned_cols=60 Identities=10% Similarity=0.010 Sum_probs=34.9
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCC-h-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELH-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~-~-~~~~~~~~~fl~~ 244 (249)
+|++++||-.+.... -..+.+.+ ....+++.++--||+....+... . +.+.+.+.++++.
T Consensus 26 ~plvllHG~~~~~~~-w~~~~~~L---~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 26 TPLLIFNGIGANLEL-VFPFIEAL---DPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CcEEEEeCCCcchHH-HHHHHHHh---ccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH
Confidence 679999996654321 12233333 33567888888889865332211 1 5666666666654
No 253
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=62.59 E-value=13 Score=26.43 Aligned_cols=22 Identities=32% Similarity=0.249 Sum_probs=19.1
Q ss_pred CceEEEecchhHHHHHHHHHHh
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..-.+.|.|+|+.++..++...
T Consensus 26 ~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 26 LIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred CCCEEEEECHHHHHHHHHHcCC
Confidence 3678999999999999999853
No 254
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=61.81 E-value=17 Score=26.34 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=25.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY 42 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~ 42 (249)
|.+||+-| ..|+..+.--..+.+.|.++ |+.++.+|-
T Consensus 23 ~~viW~TG---LSGsGKSTiA~ale~~L~~~-G~~~y~LDG 59 (197)
T COG0529 23 GAVIWFTG---LSGSGKSTIANALEEKLFAK-GYHVYLLDG 59 (197)
T ss_pred CeEEEeec---CCCCCHHHHHHHHHHHHHHc-CCeEEEecC
Confidence 68999999 44555544334555666664 999999984
No 255
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=61.73 E-value=13 Score=26.95 Aligned_cols=21 Identities=38% Similarity=0.289 Sum_probs=18.2
Q ss_pred ceEEEecchhHHHHHHHHHHh
Q 041117 82 RCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~ 102 (249)
.-.+.|.|+||.+|..++...
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred cceEEEECHHHHHHHHHHcCC
Confidence 368999999999999999753
No 256
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=61.38 E-value=13 Score=31.39 Aligned_cols=61 Identities=18% Similarity=0.309 Sum_probs=40.7
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHH-----------------CC---------C-----ceEEEEeCCCceeeeecCC
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKR-----------------HG---------K-----EAYLIEYPNAVHGFYIFPE 228 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~-----------------~~---------~-----~~~~~~~~~~~H~~~~~~~ 228 (249)
+|||..|..|.+++. ..++.+.++- .+ . +..+..+.++||......+
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P 445 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQP 445 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHH
Confidence 599999999988863 3555555540 01 1 4566777899995443322
Q ss_pred CChhHHHHHHHHHHHhh
Q 041117 229 LHEGSFIDDVGNFIRDQ 245 (249)
Q Consensus 229 ~~~~~~~~~~~~fl~~~ 245 (249)
+...+.+.+|+...
T Consensus 446 ---~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 446 ---AVALTMINRFLRNR 459 (462)
T ss_pred ---HHHHHHHHHHHcCC
Confidence 78888888888653
No 257
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=59.78 E-value=6.7 Score=22.76 Aligned_cols=9 Identities=33% Similarity=0.689 Sum_probs=4.8
Q ss_pred CCEEEEEec
Q 041117 1 LPVIVYFHG 9 (249)
Q Consensus 1 ~P~vv~~HG 9 (249)
+|+|++.||
T Consensus 43 k~pVll~HG 51 (63)
T PF04083_consen 43 KPPVLLQHG 51 (63)
T ss_dssp --EEEEE--
T ss_pred CCcEEEECC
Confidence 489999999
No 258
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=59.74 E-value=7.8 Score=30.81 Aligned_cols=18 Identities=39% Similarity=0.569 Sum_probs=16.4
Q ss_pred EEEecchhHHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~ 101 (249)
.+.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 699999999999999974
No 259
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=59.63 E-value=41 Score=25.26 Aligned_cols=16 Identities=31% Similarity=0.206 Sum_probs=11.4
Q ss_pred cCCCceEEEecchhHHH
Q 041117 78 ADLKRCFVAGDSAGGNL 94 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~ 94 (249)
+..+++.++|.| ||..
T Consensus 126 ~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 126 TQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred cCCCcEEEEEeC-CcHh
Confidence 456789999998 5433
No 260
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=56.98 E-value=30 Score=29.20 Aligned_cols=61 Identities=13% Similarity=0.058 Sum_probs=40.9
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHCCC---------------------ceEEEEeCCCceeeeecCCCChhHHHHHH
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRHGK---------------------EAYLIEYPNAVHGFYIFPELHEGSFIDDV 238 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~~~---------------------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 238 (249)
+++|..|+.|.++|- ++.+.+.+..... +..+..+.|+||......+ +....-+
T Consensus 365 rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p---~~al~m~ 441 (454)
T KOG1282|consen 365 RVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKP---ESALIMF 441 (454)
T ss_pred EEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCc---HHHHHHH
Confidence 599999999998873 3555555542110 1455777899996554443 6777888
Q ss_pred HHHHHhh
Q 041117 239 GNFIRDQ 245 (249)
Q Consensus 239 ~~fl~~~ 245 (249)
.+||..+
T Consensus 442 ~~fl~g~ 448 (454)
T KOG1282|consen 442 QRFLNGQ 448 (454)
T ss_pred HHHHcCC
Confidence 8888764
No 261
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=56.42 E-value=45 Score=24.15 Aligned_cols=34 Identities=15% Similarity=0.276 Sum_probs=22.5
Q ss_pred HHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 59 DVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
++++|+.... ...+++.+++.|.|+.-+......
T Consensus 88 naiD~l~~~~---------~~~Kpv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 88 NAIDWLSREA---------LGGKPVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHhCCHhH---------hCCCcEEEEecCCCchhHHHHHHH
Confidence 5566665442 456788888888887766655554
No 262
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=55.74 E-value=28 Score=27.82 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=40.4
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCceeeeecCCCChhHHHHHH
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRHG--------------------KE-AYLIEYPNAVHGFYIFPELHEGSFIDDV 238 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 238 (249)
++||..|..|.+++. ...+.+.++-.+ .+ .++..+.++||.... . | +..++-+
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~-q--P-~~al~m~ 310 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-R--P-NETFIMF 310 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCc-C--H-HHHHHHH
Confidence 599999999998864 466777765111 12 667777799996432 1 2 7777777
Q ss_pred HHHHHh
Q 041117 239 GNFIRD 244 (249)
Q Consensus 239 ~~fl~~ 244 (249)
-+|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 788764
No 263
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.65 E-value=21 Score=26.73 Aligned_cols=20 Identities=25% Similarity=0.248 Sum_probs=17.3
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
.-.+.|.|+|+.+|..++..
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 29 PSAISGTSAGALVGGLFASG 48 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcC
Confidence 34799999999999999974
No 264
>PRK10279 hypothetical protein; Provisional
Probab=55.59 E-value=19 Score=28.47 Aligned_cols=21 Identities=29% Similarity=0.214 Sum_probs=18.2
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
..-.+.|.|+|+.++..+|..
T Consensus 33 ~~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 33 EIDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred CcCEEEEEcHHHHHHHHHHcC
Confidence 457899999999999999864
No 265
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=55.27 E-value=22 Score=25.33 Aligned_cols=20 Identities=30% Similarity=0.240 Sum_probs=17.4
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
.-.+.|.|+|+.+|..++..
T Consensus 29 ~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred eeEEEEECHHHHHHHHHHcC
Confidence 34899999999999999864
No 266
>PRK10673 acyl-CoA esterase; Provisional
Probab=55.17 E-value=69 Score=24.01 Aligned_cols=62 Identities=13% Similarity=0.167 Sum_probs=36.1
Q ss_pred CCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHh
Q 041117 179 DIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 179 ~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~ 244 (249)
..||++++||--+.... -..+...+.+ ...++.++--||+.......-. ++..+++.++++.
T Consensus 15 ~~~~iv~lhG~~~~~~~-~~~~~~~l~~---~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDN-LGVLARDLVN---DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCCEEEECCCCCchhH-HHHHHHHHhh---CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 34789999997654321 1334444543 4566777766776443222112 6777777777764
No 267
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=54.72 E-value=19 Score=30.04 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=17.4
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
+-+|.|.|+|+.+|..++..
T Consensus 102 p~vIsGTSaGAivAal~as~ 121 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTH 121 (421)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 34799999999999999974
No 268
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=53.38 E-value=19 Score=28.15 Aligned_cols=32 Identities=25% Similarity=0.519 Sum_probs=25.1
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAP 46 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~ 46 (249)
|.|+|.-|+|+ .+++++. .||.|+..|+...|
T Consensus 253 Pmi~fakG~g~------------~Le~l~~-tG~DVvgLDWTvdp 284 (359)
T KOG2872|consen 253 PMILFAKGSGG------------ALEELAQ-TGYDVVGLDWTVDP 284 (359)
T ss_pred ceEEEEcCcch------------HHHHHHh-cCCcEEeecccccH
Confidence 88999998552 4678887 59999999987543
No 269
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=53.16 E-value=25 Score=25.07 Aligned_cols=22 Identities=23% Similarity=0.196 Sum_probs=18.6
Q ss_pred CceEEEecchhHHHHHHHHHHh
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..=.+.|.|+|+.+|..++...
T Consensus 28 ~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 28 EIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred CeeEEEEeCHHHHHHHHHHcCC
Confidence 3568999999999999998753
No 270
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=52.76 E-value=21 Score=28.29 Aligned_cols=21 Identities=24% Similarity=0.177 Sum_probs=18.3
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
..-.+.|.|+|+.++..++..
T Consensus 43 ~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 43 PVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CCCEEEEECHHHHHHHHHHcC
Confidence 456899999999999999975
No 271
>PLN02209 serine carboxypeptidase
Probab=51.75 E-value=37 Score=28.52 Aligned_cols=59 Identities=8% Similarity=0.010 Sum_probs=41.1
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCceeeeecCCCChhHHHHHH
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRHG--------------------KE-AYLIEYPNAVHGFYIFPELHEGSFIDDV 238 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 238 (249)
++||..|..|.+++. ++.+.+.++-.+ .+ .++..+-++||.... . | +...+-+
T Consensus 353 rVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~-q--P-~~al~m~ 428 (437)
T PLN02209 353 RSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEY-L--P-EESSIMF 428 (437)
T ss_pred eEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCc-C--H-HHHHHHH
Confidence 599999999999864 467777776111 12 667778889996532 1 1 7788888
Q ss_pred HHHHHh
Q 041117 239 GNFIRD 244 (249)
Q Consensus 239 ~~fl~~ 244 (249)
.+|+..
T Consensus 429 ~~fi~~ 434 (437)
T PLN02209 429 QRWISG 434 (437)
T ss_pred HHHHcC
Confidence 888764
No 272
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=51.61 E-value=1.1e+02 Score=24.34 Aligned_cols=63 Identities=16% Similarity=0.131 Sum_probs=40.5
Q ss_pred EEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhh
Q 041117 183 TIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 183 ~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~ 245 (249)
++++||-.....-.-..++.++..+|-.+--.-+.|.|+.--...-.+. +.+++++.+|+...
T Consensus 57 v~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i 120 (313)
T KOG1455|consen 57 VFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSI 120 (313)
T ss_pred EEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHH
Confidence 7888887655432235677888887765555555555544333333345 89999999999863
No 273
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=50.29 E-value=25 Score=26.17 Aligned_cols=22 Identities=18% Similarity=0.142 Sum_probs=18.7
Q ss_pred CceEEEecchhHHHHHHHHHHh
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..-.+.|.|+|+.+|+.++...
T Consensus 26 ~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 26 EPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CCCEEEEECHHHHHHHHHHcCC
Confidence 3458999999999999999854
No 274
>PLN02578 hydrolase
Probab=50.21 E-value=78 Score=25.57 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=37.5
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh--hHHHHHHHHHHHhhh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE--GSFIDDVGNFIRDQS 246 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~--~~~~~~~~~fl~~~~ 246 (249)
||++++||-...... -......+. ....++.++--||+....+.... +.+.+++.+|+++..
T Consensus 87 ~~vvliHG~~~~~~~-w~~~~~~l~---~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~ 150 (354)
T PLN02578 87 LPIVLIHGFGASAFH-WRYNIPELA---KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV 150 (354)
T ss_pred CeEEEECCCCCCHHH-HHHHHHHHh---cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc
Confidence 679999998764221 122333443 24677788878887654332211 566778888887643
No 275
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=49.94 E-value=28 Score=26.60 Aligned_cols=18 Identities=28% Similarity=0.267 Sum_probs=16.1
Q ss_pred EEEecchhHHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~ 101 (249)
.+.|.|+|+.+|..++..
