BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041120
         (340 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255568345|ref|XP_002525147.1| cysteine protease, putative [Ricinus communis]
 gi|223535606|gb|EEF37274.1| cysteine protease, putative [Ricinus communis]
          Length = 347

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/342 (59%), Positives = 247/342 (72%), Gaps = 28/342 (8%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSE--GYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M++NA L L  L  L IP+ A SE    P    P +M+ R++ WL+QY R+Y ++DE+  
Sbjct: 6   MIKNAGLMLITLCTLWIPSIARSEIHSLPIDSAPTAMKVRYDKWLEQYGRKYDTKDEYLL 65

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-- 139
           RFGIY SN+Q+I+YINSQNLSFKLTDNKFADL+N+EF S YLGY     + R  S  +  
Sbjct: 66  RFGIYHSNIQFIEYINSQNLSFKLTDNKFADLTNDEFNSIYLGYQIRSYKRRNLSHMHEN 125

Query: 140 -LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              LP +VDWR+ GAVTP+KDQGQCGSCWAFSAVAAVEGINK+KTG LVSLSEQELVDCD
Sbjct: 126 STDLPDAVDWRENGAVTPIKDQGQCGSCWAFSAVAAVEGINKIKTGNLVSLSEQELVDCD 185

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
           VN +N+GCNGG+MEKAF FI  IGG+TTE+DYPY+G +  C+  KT +HAV I GYE +P
Sbjct: 186 VNGDNKGCNGGFMEKAFTFIKSIGGLTTENDYPYKGTDGSCEKAKTDNHAVIIGGYETVP 245

Query: 259 AR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKY 296
           A                       Y FQLYS GVF  YCG QLNHGVT+VGYG+++G+KY
Sbjct: 246 ANNENSLKVAVSKQPVSVAIDASGYEFQLYSEGVFSGYCGIQLNHGVTIVGYGDNNGQKY 305

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           WLVKNSWG  WGE+GYIRM R+S S   G+CGI M+ SYP+K
Sbjct: 306 WLVKNSWGKGWGESGYIRMKRDS-SDTKGMCGIAMEPSYPIK 346


>gi|225446523|ref|XP_002275891.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2 [Vitis vinifera]
          Length = 358

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/343 (54%), Positives = 238/343 (69%), Gaps = 28/343 (8%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGY-PQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M  RN   +L ++W +G+   A+SE + P + +   ME+R+E WL Q+ R Y + DEWQR
Sbjct: 5   MFCRNVYFALLIMWTVGVSWSAFSEEHEPMESEMSDMEKRYERWLVQHGRRYKNRDEWQR 64

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP----YNEPRWPSV 137
            FGIY SNV++I+YIN+QN SF LTDN+FAD++NEE+ + Y+G         N+  +   
Sbjct: 65  HFGIYQSNVRFINYINAQNFSFTLTDNQFADMTNEEYKALYMGLGTSETSRKNQSSFKRE 124

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
           +   LP SVDWRK GAVTPV++QG+CGSCWAFS VAAVEGINK++TGKLVSLSEQEL+DC
Sbjct: 125 RSKVLPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDC 184

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
           D++S N+GCNGGYM  AF+FI + GG+TT  +YPY G+   C  DK  +H V I+GYE +
Sbjct: 185 DIDSGNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETV 244

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
           P                        Y FQLYS G+F+ +CG QLNH VTV+GYGED+G+K
Sbjct: 245 PPNNEKILQAAVAKQPVSVAIDAGGYEFQLYSKGIFNGFCGKQLNHAVTVIGYGEDNGKK 304

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YWLVKNSWGT WGEAGY RM R+S     GICGI M+ASYP+K
Sbjct: 305 YWLVKNSWGTGWGEAGYARMIRDSRDDE-GICGIAMEASYPIK 346


>gi|302143380|emb|CBI21941.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/343 (54%), Positives = 238/343 (69%), Gaps = 28/343 (8%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGY-PQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M  RN   +L ++W +G+   A+SE + P + +   ME+R+E WL Q+ R Y + DEWQR
Sbjct: 1   MFCRNVYFALLIMWTVGVSWSAFSEEHEPMESEMSDMEKRYERWLVQHGRRYKNRDEWQR 60

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP----YNEPRWPSV 137
            FGIY SNV++I+YIN+QN SF LTDN+FAD++NEE+ + Y+G         N+  +   
Sbjct: 61  HFGIYQSNVRFINYINAQNFSFTLTDNQFADMTNEEYKALYMGLGTSETSRKNQSSFKRE 120

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
           +   LP SVDWRK GAVTPV++QG+CGSCWAFS VAAVEGINK++TGKLVSLSEQEL+DC
Sbjct: 121 RSKVLPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDC 180

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
           D++S N+GCNGGYM  AF+FI + GG+TT  +YPY G+   C  DK  +H V I+GYE +
Sbjct: 181 DIDSGNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETV 240

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
           P                        Y FQLYS G+F+ +CG QLNH VTV+GYGED+G+K
Sbjct: 241 PPNNEKILQAAVAKQPVSVAIDAGGYEFQLYSKGIFNGFCGKQLNHAVTVIGYGEDNGKK 300

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YWLVKNSWGT WGEAGY RM R+S     GICGI M+ASYP+K
Sbjct: 301 YWLVKNSWGTGWGEAGYARMIRDSRDDE-GICGIAMEASYPIK 342


>gi|297843430|ref|XP_002889596.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335438|gb|EFH65855.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/344 (52%), Positives = 227/344 (65%), Gaps = 27/344 (7%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDP-QSMEERFENWLKQYSREYGSEDEW 79
           M  +LRN+ L+L +L    + A          YDP +++++RFE WLK +S+ YG  DEW
Sbjct: 1   MLNVLRNSNLTLVVLICFVLIASKLCSVNSSVYDPHKTLKQRFEKWLKTHSKLYGGRDEW 60

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP---YNEPRWPS 136
             RFGIY SNVQ IDYINS +L FKLTDN+FAD++N EF + +LG N      ++ + P 
Sbjct: 61  MLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEFKAHFLGLNTSSLRLHKKQRPV 120

Query: 137 VQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               G +P +VDWR +GAVTP+++QG+CG CWAFSAVAA+EGINK+KTG LVSLSEQ+L+
Sbjct: 121 CDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAVAAIEGINKIKTGNLVSLSEQQLI 180

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCDV + N+GC+GG ME AFEFI   GG+TTE DYPY G    C  +K K+  VTI GY+
Sbjct: 181 DCDVGTYNKGCSGGLMETAFEFIKSNGGLTTETDYPYTGIEGTCDQEKAKNKVVTIQGYQ 240

Query: 256 AIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
            +                        + FQLYS GVF  YCG  LNHGVTVVGYG +  +
Sbjct: 241 KVAQNEASLQIAAAQQPVSVGIDAGGFIFQLYSSGVFTSYCGTNLNHGVTVVGYGVEGDQ 300

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KYW+VKNSWGT WGE GYIRM R   S + G CGI M ASYP++
Sbjct: 301 KYWIVKNSWGTGWGEEGYIRMER-GISEDTGKCGIAMLASYPLQ 343


>gi|358343350|ref|XP_003635767.1| Cysteine proteinase [Medicago truncatula]
 gi|355501702|gb|AES82905.1| Cysteine proteinase [Medicago truncatula]
          Length = 338

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/339 (52%), Positives = 232/339 (68%), Gaps = 26/339 (7%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQK-YDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M     LS+ +L  L I A A  E + +   +P  M++R+E WLK+Y R Y   +EW+ R
Sbjct: 1   MKTTITLSIVIL-NLWIIASACPEIHTKNSTNPAVMKKRYETWLKRYGRHYRDREEWEVR 59

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN-EPRWPSVQYLG 141
           F IY SNVQYI++ NSQN S+KL DN+FAD++NEEF STYLGY   +  +  +   ++  
Sbjct: 60  FDIYQSNVQYIEFYNSQNYSYKLIDNRFADITNEEFKSTYLGYLPRFRVQTEFRYHKHGE 119

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP S+DWRK+GAVT VKDQG+CGSCWAFSAVAAVEGINK+KT  LVSLSEQ+L+DCD+ S
Sbjct: 120 LPKSIDWRKKGAVTHVKDQGRCGSCWAFSAVAAVEGINKIKTENLVSLSEQQLIDCDIKS 179

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N+GC GG M  AF +I K GG+ T  +YPY+G++  C   K K++AVTI+GYE++PAR 
Sbjct: 180 GNEGCEGGDMYIAFNYIKKHGGIATAKEYPYKGRDGNCNKSKAKNNAVTISGYESVPARN 239

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                YAFQ YS G+F   CG  LNHG+T+VGYGE++G+KYW+V
Sbjct: 240 EKMLKAAVAHQPVSIATDAGGYAFQFYSKGIFSGSCGKNLNHGMTIVGYGEENGDKYWIV 299

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSW   WGE+GY+RM R++   + G CGI M A+YPVK
Sbjct: 300 KNSWANDWGESGYVRMKRDTKDKD-GTCGIAMDATYPVK 337


>gi|18390634|ref|NP_563764.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity to a cysteine endopeptidase 1 from Phaseolus
           vulgaris gb|U52970 and is a member of the papain
           cysteine protease family PF|00112 [Arabidopsis thaliana]
 gi|332189848|gb|AEE27969.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 343

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 179/344 (52%), Positives = 227/344 (65%), Gaps = 27/344 (7%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDP-QSMEERFENWLKQYSREYGSEDEW 79
           M  +LRN+ L+L +L    + A          YDP +++++RFE WLK +S+ YG  DEW
Sbjct: 1   MLNVLRNSNLTLAVLICFVLIASKLCSVDSSVYDPHKTLKQRFEKWLKTHSKLYGGRDEW 60

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP---YNEPRWPS 136
             RFGIY SNVQ IDYINS +L FKLTDN+FAD++N EF + +LG N      ++ + P 
Sbjct: 61  MLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEFKAHFLGLNTSSLRLHKKQRPV 120

Query: 137 VQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               G +P +VDWR +GAVTP+++QG+CG CWAFSAVAA+EGINK+KTG LVSLSEQ+L+
Sbjct: 121 CDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAVAAIEGINKIKTGNLVSLSEQQLI 180

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCDV + N+GC+GG ME AFEFI   GG+ TE DYPY G    C  +K+K+  VTI GY+
Sbjct: 181 DCDVGTYNKGCSGGLMETAFEFIKTNGGLATETDYPYTGIEGTCDQEKSKNKVVTIQGYQ 240

Query: 256 AIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
            +                        + FQLYS GVF  YCG  LNHGVTVVGYG +  +
Sbjct: 241 KVAQNEASLQIAAAQQPVSVGIDAGGFIFQLYSSGVFTNYCGTNLNHGVTVVGYGVEGDQ 300

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KYW+VKNSWGT WGE GYIRM R   S + G CGI M ASYP++
Sbjct: 301 KYWIVKNSWGTGWGEEGYIRMER-GVSEDTGKCGIAMMASYPLQ 343


>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula]
 gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula]
 gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula]
 gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  346 bits (887), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 228/342 (66%), Gaps = 30/342 (8%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYP----QKYDPQSMEERFENWLKQYSREYGSEDEW 79
           +L   +  L +L    + A + SE  P    +  D ++M++RF+ W+K++ R+Y   DE 
Sbjct: 5   ILTTTIFILLMLCNTCVIA-SESECPPTHKQKSSDVEAMKKRFDGWVKRHGRKYKHNDER 63

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPY--NEPRWPSV 137
           + RFGIY +NVQYI   N+Q  S+ LTDNKFADL+NEEF STY+G +     +   +   
Sbjct: 64  EVRFGIYQANVQYIQCKNAQKNSYNLTDNKFADLTNEEFQSTYMGLSTRLRSHNTGFRYD 123

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
           ++  LP S DWRKEGAVT + DQGQCG CWAF+AVAAVEGINK+K+GKL+SLSEQEL+DC
Sbjct: 124 EHGDLPESKDWRKEGAVTEIMDQGQCGGCWAFAAVAAVEGINKIKSGKLISLSEQELIDC 183

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
           DV S NQGC GG ME A+ FI + GG+TTE DYPY G +  C+ +K  H+A +I+GYE +
Sbjct: 184 DVKSGNQGCQGGLMETAYTFIIENGGLTTEQDYPYEGVDGTCKMEKAAHYAASISGYEEV 243

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
           PA                       Y+FQ YS GVF   CG QLNHGVTVVGYG++   K
Sbjct: 244 PADNEAKLKAAAAHQPVSVAIDAGGYSFQFYSEGVFSGICGKQLNHGVTVVGYGKETINK 303

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YW+VKNSWG  WGE+GYIRM R++ S   G+CGI MQASYP+
Sbjct: 304 YWIVKNSWGADWGESGYIRMKRDTLSKE-GMCGIAMQASYPL 344


>gi|449460678|ref|XP_004148072.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Cucumis
           sativus]
          Length = 317

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 172/306 (56%), Positives = 210/306 (68%), Gaps = 29/306 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           +++R++ W+ +Y R+Y S +EW+RRF IY +NVQYID  NS N S  L +N FADL+NEE
Sbjct: 15  IQDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAENNFADLTNEE 74

Query: 118 FISTYLGYNK---PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           F +TYLGY     P    R+ ++  + LP +VDWR+EGAVTP+K+QGQCGSCWAFSAVAA
Sbjct: 75  FKATYLGYKTVSIPDTCFRYGNM--VNLPTNVDWRQEGAVTPIKNQGQCGSCWAFSAVAA 132

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+K GKL+SLSEQELVDCDV S NQGCNGGYM KAFEFI +  G+TTE +YPY+G
Sbjct: 133 VEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFIKRT-GLTTEIEYPYQG 191

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
               C   K K+  V+I+GYE +P                          FQ YS G+F 
Sbjct: 192 AESACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNFQFYSGGIFS 251

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG+QLNHGV +VGYGE   + YWLVKNSWGT WGE+GYIRM R+S     G CGI M 
Sbjct: 252 GNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGESGYIRMKRDSTDRQ-GTCGIAMM 310

Query: 333 ASYPVK 338
           ASYP K
Sbjct: 311 ASYPTK 316


>gi|449524070|ref|XP_004169046.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like, partial
           [Cucumis sativus]
          Length = 314

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 171/304 (56%), Positives = 209/304 (68%), Gaps = 29/304 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           +++R++ W+ +Y R+Y S +EW+RRF IY +NVQYID  NS N S  L +N FADL+NEE
Sbjct: 15  IQDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAENNFADLTNEE 74

Query: 118 FISTYLGYNK---PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           F +TYLGY     P    R+ ++  + LP +VDWR+EGAVTP+K+QGQCGSCWAFSAVAA
Sbjct: 75  FKATYLGYKTVSIPDTCFRYGNM--VNLPTNVDWRQEGAVTPIKNQGQCGSCWAFSAVAA 132

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+K GKL+SLSEQELVDCDV S NQGCNGGYM KAFEFI +  G+TTE +YPY+G
Sbjct: 133 VEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFIKRT-GLTTEIEYPYQG 191

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
               C   K K+  V+I+GYE +P                          FQ YS G+F 
Sbjct: 192 AESACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNFQFYSGGIFS 251

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG+QLNHGV +VGYGE   + YWLVKNSWGT WGE+GYIRM R+S     G CGI M 
Sbjct: 252 GNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGESGYIRMKRDSTDKQ-GTCGIAMM 310

Query: 333 ASYP 336
           ASYP
Sbjct: 311 ASYP 314


>gi|356543010|ref|XP_003539956.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 306

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 204/310 (65%), Gaps = 34/310 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M  RFE WLKQ  R Y  ++EW+ RFGIY +N++YI+  NSQ  S+ LTDNKFADL+NEE
Sbjct: 1   MRVRFERWLKQNDRXYKDKEEWEVRFGIYQANLEYIECKNSQEXSYNLTDNKFADLTNEE 60

Query: 118 FISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           F+S YLG+   +     P   ++      LP S DWRKEGAV+ +KDQG CGSCWAFSAV
Sbjct: 61  FVSPYLGFGTRF----LPHTGFMYHEHEDLPESKDWRKEGAVSDIKDQGNCGSCWAFSAV 116

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEGINK+K+GKLVSLSEQE  DCDV   NQGC GG M+ AF FI K GG+TT  DYPY
Sbjct: 117 AAVEGINKIKSGKLVSLSEQEFRDCDVEDGNQGCEGGLMDTAFAFIKKNGGLTTSKDYPY 176

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR------------------------YAFQLYSH 268
            G +  C  +K  HHA  I+G+  +PA                         +AFQLY  
Sbjct: 177 EGVDGTCNKEKALHHAANISGHVKVPANDEAMLKAKAAAANQXESVAIDAGGHAFQLYLK 236

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           GVF   CG QLNHGVT+VGYG+   +KYW+VKNSWG  WGE+GYIRM R++     G CG
Sbjct: 237 GVFSGICGKQLNHGVTIVGYGKGTSDKYWIVKNSWGADWGESGYIRMKRDA-FDKAGTCG 295

Query: 329 ILMQASYPVK 338
           I MQASYP+K
Sbjct: 296 IAMQASYPLK 305


>gi|356542171|ref|XP_003539543.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP2-like [Glycine max]
          Length = 342

 Score =  330 bits (845), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 170/335 (50%), Positives = 219/335 (65%), Gaps = 26/335 (7%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGY-PQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIY 86
           A+++L +L  L I A A    +     D + M  R+E+WLK+Y ++Y ++DEW+ RF IY
Sbjct: 9   AIINLLVLCNLWITASACPAKHNDNSSDSEVMRMRYESWLKKYGQKYRNKDEWEFRFEIY 68

Query: 87  SSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-KPYNEPRWPSVQYLGLPAS 145
            +NVQ+I+  NSQN S+KL DNKF DL+NEEF   YL Y  + + + R+   ++  LP  
Sbjct: 69  RANVQFIEVYNSQNYSYKLMDNKFVDLTNEEFRRMYLVYQPRSHLQTRFMYQKHGDLPKR 128

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           +DWR  GAVT +KDQG CGSCW+FSAVA VE INK+KTGKLVSLSEQ+L+DCD  + N+G
Sbjct: 129 IDWRTRGAVTXIKDQGHCGSCWSFSAVATVEDINKIKTGKLVSLSEQQLIDCDNRNGNEG 188

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----- 260
           CNGG+ME  F FITK GG+TT+ +YPY+G +      K ++HAV I GYE +PA      
Sbjct: 189 CNGGHME-TFTFITKRGGLTTDKNYPYQGSDGDXNKAKVRNHAVAICGYENLPAHNENML 247

Query: 261 -----------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSW 303
                            YAFQLYS G F   CG  LNH +T+VGYGE++GEKYWLVKNSW
Sbjct: 248 KAAVAHQPASVATDAGGYAFQLYSKGTFSGSCGKDLNHRMTIVGYGEENGEKYWLVKNSW 307

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
               G +GYIRM R+ P    G CG  M+ASYP K
Sbjct: 308 ANDXGVSGYIRMKRD-PKDKDGTCGTAMEASYPDK 341


>gi|224081320|ref|XP_002306369.1| predicted protein [Populus trichocarpa]
 gi|222855818|gb|EEE93365.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 172/343 (50%), Positives = 215/343 (62%), Gaps = 32/343 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           MR+  ++  + L LL+VLG    AW S+   +     SM ER E W+ QY R Y  + E 
Sbjct: 1   MRLTKQSQFICLALLFVLG----AWPSKSAARTLQDVSMYERHEQWMAQYGRVYKDDAEK 56

Query: 80  QRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
           + R+ I+  NV  ID  NSQ   S+KL  N+FADLSNEEF ++   +      P+    +
Sbjct: 57  ETRYNIFKENVARIDAFNSQTGKSYKLGVNQFADLSNEEFKASRNRFKGHMCSPQAGPFR 116

Query: 139 Y---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
           Y     +PA++DWRK+GAVTPVKDQGQCG CWAFSAVAA+EGIN+L TGKL+SLSEQE+V
Sbjct: 117 YENVSAVPATMDWRKKGAVTPVKDQGQCGCCWAFSAVAAMEGINQLTTGKLISLSEQEVV 176

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCD   E+QGCNGG M+ AF+FI +  G+TTE +YPY G +  C T K   HA  ITG+E
Sbjct: 177 DCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYTGTDGTCNTQKEATHAAKITGFE 236

Query: 256 AIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHG 293
            +PA                       + FQ YS G+F   CG QL+HGVT VGYG   G
Sbjct: 237 DVPANSEAALMKAVAKQPVSVAIDAGGFEFQFYSSGIFTGSCGTQLDHGVTAVGYGISDG 296

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            KYWLVKNSWG  WGE GYIRM ++  S+  G+CGI MQASYP
Sbjct: 297 TKYWLVKNSWGAQWGEEGYIRMQKD-ISAKEGLCGIAMQASYP 338


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  320 bits (819), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 167/333 (50%), Positives = 213/333 (63%), Gaps = 30/333 (9%)

Query: 34  LLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           L++V  +  G W S+ + +     +M ER E W+ +Y R Y    E +RRF I+ +NV++
Sbjct: 9   LMFVALLVVGLWVSQAWSRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 93  IDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNE--PRWPSVQY---LGLPASV 146
           I+  N   N  +KL  N+FADL+NEEF ++  GY +  N       S +Y     +P S+
Sbjct: 69  IESFNKPGNRPYKLDINEFADLTNEEFKASRNGYKRSSNVGLSEKSSFRYGNVTAVPTSM 128

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR++GAVTP+KDQGQCG CWAFSAVAA+EGI KL TGKL+SLSEQELVDCD + E+QGC
Sbjct: 129 DWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGC 188

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------ 260
            GG M+ AFEFI + GG+TTE +YPY+G +  C T+K  + A  ITGYE +PA       
Sbjct: 189 EGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPANSEDALL 248

Query: 261 ----------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWG 304
                            AFQ YS GVF   CG +L+HGVT VGYG   G KYWLVKNSWG
Sbjct: 249 KAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDGTKYWLVKNSWG 308

Query: 305 TSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           TSWGE GYIRM R+  +   G+CGI MQ+SYP 
Sbjct: 309 TSWGEDGYIRMERDIEAKE-GLCGIAMQSSYPT 340


>gi|224093956|ref|XP_002310053.1| predicted protein [Populus trichocarpa]
 gi|224147016|ref|XP_002336386.1| predicted protein [Populus trichocarpa]
 gi|222834869|gb|EEE73318.1| predicted protein [Populus trichocarpa]
 gi|222852956|gb|EEE90503.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 170/344 (49%), Positives = 212/344 (61%), Gaps = 32/344 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           MR   +   + L LL++LG    AW S+   +      M ER E W+ QY R Y  ++E 
Sbjct: 1   MRFTKQFQFVCLALLFILG----AWPSKSTARTLLDAPMYERHEQWMTQYGRVYKDDNER 56

Query: 80  QRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
             R+ I+  NV  ID  NSQ   S+KL  N+FADL+NEEF ++   +      P+    +
Sbjct: 57  ATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFKASRNRFKGHMCSPQAGPFR 116

Query: 139 Y---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
           Y     +P++VDWRKEGAVTPVKDQGQCG CWAFSAVAA+EGINKL TGKL+SLSEQE+V
Sbjct: 117 YENVSAVPSTVDWRKEGAVTPVKDQGQCGCCWAFSAVAAMEGINKLTTGKLISLSEQEVV 176

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCD   E+QGCNGG M+ AF+FI +  G+TTE +YPY+G +  C T+K   HA  ITG+E
Sbjct: 177 DCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGTCNTNKAAIHAAKITGFE 236

Query: 256 AIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHG 293
            +PA                         FQ YS G+F   C  QL+HGVT VGYG   G
Sbjct: 237 DVPANSEAALMKAVAKQPVSVAIDAGGSDFQFYSSGIFTGSCDTQLDHGVTAVGYGVSDG 296

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            KYWLVKNSWG  WGE GYIRM ++  S+  G+CGI MQASYP 
Sbjct: 297 SKYWLVKNSWGAQWGEEGYIRMQKD-ISAKEGLCGIAMQASYPT 339


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 161/308 (52%), Positives = 199/308 (64%), Gaps = 29/308 (9%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +SM ER E W+ Q+ R Y +  E   RF I+ +NV+ I+  N++N  FKL  N+FADL+N
Sbjct: 35  KSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRANVERIESFNAENHKFKLGVNQFADLTN 94

Query: 116 EEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           EEF +      KP       S +Y     +PA++DWR +GAVTP+KDQGQCGSCWAFSAV
Sbjct: 95  EEFKTR--NTLKPSKMASTKSFKYENVTAVPATMDWRTKGAVTPIKDQGQCGSCWAFSAV 152

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AA EGI KL TGKL+SLSEQE+VDCDV S++QGCNGG M+ AFE+I K  G+TTE +YPY
Sbjct: 153 AATEGITKLSTGKLISLSEQEVVDCDVTSDDQGCNGGEMDDAFEYIIKNKGITTEANYPY 212

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           +  +  C T K   HA +ITGYE +                         +AFQ+YS GV
Sbjct: 213 KAADGTCNTKKAASHAASITGYEDVTVNSEAALLKAAANQPIAVAIDAGDFAFQMYSSGV 272

Query: 271 FDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F   CG  L+HGVT+VGYG    G KYWLVKNSWGTSWGE GYIRM R+  +   G+CGI
Sbjct: 273 FTGDCGTDLDHGVTLVGYGATSDGTKYWLVKNSWGTSWGEDGYIRMERDVDAKE-GLCGI 331

Query: 330 LMQASYPV 337
            M ASYP 
Sbjct: 332 AMDASYPT 339


>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis]
 gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 165/334 (49%), Positives = 209/334 (62%), Gaps = 31/334 (9%)

Query: 34  LLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           L++V  +  G W S+ + +     +M ER E W+ +Y R Y    E +RRF I+ +NV++
Sbjct: 9   LMFVALLVVGLWASQAWSRSLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 93  IDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKP-----YNEPRWPSVQYLGLPASV 146
           I+  N   N  +KL  N+FADL+NEEF  +  GY +        +  +       +P S+
Sbjct: 69  IESFNKLGNRPYKLDINEFADLTNEEFKVSKNGYKRSSGVGLTEKSSFRYANVTAVPTSM 128

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR+ GAVTP+KDQGQCG CWAFSAVAA+EGI KL TGKL+SLSEQELVDCD + E+QGC
Sbjct: 129 DWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGC 188

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------ 260
            GG M+ AFEFI + GG+TTE +YPY+G +  C T+K  + A  ITGYE +PA       
Sbjct: 189 EGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPANSEDALL 248

Query: 261 ----------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSW 303
                            AFQ YS GVF   CG +L+HGVT VGYG  D G KYWLVKNSW
Sbjct: 249 KAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDDGTKYWLVKNSW 308

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GTSWGE GYIRM R+  +   G+CGI MQ SYP 
Sbjct: 309 GTSWGEDGYIRMERDIEAKE-GLCGIAMQPSYPT 341


>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1 [Vitis vinifera]
          Length = 341

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 209/336 (62%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY R Y   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARNLHEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           ++DWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TIDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GCNGG M+ AF+FI +  G+TTE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCNGGLMDDAFKFIKQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                             + FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 246 LQKAVVHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 306 SWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 340


>gi|224162986|ref|XP_002338508.1| predicted protein [Populus trichocarpa]
 gi|222872535|gb|EEF09666.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/306 (52%), Positives = 196/306 (64%), Gaps = 27/306 (8%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNE 116
           M ER E W+ QY R Y  ++E   R+ I+  NV  ID  NSQ   S+KL  N+FADL+NE
Sbjct: 1   MYERHEQWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNE 60

Query: 117 EFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EF ++   +      P+    +Y     +P++VDWRKEGAVTPVKDQGQCG CWAFSAVA
Sbjct: 61  EFKASRNRFKGHMCSPQAGPFRYENVSAVPSTVDWRKEGAVTPVKDQGQCGCCWAFSAVA 120

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EGINKL TGKL+SLSEQE+VDCD   E+QGCNGG M+ AF+FI +  G+TTE +YPY+
Sbjct: 121 AMEGINKLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYK 180

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVF 271
           G +  C T K+  HA  ITG+E +PA                         FQ YS G+F
Sbjct: 181 GTDGTCNTKKSAIHAAKITGFEDVPANSEAALMKAVAKQPVSVAIDAGGSDFQFYSSGIF 240

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              C  QL+HGVT VGYG   G KYWLVKNSWG  WGE GYIRM ++  S+  G+CGI M
Sbjct: 241 TGSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEEGYIRMQKD-ISAKEGLCGIAM 299

Query: 332 QASYPV 337
           QASYP 
Sbjct: 300 QASYPT 305


>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera]
          Length = 341

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 166/336 (49%), Positives = 210/336 (62%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY REY   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARNLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC+GG M+ AF+FI +  G+TTE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ YS GVF   CG +L+HGV+ VGYG  D G KYWLVKN
Sbjct: 246 LQKAVAHQPIAVAIDAGGSEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 306 SWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 340


>gi|255568297|ref|XP_002525123.1| cysteine protease, putative [Ricinus communis]
 gi|223535582|gb|EEF37250.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  311 bits (796), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 159/345 (46%), Positives = 211/345 (61%), Gaps = 32/345 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M  + +  +L + L +VL + A    +   ++     M  R E W+ ++ + Y  + E  
Sbjct: 1   MAFLCKGKILPIALFFVLAMCA---DQAASRELHELEMTGRHEKWMAKHGKVYKDDKEKL 57

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR----WP 135
           RRF I+ SNV +I+  N+  N S+ L  NKFADL+NEEF + + GY +P    R    + 
Sbjct: 58  RRFQIFKSNVVFIESFNTAGNKSYMLGINKFADLTNEEFRAFWNGYKRPLGASRKITPFK 117

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
                 LP+S+DWR +GAVTP+KDQG CGSCWAFSAVAA EGI+KL+TGKLVSLSEQELV
Sbjct: 118 YENVTALPSSIDWRSKGAVTPIKDQGVCGSCWAFSAVAATEGIHKLRTGKLVSLSEQELV 177

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCDV  +++GC GG M  AF+FI + GG+T+E +YPY+G++ +C T K    AV ITGY+
Sbjct: 178 DCDVKGQDKGCQGGLMVDAFKFIKRHGGMTSEANYPYQGRDGKCDTKKEASRAVKITGYQ 237

Query: 256 AIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DH 292
           A+P                         +FQ Y  G+F   CG  +NHGV  VGYG  + 
Sbjct: 238 AVPKNSEAALLKAVANQPVSVAIDAGSLSFQFYRSGIFTGICGKDINHGVAAVGYGRSNS 297

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G KYW+VKNSWGT WGE GYIRM R+  S   G+CGI M+ SYP 
Sbjct: 298 GSKYWIVKNSWGTEWGEKGYIRMKRDVRSKE-GLCGIAMECSYPT 341


>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 208/336 (61%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY REY   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARSLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC+GG M+ AF+FI +  G+TTE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 246 LQKAVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SW T WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 306 SWSTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 340


>gi|224135841|ref|XP_002327317.1| predicted protein [Populus trichocarpa]
 gi|222835687|gb|EEE74122.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  310 bits (793), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 167/347 (48%), Positives = 210/347 (60%), Gaps = 36/347 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWS-EGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           M  + R      F+L +LG+    W+ E   ++    SM  R E W++ + + Y    E 
Sbjct: 1   MVSICRRQCFFAFIL-ILGM----WAYEVASRELQEPSMSARHEQWMETFGKVYADAAEK 55

Query: 80  QRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPS 136
           +RRF I+  NV+YI+  N+  N  +KL+ NKFADL+NEE      GY +P      +  S
Sbjct: 56  ERRFEIFKDNVEYIESFNTAGNKPYKLSVNKFADLTNEELKVARNGYRRPLQTRPMKVTS 115

Query: 137 VQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
            +Y     +PA++DWRK+GAVTP+KDQGQCGSCWAFS VAA EGIN+L TGKLVSLSEQE
Sbjct: 116 FKYENVTAVPATMDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQE 175

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDCD   E+QGC GG ME  FEFI K  G+TTE +YPY+  +  C + K       ITG
Sbjct: 176 LVDCDTQGEDQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKEASRIAKITG 235

Query: 254 YEAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE- 290
           YE++PA                         FQ YS GVF   CG +L+HGVT VGYGE 
Sbjct: 236 YESVPANSEAALLKAVASQPISVSIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGET 295

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             G KYWLVKNSWGTSWGE GYIRM R++ +   G+CGI M +SYP 
Sbjct: 296 SDGTKYWLVKNSWGTSWGEEGYIRMQRDTEAEE-GLCGIAMDSSYPT 341


>gi|225446585|ref|XP_002280215.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 164/336 (48%), Positives = 207/336 (61%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+ L     AW S+   +     SM ER E+W+ QY R Y   DE  +R+ I+  
Sbjct: 10  ICLALLFFLA----AWASQATARNLLEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEHVAAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GCNGG M+ AF+FI +  G+ TE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCNGGLMDDAFKFIEQNHGLATEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                             + FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 246 LQKAVAHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 306 SWGTGWGEVGYIRMQRDVTAKE-GLCGIAMQASYPT 340


>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera]
          Length = 341

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 207/336 (61%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY REY   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARXLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC+GG M+ AF+FI +  G+TTE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 246 LQKAVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SW T WGE GYIRM R+      G+CGI MQASYP 
Sbjct: 306 SWSTGWGEEGYIRMQRDVTVKE-GLCGIAMQASYPT 340


>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera]
          Length = 341

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 207/336 (61%), Gaps = 33/336 (9%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S    +     SM ER E+W+ QY R Y    E  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASHAKARNLHEASMYERHEDWMAQYGRVYKDAGEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + N S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMNKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEHVXAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC+GG M+ AF+FI +  G+TTE +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                             + FQ YS GVF   CG +L+HGV+ VGYG  D G KYWLVKN
Sbjct: 246 LQKAVAHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+      G+CGI MQASYP 
Sbjct: 306 SWGTGWGEEGYIRMQRDVTEKE-GLCGIAMQASYPT 340


>gi|224121800|ref|XP_002330656.1| predicted protein [Populus trichocarpa]
 gi|222872260|gb|EEF09391.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 162/339 (47%), Positives = 204/339 (60%), Gaps = 38/339 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A + +  +W   + +    E Y        M  R E W+  Y + Y    E +RRF I+ 
Sbjct: 12  AFILILGMWAFEVASRELQESY--------MSARHEQWMATYGKVYVDAAEKERRFKIFK 63

Query: 88  SNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LG 141
           +NV+YI+  N+  N  +KL+ NKFAD +NE+F     GY +P+     +  S +Y     
Sbjct: 64  NNVEYIESFNTAGNKPYKLSVNKFADQTNEKFKGARNGYRRPFQTRPMKVTSFKYENVTA 123

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +PA++DWRK+GAVT +KDQGQCGSCWAFS VAA EGIN+L TGKLVSLSEQELVDCD+  
Sbjct: 124 VPATMDWRKKGAVTLIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDIQG 183

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY 261
           E+QGC GG ME  FEFI K  G+TTE +YPY+  +  C + K   H   ITGYE++PA  
Sbjct: 184 EDQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKQASHIAKITGYESVPANS 243

Query: 262 A----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWL 298
                                  FQ YS GVF   CG +L+HGVT VGYGE   G KYWL
Sbjct: 244 EAELLKVVANQPISVSIDAGGSDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWL 303

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VKNSWGTSWGE GYIRM R+  +   G+CGI M +SYP 
Sbjct: 304 VKNSWGTSWGEEGYIRMQRDIDTEE-GLCGIAMDSSYPT 341


>gi|50355613|dbj|BAD29955.1| cysteine protease [Daucus carota]
          Length = 365

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 162/346 (46%), Positives = 215/346 (62%), Gaps = 35/346 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M + +++    L LL+ +G+ A   S    +  +  SM E  + W+ +Y R Y + +E  
Sbjct: 1   MALTIKHQCTPLALLFTIGVLA---SLAAARSLNEASMTETHDQWMARYGRVYKTANEKN 57

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPY-----NEPRW 134
           RR  I+  N++YI   N + N  +KL  N+FADL+NEEF ++   +         N  R+
Sbjct: 58  RRSTIFQENLKYIQTFNKANNKPYKLGVNEFADLTNEEFTTSRNKFKSHVCATVTNVFRY 117

Query: 135 PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    +PA++DWRK+GAVTP+K+QGQCG CWAFSAVAA+EGI +LKTGKL+SLSEQEL
Sbjct: 118 ENV--TAVPATMDWRKKGAVTPIKNQGQCGCCWAFSAVAAMEGITQLKTGKLISLSEQEL 175

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD N E+QGC GG M+ AF+FI +  G++TE +YPY G +  C  +K  +HA TITG+
Sbjct: 176 VDCDTNGEDQGCEGGLMDYAFDFIQQNHGLSTETNYPYSGTDGTCNANKEANHAATITGH 235

Query: 255 EAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-ED 291
           E +PA                         FQ YS GVF   CG +L+HGVT VGYG   
Sbjct: 236 EDVPANSESALLKAVANQPISVAIDASGSDFQFYSSGVFTGECGTELDHGVTAVGYGTAA 295

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            G KYWLVKNSWGTSWGE GYI+M R   ++  G+CGI MQASYP 
Sbjct: 296 DGTKYWLVKNSWGTSWGEEGYIQMQRGVAAAE-GLCGIAMQASYPT 340


>gi|255580657|ref|XP_002531151.1| cysteine protease, putative [Ricinus communis]
 gi|223529264|gb|EEF31236.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 208/343 (60%), Gaps = 30/343 (8%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M    RN  +SL L+++LG      S+   +     SM E+ E W+ ++ R Y   +E +
Sbjct: 1   MAFTTRNGCISLALIFLLGALV---SQAMARTLQDASMHEKHEEWMSRFGRVYNDGNEKE 57