T Consensus 33 ~i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 33 KISGASAGALAACCLLCD 50 (245)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 399999999999999875
No 276
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=49.80 E-value=14 Score=29.30 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=15.6
Q ss_pred EEEecchhHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~ 100 (249)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999986
No 277
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=49.10 E-value=40 Score=28.30 Aligned_cols=60 Identities=10% Similarity=0.062 Sum_probs=41.2
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCceeeeecCCCChhHHHHHH
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRHG--------------------KE-AYLIEYPNAVHGFYIFPELHEGSFIDDV 238 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 238 (249)
++||..|..|.+++. ...+.+.++-.+ .+ .++..+-++||.... . | +...+-+
T Consensus 349 rVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~-q--P-~~al~m~ 424 (433)
T PLN03016 349 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-R--P-NETFIMF 424 (433)
T ss_pred eEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCC-C--H-HHHHHHH
Confidence 599999999998863 466666665111 12 667778889996532 1 2 7778888
Q ss_pred HHHHHhh
Q 041117 239 GNFIRDQ 245 (249)
Q Consensus 239 ~~fl~~~ 245 (249)
-+|+..+
T Consensus 425 ~~Fi~~~ 431 (433)
T PLN03016 425 QRWISGQ 431 (433)
T ss_pred HHHHcCC
Confidence 8888653
No 278
>COG4425 Predicted membrane protein [Function unknown]
Probab=48.77 E-value=48 Score=27.86 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCcEEEeecCCCC---------CCCCCCCchhhHHH-HHHHHHhhccCCCCCCCccCCCceEEEecchhHH
Q 041117 24 DHCRRLAKEIPAVVISVNYRLA---------PENRYPSQYDDGID-VLKFIDTKISTVEDFPACADLKRCFVAGDSAGGN 93 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~---------~~~~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~ 93 (249)
..++.|-. ..++.+++.|..- ++... +..+.+.+ .+.+..+... -...|+++.|.|.|++
T Consensus 340 ~t~EyL~~-Gd~asVsmQYSyL~SwLSllvdpdyg~-~aa~aLf~aVy~yw~qLP~--------~sRPKLylhG~SLGa~ 409 (588)
T COG4425 340 DTLEYLYN-GDVASVSMQYSYLPSWLSLLVDPDYGA-DAARALFEAVYGYWTQLPK--------SSRPKLYLHGESLGAM 409 (588)
T ss_pred hHHHHHhC-CceEEEEEehhhHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHhCCc--------CCCCceEEeccccccc
Confidence 44555554 3677777777632 22111 12222222 2344444432 2456899999999986
Q ss_pred HH
Q 041117 94 LA 95 (249)
Q Consensus 94 ~a 95 (249)
-.
T Consensus 410 ~s 411 (588)
T COG4425 410 GS 411 (588)
T ss_pred cC
Confidence 43
No 279
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=48.48 E-value=23 Score=23.18 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=23.3
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecC
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY 42 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~ 42 (249)
+|++.| ..|+.. ..+++.|+++.|+.++..|-
T Consensus 1 vI~I~G---~~gsGK----ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISG---PPGSGK----STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEE---STTSSH----HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEEC---CCCCCH----HHHHHHHHHHHCCeEEEecc
Confidence 567777 234433 46789999988999988886
No 280
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.12 E-value=30 Score=26.39 Aligned_cols=20 Identities=35% Similarity=0.298 Sum_probs=17.5
Q ss_pred eEEEecchhHHHHHHHHHHh
Q 041117 83 CFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~~ 102 (249)
-.+.|.|+|+.+|..++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 48999999999999999753
No 281
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=47.72 E-value=36 Score=23.78 Aligned_cols=19 Identities=26% Similarity=0.358 Sum_probs=16.7
Q ss_pred CceEEEecchhHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a 99 (249)
.--.+.|.|+|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4568999999999999988
No 282
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=47.47 E-value=45 Score=26.27 Aligned_cols=43 Identities=19% Similarity=0.318 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhc
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
..+.+-++|..... ...-++.++.++|.|.|=.+|...++.+.
T Consensus 22 ~nV~~QI~y~k~~g------p~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 22 ANVLQQIDYVKAAG------PIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHhcC------CccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 45666677776654 23346889999999999999999998875
No 283
>PRK03592 haloalkane dehalogenase; Provisional
Probab=47.33 E-value=1.1e+02 Score=23.72 Aligned_cols=60 Identities=8% Similarity=0.003 Sum_probs=36.9
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCC-h-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELH-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~-~-~~~~~~~~~fl~~ 244 (249)
||++++||.-..... =..+.+.+.+.+ +++.++--||+....+... . +...+++.++++.
T Consensus 28 ~~vvllHG~~~~~~~-w~~~~~~L~~~~---~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYL-WRNIIPHLAGLG---RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHH-HHHHHHHHhhCC---EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 689999997543221 134555565443 6777777788765433221 2 6777777777764
No 284
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=47.29 E-value=17 Score=28.52 Aligned_cols=19 Identities=37% Similarity=0.443 Sum_probs=16.9
Q ss_pred eEEEecchhHHHHHHHHHH
Q 041117 83 CFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~ 101 (249)
=.+.|.|.||.+|+.++..
T Consensus 36 D~i~GTSaGaiia~~la~g 54 (288)
T cd07213 36 DLFAGTSAGSLIALGLALG 54 (288)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 3799999999999999864
No 285
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=47.20 E-value=32 Score=27.25 Aligned_cols=24 Identities=29% Similarity=0.250 Sum_probs=20.5
Q ss_pred CCCceEEEecchhHHHHHHHHHHh
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+...-.|.|.|+|+.++..+|...
T Consensus 37 gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 37 GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCCccEEEecCHHHHHHHHHHcCC
Confidence 456789999999999999999853
No 286
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=46.71 E-value=17 Score=25.84 Aligned_cols=23 Identities=26% Similarity=0.169 Sum_probs=17.8
Q ss_pred CCceEEEecchhHHHHHHHHHHh
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..--.+.|.|.||.+|+.++...
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCccEEEEcChhhhhHHHHHhCC
Confidence 34467999999999998888763
No 287
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.04 E-value=14 Score=29.27 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=15.5
Q ss_pred EEEecchhHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~ 100 (249)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 79999999999999874
No 288
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=46.01 E-value=1.3e+02 Score=22.70 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=30.1
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCC-C---Ch-hHHHHHHHHHHH
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPE-L---HE-GSFIDDVGNFIR 243 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~---~~-~~~~~~~~~fl~ 243 (249)
.+|++++||.-......-..+...+++.+ ..++.++--||+....+. . -. +.+.+++..+++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEG--REVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVRE 91 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcC--CEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHH
Confidence 36799999964322221233444555444 445555544554332211 1 11 556666666554
No 289
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=45.69 E-value=33 Score=26.68 Aligned_cols=21 Identities=19% Similarity=0.075 Sum_probs=18.3
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.-=.+.|.|+|+.++..+|..
T Consensus 38 ~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 38 PIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred CccEEEEECHHHHHHHHHHcC
Confidence 456899999999999999975
No 290
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=45.40 E-value=18 Score=29.23 Aligned_cols=18 Identities=39% Similarity=0.619 Sum_probs=16.3
Q ss_pred EEEecchhHHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~ 101 (249)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 799999999999999864
No 291
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.05 E-value=20 Score=27.67 Aligned_cols=21 Identities=29% Similarity=0.091 Sum_probs=18.0
Q ss_pred ceEEEecchhHHHHHHHHHHh
Q 041117 82 RCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~~ 102 (249)
-=.+.|.|+|+.++..++...
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCC
Confidence 348999999999999998864
No 292
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=44.96 E-value=65 Score=22.06 Aligned_cols=21 Identities=29% Similarity=0.165 Sum_probs=16.6
Q ss_pred hHHHHHHHHhCCcEEEeecCC
Q 041117 23 DDHCRRLAKEIPAVVISVNYR 43 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r 43 (249)
..-+.+++...||.|..+|-|
T Consensus 10 a~al~~la~~lg~~v~v~d~r 30 (136)
T PF13478_consen 10 ARALARLAALLGFRVTVVDPR 30 (136)
T ss_dssp HHHHHHHHHHCTEEEEEEES-
T ss_pred HHHHHHHHHhCCCEEEEEcCC
Confidence 455677888899999999988
No 293
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=44.16 E-value=13 Score=30.59 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=36.8
Q ss_pred cEEEEecCCCcchhh--HHHHHHHHHHCC----------------------CceEEEEeCCCceeeeecCCCChhHHHHH
Q 041117 182 ATIVIVGGFDPLKDW--QKRHYQGLKRHG----------------------KEAYLIEYPNAVHGFYIFPELHEGSFIDD 237 (249)
Q Consensus 182 P~li~~g~~D~~~~~--~~~~~~~l~~~~----------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 237 (249)
+|||.+|..|.+++. ++.+.+.+.-.+ .+..+..+.++||......+ +...+-
T Consensus 332 rVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP---~~a~~m 408 (415)
T PF00450_consen 332 RVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQP---EAALQM 408 (415)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSH---HHHHHH
T ss_pred eeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCH---HHHHHH
Confidence 699999999999974 366666654111 14678889999996554333 667777
Q ss_pred HHHHHH
Q 041117 238 VGNFIR 243 (249)
Q Consensus 238 ~~~fl~ 243 (249)
+.+||+
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 777764
No 294
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=43.84 E-value=18 Score=29.32 Aligned_cols=18 Identities=28% Similarity=0.505 Sum_probs=16.3
Q ss_pred EEEecchhHHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~ 101 (249)
.+.|.|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 699999999999999874
No 295
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.28 E-value=34 Score=28.47 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=17.9
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.+=++.|.|+|+.+|..++..
T Consensus 95 lp~iI~GtSAGAivaalla~~ 115 (407)
T cd07232 95 LPNVISGTSGGSLVAALLCTR 115 (407)
T ss_pred CCCEEEEECHHHHHHHHHHcC
Confidence 345699999999999999984
No 296
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=43.15 E-value=48 Score=24.49 Aligned_cols=57 Identities=9% Similarity=0.089 Sum_probs=34.9
Q ss_pred cEEEEecCCCcchhhH-HHHHHHHH-HCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHH
Q 041117 182 ATIVIVGGFDPLKDWQ-KRHYQGLK-RHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFI 242 (249)
Q Consensus 182 P~li~~g~~D~~~~~~-~~~~~~l~-~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl 242 (249)
|..+.....|+..... ........ ....+++++.++| +|...+. +. .++.+.|.+||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~---~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 170 PITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLK---PHVAEIAEKIAEWL 229 (229)
T ss_dssp EEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHS---TTHHHHHHHHHHHH
T ss_pred cEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecc---hHHHHHHHHHhccC
Confidence 4778888888777533 22333233 3455788889987 9955543 22 56666666654
No 297
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=42.74 E-value=21 Score=27.45 Aligned_cols=18 Identities=39% Similarity=0.667 Sum_probs=16.5
Q ss_pred EEEecchhHHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~~ 101 (249)
.+.|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 689999999999999986
No 298
>PRK12467 peptide synthase; Provisional
Probab=42.55 E-value=1.1e+02 Score=33.96 Aligned_cols=25 Identities=32% Similarity=0.159 Sum_probs=21.0
Q ss_pred CceEEEecchhHHHHHHHHHHhccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANEC 105 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~ 105 (249)
.+..+.|+|.||.++..++......
T Consensus 3757 ~p~~l~g~s~g~~~a~~~~~~l~~~ 3781 (3956)
T PRK12467 3757 GPYGLLGWSLGGTLARLVAELLERE 3781 (3956)
T ss_pred CCeeeeeeecchHHHHHHHHHHHHc
Confidence 4689999999999999998876543
No 299
>PRK09330 cell division protein FtsZ; Validated
Probab=42.48 E-value=1.5e+02 Score=24.59 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=33.1
Q ss_pred EEEEEec-CccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCC-CCCCCchhhHHHHHHHHHhhc
Q 041117 3 VIVYFHG-GGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPE-NRYPSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 3 ~vv~~HG-gg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~-~~~~~~~~d~~~~~~~l~~~~ 68 (249)
.|+.+|| || |..+. ..+.+.+++++.|..++++=- .|. .........+...++.|.+..
T Consensus 100 ~vfI~AGmGG---GTGTG--aapvIA~iake~g~ltvaVvt--~PF~fEG~~r~~nA~~gL~~L~~~~ 160 (384)
T PRK09330 100 MVFITAGMGG---GTGTG--AAPVVAEIAKELGILTVAVVT--KPFSFEGKKRMKQAEEGIEELRKHV 160 (384)
T ss_pred EEEEEecCCC---cccHH--HHHHHHHHHHHcCCcEEEEEe--cCccccchhHHHHHHHHHHHHHHHC
Confidence 5788999 33 22222 456888999888876655421 111 111223455556666666654
No 300
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=41.72 E-value=1.3e+02 Score=24.12 Aligned_cols=63 Identities=13% Similarity=-0.003 Sum_probs=35.7
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecC-CC-Ch-hHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFP-EL-HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~-~~-~~~~~~~~~fl~~ 244 (249)
.++++++||-.....-.-..+++.+.+.| ..++.++--||+..... .. .. +.+.+++.+++..
T Consensus 87 ~~~iv~lHG~~~~~~~~~~~~~~~l~~~g--~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~ 152 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFFFEGIARKIASSG--YGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSK 152 (349)
T ss_pred CeEEEEECCCCCccchHHHHHHHHHHhCC--CEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH
Confidence 35699999986543211134556666554 45566666677644221 11 23 6677777777654
No 301
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.10 E-value=15 Score=28.26 Aligned_cols=15 Identities=27% Similarity=0.463 Sum_probs=12.8
Q ss_pred CCCceEEEecchhHH
Q 041117 79 DLKRCFVAGDSAGGN 93 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~ 93 (249)
+...|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 558899999999874
No 302
>PLN02606 palmitoyl-protein thioesterase
Probab=40.80 E-value=79 Score=25.13 Aligned_cols=37 Identities=16% Similarity=0.021 Sum_probs=25.3
Q ss_pred CcEEEEecCCCcchhhH-HHHHHHHHHC-CCceEEEEeC
Q 041117 181 PATIVIVGGFDPLKDWQ-KRHYQGLKRH-GKEAYLIEYP 217 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~-~~~~~~l~~~-~~~~~~~~~~ 217 (249)
.|++|+||-.|.....+ ..+.+.+++. +.++..+.+.
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig 65 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIG 65 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEEC
Confidence 46999999999877544 5566666533 6666555553
No 303
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=39.62 E-value=46 Score=27.48 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=18.1
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.+=+|.|.|+|+.+|..+|..
T Consensus 111 ~p~~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 111 LPRIITGTATGALIAALVGVH 131 (391)
T ss_pred CCceEEEecHHHHHHHHHHcC
Confidence 444699999999999999984
No 304
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.32 E-value=24 Score=28.35 Aligned_cols=17 Identities=41% Similarity=0.503 Sum_probs=14.9
Q ss_pred EEEecchhHHHHHHHHH
Q 041117 84 FVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 84 ~l~G~S~GG~~a~~~a~ 100 (249)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 79999999999988764
No 305
>PRK14431 acylphosphatase; Provisional
Probab=38.23 E-value=1e+02 Score=19.31 Aligned_cols=47 Identities=13% Similarity=-0.069 Sum_probs=33.6
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhc
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~ 68 (249)
|+.+..++|.+.|..-.+-|....=+......-+++.+++.||.+..
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~g~ 63 (89)
T PRK14431 17 FRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIEGA 63 (89)
T ss_pred EhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhcCC
Confidence 78899999999999988887654212223445667888888887643
No 306
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=37.99 E-value=57 Score=27.77 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=31.1
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL 229 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 229 (249)
.-|++.+|..|+.-. .- .....+..+....+.|+.|+-.+.+..
T Consensus 434 tnVvf~NG~~DPWh~--LG---~~~st~~~~~~~li~gtsHCaDMyp~~ 477 (514)
T KOG2182|consen 434 TNVVFPNGSLDPWHA--LG---LQNSTDSSVVSILINGTSHCADMYPAR 477 (514)
T ss_pred ceEEecCCCCCchhh--hc---cccCCCCCceEEEecCCccccccCCCC
Confidence 359999999998653 11 111334578889999999998876544
No 307
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=37.10 E-value=58 Score=26.09 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=17.6
Q ss_pred CceEEEecchhHHHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.+-++.|.|+|+.+|..++..
T Consensus 96 ~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 96 LPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCEEEEECHHHHHHHHHHcC
Confidence 344699999999999999874
No 308
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=36.70 E-value=2e+02 Score=22.23 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=25.3
Q ss_pred CcEEEEecCCCcchh---hHHHHHHHHHHCCCceEEEEeCCCceee
Q 041117 181 PATIVIVGGFDPLKD---WQKRHYQGLKRHGKEAYLIEYPNAVHGF 223 (249)
Q Consensus 181 pP~li~~g~~D~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 223 (249)
++++++||..+.... ....+++.+.+.|. .+..++--||+-
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~--~v~~~Dl~G~G~ 70 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGF--PVLRFDYRGMGD 70 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCC--EEEEeCCCCCCC
Confidence 468888887765442 12456777877664 455555556663
No 309
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=36.53 E-value=33 Score=26.65 Aligned_cols=22 Identities=41% Similarity=0.302 Sum_probs=17.9
Q ss_pred CCceEEEecchhHHHHHHHHHH
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
..+-.++|||+|=+.|+.++..
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 4677999999999888877743
No 310
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=36.12 E-value=1.7e+02 Score=22.02 Aligned_cols=52 Identities=10% Similarity=-0.004 Sum_probs=29.1
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCc-EEEeecCCCCCCCCCCCchhhHHHHHHHHHhhc
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPA-VVISVNYRLAPENRYPSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~-~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~ 68 (249)
+|++.||.-. .... +-.-+..+....|| .|++..-.+. .++...++++.+..
T Consensus 140 ~vlmgHGt~h----~s~~-~YacLd~~~~~~~f~~v~v~~ve~y---------P~~d~vi~~l~~~~ 192 (265)
T COG4822 140 LVLMGHGTDH----HSNA-AYACLDHVLDEYGFDNVFVAAVEGY---------PLVDTVIEYLRKNG 192 (265)
T ss_pred EEEEecCCCc----cHHH-HHHHHHHHHHhcCCCceEEEEecCC---------CcHHHHHHHHHHcC
Confidence 6889999321 1122 22334555566687 5555443332 34567888887765
No 311
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=35.94 E-value=1.9e+02 Score=22.02 Aligned_cols=19 Identities=32% Similarity=0.157 Sum_probs=14.1
Q ss_pred ceEEEecchhHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~ 100 (249)
-..++|.|+|+.++.....
T Consensus 113 G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 113 GTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred CCEEEEECHHHHhhhccce
Confidence 3779999999988554443
No 312
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=35.75 E-value=65 Score=22.71 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=22.8
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
.|.+||+=| ..|+..+.--..+.++|.++ |+.++.+|
T Consensus 1 ~g~vIwltG---lsGsGKtTlA~~L~~~L~~~-g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTG---LSGSGKTTLARALERRLFAR-GIKVYLLD 37 (156)
T ss_dssp S-EEEEEES---STTSSHHHHHHHHHHHHHHT-TS-EEEEE
T ss_pred CCEEEEEEC---CCCCCHHHHHHHHHHHHHHc-CCcEEEec
Confidence 478999999 33554443234555566554 99999987
No 313
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=35.72 E-value=1.1e+02 Score=23.57 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=30.3
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhh
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDD 56 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d 56 (249)
++|+..|. .+-.....+.++.+++++|+.|+.+..-|.+.-.++....|
T Consensus 147 L~fFy~s~----Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~fp~~~~d 195 (248)
T PRK13703 147 LMFFYRGQ----DPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPLLPDSRTD 195 (248)
T ss_pred EEEEECCC----CchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCccC
Confidence 45555533 23344467889999999999997776555443344444333
No 314
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=35.45 E-value=47 Score=26.39 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=32.8
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCChhHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHEGSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~fl~~ 244 (249)
|--.++.|+.+. ..++.+.+++.+......-...+-|.-.+ +...+.+.+++..
T Consensus 156 ~~q~visG~~~~----l~~~~~~l~~~~~~~~~l~v~~afHs~~m------~~~~~~~~~~l~~ 209 (318)
T PF00698_consen 156 PRQVVISGEREA----LEALVERLKAEGIKAKRLPVSYAFHSPLM------EPAADEFREALES 209 (318)
T ss_dssp TTEEEEEEEHHH----HHHHHHHHHHTTSEEEEESSSSETTSGGG------HHHHHHHHHHHHT
T ss_pred ccccccCCCHHH----HHHHHHHhhccceeEEEeeeeccccCchh------hhhHHHHHhhhhc
Confidence 445666666543 24677788887766666666677774332 5555566666554
No 315
>PRK00870 haloalkane dehalogenase; Provisional
Probab=35.34 E-value=2e+02 Score=22.44 Aligned_cols=61 Identities=11% Similarity=0.050 Sum_probs=32.8
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC--C-h-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL--H-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~-~-~~~~~~~~~fl~~ 244 (249)
||++++||--..... =..+.+.+.+.+ .+++.++--||+....+.. . . +...+.+.+++++
T Consensus 47 ~~lvliHG~~~~~~~-w~~~~~~L~~~g--y~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 47 PPVLLLHGEPSWSYL-YRKMIPILAAAG--HRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CEEEEECCCCCchhh-HHHHHHHHHhCC--CEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 679999996432111 134555565443 4556666666664422111 1 1 5666777777654
No 316
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=35.28 E-value=1.8e+02 Score=23.78 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=43.9
Q ss_pred EEEEEecCccccCCCCccch-hHHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 3 VIVYFHGGGFVLLAANSKRY-DDHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~-~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
.|+|-|-.+...-. +..+. ...++.+.++ |-.|.+-=|+..-.-+....+.|+.+.++++++-. +.+
T Consensus 268 PVIFSHSsA~~vcn-s~rNVPDdVL~llk~N-gGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va----------G~~ 335 (419)
T KOG4127|consen 268 PVIFSHSSAYSVCN-SSRNVPDDVLQLLKEN-GGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA----------GID 335 (419)
T ss_pred ceEeecccHHHHhc-CccCCcHHHHHHHhhc-CCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh----------ccc
Confidence 57888886653222 12223 4566666665 43333322332211233455899999999998876 467
Q ss_pred ceEEEecch
Q 041117 82 RCFVAGDSA 90 (249)
Q Consensus 82 ~i~l~G~S~ 90 (249)
.|.|.|.=-
T Consensus 336 hIGlGg~yD 344 (419)
T KOG4127|consen 336 HIGLGGDYD 344 (419)
T ss_pred eeeccCCcC
Confidence 787776433
No 317
>COG2074 2-phosphoglycerate kinase [Carbohydrate transport and metabolism]
Probab=34.87 E-value=82 Score=24.44 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=38.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcE-EEeecCC------CCCCCCCCCchhhHHHHHHHHHhhc
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAV-VISVNYR------LAPENRYPSQYDDGIDVLKFIDTKI 68 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~-v~~~d~r------~~~~~~~~~~~~d~~~~~~~l~~~~ 68 (249)
|.|+++=| . .|... ...+..+|.+.|+. |+.-|+- ..+....|+......+|++.+....
T Consensus 89 p~IILIGG-a--sGVGk----StIA~ElA~rLgI~~visTD~IREvlR~ii~~~l~PtLh~Ssy~Awkalr~~~ 155 (299)
T COG2074 89 PLIILIGG-A--SGVGK----STIAGELARRLGIRSVISTDSIREVLRKIISPELLPTLHTSSYDAWKALRDPT 155 (299)
T ss_pred CeEEEecC-C--CCCCh----hHHHHHHHHHcCCceeecchHHHHHHHHhCCHHhcchhhHhHHHHHHHhcCCC
Confidence 67777765 2 23333 35788889998985 5556652 1233345677777888888887654
No 318
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=34.64 E-value=1.4e+02 Score=22.93 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=22.9
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR 43 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 43 (249)
=|++=|+|. ....+.+++...||.|.++|-|
T Consensus 102 ~L~IfGaG~---------va~~la~la~~lGf~V~v~D~R 132 (246)
T TIGR02964 102 HVVLFGAGH---------VGRALVRALAPLPCRVTWVDSR 132 (246)
T ss_pred EEEEECCcH---------HHHHHHHHHhcCCCEEEEEeCC
Confidence 466667653 3455677788899999999987
No 319
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.54 E-value=19 Score=30.40 Aligned_cols=24 Identities=42% Similarity=0.533 Sum_probs=19.8
Q ss_pred CCceEEEecchhHHHHHHHHHHhc
Q 041117 80 LKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
.-+=+|.|.|+||.+|..++.+..
T Consensus 201 LlP~IIsGsS~GaivAsl~~v~~~ 224 (543)
T KOG2214|consen 201 LLPNIISGSSAGAIVASLVGVRSN 224 (543)
T ss_pred ccchhhcCCchhHHHHHHHhhcch
Confidence 345689999999999999998743
No 320
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=34.46 E-value=62 Score=25.62 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=17.3
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
+-++.|.|+|+.+|..++..
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcC
Confidence 34699999999999999974
No 321
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=34.37 E-value=91 Score=20.79 Aligned_cols=12 Identities=17% Similarity=0.512 Sum_probs=9.0
Q ss_pred CEEEEEecCccc
Q 041117 2 PVIVYFHGGGFV 13 (249)
Q Consensus 2 P~vv~~HGgg~~ 13 (249)
-++|++||.-|.