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY 139
            R+ I+  NVQ I+  N +   S+KL  N+FADL+NEEF ++   +       +    +Y
Sbjct: 58  IRYKIFKENVQRIESFNKASGKSYKLGINQFADLTNEEFKTSRNRFKGHMCSSQAGPFRY 117

Query: 140 LGL---PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
             L   P+S+DWRK+GAVT +KDQGQCGSCWAFSAVAAVEGI +L T KL+SLSEQELVD
Sbjct: 118 ENLTAAPSSMDWRKKGAVTAIKDQGQCGSCWAFSAVAAVEGITQLATSKLISLSEQELVD 177

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD   E+QGC GG M+ AF+FI +  G+TTE +YPY G +  C T +  +HA  I G+E 
Sbjct: 178 CDTKGEDQGCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDGTCNTKQEANHAAKINGFED 237

Query: 257 IPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +PA                       + FQ YS G+F   CG +L+HGV  VGYGE +G 
Sbjct: 238 VPANNEGALMKAVAKQPVSVAIDAGGFGFQFYSSGIFTGDCGTELDHGVAAVGYGESNGM 297

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YWLVKNSWGT WGE GYIRM ++  +   G+CGI MQASYP 
Sbjct: 298 NYWLVKNSWGTQWGEEGYIRMQKDIDAKE-GLCGIAMQASYPT 339


>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis]
 gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis]
          Length = 344

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/348 (47%), Positives = 212/348 (60%), Gaps = 36/348 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M ++L N ++ + +L V    + +WS    +     SME R + W+ QY R Y    E +
Sbjct: 1   MALLLHNKLVLMAMLLVTLWASQSWSRSLHEA----SMELRHKTWMTQYGRVYKGNVEKE 56

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP----RWP 135
           +RF I+  NV++I+  N+  N  +KL  N F DL+NEEF +++ GY    +      R  
Sbjct: 57  KRFKIFKENVEFIESFNNNGNKPYKLGINAFTDLTNEEFRASHNGYTMSMSSHQSSYRTK 116

Query: 136 SVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           S +Y     +P S+DWR +GAVT +KDQGQCG CWAFSAVAA+EGI KL TG L+SLSEQ
Sbjct: 117 SFRYENVTAVPPSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGTLISLSEQ 176

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCD +  +QGC GG M+ AFEFI +  G+TTE +YPY G +  C T K  +HA  IT
Sbjct: 177 ELVDCDTSGMDQGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDGSCNTRKAANHAAKIT 236

Query: 253 GYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYG- 289
           GYE +PA                        AFQ YS G+F   CG +L+HGVTVVGYG 
Sbjct: 237 GYENVPAYDEEALRKAVANQPVSVAIDAGESAFQHYSSGIFTGDCGTELDHGVTVVGYGT 296

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            D G KYWLVKNSWGTSWGE GYIRM R+  +   G+CGI M+ SYP 
Sbjct: 297 SDDGTKYWLVKNSWGTSWGEDGYIRMERDIDAKE-GLCGIAMEPSYPT 343


>gi|255580659|ref|XP_002531152.1| cysteine protease, putative [Ricinus communis]
 gi|223529265|gb|EEF31237.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/343 (45%), Positives = 208/343 (60%), Gaps = 30/343 (8%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   +R+  +SL L++ LG  A   S+   +     S+ E+ E W+ ++ R Y    E +
Sbjct: 1   MAFTIRHGCISLALIFFLGALA---SQAIARTLQDASIHEKHEEWMTRFKRVYSDAKEKE 57

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY 139
            R+ I+  NVQ I+  N +   S+KL  N+FADL+NEEF ++   +       +    +Y
Sbjct: 58  IRYKIFKENVQRIESFNKASEKSYKLGINQFADLTNEEFKTSRNRFKGHMCSSQAGPFRY 117

Query: 140 ---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                +P+S+DWRKEGAVT +KDQGQCGSCWAFSAVAAVEGI +L T KL+SLSEQELVD
Sbjct: 118 ENITAVPSSMDWRKEGAVTAIKDQGQCGSCWAFSAVAAVEGITQLATSKLISLSEQELVD 177

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD   E+QGC GG M+ AF+FI +  G+TTE +YPY G +  C T +  +HA  I G+E 
Sbjct: 178 CDTKGEDQGCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDGTCNTKQEANHAAKINGFED 237

Query: 257 IPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +PA                       + FQ YS G+F   CG +L+HGV  VGYGE +G 
Sbjct: 238 VPANNEGALMKAVAKQPVSVAIDAGGFEFQFYSSGIFTGDCGTELDHGVAAVGYGESNGM 297

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YWLVKNSWGT WGE GYIRM ++  +   G+CGI MQASYP 
Sbjct: 298 NYWLVKNSWGTQWGEEGYIRMQKDIDAKE-GLCGIAMQASYPT 339


>gi|224099295|ref|XP_002334495.1| predicted protein [Populus trichocarpa]
 gi|222872550|gb|EEF09681.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 162/339 (47%), Positives = 203/339 (59%), Gaps = 38/339 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A + +  +W   + +    E Y        M  R E W+  Y + Y    E +RRF I+ 
Sbjct: 12  AFILILGMWAFEVASRELQESY--------MSARHEQWMATYGKVYVDAAEKERRFKIFK 63

Query: 88  SNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LG 141
           +NV+YI+  N+  N  +KL+ NKFAD +NE+F     GY +P+     +  S +Y     
Sbjct: 64  NNVEYIESFNTAGNKPYKLSVNKFADQTNEKFKGARNGYRRPFQTRPMKVTSFKYENVTA 123

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +PA++DWRK+GAVTP+KDQGQCGSCWAFS VAA EGIN+L TGKLVSLSEQELVDCD   
Sbjct: 124 VPATMDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDNQG 183

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY 261
           E+QGC GG ME  FEFI K  G+TTE +YPY+  +  C + K   H   ITGYE++PA  
Sbjct: 184 EDQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKQASHIAKITGYESVPANS 243

Query: 262 A----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWL 298
                                  FQ YS GVF   CG +L+HGVT VGYGE   G KYWL
Sbjct: 244 EAELLKVVANQPISVSIDAGGSDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWL 303

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VKNSW TSWGE GYIRM R+  +   G+CGI M +SYP 
Sbjct: 304 VKNSWXTSWGEEGYIRMQRDIDAEE-GLCGIAMDSSYPT 341


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  304 bits (779), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 168/366 (45%), Positives = 216/366 (59%), Gaps = 48/366 (13%)

Query: 5   LFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFEN 64
           LF ++ + L L  A DM ++  +    L                 P       +   +E+
Sbjct: 18  LFFSLASFLMLSSASDMSIITYDETHGL---------------NSPPLRTHDQLLSLYES 62

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYL 123
           WL ++ + Y +  E + RFGI+  NV ++D  NS +N S+KL  NKFADL+N+E+ S YL
Sbjct: 63  WLVKHHKNYNALGEKETRFGIFKDNVGFVDRHNSMRNQSYKLGLNKFADLTNDEYRSLYL 122

Query: 124 G----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
                  +  NE  + S +++      LP SVDWR  GAV PVKDQGQCGSCWAFS V A
Sbjct: 123 SGKMMKRERKNEDGFRSDRFVFEDGDHLPESVDWRDRGAVAPVKDQGQCGSCWAFSTVGA 182

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+ TG+L+SLSEQELVDCD N  NQGCNGG M+ AFEFI K GG+ TEDDYPY+G
Sbjct: 183 VEGINKIVTGELISLSEQELVDCD-NGYNQGCNGGLMDYAFEFIVKNGGIDTEDDYPYKG 241

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            +  C  ++     VTI GYE +P                         AFQLY  GVF 
Sbjct: 242 VDGLCDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGVFT 301

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG +L+HGV  VGYG ++G+ YW+V+NSWG  WGE+GYIR+ RN  S++ G CGI MQ
Sbjct: 302 GQCGTELDHGVVAVGYGSENGKDYWIVRNSWGPDWGESGYIRLERNVASTSTGKCGIAMQ 361

Query: 333 ASYPVK 338
           ASYP K
Sbjct: 362 ASYPTK 367


>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score =  303 bits (776), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 215/345 (62%), Gaps = 36/345 (10%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M L + ++ + LL ++G+ A   S+   +     SM ER E+W+  Y R Y    E +RR
Sbjct: 1   MALESKIICITLL-IMGVWA---SQALSRTLHEVSMSERHEDWMGLYGRTYKDIAEKERR 56

Query: 83  FGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL- 140
           F I+  NV+YI+ +NS  N  +KL+ N+FAD +NEEF ++  GYN   + PR   +    
Sbjct: 57  FKIFKENVEYIESVNSAGNRRYKLSINEFADQTNEEFKASRNGYNMS-SRPRSSEITSFR 115

Query: 141 -----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
                 +P+S+DWRK+GAVTP+KDQGQCG CWAFSAVAA+EG+ +LKTG+L+SLSEQELV
Sbjct: 116 YENVAAVPSSMDWRKKGAVTPIKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELV 175

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCD + E+QGC GG M+ AFEFI   GG+TTE +YPY+G +  C   K    A  I  YE
Sbjct: 176 DCDTSGEDQGCGGGLMDSAFEFIIGNGGLTTEANYPYKGVDATCNKKKAASSAAKIKNYE 235

Query: 256 AIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DH 292
            +PA                         FQ YS GVF   CG +L+HGVT VGYG+ D 
Sbjct: 236 DVPANSEAALLKAVAQHPVSVAIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGKTDD 295

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G KYWLVKNSWGT WGE GYI M R+   ++ G+CGI M+ASYP 
Sbjct: 296 GTKYWLVKNSWGTGWGEDGYIWMERD-IGADEGLCGIAMEASYPT 339


>gi|255568299|ref|XP_002525124.1| cysteine protease, putative [Ricinus communis]
 gi|223535583|gb|EEF37251.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  303 bits (775), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 212/345 (61%), Gaps = 32/345 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M ++ +   L + L +VL + A    +   ++    +M ER E W+ ++ + Y  ++E  
Sbjct: 1   MALLCKGQFLLIALFFVLAMWA---DQASTRELHESTMVERHEKWMAKHGKVYKDDEEKL 57

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR----WP 135
           RRF I+ +NV++I+  N+  N S+ L  N+FADL+NEEF +++ GY +P +  R    + 
Sbjct: 58  RRFQIFKNNVEFIESSNAAGNNSYMLGINRFADLTNEEFRASWNGYKRPLDASRIVTPFK 117

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
                 LP S+DWR++GAVT +KDQ +CGSCWAFSAVAA EG++KL+TGKLVSLSEQELV
Sbjct: 118 YENVTALPYSMDWRRKGAVTSIKDQRECGSCWAFSAVAATEGVHKLRTGKLVSLSEQELV 177

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCDV  E++GC GG ME AF+FI + GG+TTE +Y YRG++ +C T K   H   ITGY+
Sbjct: 178 DCDVKGEDKGCQGGLMEDAFKFIKRNGGITTEANYAYRGRDGKCDTKKEASHVAKITGYQ 237

Query: 256 AIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDH 292
            +P                         +FQ Y  G++   CG  LNHGV  VGYG    
Sbjct: 238 VVPENSEAALLKAVAHQPVSVSIDAGSMSFQFYQSGIYAGSCGSDLNHGVAAVGYGTSSS 297

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G KYW+VKNSWG  WGE GY+RM R+  +S  G+CGI M  SYP 
Sbjct: 298 GSKYWIVKNSWGPEWGERGYVRMKRD-ITSRKGLCGIAMDCSYPT 341


>gi|116786779|gb|ABK24233.1| unknown [Picea sitchensis]
          Length = 463

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 209/351 (59%), Gaps = 43/351 (12%)

Query: 29  VLSLFLLWVLGIPAGAWSE------GYPQK--YDPQSMEERFENWLKQYSREYGSEDEWQ 80
           +L LF +  L   AG+ S       GY  K   +  ++ E +E WL Q+ + Y    E Q
Sbjct: 3   ILLLFAVLALSAMAGSASRADFSIIGYDSKDLREDDAIMELYELWLAQHKKAYNGLGEKQ 62

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGY---------NKPYN 130
            RF ++  N  YI   N+Q N S+KL  N+FADLS+EEF +TYLG          N P  
Sbjct: 63  NRFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFKATYLGAKLDTKKRLSNSP-- 120

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
            PR+       LP S+DWR++GAVT VKDQG CGSCWAFS VAAVEGIN++ TG L SLS
Sbjct: 121 SPRYQYSDGEDLPESIDWREKGAVTAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLS 180

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDCD  S NQGCNGG M+ AF+FI   GG+ +EDDYPY+  +  C   +   H VT
Sbjct: 181 EQELVDCDT-SYNQGCNGGLMDYAFQFIINNGGLDSEDDYPYKANDGSCDAYRKNAHVVT 239

Query: 251 ITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I  YE +P                      +  AFQ Y  GVF   CG QL+HGVT+VGY
Sbjct: 240 IDDYEDVPENDEKSLKKAAANQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGY 299

Query: 289 GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           G + G  YW+VKNSWG SWGE G+IR+ RN    + G+CGI M+ASYP+K+
Sbjct: 300 GSESGTDYWIVKNSWGKSWGEKGFIRLQRNIEGVSTGMCGIAMEASYPLKK 350


>gi|1208549|gb|AAC49455.1| Pseudotzain [Pseudotsuga menziesii]
          Length = 454

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 167/349 (47%), Positives = 211/349 (60%), Gaps = 39/349 (11%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQ--KYDPQ------SMEERFENWLKQYSREYGSEDEWQ 80
           +L LF +  L   AG+ S        YD Q      ++ E +E WL Q+ + Y   DE Q
Sbjct: 3   ILLLFAVLALSAMAGSASRADFSIISYDSQDLIGDDAIMELYELWLAQHKKAYNGLDEKQ 62

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLG--YNKPYNEPRWPSV 137
           ++F ++  N  YI   N+Q N S+KL  N+FADLS+EEF + YLG   +      R PS 
Sbjct: 63  KKFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFKAAYLGTKLDAKKRLSRSPSP 122

Query: 138 QYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           +Y       LP S+DWR++GAVT VK+QG CGSCWAFS VAAVEGIN++ TG L SLSEQ
Sbjct: 123 RYQYSVGEDLPESIDWREKGAVTAVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 182

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCD  S NQGCNGG M+ AF+FI   GG+ +EDDYPY+  N  C   +   H VTI 
Sbjct: 183 ELVDCDT-SYNQGCNGGLMDYAFQFIISNGGLDSEDDYPYKANNGSCDAYRKNAHVVTID 241

Query: 253 GYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
            YE +P                      +  AFQ Y  GVF   CG QL+HGVT+VGYG 
Sbjct: 242 DYEDVPENDEKSLKKAAANQPISVAIEASGRAFQFYESGVFTSNCGTQLDHGVTLVGYGS 301

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           + G  YWLVKNSWG SWGE G+I++ RN   ++ G+CGI M+ASYPVK+
Sbjct: 302 ESGIDYWLVKNSWGNSWGEKGFIKLQRNLEGASTGMCGIAMEASYPVKK 350


>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 163/341 (47%), Positives = 200/341 (58%), Gaps = 32/341 (9%)

Query: 27  NAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEWQRRFGI 85
           N     F++  L I  GAW+     +  P+ SM ER E W+ QY R Y  E E   RF I
Sbjct: 22  NMAFKHFMIAAL-ILLGAWACQATSRTLPEASMFERHEQWMIQYGRVYKDEAEKSVRFQI 80

Query: 86  YSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLGY-----NKPYNEPRWPSVQY 139
           +  NV++I+  N     S+KL  N+FAD +NEEF ++  GY     ++P     +     
Sbjct: 81  FMDNVKFIEEFNKDGRQSYKLAVNEFADQTNEEFQASRNGYKMAVSSRPSQTTLFRYENV 140

Query: 140 LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
             +P+S+DWRK+GAVTPVKDQGQCGSCWAFS +AA EGI KLKTGKL+SLSEQELVDCD 
Sbjct: 141 TAVPSSMDWRKKGAVTPVKDQGQCGSCWAFSTIAATEGITKLKTGKLISLSEQELVDCDK 200

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA 259
             E+QGC GGYME  FEFI K  G+  E  YPY   +  C + +    A  I+GYE +PA
Sbjct: 201 TGEDQGCEGGYMEDGFEFIVKNKGIALEASYPYTAADGTCNSKEEASRAAKISGYEKVPA 260

Query: 260 R----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKY 296
                                   AFQ YS GVF   CG  L+HGVT VGYG+   G KY
Sbjct: 261 NSETALLKAVANQPVSVSIDASGVAFQFYSSGVFTGECGTDLDHGVTAVGYGKTSDGTKY 320

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           WLVKNSWG SWG++GYI M R   +   G+CGI M ASYP 
Sbjct: 321 WLVKNSWGASWGDSGYIMMQRGVAAKG-GLCGIAMDASYPT 360


>gi|356515116|ref|XP_003526247.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 333

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/333 (49%), Positives = 200/333 (60%), Gaps = 53/333 (15%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M+ RF+ WLK     Y  ++EW+ RF IY +NV+YI    SQ  S+ LTDNKFADL+NEE
Sbjct: 1   MKVRFDRWLKXNGXNYEDKEEWEIRFVIYQANVEYIGCKKSQKNSYNLTDNKFADLTNEE 60

Query: 118 FISTYLGY-NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG------------ 164
           F+STYLG+  +     R+   ++  LP S DWRKEGAVT +KDQG CG            
Sbjct: 61  FVSTYLGFATRLIPHTRFKYHEHGNLPXSKDWRKEGAVTDIKDQGNCGKHSTWFSPEISH 120

Query: 165 -----------------SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCN 207
                            S WAFS VAAVE INK+K+GKLVSLSEQELVD DV ++NQGC 
Sbjct: 121 NLRNILTNYNTINFRDISFWAFSVVAAVERINKIKSGKLVSLSEQELVDYDVANKNQGCE 180

Query: 208 GGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------- 260
           GG M+  F FI K GG+TT  DYPY G +  C  +K  HHAV I+GYE  P++       
Sbjct: 181 GGLMDTTFAFIKKNGGLTTSKDYPYEGVDGSCNKEKALHHAVNISGYERAPSKDEAMLKV 240

Query: 261 ---------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGT 305
                          YAFQLYS GVF   CG +LNHGVT+VGY +   +KY  VKNS G 
Sbjct: 241 AAANQPISVAIDAGGYAFQLYSQGVFSGVCGKKLNHGVTIVGYDKGTFDKYRTVKNSXGA 300

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            WGE+GYIRM R++     G CGI M+ASYP+K
Sbjct: 301 DWGESGYIRMKRDA-FDKAGTCGIAMKASYPLK 332


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 158/359 (44%), Positives = 215/359 (59%), Gaps = 41/359 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSE----GYPQKYDPQS-------MEERFENWLKQY 69
           M +   ++ +++FL  +LG+ + +  +    GY + +  +S       +   +E WL ++
Sbjct: 1   MGLCRSSSSMAVFLFLLLGLASASAXDMSIIGYDETHGDKSSWRTDEDVMAVYEAWLAKH 60

Query: 70  SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPY 129
            + Y +  E +RRF I+  N+++ID  N++N ++K+  N+FADL+NEE+ S YLG     
Sbjct: 61  GKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSMYLGTRTAA 120

Query: 130 NE-------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
                     R+       LP SVDWRK+GAV  VKDQG CGSCWAFS +AAVEGINK+ 
Sbjct: 121 KRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGINKIV 180

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TG L+SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +E+DYPY+  + RC   
Sbjct: 181 TGGLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRCDQY 239

Query: 243 KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLN 280
           +     VTI GYE +P                          FQLY  G+F   CG  L+
Sbjct: 240 RKNAXVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQLYQSGIFTGRCGTALD 299

Query: 281 HGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           HGVT VGYG ++G  YW+VKNSWG SWGE GYIRM R+  +S  G CGI M+ASYP+K+
Sbjct: 300 HGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEASYPIKK 358


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 168/367 (45%), Positives = 217/367 (59%), Gaps = 53/367 (14%)

Query: 6   FIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENW 65
           F+A +  L + +AIDM ++  N                      P++ + +++   +E W
Sbjct: 10  FLATFYFLSVCLAIDMSIIDYNLKHGQV----------------PERTEAETLR-LYEMW 52

Query: 66  LKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLG 124
           L +Y + Y +  E +RRF I+  N++++D  NS  N S+KL  NKFADLSNEE+ + YLG
Sbjct: 53  LVKYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSNEEYRAAYLG 112

Query: 125 YN-----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
                  +    P+  S +YL      LP SVDWR++GAV PVKDQGQCGSCWAFS V A
Sbjct: 113 TRMDGKRRLLGGPK--SARYLFKDGDDLPESVDWREKGAVAPVKDQGQCGSCWAFSTVGA 170

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGIN++ TG L SLSEQELVDCD    NQGCNGG M+ AFEFI K GG+ TE+DYPY+ 
Sbjct: 171 VEGINQIVTGNLTSLSEQELVDCD-KVYNQGCNGGLMDYAFEFIMKNGGIDTEEDYPYKA 229

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            +  C  ++     VTI GYE +P                         AFQLY  GVF 
Sbjct: 230 VDSMCDPNRKNARVVTIDGYEDVPQNDEKSLRKAVANQPVSVAIEAGGRAFQLYQSGVFT 289

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG QL+HGV  VGYG ++G  YW+V+NSWG +WGE GYIRM RN  S+  G CGI M+
Sbjct: 290 GSCGTQLDHGVVAVGYGTENGVDYWVVRNSWGPAWGENGYIRMERNVASTETGKCGIAME 349

Query: 333 ASYPVKR 339
           ASYP K+
Sbjct: 350 ASYPTKK 356


>gi|3980198|emb|CAA46863.1| thiolprotease [Pisum sativum]
          Length = 464

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 215/351 (61%), Gaps = 35/351 (9%)

Query: 22  RMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEE---RFENWLKQYSREYGSEDE 78
           ++ +    L+  L   L +   ++ + +P K  P++ ++    +E WL ++ + Y +  E
Sbjct: 4   KLTILFITLTFTLSLALDMCIISYDKTHPDKSTPRTNDQVLTMYEEWLVKHGKNYNALGE 63

Query: 79  WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGY-------NKPYNE 131
            ++RF I+  N+ +ID  NS+NLSF+L  N+FADL+NEE+ + +LG        N+  N 
Sbjct: 64  KEKRFEIFKDNLGFIDEHNSKNLSFRLGLNRFADLTNEEYRTRFLGTRINPNRRNRKVNS 123

Query: 132 P--RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
              R+ +     LP SVDWRKEGAV  VKDQG CGSCWAFSA+AAVEG+NKL TG L+SL
Sbjct: 124 QTNRYATRVGDKLPESVDWRKEGAVVGVKDQGSCGSCWAFSAIAAVEGVNKLATGDLISL 183

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELVDCD  S N+GCNGG M+ AFEFI  +  +T E+DYPYR  + RC  ++     V
Sbjct: 184 SEQELVDCDT-SYNEGCNGGLMDYAFEFIINMVALTPEEDYPYRAIDGRCDQNRKNAKVV 242

Query: 250 TITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           +I  YE +PA                         FQLY  GVF   CG  L+HGV  VG
Sbjct: 243 SIDQYEDVPAYDEGALKKAVANQVIAVAVEGGGREFQLYDSGVFTGRCGTALDHGVAAVG 302

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG ++G+ YW+V+NSWG SWGEAGYIR+ RN  +S  G CGI ++ SYP+K
Sbjct: 303 YGTENGKDYWIVRNSWGGSWGEAGYIRLERNLATSKSGKCGIAIEPSYPIK 353


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 197/304 (64%), Gaps = 30/304 (9%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E W+ ++ +   S  E  RRF I+  N+++ID  N +NLS++L   KFADL+N+E+ S 
Sbjct: 42  YEEWVVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSM 101

Query: 122 YLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
           YLG ++   +    S++Y       +P SVDWRKEGAV  VKDQG CGSCWAFS + AVE
Sbjct: 102 YLG-SRLKRKATKTSLRYEARVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVE 160

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           GINK+ TG L+SLSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ TE+DYPY+G +
Sbjct: 161 GINKIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYKGVD 219

Query: 237 DRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEY 274
            RC   +     VTI  YE +PA                        AFQLY  G+FD  
Sbjct: 220 GRCDQTRKNAKVVTIDSYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIFDGI 279

Query: 275 CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
           CG  L+HGV  VGYG ++G+ YW+VKNSWGTSWGE+GYIRM RN  SS  G CGI ++ S
Sbjct: 280 CGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASS-AGKCGIAVEPS 338

Query: 335 YPVK 338
           YP+K
Sbjct: 339 YPIK 342


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/307 (50%), Positives = 200/307 (65%), Gaps = 31/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E+WL ++ + Y S  E +RRF ++  N+++ID  NS+N ++++  N+FADL+NEE+ S 
Sbjct: 42  YEDWLVKHGKAYNSLGEKERRFEVFKDNLRFIDEHNSENRTYRVGLNRFADLTNEEYRSM 101

Query: 122 YLGY--NKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           YLG       N+ R  S +Y       LP SVDWRKEGAV  VKDQG CGSCWAFSAVAA
Sbjct: 102 YLGALSGIRRNKLRKISDRYTPRVGDSLPDSVDWRKEGAVVGVKDQGSCGSCWAFSAVAA 161

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+ TG L+SLSEQELVDCD NS N+GCNGG M+  FEFI   GG+ +E+DYPY  
Sbjct: 162 VEGINKIVTGDLISLSEQELVDCD-NSYNEGCNGGLMDYGFEFIINNGGIDSEEDYPYLA 220

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
           ++ RC T +     V+I  YE +P                          FQLYS GVF 
Sbjct: 221 RDGRCDTYRKNARVVSIDSYEDVPVNNEAALQKAVANQPVSVAIEAGGRDFQLYSSGVFS 280

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RMARN      GICGI M+
Sbjct: 281 GRCGTALDHGVVAVGYGTENGQDYWIVRNSWGKSWGESGYLRMARNIRKP-TGICGIAME 339

Query: 333 ASYPVKR 339
           ASYP+K+
Sbjct: 340 ASYPIKK 346


>gi|118627554|emb|CAL64936.1| putative cysteine protease 8 [Trifolium pratense]
          Length = 344

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 205/338 (60%), Gaps = 34/338 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL LL+ LG+ A    +   +     SM ER   W+ QY + Y    E + RF I+  N
Sbjct: 10  ISLALLFCLGLFA---IQVTSRTLQDDSMYERHGQWMSQYGKIYKDHQERETRFKIFKEN 66

Query: 90  VQYIDYINSQN--LSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LGL 142
           V YI+  N+ +   S+KL  N+FADL+NEEFI++   +         R  S +Y    G+
Sbjct: 67  VNYIETFNNADDTKSYKLGINQFADLTNEEFIASRNKFKGHMCSSIMRTTSFKYENVSGI 126

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P++VDWRK+GAVTPVK+QGQCG CWAFSAVAA EGI+KL TGKL+SLSEQELVDCD    
Sbjct: 127 PSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGV 186

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           +QGC GG M+ AF+FI +  G++TE  YPY G +  C  +K    AVTITGYE +PA   
Sbjct: 187 DQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGTCNANKASVQAVTITGYEDVPANSE 246

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLV 299
                                 FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLV
Sbjct: 247 QALQKAVANQPISVAIDASGSDFQFYKSGVFTGACGTELDHGVTAVGYGVSNDGTKYWLV 306

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GYI M R   ++  GICGI MQASYP 
Sbjct: 307 KNSWGTDWGEEGYIMMQRGIEAAE-GICGIAMQASYPT 343


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 158/357 (44%), Positives = 214/357 (59%), Gaps = 39/357 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAG------AWSEGYPQKYDPQSMEER---FENWLKQYSR 71
           M +   ++ +++FL  +LG+ +        + E +  K   ++ E+    +E WL ++ +
Sbjct: 1   MGLCRSSSSMAVFLFLLLGLASALDMSIIGYDETHGDKSSWRTDEDVMAVYEAWLAKHGK 60

Query: 72  EYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE 131
            Y +  E +RRF I+  N+++ID  N++N ++K+  N+FADL+NEE+ S YLG       
Sbjct: 61  SYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSMYLGTRTAAKR 120

Query: 132 -------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTG 184
                   R+       LP SVDWRK+GAV  VKDQG CGSCWAFS +AAVEGINK+ TG
Sbjct: 121 RSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGINKIVTG 180

Query: 185 KLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 244
            L+SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +E+DYPY+  + RC   + 
Sbjct: 181 GLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRCDQYRK 239

Query: 245 KHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHG 282
               VTI GYE +P                          FQLY  G+F   CG  L+HG
Sbjct: 240 NAKVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQLYQSGIFTGRCGTALDHG 299

Query: 283 VTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VT VGYG ++G  YW+VKNSWG SWGE GYIRM R+  +S  G CGI M+ASYP+K+
Sbjct: 300 VTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEASYPIKK 356


>gi|144905116|dbj|BAF56430.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 160/336 (47%), Positives = 200/336 (59%), Gaps = 31/336 (9%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + SL LL V G  +    E   +  +  SM ER E W+ QY + Y    E + R  I+  
Sbjct: 9   ITSLTLLLVFGFLS---FEANARTLEDASMHERHEQWMAQYGKVYKDSYEKELRSKIFKE 65

Query: 89  NVQYID-YINSQNLSFKLTDNKFADLSNEEFIS-TYLGYNKPYNEPRWPSVQY---LGLP 143
           NVQ I+ + N+ N S+KL  N+FADL+NEEF +      +   N  R P+ +Y     +P
Sbjct: 66  NVQRIEAFNNAGNKSYKLGINQFADLTNEEFKARNRFKGHMCSNSTRTPTFKYEHVTSVP 125

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           AS+DWR++GAVTP+KDQGQCG CWAFSAVAA EGI KL TGKL+SLSEQELVDCD    +
Sbjct: 126 ASLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVD 185

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--- 260
           QGC GG M+ AF+FI +  G+ TE  YPY+G +  C  +     A +I G+E +PA    
Sbjct: 186 QGCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDATCNANAEAKDAASIKGFEDVPANSES 245

Query: 261 -------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                                FQ YS GVF   CG +L+HGVT VGYG D G KYWLVKN
Sbjct: 246 ALLKAVANQPISVAIDASGSEFQFYSSGVFTGSCGTELDHGVTAVGYGSDGGTKYWLVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG  WGE GYIRM R+  +   G+CG  MQASYP 
Sbjct: 306 SWGEQWGEQGYIRMQRDVAAEE-GLCGFAMQASYPT 340


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/366 (45%), Positives = 217/366 (59%), Gaps = 51/366 (13%)

Query: 5   LFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFEN 64
           +F+ ++ +  L  A DM ++  +   +    W               + D + M   +E 
Sbjct: 11  MFVLLFLSFTLSSASDMSIISYDQTHATKSSW---------------RTDDEVMA-IYEE 54

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG 124
           WL +  + Y +  E ++RF ++  N+++ID  NS+N ++KL  N FADL+NEE+ STYLG
Sbjct: 55  WLVKQGKVYNALGEREKRFQVFKDNLRFIDEHNSENRTYKLGLNGFADLTNEEYRSTYLG 114

Query: 125 YN--KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
                  N  R  S +Y       LP SVDWRKEGAV  VKDQG CGSCWAFS +AAVEG
Sbjct: 115 ARGGMKRNRLRKTSDRYAPRVGESLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEG 174

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
           INK+ TG L+SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ TE+DYPY  ++ 
Sbjct: 175 INKIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYLARDG 233

Query: 238 RCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDEYC 275
           RC T +     VTI  YE +P                          FQ Y+ G+F   C
Sbjct: 234 RCDTYRKNAKVVTIDDYEDVPVNSETALQKAVANQPVSVAIEAGGRDFQFYASGIFSGRC 293

Query: 276 GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR--NSPSSNIGICGILMQA 333
           G QL+HGV  VGYG ++G+ YW+V+NSWG SWGE GY+RMAR  NSP+   GICGI M+A
Sbjct: 294 GTQLDHGVAAVGYGTENGKDYWIVRNSWGKSWGENGYLRMARSINSPT---GICGIAMEA 350

Query: 334 SYPVKR 339
           SYP+K+
Sbjct: 351 SYPIKK 356


>gi|224114698|ref|XP_002316833.1| predicted protein [Populus trichocarpa]
 gi|222859898|gb|EEE97445.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/312 (50%), Positives = 199/312 (63%), Gaps = 43/312 (13%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNEEF 118
           ER E W+ QY R Y    E +RR  I+ +NV++I+  N      +KL+ N+FADL+NEEF
Sbjct: 2   ERHETWMAQYGRAYKGHVEKERRLNIFKNNVEFIESFNKVGKKPYKLSVNEFADLTNEEF 61

Query: 119 ISTYLGY----------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            ++  GY           KP+   R+ +V    +P+++DWRK+GAVTP+KDQGQCG CWA
Sbjct: 62  QASRNGYKMSAHLSSSSTKPF---RYENVS--AVPSTMDWRKKGAVTPIKDQGQCGCCWA 116

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAA EGI +L TGKL+SLSEQELVDCD + E+QGCNGG M+ AF+FI +  G+TTE 
Sbjct: 117 FSAVAATEGITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFDFIIQNKGLTTEA 176

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           +YPY+G +  C + K    A  ITGYE +PA                        AFQ Y
Sbjct: 177 NYPYQGADGACNSGKA---AAKITGYEDVPANSEAALLKAVANQPVSVAIDAGGSAFQFY 233

Query: 267 SHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           S GVF   CG  L+HGVT VGYG  D G KYWLVKNSWGTSWGE GYIRM R+  +   G
Sbjct: 234 SSGVFTGDCGTDLDHGVTAVGYGMSDDGTKYWLVKNSWGTSWGENGYIRMERDIDAQE-G 292

Query: 326 ICGILMQASYPV 337
           +CGI M+ASYP 
Sbjct: 293 LCGIAMEASYPT 304


>gi|357477459|ref|XP_003609015.1| Cysteine proteinase [Medicago truncatula]
 gi|355510070|gb|AES91212.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 160/338 (47%), Positives = 204/338 (60%), Gaps = 34/338 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           ++L  ++ LG+ A    +   +     SM ER E W+ QYS+ Y    E + R  I+++N
Sbjct: 11  IALTFIFCLGLCA---IQVTSRSLQVDSMYERHEQWMSQYSKVYKDPQEREERHKIFTAN 67

Query: 90  VQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GL 142
           V YI+  N  + N  +KL  N+FADL+NEEFI++   +          +  +       +
Sbjct: 68  VNYIEVFNNDANNKLYKLGINQFADLTNEEFIASRNKFKGHMCSSIAKTTTFKYENVSAI 127

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P++VDWRK+GAVTPVK+QGQCG CWAFSAVAA EGI KL TGKLVSLSEQELVDCD    
Sbjct: 128 PSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGITKLSTGKLVSLSEQELVDCDTKGV 187

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           +QGC GG M+ AF+FI +  G++TE  YPY+G +  C  +K   HA TITGYE +PA   
Sbjct: 188 DQGCEGGLMDDAFKFIIQNHGLSTEAAYPYQGVDGTCNANKASIHAATITGYEDVPANNE 247

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLV 299
                                 FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLV
Sbjct: 248 QALQKAVANQPISVAIDASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVGNDGTKYWLV 307

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GYIRM R   ++  G+CGI MQASYP 
Sbjct: 308 KNSWGTDWGEEGYIRMQRGVDAAE-GLCGIAMQASYPT 344


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 30/313 (9%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
            ++ E +E WL ++ R Y   DE Q+RF ++  N  YI   N  N S+KL  N+FADLS+
Sbjct: 36  DAIMELYELWLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEHNQGNRSYKLGLNQFADLSH 95

Query: 116 EEFISTYLG--YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           EEF +TYLG   +      R PS +Y       LP S+DWR++GAVT VKDQG CGSCWA
Sbjct: 96  EEFKATYLGAKLDTKKRLSRPPSRRYQYSDGEDLPESIDWREKGAVTSVKDQGSCGSCWA 155

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS VAAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI   GG+ +E+
Sbjct: 156 FSTVAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIINNGGLDSEE 214

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
           DYPY   +  C + +   H VTI  YE +P                      +   FQ Y
Sbjct: 215 DYPYTAYDGSCDSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFY 274

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
             GVF   CG QL+HGVT+VGYG + G  YW VKNSWG SWGE G+IR+ RN   ++ G+
Sbjct: 275 DSGVFTSTCGTQLDHGVTLVGYGSESGTDYWTVKNSWGKSWGEEGFIRLQRNIEVASTGM 334

Query: 327 CGILMQASYPVKR 339
           CGI M+ASYPVK+
Sbjct: 335 CGIAMEASYPVKK 347


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 163/349 (46%), Positives = 213/349 (61%), Gaps = 37/349 (10%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSE-GYPQKYDPQS------MEERFENWLKQYSREYGSE 76
           +L +A + LFL  ++   A   S   Y + +   S      +   +E WL ++ +   S 
Sbjct: 3   LLNSATVILFLTMIVVSSAMDMSIISYDKNHHTVSSRSDAEVSRLYEEWLVKHGKAQNSL 62

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPS 136
            E  RRF I+  N+++ID  N +NLS++L   KFADL+N+E+ S YLG ++   +    S
Sbjct: 63  TEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLG-SRLKRKATKSS 121

Query: 137 VQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSE 191
           ++Y       +P SVDWRKEGAV  VKDQG CGSCWAFS + AVEGINK+ TG L++LSE
Sbjct: 122 LRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIVTGDLITLSE 181

Query: 192 QELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTI 251
           QELVDCD  S N+GCNGG M+ AFEFI   GG+ TE+DYPY+G + RC   +     VTI
Sbjct: 182 QELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDGRCDQTRKNAKVVTI 240

Query: 252 TGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
             YE +PA                        AFQLY  G+FD  CG  L+HGV  VGYG
Sbjct: 241 DLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIFDGICGTDLDHGVVAVGYG 300

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            ++G+ YW+VKNSWGTSWGE+GYIRM RN  SS  G CGI ++ SYP+K
Sbjct: 301 TENGKDYWIVKNSWGTSWGESGYIRMERNIASS-AGKCGIAVEPSYPIK 348


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 201/313 (64%), Gaps = 34/313 (10%)

Query: 58  MEERFENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +E  +E W+ ++ ++  +++    E  +RF I+  N+++ID  N++NLS+KL   +FADL
Sbjct: 46  VERIYEAWMVEHGKKKMNQNGLGAEKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADL 105

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWA 168
           +NEE+ S YLG  KP       S +Y       LP SVDWRKEGAV  VKDQG CGSCWA
Sbjct: 106 TNEEYRSMYLGA-KPTKRVLKTSDRYQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWA 164

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS + AVEGINK+ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI K GG+ TE 
Sbjct: 165 FSTIGAVEGINKIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIKNGGIDTEA 223

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY+  + RC  ++     VTI  YE +P                         AFQLY
Sbjct: 224 DYPYKAADGRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLY 283

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S GVFD  CG +L+HGV  VGYG ++G+ YW+V+NSWG  WGE+GYI+MARN  +   G 
Sbjct: 284 SSGVFDGLCGTELDHGVVAVGYGTENGKDYWIVRNSWGNRWGESGYIKMARNIEAPT-GK 342

Query: 327 CGILMQASYPVKR 339
           CGI M+ASYP+K+
Sbjct: 343 CGIAMEASYPIKK 355


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 154/304 (50%), Positives = 196/304 (64%), Gaps = 30/304 (9%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ +   S  E  RRF I+  N+++ID  N +NLS++L   KFADL+N+E+ S 
Sbjct: 42  YEEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSM 101

Query: 122 YLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
           YLG ++   +    S++Y       +P SVDWRKEGAV  VKDQG CGSCWAFS + AVE
Sbjct: 102 YLG-SRLKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVE 160

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           GINK+ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ TE+DYPY+G +
Sbjct: 161 GINKIVTGDLITLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVD 219

Query: 237 DRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEY 274
            RC   +     VTI  YE +PA                        AFQLY  G+FD  
Sbjct: 220 GRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIFDGI 279

Query: 275 CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
           CG  L+HGV  VGYG ++G+ YW+VKNSWGTSWGE+GYIRM RN  SS  G CGI ++ S
Sbjct: 280 CGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASS-AGKCGIAVEPS 338

Query: 335 YPVK 338
           YP+K
Sbjct: 339 YPIK 342


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 212/351 (60%), Gaps = 42/351 (11%)

Query: 29  VLSLFLLWVLGIPAGAWSE--GYPQKYDPQSMEER--------FENWLKQYSREYGSE-- 76
           V  L L  ++G+   A      Y +K+   +  ER        +E W++++ ++  S   
Sbjct: 6   VTILLLAMMIGVSYAADMSIISYDEKHHITAENERSDAEVARIYEAWMEKHGKKAQSNGL 65

Query: 77  --DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPY----N 130
             +E  +RF I+  N+++ID  N++NLS+KL   +FADL+NEE+ S YLG          
Sbjct: 66  VGEEKDQRFEIFKDNLRFIDEHNNKNLSYKLGLTRFADLTNEEYRSIYLGAKSKKRVLKT 125

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             R+       +P SVDWRKEGAV  VKDQG CGSCWAFS + AVEGINK+ TG L+SLS
Sbjct: 126 SDRYQPRVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLS 185

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDCD  S NQGCNGG M+ AFEFI K GG+ TE+DYPY+  + RC   +     VT
Sbjct: 186 EQELVDCDT-SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQTRKNAKVVT 244

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I  YE +P                         AFQLYS GVFD  CG +L+HGV  VGY
Sbjct: 245 IDAYEDVPENNEAALKKTLANQPISVAIEAGGRAFQLYSSGVFDGICGTELDHGVVAVGY 304

Query: 289 GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           G ++G+ YW+V+NSWG SWGE+GYI+MARN  +   G CGI M+ASYP+K+
Sbjct: 305 GTENGKDYWIVRNSWGGSWGESGYIKMARN-IAEPTGKCGIAMEASYPIKK 354


>gi|357167190|ref|XP_003581045.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 415

 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 149/334 (44%), Positives = 197/334 (58%), Gaps = 30/334 (8%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FL+ +L       +       D  SM  R E W+ +Y R Y    E  +R  ++ +NV +
Sbjct: 82  FLIAILACTCAVSALAARDLTDDLSMVARHEQWMAKYGRVYNDVAEKAQRLEVFKANVAF 141

Query: 93  IDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWPSVQYL-----GLPASV 146
           I+ +N+ N  F L  N+FAD++ +EF + + GY   P N+ R    +Y       LPAS+
Sbjct: 142 IELVNAGNDKFSLEANQFADMTVDEFRAAHTGYKPVPANKGRTTQFKYANVSLDALPASM 201

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR +GAVTP+KDQGQCG CWAFS VA+VEGI KL TGKL+SLSEQELVDCDV+  +QGC
Sbjct: 202 DWRAKGAVTPIKDQGQCGCCWAFSTVASVEGIVKLSTGKLISLSEQELVDCDVDGMDQGC 261

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------ 260
            GG M+ AFEFI   GG+TTE +YPY G +D C ++K  +   +I GYE +P+       
Sbjct: 262 EGGLMDNAFEFIIDNGGLTTEGNYPYTGTDDSCNSNKESNDVASIKGYEDVPSNDETSLL 321

Query: 261 ----------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSW 303
                             F+ Y  GV    CG +L+HG+  VGYG    G K+WL+KNSW
Sbjct: 322 KAVAAQPVSIAVDGGDNLFRFYKGGVLSGACGTELDHGIAAVGYGITSDGTKFWLMKNSW 381

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GTSWGE G+IRM R+      G+CG+ MQ SYP 
Sbjct: 382 GTSWGEKGFIRMERDIADEE-GLCGLAMQPSYPT 414


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 159/318 (50%), Positives = 199/318 (62%), Gaps = 39/318 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSE--DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFA 111
           D  SM  R E W+ Q+ R Y  E  D   +RF ++  NV+ I+  N    +FKL  N+FA
Sbjct: 31  DEDSM--RHEEWMSQHGRVYADEQEDHKNKRFNVFKENVERIEEFNDGK-TFKLAINQFA 87

Query: 112 DLSNEEFISTYLGYNKPY------NEP---RWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           DL+NEEF ++Y G+  P        +P   R+ +V    LP SVDWRK+GAVTPVK+QGQ
Sbjct: 88  DLTNEEFRASYNGFKGPMVLSSQITKPTPFRYENVSS-ALPVSVDWRKKGAVTPVKNQGQ 146

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CG CWAFSAVAA+EGI ++ TGKL+SLSEQELVDCD    + GC GG M+ AFEFI   G
Sbjct: 147 CGCCWAFSAVAAIEGITQISTGKLISLSEQELVDCDTKGIDHGCEGGLMDTAFEFIINNG 206

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+TTE +YPY+G++  C  +KT   AV+ITGYE +PA                       
Sbjct: 207 GLTTESNYPYKGEDGTCNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQPVSVAIEAGG 266

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF   CG +L+H VT VGYGE + G KYW+VKNSWGT WGE+GYI M ++ 
Sbjct: 267 SDFQFYSSGVFTGECGTELDHAVTAVGYGESEDGSKYWIVKNSWGTKWGESGYIEMQKDI 326

Query: 320 PSSNIGICGILMQASYPV 337
                G+CGI MQASYP 
Sbjct: 327 KVKQ-GLCGIAMQASYPT 343


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 201/313 (64%), Gaps = 34/313 (10%)

Query: 58  MEERFENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +E  +E W+ ++ ++  +++    E  +RF I+  N++YID  N++NLS+KL   +FADL
Sbjct: 46  VERIYEAWMVEHGKKKMNQNGLGAEKDQRFEIFKDNLRYIDEHNTKNLSYKLGLTRFADL 105

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWA 168
           +N+E+ S YLG  KP       S +Y       LP SVDWRKEGAV  VKDQG CGSCWA
Sbjct: 106 TNDEYRSMYLG-AKPVKRVLKTSDRYEARVGDALPDSVDWRKEGAVADVKDQGSCGSCWA 164

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS + AVEGINK+ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI K GG+ TE 
Sbjct: 165 FSTIGAVEGINKIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIKNGGIDTEA 223

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY+  + RC  ++     VTI  YE +P                         AFQLY
Sbjct: 224 DYPYKAADGRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLY 283

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S GVFD  CG +L+HGV  VGYG ++G+ YW+V+NSWG  WGE+GYI+MARN  +   G 
Sbjct: 284 SSGVFDGICGTELDHGVVAVGYGTENGKDYWIVRNSWGNRWGESGYIKMARN-IAEPTGK 342

Query: 327 CGILMQASYPVKR 339
           CGI M+ASYP+K+
Sbjct: 343 CGIAMEASYPIKK 355


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 207/321 (64%), Gaps = 33/321 (10%)

Query: 49  YPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDN 108
           YP + D Q +   +E WL ++ + Y +  E ++RF I+  N+++ID  NS + S+K+  N
Sbjct: 39  YPLRTDSQ-VRRMYEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEHNSVDRSYKVGLN 97

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRW---PSVQYL-----GLPASVDWRKEGAVTPVKDQ 160
           +FADL+NEE+ + +LG  K   + R+    S +YL      LP +VDWR++GAV PVKDQ
Sbjct: 98  RFADLTNEEYKAMFLG-TKMERKNRFLGTRSQRYLFKDGDDLPENVDWREKGAVVPVKDQ 156

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           GQCGSCWAFS V AVEGIN++ TG+L+SLSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 157 GQCGSCWAFSTVGAVEGINQIVTGELISLSEQELVDCD-KSYNQGCNGGLMDYAFEFIIN 215

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE+DYPY+  ++ C  ++     VTI GYE +P                      
Sbjct: 216 NGGIDTEEDYPYKASDNICDPNRKNAKVVTIDGYEDVPENDENSLKKAVAHQPVSVAIEA 275

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLY  GVF   CG +L+HGV  VGYG ++G  YW+V+NSWG++WGE+GYIRM RN
Sbjct: 276 GGRAFQLYKSGVFTGRCGTELDHGVVAVGYGTENGVNYWIVRNSWGSAWGESGYIRMERN 335

Query: 319 SPSSNIGICGILMQASYPVKR 339
             ++  G CGI +Q SYP K+
Sbjct: 336 VANTKTGKCGIAIQPSYPTKK 356


>gi|2414570|emb|CAB16317.1| cysteine proteinase precursor [Nicotiana tabacum]
          Length = 374

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 208/325 (64%), Gaps = 36/325 (11%)

Query: 49  YPQKYDPQSMEE----RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSF 103
           Y +K+  QS E+    R+E WL ++ R Y +  E ++RF I+  N+++I+ + NS N ++
Sbjct: 33  YARKWTLQSDEDQVKNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTY 92

Query: 104 KLTDNKFADLSNEEFISTYLGYN----KPYNEPRWPSVQYLG-----LPASVDWRKEGAV 154
           K+  N+FADL+NEE+ + YLG      + + + + PS +Y       +P SVDWRK GAV
Sbjct: 93  KVGLNQFADLTNEEYRTMYLGTKSDARRRFVKSKNPSQRYASRPNELMPHSVDWRKRGAV 152

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
            P+K+QG CGSCWAFS VAAVEGIN++ TG++++LSEQELVDCD   +N GCNGG M+ A
Sbjct: 153 APIKNQGSCGSCWAFSTVAAVEGINQIVTGEMITLSEQELVDCD-RVQNSGCNGGLMDYA 211

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------- 258
           FEFI   GG+ TE  YPYRG   RC   +  +  V+I GYE +P                
Sbjct: 212 FEFIISNGGMDTEKHYPYRGVEGRCDPVRKNYKVVSIDGYEDVPRNERALQKAVAHQPVC 271

Query: 259 -----ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYI 313
                +  AFQLYS GVF   CG +++HGV VVGYG + G  YW+V+NSWGT WGE GY+
Sbjct: 272 VAIEASGRAFQLYSSGVFTGECGEEVDHGVVVVGYGSEDGVDYWIVRNSWGTKWGENGYV 331

Query: 314 RMARNSPSSNIGICGILMQASYPVK 338
           +M RN   S++G CGI+ +ASYP K
Sbjct: 332 KMERNVKKSHLGKCGIMTEASYPTK 356


>gi|357113934|ref|XP_003558756.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 346

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 200/312 (64%), Gaps = 31/312 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNE 116
           +M  R E W+ Q+ R Y    E   R  ++ +NV +I+  N++N  F L  N+FADL+N+
Sbjct: 36  AMAARHEQWMAQFGRVYKDPAEKAHRLEVFKANVAFIESFNAENHEFWLGANQFADLTND 95

Query: 117 EFISTYL-------GYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           EF ++         G        ++  V    LPASVDWR +GAVTP+K+QGQCGSCWAF
Sbjct: 96  EFRASKTNKGIKQGGVRDAPTGFKYSDVSIDALPASVDWRTKGAVTPIKNQGQCGSCWAF 155

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SAVAA EG+ KL TGKLVSLSEQELVDCDV+  +QGC GG+M+ AF+FI K GG+TTE +
Sbjct: 156 SAVAATEGVVKLSTGKLVSLSEQELVDCDVHGVDQGCMGGWMDDAFKFIIKNGGLTTEAN 215

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYS 267
           YPY G++D+C++++T + A TI GYE +PA                         FQLY+
Sbjct: 216 YPYTGEDDKCKSNETVNVAATIKGYEDVPANDESALMKAVAHQPVSVVVDGGDMTFQLYA 275

Query: 268 HGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            GV    CG +++HG+  +GYG   +G KYWL+KNSWGT+WGE G++RMA++ P    G+
Sbjct: 276 GGVMTGSCGVEMDHGIAAIGYGATSNGTKYWLMKNSWGTTWGEKGFLRMAKDIPDKR-GM 334

Query: 327 CGILMQASYPVK 338
           CG+ M+ SYP +
Sbjct: 335 CGLAMKPSYPTE 346


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/357 (45%), Positives = 212/357 (59%), Gaps = 43/357 (12%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSE--GYPQKYDPQS-------MEERFENWLKQYSREY 73
           M L  + LSLFLL +    +        Y Q++  +S       +   +E WL ++ + Y
Sbjct: 1   MGLHRSSLSLFLLMIFTASSAVDMSIVSYDQRHADKSSWRTDDEVMAMYEAWLVKHGKAY 60

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP----- 128
            +  E ++RFGI+  N+++ID  NSQNL+++L  N+FADL+NEE+ S YLG  KP     
Sbjct: 61  NALGEKEKRFGIFKDNLRFIDEHNSQNLTYRLGLNRFADLTNEEYRSMYLGV-KPGATRV 119

Query: 129 -----YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
                    R+ +     LP  +DWRKEGAV  VKDQG CGSCWAFS +AAVEGIN++ T
Sbjct: 120 TRKVSRKSDRFAARVGDALPDFIDWRKEGAVVGVKDQGSCGSCWAFSTIAAVEGINQIVT 179

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G L+SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +E+DYPYR  + +C   +
Sbjct: 180 GDLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADQKCDQYR 238

Query: 244 TKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNH 281
              + V+I GYE +P                         AFQLY  GVF   CG  L+H
Sbjct: 239 KNANVVSIDGYEDVPENDEAALKKAVAKQPVSVAIEAGGRAFQLYQSGVFTGKCGTSLDH 298

Query: 282 GVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GV  VGYG ++G+ YW+V NSWG +WGE GYIRM RN   S+ G CGI +  SYP+K
Sbjct: 299 GVAAVGYGTENGQDYWIVGNSWGKNWGEDGYIRMERNLAGSSSGKCGIAIGPSYPIK 355


>gi|357483847|ref|XP_003612210.1| Cysteine proteinase [Medicago truncatula]
 gi|355513545|gb|AES95168.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 160/339 (47%), Positives = 207/339 (61%), Gaps = 36/339 (10%)

Query: 30  LSLFLLWVLGIPAGAWS-EGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +SL L++ LG+    W+ +   +     SM ER E W+  Y + Y    E ++RF I++ 
Sbjct: 10  ISLALVFCLGL----WAIQVTSRTLQDGSMHERHERWMNHYGKVYKDHQEREKRFKIFTE 65

Query: 89  NVQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LG 141
           N++YI+  N+   N S+KL  N+FADL+NEEF+++   +         R  + +Y     
Sbjct: 66  NMKYIEAFNNGDNNESYKLGINQFADLTNEEFVASRNKFKGHMCSSIIRTTTFKYENVSA 125

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P++VDWRK+GAVTPVK+QGQCG CWAFSAVAA EGI+KL TGKLVSLSEQELVDCD   
Sbjct: 126 IPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKG 185

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY 261
            +QGC GG M+ AF+FI +  G+ TE  YPY+G +  C  +K    A TITGYE +PA  
Sbjct: 186 VDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCNANKASIQATTITGYEDVPANN 245

Query: 262 A----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWL 298
                                  FQ Y  GVF   CG +L+HGVT VGYG  + G KYWL
Sbjct: 246 EQALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWL 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VKNSWGT WGE GYI M R   ++  G+CGI MQASYP 
Sbjct: 306 VKNSWGTDWGEEGYIMMQRGVEAAE-GLCGIAMQASYPT 343


>gi|144905112|dbj|BAF56429.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/336 (47%), Positives = 203/336 (60%), Gaps = 33/336 (9%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +L+LFLL  +GI      E +  +    S+ ER E W+ +Y + Y    E ++RF I+  
Sbjct: 11  ILALFLLLAVGISRVISRELHETE---TSLIERHEQWMAKYDKVYKDAAEKEKRFLIFKD 67

Query: 89  NVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN-EPRWPSVQY---LGLP 143
           NV++I+  N+  N  +KL  N  ADL+ EEF ++  G  + Y+ E    S +Y     +P
Sbjct: 68  NVEFIESFNAAGNKPYKLGVNHLADLTIEEFKASRNGLKRSYDYEVGTTSFKYENVTAIP 127

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ASVDWRK+GAVTP+KDQGQCGSCWAFS VAA EGI+K+ TGKLVSLSEQELVDCD    +
Sbjct: 128 ASVDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGIHKISTGKLVSLSEQELVDCDRKGTD 187

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----- 258
           QGC GGYME  FEFI K GG+TTE +YPY+  +  C+       A  I GYE +P     
Sbjct: 188 QGCEGGYMEDGFEFIIKNGGITTEANYPYKAVDGSCKN--ATAPAAQIKGYEKVPVNSEK 245

Query: 259 -----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                            A  +F  YS G+F   CG +L+HGVT VGYG  +G  YW+VKN
Sbjct: 246 ALLKAVANQPVSVSIDAADGSFMFYSSGIFTGECGTELDHGVTAVGYGRANGTDYWIVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R   +   G+CGI M +SYP 
Sbjct: 306 SWGTVWGEQGYIRMQRGIAAKE-GLCGIAMDSSYPT 340


>gi|37780047|gb|AAP32196.1| cysteine protease 8 [Trifolium repens]
          Length = 343

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 159/337 (47%), Positives = 206/337 (61%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL L++ LG+ A    +   +     SM ER   W+ QY + Y    E + RF I++ N
Sbjct: 10  ISLALVFCLGLFA---IQVTSRTLQDDSMYERHGQWMSQYGKIYKDHQERETRFKIFTEN 66

Query: 90  VQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLGYNKPY--NEPRWPSVQY---LGLP 143
           V Y++  N+ +  S+KL  N+FADL+NEEF+++   +      +  R  + +Y     +P
Sbjct: 67  VNYVEASNADDTKSYKLGINQFADLTNEEFVASRNKFKGHMCSSITRTTTFKYENVSAIP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWRK+GAVTPVK+QGQCG CWAFSAVAA EGI+KL TGKL+SLSEQELVDCD    +
Sbjct: 127 STVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG M+ AF+FI +  G++TE  YPY G +  C  +K    AVTITGYE +PA    
Sbjct: 187 QGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGTCNANKASVQAVTITGYEDVPANSEQ 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLVK
Sbjct: 247 ALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYI M R   ++  G+CGI MQASYP 
Sbjct: 307 NSWGTDWGEEGYIMMQRGVEAAE-GLCGIAMQASYPT 342


>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 339

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 158/308 (51%), Positives = 197/308 (63%), Gaps = 32/308 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNE 116
           M  R E W+ QY R Y +E E  +R+ I+  NV+YI+  N      +KL  N FADL+N+
Sbjct: 33  MAVRHEQWMAQYGRVYKNEVEKTKRYNIFKENVEYIESFNKAGTKPYKLGINAFADLTNK 92

Query: 117 EFISTYLGYNKPY----NEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           EFI++  GY  P+    N P R+ +V    +P +VDWRK+GAVTPVKDQGQCG CWAFSA
Sbjct: 93  EFIASRNGYILPHECSSNTPFRYENVS--AVPTTVDWRKKGAVTPVKDQGQCGCCWAFSA 150

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VAA+EGI KL TG L+SLSEQELVDCDV   +QGC GG M+ AF FI    G+TTE +YP
Sbjct: 151 VAAMEGITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFTFIINNKGLTTESNYP 210

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHG 269
           Y+G +  C+  K+ + A  I+GYE +PA                         FQ YS G
Sbjct: 211 YQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSDFQFYSSG 270

Query: 270 VFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG +L+HGVT VGYG  + G KYWLVKNSWGTSWGE GYIRM ++  +   G+CG
Sbjct: 271 VFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEAKE-GLCG 329

Query: 329 ILMQASYP 336
           I MQ+SYP
Sbjct: 330 IAMQSSYP 337


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 160/352 (45%), Positives = 213/352 (60%), Gaps = 42/352 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER--------FENWLKQYSREYGSEDEW 79
           A+  LF+++ L + + +  + Y    DP    ER        +E+WL ++ + Y +  E 
Sbjct: 11  AISFLFMVFSLSLASMSIID-YDLPADPLQSTERTEAHMMKMYEHWLVKHGKNYNAIGEK 69

Query: 80  QRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP--S 136
           +RRF I+  N++++D  NS    ++KL   KFADL+NEE+ + YLG      E      S
Sbjct: 70  ERRFEIFKDNLRFVDEQNSVPGRTYKLGLTKFADLTNEEYRAMYLGAKMEKKEKLRTERS 129

Query: 137 VQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
            +YL        LP+ VDWR++GAVT VKDQGQCGSCWAFS V +VEGIN++ TG L+SL
Sbjct: 130 QRYLHKAGNDDDLPSHVDWREKGAVTEVKDQGQCGSCWAFSTVGSVEGINQIVTGDLISL 189

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELVDCD  + NQGCNGG M+ AFEFI K GG+ +E DYPYR  ++ C +++   H V
Sbjct: 190 SEQELVDCD-KAYNQGCNGGLMDYAFEFIIKNGGIDSEADYPYRASDNMCDSNRKNAHVV 248

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           TI GYE +P                          FQLY  GVF   CG  L+HGV  VG
Sbjct: 249 TIDGYEDVPENDEESLKKAVANQPVSVAIEAGGREFQLYQSGVFTGRCGTNLDHGVVAVG 308

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           YG ++G  YW+V+NSWG  WGE+GYIRM RN  S++ G CGI M+ASYP K+
Sbjct: 309 YGTENGIDYWIVRNSWGPKWGESGYIRMERNVASTDTGKCGIAMEASYPTKK 360


>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
          Length = 343

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 157/337 (46%), Positives = 209/337 (62%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL L + LG+ A    +   +     S+ ER E W+  Y + Y +  E ++R  I++ N
Sbjct: 10  VSLALFFCLGLLA---IQVTSRTLQDDSIFERHEQWMTHYGKVYKNPQEREKRLRIFTEN 66

Query: 90  VQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY--LGLP 143
           ++YI+  N+   N  +KL  N+FADL+NEEFI++   +         R  + +Y    +P
Sbjct: 67  LKYIEASNNAGNNKPYKLGINQFADLTNEEFIASRNKFKGHMCSSIIRTTTFKYENTSVP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWRK+GAVTPVK+QGQCG CWAFSA+AA EGI+K+ TGKLVSLSEQELVDCD N  +
Sbjct: 127 STVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCDTNGVD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG M+ AF+FI +  G++TE  YPY+G +  C+ ++    A TITGYE +PA    
Sbjct: 187 QGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGTCKANEASTSAATITGYEDVPANNEN 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLVK
Sbjct: 247 ALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYIRM R+  ++  G+CGI MQASYP 
Sbjct: 307 NSWGTDWGEEGYIRMQRSIDAAE-GLCGIAMQASYPT 342


>gi|225446589|ref|XP_002280263.1| PREDICTED: vignain [Vitis vinifera]
          Length = 339

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 158/336 (47%), Positives = 206/336 (61%), Gaps = 35/336 (10%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +S+ LL++L     AW S+   +     SM ER E+W+ +Y R Y   +E ++RF I+  
Sbjct: 10  VSMALLFILA----AWASQATSRSLHEASMYERHEDWMARYGRMYKDANEKEKRFKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + ++KL+ N+FADL+NEEF S    + K +      + +Y     +P+
Sbjct: 66  NVARIESFNKAMDKTYKLSINEFADLTNEEFRSLRNRF-KAHICSEATTFKYENVTAVPS 124

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           ++DWRK+GAVTP+KDQ QCG CWAFSAVAA EGI ++ TGKL+SLSEQELVDCD   ENQ
Sbjct: 125 TIDWRKKGAVTPIKDQQQCGCCWAFSAVAATEGITQITTGKLISLSEQELVDCDTGGENQ 184

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC+GG M+ AF FI KI G+ +E  YPY G +  C + K  H A  I GYE +PA     
Sbjct: 185 GCSGGLMDDAFRFI-KIHGLASEATYPYEGDDGTCNSKKEAHPAAKIKGYEDVPANNEKA 243

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                             + FQ Y+ GVF   CG +L+HGV  VGYG  D G  YWLVKN
Sbjct: 244 LQKAVAHQPVAVAIDAGGFEFQFYTSGVFTGQCGTELDHGVAAVGYGIGDDGMMYWLVKN 303

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 304 SWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 338


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 153/301 (50%), Positives = 195/301 (64%), Gaps = 29/301 (9%)

Query: 66  LKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLG 124
           L ++ + Y +    ++RF I+  N+++ID  N   N SFKL  NKFADLSNEE+ S +LG
Sbjct: 11  LVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEYKSMFLG 70

Query: 125 YNKPYNEPRWPSVQY---LG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGIN 179
                +   + S ++   +G  LP SVDWR++GAV PVKDQGQCGSCWAFS VAAVEGIN
Sbjct: 71  GRMVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTVAAVEGIN 130

Query: 180 KLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC 239
           ++ TG L+SLSEQELVDCD    NQGCNGG+M+ AFEFI K GG+ TEDDYPY+G + +C
Sbjct: 131 QIATGDLISLSEQELVDCD-KGFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPYKGVDGQC 189

Query: 240 QTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGH 277
             ++     VTI G+E +P                         AFQLY  G+F+  CG 
Sbjct: 190 DQNRKNAKVVTINGFEDVPQNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGIFNGLCGT 249

Query: 278 QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            L+HGV  VGYG + G+ YW+V+NSWG +WGE GYIR+ RN  S+N G CGI MQ SYP 
Sbjct: 250 DLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQPSYPT 309

Query: 338 K 338
           K
Sbjct: 310 K 310


>gi|409190991|gb|AFV30165.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  293 bits (750), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/336 (47%), Positives = 204/336 (60%), Gaps = 32/336 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +S  L+  LG+ A   S    Q     SM+ER E W+ +Y R Y    E ++RF I+  N
Sbjct: 10  VSFALVLCLGLWAFQVSSRTLQD---ASMQERHEQWMARYGRVYKDLQEKEKRFSIFKEN 66

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY--LGLPA 144
           V YI+  N+  +  +KL  N+FADL+NEEFI+T   +    +    R  + +Y  +  P+
Sbjct: 67  VNYIEASNNAGDKPYKLGVNQFADLTNEEFIATRNKFKGHMSSSITRTTTFKYENVTAPS 126

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWR+EGAVTPVK+QG CG CWAFSAVAA EGI+KL TG LVSLSEQELVDCD +  +Q
Sbjct: 127 TVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQELVDCDTSGADQ 186

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA-- 262
           GC GG M+ AF+FI + GG+ TE  YPY+G +  C T++   H  TITGYE +P+     
Sbjct: 187 GCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGTCNTNEEATHVATITGYEDVPSNNEQA 246

Query: 263 --------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ Y  GVF   CG QL+HGV VVGYG  D G KYWLVKN
Sbjct: 247 LQQAVANQPISIAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVVGYGVSDDGTKYWLVKN 306

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG  WGE GYIRM R+  +   G+CG+ MQ SYP 
Sbjct: 307 SWGADWGEEGYIRMQRDVDAPE-GLCGLAMQPSYPT 341


>gi|28192373|gb|AAK07730.1| CPR1-like cysteine proteinase [Nicotiana tabacum]
          Length = 374

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/325 (46%), Positives = 207/325 (63%), Gaps = 36/325 (11%)

Query: 49  YPQKYDPQSMEE----RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSF 103
           Y +K+  QS E+    R+E WL ++ R Y +  E ++RF I+  N+++I+ + NS N ++
Sbjct: 33  YARKWTLQSDEDQVKNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEEHNNSGNRTY 92

Query: 104 KLTDNKFADLSNEEFISTYLGYN----KPYNEPRWPSVQYLG-----LPASVDWRKEGAV 154
           K+  N+FADL+NEE+ + YLG      + + + + PS +Y       +P SVDWRK GAV
Sbjct: 93  KVGLNQFADLTNEEYRTMYLGTKSDARRRFVKSKNPSQRYASRPNELMPHSVDWRKRGAV 152

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
            P+K+QG CGSCWAFS VAAV GIN++ TG++++LSEQELVDCD   +N GCNGG M+ A
Sbjct: 153 APIKNQGSCGSCWAFSTVAAVGGINQIVTGEMITLSEQELVDCD-RVQNSGCNGGLMDYA 211

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------- 258
           FEFI   GG+ TE  YPYRG   RC   +  +  V+I GYE +P                
Sbjct: 212 FEFIISNGGMDTEKHYPYRGVEGRCDPVRKNYKVVSIDGYEDVPRNERALQKAVAHQPVC 271

Query: 259 -----ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYI 313
                +  AFQLYS GVF   CG +++HGV VVGYG + G  YW+V+NSWGT WGE GY+
Sbjct: 272 VAIEASGRAFQLYSSGVFTGECGEEVDHGVVVVGYGSEDGVDYWIVRNSWGTKWGENGYV 331

Query: 314 RMARNSPSSNIGICGILMQASYPVK 338
           +M RN   S++G CGI+ +ASYP K
Sbjct: 332 KMERNVKKSHLGKCGIMTEASYPTK 356


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 202/321 (62%), Gaps = 36/321 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+  + R Y +  E +RRF ++  N++Y+D  N+       SF+L
Sbjct: 34  YGERSEEEARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRL 93

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQ 160
             N+FADL+N+E+ +TYLG        R    +YL      LP SVDWR +GAV  VKDQ
Sbjct: 94  GLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEVKDQ 153

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFS +AAVEGIN++ TG ++SLSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 154 GSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 212

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE+DYPY+G + RC  ++     VTI  YE +PA                     
Sbjct: 213 NGGIDTEEDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQPISVAIEA 272

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLY+ G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM RN
Sbjct: 273 GGRAFQLYNSGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERN 332

Query: 319 SPSSNIGICGILMQASYPVKR 339
             +S+ G CGI ++ SYP+K+
Sbjct: 333 IKASS-GKCGIAVEPSYPLKK 352


>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas]
          Length = 339

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 195/308 (63%), Gaps = 32/308 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNE 116
           M  R E W+ QY R Y +E E  +RF I+  NV+YI+  N      +KL  N FADL+N+
Sbjct: 33  MVVRHEQWMAQYGRVYKTEAEKTKRFNIFKENVEYIESFNKAGTKPYKLGINAFADLTNQ 92

Query: 117 EFISTYLGYNKPY----NEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           EF ++  GY  P+    N P R+ +V    +P +VDWR +GAVTPVKDQGQCG CWAFSA
Sbjct: 93  EFKASRNGYKLPHDCSSNTPFRYENVS--SVPTTVDWRTKGAVTPVKDQGQCGCCWAFSA 150

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VAA+EGI KL TG L+SLSEQELVDCDV   +QGC GG M+ AF FI    G+TTE +YP
Sbjct: 151 VAAMEGITKLSTGNLISLSEQELVDCDVKGTDQGCEGGLMDDAFSFIINNKGLTTESNYP 210

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHG 269
           Y+G +  C+  K+ + A  I+GYE +PA                         FQ YS G
Sbjct: 211 YQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSDFQFYSSG 270

Query: 270 VFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG +L+HGVT VGYG  + G KYWLVKNSWGTSWGE GYIRM ++  +   G+CG
Sbjct: 271 VFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEAKE-GLCG 329

Query: 329 ILMQASYP 336
           I MQ+SYP
Sbjct: 330 IAMQSSYP 337


>gi|357458911|ref|XP_003599736.1| Cysteine proteinase [Medicago truncatula]
 gi|357474719|ref|XP_003607644.1| Cysteine proteinase [Medicago truncatula]
 gi|355488784|gb|AES69987.1| Cysteine proteinase [Medicago truncatula]
 gi|355508699|gb|AES89841.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/311 (47%), Positives = 194/311 (62%), Gaps = 28/311 (9%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFA 111
           Y+  S++ER E W+ ++ + Y    E ++RF I+  NV++I+  N+  N  +KL+ N  A
Sbjct: 31  YESLSLQERHEQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKLSVNHLA 90

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           DL+ +EF ++  GY K   E    S +Y     +PA+VDWR +GAVTP+KDQGQCGSCWA
Sbjct: 91  DLTLDEFKASRNGYKKIDREFTTTSFKYENVTAIPAAVDWRVKGAVTPIKDQGQCGSCWA 150

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS VAA EGIN++ TGKLVSLSEQELVDCD   E+QGC GG ME  FEFI K GG+T+E 
Sbjct: 151 FSTVAATEGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSET 210

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
           +YPY+  +  C T  T   A  ITGYE +P                      +  +F  Y
Sbjct: 211 NYPYKAADGSCNTATTTPVA-KITGYEKVPVNSEKSLLKAVANQPISVSIDASDSSFMFY 269

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S G++   CG +L+HGVT VGYG  +G  YW+VKNSWGT WGE GYIRM R   +   G+
Sbjct: 270 SSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGYIRMQRGIAAKE-GL 328

Query: 327 CGILMQASYPV 337
           CGI M +SYP 
Sbjct: 329 CGIAMDSSYPT 339


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 202/321 (62%), Gaps = 36/321 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+  + R Y +  E +RRF ++  N++Y+D  N+       SF+L
Sbjct: 34  YGERSEEEARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRL 93

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQ 160
             N+FADL+N+E+ +TYLG        R    +YL      LP SVDWR +GAV  +KDQ
Sbjct: 94  GLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEIKDQ 153

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFS +AAVEGIN++ TG ++SLSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 154 GSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 212

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE+DYPY+G + RC  ++     VTI  YE +PA                     
Sbjct: 213 NGGIDTEEDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQPISVAIEA 272

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLY+ G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM RN
Sbjct: 273 GGRAFQLYNSGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERN 332

Query: 319 SPSSNIGICGILMQASYPVKR 339
             +S+ G CGI ++ SYP+K+
Sbjct: 333 IKASS-GKCGIAVEPSYPLKK 352


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 202/320 (63%), Gaps = 36/320 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+  + R Y +  E +RR+ ++  N++YID  N+       SF+L
Sbjct: 29  YGERSXEEARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRL 88

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKDQ 160
             N+FADL+N+E+ +TYLG   +P  E     R+ +     LP SVDWR +GAV  VKDQ
Sbjct: 89  GLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAVAEVKDQ 148

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFS +AAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 149 GSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 207

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE DYPY+G + RC  ++     VTI  YE +PA                     
Sbjct: 208 NGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEA 267

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLYS G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM RN
Sbjct: 268 AGTAFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERN 327

Query: 319 SPSSNIGICGILMQASYPVK 338
             +S+ G CGI ++ SYP+K
Sbjct: 328 IKASS-GKCGIAVEPSYPLK 346


>gi|89274062|dbj|BAE80740.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 462

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/354 (43%), Positives = 216/354 (61%), Gaps = 39/354 (11%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGA-------WSEGYPQKYDPQSMEE---RFENWLKQYSRE 72
           M L +  +++ LL+ L + + A       +   +  K   ++ +E    +E+WL ++ + 
Sbjct: 1   MKLLSPSMAIALLFALFVASSALDMSIINYDATHASKSSWRTDDEVMAMYESWLVKHGKS 60

Query: 73  YGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNE 131
           Y +  E ++RF I+  N+++ID  N++ NLS+K+  N+FADL+NEE+ STYLG       
Sbjct: 61  YNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADLTNEEYRSTYLGAKSKPKL 120

Query: 132 PRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
            +  S +Y       LP SVDWR +GAV P+KDQG CGSCWAFS V AVEGIN++ TG+L
Sbjct: 121 SKVKSDRYAPRVGDSLPESVDWRAKGAVAPIKDQGSCGSCWAFSTVNAVEGINQIVTGEL 180

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
           ++LSEQELVDCD  S N+GC+GG M+  FEFI   GG+ T+ DYPY G++ RC   +   
Sbjct: 181 ITLSEQELVDCD-KSYNEGCDGGLMDYGFEFIINNGGIDTDKDYPYLGRDARCDQYRKNA 239