T Consensus 57 klaIfVDGcfWH 68 (117)
T TIGR00632 57 RCVIFIHGCFWH 68 (117)
T ss_pred CEEEEEcccccc
Confidence 478999997554
No 322
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=34.24 E-value=41 Score=26.36 Aligned_cols=21 Identities=38% Similarity=0.229 Sum_probs=17.6
Q ss_pred CCceEEEecchhHHHHHHHHH
Q 041117 80 LKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~ 100 (249)
..+..++|||.|=..|+.++.
T Consensus 75 ~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 75 PRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCcEEeecCHHHHHHHHHhC
Confidence 467899999999988887764
No 323
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=33.99 E-value=41 Score=26.28 Aligned_cols=21 Identities=33% Similarity=0.226 Sum_probs=17.2
Q ss_pred CCceEEEecchhHHHHHHHHH
Q 041117 80 LKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~ 100 (249)
..+-.++|||.|-..|+.++.
T Consensus 81 i~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 81 VRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CcccEEEecCHHHHHHHHHhC
Confidence 456799999999998887764
No 324
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.92 E-value=37 Score=25.95 Aligned_cols=18 Identities=33% Similarity=0.246 Sum_probs=16.0
Q ss_pred eEEEecchhHHHHHHHHH
Q 041117 83 CFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~ 100 (249)
-.+.|.|+|+.+|..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 325
>PLN02633 palmitoyl protein thioesterase family protein
Probab=33.17 E-value=1.3e+02 Score=24.11 Aligned_cols=38 Identities=21% Similarity=0.142 Sum_probs=26.0
Q ss_pred CcEEEEecCCCcchhhH-HHHHHHHHHC-CCceEEEEeCC
Q 041117 181 PATIVIVGGFDPLKDWQ-KRHYQGLKRH-GKEAYLIEYPN 218 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~-~~~~~~l~~~-~~~~~~~~~~~ 218 (249)
.|+.|+||-.|.....+ ..+.+.+... |..+..+.+.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~ 65 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGN 65 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECC
Confidence 46999999999988544 5566666543 45566555554
No 326
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=32.91 E-value=30 Score=26.79 Aligned_cols=39 Identities=8% Similarity=0.042 Sum_probs=25.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR 43 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 43 (249)
+|+||.+.| .-++........+...|-.+ |+.|.++.-+
T Consensus 55 ~~vlIv~eG---~DaAGKG~~I~~l~~~lDPR-g~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQA---MDAAGKDGTIRHVMSGVNPQ-GCQVTSFKAP 93 (264)
T ss_pred CcEEEEEEC---CCCCCchHHHHHHHHhcCCC-eeEEEeCCCC
Confidence 489999999 22344444355666666555 8999887543
No 327
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=32.79 E-value=1.6e+02 Score=24.14 Aligned_cols=19 Identities=16% Similarity=0.067 Sum_probs=15.3
Q ss_pred hHHHHHHHHhCCcEEEeec
Q 041117 23 DDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d 41 (249)
..|++..+.+.|+.|++++
T Consensus 102 AfWLKer~rd~gl~VvVVE 120 (509)
T KOG2853|consen 102 AFWLKERARDEGLNVVVVE 120 (509)
T ss_pred HHHHHHHhhcCCceEEEEe
Confidence 4578888888789999885
No 328
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=32.71 E-value=1.9e+02 Score=23.65 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=41.0
Q ss_pred hHHHHHHHHhCCcEEEeecCCCCC--------C----CCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 23 DDHCRRLAKEIPAVVISVNYRLAP--------E----NRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r~~~--------~----~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
..+++.|+++ |+.|.++-|..+. + +.-|...+.+..++..+++... .++=++|=.+
T Consensus 191 ~nIlr~L~~r-g~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~-----------~~iPifGICL 258 (368)
T COG0505 191 RNILRELVKR-GCRVTVVPADTSAEEILALNPDGIFLSNGPGDPAPLDYAIETIKELLG-----------TKIPIFGICL 258 (368)
T ss_pred HHHHHHHHHC-CCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCChhHHHHHHHHHHHHhc-----------cCCCeEEEcH
Confidence 4678999997 9999988776532 2 1234444677777777777663 2335778888
Q ss_pred hHHHHH
Q 041117 91 GGNLAH 96 (249)
Q Consensus 91 GG~~a~ 96 (249)
|=.+..
T Consensus 259 GHQlla 264 (368)
T COG0505 259 GHQLLA 264 (368)
T ss_pred HHHHHH
Confidence 776543
No 329
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=32.46 E-value=1.2e+02 Score=18.51 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=19.2
Q ss_pred CCCcEEEEecCCCcchhhH--HHHHHHHHH----CCCceEE
Q 041117 179 DIPATIVIVGGFDPLKDWQ--KRHYQGLKR----HGKEAYL 213 (249)
Q Consensus 179 ~~pP~li~~g~~D~~~~~~--~~~~~~l~~----~~~~~~~ 213 (249)
..||++++.+.+...++.+ +-+.+.+++ .|.++.+
T Consensus 37 ~~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~G~Pi~l 77 (80)
T PF14714_consen 37 TRPPTFVLFVNDPELLPESYKRYLENQLREAFGFEGVPIRL 77 (80)
T ss_dssp TTTTEEEEEES-CCC--HHHHHHHHHHHHHHH--TTS--EE
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCCceeEEE
Confidence 5589999999987777644 334444443 3555544
No 330
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=32.29 E-value=69 Score=25.81 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=14.2
Q ss_pred CceEEEecchhHHHHHHHH
Q 041117 81 KRCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a 99 (249)
+.=.++|-|.|++.+..+-
T Consensus 303 eeGll~G~SSGan~~aAl~ 321 (362)
T KOG1252|consen 303 EEGLLVGISSGANVAAALK 321 (362)
T ss_pred hhCeeecccchHHHHHHHH
Confidence 5568999999998765443
No 331
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=31.69 E-value=2.7e+02 Score=23.26 Aligned_cols=63 Identities=19% Similarity=0.267 Sum_probs=35.7
Q ss_pred CcEEEEecCCCcchh-hHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-Ch-hHHHHHHHHHHHhh
Q 041117 181 PATIVIVGGFDPLKD-WQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-HE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 181 pP~li~~g~~D~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~-~~~~~~~~~fl~~~ 245 (249)
.|++|++|.-|.... .-..+.+.+.+.|-. +..++.-||+....... .. ......+++|+...
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~--vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIA--MLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCE--EEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 368888888876442 224466777776654 44555445553321111 12 45556788888653
No 332
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=31.65 E-value=2.4e+02 Score=21.69 Aligned_cols=18 Identities=22% Similarity=0.401 Sum_probs=13.8
Q ss_pred ceEEEecchhHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVA 99 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a 99 (249)
-..+.|.|+|+.+.....
T Consensus 116 G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 116 GIILGGTSAGAAVMSDTM 133 (250)
T ss_pred CCeEEEccHHHHhcccce
Confidence 378999999998764443
No 333
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=31.62 E-value=91 Score=22.07 Aligned_cols=36 Identities=25% Similarity=0.064 Sum_probs=18.1
Q ss_pred CCCceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
...+|+++|-|..|..-+.++-. ....+..++-.+|
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~------~~~~I~~vvD~np 102 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGL------DNDLIDYVVDDNP 102 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--------TTTS--EEES-G
T ss_pred cCCEEEEECcchHHHHHHHHhCC------CcceeEEEEeCCh
Confidence 45789999999999877777643 1224666665544
No 334
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=31.12 E-value=1.5e+02 Score=19.15 Aligned_cols=46 Identities=9% Similarity=0.159 Sum_probs=26.2
Q ss_pred HHHHHHHHHHCCCceEEEEeCCCc-eeeeecCCCCh-hHHHHHHHHHHHh
Q 041117 197 QKRHYQGLKRHGKEAYLIEYPNAV-HGFYIFPELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 197 ~~~~~~~l~~~~~~~~~~~~~~~~-H~~~~~~~~~~-~~~~~~~~~fl~~ 244 (249)
+..|++.++..+.++++.... .+ ....+. +.+. +++-.++.+|+.+
T Consensus 13 AqaF~DYl~sqgI~~~i~~~~-~~~~~lwl~-de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 13 AQAFIDYLASQGIELQIEPEG-QGQFALWLH-DEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHTT--EEEE-SS-SE--EEEES--GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCeEEEEECC-CCceEEEEe-CHHHHHHHHHHHHHHHHC
Confidence 578999999998777776643 34 333332 2222 6666677777765
No 335
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.96 E-value=42 Score=25.73 Aligned_cols=20 Identities=25% Similarity=0.189 Sum_probs=17.0
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
.-.+.|-|+|+..+..++..
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 37 ARKIYGASAGALTATALVTG 56 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcC
Confidence 35688999999999998875
No 336
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.90 E-value=46 Score=25.59 Aligned_cols=20 Identities=20% Similarity=0.096 Sum_probs=17.3
Q ss_pred ceEEEecchhHHHHHHHHHH
Q 041117 82 RCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 82 ~i~l~G~S~GG~~a~~~a~~ 101 (249)
.-.+.|.|+|+.++..++..
T Consensus 33 ~~~i~GtSAGAl~aa~~asg 52 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSG 52 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhC
Confidence 45799999999999999874
No 337
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=30.88 E-value=3.1e+02 Score=23.30 Aligned_cols=44 Identities=18% Similarity=0.107 Sum_probs=25.6
Q ss_pred CCCcEEEEecCCCcch--hhHHHHHHHHHHCCCceEEEEeCCCcee
Q 041117 179 DIPATIVIVGGFDPLK--DWQKRHYQGLKRHGKEAYLIEYPNAVHG 222 (249)
Q Consensus 179 ~~pP~li~~g~~D~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 222 (249)
..|+++++||-.+.-. +....+.+++.....+.+++.++=.+|+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g 85 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRA 85 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcC
Confidence 3477999999876421 2233455555433334566666655665
No 338
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=30.41 E-value=1.3e+02 Score=19.69 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=22.8
Q ss_pred EEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC
Q 041117 5 VYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR 43 (249)
Q Consensus 5 v~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 43 (249)
|++||-. |+.. ..+++.++...++.++.++..
T Consensus 1 ill~G~~---G~GK----T~l~~~la~~l~~~~~~i~~~ 32 (132)
T PF00004_consen 1 ILLHGPP---GTGK----TTLARALAQYLGFPFIEIDGS 32 (132)
T ss_dssp EEEESST---TSSH----HHHHHHHHHHTTSEEEEEETT
T ss_pred CEEECcC---CCCe----eHHHHHHHhhccccccccccc
Confidence 6789822 3322 467888899889988888754
No 339
>COG5045 Ribosomal protein S10E [Translation, ribosomal structure and biogenesis]
Probab=29.87 E-value=79 Score=19.84 Aligned_cols=56 Identities=14% Similarity=0.056 Sum_probs=36.5
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 24 DHCRRLAKEIPAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 24 ~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
.+-++|.++ |..|.-=|+.+.........--.+..+++.+.... -...++.|+||.
T Consensus 10 kIhq~Lf~~-gv~vakkDfnl~kH~el~ipNL~vika~qsl~S~G----------Yvkt~~~W~~~Y 65 (105)
T COG5045 10 KIHQRLFQK-GVAVAKKDFNLGKHRELEIPNLHVIKAMQSLISYG----------YVKTIHVWRHSY 65 (105)
T ss_pred HHHHHHHHh-hhhHhhhhccccCCcccCCCchHHHHHHHHHhhcc----------eeEEEeeeeeeE
Confidence 345667775 88887777766544444444455666777666554 246899999996
No 340
>PRK03204 haloalkane dehalogenase; Provisional
Probab=29.77 E-value=2.6e+02 Score=21.70 Aligned_cols=59 Identities=12% Similarity=0.038 Sum_probs=33.0
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-Ch--hHHHHHHHHHHH
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-HE--GSFIDDVGNFIR 243 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~--~~~~~~~~~fl~ 243 (249)
||++++||..+.... =..+...+. ...+++.++--||+....+.. .. +.+.+.+.++++
T Consensus 35 ~~iv~lHG~~~~~~~-~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 96 (286)
T PRK03204 35 PPILLCHGNPTWSFL-YRDIIVALR---DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVD 96 (286)
T ss_pred CEEEEECCCCccHHH-HHHHHHHHh---CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 679999998643221 123334443 246788888888875533211 11 445555555554
No 341
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=29.54 E-value=2.3e+02 Score=20.88 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=33.3
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~ 244 (249)
||++++||-....... ..+...++ +.+++.++--||+....+.... +.+.+.+.+++++
T Consensus 3 p~vvllHG~~~~~~~w-~~~~~~l~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~ 62 (242)
T PRK11126 3 PWLVFLHGLLGSGQDW-QPVGEALP----DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS 62 (242)
T ss_pred CEEEEECCCCCChHHH-HHHHHHcC----CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH
Confidence 6799999986543321 23334442 3566666666665433222223 6777777777764
No 342
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=28.90 E-value=2.1e+02 Score=22.13 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=36.8
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCC--------CCh-hHHHHHHHHHHHhh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPE--------LHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--------~~~-~~~~~~~~~fl~~~ 245 (249)
||++++||....... =..+...+.+. .+++.++--||+....+. .-. +.+.+++.++++..
T Consensus 30 ~~vlllHG~~~~~~~-w~~~~~~L~~~---~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l 99 (294)
T PLN02824 30 PALVLVHGFGGNADH-WRKNTPVLAKS---HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV 99 (294)
T ss_pred CeEEEECCCCCChhH-HHHHHHHHHhC---CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh
Confidence 679999998764332 12344555543 366667766777543221 112 77788888888753
No 343
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=28.80 E-value=2.3e+02 Score=22.66 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.2
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
|.++++=| .+++. -...+-.||++.|.-|++.|
T Consensus 3 ~~~i~I~G---PTAsG----KT~lai~LAk~~~~eIIs~D 35 (308)
T COG0324 3 PKLIVIAG---PTASG----KTALAIALAKRLGGEIISLD 35 (308)
T ss_pred ccEEEEEC---CCCcC----HHHHHHHHHHHcCCcEEecc
Confidence 55677777 12222 24577889999999999998
No 344
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=28.37 E-value=3.8e+02 Score=24.63 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=21.7
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
-|+++||-. |-. -..++.-+|.+.||.|+-+|
T Consensus 327 KilLL~Gpp---GlG----KTTLAHViAkqaGYsVvEIN 358 (877)
T KOG1969|consen 327 KILLLCGPP---GLG----KTTLAHVIAKQAGYSVVEIN 358 (877)
T ss_pred ceEEeecCC---CCC----hhHHHHHHHHhcCceEEEec
Confidence 378999922 111 13456667888899999887
No 345
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=28.06 E-value=43 Score=25.37 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=25.2
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYR 43 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 43 (249)
.|+||.+.| ..++........+...|-.+ |+.|.++.-+
T Consensus 30 ~~vlIv~eG---~DaAGKg~~I~~l~~~lDPR-g~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEG---RDAAGKGGTIKRITEHLNPR-GARVVALPKP 68 (230)
T ss_pred CCEEEEEeC---CCCCCchHHHHHHHHhcCCC-eeEEEeCCCC
Confidence 489999999 22344443355566666555 8888887644
No 346
>PRK00131 aroK shikimate kinase; Reviewed
Probab=28.04 E-value=75 Score=22.22 Aligned_cols=34 Identities=21% Similarity=0.087 Sum_probs=23.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY 42 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~ 42 (249)
|.+|++.|- .|+.. ..+++.|+++.|+.++..|.
T Consensus 4 ~~~i~l~G~---~GsGK----stla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGF---MGAGK----STIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcC---CCCCH----HHHHHHHHHHhCCCEEEChH
Confidence 467888882 24433 46788899988988877663
No 347
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=28.03 E-value=1.4e+02 Score=22.95 Aligned_cols=8 Identities=50% Similarity=1.277 Sum_probs=6.7
Q ss_pred EEEEecCc
Q 041117 4 IVYFHGGG 11 (249)
Q Consensus 4 vv~~HGgg 11 (249)
+|++||||
T Consensus 27 ~VlVHGgg 34 (257)
T cd04251 27 LIVVHGGG 34 (257)
T ss_pred EEEECCCH
Confidence 68999976
No 348
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=28.03 E-value=2.4e+02 Score=23.40 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=34.3
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCC--CCh-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPE--LHE-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--~~~-~~~~~~~~~fl~~ 244 (249)
++++++||-.+.... -..+++.+.+.| ..++.++--||+...... ... +.+.+++.++++.
T Consensus 137 ~~Vl~lHG~~~~~~~-~~~~a~~L~~~G--y~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~ 200 (395)
T PLN02652 137 GILIIIHGLNEHSGR-YLHFAKQLTSCG--FGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEK 200 (395)
T ss_pred eEEEEECCchHHHHH-HHHHHHHHHHCC--CEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 568999998764321 245667776655 456666666776432110 112 4555666655553
No 349
>PF13728 TraF: F plasmid transfer operon protein
Probab=27.65 E-value=1.8e+02 Score=21.78 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=25.7
Q ss_pred cchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchh
Q 041117 20 KRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYD 55 (249)
Q Consensus 20 ~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~ 55 (249)
....+.++.++++.|+.|+.++.-|.+-..++....
T Consensus 136 ~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~ 171 (215)
T PF13728_consen 136 QQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRP 171 (215)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCC
Confidence 335788999999999999888766554445555543
No 350
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=27.62 E-value=1.5e+02 Score=21.12 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=39.4
Q ss_pred EEEEecCCCcchhh-HHHHHHHHHHCCCceEEEEeCC-----CceeeeecCCCCh--hHHHHHHHHHHHhhh
Q 041117 183 TIVIVGGFDPLKDW-QKRHYQGLKRHGKEAYLIEYPN-----AVHGFYIFPELHE--GSFIDDVGNFIRDQS 246 (249)
Q Consensus 183 ~li~~g~~D~~~~~-~~~~~~~l~~~~~~~~~~~~~~-----~~H~~~~~~~~~~--~~~~~~~~~fl~~~~ 246 (249)
+||++++.|.-... +...+..|++.|.++++.-... .+|--...-.-+. ..+-+.+-+|+.++.
T Consensus 3 ~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~ 74 (175)
T COG4635 3 TLILYSTRDGQTRKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHA 74 (175)
T ss_pred eEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHH
Confidence 89999999986643 4677888888887777665432 1221000000011 566777788887763
No 351
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=27.61 E-value=51 Score=26.29 Aligned_cols=22 Identities=41% Similarity=0.357 Sum_probs=18.8
Q ss_pred CCCceEEEecchhHHHHHHHHH
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~ 100 (249)
+..+.++.|||.|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4577899999999999888776
No 352
>PF15466 DUF4635: Domain of unknown function (DUF4635)
Probab=27.61 E-value=76 Score=20.94 Aligned_cols=14 Identities=14% Similarity=0.434 Sum_probs=7.0
Q ss_pred hHHHHHHHHHHHhh
Q 041117 232 GSFIDDVGNFIRDQ 245 (249)
Q Consensus 232 ~~~~~~~~~fl~~~ 245 (249)
++-++.+..||++.
T Consensus 82 eEPik~~r~WLken 95 (135)
T PF15466_consen 82 EEPIKAIRNWLKEN 95 (135)
T ss_pred cchHHHHHHHHHHH
Confidence 44455555555543
No 353
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=27.38 E-value=3.3e+02 Score=22.24 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=49.0
Q ss_pred CCEEEEEecCccccCCCC----ccchhHHHHHHHHhCCcEEEeecCCCCCCCC-------------CCCchhhHHHHHHH
Q 041117 1 LPVIVYFHGGGFVLLAAN----SKRYDDHCRRLAKEIPAVVISVNYRLAPENR-------------YPSQYDDGIDVLKF 63 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~----~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------------~~~~~~d~~~~~~~ 63 (249)
+|+|+|++--|-..-... ....-..+.+++...|..++-..|++..+.. -....+...+.+++
T Consensus 193 lPlv~~~YpRG~~i~~~~d~~~~~d~Ia~AaRiaaELGADIVKv~yp~~~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~ 272 (348)
T PRK09250 193 LATVLWSYLRNSAFKKDGDYHTAADLTGQANHLAATIGADIIKQKLPTNNGGYKAINFGKTDDRVYSKLTSDHPIDLVRY 272 (348)
T ss_pred CCEEEEecccCcccCCcccccccHHHHHHHHHHHHHHcCCEEEecCCCChhhHHHhhcccccccccccccccchHHHHHH
Confidence 588887777442211111 1224556788888889999999998653320 11224455566666
Q ss_pred HHhhccCCCCCCCccCCCceEEEecchhH
Q 041117 64 IDTKISTVEDFPACADLKRCFVAGDSAGG 92 (249)
Q Consensus 64 l~~~~~~~~~~~~~~~~~~i~l~G~S~GG 92 (249)
+.+... .++-++++.|-+.-+
T Consensus 273 ~V~ac~--------ag~vpVviAGG~k~~ 293 (348)
T PRK09250 273 QVANCY--------MGRRGLINSGGASKG 293 (348)
T ss_pred HHHhhc--------cCCceEEEeCCCCCC
Confidence 665431 134677777777654
No 354
>PRK14429 acylphosphatase; Provisional
Probab=27.23 E-value=1.6e+02 Score=18.36 Aligned_cols=46 Identities=7% Similarity=-0.075 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHhh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~ 67 (249)
|+++..++|.+.|..-.+-|.... =+......-+++.+++.+|.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~g 63 (90)
T PRK14429 17 CRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVG 63 (90)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhC
Confidence 789999999999988877765421 1222344556777888888754
No 355
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=27.14 E-value=2.2e+02 Score=25.16 Aligned_cols=44 Identities=18% Similarity=0.083 Sum_probs=35.0
Q ss_pred CcEEEEecCCCcchh---hHHHHHHHHHHCCCceEEEEeCCCceeee
Q 041117 181 PATIVIVGGFDPLKD---WQKRHYQGLKRHGKEAYLIEYPNAVHGFY 224 (249)
Q Consensus 181 pP~li~~g~~D~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 224 (249)
-|++|..|.+|.-.+ .-.+++++-.+...+..++.|+.+|-.+.
T Consensus 899 ~P~FI~~~~~dI~TECKApEKEfaErqt~R~RPaRLIFYD~~G~~~G 945 (1034)
T KOG4150|consen 899 VPTFITCNYSDIATECKAPEKEFAERQTQRYRPARLIFYDPGGTGIG 945 (1034)
T ss_pred cceEEecCchhhcccCCCchHHHHHhhhhccCcceEEEEcCCCCccc
Confidence 389999999996552 34788888888888999999998876543
No 356
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=26.94 E-value=3e+02 Score=22.28 Aligned_cols=60 Identities=13% Similarity=0.220 Sum_probs=34.6
Q ss_pred CcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-C-h-hHHHHHHHHHHHh
Q 041117 181 PATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-H-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 181 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~-~-~~~~~~~~~fl~~ 244 (249)
||++++||-....... ..+...+.+ ..+++.++--||+....+.. . . +.+.+.+.++++.
T Consensus 89 p~lvllHG~~~~~~~w-~~~~~~L~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 89 PPVLLVHGFGASIPHW-RRNIGVLAK---NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE 151 (360)
T ss_pred CeEEEECCCCCCHHHH-HHHHHHHhc---CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH
Confidence 6799999986543211 223344432 45677777777775432211 1 1 6677777777764
No 357
>PRK06852 aldolase; Validated
Probab=26.78 E-value=3.3e+02 Score=21.76 Aligned_cols=44 Identities=16% Similarity=0.161 Sum_probs=23.7
Q ss_pred CCEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecCCC
Q 041117 1 LPVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNYRL 44 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~ 44 (249)
+|+|++++--|-..-.......-..+.+++...|..++-.+|++
T Consensus 168 lPll~~~yprG~~i~~~~~~~~ia~aaRiaaELGADIVKv~y~~ 211 (304)
T PRK06852 168 LIAVLWIYPRGKAVKDEKDPHLIAGAAGVAACLGADFVKVNYPK 211 (304)
T ss_pred CcEEEEeeccCcccCCCccHHHHHHHHHHHHHHcCCEEEecCCC
Confidence 47776666533211111121234455666667787777777764
No 358
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=26.75 E-value=2.8e+02 Score=22.21 Aligned_cols=61 Identities=15% Similarity=-0.002 Sum_probs=34.2
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC-Ch-hHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL-HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~-~~~~~~~~~fl~~ 244 (249)
.||++++||-...... -..+.+.+.+ ...++.++.-||+....... .. +.+.+.+.+++++
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHAALAA---GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA 193 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHHHHhc---CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 4679999986543322 1233344443 36777788888875522211 12 6666666666643
No 359
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=26.31 E-value=1.1e+02 Score=24.33 Aligned_cols=65 Identities=15% Similarity=0.149 Sum_probs=40.1
Q ss_pred cEEEEecCCCcchh--hHHHHHHHHHHCC-CceEEEEeCCCceeeeecCCCCh-hHHHHHHHHHHHhhhc
Q 041117 182 ATIVIVGGFDPLKD--WQKRHYQGLKRHG-KEAYLIEYPNAVHGFYIFPELHE-GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 182 P~li~~g~~D~~~~--~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~fl~~~~~ 247 (249)
-++-+-|+.|.+-. +.+...+...... .....+.-++.|| +..++...= ++...++.+|+.++-+
T Consensus 341 aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGH-YGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGH-YGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred eEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCc-cceeccchHHHHHHHHHHHHHHHhCc
Confidence 47788999998763 2222222222111 1235667889999 555554433 7888899999988644
No 360
>TIGR02578 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 family. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2. A typical example is TM1811 from Thermotoga maritima. CRISPR are Clustered Regularly Interspaced Short Palindromic Repeats. This protein family belongs to a conserved gene cluster regularly found near CRISPR repeats.