Query: 247 HAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVT 284
             VTI  YE +P                         AFQ Y  G+F   CG  L+HGV 
Sbjct: 240 KVVTIDSYEDVPVNNEEALKKAVASQPVSVGIEGGGRAFQFYDSGIFTGKCGTALDHGVN 299

Query: 285 VVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VVGYG + G+ YW+V+NSWG+SWGEAGYIRM RN   +++G CGI M+ SYP+K
Sbjct: 300 VVGYGTEKGKDYWIVRNSWGSSWGEAGYIRMERNLAGTSVGKCGIAMEPSYPLK 353


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/308 (48%), Positives = 195/308 (63%), Gaps = 32/308 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +  WL ++ + Y    E +RRF I+  N++++D  NS+N S+K+  N+FADL+NEE+ S 
Sbjct: 47  YAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSENRSYKVGLNRFADLTNEEYRSM 106

Query: 122 YLG--------YNKPYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +LG        + K  +  R  +VQ    LP SVDWR+ GAV P+KDQG CGSCWAFS V
Sbjct: 107 FLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESGAVAPIKDQGSCGSCWAFSTV 166

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEG+N++ TG+++ LSEQELVDCD  + + GCNGG M+ AFEFI   GG+ TE+DYPY
Sbjct: 167 AAVEGVNQIATGEMIQLSEQELVDCD-RTYDAGCNGGLMDYAFEFIINNGGIDTEEDYPY 225

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGV 270
           RG +  C  ++     V+I  YE +P                      +  AFQLY  GV
Sbjct: 226 RGVDGTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQPVSVAIEASGRAFQLYLSGV 285

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F   CG  L+HGV VVGYG D+G  +W+V+NSWGTSWGE GYIRM RN   +  G CGI 
Sbjct: 286 FTGECGRALDHGVVVVGYGTDNGADHWIVRNSWGTSWGENGYIRMERNVVDNFGGKCGIA 345

Query: 331 MQASYPVK 338
           MQASYP+K
Sbjct: 346 MQASYPIK 353


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 152/313 (48%), Positives = 201/313 (64%), Gaps = 33/313 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNE 116
           ++E FE+WL ++ + Y + DE  +RF I+  N++YID  NS +N S+KL  N+FAD++NE
Sbjct: 46  VKEMFESWLVKHGKSYNAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNE 105

Query: 117 EFISTYLGYNKPYNE-------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           E+ + YLG  +  +         R+  V    LP S+DWR++GAVT VKDQG CGSCWAF
Sbjct: 106 EYRTGYLGAKRDASRNMVKSKSDRYAPVAGDSLPDSIDWREKGAVTGVKDQGSCGSCWAF 165

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S +AAVEG+N+L TG L+SLSEQELVDCD    NQGCNGG M  AF+FI K GG+ +E+D
Sbjct: 166 STIAAVEGVNQLATGNLISLSEQELVDCD-RKINQGCNGGDMGYAFQFIIKNGGIDSEED 224

Query: 230 YPYRGKNDRCQTDKTKHHAV-TITGYEAIPAR----------------------YAFQLY 266
           YPY GK+ +C + +  +  V +I GYE +P                        Y FQLY
Sbjct: 225 YPYTGKDGKCDSYRQNNAKVASIDGYEEVPVNNEKSLQKAVANQPVSVAIEAGGYDFQLY 284

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S G+F   CG  L+HGV  VGYG ++G  YW+VKNSWG  WGE GY+RM RN   +  G+
Sbjct: 285 SSGIFTGSCGTDLDHGVAAVGYGTENGVDYWIVKNSWGDYWGEKGYVRMQRNV-KAKTGL 343

Query: 327 CGILMQASYPVKR 339
           CGI M+ASYP K+
Sbjct: 344 CGIAMEASYPTKK 356


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 195/314 (62%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFA 111
           + +   +  W+ ++   Y +  E +RRF  +  N++YID  N+       SF+L  N+FA
Sbjct: 37  EEVRRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFA 96

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSC 166
           DL+NEE+ STYLG     +  R  S +Y       LP SVDWRK+GAV  VKDQG CGSC
Sbjct: 97  DLTNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAVGAVKDQGGCGSC 156

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA+AAVEGIN++ TG ++ LSEQELVDCD  S NQGCNGG M+ AFEFI   GG+ +
Sbjct: 157 WAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT-SYNQGCNGGLMDYAFEFIINNGGIDS 215

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E+DYPY+ +++RC  +K     VTI GYE +P                         AFQ
Sbjct: 216 EEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQ 275

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LY  G+F   CG  L+HGV  VGYG ++G+ YWLV+NSWG+ WGE GYIRM RN  +S+ 
Sbjct: 276 LYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASS- 334

Query: 325 GICGILMQASYPVK 338
           G CGI ++ SYP K
Sbjct: 335 GKCGIAVEPSYPTK 348


>gi|144905108|dbj|BAF56428.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/337 (47%), Positives = 201/337 (59%), Gaps = 32/337 (9%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + SL LL V G  A    E   +  +  S++ER E W+ QY + Y    E + R  I+  
Sbjct: 9   ISSLALLLVFGFLA---FEANARTLEDVSLKERHEQWMTQYGKVYTDSYEKELRSNIFKE 65

Query: 89  NVQYID-YINSQNLSFKLTDNKFADLSNEEFIS-TYLGYNKPYNEPRWPSVQY---LGLP 143
           NVQ I+ + N+ N  +KL  N+FADL+NEEF +      +   N  R P+ +Y     +P
Sbjct: 66  NVQRIEAFNNAGNKPYKLGINQFADLTNEEFKARNRFKGHMCSNSTRTPTFKYEDVSSVP 125

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           AS+DWR++GAVTP+KDQGQCG CWAFSAVAA EGI KL TGKL+SLSEQELVDCD    +
Sbjct: 126 ASLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVD 185

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--- 260
           QGC GG M+ AF+FI +  G+ TE  YPY+G +  C  +     A +I G+E +PA    
Sbjct: 186 QGCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDATCNANAEAKDAASIKGFEDVPANSES 245

Query: 261 -------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ YS G+F   CG +L+HGVT VGYG  D G KYWLVK
Sbjct: 246 ALLKAVANQPISVAIDASGSEFQFYSSGLFTGSCGTELDHGVTAVGYGVSDDGTKYWLVK 305

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWG  WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 306 NSWGEQWGEEGYIRMQRDVAAEE-GLCGIAMQASYPT 341


>gi|357474725|ref|XP_003607647.1| Cysteine proteinase [Medicago truncatula]
 gi|355508702|gb|AES89844.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 193/311 (62%), Gaps = 28/311 (9%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFA 111
           Y+  S++ER E W+ +Y + Y    E ++RF I+  NV++I+  N+  N  +KL+ N  A
Sbjct: 31  YESPSLQERHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLA 90

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           DL+ +EF ++  GY K   E    S +Y     +P +VDWR +GAVTP+KDQGQCGSCWA
Sbjct: 91  DLTLDEFKASRNGYKKIDREFATTSFKYENVTAIPEAVDWRVKGAVTPIKDQGQCGSCWA 150

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS VAA+EGIN++ TGKL+SLSEQELVDCD   E+QGC GG ME  FEFI K GG+T+E 
Sbjct: 151 FSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSET 210

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
           +YPY+  +  C T  T   A  ITGYE +P                      +  +F  Y
Sbjct: 211 NYPYKAADGSCNTATTAPVA-KITGYEKVPVNSEISLLKAVANQPISVSIDASDSSFMFY 269

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S G++   CG +L+HGVT VGYG  +G  YW+VKNSWGT WGE GYIRM R       G+
Sbjct: 270 SSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGYIRMQRGIADKE-GL 328

Query: 327 CGILMQASYPV 337
           CGI M +SYP 
Sbjct: 329 CGIAMDSSYPT 339


>gi|10336513|dbj|BAB13759.1| cysteine proteinase [Astragalus sinicus]
          Length = 343

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/337 (47%), Positives = 204/337 (60%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL LL  LG+ A    +   +     SM ER + W+ QY++ Y    EW++RF I+  N
Sbjct: 10  ISLALLMCLGLWA---VQVTSRTLQDASMYERHQQWMGQYAKIYNDHQEWEKRFQIFKEN 66

Query: 90  VQYIDYINSQNLSF-KLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LGLP 143
           V YI+  N +   F KL  N+F DL+NEEFI+    +         R  + +Y     +P
Sbjct: 67  VNYIETSNKEGGRFYKLGVNQFVDLTNEEFIAPRNRFKGHMCSSIIRTNTYKYENVTTVP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWR++GAVTPVKDQGQCG CWAFSAVAA EGI++L TGKL+SLSEQELVDCD    +
Sbjct: 127 SNVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHQLSTGKLISLSEQELVDCDTKGVD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG M+ AF+FI +  G+ TE  YPY+G +  C  ++   +A TIT YE +P     
Sbjct: 187 QGCEGGLMDDAFKFIIQNHGLDTEAKYPYQGVDGTCNANEASINAATITSYEDVPTNNEQ 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y+ GVF   CG +L+HGVT VGYG  D G KYWLVK
Sbjct: 247 ALQKAVANQPISVAIDASGSDFQFYTSGVFTGSCGTELDHGVTAVGYGVSDDGTKYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGTSWGE GYIRM R   +   G+CGI MQASYP+
Sbjct: 307 NSWGTSWGEEGYIRMQRGVDAVE-GLCGIAMQASYPI 342


>gi|224136808|ref|XP_002326950.1| predicted protein [Populus trichocarpa]
 gi|222835265|gb|EEE73700.1| predicted protein [Populus trichocarpa]
          Length = 456

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/346 (45%), Positives = 206/346 (59%), Gaps = 37/346 (10%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQS-------MEERFENWLKQYSREYGSEDEWQR 81
           ++ LFL++ L          Y Q +  +S       +   +E WL ++ + Y +  E ++
Sbjct: 2   LMLLFLVFALSSAFDMSIISYHQTHATKSSWRTDDEVMAMYEEWLVKHGKNYNALGEKEK 61

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNK------PYNEPRWP 135
           RF I+  N+ +ID  NS+N ++ +  N+FADL+NEEF S YLG         P    R+ 
Sbjct: 62  RFEIFKDNLMFIDQHNSENRTYTVGLNRFADLTNEEFRSMYLGTRTGHKKRLPKTSDRYA 121

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
                 LP SVDWRKEGAV  VKDQG CGSCWAFS +AAVEGINK+ TG L++LSEQELV
Sbjct: 122 PRVGDSLPDSVDWRKEGAVAEVKDQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQELV 181

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCD  S N+GCNGG M+ AFEFI   GG+ TEDDYPY G++ RC T +     V+I  YE
Sbjct: 182 DCDT-SYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGRDGRCDTYRKNAKVVSIDSYE 240

Query: 256 AIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHG 293
            +P                          FQLY+ GVF   CG  L+HGV  VGYG + G
Sbjct: 241 DVPENDETALKKAVANQPVSVAIEGGGRNFQLYNSGVFTGECGTSLDHGVAAVGYGTEKG 300

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           + YW+V+NSWG SWGE+GYIRM RN  +S  G CGI ++ SYP+K+
Sbjct: 301 KDYWIVRNSWGKSWGESGYIRMERNI-ASPTGKCGIAIEPSYPIKK 345


>gi|118486542|gb|ABK95110.1| unknown [Populus trichocarpa]
          Length = 465

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/306 (49%), Positives = 192/306 (62%), Gaps = 30/306 (9%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y +  E ++RF I+  N+ +ID  NS+N ++ +  N+FADL+NEEF S 
Sbjct: 51  YEEWLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNSENRTYTVGLNRFADLTNEEFRSM 110

Query: 122 YLGYNK------PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           YLG         P    R+       LP SVDWRKEGAV  VKDQG CGSCWAFS +AAV
Sbjct: 111 YLGTRTGHKKRLPKTSDRYAPRVGDSLPDSVDWRKEGAVAEVKDQGGCGSCWAFSTIAAV 170

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGINK+ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ TEDDYPY G+
Sbjct: 171 EGINKIVTGDLIALSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGR 229

Query: 236 NDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDE 273
           + RC T +     V+I  YE +P                          FQLY+ GVF  
Sbjct: 230 DGRCDTYRKNAKVVSIDSYEDVPENDETALKKAVANQPVSVAIEGGGRNFQLYNSGVFTG 289

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            CG  L+HGV  VGYG + G+ YW+V+NSWG SWGE+GYIRM RN  +S  G CGI ++ 
Sbjct: 290 ECGTSLDHGVAAVGYGTEKGKDYWIVRNSWGKSWGESGYIRMERNI-ASPTGKCGIAIEP 348

Query: 334 SYPVKR 339
           SYP+K+
Sbjct: 349 SYPIKK 354


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 203/321 (63%), Gaps = 34/321 (10%)

Query: 49  YPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFK 104
           Y ++ D ++    +  W+  + R Y +  E +RR+ ++  N++YID  N+       SF+
Sbjct: 34  YGERSDEEA-RRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFR 92

Query: 105 LTDNKFADLSNEEFISTYLGY-NKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKD 159
           L  N+FADL+N+E+ +TYLG   +P  E     R+ +     LP SVDWR +GAV  VKD
Sbjct: 93  LGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAVAEVKD 152

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFS +AAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI 
Sbjct: 153 QGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFII 211

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TE DYPY+G + RC  ++     VTI  YE +PA                    
Sbjct: 212 NNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIE 271

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM R
Sbjct: 272 AAGTAFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMER 331

Query: 318 NSPSSNIGICGILMQASYPVK 338
           N  +S+ G CGI ++ SYP+K
Sbjct: 332 NIKASS-GKCGIAVEPSYPLK 351


>gi|535454|gb|AAA50755.1| cysteine proteinase [Alnus glutinosa]
          Length = 340

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 157/342 (45%), Positives = 200/342 (58%), Gaps = 30/342 (8%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M   +    L ++  LG  A   +    +     SM ER E W+  Y R Y   +E Q+R
Sbjct: 1   MGFVSQCFCLVVMVTLGALASQLAA--ARSLQDASMRERHEEWMASYGRVYKDINEKQKR 58

Query: 83  FGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-- 139
           + I+  NV  I+  N   N  +KL+ N+FADL+NEEF ++   +       +  S +Y  
Sbjct: 59  YKIFEENVALIESSNKDANKPYKLSVNQFADLTNEEFKASRNRFKGHICSTKSTSFKYGN 118

Query: 140 -LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              +P+++DWR +GAVTPVKDQGQCG CWAFSAVAA EGI KL TG+L+SLSEQELVDCD
Sbjct: 119 VSAVPSAMDWRMKGAVTPVKDQGQCGCCWAFSAVAATEGITKLTTGELISLSEQELVDCD 178

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
            +  +QGC GG M+ AF FI    G+ +E +YPY+G +  C T+K   HA  I G+E +P
Sbjct: 179 TSGVDQGCEGGLMDNAFTFIQHNHGLASEANYPYKGVDGTCNTNKQAIHAAEINGFEDVP 238

Query: 259 AR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEK 295
           A                         FQ YS GVF   CG QL+HGVT VGYG  D G K
Sbjct: 239 ANSEEALLNAVAHQPVSVAIDAGGSGFQFYSKGVFIGACGTQLDHGVTAVGYGTSDDGTK 298

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YWLVKNSWGT WGE GYIRM R+  +   G+CGI M+ASYP 
Sbjct: 299 YWLVKNSWGTQWGEEGYIRMQRDVDAKE-GLCGIAMKASYPT 339


>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
          Length = 343

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/337 (46%), Positives = 208/337 (61%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL L + LG+ A    +   +     S+ ER E W+  Y + Y +  E ++R  I++ N
Sbjct: 10  VSLALFFCLGLLA---IQVTSRTLQDDSIFERHEQWMTHYGKVYKNPQEREKRLRIFTEN 66

Query: 90  VQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY--LGLP 143
           ++YI+  N+      +KL  N+FADL+NEEFI++   +         R  + +Y    +P
Sbjct: 67  LKYIEASNNAGNKKPYKLGINQFADLTNEEFIASRNKFKGHMCSSIIRTTTFKYENTSVP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWRK+GAVTPVK+QGQCG CWAFSA+AA EGI+K+ TGKLVSLSEQELVDCD N  +
Sbjct: 127 STVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCDTNGVD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG M+ AF+FI +  G++TE  YPY+G +  C+ ++    A TITGYE +PA    
Sbjct: 187 QGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGTCKANEASTSAATITGYEDVPANNEN 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLVK
Sbjct: 247 ALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYIRM R+  ++  G+CGI MQASYP 
Sbjct: 307 NSWGTDWGEEGYIRMQRSIDAAE-GLCGIAMQASYPT 342


>gi|414589857|tpg|DAA40428.1| TPA: Vignain [Zea mays]
          Length = 377

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 161/336 (47%), Positives = 197/336 (58%), Gaps = 55/336 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFA 111
           + DP  M ERFE W+ ++ R Y    E QRR  +Y  NV+ ++  NS    ++L DNKFA
Sbjct: 46  RADP--MLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVELVETFNSMGNGYRLADNKFA 103

Query: 112 DLSNEEFISTYLGYNKPYN-----EPRWPSV------------QYLGLPASVDWRKEGAV 154
           DL+NEEF +  LG+ +P +         PS              Y  LP SVDWR++GAV
Sbjct: 104 DLTNEEFRAKMLGFGRPRSGGGAGHSTAPSTVACIGSGLMGRQGYSDLPKSVDWREKGAV 163

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
            PVK QG CGSCWAFSAVAA+EGIN++K GKLVSLSEQELVDCD  +   GC GGYM  A
Sbjct: 164 APVKSQGDCGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKA--IGCAGGYMSWA 221

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI----------------- 257
           FEF+ K  G+TTE +YPY+G N  CQT K K  AV+I+GY  +                 
Sbjct: 222 FEFVMKNRGLTTERNYPYQGLNGACQTPKLKESAVSISGYMNVTPSSEPDLLRAAAAQPV 281

Query: 258 -----PARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE-----------KYWLVKN 301
                   + +QLY  GVF   C  +LNHGVTVVGYGE  G+           KYW+VKN
Sbjct: 282 SVAVDAGSFVWQLYGGGVFTGPCTAELNHGVTVVGYGETQGDTDGDGSGVPGKKYWIVKN 341

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG  WG+AGYI M R + S   G+CGI M  SYPV
Sbjct: 342 SWGPEWGDAGYILMQREA-SVASGLCGIAMLPSYPV 376


>gi|226507844|ref|NP_001148894.1| LOC100282514 precursor [Zea mays]
 gi|194703250|gb|ACF85709.1| unknown [Zea mays]
 gi|195622994|gb|ACG33327.1| vignain precursor [Zea mays]
          Length = 356

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 160/336 (47%), Positives = 198/336 (58%), Gaps = 55/336 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFA 111
           + DP  M ERFE W+ ++ R Y    E QRR  +Y  NV+ ++  NS    ++L DNKFA
Sbjct: 25  RADP--MLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVELVETFNSMGNGYRLADNKFA 82

Query: 112 DLSNEEFISTYLGYNKPYN-----EPRWPSV------------QYLGLPASVDWRKEGAV 154
           DL+NEEF +  LG+ +P +         PS              Y  LP SVDWR++GAV
Sbjct: 83  DLTNEEFRAKMLGFGRPRSGGGAGHSTAPSTVACIGSGLMGRQGYSDLPKSVDWREKGAV 142

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
            PVK QG CGSCWAFSAVAA+EGIN++K GKLVSLSEQELVDCD  +   GC GGYM  A
Sbjct: 143 APVKSQGDCGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKA--IGCAGGYMSWA 200

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI----------------- 257
           FEF+ K  G+TTE +YPY+G N  CQT K K  AV+I+GY  +                 
Sbjct: 201 FEFVMKNRGLTTERNYPYQGLNGACQTPKLKESAVSISGYMNVTPSSEPDLLRAAAAQPV 260

Query: 258 -----PARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE-----------KYWLVKN 301
                   + +QLY  GVF   C  +LNHGVTVVGYGE  G+           KYW+VKN
Sbjct: 261 SVAVDAGSFVWQLYGGGVFTGPCTAELNHGVTVVGYGETQGDTDGDGSGVPGKKYWIVKN 320

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG  WG+AGYI M R +  ++ G+CGI M  SYPV
Sbjct: 321 SWGPEWGDAGYILMQREASVAS-GLCGIAMLPSYPV 355


>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 194/310 (62%), Gaps = 30/310 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSN 115
           SM ER E W+ +Y + Y    E ++RF I+  NV YI+ + N+ N  +KL  N+FADL+N
Sbjct: 581 SMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTN 640

Query: 116 EEFISTYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EEFI+    +         R  + +Y     +P++VDWR++GAVTP+KDQGQCG CWAFS
Sbjct: 641 EEFIAPRNRFKGHMCSSIIRTTTFKYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFS 700

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+ L +GKL+SLSEQELVDCD    +QGC GG M+ AF+F+ +  G+ TE +Y
Sbjct: 701 AVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANY 760

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+G + +C  ++  +  VTITGYE +PA                         FQ Y  
Sbjct: 761 PYKGVDGKCNANEAANDVVTITGYEDVPANNEKALQKAVANQPVSVAIDASGSDFQFYKS 820

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG  + G +YWLVKNSWGT WGE GYIRM R   S   G+C
Sbjct: 821 GVFTGSCGTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEE-GLC 879

Query: 328 GILMQASYPV 337
           GI MQASYP 
Sbjct: 880 GIAMQASYPT 889


>gi|2511693|emb|CAB17076.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 455

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 152/312 (48%), Positives = 195/312 (62%), Gaps = 30/312 (9%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + +   +E WL ++ + Y +  E  +RF I+  N+++ID  N++N ++KL  N+FADL+N
Sbjct: 34  EEVNSLYEEWLVKHGKLYNALGEKDKRFQIFKDNLRFIDQQNAENRTYKLGLNRFADLTN 93

Query: 116 EEFISTYLGYNKPYNEP--RWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           EE+ + YLG     N    R PS +Y       LP SVDWRKEGAV PVKDQ  CGSCWA
Sbjct: 94  EEYRARYLGTKIDPNRRLGRTPSNRYAPRVGETLPDSVDWRKEGAVVPVKDQASCGSCWA 153

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA+ AVEGINK+ TG L+SLSEQELVDCD    N GCNGG M+ AFEFI K GG+ +E+
Sbjct: 154 FSAIGAVEGINKIVTGDLISLSEQELVDCDT-GYNMGCNGGLMDYAFEFIIKNGGIDSEE 212

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAI---------------PARYA-------FQLY 266
           DYPY+G + RC   +     V+I GYE +               P   A       FQLY
Sbjct: 213 DYPYKGVDGRCDEYRKNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGGGREFQLY 272

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S GVF   CG  L+HGV  VGYG D+G  +W+V+NSWG  WGE GYIR+ RN  +S  G 
Sbjct: 273 SSGVFTGRCGTALDHGVVAVGYGTDNGHDFWIVRNSWGADWGEEGYIRLERNLGNSRSGK 332

Query: 327 CGILMQASYPVK 338
           CGI ++ SYP+K
Sbjct: 333 CGIAIEPSYPIK 344


>gi|111073715|dbj|BAF02546.1| triticain alpha [Triticum aestivum]
 gi|388890585|gb|AFK80346.1| cysteine endopeptidase EP alpha [Secale cereale x Triticum durum]
          Length = 461

 Score =  290 bits (743), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 149/314 (47%), Positives = 197/314 (62%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFA 111
           + +   +  W+ ++ R Y +  E +RRF ++  N++YID  N+       SF+L  N+FA
Sbjct: 35  EEVRRMYAEWMSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAGLHSFRLGLNRFA 94

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSC 166
           DL+NEE+ STYLG     +  R  S +Y       LP +VDWRK+GAV  +KDQG CGSC
Sbjct: 95  DLTNEEYRSTYLGARTKPDRERKLSARYQADDNEELPETVDWRKKGAVAAIKDQGGCGSC 154

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA+AAVEGIN++ TG ++ LSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +
Sbjct: 155 WAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDS 213

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E+DYPY+ +++RC  +K     VTI GYE +P                         AFQ
Sbjct: 214 EEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQ 273

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LY  G+F   CG  L+HGV  VGYG ++G+ YWLV+NSWGT WGE GYIRM RN  +S+ 
Sbjct: 274 LYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGTVWGEDGYIRMERNIKASS- 332

Query: 325 GICGILMQASYPVK 338
           G CGI ++ SYP K
Sbjct: 333 GKCGIAVEPSYPTK 346


>gi|144905104|dbj|BAF56427.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  290 bits (743), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 160/336 (47%), Positives = 203/336 (60%), Gaps = 32/336 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +S  L+  LG+ A   S    Q     SM ER E W+ +Y + Y    E ++RF I+  N
Sbjct: 10  ISFALVLCLGLWAFQVSSRTLQD---ASMHERHEQWMARYGKVYKDLQEKEKRFNIFQEN 66

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY--LGLPA 144
           V+YI+  N+  N  +KL  N+F DL+N+EFI+T   +    +    R  + +Y  +  P+
Sbjct: 67  VKYIEASNNAGNKPYKLGVNQFTDLTNKEFIATRNKFKGHMSSSITRTTTFKYENVTAPS 126

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWR+EGAVTPVK+QG CG CWAFSAVAA EGI+KL TG LVSLSEQELVDCD +  +Q
Sbjct: 127 TVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQELVDCDTSGADQ 186

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA-- 262
           GC GG M+ AF+FI + GG+ TE  YPY+G +  C T++   H  TITGYE +P+     
Sbjct: 187 GCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGTCNTNEEVTHVATITGYEDVPSNNEQA 246

Query: 263 --------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ Y  GVF   CG QL+HGV VVGYG  D G KYWLVKN
Sbjct: 247 LQQAVANQPISVAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVVGYGVSDDGTKYWLVKN 306

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG  WGE GYIRM R+  +   G+CGI MQ SYP 
Sbjct: 307 SWGEDWGEEGYIRMQRDVEAPE-GLCGIAMQPSYPT 341


>gi|224056176|ref|XP_002298740.1| predicted protein [Populus trichocarpa]
 gi|222845998|gb|EEE83545.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  290 bits (742), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 194/310 (62%), Gaps = 34/310 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           +E WL ++ R Y +  E +RRF I+  N+++ID  NS  N S+KL  NKFADLSN+E+ S
Sbjct: 25  YEMWLVKHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYRS 84

Query: 121 TYLG---------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            YLG            P +E R+   +   LP +VDWR++GAV PVKDQGQCGSCWAFS 
Sbjct: 85  VYLGTRMDGKGRLLGGPKSE-RYLFKEGDDLPETVDWREKGAVAPVKDQGQCGSCWAFST 143

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           V AVEGIN++ TG L SLSEQELVDCD  + N GCNGG M+ AF+FI + GG+ TE+DYP
Sbjct: 144 VGAVEGINQIVTGNLTSLSEQELVDCD-KTYNLGCNGGLMDYAFDFIIENGGIDTEEDYP 202

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y+  +  C  ++     VTI GYE +P                          FQLY  G
Sbjct: 203 YKAIDSMCDPNRKNARVVTIDGYEDVPQNDEKSLKKAVANQPVSVAIEAGGRGFQLYQSG 262

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           VF   CG QL+HGV  VGYG +HG  YW+V+NSWG +WGE GYIRM R+  S+  G CGI
Sbjct: 263 VFTGSCGTQLDHGVVTVGYGTEHGVDYWIVRNSWGPAWGENGYIRMERDVASTETGKCGI 322

Query: 330 LMQASYPVKR 339
            M+ASYP K+
Sbjct: 323 AMEASYPTKK 332


>gi|319826926|gb|ADV74756.1| cysteine protease [Lactuca sativa]
          Length = 363

 Score =  290 bits (742), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/317 (50%), Positives = 195/317 (61%), Gaps = 38/317 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           DP +M  R E W+  + R Y  E+E Q RF I+ +NV YID  N++ + S+ L  NKFAD
Sbjct: 48  DP-TMIARHEQWMAHHGRIYTDENEKQLRFQIFKNNVAYIDAHNARSDQSYTLEVNKFAD 106

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLGL---------PASVDWRKEGAVTPVKDQGQC 163
           L+N+EF ++  GY K   +P   S    GL         P  VDWRKEGAVTPVKDQG C
Sbjct: 107 LTNDEFRASRNGYKK---QPDSDSHVVSGLFRYANVSAVPDEVDWRKEGAVTPVKDQGDC 163

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           G CWAFSAVAA+EGINKL+ GKLVSLSEQELVDCD++  +QGC GG ME AF+FI K  G
Sbjct: 164 GCCWAFSAVAAMEGINKLENGKLVSLSEQELVDCDIDGIDQGCEGGLMENAFQFIEKRKG 223

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           +  E  YPY G++  C T K    A  I+G+E +PA                       Y
Sbjct: 224 LAAESVYPYTGEDGICNTKKAAIPAAKISGHEKVPANNEKALLQAVANQPVSIAIDASGY 283

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            FQ YS GVF   CG +L+H +T VGYG    G KYWL+KNSWG SWGE GYIR+ R+S 
Sbjct: 284 EFQFYSGGVFTGSCGTELDHAITAVGYGATMDGTKYWLMKNSWGASWGENGYIRIKRDSL 343

Query: 321 SSNIGICGILMQASYPV 337
           +   G+CGI M  SYPV
Sbjct: 344 AKE-GLCGIAMDPSYPV 359


>gi|388512155|gb|AFK44139.1| unknown [Medicago truncatula]
          Length = 340

 Score =  290 bits (742), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 192/311 (61%), Gaps = 28/311 (9%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFA 111
           Y+  S++ER E W+ +Y + Y    E ++RF I+  NV++I+  N+  N  +KL+ N  A
Sbjct: 31  YESPSLQERHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLA 90

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           DL+ +EF ++  GY K   E    S +Y     +P +VDWR +GAVTP+KDQGQCGSCWA
Sbjct: 91  DLTLDEFKASRNGYKKIDREFATTSFKYENVTAIPEAVDWRVKGAVTPIKDQGQCGSCWA 150

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS VAA+EGIN++ TGKL+SLSEQELVDCD   E+QGC GG ME  FEFI K GG+T+E 
Sbjct: 151 FSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSET 210

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
           +YPY+  +  C    T   A  ITGYE +P                      +  +F  Y
Sbjct: 211 NYPYKAADGSCSAATTAPVA-KITGYEKVPVNSEISLLKAVANQPISVSIDASDSSFMFY 269

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S G++   CG +L+HGVT VGYG  +G  YW+VKNSWGT WGE GYIRM R       G+
Sbjct: 270 SSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGYIRMQRGIADKE-GL 328

Query: 327 CGILMQASYPV 337
           CGI M +SYP 
Sbjct: 329 CGIAMDSSYPT 339


>gi|356545063|ref|XP_003540965.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 361

 Score =  290 bits (742), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 194/310 (62%), Gaps = 30/310 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSN 115
           SM ER E W+ +Y + Y    E ++RF I+  NV YI+ + N+ N  +KL  N+FADL+N
Sbjct: 52  SMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTN 111

Query: 116 EEFISTYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EEFI+    +         R  + +Y     +P++VDWR++GAVTP+KDQGQCG CWAFS
Sbjct: 112 EEFIAPRNRFKGHMCSSIIRTTTFKYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFS 171

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+ L +GKL+SLSEQELVDCD    +QGC GG M+ AF+F+ +  G+ TE +Y
Sbjct: 172 AVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANY 231

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+G + +C  ++  +  VTITGYE +PA                         FQ Y  
Sbjct: 232 PYKGVDGKCNANEAANDVVTITGYEDVPANNEKALQKAVANQPVSVAIDASGSDFQFYKS 291

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG  + G +YWLVKNSWGT WGE GYIRM R   S   G+C
Sbjct: 292 GVFTGSCGTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEE-GLC 350

Query: 328 GILMQASYPV 337
           GI MQASYP 
Sbjct: 351 GIAMQASYPT 360


>gi|24285904|gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas]
 gi|56961686|gb|AAK15148.2| cysteine proteinase-like protein [Ipomoea batatas]
          Length = 341

 Score =  290 bits (741), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 195/308 (63%), Gaps = 32/308 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNE 116
           M  R E W+ QY R Y +E E  +RF I+  NV+YI+  N      +KL  N FADL+N+
Sbjct: 35  MVVRHEQWMAQYGRVYENEVEKTKRFNIFKENVEYIESFNKAGTKPYKLGINAFADLTNQ 94

Query: 117 EFISTYLGYNKPY----NEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           EF ++  GY  P+    N P R+ +V    +P +VDWR +GAVTPVKDQGQCG CWAFSA
Sbjct: 95  EFKASRNGYKLPHDCSSNTPFRYENVS--SVPTTVDWRTKGAVTPVKDQGQCGCCWAFSA 152

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VAA+EGI KL TG L+SLSEQELVDCDV   +QGC GG M+ AF FI    G+TTE +YP
Sbjct: 153 VAAMEGITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFSFIINNKGLTTESNYP 212

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHG 269
           Y+G +  C+  K+ + A  I+GYE +PA                         FQ YS G
Sbjct: 213 YQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSDFQFYSSG 272

Query: 270 VFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG +L+HGVT VGYG  + G KYWLVKNSWGTSWGE GYIRM ++  +   G+CG
Sbjct: 273 VFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEAKE-GLCG 331

Query: 329 ILMQASYP 336
           I MQ+SYP
Sbjct: 332 IAMQSSYP 339


>gi|356577811|ref|XP_003557016.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 194/310 (62%), Gaps = 30/310 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSN 115
           SM ER E W+ +Y + Y    E ++RF I+  NV YI+ + N+ N  +KL  N+FADL+N
Sbjct: 34  SMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTN 93

Query: 116 EEFISTYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EEFI+    +         R  + +Y     +P++VDWR++GAVTP+KDQGQCG CWAFS
Sbjct: 94  EEFIAPRNRFKGHMCSSIIRTTTFKYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFS 153

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+ L +GKL+SLSEQELVDCD    +QGC GG M+ AF+F+ +  G+ TE +Y
Sbjct: 154 AVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+G + +C  ++  + A TITGYE +PA                         FQ Y  
Sbjct: 214 PYKGVDGKCNVNEAANDAATITGYEDVPANNEKALQKAVANQPVSVAIDASGSDFQFYKS 273

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG  + G +YWLVKNSWGT WGE GYIRM R   S   G+C
Sbjct: 274 GVFTGSCGTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQRGVNSEE-GLC 332

Query: 328 GILMQASYPV 337
           GI MQASYP 
Sbjct: 333 GIAMQASYPT 342


>gi|357437715|ref|XP_003589133.1| Cysteine proteinase [Medicago truncatula]
 gi|87240770|gb|ABD32628.1| Granulin; Peptidase C1A, papain [Medicago truncatula]
 gi|355478181|gb|AES59384.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/354 (43%), Positives = 206/354 (58%), Gaps = 37/354 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER----FENWLKQYSREYGSE 76
           M++M+   + S  +   L +   ++ + +P K   +   +     +E WL ++ + Y   
Sbjct: 10  MKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLVKHGKSYNGL 69

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP---- 132
            E  +RF I+  N+++ID  N  N +++L   +FADL+NEE+ S +LG     N      
Sbjct: 70  GEKDKRFEIFKDNLKFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKL 129

Query: 133 ------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
                 R+       LP SVDWRKEGAV  VKDQ  CGSCWAFSA+AAVEGINK+ TG L
Sbjct: 130 GGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDL 189

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
           +SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +EDDYPY+  + RC  ++   
Sbjct: 190 ISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNA 248

Query: 247 HAVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVT 284
             VTI  YE +PA                         FQLY +GVF   CG  L+HGV 
Sbjct: 249 KVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVA 308

Query: 285 VVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            VGYG ++G+ YW+V+NSWG SWGE GYIR+ RN  SS  G CGI ++ SYP+K
Sbjct: 309 AVGYGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRAGKCGIAIEPSYPIK 362


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/321 (46%), Positives = 203/321 (63%), Gaps = 34/321 (10%)

Query: 49  YPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFK 104
           Y ++ D ++    +  W+  + R Y +    +RR+ ++  N++YID  N+       SF+
Sbjct: 32  YGERTDEEA-RRMYAEWMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAGVHSFR 90

Query: 105 LTDNKFADLSNEEFISTYLG-YNKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKD 159
           L  N+FADL+N+E+ +TYLG   +P  +     R+ +     LP SVDWR +GAV  VKD
Sbjct: 91  LGLNRFADLTNDEYPATYLGARTRPQRDRKLGARYHAADNEDLPESVDWRAKGAVAEVKD 150

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CG+CWAFS +AAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI 
Sbjct: 151 QGSCGTCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFII 209

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TE DYPY+G + RC  ++     VTI  YE +PA                    
Sbjct: 210 NNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIE 269

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG +L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM R
Sbjct: 270 AAGTAFQLYSSGIFTGSCGTRLDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMER 329

Query: 318 NSPSSNIGICGILMQASYPVK 338
           N  +S+ G CGI ++ SYP+K
Sbjct: 330 NIKASS-GKCGIAVEPSYPLK 349


>gi|357437719|ref|XP_003589135.1| Cysteine proteinase [Medicago truncatula]
 gi|355478183|gb|AES59386.1| Cysteine proteinase [Medicago truncatula]
          Length = 457

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/354 (43%), Positives = 206/354 (58%), Gaps = 37/354 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER----FENWLKQYSREYGSE 76
           M++M+   + S  +   L +   ++ + +P K   +   +     +E WL ++ + Y   
Sbjct: 10  MKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLVKHGKSYNGL 69

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP---- 132
            E  +RF I+  N+++ID  N  N +++L   +FADL+NEE+ S +LG     N      
Sbjct: 70  GEKDKRFEIFKDNLKFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKL 129

Query: 133 ------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
                 R+       LP SVDWRKEGAV  VKDQ  CGSCWAFSA+AAVEGINK+ TG L
Sbjct: 130 GGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDL 189

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
           +SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +EDDYPY+  + RC  ++   
Sbjct: 190 ISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNA 248

Query: 247 HAVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVT 284
             VTI  YE +PA                         FQLY +GVF   CG  L+HGV 
Sbjct: 249 KVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVA 308

Query: 285 VVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            VGYG ++G+ YW+V+NSWG SWGE GYIR+ RN  SS  G CGI ++ SYP+K
Sbjct: 309 AVGYGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRAGKCGIAIEPSYPIK 362


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 204/322 (63%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIE 265

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 266 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 325

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 326 NIKASS-GKCGIAVEPSYPLKK 346


>gi|116309178|emb|CAH66275.1| OSIGBa0147O06.5 [Oryza sativa Indica Group]
          Length = 339

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 192/313 (61%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +NV +I+  N+ N  F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADL 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF ST        +  R P+      V    LPA++DWR +G VTP+KDQGQCG CW
Sbjct: 89  TNDEFRSTKTNKGFIPSTTRVPTGFRYENVNIDALPATMDWRTKGVVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+C++    +   +I GYE +PA                         FQ 
Sbjct: 209 SNYPYAAADDKCKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE G++RM ++  S   
Sbjct: 267 YKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLRMEKD-ISDKR 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 204/322 (63%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIE 265

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 266 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 325

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 326 NIKASS-GKCGIAVEPSYPLKK 346


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 204/322 (63%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 29  YGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 88

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 89  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 147

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 148 QGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 206

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 207 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIE 266

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 267 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 326

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 327 NIKASS-GKCGIAVEPSYPLKK 347


>gi|356545118|ref|XP_003540992.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 337

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 199/335 (59%), Gaps = 34/335 (10%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
            ++LFLL  LGIP     +   +K    SM ER E W+ +Y + Y    E ++RF I+  
Sbjct: 10  TIALFLLLALGIP-----QMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKH 64

Query: 89  NVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--QYLGLPAS 145
           NV++I+  N+  N  +KL  N  ADL+ EEF ++  G  +PY     P        +PA+
Sbjct: 65  NVEFIESFNAAANKPYKLGVNHLADLTVEEFKASRNGLKRPYELSTTPFKYENVTAIPAA 124

Query: 146 VDWRKEGAVTPVKDQGQC-GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +DWR +GAVT +KDQGQC GSCWAFS VAA EGI+++ TGKLVSLSEQELVDCD    +Q
Sbjct: 125 IDWRTKGAVTSIKDQGQCAGSCWAFSTVAATEGIHQITTGKLVSLSEQELVDCDTKGVDQ 184

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY--- 261
           GC GGYME  FEFI K GG+T+E +YPY+  + +C  +K       I GYE +P      
Sbjct: 185 GCEGGYMEDGFEFIIKNGGITSEANYPYKAVDGKC--NKATSPVAQIKGYEKVPPNSEKT 242

Query: 262 -------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNS 302
                               F  YS G+++  CG +L+HGVT VGYG  +G  YWLVKNS
Sbjct: 243 LQKAVANQPVSVSIDANGEGFMFYSSGIYNGECGTELDHGVTAVGYGIANGTDYWLVKNS 302

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           WGT WGE GY+RM R   + + G+CGI + +SYP 
Sbjct: 303 WGTQWGEKGYVRMQRGVAAKH-GLCGIALDSSYPT 336


>gi|224076972|ref|XP_002305074.1| predicted protein [Populus trichocarpa]
 gi|224106329|ref|XP_002333698.1| predicted protein [Populus trichocarpa]
 gi|222837984|gb|EEE76349.1| predicted protein [Populus trichocarpa]
 gi|222848038|gb|EEE85585.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 193/307 (62%), Gaps = 28/307 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNE 116
           M +R E W+ Q+ R YG   E ++R+ I+  N++ I+ + N  +  +KL  NKFADL+NE
Sbjct: 1   MLKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNE 60

Query: 117 EFISTYLGYNKPYNEPRWPSVQYLGL---PASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EF + + GY +  ++    S ++  L   P S+DWRK GAVTPVKDQG CG CWAFSAVA
Sbjct: 61  EFRAMHHGYKRQSSKLMSSSFRHENLSAIPTSMDWRKAGAVTPVKDQGTCGCCWAFSAVA 120

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EGI KLKTGKL+SLSEQ+LVDCDV   +QGC GG M+ AF+FI + GG+T+E  YPY+
Sbjct: 121 AIEGIIKLKTGKLISLSEQQLVDCDVKGVDQGCGGGLMDNAFQFILRNGGLTSEATYPYQ 180

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
           G +  C++ KT      ITGYE +P                        Y FQ Y  GVF
Sbjct: 181 GVDGTCKSKKTASIEAKITGYEDVPVNNENALLQAVAKQPVSVAVEGGGYDFQFYKSGVF 240

Query: 272 DEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
              CG  L+H VT +GYG +  G  YWLVKNSWGTSWGE+GY+RM R   +   G+CG+ 
Sbjct: 241 KGDCGTYLDHAVTAIGYGTNSDGTNYWLVKNSWGTSWGESGYMRMQRGIGARE-GLCGVA 299

Query: 331 MQASYPV 337
           M ASYP 
Sbjct: 300 MDASYPT 306


>gi|38345008|emb|CAD40026.2| OSJNBa0052O21.11 [Oryza sativa Japonica Group]
 gi|125589414|gb|EAZ29764.1| hypothetical protein OsJ_13822 [Oryza sativa Japonica Group]
          Length = 339

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 196/313 (62%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +NV +I+  N+ N +F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWLGVNQFADL 88

Query: 114 SNEEF--ISTYLGY----NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF  + T  G+     +     R+ +V    LPA+VDWR +GAVTP+KDQGQCG CW
Sbjct: 89  TNDEFRWMKTNKGFIPSTTRVPTGFRYENVNIDALPATVDWRTKGAVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+C++    +   +I GYE +PA                         FQ 
Sbjct: 209 SNYPYAAADDKCKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE G++RM ++  S   
Sbjct: 267 YKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLRMEKD-ISDKR 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|334185815|ref|NP_680113.3| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75313879|sp|Q9STL4.1|CEP2_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP2; Flags:
           Precursor
 gi|4678354|emb|CAB41164.1| cysteine endopeptidase-like protein [Arabidopsis thaliana]
 gi|332644882|gb|AEE78403.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 159/344 (46%), Positives = 203/344 (59%), Gaps = 38/344 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKY--DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           L L  L+ L I   A    Y  K     + +   ++ W   +S    S +E ++RF ++ 
Sbjct: 4   LLLIFLFSLVILQTACGFDYDDKEIESEEGLSTLYDRWRSHHSVPR-SLNEREKRFNVFR 62

Query: 88  SNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE----PRWPSVQYL--- 140
            NV ++   N +N S+KL  NKFADL+  EF + Y G N  ++     P+  S Q++   
Sbjct: 63  HNVMHVHNTNKKNRSYKLKLNKFADLTINEFKNAYTGSNIKHHRMLQGPKRGSKQFMYDH 122

Query: 141 ----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                LP+SVDWRK+GAVT +K+QG+CGSCWAFS VAAVEGINK+KT KLVSLSEQELVD
Sbjct: 123 ENLSKLPSSVDWRKKGAVTEIKNQGKCGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVD 182

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD   +N+GCNGG ME AFEFI K GG+TTED YPY G + +C   K     VTI G+E 
Sbjct: 183 CDT-KQNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGIDGKCDASKDNGVLVTIDGHED 241

Query: 257 IP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +P                          FQ YS GVF   CG +LNHGV  VGYG + G+
Sbjct: 242 VPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTGSCGTELNHGVAAVGYGSERGK 301

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KYW+V+NSWG  WGE GYI++ R       G CGI M+ASYP+K
Sbjct: 302 KYWIVRNSWGAEWGEGGYIKIEREIDEPE-GRCGIAMEASYPIK 344


>gi|357166359|ref|XP_003580684.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 456

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 203/321 (63%), Gaps = 36/321 (11%)

Query: 53  YDPQSMEE---RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+ +  R Y +  E +RRF ++  N++Y+D  N+       SF+L
Sbjct: 30  YGERSEEEVRRMYVEWMAENGRTYNAIGEEERRFEVFRDNLRYVDQHNAAADAGLHSFRL 89

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPR----WPSVQYLGLPASVDWRKEGAVTPVKDQ 160
             N+FADL+NEE+  TYLG   KP  E R    + +     LP SVDWR++GAV  VKDQ
Sbjct: 90  GLNRFADLTNEEYRDTYLGVRTKPVRERRLSGRYQAADNEELPESVDWREKGAVAKVKDQ 149

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFSA+AAVEGIN++ TG +++LSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 150 GGCGSCWAFSAIAAVEGINQIVTGDMIALSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 208

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ +E+DYPY+ +++RC  +K     VTI GYE +P                      
Sbjct: 209 NGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSELSLKKAVANQPISVAIEA 268

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLY  G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWGT WGE GY+R+ RN
Sbjct: 269 GGRAFQLYKSGIFTGRCGTALDHGVTAVGYGSENGKDYWIVKNSWGTVWGEDGYVRLERN 328

Query: 319 SPSSNIGICGILMQASYPVKR 339
             +++ G CGI ++ SYP+K+
Sbjct: 329 IKATS-GKCGIAIEPSYPLKK 348


>gi|116309130|emb|CAH66233.1| H0825G02.10 [Oryza sativa Indica Group]
          Length = 339

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 195/316 (61%), Gaps = 32/316 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           ++ D  +M  R E W++QY R Y    E  RRF I+ +NV +I+  N+ N  F L+ N+F
Sbjct: 26  EQSDHAAMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKFWLSVNQF 85

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           ADL+N EF +T        +  R P+      V    LPA+VDWR +GAVTP+KDQGQCG
Sbjct: 86  ADLTNYEFRATKTNKGFIPSTVRVPTTFRYENVSIDTLPATVDWRTKGAVTPIKDQGQCG 145

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+
Sbjct: 146 CCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGL 205

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPY   + +C  +   + A TI GYE +PA                         
Sbjct: 206 TTESKYPYTAADGKC--NGGSNSAATIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMT 263

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GV    CG  L+HG+  +GYG+D  G +YWL+KNSWGT+WGE G++RM ++  S
Sbjct: 264 FQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD-IS 322

Query: 322 SNIGICGILMQASYPV 337
              G+CG+ M+ SYP 
Sbjct: 323 DKRGMCGLAMEPSYPT 338


>gi|356543124|ref|XP_003540013.1| PREDICTED: vignain-like [Glycine max]
 gi|356543126|ref|XP_003540014.1| PREDICTED: vignain-like [Glycine max]
          Length = 337

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/338 (45%), Positives = 200/338 (59%), Gaps = 34/338 (10%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           +  +L+L LL  +       S+   +     SM ER E W+K+Y + Y    E Q+R  I
Sbjct: 7   KQHILALVLLLSI-----CTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRLLI 61

Query: 86  YSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--QYLGL 142
           +  NV++I+  N+  N  +KL+ N  AD +NEEF++++ GY    +  + P       G+
Sbjct: 62  FKDNVEFIESFNAAGNRPYKLSINHLADQTNEEFVASHNGYKHKGSHSQTPFKYENVTGV 121

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P +VDWR+ GAVT VKDQGQCGSCWAFS VAA EGI ++ T  L+SLSEQELVDCD  S 
Sbjct: 122 PNAVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQITTSMLMSLSEQELVDCD--SV 179

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-- 260
           + GC+GGYME  FEFI K GG+++E +YPY   +  C  +K    A  I GYE +PA   
Sbjct: 180 DHGCDGGYMEGGFEFIIKNGGISSEANYPYTAVDGTCDANKEASPAAQIKGYETVPANSE 239

Query: 261 --------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLV 299
                                AFQ YS GVF   CG QL+HGVT VGYG  D G +YW+V
Sbjct: 240 DALQKAVANQPVSVTIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIV 299

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GYIRM R + +   G+CGI M ASYP 
Sbjct: 300 KNSWGTQWGEEGYIRMQRGTDAQE-GLCGIAMDASYPT 336


>gi|357474573|ref|XP_003607571.1| Cysteine proteinase EP-B [Medicago truncatula]
 gi|34329348|gb|AAQ63885.1| putative cysteine proteinase [Medicago truncatula]
 gi|355508626|gb|AES89768.1| Cysteine proteinase EP-B [Medicago truncatula]
          Length = 345

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/337 (46%), Positives = 201/337 (59%), Gaps = 32/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL L + LG+ A   +    Q  D   + E+ E W+  Y + Y    E + R  I+  N
Sbjct: 11  ISLALFFCLGLFAIQVTSRTLQ--DDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKEN 68

Query: 90  VQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYLGYN----KPYNEPRWPSVQYLGLP 143
           V YI+  N+   N  +KL  N+FADL+NEEFI++   +         +      +   +P
Sbjct: 69  VNYIEASNNAGNNKLYKLGINQFADLTNEEFIASRNKFKGHMCSSITKTSTFKYENASVP 128

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWRK+GAVTPVK+QGQCG CWAFSAVAA EGI+KL TGKLVSLSEQELVDCD    +
Sbjct: 129 STVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVD 188

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG M+ AF+FI +  G+ TE  YPY+G +  C  +K   HAVTITGYE +PA    
Sbjct: 189 QGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCSANKASIHAVTITGYEDVPANNEQ 248

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG  + G KYWLVK
Sbjct: 249 ALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVK 308

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYI+M R   ++  G+CGI M+ASYP 
Sbjct: 309 NSWGTDWGEEGYIKMQRGVDAAE-GLCGIAMEASYPT 344


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/331 (46%), Positives = 206/331 (62%), Gaps = 34/331 (10%)

Query: 38  LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN 97
           LGIP    S+ + Q+ D + +   +E+WL  + + Y +  E +RRF I+  N+++ID  N
Sbjct: 40  LGIPEIPHSDAH-QRPD-EEVAALYESWLVHHGKAYNAIGEKERRFEIFKDNLRFIDEHN 97

Query: 98  SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ------YLG--LPASVDWR 149
            ++ ++K+   +FADL+NEE+ + +LG  +   +PR  + +       LG  LP  VDWR
Sbjct: 98  RESRTYKVGLTRFADLTNEEYRARFLG-GRFSRKPRLSAAKSGRYAAALGDDLPDDVDWR 156

Query: 150 KEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGG 209
           K+GAV  VKDQGQCGSCWAFS+VAAVEGIN++ TG+L+ LSEQELVDCD  S N GCNGG
Sbjct: 157 KKGAVATVKDQGQCGSCWAFSSVAAVEGINQIVTGELIPLSEQELVDCD-KSFNMGCNGG 215

Query: 210 YMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------- 260
            M+ AF+FI   GG+ TE+DYPY+G++  C  ++     VTI GYE +P           
Sbjct: 216 LMDYAFQFIIGNGGIDTEEDYPYKGRDAACDPNRKNAKVVTIDGYEDVPENDESSLKKAV 275

Query: 261 -------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSW 307
                         AFQLY  GVF   CG  L+HGV  VGYG D+G  YW+V+NSWG  W
Sbjct: 276 ANQPVSVAIEAGGRAFQLYQSGVFTGRCGTDLDHGVVAVGYGTDNGTDYWIVRNSWGKDW 335

Query: 308 GEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GE+GYIR+ RN  +   G CGI +Q SYP K
Sbjct: 336 GESGYIRLERNVANITTGKCGIAVQPSYPTK 366


>gi|194352754|emb|CAQ00105.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326513690|dbj|BAJ87864.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514532|dbj|BAJ96253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 154/320 (48%), Positives = 198/320 (61%), Gaps = 36/320 (11%)

Query: 53  YDPQSMEE---RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+ ++   Y +  E +RRF  +  N++YID  N+       SF+L
Sbjct: 31  YGERSEEEVRRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRL 90

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQ 160
             N+FADL+NEE+ STYLG     +  R  S +Y       LP SVDWRK+GAV  VKDQ
Sbjct: 91  GLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAVGAVKDQ 150

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFSA+AAVEGIN++ TG ++ LSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 151 GGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 209

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ +E+DYPY+ +++RC  +K     VTI GYE +P                      
Sbjct: 210 NGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEA 269

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              AFQLY  G+F   CG  L+HGV  VGYG ++G+ YWLV+NSWG+ WGE GYIRM RN
Sbjct: 270 GGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERN 329

Query: 319 SPSSNIGICGILMQASYPVK 338
             +S+ G CGI ++ SYP K
Sbjct: 330 IKASS-GKCGIAVEPSYPTK 348


>gi|125547236|gb|EAY93058.1| hypothetical protein OsI_14861 [Oryza sativa Indica Group]
          Length = 339

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 194/313 (61%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +NV +I+  N+ N +F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWLGVNQFADL 88

Query: 114 SNEEF--ISTYLGYNKPYNEP----RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF    T  G+           R+ +V    LPA+VDWR +GAVTP+KDQGQCG CW
Sbjct: 89  TNDEFRWTKTNKGFIPSTTRVPTGFRYENVNIDALPATVDWRTKGAVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+C++    +   +I GYE +PA                         FQ 
Sbjct: 209 SNYPYAAADDKCKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE G++RM ++  S   
Sbjct: 267 YKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLRMEKD-ISDKR 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|297816028|ref|XP_002875897.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321735|gb|EFH52156.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 160/344 (46%), Positives = 204/344 (59%), Gaps = 38/344 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKY--DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           L L  L+ L I   A    Y  K     + + + ++ W   +S    S  E ++RF ++ 
Sbjct: 4   LLLIFLFSLVILETACGFDYEDKEIESEEGLSKLYDRWRSHHSVPR-SLHEREKRFNVFR 62

Query: 88  SNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG----YNKPYNEPRWPSVQYL--- 140
            NV ++   N +N S+KL  NKFADL+  EF + Y G    +++    P+  S Q++   
Sbjct: 63  HNVMHVHNSNKKNRSYKLKLNKFADLTIHEFKNAYTGSKIKHHRMLQGPKRGSKQFMYDH 122

Query: 141 ----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                LP+SVDWRK+GAVT +K+QG+CGSCWAFS VAAVEGINK+KT KLVSLSEQELVD
Sbjct: 123 ENVSKLPSSVDWRKKGAVTEIKNQGKCGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVD 182

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD N +N+GCNGG ME AFEFI K GG+TTED YPY G + +C   K     VTI G+E 
Sbjct: 183 CDTN-QNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGIDGKCDASKDNGVLVTIDGHEN 241

Query: 257 IP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +P                          FQ YS GVF   CG +LNHGV  VGYG   G+
Sbjct: 242 VPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTGDCGTELNHGVATVGYGSQGGK 301

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KYW+V+NSWGT WGE GYI++ R       G CGI M+ASYP+K
Sbjct: 302 KYWIVRNSWGTEWGEGGYIKIERGIDEPE-GRCGIAMEASYPIK 344


>gi|125533982|gb|EAY80530.1| hypothetical protein OsI_35710 [Oryza sativa Indica Group]
          Length = 378

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 157/327 (48%), Positives = 196/327 (59%), Gaps = 45/327 (13%)

Query: 56  QSMEERFENWLKQY-------SREYGSED-EWQRRFGIYSSNVQYIDYINSQN-LSFKLT 106
           +S+   +E W  +Y       S   G++D E +RRF ++  N +YI   N +    F+L 
Sbjct: 36  ESLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLA 95

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEP-------RWPSVQYLG-----LPASVDWRKEGAV 154
            NKFAD++ +EF  TY G    ++            S +Y G     LP +VDWR+ GAV
Sbjct: 96  LNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAV 155

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
           T +KDQGQCGSCWAFSAVAAVEG+NK+KTG+LV+LSEQELVDCD   +NQGC+GG M+ A
Sbjct: 156 TGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDT-GDNQGCDGGLMDYA 214

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------- 260
           F+FI + GG+TTE +YPYR +  RC   K   H VTI GYE +PA               
Sbjct: 215 FQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPV 274

Query: 261 --------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAG 311
                     FQ YS GVF   CG  L+HGV  VGYG    G KYW+VKNSWG  WGE G
Sbjct: 275 AVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERG 334

Query: 312 YIRMARNSPSSNIGICGILMQASYPVK 338
           YIRM R   S + G+CGI M+ASYPVK
Sbjct: 335 YIRMQRGVSSDSNGLCGIAMEASYPVK 361


>gi|46401612|dbj|BAD16614.1| cysteine proteinase [Dianthus caryophyllus]
          Length = 459

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 153/315 (48%), Positives = 194/315 (61%), Gaps = 47/315 (14%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y    E Q RF I+  N++++D  NS+NLSFKL  N+FADL+NEE+ S 
Sbjct: 43  YETWLVKHGKNYNGLGEKQLRFNIFKDNLRFVDERNSENLSFKLGLNRFADLTNEEYRSV 102

Query: 122 YLGYNKPYNEPRWPSVQYLG--------------LPASVDWRKEGAVTPVKDQGQCGSCW 167
           YLG       PR  +V   G              LP SVDWRK+GAV  +KDQG CGSCW
Sbjct: 103 YLG-----TRPRSVAVARSGRSKSDRYAFRAGDTLPESVDWRKKGAVAGIKDQGSCGSCW 157

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA+AAVEG+N++ TG L+SLSEQELV+CD  S N GC+GG M+ AFEFI K  G+ ++
Sbjct: 158 AFSAIAAVEGVNQIVTGDLISLSEQELVECDT-SYNDGCDGGLMDYAFEFIIKNEGIDSD 216

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQL 265
           +DYPY G++ RC T++     VTI  YE  P                          FQL
Sbjct: 217 EDYPYTGRDGRCDTNRKNAKVVTIDDYEDSPVYDEKSLQKAVANQPVSVAIEGGGRDFQL 276

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS--PSSN 323
           Y  GVF   CG  L+HGV VVGYG + G  YW+V+NSWG +WGE GYIRM RN+  PS  
Sbjct: 277 YDSGVFTGKCGTALDHGVAVVGYGTEDGLDYWIVRNSWGDTWGEGGYIRMQRNTKLPS-- 334

Query: 324 IGICGILMQASYPVK 338
            GICGI ++ SYP+K
Sbjct: 335 -GICGIAIEPSYPIK 348


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 154/347 (44%), Positives = 200/347 (57%), Gaps = 37/347 (10%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M      L+L   + L I A A S     +     + E ++ WL ++ + Y   DE ++R
Sbjct: 1   MATATTSLALLSFFFLSISASALS-----RRSDGEVREIYDLWLAKHGKAYNGIDEREKR 55

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP--------YNEPRW 134
           F I+  N+++ID  NS+N ++K+  N FADL+NEE+ + YLG   P            R 
Sbjct: 56  FQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEEYRALYLGTRSPPARRVMKAKTASRR 115

Query: 135 PSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
            +V  L  LP S+DWR  GAV PVK+QG CGSCWAFS +AAVEGIN++ TG+L+SLSEQE
Sbjct: 116 YAVNNLDRLPESMDWRTRGAVAPVKNQGSCGSCWAFSTIAAVEGINQIVTGELISLSEQE 175

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LV CD    N GCNGG M+ AF+FI   GG+ TE+DYPY   + +C   +     V+I  
Sbjct: 176 LVSCD-KKYNSGCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQCDPTRKNAKVVSIDA 234

Query: 254 YEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           YE +PA                        A QLY  GVF   CG  L+HGV  VGYG++
Sbjct: 235 YEDVPANDEESLKKAVAHQPVSVAIEASGLALQLYQSGVFTGKCGSALDHGVVAVGYGKE 294

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +G  YWLV+NSWGTSWGE GY ++ RN      G CGI MQASYPVK
Sbjct: 295 NGVDYWLVRNSWGTSWGEDGYFKLERNVKHITEGKCGIAMQASYPVK 341


>gi|413953668|gb|AFW86317.1| hypothetical protein ZEAMMB73_339067 [Zea mays]
          Length = 433

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 192/315 (60%), Gaps = 33/315 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           D   M  R E W+ QYSR Y    E  RRF ++ +NVQ+I+  N+  N  F L  N+FAD
Sbjct: 122 DDSVMVARHEQWMAQYSRVYKDASEKARRFEVFKANVQFIESFNAGGNNKFWLGVNQFAD 181

Query: 113 LSNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           L+N+EF ST        +  + P+      V    LP ++DWR +GAVTP+KDQGQCG C
Sbjct: 182 LTNDEFRSTKTNKGLKSSNMKIPTGFRYENVSADALPTTIDWRTKGAVTPIKDQGQCGCC 241

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA EGI K+ TGKLVSL+EQELVDCDV+ E+QGC GG M+ AF+FI K GG+TT
Sbjct: 242 WAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTT 301

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   + +C++    + A TI GYE +PA                         FQ
Sbjct: 302 ESSYPYTAADGKCKSG--SNSAATIKGYEDVPANDEAALMKAVANQPVSVAVDGGDMTFQ 359

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S  
Sbjct: 360 FYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRMEKD-ISDK 418

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M+ SYP +
Sbjct: 419 RGMCGLAMEPSYPTE 433


>gi|356515086|ref|XP_003526232.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 192/310 (61%), Gaps = 30/310 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSN 115
           SM ER E W+ +Y + Y    E ++RF ++  NV YI+ + N+ N S+KL  N+FADL+N
Sbjct: 34  SMYERHEQWMTRYGKVYKDPQEREKRFRVFKENVNYIEAFNNAANKSYKLGINQFADLTN 93

Query: 116 EEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +EFI+   G+          +  +        P++VDWR++GAVTP+KDQGQCG CWAFS
Sbjct: 94  KEFIAPRNGFKGHMCSSIIRTTTFKFENVTATPSTVDWRQKGAVTPIKDQGQCGCCWAFS 153

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+ L  GKL+SLSEQELVDCD    +QGC GG M+ AF+FI +  G+ TE +Y
Sbjct: 154 AVAATEGIHALSAGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+G + +C  ++   +A TITGYE +PA                         FQ Y  
Sbjct: 214 PYKGVDGKCNANEAAKNAATITGYEDVPANNEMALQKAVANQPVSVAIDASGSDFQFYKS 273

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG  D G +YWLVKNSWGT WGE GYIRM R   S   G+C
Sbjct: 274 GVFTGSCGTELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEE-GLC 332

Query: 328 GILMQASYPV 337
           GI MQASYP 
Sbjct: 333 GIAMQASYPT 342


>gi|125547256|gb|EAY93078.1| hypothetical protein OsI_14879 [Oryza sativa Indica Group]
          Length = 339

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 194/316 (61%), Gaps = 32/316 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           ++ D  +M  R E W++QY R Y    E  RRF I+ +NV +I+  N+ N  F L  N+F
Sbjct: 26  EQSDHAAMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKFWLGVNQF 85

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           ADL+N EF +T        +  R P+      V    LPA+VDWR +GAVTP+KDQGQCG
Sbjct: 86  ADLTNYEFRATKTNKGFIPSTVRVPTTFRYENVSIDTLPATVDWRTKGAVTPIKDQGQCG 145

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+
Sbjct: 146 CCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGL 205

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPY   + +C  +   + A TI GYE +PA                         
Sbjct: 206 TTESKYPYTAADGKC--NGGSNSAATIKGYEEVPANNEAALMKAVANQPVSVAVDGGDMT 263

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GV    CG  L+HG+  +GYG+D  G +YWL+KNSWGT+WGE G++RM ++  S
Sbjct: 264 FQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD-IS 322

Query: 322 SNIGICGILMQASYPV 337
              G+CG+ M+ SYP 
Sbjct: 323 DKRGMCGLAMEPSYPT 338


>gi|13897890|gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea batatas]
          Length = 462

 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 165/357 (46%), Positives = 215/357 (60%), Gaps = 44/357 (12%)

Query: 24  MLRNAVLSLFLLWVLGIPAG-------AWSEGYPQKYDPQSMEE---RFENWLKQYSREY 73
           M +  +LSLF+L  +   +         + E +P K   +S EE    +E+WL ++ + Y
Sbjct: 1   MAKLLILSLFVLAAVSSASASADMSIITYDEEHPAKGLSRSDEEVMALYESWLVEHGKSY 60

Query: 74  -GSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYN----- 126
            G   E  +RF I+  N++YID  NS+ + S+KL  N+FADL+NEE+ STYLG       
Sbjct: 61  NGLGGEKDKRFEIFKDNLRYIDEQNSRGDRSYKLGLNRFADLTNEEYRSTYLGAKTDARR 120

Query: 127 ---KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
              K  ++ R+       LP S+DWR++GAV  VKDQG CGSCWAFS +AAVEGIN++ T
Sbjct: 121 RIAKTKSDRRYAPKAGGSLPDSIDWREKGAVAEVKDQGSCGSCWAFSTIAAVEGINQIVT 180

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G+L+SLSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ TE DYPY G+  RC   +
Sbjct: 181 GELISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTEADYPYTGRYGRCDQTR 239

Query: 244 TKHHAVTITGYEAI---------------PARYA-------FQLYSHGVFDEYCGHQLNH 281
                V+I GYE +               P   A       FQLYS G+F   CG  L+H
Sbjct: 240 KNAKVVSIDGYEDVTPYDEAALKEAVAGQPVSVAIEAGGRDFQLYSSGIFTGSCGTDLDH 299

Query: 282 GVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GVT VGYG ++G  YW+VKNSW  SWGE GY+RM RN    N G+CGI ++ SYP K
Sbjct: 300 GVTAVGYGTENGVDYWIVKNSWAASWGEKGYLRMQRNVKDKN-GLCGIAIEPSYPTK 355


>gi|102140014|gb|ABF70145.1| cysteine protease, putative [Musa acuminata]
          Length = 373

 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 199/340 (58%), Gaps = 37/340 (10%)

Query: 31  SLFLLW--VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           SL  LW  +L +  GA S    +  D  SM ER   W+ ++ R Y    E ++R GI+ S
Sbjct: 3   SLVCLWMALLALGLGACSPAAAELGDA-SMAERHVEWMARHGRTYKDAAEKEQRLGIFKS 61

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLG 141
           NV+YI+  N+    ++L  N+FADL++EEF + + G+        K  N  R  S+    
Sbjct: 62  NVEYIESFNAGKRKYQLAANQFADLTHEEFKAMHTGFKPSGTGAKKAGNGFRHGSLS--S 119

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P SVDWR +GAVTPVKDQG CGSCWAF+ VAAVEGI K+ TGKL+SLSEQ+LVDCDV+ 
Sbjct: 120 VPDSVDWRSKGAVTPVKDQGLCGSCWAFTVVAAVEGITKIVTGKLISLSEQQLVDCDVHG 179

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
           ++QGC GG M+ AFEFI   GG+T+E +YPY      C          TI  +E +P   
Sbjct: 180 KDQGCQGGDMDAAFEFIVNNGGITSEANYPYEEVQRLCNAHNASFVVATIESHEDVPTND 239

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYW 297
                               +   FQLYS GVF   CG  L+H VTVVGYG    G KYW
Sbjct: 240 EKALRKAVANQPVSVGIDAGSSLDFQLYSGGVFSGECGTDLDHAVTVVGYGTTSDGTKYW 299

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           L KNSWG +WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 300 LAKNSWGETWGENGYIRMERDVAAKE-GLCGIAMQASYPT 338


>gi|38346003|emb|CAD40112.2| OSJNBa0035O13.5 [Oryza sativa Japonica Group]
 gi|125589427|gb|EAZ29777.1| hypothetical protein OsJ_13835 [Oryza sativa Japonica Group]
          Length = 339

 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 194/316 (61%), Gaps = 32/316 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           ++ D  +M  R E W++QY R Y    E  RRF I+ +NV +I+  N+ N  F L  N+F
Sbjct: 26  EQSDHAAMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKFWLGVNQF 85

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           ADL+N EF +T        +  R P+      V    LPA+VDWR +GAVTP+KDQGQCG
Sbjct: 86  ADLTNYEFRATKTNKGFIPSTVRVPTTFRYENVSIDTLPATVDWRTKGAVTPIKDQGQCG 145

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+
Sbjct: 146 CCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGL 205

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPY   + +C  +   + A TI GYE +PA                         
Sbjct: 206 TTESKYPYTAADGKC--NGGSNSAATIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMT 263

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GV    CG  L+HG+  +GYG+D  G +YWL+KNSWGT+WGE G++RM ++  S
Sbjct: 264 FQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD-IS 322

Query: 322 SNIGICGILMQASYPV 337
              G+CG+ M+ SYP 
Sbjct: 323 DKRGMCGLAMEPSYPT 338


>gi|356564154|ref|XP_003550321.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 476

 Score =  286 bits (733), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 160/359 (44%), Positives = 211/359 (58%), Gaps = 39/359 (10%)

Query: 17  IAIDMRMMLRNAVLSLFLLWV----LGIPAGAWSEGYPQKYDPQSMEER----FENWLKQ 68
           I      M   A++ LF ++     L +   ++   +  K      EE     +E WL +
Sbjct: 6   ITTSPATMTMAAIVLLFTVFAVSSALDMSIISYDSAHADKAATLRTEEELMSMYEQWLVK 65

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNK 127
           + + Y +  E ++RF I+  N+++ID  NS ++ ++KL  N+FADL+NEE+ + YLG   
Sbjct: 66  HGKVYNALGEKEKRFQIFKDNLRFIDDHNSAEDRTYKLGLNRFADLTNEEYRAKYLGTKI 125

Query: 128 PYNEP--RWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
             N    + PS +Y       LP SVDWRKEGAV PVKDQG CGSCWAFSA+ AVEGINK
Sbjct: 126 DPNRRLGKTPSNRYAPRVGDKLPDSVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINK 185

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 240
           + TG+L+SLSEQELVDCD    NQGCNGG M+ AFEFI   GG+ +++DYPYRG + RC 
Sbjct: 186 IVTGELISLSEQELVDCDTGY-NQGCNGGLMDYAFEFIINNGGIDSDEDYPYRGVDGRCD 244

Query: 241 TDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQ 278
           T +     V+I  YE +PA                         FQLY  GVF   CG  
Sbjct: 245 TYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQLYVSGVFTGRCGTA 304

Query: 279 LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           L+HGV  VGYG   G  YW+V+NSWG+SWGE GYIR+ RN  +S  G CGI ++ SYP+
Sbjct: 305 LDHGVVAVGYGTAKGHDYWIVRNSWGSSWGEDGYIRLERNLANSRSGKCGIAIEPSYPL 363


>gi|356553978|ref|XP_003545327.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 496

 Score =  286 bits (732), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 152/312 (48%), Positives = 196/312 (62%), Gaps = 31/312 (9%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLS 114
           + +   +E WL ++ + Y +  E ++RF I+  N+++ID  NSQ + ++KL  N+FADL+
Sbjct: 73  EELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLT 132

Query: 115 NEEFISTYLGYNKPYNEP--RWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCW 167
           NEE+ + YLG     N    + PS +Y       LP SVDWRKEGAV PVKDQG CGSCW
Sbjct: 133 NEEYRAKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPESVDWRKEGAVPPVKDQGGCGSCW 192

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA+ AVEGINK+ TG+L+SLSEQELVDCD    N+GCNGG M+ AFEFI   GG+ +E
Sbjct: 193 AFSAIGAVEGINKIVTGELISLSEQELVDCDTGY-NEGCNGGLMDYAFEFIINNGGIDSE 251

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQL 265
           +DYPYRG + RC T +     V+I  YE +PA                         FQL
Sbjct: 252 EDYPYRGVDGRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQL 311

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           Y  GVF   CG  L+HGV  VGYG  +G  YW+V+NSWG SWGE GYIR+ RN  +S  G
Sbjct: 312 YVSGVFTGRCGTALDHGVVAVGYGTANGHDYWIVRNSWGPSWGEDGYIRLERNLANSRSG 371

Query: 326 ICGILMQASYPV 337
            CGI ++ SYP+
Sbjct: 372 KCGIAIEPSYPL 383


>gi|157093728|gb|ABV22590.1| KDEL-tailed cysteine endopeptidase [Solanum lycopersicum]
          Length = 360

 Score =  286 bits (732), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 149/311 (47%), Positives = 190/311 (61%), Gaps = 35/311 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E +E W   ++    S DE  +RF ++ +NV Y+   N ++  +KL  NKFAD++N EF 
Sbjct: 36  ELYERWRSHHTVSR-SLDEKHKRFNVFKANVHYVHNFNKKDKPYKLKLNKFADMTNHEFR 94

Query: 120 STYLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
             Y G    ++     + +  G         +P S+DWRK+GAVTPVKDQGQCGSCWAFS
Sbjct: 95  QHYAGSKIKHHRTLLGASRANGTFMYANEDNVPPSIDWRKKGAVTPVKDQGQCGSCWAFS 154

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
            V AVEGIN++KT KLVSLSEQELVDCD  +ENQGCNGG M+ AF+FI K GG+TTE+ Y
Sbjct: 155 TVVAVEGINQIKTKKLVSLSEQELVDCDT-TENQGCNGGLMDPAFDFIKKRGGITTEERY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY+ ++D+C   K     V+I G+E +P                          FQ YS 
Sbjct: 214 PYKAEDDKCDIQKRNTPVVSIDGHEDVPPNDEDALLKAVANQPISVAIDASGSQFQFYSE 273

Query: 269 GVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGV +VGYG    G KYW+VKNSWG  WGE GYIRM R   +   G+C
Sbjct: 274 GVFTGECGTELDHGVAIVGYGTTVDGTKYWIVKNSWGAGWGEKGYIRMQRKVDAEE-GLC 332

Query: 328 GILMQASYPVK 338
           GI MQ SYP+K
Sbjct: 333 GIAMQPSYPIK 343


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/322 (48%), Positives = 203/322 (63%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVE IN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVRNQPVSVAIE 265

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 266 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 325

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 326 NIKASS-GKCGIAVEPSYPLKK 346