Probab=26.19 E-value=1.6e+02 Score=26.34 Aligned_cols=43 Identities=9% Similarity=0.138 Sum_probs=32.1
Q ss_pred HHCCCceEEEEeCCCceeeeecCCCCh---hHHHHHHHHHHHhhhc
Q 041117 205 KRHGKEAYLIEYPNAVHGFYIFPELHE---GSFIDDVGNFIRDQSA 247 (249)
Q Consensus 205 ~~~~~~~~~~~~~~~~H~~~~~~~~~~---~~~~~~~~~fl~~~~~ 247 (249)
.+.+-+..-.+|.++||.+.+.+..++ +++-+++-+||-+.+.
T Consensus 291 ~~l~L~~~nil~~gGG~F~lLlPnt~~~~l~~~~~~in~~l~~~f~ 336 (648)
T TIGR02578 291 EELNLTRTNILFDGGGHFYLLLPNTEEARLEKLRERIEEELLKEFR 336 (648)
T ss_pred HHcCCChhheEEecCCeEEEEecCChHHHHHHHHHHHHHHHHHhcC
Confidence 345656667788999999888887765 6777777788776654
No 361
>PRK13936 phosphoheptose isomerase; Provisional
Probab=26.15 E-value=1.8e+02 Score=21.35 Aligned_cols=40 Identities=5% Similarity=0.096 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHhc
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
+.+.++++.+.+.. .+..+|+++|....+.+|..++.+..
T Consensus 27 ~~i~~a~~~~~~~l---------~~a~~I~i~G~G~S~~~A~~~~~~l~ 66 (197)
T PRK13936 27 PPIAQAVELMVQAL---------LNEGKILACGNGGSAADAQHFSAELL 66 (197)
T ss_pred HHHHHHHHHHHHHH---------HCCCEEEEEeCcHhHHHHHHHHHHcc
Confidence 33445555555555 36689999999998999988887653
No 362
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=25.98 E-value=1.2e+02 Score=23.09 Aligned_cols=37 Identities=24% Similarity=0.099 Sum_probs=16.4
Q ss_pred EEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 3 VIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 3 ~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
+||++|.|.-....+. .....+++.+.+. |..++.-.
T Consensus 187 vIv~~HwG~e~~~~p~-~~q~~~a~~lida-GaDiIiG~ 223 (250)
T PF09587_consen 187 VIVSLHWGIEYENYPT-PEQRELARALIDA-GADIIIGH 223 (250)
T ss_pred EEEEeccCCCCCCCCC-HHHHHHHHHHHHc-CCCEEEeC
Confidence 4566666543222221 1134455555553 55555443
No 363
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.91 E-value=39 Score=24.01 Aligned_cols=32 Identities=19% Similarity=0.097 Sum_probs=23.0
Q ss_pred CceEEEecchhHHHHHHHHHHhcccccccccccccccccc
Q 041117 81 KRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIPIQP 120 (249)
Q Consensus 81 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 120 (249)
+.+.++.+|||-++|-.+.... +++..+.+++
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~--------~lksatAiNG 88 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGI--------RLKSATAING 88 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhc--------cccceeeecC
Confidence 5688999999999987776543 5555555544
No 364
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=25.84 E-value=1.1e+02 Score=21.60 Aligned_cols=50 Identities=12% Similarity=0.146 Sum_probs=36.2
Q ss_pred CcEEEeecCCCCCCCCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHH
Q 041117 34 PAVVISVNYRLAPENRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLA 95 (249)
Q Consensus 34 g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a 95 (249)
.-+++++|+.|.-. ...++.+++-+..+...+. +.+.|.|-=.|.||.+-
T Consensus 97 ~~r~~VldF~Gdi~---A~~v~~LReeisail~~a~---------~~DeV~~rLES~GG~Vh 146 (155)
T PF08496_consen 97 KPRLFVLDFKGDIK---ASEVESLREEISAILSVAT---------PEDEVLVRLESPGGMVH 146 (155)
T ss_pred CCeEEEEecCCCcc---HHHHHHHHHHHHHHHHhCC---------CCCeEEEEEecCCceee
Confidence 46788888877433 3456677777777777664 45889999999999763
No 365
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.71 E-value=1.1e+02 Score=20.38 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHH
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLA 95 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a 95 (249)
.++...+.+..... +.+.++++|||--|.+.
T Consensus 43 ~~~~~sl~~av~~l----------~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 43 LDVLASLEYAVEVL----------GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred ccHHHHHHHHHHhh----------CCCEEEEEccCCCcHHH
Confidence 45777788777665 56899999997666554
No 366
>PRK13948 shikimate kinase; Provisional
Probab=25.68 E-value=96 Score=22.47 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=24.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeecC
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVNY 42 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~ 42 (249)
|..|++.| ..|+.. ....+.|+++.|+.++..|.
T Consensus 10 ~~~I~LiG---~~GsGK----STvg~~La~~lg~~~iD~D~ 43 (182)
T PRK13948 10 VTWVALAG---FMGTGK----SRIGWELSRALMLHFIDTDR 43 (182)
T ss_pred CCEEEEEC---CCCCCH----HHHHHHHHHHcCCCEEECCH
Confidence 46788888 334443 35778888888999998884
No 367
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=25.67 E-value=1.2e+02 Score=27.62 Aligned_cols=21 Identities=29% Similarity=0.332 Sum_probs=17.8
Q ss_pred CCceEEEecchhHHHHHHHHH
Q 041117 80 LKRCFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 80 ~~~i~l~G~S~GG~~a~~~a~ 100 (249)
..--+|.|.|+||.++..+|.
T Consensus 65 ~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 65 VRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCceEEeeCHHHHHHHHHHc
Confidence 344589999999999999996
No 368
>PRK13938 phosphoheptose isomerase; Provisional
Probab=24.87 E-value=2.1e+02 Score=21.09 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=22.2
Q ss_pred CCCceEEEecchhHHHHHHHHHHhc
Q 041117 79 DLKRCFVAGDSAGGNLAHNVAVRAN 103 (249)
Q Consensus 79 ~~~~i~l~G~S~GG~~a~~~a~~~~ 103 (249)
...+|+++|....|.+|..++.++.
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5589999999999999999998863
No 369
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=24.83 E-value=3.5e+02 Score=22.39 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=37.7
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC----C-h-hHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL----H-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~----~-~-~~~~~~~~~fl~~ 244 (249)
.||++++||-....... ..+...+.+ ..+++.++--||+....+.. . . +.+.+.+.+|+++
T Consensus 127 ~~~ivllHG~~~~~~~w-~~~~~~L~~---~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSY-RKVLPVLSK---NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred CCeEEEECCCCCCHHHH-HHHHHHHhc---CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH
Confidence 36799999987543321 234445543 46777888778876543321 1 2 6777778877765
No 370
>KOG4584 consensus Uncharacterized conserved protein [General function prediction only]
Probab=24.68 E-value=1e+02 Score=24.43 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=31.0
Q ss_pred cEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeee
Q 041117 182 ATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFY 224 (249)
Q Consensus 182 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 224 (249)
++|+.+...|.-+=+-+++.+.+.....+..+++++|+|-.+.
T Consensus 271 ~ll~~~~G~~~pciDlrrvsqeLa~l~~daDLVViEGMGRalh 313 (348)
T KOG4584|consen 271 QLLVVQNGQDSPCIDLRRVSQELAYLSSDADLVVIEGMGRALH 313 (348)
T ss_pred ceEEeecCCCCceeeHHhhhHHHHHHhcCCCEEEEeccchhhh
Confidence 6888888888555335556666666555899999999996544
No 371
>PRK14450 acylphosphatase; Provisional
Probab=24.42 E-value=1.9e+02 Score=18.10 Aligned_cols=45 Identities=16% Similarity=0.170 Sum_probs=31.2
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCCC--CCCCCCchhhHHHHHHHHHh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLAP--ENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~~--~~~~~~~~~d~~~~~~~l~~ 66 (249)
|+.++.++|.++|..-.+-|..-.. +......-+++..++++|.+
T Consensus 17 FR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~~ 63 (91)
T PRK14450 17 FRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLRS 63 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhh
Confidence 7899999999999888877654221 11234445677788888864
No 372
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=24.41 E-value=1.1e+02 Score=21.86 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=16.2
Q ss_pred hHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 56 DGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 56 d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
++..+++.+.+... +.+..++++|.|.
T Consensus 2 q~~~~~~El~~~a~--------l~~g~i~VvGcST 28 (172)
T PF04260_consen 2 QLRQALEELLEQAN--------LKPGQIFVVGCST 28 (172)
T ss_dssp -HHHHHHHHHHHS-----------TT-EEEEEE-H
T ss_pred hHHHHHHHHHHhcC--------CCCCCEEEEeeeH
Confidence 45667777776664 6778999999995
No 373
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=24.29 E-value=1.6e+02 Score=21.56 Aligned_cols=33 Identities=18% Similarity=0.465 Sum_probs=23.8
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
|.|||+=||. ||.. .....++++++||.=++..
T Consensus 8 ~~IifVlGGP---GsgK----gTqC~kiv~ky~ftHlSaG 40 (195)
T KOG3079|consen 8 PPIIFVLGGP---GSGK----GTQCEKIVEKYGFTHLSAG 40 (195)
T ss_pred CCEEEEEcCC---CCCc----chHHHHHHHHcCceeecHH
Confidence 6788898876 4433 4678999999887765543
No 374
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.25 E-value=3.8e+02 Score=22.72 Aligned_cols=36 Identities=31% Similarity=0.286 Sum_probs=29.2
Q ss_pred cCCCceEEEecchhHHHHHHHHHHhccccccccccccccc
Q 041117 78 ADLKRCFVAGDSAGGNLAHNVAVRANECKFSKLKLIGVIP 117 (249)
Q Consensus 78 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 117 (249)
+.|+.+.++=.||=|.-|...|..+.+. ..+.|+|+
T Consensus 211 ~~P~E~llVvDam~GQdA~~~A~aF~e~----l~itGvIl 246 (451)
T COG0541 211 INPDETLLVVDAMIGQDAVNTAKAFNEA----LGITGVIL 246 (451)
T ss_pred cCCCeEEEEEecccchHHHHHHHHHhhh----cCCceEEE
Confidence 4788999999999999999999987643 35677766
No 375
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=23.89 E-value=3.4e+02 Score=20.91 Aligned_cols=63 Identities=10% Similarity=-0.045 Sum_probs=34.6
Q ss_pred CCCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC--Ch-hHHHHHHHHHHHh
Q 041117 179 DIPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL--HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 179 ~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~-~~~~~~~~~fl~~ 244 (249)
..|+++++||-...... =..+...+++.+- +.+.++--||+....... .. +...+.+.++++.
T Consensus 17 ~~p~vvliHG~~~~~~~-w~~~~~~L~~~g~--~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 17 QPPHFVLIHGISGGSWC-WYKIRCLMENSGY--KVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CCCeEEEECCCCCCcCc-HHHHHHHHHhCCC--EEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHh
Confidence 34679999997653221 1345566765554 444555456653211111 12 6667777777765
No 376
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=23.70 E-value=3.8e+02 Score=21.31 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=20.7
Q ss_pred EEEEEec-CccccCCCCccchhHHHHHHHHhCCcEEEee
Q 041117 3 VIVYFHG-GGFVLLAANSKRYDDHCRRLAKEIPAVVISV 40 (249)
Q Consensus 3 ~vv~~HG-gg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~ 40 (249)
.++++|| || |..+. ..+.+.+++++.|..++++
T Consensus 87 ~v~i~aglGG---GTGSG--~ap~ia~~a~e~g~~~~~v 120 (304)
T cd02201 87 MVFITAGMGG---GTGTG--AAPVIAKIAKEMGALTVAV 120 (304)
T ss_pred EEEEeeccCC---Ccchh--HHHHHHHHHHHcCCCEEEE
Confidence 5788998 44 22222 4566788888877655554
No 377
>PRK14440 acylphosphatase; Provisional
Probab=23.57 E-value=1.9e+02 Score=18.08 Aligned_cols=46 Identities=11% Similarity=-0.060 Sum_probs=30.9
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHhh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~ 67 (249)
|+.+..+.|.+.|..-.+-|.... =+......-+++..+++++.+.