>gi|18401614|ref|NP_564497.1| cysteine proteinase RD21a [Arabidopsis thaliana]
 gi|1172873|sp|P43297.1|RD21A_ARATH RecName: Full=Cysteine proteinase RD21a; Short=RD21; Flags:
           Precursor
 gi|12321010|gb|AAG50628.1|AC083835_13 cysteine protease, putative [Arabidopsis thaliana]
 gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis thaliana]
 gi|18175926|gb|AAL59952.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|22136972|gb|AAM91715.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|332194014|gb|AEE32135.1| cysteine proteinase RD21a [Arabidopsis thaliana]
          Length = 462

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 193/306 (63%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSED--EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E WL ++ +        E  RRF I+  N++++D  N +NLS++L   +FADL+N+E+ 
Sbjct: 50  YEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYR 109

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           S YLG        R  S++Y       LP S+DWRK+GAV  VKDQG CGSCWAFS + A
Sbjct: 110 SKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGA 169

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGIN++ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ T+ DYPY+G
Sbjct: 170 VEGINQIVTGDLITLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKG 228

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
            +  C   +     VTI  YE +P                         AFQLY  G+FD
Sbjct: 229 VDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFD 288

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG QL+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RMARN  SS+ G CGI ++
Sbjct: 289 GSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSS-GKCGIAIE 347

Query: 333 ASYPVK 338
            SYP+K
Sbjct: 348 PSYPIK 353


>gi|14517542|gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
 gi|19548039|gb|AAL87383.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 193/306 (63%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSED--EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E WL ++ +        E  RRF I+  N++++D  N +NLS++L   +FADL+N+E+ 
Sbjct: 50  YEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYR 109

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           S YLG        R  S++Y       LP S+DWRK+GAV  VKDQG CGSCWAFS + A
Sbjct: 110 SKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGA 169

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGIN++ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ T+ DYPY+G
Sbjct: 170 VEGINQIVTGDLITLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKG 228

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
            +  C   +     VTI  YE +P                         AFQLY  G+FD
Sbjct: 229 VDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFD 288

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG QL+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RMARN  SS+ G CGI ++
Sbjct: 289 GSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSS-GKCGIAIE 347

Query: 333 ASYPVK 338
            SYP+K
Sbjct: 348 PSYPIK 353


>gi|220983358|dbj|BAH11164.1| cysteine protease [Hordeum vulgare]
          Length = 462

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 195/314 (62%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFA 111
           + +   +  W+ ++   Y    E +RRF  + +N++YID  N+       SF+L  N+FA
Sbjct: 36  EEVRRMYAEWMAEHHSTYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVHSFRLGLNRFA 95

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSC 166
           DL+NEE+ STYLG     +  R  S +Y       LP SVDWRK+GAV  VKDQG CGSC
Sbjct: 96  DLTNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAVGAVKDQGGCGSC 155

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA+AAVEGIN++ TG ++ LSEQELVDCD  S NQGCNGG M+ AFEFI   GG+ +
Sbjct: 156 WAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT-SYNQGCNGGLMDYAFEFIINNGGIDS 214

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E+DYPY+ +++RC  +K     VTI GYE +P                         AFQ
Sbjct: 215 EEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQ 274

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LY  G+F   CG  L+HGV  VGYG ++G+ YWLV+NSWG+ WGE GYIRM RN  +S+ 
Sbjct: 275 LYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGENGYIRMERNIKASS- 333

Query: 325 GICGILMQASYPVK 338
           G CGI ++ SYP K
Sbjct: 334 GKCGIAVEPSYPTK 347


>gi|356543116|ref|XP_003540009.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 337

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/307 (48%), Positives = 188/307 (61%), Gaps = 29/307 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           SM ER E W+K+Y + Y    E Q+R  I+  NV++I+  N+  N  +KL  N  AD +N
Sbjct: 33  SMSERHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAGNKPYKLGINHLADQTN 92

Query: 116 EEFISTYLGYNKPYNEPRWPSV--QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EEF++++ GY    +  + P       G+P +VDWR+ GAVT VKDQGQCGSCWAFS VA
Sbjct: 93  EEFVASHNGYKHKASHSQTPFKYENVTGVPNAVDWRENGAVTAVKDQGQCGSCWAFSTVA 152

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A EGI ++ T  L+SLSEQELVDCD  S + GC+GGYME  FEFI K GG+++E +YPY 
Sbjct: 153 ATEGIYQITTSMLMSLSEQELVDCD--SVDHGCDGGYMEGGFEFIIKNGGISSEANYPYT 210

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
             +  C  +K    A  I GYE +PA                        AFQ YS GVF
Sbjct: 211 AVDGTCDANKEASPAAQIKGYETVPANSEDALQKAVANQPVSVTIDAGGSAFQFYSSGVF 270

Query: 272 DEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
              CG QL+HGVT VGYG  D G +YW+VKNSWGT WGE GYIRM R + +   G+CGI 
Sbjct: 271 TGQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSWGTQWGEEGYIRMQRGTDAQE-GLCGIA 329

Query: 331 MQASYPV 337
           M ASYP 
Sbjct: 330 MDASYPT 336


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 193/306 (63%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSED--EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E WL ++ +        E  RRF I+  N++++D  N +NLS++L   +FADL+N+E+ 
Sbjct: 50  YEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYR 109

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           S YLG        R  S++Y       LP S+DWRK+GAV  VKDQG CGSCWAFS + A
Sbjct: 110 SKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGA 169

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGIN++ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ T+ DYPY+G
Sbjct: 170 VEGINQIVTGDLITLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKG 228

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
            +  C   +     VTI  YE +P                         AFQLY  G+FD
Sbjct: 229 VDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFD 288

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG QL+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RMARN  SS+ G CGI ++
Sbjct: 289 GSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSS-GKCGIAIE 347

Query: 333 ASYPVK 338
            SYP+K
Sbjct: 348 PSYPIK 353


>gi|115484973|ref|NP_001067630.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|530335|emb|CAA56844.1| cysteine protease [Oryza sativa Japonica Group]
 gi|5761322|dbj|BAA83472.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|62732672|gb|AAX94791.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732673|gb|AAX94792.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732674|gb|AAX94793.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|77549615|gb|ABA92412.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549616|gb|ABA92413.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549617|gb|ABA92414.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644852|dbj|BAF27993.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|125576789|gb|EAZ18011.1| hypothetical protein OsJ_33558 [Oryza sativa Japonica Group]
 gi|215701098|dbj|BAG92522.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 378

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/327 (47%), Positives = 195/327 (59%), Gaps = 45/327 (13%)

Query: 56  QSMEERFENWLKQY-------SREYGSED-EWQRRFGIYSSNVQYIDYINSQN-LSFKLT 106
           +S+   +E W  +Y       S   G++D E +RRF ++  N +YI   N +    F+L 
Sbjct: 36  ESLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLA 95

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEP-------RWPSVQYLG-----LPASVDWRKEGAV 154
            NKFAD++ +EF  TY G    ++            S +Y G     LP +VDWR+ GAV
Sbjct: 96  LNKFADMTTDEFRRTYAGSRARHHRSLSGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAV 155

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
           T +KDQGQCGSCWAFS VAAVEG+NK+KTG+LV+LSEQELVDCD   +NQGC+GG M+ A
Sbjct: 156 TGIKDQGQCGSCWAFSTVAAVEGVNKIKTGRLVTLSEQELVDCDT-GDNQGCDGGLMDYA 214

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------- 260
           F+FI + GG+TTE +YPYR +  RC   K   H VTI GYE +PA               
Sbjct: 215 FQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPV 274

Query: 261 --------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAG 311
                     FQ YS GVF   CG  L+HGV  VGYG    G KYW+VKNSWG  WGE G
Sbjct: 275 AVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERG 334

Query: 312 YIRMARNSPSSNIGICGILMQASYPVK 338
           YIRM R   S + G+CGI M+ASYPVK
Sbjct: 335 YIRMQRGVSSDSNGLCGIAMEASYPVK 361


>gi|357154164|ref|XP_003576692.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 427

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/315 (49%), Positives = 189/315 (60%), Gaps = 38/315 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M  RFE W+ ++ R Y +  E QRRF +Y  N+  I+  NS    + LTDNKFADL+NEE
Sbjct: 115 MRMRFEQWMGKHGRAYANGGEKQRRFEVYKENLALIEEFNSGGHGYTLTDNKFADLTNEE 174

Query: 118 FISTYLG-----------YNKPYNEPRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           F +  LG                N    P +     LP  VDWRK+GAV  VK+QG CGS
Sbjct: 175 FRAKMLGGLGADPDRRRRARHASNALELPGNDNSTDLPKDVDWRKKGAVVEVKNQGSCGS 234

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EG+N++K GKLVSLSEQELVDCD  +E  GC GG+M  AFEF+    G+T
Sbjct: 235 CWAFSAVAAMEGLNQIKNGKLVSLSEQELVDCD--AEAVGCAGGFMSWAFEFVMANHGLT 292

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TE  YPY+G N  CQT K    +V+ITGY  +                         + F
Sbjct: 293 TEASYPYKGINGACQTAKLNESSVSITGYVNVTVNSEAELLKVAAVQPVSVAVDAGGFLF 352

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           QLY+ GVF   C  Q+NHGVTVVGYGE D  EKYW+VKNSWG  WGEAGY+ M R++   
Sbjct: 353 QLYAGGVFSGPCTAQINHGVTVVGYGETDKAEKYWIVKNSWGPEWGEAGYMLMQRDA-GV 411

Query: 323 NIGICGILMQASYPV 337
             G+CGI M ASYPV
Sbjct: 412 PTGLCGIAMLASYPV 426


>gi|302759380|ref|XP_002963113.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
 gi|300169974|gb|EFJ36576.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
          Length = 479

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/329 (47%), Positives = 199/329 (60%), Gaps = 45/329 (13%)

Query: 53  YDPQ--SMEER----FENWLKQYSREYGSE--------DEWQRRFGIYSSNVQYIDYINS 98
           YDPQ  S EER    F++W+ Q+ + Y            E   R+GI+  N+++I   N 
Sbjct: 42  YDPQDLSSEERLQALFDSWMLQHGKSYAENALSGDSQAGEKATRYGIFKDNLRFIHGENE 101

Query: 99  QNLSFKLTDNKFADLSNEEFISTYLG-------YNKPYNEPRWPSVQYLGLPASVDWRKE 151
           +N  + L  N FADL+NEEF +   G           Y E R+ SVQ   LP S+DWR++
Sbjct: 102 KNQGYFLGLNAFADLTNEEFRAQRHGGRFDRSRERTSYEEFRYGSVQLKDLPDSIDWREK 161

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAV  VKDQG CGSCWAFSAVAA+EG+NKL TG+LVSLSEQELVDCD   E++GCNGG M
Sbjct: 162 GAVVGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLSEQELVDCD-KGEDEGCNGGLM 220

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------- 260
           + AF F+ K GG+ TE DYPY+G   RC   K     VTI GYE +P             
Sbjct: 221 DYAFGFVIKNGGLDTEADYPYKGYGTRCDRSKMNAKVVTIDGYEDVPVNDETALLKAVAH 280

Query: 261 -----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGE 309
                       + Q Y  G+F   CG  L+HGVT VGYG++ G+ YW++KNSWG++WGE
Sbjct: 281 QPVSVAIDAGGSSMQFYRSGIFTGRCGTDLDHGVTNVGYGKEDGKAYWIIKNSWGSNWGE 340

Query: 310 AGYIRMARNSPSSNIGICGILMQASYPVK 338
            GYI+MARN+  +  G+CGI M+ASYP K
Sbjct: 341 KGYIKMARNTGLA-AGLCGINMEASYPTK 368


>gi|357471211|ref|XP_003605890.1| Cysteine proteinase [Medicago truncatula]
 gi|355506945|gb|AES88087.1| Cysteine proteinase [Medicago truncatula]
          Length = 343

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/310 (49%), Positives = 191/310 (61%), Gaps = 31/310 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSN 115
           M ER   W+ QY + Y    E ++RF I++ NV YI+  N    N  + L  N+FADL+N
Sbjct: 34  MYERHRQWMSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDNNKLYTLGVNQFADLTN 93

Query: 116 EEFISTYLGYNKPY--NEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +EF S+   +      +  R  + +Y     +P+SVDWRK+GAVTPVK+QGQCG CWAFS
Sbjct: 94  DEFTSSRNKFKGHMCSSITRTSTFKYENASAIPSSVDWRKKGAVTPVKNQGQCGCCWAFS 153

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+KL TGKL+SLSEQELVDCD    +QGC GG M+ AF+FI +  G+ TE +Y
Sbjct: 154 AVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+G +  C  +K   +AVTITGYE +P                          FQ Y  
Sbjct: 214 PYQGVDGTCNANKGSINAVTITGYEDVPTNNEQALQKAVANQPISVAIDASGSDFQFYKS 273

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG  + G KYWLVKNSWGT WGE GYI M R   ++  G+C
Sbjct: 274 GVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTEWGEEGYIMMQRGVDAAE-GLC 332

Query: 328 GILMQASYPV 337
           GI MQASYP 
Sbjct: 333 GIAMQASYPT 342


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/319 (46%), Positives = 196/319 (61%), Gaps = 34/319 (10%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFA 111
           YD       +E WL ++ + Y +  E +RRF I+  N+++I+  N + + S+KL  NKFA
Sbjct: 39  YDESHTRHVYEAWLVKHGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKSYKLGLNKFA 98

Query: 112 DLSNEEFISTYLGYNK--PYNEP--------RWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           DL+NEE+ + +LG     P N+         R+       LPA VDWR++GAVTP+KDQG
Sbjct: 99  DLTNEEYRAMFLGTRTRGPKNKAAVVAKKTDRYAYRAGEELPAMVDWREKGAVTPIKDQG 158

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCGSCWAFS V AVEGIN++ TG L SLSEQELVDCD    N GCNGG M+ AFEFI + 
Sbjct: 159 QCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCD-RGYNMGCNGGLMDYAFEFIVQN 217

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------- 260
           GG+ TE+DYPY  K++ C  ++     VTI GYE +P                       
Sbjct: 218 GGIDTEEDYPYHAKDNTCDPNRKNARVVTIDGYEDVPTNDEKSLMKAVANQPVSVAIEAG 277

Query: 261 -YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
              FQLY  GVF   CG  L+HGV  VGYG ++G  YWLV+NSWG++WGE GYI++ RN 
Sbjct: 278 GMEFQLYQSGVFTGRCGTNLDHGVVAVGYGTENGTDYWLVRNSWGSAWGENGYIKLERNV 337

Query: 320 PSSNIGICGILMQASYPVK 338
            ++  G CGI ++ASYP+K
Sbjct: 338 QNTETGKCGIAIEASYPIK 356


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 191/313 (61%), Gaps = 30/313 (9%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFA 111
           D  ++ E+ E W+  Y + Y    E + R  I+  NV YI+  N+   N  +KL  N+FA
Sbjct: 33  DDSNIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFA 92

Query: 112 DLSNEEFISTYLGYN----KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           DL+NEEFI++   +         +      +   +P++VDWRK+GAVTPVK+QGQCG CW
Sbjct: 93  DLTNEEFIASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKKGAVTPVKNQGQCGCCW 152

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA EGI+KL TGKLVSLSEQELVDCD    +QGC GG M+ AF+FI +  G+ TE
Sbjct: 153 AFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTE 212

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQL 265
             YPY+G +  C  +K   HAVTITGYE +PA                         FQ 
Sbjct: 213 AQYPYQGVDGTCSANKASIHAVTITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQF 272

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GVF   CG +L+HGVT VGYG  + G KYWLVKNSWGT WGE GYI+M R   ++  
Sbjct: 273 YKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAE- 331

Query: 325 GICGILMQASYPV 337
           G+CGI M+ASYP 
Sbjct: 332 GLCGIAMEASYPT 344


>gi|413953667|gb|AFW86316.1| hypothetical protein ZEAMMB73_635707 [Zea mays]
          Length = 340

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 194/315 (61%), Gaps = 33/315 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           D  +M  R E W+ QYSR Y    E  RRF ++ +NV++I+  N+  N  F L  N+FAD
Sbjct: 29  DDSAMVARHEQWMAQYSRVYKDASEKARRFEVFKANVKFIESFNAGGNNKFWLGVNQFAD 88

Query: 113 LSNEEF--ISTYLGYN----KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           L+N+EF  I T  G+     K     R+ +V    LP ++DWR +GAVTP+KDQGQCG C
Sbjct: 89  LTNDEFRSIKTNKGFKSSNMKIPTGFRYENVSVDALPTTIDWRTKGAVTPIKDQGQCGCC 148

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA EGI K+ TGKLVSL+EQELVDCDV+ E+QGC GG M+ AF+FI   GG+TT
Sbjct: 149 WAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIINNGGLTT 208

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   + +C++    + A TI GYE +PA                         FQ
Sbjct: 209 ESSYPYTAADGKCKSG--SNSAATIKGYEDVPANDEAALMKAVANQPVSVAVDGGDMTFQ 266

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S  
Sbjct: 267 FYSSGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRMEKD-ISDK 325

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M+ SYP +
Sbjct: 326 RGMCGLAMEPSYPTE 340


>gi|355344587|gb|AER60490.1| cysteine proteases [Gossypium hirsutum]
          Length = 371

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 199/309 (64%), Gaps = 34/309 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFIS 120
           +++W+ Q+ + Y    E ++RF I+  N+++ID  NS N  ++KL  NKFADL+N+E+ +
Sbjct: 45  YKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYRA 104

Query: 121 TYLGYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            +LG      +   + + PS +Y       LP SVDWR  GAV+PVKDQG CGSCWAFS 
Sbjct: 105 KFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVDWRDHGAVSPVKDQGSCGSCWAFST 164

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +A VEGINK+ +G+LVSLSEQELVDCD  S + GCNGG M+ AF+FI   GG+ TE DYP
Sbjct: 165 IATVEGINKIVSGELVSLSEQELVDCD-RSYDAGCNGGLMDYAFQFIMDNGGIDTEKDYP 223

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------YAFQLYSHGV 270
           Y G N++C   K     V+I GYE +P                        AFQLY  GV
Sbjct: 224 YLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKKAVAHQPVSIAIEAGGRAFQLYESGV 283

Query: 271 FDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F+  CG  L+HGV  VGYG +D+G+ YW+V+NSWG++WGE GYIRM RN  ++N G CGI
Sbjct: 284 FNGECGLALDHGVVAVGYGTDDNGQDYWIVRNSWGSNWGENGYIRMERN-INANTGKCGI 342

Query: 330 LMQASYPVK 338
            M+ASYPVK
Sbjct: 343 AMEASYPVK 351


>gi|34223513|gb|AAQ62999.1| oil palm polygalacturonase allergen PEST472 [Elaeis guineensis]
          Length = 525

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 152/318 (47%), Positives = 198/318 (62%), Gaps = 37/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFA 111
           + M   +E WL ++ R   +  E +RRF I+  NV++ID  N    S + SF+L  N+FA
Sbjct: 44  EEMRLLYEGWLAKHGRADNALGEKERRFEIFKDNVRFIDAHNAAADSGHRSFRLGLNRFA 103

Query: 112 DLSNEEFISTYLGYNKPYN---EPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQC 163
           D++NEE+ + YLG  +P +     R  S +Y       LP SVDWR +GAVT VKDQG C
Sbjct: 104 DMTNEEYRTVYLG-TRPASHRRRARLGSDRYRYNAGEELPESVDWRDKGAVTTVKDQGSC 162

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS +AAVEGINK+ TG L+SLSEQELVDCD N +NQGCNGG M+ AFEFI   GG
Sbjct: 163 GSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCD-NGQNQGCNGGLMDYAFEFIINNGG 221

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           + TE+DYPY+ ++ +C   +     V+I GYE +P                         
Sbjct: 222 IDTEEDYPYKARDGKCDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQPVSVAIEAGGR 281

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            FQLY  G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG  WGE+GYIRM RN  +
Sbjct: 282 EFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKDYWIVRNSWGGDWGESGYIRMERNVNA 341

Query: 322 SNIGICGILMQASYPVKR 339
           S  G CGI M++SYP K+
Sbjct: 342 S-TGKCGIAMESSYPTKK 358


>gi|224083868|ref|XP_002307151.1| predicted protein [Populus trichocarpa]
 gi|222856600|gb|EEE94147.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 150/306 (49%), Positives = 188/306 (61%), Gaps = 35/306 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNE 116
           M ER E W+ QY R Y  + E + R+ I+  NV  ID  NSQ   S+ L  N+FADLSNE
Sbjct: 1   MYERHEQWMAQYGRVYKDDAEKETRYNIFKENVARIDAFNSQTGKSYNLGVNQFADLSNE 60

Query: 117 EFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EF ++   +      P+    +Y     +PA++DWRK+GAVTPVKDQGQC        VA
Sbjct: 61  EFKASRNRFKGHMCSPQAGPFRYENVSAVPATMDWRKKGAVTPVKDQGQC--------VA 112

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EGIN+L TGKL+SLSEQE+VDCD   E+QGCNGG M+ AF+FI +  G+TTE +YPY 
Sbjct: 113 AMEGINQLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYT 172

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
           G +  C T K   HA  ITG++ +PA                       + FQ YS G+F
Sbjct: 173 GTDGTCNTQKEVSHAAKITGFQDVPANSEAALMKAVAKQPVSVAIDAGGFEFQFYSSGIF 232

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG +L+HGVT VGYG   G KYWLVKNSWG  WGE GYIRM ++  S+  G+CGI M
Sbjct: 233 TGSCGTELDHGVTAVGYGGSDGTKYWLVKNSWGAQWGEEGYIRMQKD-ISAKEGLCGIAM 291

Query: 332 QASYPV 337
           QASYP 
Sbjct: 292 QASYPT 297


>gi|162459393|ref|NP_001105993.1| cysteine protease component of protease-inhibitor complex precursor
           [Zea mays]
 gi|6682829|dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
           mays]
          Length = 465

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 201/321 (62%), Gaps = 34/321 (10%)

Query: 49  YPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFK 104
           Y ++ D ++    +  W+  + R Y +  E +RR+ ++  N++YID  N+       SF+
Sbjct: 32  YGERSDEEA-RRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFR 90

Query: 105 LTDNKFADLSNEEFISTYLGY-NKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKD 159
           L  N+FADL+N+E+ +TYLG   +P  E     R+ +     LP SVDWR +GAV  VKD
Sbjct: 91  LGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAVAEVKD 150

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG  GSCWAFS +AAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI 
Sbjct: 151 QGSYGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFII 209

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TE DYPY+G + RC  ++     VTI  YE +PA                    
Sbjct: 210 NNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIE 269

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
                FQLYS G+F   CG  L+HGVT VGYG ++G+ YW+VKNSWG+SWGE+GY+RM R
Sbjct: 270 AAGTQFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMER 329

Query: 318 NSPSSNIGICGILMQASYPVK 338
           N  +S+ G CGI ++ SYP+K
Sbjct: 330 NIKASS-GKCGIAVEPSYPLK 349


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/305 (49%), Positives = 192/305 (62%), Gaps = 32/305 (10%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG 124
           WL+++ + Y    E  +RF I+ +N+++ID  NSQN ++K+   KFADL+N+E+ + +LG
Sbjct: 31  WLQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQNRTYKVGLTKFADLTNQEYRAMFLG 90

Query: 125 Y----NKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
                 +   + + PS +Y       LP SVDWR +GAV P+KDQG CGSCWAFS VAAV
Sbjct: 91  TRSDPKRRLMKSKNPSERYAYKAGDKLPESVDWRGKGAVNPIKDQGSCGSCWAFSTVAAV 150

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG+L+SLSEQELVDCD    N GCNGG M+ AF+FI   GG+ TE DYPY G 
Sbjct: 151 EGINQIVTGELISLSEQELVDCD-RFYNAGCNGGLMDYAFQFIINNGGLDTEKDYPYLGN 209

Query: 236 NDRCQTDKTKHHAVTITGYE---------------------AIPAR-YAFQLYSHGVFDE 273
           +D C  DK K  AV+I G+E                     AI A   A Q Y  GVF  
Sbjct: 210 DDTCDRDKMKTKAVSIDGFEDVLPFDEKALQKAVAHQPVSVAIEASGMALQFYQSGVFTG 269

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            CG  L+HGV VVGYG + G  YWLV+NSWGT WGE GYI+M RN   +  G CGI M++
Sbjct: 270 ECGTALDHGVVVVGYGTEKGLDYWLVRNSWGTEWGEHGYIKMQRNVRDTYTGRCGIAMES 329

Query: 334 SYPVK 338
           SYPVK
Sbjct: 330 SYPVK 334


>gi|30141021|dbj|BAC75924.1| cysteine protease-2 [Helianthus annuus]
          Length = 362

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/330 (46%), Positives = 199/330 (60%), Gaps = 40/330 (12%)

Query: 44  AWSEGYPQKY--DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL 101
           AWS  + +K      ++ + +E W  + +  +G   E  RRF ++ SNV ++   N  + 
Sbjct: 20  AWSFDFHEKELETEDNLWDMYERWRHKVATNHG---EKLRRFNVFKSNVLHVHETNKMDK 76

Query: 102 SFKLTDNKFADLSNEEFISTYLG-----YNKPYNEPRWPSVQYL-----GLPASVDWRKE 151
            +KL  NKFAD++N EF S Y G     +++     R  S  ++      +P SVDWRK+
Sbjct: 77  PYKLKLNKFADMTNHEFRSVYAGSKIHHHDRSLQGDRSGSKTFMYANVESVPTSVDWRKK 136

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAV PVKDQGQCGSCWAFS VAAVEGINK+KT +LVSLSEQELVDCD   ENQGCNGG M
Sbjct: 137 GAVAPVKDQGQCGSCWAFSTVAAVEGINKIKTNELVSLSEQELVDCDT-LENQGCNGGLM 195

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------------- 258
           + AF+FI K GG+T ED YPY  ++ +C ++K     V+I G+E +P             
Sbjct: 196 DLAFDFIKKTGGLTREDAYPYAAEDGKCDSNKMNSPVVSIDGHEDVPKNDEQSLMKAVAN 255

Query: 259 ---------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWG 308
                        FQ YS GVF   CG QL+HGV  VGYG    G KYW+V+NSWG+ WG
Sbjct: 256 QPVAVAIDAGSSDFQFYSEGVFTGKCGTQLDHGVAAVGYGTTLDGTKYWIVRNSWGSEWG 315

Query: 309 EAGYIRMARNSPSSNIGICGILMQASYPVK 338
           E GYIRM R   S   G+CGI M+ASYP+K
Sbjct: 316 EKGYIRMER-GISDKRGLCGIAMEASYPIK 344


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 192/306 (62%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSED--EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E WL ++ +        E  RRF I+  N+++ID  N +NLS++L   +FADL+N+E+ 
Sbjct: 43  YEAWLVKHGKAQNQNSLVEKDRRFEIFKDNLRFIDDHNKKNLSYRLGLTRFADLTNDEYR 102

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           S YLG        R  S +Y       LP S+DWRK+GAV  VKDQG CGSCWAFS + A
Sbjct: 103 SKYLGAKMEKKGERRTSQRYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGA 162

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGIN++ TG L++LSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ T+ DYPY+G
Sbjct: 163 VEGINQIVTGDLITLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKG 221

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
            +  C   +     VTI  YE +P                         AFQLY  G+FD
Sbjct: 222 VDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPVSVAIEAGGRAFQLYDSGIFD 281

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG QL+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY++MARN  SS+ G CGI ++
Sbjct: 282 GTCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLKMARNIASSS-GKCGIAIE 340

Query: 333 ASYPVK 338
            SYP+K
Sbjct: 341 PSYPIK 346


>gi|356539398|ref|XP_003538185.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/342 (44%), Positives = 197/342 (57%), Gaps = 29/342 (8%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M  +  +   F L +  + A    EG  +  +   M ER E W+  + + Y    E +++
Sbjct: 1   MAFKKVLFQYFTLALCLVFAFCAFEGNARTLEDAPMRERHEQWMAIHGKVYTHSYEKEQK 60

Query: 83  FGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEF--ISTYLGY--NKPYNEPRWPSV 137
           +  +  NVQ I+  N + N  +KL  N FADL+NEEF  I+ + G+  +K    P +   
Sbjct: 61  YQTFKENVQRIEAFNHAGNKPYKLGINHFADLTNEEFKAINRFKGHVCSKITRTPTFRYE 120

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
               +PA++DWR+EGAVTP+KDQGQCG CWAFSAVAA EGI KL TGKL+SLSEQELVDC
Sbjct: 121 NMTAVPATLDWRQEGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDC 180

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
           D    +QGC GG M+ AF+FI +  G+  E  YPY G +  C      +HA +I GYE +
Sbjct: 181 DTKGVDQGCEGGLMDDAFKFILQNKGLAAEAIYPYEGVDGTCNAKAEGNHATSIKGYEDV 240

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGE 294
           PA                       + FQ YS GVF   CG  L+HGVT VGYG  D G 
Sbjct: 241 PANSESALLKAVANQPVSVAIEASGFEFQFYSGGVFTGSCGTNLDHGVTAVGYGVSDDGT 300

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           KYWLVKNSWG  WG+ GYIRM R+  +   G+CGI M ASYP
Sbjct: 301 KYWLVKNSWGVKWGDKGYIRMQRDVAAKE-GLCGIAMLASYP 341


>gi|357160572|ref|XP_003578808.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 192/313 (61%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  SM  R ENW+ QY R Y    E  ++F ++ +N ++I+  N+ N  F L  N+FAD+
Sbjct: 29  DDLSMVARHENWMLQYGRVYKDAAEKAQKFEVFKANAEFINSFNAGNHKFWLGINQFADI 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +NEEF +T        N+ R P+      + +  LPA++DWR +GAVTP+KDQGQCG CW
Sbjct: 89  TNEEFKATKTNKGFISNKVRVPTGFMYENMSFDALPATIDWRTKGAVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKLVSLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+T E
Sbjct: 149 AFSAVAAMEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTQE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   + +C++  +   A TI  YE +PA                         FQ 
Sbjct: 209 SNYPYDAADGKCKSGSS--SAATIKSYEDVPANNEGALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV    CG  L+HG+  +GYG    G K+W++KNSWGTSWGE G++RM ++      
Sbjct: 267 YSGGVMTGSCGTDLDHGIAAIGYGTTSDGTKFWIMKNSWGTSWGENGFLRMEKDIADKK- 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|18423124|ref|NP_568722.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75309064|sp|Q9FGR9.1|CEP1_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP1; AltName:
           Full=Cysteine proteinase CP56; Short=AtCP56; Flags:
           Precursor
 gi|9759028|dbj|BAB09397.1| cysteine endopeptidase [Arabidopsis thaliana]
 gi|20258850|gb|AAM13907.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|308097832|gb|ADO14465.1| papain [Arabidopsis thaliana]
 gi|332008536|gb|AED95919.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 161/348 (46%), Positives = 208/348 (59%), Gaps = 38/348 (10%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEWQRR 82
           M R  VL+L +L VL    G   + + +  + + S+ E +E W   ++    S +E  +R
Sbjct: 1   MKRFIVLALCMLMVLETTKGL--DFHNKDVESENSLWELYERWRSHHTVAR-SLEEKAKR 57

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN------EPRWPS 136
           F ++  NV++I   N ++ S+KL  NKF D+++EEF  TY G N  ++      +    S
Sbjct: 58  FNVFKHNVKHIHETNKKDKSYKLKLNKFGDMTSEEFRRTYAGSNIKHHRMFQGEKKATKS 117

Query: 137 VQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
             Y     LP SVDWRK GAVTPVK+QGQCGSCWAFS V AVEGIN+++T KL SLSEQE
Sbjct: 118 FMYANVNTLPTSVDWRKNGAVTPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQE 177

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDCD N +NQGCNGG M+ AFEFI + GG+T+E  YPY+  ++ C T+K     V+I G
Sbjct: 178 LVDCDTN-QNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDETCDTNKENAPVVSIDG 236

Query: 254 YEAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           +E +P                          FQ YS GVF   CG +LNHGV VVGYG  
Sbjct: 237 HEDVPKNSEDDLMKAVANQPVSVAIDAGGSDFQFYSEGVFTGRCGTELNHGVAVVGYGTT 296

Query: 292 -HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
             G KYW+VKNSWG  WGE GYIRM R       G+CGI M+ASYP+K
Sbjct: 297 IDGTKYWIVKNSWGEEWGEKGYIRMQRGIRHKE-GLCGIAMEASYPLK 343


>gi|30141027|dbj|BAC75927.1| cysteine protease-5 [Helianthus annuus]
          Length = 365

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 148/317 (46%), Positives = 195/317 (61%), Gaps = 35/317 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLS 114
           + +   +E WL ++ + Y +  E + RF I++ N+++ID  N S N S+K+  N+FADL+
Sbjct: 30  EEVRNTYELWLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVGLNQFADLT 89

Query: 115 NEEFISTYLGYN-KPYNE----------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
           NEE+ S YLG    PY             R+   +    PA VDWR+ GAV+PVK+QG C
Sbjct: 90  NEEYRSMYLGTKVDPYRRIAKMQRGEISRRYAVQENEMFPAKVDWRERGAVSPVKNQGGC 149

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS VA+VEGINK+ TG L+SLSEQELVDCD N  N GCNGG M+ AF+FI   GG
Sbjct: 150 GSCWAFSTVASVEGINKIVTGDLISLSEQELVDCD-NKYNSGCNGGSMDYAFQFIVSNGG 208

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARY 261
           + +E DYPY+G    C   + K   V+I GYE +P                      +  
Sbjct: 209 IDSESDYPYKGVGAVCDPVRNKAKIVSIDGYEDVPPMNEKALMKAVAHQPVSVGIEASGR 268

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           AFQLY+ GV    CG  L+HGV VVGYG ++G+ YW+V+NSWG  WGE GYIRM RN   
Sbjct: 269 AFQLYTSGVLTGSCGTNLDHGVVVVGYGSENGKDYWIVRNSWGPEWGEDGYIRMERNMVD 328

Query: 322 SNIGICGILMQASYPVK 338
           + +G+CGI + ASYP+K
Sbjct: 329 TPVGMCGITLMASYPIK 345


>gi|224102377|ref|XP_002312656.1| predicted protein [Populus trichocarpa]
 gi|222852476|gb|EEE90023.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 153/347 (44%), Positives = 202/347 (58%), Gaps = 35/347 (10%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M  R  +L++F + ++   A ++          + + + +E W   ++    S  E Q R
Sbjct: 1   MDTRKVILAVFSVVLVFRLADSFDYTEEDLASEERLRDLYERWRSHHTVSR-SLAEKQER 59

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG- 141
           F ++  N+++I  +N ++  +KL  N FAD++N EF+  Y G    +        Q  G 
Sbjct: 60  FNVFKENLKHIHKVNHKDRPYKLKLNSFADMTNHEFLQHYGGSKVSHYRVLRGQRQGTGS 119

Query: 142 -------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  LP+SVDWRK GAVT +KDQG+CGSCWAFS VAAVEGINK+KTG+L+SLSEQEL
Sbjct: 120 MHEDTSKLPSSVDWRKNGAVTGIKDQGKCGSCWAFSTVAAVEGINKIKTGELISLSEQEL 179

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD  S+N GCNGG ME AF FI +IGG+T+E+ YPYR K + C ++K     V I GY
Sbjct: 180 VDCD--SDNHGCNGGLMEDAFNFIKQIGGLTSENTYPYRAKEEPCDSNKMNSPVVNIDGY 237

Query: 255 EAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           E +P                           Q YS  +F   CG +LNHGV +VGYG   
Sbjct: 238 EMVPENDENALMKAVANQPVAIAMDAGGKDLQFYSEAIFTGDCGTELNHGVALVGYGTTQ 297

Query: 293 -GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            G KYW+VKNSWGT WGE GYIRM R   +   G+CGI M+ASYPVK
Sbjct: 298 DGTKYWIVKNSWGTDWGEKGYIRMQRGIDAEE-GLCGITMEASYPVK 343


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 190/307 (61%), Gaps = 31/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y +  E +RRF I+  N+++I+  N+ N ++K+  N+FADL+NEE+ S 
Sbjct: 54  YEAWLVKHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGLNRFADLTNEEYRSR 113

Query: 122 YLGYNKPYNE--------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           YLG                R+       LP SVDWR++GAV PVKDQG CGSCWAFS +A
Sbjct: 114 YLGRRDETRRGLRASRVSDRYSFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIA 173

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI   GG+ +E+DYPYR
Sbjct: 174 AVEGINQIATGDLISLSEQELVDCD-KSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYR 232

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
             +  C  ++     V+I GYE +P                         AFQLY  GVF
Sbjct: 233 AADTTCDPNRKNARVVSIDGYEDVPQNDERSLKKAVANQPVSVAIEAGGRAFQLYQSGVF 292

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG QL+HGV  VGYG ++   YW+V+NSWG +WGE+GYI++ RN   +  G CGI +
Sbjct: 293 TGQCGTQLDHGVVAVGYGTENSVDYWIVRNSWGPNWGESGYIKLERNLAGTETGKCGIAI 352

Query: 332 QASYPVK 338
           + SYP+K
Sbjct: 353 EPSYPIK 359


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 192/312 (61%), Gaps = 37/312 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDY----INSQNLSFKLTDNKFADLSNEE 117
           ++ W  Q++R Y + DE ++R  I+  N+++ID      N+   SF+L   +FADL+NEE
Sbjct: 47  YQAWKAQHARSYNALDEDEQRLEIFRDNLRFIDQHNAAANAGKYSFRLGLTRFADLTNEE 106

Query: 118 FISTYLGY---------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           + STYLG          N      R+       LP S+DWR +GAV  VKDQG CGSCWA
Sbjct: 107 YRSTYLGVRTAGSRRRRNSTVGSNRYRFRSSDDLPDSIDWRDKGAVVDVKDQGSCGSCWA 166