T Consensus 18 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~g 64 (90)
T PRK14440 18 FRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQG 64 (90)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhC
Confidence 688999999999988877665432 1112333446677888888743
No 378
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=23.54 E-value=3e+02 Score=20.16 Aligned_cols=61 Identities=13% Similarity=0.030 Sum_probs=33.4
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCC--Ch-hHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPEL--HE-GSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~-~~~~~~~~~fl~~ 244 (249)
.|+++++||-...... -....+.+.+ ...++.++--||+....... .. +...+.+.++++.
T Consensus 13 ~~~iv~lhG~~~~~~~-~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 13 APVVVLSSGLGGSGSY-WAPQLDVLTQ---RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CCEEEEEcCCCcchhH-HHHHHHHHHh---ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 4678999987653221 1223334432 35667777667765432211 12 6667777777754
No 379
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family. This subfamily of the adenylate kinase superfamily contains examples of UMP-CMP kinase, as well as others proteins with unknown specificity, some currently designated adenylate kinase. All known members are eukaryotic.
Probab=23.49 E-value=1.1e+02 Score=21.80 Aligned_cols=31 Identities=16% Similarity=0.430 Sum_probs=21.7
Q ss_pred EEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 4 IVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 4 vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
||++.|.. ||.. ..+++.|+++.|+..+..+
T Consensus 1 ~i~i~G~p---GsGK----st~a~~la~~~~~~~is~~ 31 (183)
T TIGR01359 1 VVFVLGGP---GSGK----GTQCAKIVENFGFTHLSAG 31 (183)
T ss_pred CEEEECCC---CCCH----HHHHHHHHHHcCCeEEECC
Confidence 46777733 4433 3578889998899888874
No 380
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=23.48 E-value=95 Score=23.77 Aligned_cols=8 Identities=38% Similarity=0.800 Sum_probs=6.5
Q ss_pred EEEEecCc
Q 041117 4 IVYFHGGG 11 (249)
Q Consensus 4 vv~~HGgg 11 (249)
+|++||||
T Consensus 31 ~VlVHGgg 38 (248)
T cd04252 31 PIVVHGAG 38 (248)
T ss_pred EEEEeCCC
Confidence 48999976
No 381
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=23.37 E-value=1.9e+02 Score=21.13 Aligned_cols=41 Identities=10% Similarity=0.010 Sum_probs=31.7
Q ss_pred chhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 53 QYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 53 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
..+.+..+++++.+... ...+|+++|....+.+|..++...
T Consensus 26 ~~~~i~~a~~~i~~al~---------~~~rI~i~G~G~S~~~A~~~a~~l 66 (192)
T PRK00414 26 NIHAIQRAAVLIADSFK---------AGGKVLSCGNGGSHCDAMHFAEEL 66 (192)
T ss_pred hHHHHHHHHHHHHHHHH---------CCCEEEEEeCcHHHHHHHHHHHHh
Confidence 33566777777776653 568999999999999999998664
No 382
>PLN02200 adenylate kinase family protein
Probab=23.36 E-value=1.5e+02 Score=22.45 Aligned_cols=33 Identities=18% Similarity=0.439 Sum_probs=23.5
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEeec
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISVN 41 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 41 (249)
|.+|++.|.. |+.. ..+++.|+++.|+..+..+
T Consensus 43 ~~ii~I~G~P---GSGK----sT~a~~La~~~g~~his~g 75 (234)
T PLN02200 43 PFITFVLGGP---GSGK----GTQCEKIVETFGFKHLSAG 75 (234)
T ss_pred CEEEEEECCC---CCCH----HHHHHHHHHHhCCeEEEcc
Confidence 6788999843 4433 3567888988898777663
No 383
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=23.26 E-value=3.7e+02 Score=21.01 Aligned_cols=46 Identities=22% Similarity=0.316 Sum_probs=27.6
Q ss_pred CCEEEEEecCccccCC--CCccchhHHHHHHHHhCCcEEEeecCCCCC
Q 041117 1 LPVIVYFHGGGFVLLA--ANSKRYDDHCRRLAKEIPAVVISVNYRLAP 46 (249)
Q Consensus 1 ~P~vv~~HGgg~~~g~--~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~ 46 (249)
.|+|+|..+-|..... ......-..+.+++...|..++-.+|.+++
T Consensus 144 mp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaaelGADIiK~~ytg~~ 191 (265)
T COG1830 144 MPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAELGADIIKTKYTGDP 191 (265)
T ss_pred CceEEEEeccCCcccccccccHHHHHHHHHHHHHhcCCeEeecCCCCh
Confidence 3777777775543222 122223445667777778888888887765
No 384
>PRK14436 acylphosphatase; Provisional
Probab=23.20 E-value=2e+02 Score=18.03 Aligned_cols=45 Identities=9% Similarity=-0.005 Sum_probs=31.1
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~ 66 (249)
|+.+..++|.+.|..-.+-|..-. =+-.....-+++.+++++|.+
T Consensus 19 FR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (91)
T PRK14436 19 FRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQ 64 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhh
Confidence 789999999999988887775421 112233445667778888764
No 385
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=23.19 E-value=1.9e+02 Score=22.92 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
+.+..+++.+.+... ...+++++|...-|.++...+..
T Consensus 46 ~~I~~av~~~~~~l~---------~ggrI~~~GaGtSg~la~~da~e 83 (299)
T PRK05441 46 PQIAAAVDAAAAALR---------QGGRLIYIGAGTSGRLGVLDASE 83 (299)
T ss_pred HHHHHHHHHHHHHHH---------CCCEEEEEcCcHHHHHHHHHHHh
Confidence 445555555555542 56789999999999999666654
No 386
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=23.17 E-value=4.6e+02 Score=22.13 Aligned_cols=28 Identities=14% Similarity=0.105 Sum_probs=23.6
Q ss_pred CCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 75 PACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 75 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+...+++++++.+.+.+++-+++..+..
T Consensus 141 ~v~fdP~~~Vv~~G~T~ane~l~fcLad 168 (471)
T KOG0256|consen 141 RVKFDPERVVVTNGATSANETLMFCLAD 168 (471)
T ss_pred CCccCccceEEecccchhhHHHHHHhcC
Confidence 4457999999999999999998888763
No 387
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=23.17 E-value=1.2e+02 Score=21.67 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=14.4
Q ss_pred hhHHHHHHHHhCCcEEEeecC
Q 041117 22 YDDHCRRLAKEIPAVVISVNY 42 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~ 42 (249)
-..++..++. .|+.|+.+|.
T Consensus 16 a~~la~~la~-~g~~VlliD~ 35 (195)
T PF01656_consen 16 AANLAQALAR-KGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHH-TTS-EEEEEE
T ss_pred HHHHHhcccc-cccccccccc
Confidence 3566777777 5999999985
No 388
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.15 E-value=75 Score=26.18 Aligned_cols=19 Identities=42% Similarity=0.373 Sum_probs=16.6
Q ss_pred eEEEecchhHHHHHHHHHH
Q 041117 83 CFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~~ 101 (249)
-.+.|.|+|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4699999999999988874
No 389
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=22.93 E-value=2.4e+02 Score=21.83 Aligned_cols=55 Identities=18% Similarity=0.187 Sum_probs=29.0
Q ss_pred HHHHHHhCCcEEEeecCCCCCCCC-----CCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEE
Q 041117 26 CRRLAKEIPAVVISVNYRLAPENR-----YPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFV 85 (249)
Q Consensus 26 ~~~l~~~~g~~v~~~d~r~~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l 85 (249)
+-.++++.|+.++....++.|+.. +....++....++...+.+. ..+++.+++++
T Consensus 112 ~~~l~~~~~~~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~Gi~~~~Ii~ 171 (257)
T cd00739 112 MLEVAAEYGAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAE-----SAGVARNRIIL 171 (257)
T ss_pred HHHHHHHcCCCEEEECCCCCCcccccCCCcccHHHHHHHHHHHHHHHHH-----HcCCCHHHEEE
Confidence 344556678888888766655431 23334455455444444432 34455445543
No 390
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=22.93 E-value=1.5e+02 Score=24.58 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=43.9
Q ss_pred hHHHHHHHHhCCcEEEeecCC------------CCCC------CCCCC---chhhHHHHHHHHHhhccCCCCCCCccCCC
Q 041117 23 DDHCRRLAKEIPAVVISVNYR------------LAPE------NRYPS---QYDDGIDVLKFIDTKISTVEDFPACADLK 81 (249)
Q Consensus 23 ~~~~~~l~~~~g~~v~~~d~r------------~~~~------~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (249)
..+.+.|.++.||.++++.-- +..+ ..+.. -.+++.+.+.||++... ... ...
T Consensus 65 ~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr~~~v~~lv~wlr~~na-----~r~-~~~ 138 (405)
T COG2312 65 ARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWRRAEVRDLVEWLREFNA-----ARS-AGP 138 (405)
T ss_pred HHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhhHHHHHHHHHHHHHHhc-----cCC-ccc
Confidence 567899999999999998521 1110 01111 24689999999998764 222 235
Q ss_pred ceEEEec---chhHHHHHHHHH
Q 041117 82 RCFVAGD---SAGGNLAHNVAV 100 (249)
Q Consensus 82 ~i~l~G~---S~GG~~a~~~a~ 100 (249)
++.++|. +++|.++...+.
T Consensus 139 ~~~f~g~D~~~~n~~~~~~~~~ 160 (405)
T COG2312 139 QVGFYGFDAQMENGSAAALRAY 160 (405)
T ss_pred ccceeeccccccccchHHHHhh
Confidence 5667765 455555554443
No 391
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=22.50 E-value=4e+02 Score=21.21 Aligned_cols=92 Identities=22% Similarity=0.213 Sum_probs=52.0
Q ss_pred CCEEEEEecCcc--------ccCCCCccchhHHH--HHHHHhCCcEEEe-ecCCCC-CCCC--CCCchhhHHHHHHHHHh
Q 041117 1 LPVIVYFHGGGF--------VLLAANSKRYDDHC--RRLAKEIPAVVIS-VNYRLA-PENR--YPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 1 ~P~vv~~HGgg~--------~~g~~~~~~~~~~~--~~l~~~~g~~v~~-~d~r~~-~~~~--~~~~~~d~~~~~~~l~~ 66 (249)
.||+|.=|--|. -+|.+....|+.-. -.+|++.|..++. +|-.|. |+.. -..+.+.+..-+.-+.+
T Consensus 107 ~pv~vIG~qKG~dtk~~~~rNFGm~~PeGyRKAlRlm~~AekF~lPiitfIDT~GAypG~~AEErGQ~eAIA~nL~em~~ 186 (317)
T COG0825 107 QPVVVIGHQKGRDTKEKLKRNFGMPRPEGYRKALRLMKLAEKFGLPIITFIDTPGAYPGIGAEERGQSEAIARNLREMAR 186 (317)
T ss_pred eeEEEEeeecCccchhHHHhcCCCCCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcchhhcccHHHHHHHHHHHhC
Confidence 378888887664 34555555565443 3567788887665 465542 2211 12334444444444443
Q ss_pred hccCCCCCCCccCCCceEEEecchhHHHHHHHHHH
Q 041117 67 KISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVR 101 (249)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 101 (249)
.. ++.--++|.=.+.||.+|+..+-+
T Consensus 187 Lk---------vPiI~iVIGEGgSGGALAi~vad~ 212 (317)
T COG0825 187 LK---------VPIISIVIGEGGSGGALAIGVADR 212 (317)
T ss_pred CC---------CCEEEEEecCCCchhhHHhhHHHH
Confidence 32 333345555567788888888765
No 392
>PRK14438 acylphosphatase; Provisional
Probab=22.16 E-value=2.1e+02 Score=17.90 Aligned_cols=45 Identities=9% Similarity=0.169 Sum_probs=31.4
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCCC-CCCCCCchhhHHHHHHHHHh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLAP-ENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~~~~~d~~~~~~~l~~ 66 (249)
|+.+...+|.+.|..-.+-|..... +......-+++.+++++|.+
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (91)
T PRK14438 18 FRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCHH 63 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHhh
Confidence 7899999999999888877754321 22233445677788888864
No 393
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.90 E-value=73 Score=25.69 Aligned_cols=18 Identities=33% Similarity=0.067 Sum_probs=15.2
Q ss_pred eEEEecchhHHHHHHHHH
Q 041117 83 CFVAGDSAGGNLAHNVAV 100 (249)
Q Consensus 83 i~l~G~S~GG~~a~~~a~ 100 (249)
-+++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 478999999988888774
No 394
>TIGR03527 selenium_YedF selenium metabolism protein YedF. Members of this protein family are about 200 amino acids in size, and include the uncharacterized YedF protein of Escherichia coli. This family shares an N-terminal domain, modeled by pfam01206, with the sulfurtransferase TusA (also called SirA). The C-terminal domain includes a typical redox-active disulfide motif, CGXC. This protein family found only among those genomes that also carry the selenium donor protein SelD, and its connection to selenium metabolism is indicated by the method of partial phylogenetic profiling vs. SelD. Its gene typically is found next to selD. Members of this family are found even when selenocysteine and selenouridine biosynthesis pathways are, except for SelD, completely absent, as in Enterococcus faecalis. Its role in selenium metabolism is unclear, but may include either detoxification or a role in labile selenoprotein biosynthesis.
Probab=21.89 E-value=3.3e+02 Score=20.02 Aligned_cols=63 Identities=16% Similarity=0.264 Sum_probs=38.7
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEee----cCCCCCCCCCCCchhhHHHHHHHHHh
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISV----NYRLAPENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~----d~r~~~~~~~~~~~~d~~~~~~~l~~ 66 (249)
|.-||+-..|-.... ........++.|.++ |..+++. ||++-.+......+.++.+.++|+.+
T Consensus 121 p~~Ifl~n~gV~l~~-~~~~~~e~Lk~L~~~-Gv~I~~CGtCl~~~gl~~~~~vG~i~nm~~i~~~~~~ 187 (194)
T TIGR03527 121 PKRILFVNGGVKLTT-EGSEVLEDLKELEKK-GVEILSCGTCLDFYGLKDKLKVGTITNMYDIVEALTT 187 (194)
T ss_pred ceEEEEEccceeecc-CCchHHHHHHHHHHC-CCEEEEeHHHHHhcCCcccccCCccCCHHHHHHHHHh
Confidence 544555554433222 223356778888886 8888764 67775554445567777777777754
No 395
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=21.61 E-value=2e+02 Score=17.84 Aligned_cols=10 Identities=30% Similarity=0.272 Sum_probs=6.4
Q ss_pred CEEEEEecCc
Q 041117 2 PVIVYFHGGG 11 (249)
Q Consensus 2 P~vv~~HGgg 11 (249)
|+||++++|+
T Consensus 63 ~ivv~C~~G~ 72 (100)
T cd01523 63 EVTVICAKEG 72 (100)
T ss_pred eEEEEcCCCC
Confidence 5677777643
No 396
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=21.57 E-value=2.7e+02 Score=21.60 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=25.5
Q ss_pred ccchhHHHHHHHHhCCcEEEeecCCCCCCCCCCCchh
Q 041117 19 SKRYDDHCRRLAKEIPAVVISVNYRLAPENRYPSQYD 55 (249)
Q Consensus 19 ~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~ 55 (249)
.....+.++.++++.|+.|+.++.-|.+--.++....
T Consensus 165 C~~~apil~~fa~~ygi~v~~VS~DG~~~p~fp~~~~ 201 (256)
T TIGR02739 165 SQKMAPVIQAFAKEYGISVIPISVDGTLIPGLPNSRS 201 (256)
T ss_pred hHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCccC
Confidence 3346788899999999999888766554334444443
No 397
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.40 E-value=2.9e+02 Score=20.35 Aligned_cols=39 Identities=10% Similarity=0.099 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+.+.++.+.+.+.. .+..+|+++|-..-|.+|..++.++
T Consensus 25 ~~i~~a~~~l~~~l---------~~~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 25 DAISRAAMTLVQSL---------LNGNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred HHHHHHHHHHHHHH---------HcCCEEEEEECcHHHHHHHHHHHHH
Confidence 44555555555544 2568999999999999999999875
No 398
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=21.33 E-value=3.3e+02 Score=19.73 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=31.9
Q ss_pred CCcEEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeeecCCCC-h-hHHHHHHHHHHHh
Q 041117 180 IPATIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYIFPELH-E-GSFIDDVGNFIRD 244 (249)
Q Consensus 180 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~-~-~~~~~~~~~fl~~ 244 (249)
.|+++++||-.+.... -..+.+.+.+ ...++.++--||+....+... . +.+.+++.++++.
T Consensus 13 ~~~li~~hg~~~~~~~-~~~~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 13 APVLVFINSLGTDLRM-WDPVLPALTP---DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH 75 (251)
T ss_pred CCeEEEEcCcccchhh-HHHHHHHhhc---ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3557888887654321 1334445542 456666666666543222211 1 5566666666653
No 399
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=21.32 E-value=2.4e+02 Score=21.75 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchhHHHHHHHHHHh
Q 041117 55 DDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAGGNLAHNVAVRA 102 (249)
Q Consensus 55 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 102 (249)
+.+.++++.+.+... +..+++++|.-.-|.++..-|...
T Consensus 33 ~~I~~av~~~~~~l~---------~ggrl~~~GaGtSg~la~~da~e~ 71 (257)
T cd05007 33 PQIARAVDAAAERLR---------AGGRLIYVGAGTSGRLGVLDASEL 71 (257)
T ss_pred HHHHHHHHHHHHHHH---------cCCEEEEEcCcHHHHHHHHHHHhc
Confidence 455566666666553 567999999999999997777654
No 400
>PRK14527 adenylate kinase; Provisional
Probab=21.10 E-value=91 Score=22.54 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=21.9
Q ss_pred CEEEEEecCccccCCCCccchhHHHHHHHHhCCcEEEee
Q 041117 2 PVIVYFHGGGFVLLAANSKRYDDHCRRLAKEIPAVVISV 40 (249)
Q Consensus 2 P~vv~~HGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~ 40 (249)
|.+++++|.. |+.. ..+++.|+++.|+..+..
T Consensus 6 ~~~i~i~G~p---GsGK----sT~a~~La~~~~~~~is~ 37 (191)
T PRK14527 6 NKVVIFLGPP---GAGK----GTQAERLAQELGLKKLST 37 (191)
T ss_pred CcEEEEECCC---CCCH----HHHHHHHHHHhCCCCCCc
Confidence 6789999843 4433 356788888878766655
No 401
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=21.06 E-value=4e+02 Score=21.09 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=39.7
Q ss_pred EEEEecCCCcchhhHHHHHHHHHHCCCceEEEEeCCCceeeee---cCCCCh-hHHHHHHHHHHHhh
Q 041117 183 TIVIVGGFDPLKDWQKRHYQGLKRHGKEAYLIEYPNAVHGFYI---FPELHE-GSFIDDVGNFIRDQ 245 (249)
Q Consensus 183 ~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~-~~~~~~~~~fl~~~ 245 (249)
++++||-.|...- -..+++.+...| ..++.++--||+... ...... ..+.+++..|++..
T Consensus 37 Vvl~HG~~Eh~~r-y~~la~~l~~~G--~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~ 100 (298)
T COG2267 37 VVLVHGLGEHSGR-YEELADDLAARG--FDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETI 100 (298)
T ss_pred EEEecCchHHHHH-HHHHHHHHHhCC--CEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHH
Confidence 8999999987553 234667777666 466667767777553 222233 77888888887754
No 402
>PRK14420 acylphosphatase; Provisional
Probab=20.86 E-value=2e+02 Score=17.94 Aligned_cols=46 Identities=11% Similarity=-0.117 Sum_probs=31.5
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHhh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~ 67 (249)
|+.++.++|.+.|..-.+-|.... =+......-+++.+++++|.+.
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~ 63 (91)
T PRK14420 17 FRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKG 63 (91)
T ss_pred ChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhC
Confidence 788999999999988877765421 1122333446777888888765
No 403
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=20.71 E-value=1.7e+02 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.159 Sum_probs=19.3
Q ss_pred hHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 56 DGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 56 d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
++...+..+.+... +....++++|.|.
T Consensus 2 ~~~~~~~El~~~a~--------l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASN--------LKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhC--------CCCCCEEEEecch
Confidence 44556666666553 6778999999985
No 404
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=20.61 E-value=3.3e+02 Score=19.52 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=34.7
Q ss_pred HHHhCCcEEEeecCCCCCC-CCCCCchhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecchh
Q 041117 29 LAKEIPAVVISVNYRLAPE-NRYPSQYDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSAG 91 (249)
Q Consensus 29 l~~~~g~~v~~~d~r~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~G 91 (249)
|-+ .|+..+.+|.-.+=- ........++.+.++.+++.. ..+++.|+-.|+|
T Consensus 36 Lk~-~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~----------~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKK-KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQF----------GKDRVLIVSNSAG 88 (168)
T ss_pred hhh-cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHC----------CCCeEEEEECCCC
Confidence 444 599999988654321 122344567777777777664 3458999999986
No 405
>PRK14427 acylphosphatase; Provisional
Probab=20.56 E-value=2e+02 Score=18.21 Aligned_cols=46 Identities=11% Similarity=0.030 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHhh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~ 67 (249)
|+.+..++|.++|..-.+-|.... =+......-+++.+++++|.+.
T Consensus 21 FR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~~ 67 (94)
T PRK14427 21 FRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNSD 67 (94)
T ss_pred ChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhhC
Confidence 789999999999988877765422 1122334456777888888764
No 406
>PRK14422 acylphosphatase; Provisional
Probab=20.54 E-value=2.4e+02 Score=17.81 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=31.5
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHhh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDTK 67 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~ 67 (249)
|+.+..++|.++|..-.+-|.... =+-.....-+++.+++++|.+.
T Consensus 21 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g 67 (93)
T PRK14422 21 FRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRGD 67 (93)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhC
Confidence 789999999999988777665421 1122344456677788888764
No 407
>PRK14447 acylphosphatase; Provisional
Probab=20.43 E-value=1.7e+02 Score=18.49 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=31.6
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC--CCCCCCCchhhHHHHHHHHHh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA--PENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~~~~~~d~~~~~~~l~~ 66 (249)
|+.+..++|.++|..-.+-|.... =+......-+.+.+++++|.+
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~~ 65 (95)
T PRK14447 19 FRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWARV 65 (95)
T ss_pred chHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhh
Confidence 789999999999988877775422 122234556777788888864
No 408
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=20.37 E-value=1.2e+02 Score=23.87 Aligned_cols=8 Identities=75% Similarity=1.340 Sum_probs=6.2
Q ss_pred EEEEecCc
Q 041117 4 IVYFHGGG 11 (249)
Q Consensus 4 vv~~HGgg 11 (249)
+|++||||
T Consensus 58 ~VlVHGgg 65 (284)
T CHL00202 58 IVVVHGGG 65 (284)
T ss_pred EEEEeCCc
Confidence 67888876
No 409
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=20.25 E-value=6.8e+02 Score=23.01 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=24.4
Q ss_pred CCEEEEEecCcc--------ccCCCCccchhHH--HHHHHHhCCcEEEe-ecCCC
Q 041117 1 LPVIVYFHGGGF--------VLLAANSKRYDDH--CRRLAKEIPAVVIS-VNYRL 44 (249)
Q Consensus 1 ~P~vv~~HGgg~--------~~g~~~~~~~~~~--~~~l~~~~g~~v~~-~d~r~ 44 (249)
+||+|+-|-.|- ..|+.....|+.. +-.+|.+.|..++. +|-.|
T Consensus 199 rpV~VIAndkg~~tke~~~rnfG~~~peGyRKAlRlmkLAekfgLPIVtLVDTpG 253 (762)
T PLN03229 199 KRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPG 253 (762)
T ss_pred EEEEEEEecCCccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 367777776431 2243333334433 34678888887665 46544
No 410
>PRK13690 hypothetical protein; Provisional
Probab=20.19 E-value=1.8e+02 Score=20.98 Aligned_cols=29 Identities=17% Similarity=0.153 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCccCCCceEEEecch
Q 041117 54 YDDGIDVLKFIDTKISTVEDFPACADLKRCFVAGDSA 90 (249)
Q Consensus 54 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~i~l~G~S~ 90 (249)
.++....+.-+.+... +....++++|.|.
T Consensus 7 ~~~~~~~~~El~~~a~--------l~~g~i~VvGcST 35 (184)
T PRK13690 7 KKQTRQILEELLEQAN--------LKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHhhC--------CCCCCEEEEecch
Confidence 3556666666666654 6788999999995
No 411
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=20.03 E-value=48 Score=23.08 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=10.6
Q ss_pred eEEEecchhHHH
Q 041117 83 CFVAGDSAGGNL 94 (249)
Q Consensus 83 i~l~G~S~GG~~ 94 (249)
..++|.|+|+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999966
No 412
>PRK14437 acylphosphatase; Provisional
Probab=20.02 E-value=2.7e+02 Score=18.26 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=30.5
Q ss_pred hhHHHHHHHHhCCcEEEeecCCCC-CCCCCCCchhhHHHHHHHHHh
Q 041117 22 YDDHCRRLAKEIPAVVISVNYRLA-PENRYPSQYDDGIDVLKFIDT 66 (249)
Q Consensus 22 ~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~ 66 (249)
|+++..++|.++|..-.+-|.... =+......-+.+..++++|.+
T Consensus 38 FR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~~ 83 (109)
T PRK14437 38 FRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWE 83 (109)
T ss_pred chHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHh
Confidence 789999999999988888775432 111223344567777888864
Done!