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS +AAVEGIN + TG L+SLSEQELVDCD    NQGCNGG M+ AFEFI   GG+ T++
Sbjct: 167 FSTIAAVEGINHIVTGDLISLSEQELVDCDT-YYNQGCNGGLMDYAFEFIISNGGIDTDE 225

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY G++  C   +   H VTI  YE +P                         AFQLY
Sbjct: 226 DYPYTGRDGSCDQYRKNAHVVTIDSYEDVPINDEKSLQKAVANQPVSVAIEAGGRAFQLY 285

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
             G+F  YCG +L+HGVT +GYG ++G+ YW+VKNSWG+ WGE+GYIRM RN  S+  G 
Sbjct: 286 ESGIFTGYCGTELDHGVTAIGYGSENGKYYWIVKNSWGSDWGESGYIRMERNINSA-TGK 344

Query: 327 CGILMQASYPVK 338
           CGI M+ASYP+K
Sbjct: 345 CGIAMEASYPIK 356


>gi|297792329|ref|XP_002864049.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309884|gb|EFH40308.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 162/348 (46%), Positives = 206/348 (59%), Gaps = 38/348 (10%)

Query: 24  MLRNAVLSLFLLWVLGIPAGA-WSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M R  VL+L +L VL       + E   +  D  S+ E +E W K +     S +E  +R
Sbjct: 1   MKRFIVLALCMLMVLETTKSLDFHEKDVESED--SLWELYERW-KSHHTIARSLEEKAKR 57

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN----KPYNEPRWPSVQ 138
           F ++  NV++I   N +  S+KL  NKF D+++EEF  TY G N    + +   R  +  
Sbjct: 58  FNVFKHNVKHIHETNKKENSYKLKLNKFGDMTSEEFRRTYAGSNIKHHRMFQGERQTTKS 117

Query: 139 YL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           ++      LP SVDWRK GAVTPVK+QGQCGSCWAFS V AVEGIN+++T KL SLSEQE
Sbjct: 118 FMYANVDTLPTSVDWRKNGAVTPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQE 177

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDCD N +NQGCNGG M+ AFEFI + GG+T+E  YPY+  ++ C T+K     V+I G
Sbjct: 178 LVDCDTN-KNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDETCDTNKENAPVVSIDG 236

Query: 254 YEAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           +E +P                          FQ YS GVF   CG +LNHGV VVGYG  
Sbjct: 237 HEDVPKNSEVDLMKAVAHQPVSVAIDAGGSDFQFYSEGVFTGRCGTELNHGVAVVGYGTT 296

Query: 292 -HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
             G KYW+VKNSWG  WGE GYIRM R       G+CGI M+ASYP+K
Sbjct: 297 IDGTKYWIVKNSWGEEWGEKGYIRMQRGIRHKE-GLCGIAMEASYPLK 343


>gi|225456820|ref|XP_002278323.1| PREDICTED: vignain [Vitis vinifera]
          Length = 360

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 151/315 (47%), Positives = 193/315 (61%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+   +E W   ++    S DE  +RF ++  NV ++   N ++  +KL  NKFAD++N
Sbjct: 32  ESLWNLYERWRSHHTVSR-SLDEKHKRFNVFKENVNFVHEFNKKDEPYKLKLNKFADMTN 90

Query: 116 EEFISTYLG----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF STY G    +++ +   +  +  ++      +P SVDWRK+GAVTP+KDQGQCGSC
Sbjct: 91  HEFRSTYAGSKVNHHRMFRGSQHAAGSFMYEKVKSVPPSVDWRKKGAVTPIKDQGQCGSC 150

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN +KT KLVSLSEQELVDCD  SENQGCNGG M  AFEFI + GG+TT
Sbjct: 151 WAFSTVVAVEGINHIKTNKLVSLSEQELVDCDT-SENQGCNGGLMGYAFEFIKEKGGITT 209

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY  ++  C   K     V+I G+E +P                         AFQ
Sbjct: 210 EQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDALLKAAANQPISVAIDAGGSAFQ 269

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG  L+HGV +VGYG    G KYW+VKNSWGT WGE GYIRM R   S+ 
Sbjct: 270 FYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTDWGENGYIRMKR-GISAK 328

Query: 324 IGICGILMQASYPVK 338
            G+CGI ++ASYP+K
Sbjct: 329 EGLCGIAVEASYPIK 343


>gi|302796898|ref|XP_002980210.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
 gi|300151826|gb|EFJ18470.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
          Length = 479

 Score =  283 bits (724), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 154/329 (46%), Positives = 199/329 (60%), Gaps = 45/329 (13%)

Query: 53  YDPQ--SMEER----FENWLKQYSREYGSE--------DEWQRRFGIYSSNVQYIDYINS 98
           YDPQ  S EER    F++W+ Q+ + Y            E   R+GI+  N+++I   N 
Sbjct: 42  YDPQDLSSEERLQALFDSWMLQHGKSYADNALSGDSQAGEKATRYGIFKDNLRFIHGENE 101

Query: 99  QNLSFKLTDNKFADLSNEEFISTYLG-------YNKPYNEPRWPSVQYLGLPASVDWRKE 151
           +N  + L  N FADL+NEEF +   G           + E R+ SVQ   LP S+DWR++
Sbjct: 102 KNQGYFLGLNAFADLTNEEFRAQRHGGRFDRSRERTSHEEFRYGSVQLKDLPDSIDWREK 161

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAV  VKDQG CGSCWAFSAVAA+EG+NKL TG+LVSLSEQELVDCD   E++GCNGG M
Sbjct: 162 GAVVGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLSEQELVDCD-KGEDEGCNGGLM 220

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------- 260
           + AF F+ K GG+ TE DYPY+G   RC   K     VTI GYE +P             
Sbjct: 221 DYAFGFVIKNGGLDTEADYPYKGYGTRCDRSKMNAKVVTIDGYEDVPVNDETALLKAVAH 280

Query: 261 -----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGE 309
                       + Q Y  G+F   CG  L+HGVT VGYG++ G+ YW++KNSWG++WGE
Sbjct: 281 QPVSVAIDAGGSSMQFYRSGIFTGRCGTDLDHGVTNVGYGKEDGKAYWIIKNSWGSNWGE 340

Query: 310 AGYIRMARNSPSSNIGICGILMQASYPVK 338
            GY++MARN+  +  G+CGI M+ASYP K
Sbjct: 341 KGYVKMARNTGLA-AGLCGINMEASYPTK 368


>gi|310656789|gb|ADP02218.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 341

 Score =  283 bits (724), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 190/311 (61%), Gaps = 30/311 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNE 116
           +M ER E W+ +++R Y    E  +RF ++ +NV +I+  N++N  F L  N+F DL+N+
Sbjct: 32  AMVERHEQWMAKFNRVYKDGTEKAQRFEVFKANVAFIESFNAENRKFWLGVNQFTDLTND 91

Query: 117 EFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EF +T        +  R P+      V    LP +VDWR +G VTP+KDQGQCG CWAFS
Sbjct: 92  EFRATKTNKGLKMSGGRAPTGFKYSNVSIDALPTAVDWRTKGVVTPIKDQGQCGCCWAFS 151

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AV A EGI KL TGKL+SLSEQELVDCDV+  +QGC GG M+ AF+FI K GG+TTE +Y
Sbjct: 152 AVVATEGIVKLSTGKLISLSEQELVDCDVHGVDQGCEGGEMDDAFKFIIKNGGLTTEANY 211

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY  ++ +C+T    +   TI GYE +PA                         FQ YS 
Sbjct: 212 PYTAQDGQCKTSIASNSVATIKGYEDVPANDESSLMKAVANQPVSVAVDGGDVIFQHYSG 271

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GV    CG  L+HG+  +GYG    G KYWL+KNSWGT+WGE+GY+RM ++  S   G+C
Sbjct: 272 GVMTGSCGTDLDHGIAAIGYGMTSDGTKYWLLKNSWGTTWGESGYLRMEKD-ISDKSGMC 330

Query: 328 GILMQASYPVK 338
           G+ MQ SYP +
Sbjct: 331 GLAMQPSYPTE 341


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 195/307 (63%), Gaps = 33/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E+WL ++ + Y +  E ++RF I+  N+++ID  N+++ ++K+  N+FADL+N+E+ S 
Sbjct: 46  YESWLVKHGKSYNAIGEKEKRFQIFKDNLRFIDEHNAESRTYKVGLNRFADLTNDEYRSM 105

Query: 122 YLG--------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           YLG         +      R+  V    LP SVDWR++GAV  VKDQG CGSCWAFS +A
Sbjct: 106 YLGARTGSRRRLSTQKRSDRYVPVAGESLPDSVDWREKGAVVGVKDQGSCGSCWAFSTIA 165

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AFEFI K GG+ TE+DYPY 
Sbjct: 166 AVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYN 224

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
            ++ RC   +     VTI  YE +P                         AFQ Y  GVF
Sbjct: 225 ARDGRCDQYRKNAKVVTIDDYEDVPVNNEQALQKAVANQPVSVAIEASGMAFQFYESGVF 284

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGVT VGYG ++   YW+VKNSWG+SWGE+GYIRM RN+ ++  G CGI +
Sbjct: 285 TGNCGTALDHGVTAVGYGTENSVDYWIVKNSWGSSWGESGYIRMERNTGAT--GKCGIAV 342

Query: 332 QASYPVK 338
           + SYP+K
Sbjct: 343 EPSYPIK 349


>gi|356515036|ref|XP_003526207.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 336

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 28/312 (8%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNK 109
           +K    SM ER E W+ +Y + Y    E  +RF I+  NV++I+  N+  N  +KL  N 
Sbjct: 27  RKLHETSMRERHEQWMTEYGKVYKDAAEKDKRFQIFKDNVEFIESFNADGNKPYKLGVNH 86

Query: 110 FADLSNEEFISTYLGYNKP--YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
            ADL+ EEF ++  G+ +P  ++   +       +PA++DWR +GAVTP+KDQGQCGSCW
Sbjct: 87  LADLTVEEFKASRNGFKRPHEFSTTTFKYENVTAIPAAIDWRTKGAVTPIKDQGQCGSCW 146

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS +AA EGI+++ TGKLVSLSEQELVDCD    +QGC GGYME  FEFI K GG+T+E
Sbjct: 147 AFSTIAATEGIHQITTGKLVSLSEQELVDCDTKGVDQGCEGGYMEDGFEFIIKNGGITSE 206

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY+  + +C  +K       I GYE +P                          F  
Sbjct: 207 TNYPYKAVDGKC--NKATSPVAQIKGYEKVPPNSETALQKAVANQPVSVSIDADGAGFMF 264

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           YS G+++  CG +L+HGVT VGYG  +G  YW+VKNSWGT WGE GY+RM R   + + G
Sbjct: 265 YSSGIYNGECGTELDHGVTAVGYGTANGTDYWIVKNSWGTQWGEKGYVRMQRGIAAKH-G 323

Query: 326 ICGILMQASYPV 337
           +CGI + +SYP 
Sbjct: 324 LCGIALDSSYPT 335


>gi|356517350|ref|XP_003527350.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
 gi|356577765|ref|XP_003556993.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 152/337 (45%), Positives = 200/337 (59%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL L + LG  A   +    +     SM ER E W+ +Y + Y   +E ++RF ++  N
Sbjct: 10  ISLALFFCLGFLAFQVA---SRTLQDASMYERHEQWMARYGKVYKDPEEKEKRFRVFKEN 66

Query: 90  VQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLP 143
           V YI+ + N+ N  +KL  N+FADL++EEFI     +N         +  +       LP
Sbjct: 67  VNYIEAFNNAANKPYKLGINQFADLTSEEFIVPRNRFNGHTRSSNTRTTTFKYENVTVLP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
            S+DWR++GAVTP+K+QG CG CWAFSA+AA EGI+K+ TGKLVSLSEQE+VDCD    +
Sbjct: 127 DSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSEQEVVDCDTKGTD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----- 258
            GC GGYM+ AF+FI +  G+ TE  YPY+G + +C   +   HA TITGYE +P     
Sbjct: 187 HGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGKCNIKEEAVHAATITGYEDVPINNEK 246

Query: 259 -----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVK 300
                            +   FQ Y  G+F   CG +L+HGVT VGYGE++ G KYWLVK
Sbjct: 247 ALQKAVANQPVSVAIDASGADFQFYKSGIFTGSCGTELDHGVTAVGYGENNEGTKYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYI M R   +   GICGI M ASYP 
Sbjct: 307 NSWGTEWGEEGYIMMQRGVKAVE-GICGIAMMASYPT 342


>gi|358348957|ref|XP_003638507.1| Cysteine proteinase [Medicago truncatula]
 gi|355504442|gb|AES85645.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 192/315 (60%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W   ++    + +E Q+RF ++ SNV ++   N  +  +KL  NKFAD++N
Sbjct: 34  ESLWDLYERWRSHHTVSR-NLNEKQKRFNVFKSNVMHVHNTNKMDKPYKLKLNKFADMTN 92

Query: 116 EEFISTYLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF +TY G    ++      PR         +   PASVDWRK+GAVT VKDQGQCGSC
Sbjct: 93  HEFKTTYAGSKVNHHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAVTDVKDQGQCGSC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN++KT +LV LSEQEL+DCD N ENQGCNGG ME AFE+I + GG+TT
Sbjct: 153 WAFSTVVAVEGINQIKTNRLVPLSEQELIDCD-NQENQGCNGGLMEYAFEYIKQKGGITT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   +  C   K    AV+I G+E +PA                         FQ
Sbjct: 212 ESYYPYTANDGSCDATKENVPAVSIDGHETVPANDEDALLKAVANQPVSVAIDAGGSDFQ 271

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG +LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S+ 
Sbjct: 272 FYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGEQGYIRMKRNV-SNK 330

Query: 324 IGICGILMQASYPVK 338
            G+CGI M+ASYPVK
Sbjct: 331 EGLCGIAMEASYPVK 345


>gi|242072572|ref|XP_002446222.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
 gi|241937405|gb|EES10550.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
          Length = 340

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 196/315 (62%), Gaps = 33/315 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           D  +M  R E W+ QY+R Y    E  +RF ++ +NV++I+  N+  N  F L  N+FAD
Sbjct: 29  DDSAMVARHEQWMAQYNRVYKDATEKAQRFEVFKANVKFIESFNAGGNRKFWLGVNQFAD 88

Query: 113 LSNEEFISTYL--GYN-KPYNEP---RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           L+N+EF +T    G+   P   P   R+ +V    LPAS+DWR +GAVTP+KDQGQCG C
Sbjct: 89  LTNDEFRATKTNKGFKPSPVKVPTGFRYENVSVDALPASIDWRTKGAVTPIKDQGQCGCC 148

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA EGI K+ T KL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TT
Sbjct: 149 WAFSAVAATEGIVKISTDKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTT 208

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   + +C++    + A  I G+E +PA                         FQ
Sbjct: 209 ESSYPYTATDGKCKSG--TNSAANIKGFEDVPANDEAALMKAVANQPVSVAVDGGDMTFQ 266

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           LYS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S  
Sbjct: 267 LYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGENGYLRMEKD-ISDK 325

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M+ SYP +
Sbjct: 326 RGMCGLAMEPSYPTE 340


>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa]
 gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 153/342 (44%), Positives = 204/342 (59%), Gaps = 30/342 (8%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M  +     +FL ++L + A A         + + M +R E W+ Q+ R YG   E ++R
Sbjct: 1   MAAKKCNTRIFLPFLLILAAWATKIACRPLDEQEYMLKRHEEWMAQHGRVYGDMKEKEKR 60

Query: 83  FGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG 141
           + I+  N++ I+ + N  +  +KL  NKFADL+NEEF + Y GY +  ++    S +Y  
Sbjct: 61  YLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFRAMYHGYKRQSSKLMSSSFRYEN 120

Query: 142 L---PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
           L   P S+DWR +GAVTPVKDQG CG CWAFS VAA+EGI KL+TG L+SLSEQ+LVDC 
Sbjct: 121 LSDIPTSMDWRNDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDC- 179

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
             + N+GC GG M+ AF++I + GG+T+ED+YPY+G +  C ++K       ITGYE +P
Sbjct: 180 -TAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVP 238

Query: 259 ARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEK 295
                                     FQ Y  GVF+  CG Q NH VT +GYG D  G  
Sbjct: 239 QNNENALLQAVAKQPVSVGVDGGGNDFQFYKSGVFNGDCGTQQNHAVTAIGYGTDIDGTD 298

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YWLVKNSWGTSWGE GY+RM R   SS  G+CG+ M ASYP 
Sbjct: 299 YWLVKNSWGTSWGENGYMRMRRGIGSSE-GLCGVAMDASYPT 339


>gi|242071345|ref|XP_002450949.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
 gi|241936792|gb|EES09937.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
          Length = 371

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 203/360 (56%), Gaps = 50/360 (13%)

Query: 24  MLRNAVLSL--FLLWVLGIPAGAWSEGYP----QKYDPQSMEERFENWLKQY--SREYG- 74
           MLR  VL+     L VL  PA A   G P         +S+   +E W   Y  SR  G 
Sbjct: 1   MLRCLVLAAVSLALLVLAPPARA---GIPFTEKDLASEESLRALYEQWRSHYMVSRPAGL 57

Query: 75  -SEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
             +D+  R F ++  NV+YI   N +  SF+L  NKFAD++ +EF   Y   ++  +   
Sbjct: 58  QEQDDKARWFNVFKENVRYIHEANKKGRSFRLALNKFADMTTDEFRRAYAAGSRTRHHRA 117

Query: 134 WPS------------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
             S             Q   LP +VDWR+ GAVT +KDQGQCGSCWAFS +AAVEGINK+
Sbjct: 118 LSSGIRRHGDGSFMYAQAGNLPLAVDWRQRGAVTGIKDQGQCGSCWAFSTIAAVEGINKI 177

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
           +TGKLVSLSEQELVDCD + +NQGCNGG M+ AF++I + GG+TTE +YPY  +   C  
Sbjct: 178 RTGKLVSLSEQELVDCD-DVDNQGCNGGLMDYAFQYIKRNGGITTESNYPYLAEQRSCNK 236

Query: 242 DKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQL 279
            K + H VTI GYE +PA                         FQ YS GVF   CG +L
Sbjct: 237 AKERSHDVTIDGYEDVPANNEDALQKAVANQPVSIAIEASGQDFQFYSEGVFTGSCGTEL 296

Query: 280 NHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R    S  G+CGI M+ SYP K
Sbjct: 297 DHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGISDSQ-GLCGIAMEPSYPTK 355


>gi|357465603|ref|XP_003603086.1| Cysteine proteinase [Medicago truncatula]
 gi|355492134|gb|AES73337.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/356 (44%), Positives = 214/356 (60%), Gaps = 41/356 (11%)

Query: 23  MMLRNAVLSLFL-LWVLGIPAGAWSEGYPQKYDPQSMEER---FENWLKQYSREYGSED- 77
           M++   V +LF   + L +   ++ + +  K   +S +E    +E W  ++ +   + D 
Sbjct: 10  MLVILIVFTLFTATFALDMSIISYDKTHSDKSSRRSDKEVKNIYEEWRVKHGKLNNNIDG 69

Query: 78  -EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGY----------- 125
            E  +RF I+  N+++ID  N++N ++K+  N+FADLSNEE+ S YLG            
Sbjct: 70  SEKDKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGMMMAR 129

Query: 126 NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK 185
            K  +    PSV    LP SVDWR +GAV  VKDQG CGSCWAFS +AAVEGINK+ TG+
Sbjct: 130 TKTRSNRYAPSVGD-KLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVEGINKIVTGE 188

Query: 186 LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK 245
           LVSLSEQELVDCD  + N GC+GG ME AFEFI   GG+ +++DYPYRG + +C   K  
Sbjct: 189 LVSLSEQELVDCD-RTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGKCDQYKKN 247

Query: 246 HHAVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGV 283
              V+I  YE +PA                         FQLY  G+F   CG  L+HGV
Sbjct: 248 ARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGREFQLYVSGIFTGKCGTALDHGV 307

Query: 284 TVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           T VGYG ++G  YW+V+NSWG SWGE+GY+RM RN  +S  G CGI+MQ+SYP+K+
Sbjct: 308 TAVGYGTENGVDYWIVRNSWGKSWGESGYVRMERNLAASVAGKCGIVMQSSYPIKK 363


>gi|388519351|gb|AFK47737.1| unknown [Medicago truncatula]
          Length = 359

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/309 (48%), Positives = 185/309 (59%), Gaps = 33/309 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y    E  +RF I+  N+ +ID  N+QN ++K+  NKFAD +NEE+ + 
Sbjct: 35  YEEWLVKHHKVYNGLGEKDQRFEIFKDNLGFIDEHNAQNYTYKVGLNKFADTTNEEYRNM 94

Query: 122 YLGYN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           YLG            K     R+       LP  VDWR +GAV  +KDQG CGSCWAFS 
Sbjct: 95  YLGTKNDAKRNVMKIKITTGHRYAFNSGDRLPVHVDWRSKGAVAHIKDQGSCGSCWAFST 154

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +A VE INK+ TGKLVSLSEQELVDCD  + N+GCNGG M+ AFEFI + GG+ TE DYP
Sbjct: 155 IATVEAINKIVTGKLVSLSEQELVDCD-RAFNEGCNGGLMDYAFEFIVENGGIDTEQDYP 213

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y+G   RC   +     V+I GYE +PA                        A QLY  G
Sbjct: 214 YKGFEGRCDPTRKNAKVVSIDGYEDVPAYNENALKKAVFHQPVSVAIEAGGRALQLYQSG 273

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           VF   CG  L+HGV VVGYG ++G  YWLV+NSWGT+WGE GY ++ RN    N G CGI
Sbjct: 274 VFTGRCGTNLDHGVVVVGYGFENGVDYWLVRNSWGTNWGEDGYFKLERNVKKINTGKCGI 333

Query: 330 LMQASYPVK 338
            MQASYPVK
Sbjct: 334 AMQASYPVK 342


>gi|357160591|ref|XP_003578813.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/339 (44%), Positives = 195/339 (57%), Gaps = 39/339 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A+L     +  G+ A        +  D  SM  R E+W+ QY R Y    E  R+F ++ 
Sbjct: 10  AILGCLCFFASGLAA-------RELNDDLSMVARHESWMSQYGRSYKDAAEKDRKFEVFK 62

Query: 88  SNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR------WPSVQYLG 141
           +N  +ID  N++N  F L  N+FAD++NEEF  T        N+ R      + +V    
Sbjct: 63  ANAAFIDSFNAKNHKFWLGINQFADITNEEFKVTKTNKGFISNKVRASTGFSYENVSIDA 122

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LPA++DWR +GAVTPVKDQGQCG CWAFSAVAA EGI KL TGKLVSLSEQELVDCDV+ 
Sbjct: 123 LPATIDWRTKGAVTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHG 182

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
           E+QGC GG M+ AF+FI   GG+T E  YPY  ++ +C++      A TI  YE +PA  
Sbjct: 183 EDQGCEGGLMDDAFKFIITNGGLTQESSYPYDAEDGKCKSG--SKSAGTIKSYEDVPANN 240

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWL 298
                                  FQ YS GV    CG  L+HG+  +GYG    G KYWL
Sbjct: 241 EGALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWL 300

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +KNSWGTSWGE G++RM ++      G+CG+ M+ SYP 
Sbjct: 301 MKNSWGTSWGENGFLRMEKDIADKK-GMCGLAMEPSYPT 338


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 191/318 (60%), Gaps = 34/318 (10%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFAD 112
           Y    + + +E WL ++ + Y   DE ++RF ++  N+ +I   N+QN ++ L  NKFAD
Sbjct: 27  YSENEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFAD 86

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLG----------LPASVDWRKEGAVTPVKDQGQ 162
           ++NEE+ + YLG  +   + R    Q  G          LP  VDWR +GAV P+KDQG 
Sbjct: 87  ITNEEYRAMYLG-TRTDAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGN 145

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS VAAVEGIN + TG+ VSLSEQELVDCD    ++GCNGG M+ AF+FI + G
Sbjct: 146 CGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCD-REYDEGCNGGLMDYAFQFIIQNG 204

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+ TE+DYPY+G +  C   K K   V I GYE +P+                       
Sbjct: 205 GIDTEEDYPYQGIDGTCDQTKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASG 264

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            A QLY  GVF   CG  L+HGV VVGYG ++G  YWLV+NSWGT WGE GY +M RN  
Sbjct: 265 RALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYWLVRNSWGTGWGEDGYFKMERNVR 324

Query: 321 SSNIGICGILMQASYPVK 338
           S++ G CGI M  SYPVK
Sbjct: 325 STSEGKCGIAMDCSYPVK 342


>gi|356543038|ref|XP_003539970.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/338 (46%), Positives = 207/338 (61%), Gaps = 35/338 (10%)

Query: 30  LSLFLLWVLGIPAGAWS-EGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +SL LL+ LG     W+ +   +     SM ER E W+ +Y++ Y   +E ++RF I+  
Sbjct: 10  ISLALLFCLGF----WAFQVTSRTLQDASMYERHEEWMARYAKVYKDPEEREKRFKIFKE 65

Query: 89  NVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPY--NEPRWPSVQY---LGL 142
           NV YI+ + N+ N  +KL  N+FADL+NEEFI+    +      +  R  + +Y     L
Sbjct: 66  NVNYIEAFNNAANKPYKLGINQFADLTNEEFIAPRNRFKGHMCSSITRTTTFKYENVTAL 125

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P++VDWR++GAVTP+KDQGQCG CWAFSAVAA EGI+ L +GKL+SLSEQE+VDCD   E
Sbjct: 126 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQEVVDCDTKGE 185

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           +QGC GG+M+ AF+FI +  G+ TE +YPY+  + +C  ++  +HA TITGYE +P    
Sbjct: 186 DQGCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGKCNANEAANHAATITGYEDVPVNNE 245

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLV 299
                                 FQ Y  GVF   CG QL+HGVT VGYG    G +YWLV
Sbjct: 246 KALQKAVANQPVSVAIDASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSADGTQYWLV 305

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GYI M R   +   G+CGI M ASYP 
Sbjct: 306 KNSWGTEWGEEGYIMMQRGVKAQE-GLCGIAMMASYPT 342


>gi|38345906|emb|CAE04498.2| OSJNBb0059K02.8 [Oryza sativa Japonica Group]
          Length = 458

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 202/322 (62%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           Q   GSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QEVAGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIE 265

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 266 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 325

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 326 NIKASS-GKCGIAVEPSYPLKK 346


>gi|356554921|ref|XP_003545789.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 439

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/365 (44%), Positives = 214/365 (58%), Gaps = 35/365 (9%)

Query: 6   FIAIYT-NLHLKIAI---DMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER 61
           F+AI T N H+   I   D  M+ +N    + L  +L     A+        D  SM ER
Sbjct: 76  FLAISTHNSHVLNYIFKRDSTMVAKNHFYHISLAMLLCTAFLAFQVTCCTLQDA-SMYER 134

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNEEFIS 120
            E W+ ++ + Y    E ++RF I++ NV Y++ + N+ N  +KL  N+F DL+N+EFI+
Sbjct: 135 HEQWMTRHGKVYKDPREREKRFRIFNENVNYVEAFNNAANKPYKLGINQFXDLTNQEFIA 194

Query: 121 TYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
               +         R  + +Y     +P++VDWR+ GAVTPVKDQGQCG CWAFSAVAA 
Sbjct: 195 PRNRFKGHMCSSIIRTTTFKYENVTTVPSTVDWRQNGAVTPVKDQGQCGCCWAFSAVAAT 254

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGI+ L  GKL+SLSEQELVDCD    +QGC GG M+ A++FI +  G+ TE +YPY+G 
Sbjct: 255 EGIHALSGGKLISLSEQELVDCDTKGVDQGCEGGLMDDAYKFIIQNHGLNTEANYPYKGV 314

Query: 236 NDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDE 273
           + +C  ++  +HA TITGYE +PA                         FQ Y  G F  
Sbjct: 315 DGKCNANEAANHAATITGYEDVPANNEKALQKAVANQPVSVAIDASSSDFQFYKSGAFTG 374

Query: 274 YCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
            CG +L+HGVT VGYG  DHG KYWLVKNSWGT WGE GYIRM R   S   G+CGI MQ
Sbjct: 375 SCGTELDHGVTAVGYGVSDHGTKYWLVKNSWGTEWGEEGYIRMQRGVDSEE-GVCGIAMQ 433

Query: 333 ASYPV 337
           ASYP 
Sbjct: 434 ASYPT 438


>gi|356517348|ref|XP_003527349.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/337 (45%), Positives = 198/337 (58%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL LL+  G  A   +    +     SM ER E W+ +Y++ Y    E +RRF I+  N
Sbjct: 10  ISLALLFCSGFLAFQVT---CRTLQDASMYERHEEWMGRYAKVYKDPQERERRFKIFKEN 66

Query: 90  VQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LGLP 143
           V YI+ + N+ N  + L  N+FADL+NEEFI+    +         R  + +Y     +P
Sbjct: 67  VNYIEAFNNAANKPYTLGINQFADLTNEEFIAPRNRFKGHMCSSITRTTTFKYENVTAIP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWR++GAVTP+KDQGQCG CWAFSAVAA EGI+ L  GKL+SLSEQE+VDCD   E+
Sbjct: 127 STVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGED 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG+M+ AF+FI +  G+  E +YPY+  + +C      +H  TITGYE +P     
Sbjct: 187 QGCAGGFMDGAFKFIIQNHGLNNEPNYPYKAVDGKCNAKAAANHVATITGYEDVPVNNEK 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG    G +YWLVK
Sbjct: 247 ALQKAVANQPVSVAIDASGSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYIRM R   +   G+CGI M ASYP 
Sbjct: 307 NSWGTEWGEEGYIRMQRGVKAEE-GLCGIAMMASYPT 342


>gi|413944253|gb|AFW76902.1| hypothetical protein ZEAMMB73_056195 [Zea mays]
          Length = 340

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/315 (46%), Positives = 193/315 (61%), Gaps = 33/315 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           +  +M  R E W+ QYSR Y    E  RRF ++ +NV++I+  N+  N  F L  N+FAD
Sbjct: 29  EDSAMVARHEQWMAQYSRVYKDAAEKARRFEVFKANVKFIESFNTGGNRKFWLGINQFAD 88

Query: 113 LSNEEFISTYL------GYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           L+N+EF +T          +K     R+ +V    +PA++DWR  GAVTP+KDQGQCG C
Sbjct: 89  LTNDEFRTTKTNKGFKPSLDKVSTGFRYENVSVDAIPATIDWRTNGAVTPIKDQGQCGCC 148

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA EGI K+ TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TT
Sbjct: 149 WAFSAVAATEGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTT 208

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E +YPY   + +C++    + A  I GYE +P                          FQ
Sbjct: 209 ESNYPYTAADGKCKSG--SNSAANIKGYEDVPTNDEAALMKAVANQPVSVAVDGGDMTFQ 266

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S  
Sbjct: 267 FYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRMEKD-ISDK 325

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M+ SYP +
Sbjct: 326 KGMCGLAMEPSYPTE 340


>gi|302143415|emb|CBI21976.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/336 (46%), Positives = 195/336 (58%), Gaps = 52/336 (15%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY R Y   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARNLHEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           ++DWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TIDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GCNG                    +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCNGA-------------------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 226

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                             + FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 227 LQKAVVHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 286

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 287 SWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 321


>gi|356577763|ref|XP_003556992.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/310 (47%), Positives = 188/310 (60%), Gaps = 30/310 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSN 115
           SM ER E W+ +Y++ Y    E +RRF I+  NV YI+ + N+ N  + L  N+FADL+N
Sbjct: 34  SMYERHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTN 93

Query: 116 EEFISTYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EEFI+    +         R  + +Y     +P++VDWR++GAVTP+KDQGQCG CWAFS
Sbjct: 94  EEFIAPRNRFKGHMCSSITRTTTFKYENVTAIPSTVDWRQKGAVTPIKDQGQCGCCWAFS 153

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI+ L  GKL+SLSEQE+VDCD   E+QGC GG+M+ AF+FI +  G+  E +Y
Sbjct: 154 AVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNNEPNY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY+  + +C      +H  TITGYE +P                          FQ Y  
Sbjct: 214 PYKAVDGKCNAKAAANHVATITGYEDVPVNNEKALQKAVANQPVSVAIDASGSDFQFYQS 273

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGVT VGYG    G +YWLVKNSWGT WGE GYIRM R   +   G+C
Sbjct: 274 GVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGYIRMQRGVKAEE-GLC 332

Query: 328 GILMQASYPV 337
           GI M ASYP 
Sbjct: 333 GIAMMASYPT 342


>gi|302764466|ref|XP_002965654.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
 gi|300166468|gb|EFJ33074.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
          Length = 345

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/308 (48%), Positives = 197/308 (63%), Gaps = 39/308 (12%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           ++ W++++ + Y S  E+++RF I+  NV YI+  N++ N S  L  NKFADL+N EF  
Sbjct: 38  YQKWIQEHGKAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSLGLNKFADLTNSEFRG 97

Query: 121 TYLGYNK---PYNEPRWPSVQYLGLPA----SVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            Y+G  +   P++E     V  + L A    SVDWRK+G VT +KDQG CGSCWAFSAVA
Sbjct: 98  LYVGRLQRPAPFHE-----VGDIALVADTATSVDWRKKGGVTEIKDQGDCGSCWAFSAVA 152

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+  L TG LVSLSEQELVDCD  + NQGC+GG M+ AF+++ + GG+T++ +YPYR
Sbjct: 153 AVEGLTFLSTGTLVSLSEQELVDCDT-TVNQGCDGGIMDYAFQYMIRNGGITSQSNYPYR 211

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVF 271
                C  DK K+HA TI G++AIP +                        FQLYS GVF
Sbjct: 212 ALRGACDKDKVKYHAATINGFQAIPPQSEELLLRAVANQPVSVAIEAGGQDFQLYSSGVF 271

Query: 272 DEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
              CG  L+HGV +VGYG D  G +YWLVKNSWG+ WGE+GY+RM R  P +  G+CGI 
Sbjct: 272 TGECGSNLDHGVAIVGYGTDAGGRQYWLVKNSWGSGWGESGYVRMERQGPGA--GVCGIN 329

Query: 331 MQASYPVK 338
           + ASYP K
Sbjct: 330 LDASYPTK 337


>gi|359359066|gb|AEV40973.1| putative oryzain beta chain precursor [Oryza punctata]
          Length = 461

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 142/307 (46%), Positives = 193/307 (62%), Gaps = 32/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEF 118
           ++ WL +  R Y +  E +RRF ++  N++++D  N+   ++  F+L  N+FADL+N+EF
Sbjct: 49  YDLWLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLTNDEF 108

Query: 119 ISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            ST+LG  K     R    +Y       LP SVDWR++GAV PVK+QGQCGSCWAFSAV+
Sbjct: 109 RSTFLGA-KVVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVS 167

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
            VE IN+L TG++++LSEQELV+C  N +N GCNGG M+ AF+FI K GG+ TEDDYPY+
Sbjct: 168 TVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYK 227

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
             + +C  ++     V+I G+E +P                          FQLY  GVF
Sbjct: 228 AVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVF 287

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV  VGYG D+G+ YW+V+NSWG  WGE+GY+RM RN  ++  G CGI M
Sbjct: 288 SGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERN-INATTGKCGIAM 346

Query: 332 QASYPVK 338
            ASYP K
Sbjct: 347 MASYPTK 353


>gi|356515048|ref|XP_003526213.1| PREDICTED: vignain-like [Glycine max]
          Length = 350

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 154/344 (44%), Positives = 200/344 (58%), Gaps = 35/344 (10%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M  +  +L+L LL  +       S+   +     SM ER E W+K+Y + Y    E Q+R
Sbjct: 4   MGKKQHILALVLLLSI-----CTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKR 58

Query: 83  FGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--QY 139
             I+  NV++I+  N+  N  +KL+ N  AD +NEEF++++ GY    +  + P      
Sbjct: 59  LLIFKDNVEFIESFNAAGNKPYKLSINHLADQTNEEFVASHNGYKYKGSHSQTPFKYGNV 118

Query: 140 LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
             +P +VDWR+ GAVT VKDQGQCGSCWAFS VAA EGI ++ TG L+SLSEQELVDCD 
Sbjct: 119 TDIPTAVDWRQNGAVTAVKDQGQCGSCWAFSTVAATEGIYQISTGMLMSLSEQELVDCD- 177

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA 259
            S + GC+GG ME  FEFI K GG+++E +YPY   +  C   K    A  I GYE +PA
Sbjct: 178 -SVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGTCDASKEASPAAQIKGYETVPA 236

Query: 260 R----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG--EDHGEK 295
                                    FQ YS GVF   CG QL+HGVTVVGYG  +D   +
Sbjct: 237 NSEEALQQAVANQPVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTDDGTHE 296

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           YW+VKNSWGT WGE GYIRM R   +   G+CGI M ASYP+ +
Sbjct: 297 YWIVKNSWGTQWGEEGYIRMQRGIDAQE-GLCGIAMDASYPMGK 339


>gi|21666724|gb|AAM73806.1|AF448505_1 cysteine proteinase [Brassica napus]
 gi|21666726|gb|AAM73807.1|AF448506_1 cysteine proteinase [Brassica napus]
          Length = 343

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/318 (45%), Positives = 193/318 (60%), Gaps = 38/318 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFA 111
           D  +M++R   W+ ++ R Y   +E   R+ ++  NV+ I+ +N     L+FKL  N+FA
Sbjct: 29  DEVTMQKRHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFA 88

Query: 112 DLSNEEFISTYLGY---------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           DL+NEEF S Y GY          KP    R+  V    LP SVDWRK+GAVTP+KDQG 
Sbjct: 89  DLTNEEFRSMYTGYKGNSVLSSRTKP-TSFRYQHVSSDALPISVDWRKKGAVTPIKDQGS 147

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFSAVAA+EG+ ++K GKL+SLSEQELVDCD N +  GC GGYM  AF +    G
Sbjct: 148 CGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDD--GCMGGYMNSAFNYTMTTG 205

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+T+E +YPY+  +  C  +KTK  A +I G+E +PA                       
Sbjct: 206 GLTSESNYPYKSTDGTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGG 265

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF   C   L+HGV VVGYG+  +G KYW++KNSWG  WGE GY+R+ +++
Sbjct: 266 TGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGERGYMRIKKDT 325

Query: 320 PSSNIGICGILMQASYPV 337
            + + G CG+ M ASYP 
Sbjct: 326 KAKH-GQCGLAMNASYPT 342


>gi|224076968|ref|XP_002305072.1| predicted protein [Populus trichocarpa]
 gi|222848036|gb|EEE85583.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/307 (47%), Positives = 192/307 (62%), Gaps = 30/307 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNE 116
           M +R E W+ Q+ R YG   E ++R+ I+  N++ I+ + N  +  +KL  NKFADL+NE
Sbjct: 1   MLKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNE 60

Query: 117 EFISTYLGYNKPYNEPRWPSVQYLGL---PASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EF + Y GY +  ++    S +Y  L   P S+DWR +GAVTPVKDQG CG CWAFS VA
Sbjct: 61  EFRAMYHGYKRQSSKLMSSSFRYENLSDIPTSMDWRNDGAVTPVKDQGTCGCCWAFSTVA 120

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EGI KL+TG L+SLSEQ+LVDC   + N+GC GG M+ AF++I + GG+T+ED+YPY+
Sbjct: 121 AIEGIIKLQTGNLISLSEQQLVDC--TAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQ 178

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVF 271
           G +  C ++K       ITGYE +P                          F+ Y  GVF
Sbjct: 179 GVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVDGGGNDFRFYKSGVF 238

Query: 272 DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           +  CG  LNHGVT +GYG D  G  YWLVKNSWGTSWGE+GY RM R   +S  G+CG+ 
Sbjct: 239 EGDCGTNLNHGVTAIGYGTDSDGTDYWLVKNSWGTSWGESGYTRMQRGIGASE-GLCGVA 297

Query: 331 MQASYPV 337
           M ASYP 
Sbjct: 298 MDASYPT 304


>gi|445927|prf||1910332A Cys endopeptidase
          Length = 362

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/317 (48%), Positives = 192/317 (60%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+ + +E W   +  SR  G   E  +RF ++ +NV ++   N  +  +KL  NKFAD+
Sbjct: 34  ESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADM 90

Query: 114 SNEEFISTYLG----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G    ++K +   +  S  ++      +PASVDWRK+GAVT VKDQGQCG
Sbjct: 91  TNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCG 150

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS + AVEGIN++KT KLVSLSEQELVDCD   ENQGCNGG ME AFEFI + GG+
Sbjct: 151 SCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGI 209

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+ +   C   K    AV+I G+E +P                          
Sbjct: 210 TTESNYPYKAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSD 269

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S
Sbjct: 270 FQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRN-IS 328

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M ASYP+K
Sbjct: 329 KKEGLCGIAMMASYPIK 345


>gi|225438807|ref|XP_002283263.1| PREDICTED: germination-specific cysteine protease 1-like isoform 1
           [Vitis vinifera]
          Length = 374

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 144/305 (47%), Positives = 188/305 (61%), Gaps = 32/305 (10%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG 124
           W+ ++ + Y    E ++RF I+  N+++ID  N+QN ++K+  N+FADL+NEE+ + YLG
Sbjct: 49  WMAKHGKAYNGLGEKEKRFEIFKDNLKFIDEHNAQNRTYKVGLNRFADLTNEEYRAIYLG 108

Query: 125 --------YNKPYN-EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
                   + K  N  PR+  +    LP SVDWR+ GAV PVKDQ  CGSCWAFS VAAV
Sbjct: 109 TRSDPKRRFAKLKNASPRYAVMPGEVLPESVDWRETGAVNPVKDQRSCGSCWAFSTVAAV 168

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG+L+SLSEQELVDCD   +  GCNGG M+ AF+FI K GG+ TE DYPY G 
Sbjct: 169 EGINQIVTGELISLSEQELVDCDTEYD-MGCNGGLMDYAFDFIIKNGGLDTEKDYPYTGF 227

Query: 236 NDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDE 273
           +  C         V+I GYE +P                         A QLY  G+F  
Sbjct: 228 DGECNLSGKSSKVVSIDGYEDVPPFDEKALQKAVAHQPVSVAVEAGGRALQLYVSGIFTG 287

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            CG  L+HG+  VGYG ++G  YW+V+NSWG+SWGE GYIRM RN   +  G CGI M+A
Sbjct: 288 ECGTALDHGIVAVGYGTENGTDYWIVRNSWGSSWGENGYIRMERNMADAFSGKCGIAMEA 347

Query: 334 SYPVK 338
           SYP+K
Sbjct: 348 SYPIK 352


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 191/318 (60%), Gaps = 34/318 (10%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFAD 112
           Y    + + +E WL ++ + Y   DE ++RF ++  N+ +I   N+QN ++ L  NKFAD
Sbjct: 27  YSENEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFAD 86

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLG----------LPASVDWRKEGAVTPVKDQGQ 162
           ++N+E+ + YLG  +   + R    Q  G          LP  VDWR +GAV P+KDQG 
Sbjct: 87  ITNKEYRAMYLG-TRTDAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGN 145

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS VAAVEGIN + TG+ VSLSEQELVDCD    ++GCNGG M+ AF+FI + G
Sbjct: 146 CGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCD-REYDEGCNGGLMDYAFQFIIQNG 204

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+ TE+DYPY+G +  C   K K   V I GYE +P+                       
Sbjct: 205 GIDTEEDYPYQGIDGTCDETKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASG 264

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            A QLY  GVF   CG  L+HGV VVGYG ++G  YWLV+NSWGT WGE GY +M RN  
Sbjct: 265 RALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYWLVRNSWGTGWGEDGYFKMERNVR 324

Query: 321 SSNIGICGILMQASYPVK 338
           S++ G CGI M  SYPVK
Sbjct: 325 STSEGKCGIAMDCSYPVK 342


>gi|357160569|ref|XP_003578807.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  SM  R E+W+ QY R Y    E   +F ++ +N  +ID  N+ N  F L  N+FAD+
Sbjct: 29  DDLSMVARHESWMLQYGRVYKDAAEKASKFEVFKANAGFIDSFNAGNHKFWLGINQFADI 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF +T        N+ R P+      V +  LPAS+DWR +GAVTPVKDQGQCG CW
Sbjct: 89  TNKEFKATKTNKGFISNKVRAPTGFSYENVSFDALPASIDWRTKGAVTPVKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA EGI KL TGKLVSLSEQELVDCDV+ E+QGC GG M+ AF+FI   GG+T E
Sbjct: 149 AFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIISNGGLTQE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
             YPY  ++ +C++      A TI  YE +PA                         FQ 
Sbjct: 209 SSYPYDAEDGKCKSG--SKSAGTIKSYEDVPANNEGALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV    CG  L+HG+  +GYG    G KYWL+KNSWGTSWGE G++RM ++      
Sbjct: 267 YSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWLMKNSWGTSWGENGFLRMEKDIADKK- 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|356543076|ref|XP_003539989.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 157/345 (45%), Positives = 208/345 (60%), Gaps = 49/345 (14%)

Query: 30  LSLFLLWVLGIPAGAWS-EGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +SL LL+ LG     W+ +   +     SM ER E W+ +Y++ Y   +E ++RF I+  
Sbjct: 10  ISLALLFCLGF----WAFQVTSRTLQDASMYERHEEWMARYAKVYKDPEEREKRFKIFKE 65

Query: 89  NVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE---------PRWPSVQ 138
           NV YI+ + N+ +  +KL  N+FADL+NEEFI+       P N+          R  + +
Sbjct: 66  NVNYIEAFNNAADKPYKLGINQFADLTNEEFIA-------PRNKFKGHMCSSITRTTTFK 118

Query: 139 Y---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
           Y     LP++VDWR++GAVTP+KDQGQCG CWAFSAVAA EGI+ L +GKL+SLSEQE+V
Sbjct: 119 YENVTALPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQEVV 178

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DCD   E+QGC GG+M+ AF+FI +  G+ TE +YPY+  + +C  ++  +HA TITGYE
Sbjct: 179 DCDTKGEDQGCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGKCNANEAANHAATITGYE 238

Query: 256 AIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDH 292
            +P                          FQ Y  GVF   CG QL+HGVT VGYG    
Sbjct: 239 DVPVNNEKALQKAVANQPVSVAIDASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSAD 298

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G +YWLVKNSWGT WGE GYI M R   +   G+CGI M ASYP 
Sbjct: 299 GTQYWLVKNSWGTEWGEEGYIMMQRGVKAQE-GLCGIAMMASYPT 342


>gi|125551397|gb|EAY97106.1| hypothetical protein OsI_19029 [Oryza sativa Indica Group]
          Length = 350

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/312 (47%), Positives = 191/312 (61%), Gaps = 32/312 (10%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSN 115
           +M  R E W+ Q+ R Y    E  RR  ++ +NV +I+  N+   + + L  N+FADL++
Sbjct: 39  AMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTS 98

Query: 116 EEFISTYL---GYNKPYNEPR------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           EEF +T     G++ P N  R      + +V    LPASVDWR +GAVT +KDQGQCG C
Sbjct: 99  EEFKATMTNSKGFSTPNNGVRVSTGFKYENVSADALPASVDWRTKGAVTRIKDQGQCGCC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA+EGI KL TGKL+SLSEQELVDCDV+  +QGC GG ++ AF+FI   GG+T 
Sbjct: 159 WAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTA 218

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------YAFQLY 266
           E +YPY  ++ RC+T      A +I GYE +PA                       FQ Y
Sbjct: 219 EANYPYTAEDGRCKTTAAADVAASIRGYEDVPANDEPSLMKAVAGQPVSVAVDASKFQFY 278

Query: 267 SHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
             GV    CG  L+HGVTV+GYG    G KYWLVKNSWGT+WGEAGY+RM ++      G
Sbjct: 279 GGGVMAGECGTSLDHGVTVIGYGAASDGTKYWLVKNSWGTTWGEAGYLRMEKDIDDKR-G 337

Query: 326 ICGILMQASYPV 337
           +CG+ MQ SYP 
Sbjct: 338 MCGLAMQPSYPT 349


>gi|182375363|gb|ACB87490.1| mucunain [Mucuna pruriens]
          Length = 422

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 146/308 (47%), Positives = 187/308 (60%), Gaps = 32/308 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y +  E  +RF I+  N+++ID  N+ N ++KL  N+FADL+NEE+ + 
Sbjct: 4   YEQWLVKHGKAYNALGEKDKRFDIFKDNLRFIDDHNADNRTYKLGLNRFADLTNEEYRAR 63

Query: 122 YLGY----NKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           YLG     N+ + + +  S +Y       LP SVDWR E AV PVKDQG CGSCWAFS +
Sbjct: 64  YLGTRIDPNRRFVKTKTQSNRYAPRVGDNLPESVDWRNESAVLPVKDQGNCGSCWAFSTI 123

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVEGINK+ TG L+SLSEQELVDCD  S NQGCNGG M+ A+EFI   GG+ +E+DYPY
Sbjct: 124 GAVEGINKIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAYEFIINNGGIDSEEDYPY 182

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           R  +  C   +     VTI  YE +PA                         FQLY  GV
Sbjct: 183 RAVDGTCDQYRKNAKVVTIDSYEDVPANDELALKKAVANQPVSVAIEGGGREFQLYVSGV 242

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F   CG  L+HGV  VGYG   G  YW+V+NSWG SWGE GY+R+ RN   S  G CGI 
Sbjct: 243 FTGRCGTALDHGVVAVGYGSVKGHDYWIVRNSWGASWGEEGYVRLERNLAKSRSGKCGIA 302

Query: 331 MQASYPVK 338
           ++ SYP+K
Sbjct: 303 IEPSYPIK 310


>gi|357167196|ref|XP_003581047.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 338

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 144/310 (46%), Positives = 186/310 (60%), Gaps = 31/310 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           +  R E W+ +Y R Y    E  RR  ++ +NV +I+ +N+ N  F L  N+FAD++ +E
Sbjct: 29  IAARHEQWMARYGRVYSDVAEKARRLEVFKANVGFIESVNAGNHKFWLEANQFADITKDE 88

Query: 118 FISTYLGYNKPY-------NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           F + + GY              R+ +V    LPASVDWR  GAVTPVKDQGQCG CWAFS
Sbjct: 89  FRAMHKGYKMQVIGSKARATGFRYANVSIDDLPASVDWRANGAVTPVKDQGQCGCCWAFS 148

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
            VA++EGI K+ TGKL+SLSEQELVDCDV  +N+GC GG M+ AFEFI   GG+ TE DY
Sbjct: 149 TVASMEGIVKVSTGKLISLSEQELVDCDVGMQNKGCGGGLMDNAFEFIVNNGGLDTEADY 208

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSH 268
           PY G +  C ++K  + A +I GYE +PA                         F+ Y  
Sbjct: 209 PYTGADGTCNSNKESNIAASIKGYEDVPANDEASLQKAVAAQPVSIAVDGGDDLFRFYKG 268

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GV    CG +L+HGV  VGYG    G KYWLVKNSWGTSWGE G+IR+ R+  +   G+C
Sbjct: 269 GVLTGACGTELDHGVAAVGYGVAGDGTKYWLVKNSWGTSWGEDGFIRLERD-VADEAGMC 327

Query: 328 GILMQASYPV 337
           G+ M+ SYP 
Sbjct: 328 GLAMKPSYPT 337


>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 159/358 (44%), Positives = 204/358 (56%), Gaps = 43/358 (12%)

Query: 11  TNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYP--QKYDPQSMEERFENWLKQ 68
           T   L +AI    +L +A+   F +            GY   Q    + + E FE+W+ +
Sbjct: 9   TKFSLLVAISASALLCSALARDFSIV-----------GYTPEQLTSTEKLLELFESWMSE 57

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP 128
           +S+ Y S +E   RF ++  N+ +ID  N++  S+ L  N+FADL++EEF   YLG  KP
Sbjct: 58  HSKVYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117

Query: 129 -YNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
            ++  R PS  +       LP SVDWRK+GAV PVKDQGQCGSCWAFS VAAVEGIN++ 
Sbjct: 118 QFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQIT 177

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TG L SLSEQEL+DCD  + N GCNGG M+ AF++I   GG+  EDDYPY  +   CQ  
Sbjct: 178 TGNLSSLSEQELIDCDT-TFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQ 236

Query: 243 KTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLN 280
           K     VTI+GYE +P                      +   FQ Y  GVF+  CG  L+
Sbjct: 237 KEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGQCGTDLD 296

Query: 281 HGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           HGV  VGYG   G  Y +VKNSWG  WGE G+IRM RN+     G+CGI   ASYP K
Sbjct: 297 HGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPE-GLCGINKMASYPTK 353


>gi|90399361|emb|CAJ86180.1| H0212B02.7 [Oryza sativa Indica Group]
          Length = 470

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 156/334 (46%), Positives = 204/334 (61%), Gaps = 50/334 (14%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKH------------HAVTITGYEAIPAR------- 260
             GG+ TEDDYPY+GK++RC  ++                 VTI  YE +          
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRVSFVFFAPLVFQKNAKVVTIDSYEDVTPNSETSLQK 265

Query: 261 ---------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGT 305
                           AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG 
Sbjct: 266 AVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGK 325

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           SWGE+GY+RM RN  +S+ G CGI ++ SYP+K+
Sbjct: 326 SWGESGYVRMERNIKASS-GKCGIAVEPSYPLKK 358


>gi|57282619|emb|CAE54307.1| cysteine proteinase [Gossypium hirsutum]
          Length = 372

 Score =  280 bits (717), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 199/309 (64%), Gaps = 34/309 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFIS 120
           +++W+ Q+ + Y    E ++RF I+  N+++ID  NS N  ++KL  NKFADL+N+E+ +
Sbjct: 46  YKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYRA 105

Query: 121 TYLGYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            +LG      +   + + PS +Y       LP SV+WR  GAV+ VKDQG CGSCWAFSA
Sbjct: 106 KFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVNWRDHGAVSRVKDQGSCGSCWAFSA 165

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +AAVEGINK+ +G+L+SLSEQELVDCD  S + GCNGG M+ AF+FI   GG+ TE DYP
Sbjct: 166 IAAVEGINKIVSGELISLSEQELVDCD-RSYDAGCNGGLMDYAFQFIIDNGGIDTEKDYP 224

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------YAFQLYSHGV 270
           Y G N++C   K     V+I GYE +P                        AFQLY  GV
Sbjct: 225 YLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKKAVAHQPVSIAIEAGGRAFQLYESGV 284

Query: 271 FDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F+  CG  L+HGV  VGYG +D+G+ YW+V+NSWG +WGE GYIRM RN  ++N G CGI
Sbjct: 285 FNGECGLALDHGVVAVGYGSDDNGQDYWIVRNSWGGNWGENGYIRMERN-INANTGKCGI 343

Query: 330 LMQASYPVK 338
            M+ASYPVK
Sbjct: 344 AMEASYPVK 352


>gi|118158|sp|P12412.1|CYSEP_VIGMU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase; AltName:
           Full=Sulfhydryl-endopeptidase; Short=SH-EP; Contains:
           RecName: Full=Vignain-1; Contains: RecName:
           Full=Vignain-2; Flags: Precursor
 gi|22062|emb|CAA33753.1| sulfhydryl-pre-endopeptidase (AA -20 to 342) [Vigna mungo]
 gi|22066|emb|CAA36181.1| sulfhydryl-endopeptidase [Vigna mungo]
          Length = 362

 Score =  280 bits (717), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 153/317 (48%), Positives = 191/317 (60%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+ + +E W   +  SR  G   E  +RF ++ +NV ++   N  +  +KL  NKFAD+
Sbjct: 34  ESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADM 90

Query: 114 SNEEFISTYLG----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G    ++K +   +  S  ++      +PASVDWRK+GAVT VKDQGQCG
Sbjct: 91  TNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCG 150

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS + AVEGIN++KT KLVSLSEQELVDCD   ENQGCNGG ME AFEFI + GG+
Sbjct: 151 SCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGI 209

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY  +   C   K    AV+I G+E +P                          
Sbjct: 210 TTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSD 269

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S
Sbjct: 270 FQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRN-IS 328

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M ASYP+K
Sbjct: 329 KKEGLCGIAMMASYPIK 345


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/306 (46%), Positives = 194/306 (63%), Gaps = 33/306 (10%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYL 123
           WL ++S+ Y    E ++RF I+ +N+++ID + NS+N ++K+   +FADL+NEE+ + +L
Sbjct: 51  WLAKHSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRTYKVGLTRFADLTNEEYRAKFL 110

Query: 124 GYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           G      +   + + PS +Y       LP S+DWR+ GAV+ +KDQG CGSCWAFS +AA
Sbjct: 111 GTKSDPKRRLMKSKNPSQRYAFKAGDVLPESIDWRQSGAVSAIKDQGSCGSCWAFSTIAA 170

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEG+NK+ TG+L+SLSEQELVDCD  S N GCNGG M+ AF+FI   GG+ T+ DYPY+ 
Sbjct: 171 VEGVNKIVTGELISLSEQELVDCD-RSYNAGCNGGLMDNAFQFIINNGGIDTDKDYPYQA 229

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGVFD 272
            + +C T K K+ AVTI G+E + A                        A Q Y  GVF 
Sbjct: 230 VDGKCDTTKVKNKAVTIDGFEDVMAFDEMALQKAVAHQPVSVAIEASGMALQFYQSGVFT 289

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  L+HGV +VGYG + G  YWLV+NSWG  WGE GYI+M RN   +  G CGI M+
Sbjct: 290 GECGSALDHGVVIVGYGTEDGIDYWLVRNSWGRDWGENGYIKMQRNVVDTFTGKCGIAME 349

Query: 333 ASYPVK 338
           +SYP+K
Sbjct: 350 SSYPIK 355


>gi|357160599|ref|XP_003578815.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 188/313 (60%), Gaps = 32/313 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  SM  R E W+ QY R Y    E  ++F ++ +N ++ID  N++N  F L  N+FADL
Sbjct: 29  DDLSMAARHETWMAQYGRVYKDAAEKAQKFEVFKANARFIDSFNAENHKFWLGINQFADL 88

Query: 114 SNEEFISTYLGYNKPYNEPR------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +NEEF +T        N+ R      + +++   LP S+DWR +GAVTPVKDQGQCG CW
Sbjct: 89  TNEEFKATKTNKGFISNKARVSTGFKYENLKIEALPTSIDWRTKGAVTPVKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA EGI KL TGKLVSLSEQELVDCDV+ E+QGC GG M+ AF+FI   GG+T E
Sbjct: 149 AFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIITNGGLTQE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
             YPY  ++ +C++      A TI  YE +PA                         FQ 
Sbjct: 209 SSYPYDAEDGKCKSG--SKSAGTIKSYEDVPANNEGALMKAVANQPVSVAVDGGDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV    CG  L+HG+  +GYG    G K+WL+KNSWGT+WGE G++RM ++      
Sbjct: 267 YSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKFWLMKNSWGTTWGENGFLRMEKDIADKK- 325

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 326 GMCGLAMEPSYPT 338


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/306 (46%), Positives = 191/306 (62%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEFI 119
           ++ WL +  R Y +  E +RRF ++  N+++ D  N++  +  F+L  N+FADL+NEEF 
Sbjct: 54  YDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFADLTNEEFR 113

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           +T+LG  K     R    +Y       LP SVDWR++GAV PVK+QGQCGSCWAFSAV+ 
Sbjct: 114 ATFLGA-KVVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVST 172

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VE IN+L TG++++LSEQELV+C  N +N GCNGG M+ AF+FI K GG+ TEDDYPY+ 
Sbjct: 173 VESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKA 232

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            + +C  ++     V+I G+E +P                          FQLY  GVF 
Sbjct: 233 VDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFS 292

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  L+HGV  VGYG D+G+ YW+V+NSWG  WGE+GY+RM RN  +   G CGI M 
Sbjct: 293 GRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERN-INVTTGKCGIAMM 351

Query: 333 ASYPVK 338
           ASYP K
Sbjct: 352 ASYPTK 357


>gi|356517426|ref|XP_003527388.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  280 bits (716), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 154/337 (45%), Positives = 201/337 (59%), Gaps = 33/337 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL LL+ +G  A   +    +     SM ER   W+ +Y++ Y    E ++RF I+  N
Sbjct: 10  ISLALLFCMGFLAFQVT---CRTLQDASMYERHAQWMARYAKVYKDPQEREKRFRIFKEN 66

Query: 90  VQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQYLG---LP 143
           V YI+  NS  N S+KL  N+FADL+NEEFI+    +         R  + +Y     +P
Sbjct: 67  VNYIETFNSADNKSYKLDINQFADLTNEEFIAPRNRFKGHMCSSITRTTTFKYENVTVIP 126

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ++VDWR++GAVTP+KDQGQCG CWAFSAVAA EGI+ L  GKL+SLSEQE+VDCD   ++
Sbjct: 127 STVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNAGKLISLSEQEVVDCDTKGQD 186

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
           QGC GG+M+ AF+FI +  G+ TE +YPY+  + +C      +HA TITGYE +P     
Sbjct: 187 QGCAGGFMDGAFKFIIQNHGLNTEPNYPYKAADGKCNAKAAANHAATITGYEDVPVNNEK 246

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVK 300
                                FQ Y  GVF   CG +L+HGVT VGYG    G +YWLVK
Sbjct: 247 ALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVK 306

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWGT WGE GYIRM R   +   G+CGI M ASYP 
Sbjct: 307 NSWGTEWGEEGYIRMQRGVKAEE-GLCGIAMMASYPT 342


>gi|356543112|ref|XP_003540007.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 345

 Score =  280 bits (716), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 188/311 (60%), Gaps = 35/311 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEF 118
           ER ENW+ QY + Y    E ++RF I+ +NV +I+  N+  +  F L+ N+FADL +EEF
Sbjct: 36  ERHENWMAQYGKVYKDAAEKKKRFQIFKNNVHFIESFNTAGDKPFNLSINQFADLHDEEF 95

Query: 119 ISTYLGYNKPY---------NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
            +     NK            E  +   +   L A++DWRK GAVTP+KDQ +CGSCWAF
Sbjct: 96  KALLTNGNKKVRSVVGTATETETSFKYNRVTKLLATMDWRKRGAVTPIKDQRRCGSCWAF 155

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SAVAA+EGI+++ T KLVSLSEQELVDC V  E++GCNGGYME AFEF+ K GG+ +E  
Sbjct: 156 SAVAAIEGIHQITTSKLVSLSEQELVDC-VKGESEGCNGGYMEDAFEFVAKKGGIASESY 214

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------AFQLYS 267
           YPY+GK+  C+  K  H    I GYE +P+                        AFQ YS
Sbjct: 215 YPYKGKDKSCKVKKETHGVSQIKGYEKVPSNSEKALQKAVAHQPVSVYVEAGGNAFQFYS 274

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            G+F   CG   +H +TVVGYG+   G KYWLVKNSWG  WGE GYIRM R+  +   G+
Sbjct: 275 SGIFTGKCGTNTDHAITVVGYGKSRGGTKYWLVKNSWGAGWGEKGYIRMKRDIRAKE-GL 333

Query: 327 CGILMQASYPV 337
           CGI M A YP 
Sbjct: 334 CGIAMNAFYPT 344


>gi|37780043|gb|AAP32194.1| cysteine protease 1 [Trifolium repens]
          Length = 292

 Score =  280 bits (716), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 149/290 (51%), Positives = 186/290 (64%), Gaps = 31/290 (10%)

Query: 78  EWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--R 133
           E ++R  I++ NV YI+  NS   N  +KL+ NKFADL+NEEFI++   +         R
Sbjct: 3   EREKRLRIFNKNVNYIEASNSAVNNKLYKLSINKFADLTNEEFIASRNKFKGHMCSSIIR 62

Query: 134 WPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             + +Y     +P++VDWRK+GAVTPVK+QGQCGSCWAFSAVAA EGI++L TGKLVSLS
Sbjct: 63  TTTFKYENASAIPSTVDWRKKGAVTPVKNQGQCGSCWAFSAVAATEGIHQLSTGKLVSLS 122

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQEL+DCD    +QGC GG M+ AF+FI +  G++TE  YPY G +  C  +K   HAVT
Sbjct: 123 EQELIDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEVQYPYEGVDGTCNANKASIHAVT 182

Query: 251 ITGYEAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGY 288
           ITGYE +PA                         FQ Y+ GVF   CG +L+HGVT VGY
Sbjct: 183 ITGYEDVPANNELALQKAVANQPISVAIDASGSDFQFYNSGVFTGSCGTELDHGVTAVGY 242

Query: 289 G-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  + G KYWLVKNSWG  WGE GYIRM R   ++  G+CGI MQASYP 
Sbjct: 243 GVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIAAAE-GLCGIAMQASYPT 291


>gi|449525012|ref|XP_004169515.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 459

 Score =  280 bits (716), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 155/349 (44%), Positives = 207/349 (59%), Gaps = 36/349 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREY---GSED 77
           M     + +++L     + + A + S   PQ+ D + M   ++ W  ++ + +   G+E 
Sbjct: 1   MGTFQSSPIMALLFFLFIALSAASPSSIIPQRTDDEVMA-LYDQWRAKHGKLHNNLGAEP 59

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR-WPS 136
           E   RF I+  N+++ID IN+QNL ++L  N FADL+NEE+ S YLG        R   S
Sbjct: 60  E--NRFHIFKDNLKFIDEINAQNLPYRLGLNVFADLTNEEYRSRYLGGKFASGSRRNRTS 117

Query: 137 VQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSE 191
            +YL      LP S+DWR +GAV PVKDQG CGSCWAFS VA+VE IN++ TG L++LSE
Sbjct: 118 NRYLPRLGDDLPDSIDWRAKGAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSE 177

Query: 192 QELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTI 251
           QELVDCD  S N+GCNGG M+ AFEFI + GG+ TE+DYPY G +  C   K     V I
Sbjct: 178 QELVDCD-RSYNEGCNGGLMDYAFEFIIENGGLDTEEDYPYYGFDSSCIQYKKNAKVVAI 236

Query: 252 TGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
             YE +P                         +FQLY  G+F   CG  L+HGV VVGYG
Sbjct: 237 DSYEDVPVNNEKALQKAVSKQVVSVAIEGGGRSFQLYQSGIFTGRCGTDLDHGVNVVGYG 296

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            + G  YW+V+NSWG SWGE+GY++M RN  +S  G+CGI M+ SYP K
Sbjct: 297 SEGGVDYWIVRNSWGGSWGESGYVKMQRNI-ASPTGLCGIAMEPSYPTK 344


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 145/318 (45%), Positives = 192/318 (60%), Gaps = 38/318 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFA 111
           D  +M++R   W+ ++ R Y   +E   R+ ++  NV+ I+ +N     L+FKL  N+FA
Sbjct: 30  DEVAMQKRHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFA 89

Query: 112 DLSNEEFISTYLGY---------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           DL+NEEF S Y G+          KP    R+ +V    LP SVDWRK+GAVTP+KDQG 
Sbjct: 90  DLTNEEFRSMYTGFKGNSVLSSRTKP-TSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGL 148

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFSAVAA+EG+ ++K GKL+SLSEQELVDCD N  + GC GG M+ AF +   IG
Sbjct: 149 CGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTN--DGGCMGGLMDTAFNYTITIG 206

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+T+E +YPY+  N  C  +KTK  A +I G+E +PA                       
Sbjct: 207 GLTSESNYPYKSTNGTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGD 266

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF   C   L+HGVT VGYG   +G KYW++KNSWG  WGE GY+R+ ++ 
Sbjct: 267 IGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGERGYMRIKKDI 326

Query: 320 PSSNIGICGILMQASYPV 337
              + G CG+ M ASYP 
Sbjct: 327 KPKH-GQCGLAMNASYPT 343


>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
 gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags:
           Precursor
 gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana]
 gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]
 gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
          Length = 355

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 187/307 (60%), Gaps = 30/307 (9%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E FE+W+ ++S+ Y S +E   RF ++  N+ +ID  N++  S+ L  N+FADL++EEF 
Sbjct: 49  ELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFK 108

Query: 120 STYLGYNKP-YNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             YLG  KP ++  R PS  +       LP SVDWRK+GAV PVKDQGQCGSCWAFS VA
Sbjct: 109 GRYLGLAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVA 168

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF++I   GG+  EDDYPY 
Sbjct: 169 AVEGINQITTGNLSSLSEQELIDCDT-TFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYL 227

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVF 271
            +   CQ  K     VTI+GYE +P                      +   FQ Y  GVF
Sbjct: 228 MEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVF 287

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
           +  CG  L+HGV  VGYG   G  Y +VKNSWG  WGE G+IRM RN+     G+CGI  
Sbjct: 288 NGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPE-GLCGINK 346

Query: 332 QASYPVK 338
            ASYP K
Sbjct: 347 MASYPTK 353


>gi|356542633|ref|XP_003539771.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 341

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 154/340 (45%), Positives = 198/340 (58%), Gaps = 34/340 (10%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           L +  L+LFL++          E   +  +   M ER E W+  + + Y    E ++++ 
Sbjct: 6   LFHCTLALFLIFAF-----CAFEANARTLEDAPMRERHEQWMATHGKVYKHSYEKEQKYQ 60

Query: 85  IYSSNVQYIDYINSQNLS-FKLTDNKFADLSNEEF--ISTYLGY--NKPYNEPRWPSVQY 139
           I+  NVQ I+  N+     +KL  N FADL+NEEF  I+ + G+  +K      +     
Sbjct: 61  IFMENVQRIEAFNNAGXKPYKLGINHFADLTNEEFKAINRFKGHVCSKRTRTTTFRYENV 120

Query: 140 LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
             +PAS+DWR++GAVTP+KDQGQCG CWAFSAVAA EGI KL+TGKL+SLSEQELVDCD 
Sbjct: 121 TAVPASLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLRTGKLISLSEQELVDCDT 180

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA 259
              +QGC GG M+ AF+FI +  G+ TE  YPY G +  C      +HA +I GYE +PA
Sbjct: 181 KGVDQGCEGGLMDDAFKFILQNKGLATEAIYPYEGFDGTCNAKADGNHAGSIKGYEDVPA 240

Query: 260 R----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKY 296
                                  + FQ YS GVF   CG  L+HGVT VGYG  D G KY
Sbjct: 241 NSESALLKAVANQPVSVAIEASGFKFQFYSGGVFTGSCGTNLDHGVTSVGYGVGDDGTKY 300

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           WLVKNSWG  WGE GYIRM R+  +   G+CGI M ASYP
Sbjct: 301 WLVKNSWGVKWGEKGYIRMQRDVAAKE-GLCGIAMLASYP 339


>gi|255538210|ref|XP_002510170.1| cysteine protease, putative [Ricinus communis]
 gi|223550871|gb|EEF52357.1| cysteine protease, putative [Ricinus communis]
          Length = 469

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 193/310 (62%), Gaps = 34/310 (10%)

Query: 62  FENWLKQYSREYGSED---EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           +E WL +  + + + +   E +RRF ++  N+++ID  NS+N S+K+  N+FADL+NEE+
Sbjct: 51  YEEWLVKNGKAHSNNNALGEKERRFQVFKDNLRFIDEHNSENRSYKVGLNRFADLTNEEY 110

Query: 119 ISTYLGYNKPYNEPRWP--SVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            S YLG        R    S +YL      LP SVDWRKEGAV  VKDQG CGSCWAFS 
Sbjct: 111 RSMYLGARSGAKRNRLSRSSNRYLPRVGDSLPDSVDWRKEGAVAEVKDQGSCGSCWAFST 170

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +AAVEGINK+ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI   GG+ +E+DYP
Sbjct: 171 IAAVEGINKIVTGDLISLSEQELVDCD-RSYNEGCNGGLMDYAFQFIINNGGIDSEEDYP 229

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y  ++  C T +     VTI  YE +P                          FQ Y  G
Sbjct: 230 YLARDGTCDTYRKNAKVVTIDNYEDVPVNDEKALQKAVANQPVSVAIEAGGREFQFYQSG 289

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           +F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GYIRM RN  ++  G CGI
Sbjct: 290 IFTGRCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYIRMERNIATA-TGKCGI 348

Query: 330 LMQASYPVKR 339
            ++ SYP+K+
Sbjct: 349 AIEPSYPIKK 358


>gi|414588010|tpg|DAA38581.1| TPA: hypothetical protein ZEAMMB73_156486 [Zea mays]
          Length = 347

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/319 (46%), Positives = 195/319 (61%), Gaps = 40/319 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNK 109
           D  +M  R E W+ Q+ R Y  E +   RF ++ +NV++I+  N+     N  F L  N+
Sbjct: 33  DELAMVARHEQWMVQHGRVYKDETDKAHRFLVFKANVKFIESFNAAAAAGNRKFWLGVNQ 92

Query: 110 FADLSNEEFISTYLGYNKPYNEP--------RWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           FADL+N+EF +T    NK +N          R+ ++    LP +VDWR +GAVTP+KDQG
Sbjct: 93  FADLTNDEFRATKT--NKGFNPNVVKVPTGFRYQNLSIDALPQTVDWRTKGAVTPIKDQG 150

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCG CWAFSAVAA EGI K+ TGKL SLSEQELVDCDV+ E+QGCNGG M+ AF+FI K 
Sbjct: 151 QCGCCWAFSAVAATEGIVKISTGKLTSLSEQELVDCDVHGEDQGCNGGEMDDAFKFIIKN 210

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------- 260
           GG+TTE +YPY  ++ +C++    + A TI GYE +PA                      
Sbjct: 211 GGLTTESNYPYTAQDGQCKSG--SNGAATIKGYEDVPANDEAALMKAVASQPVSVAVDGG 268

Query: 261 -YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              FQ YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE G++RM ++
Sbjct: 269 DMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGFLRMEKD 328

Query: 319 SPSSNIGICGILMQASYPV 337
                 G+CG+ MQ SYP 
Sbjct: 329 IADKK-GMCGLAMQPSYPT 346


>gi|388517427|gb|AFK46775.1| unknown [Medicago truncatula]
          Length = 362

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 151/315 (47%), Positives = 190/315 (60%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W   ++    + +E Q+RF ++ SNV ++   N  +  +KL  NKFAD++N
Sbjct: 34  ESLWDLYERWRSHHTVSR-NLNEKQKRFNVFKSNVMHVHNTNKMDKPYKLKLNKFADMTN 92

Query: 116 EEFISTYLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF +TY G    ++      PR         +   PASVDWRK+GAVT VKDQGQCGSC
Sbjct: 93  HEFKTTYAGTKVNHHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAVTDVKDQGQCGSC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN++KT +LV LSEQEL+DCD N ENQGCNGG ME AFE+I + GGVTT
Sbjct: 153 WAFSTVVAVEGINQIKTNRLVPLSEQELIDCD-NQENQGCNGGLMEYAFEYIKQKGGVTT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   +  C   K     V+I G+E +PA                         FQ
Sbjct: 212 ESYYPYTANDGSCDATKENVPTVSIDGHETVPANDEDALLKAVANQPVSVAIDAGGSDFQ 271

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG +LNHGV +VGYG    G  YW+V+NSWG  WGE G IRM RN  S+ 
Sbjct: 272 FYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGEQGCIRMKRNV-SNK 330

Query: 324 IGICGILMQASYPVK 338
            G+CGI M+ASYPVK
Sbjct: 331 EGLCGIAMEASYPVK 345


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/318 (45%), Positives = 195/318 (61%), Gaps = 32/318 (10%)

Query: 50  PQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNK 109
           PQ+ D ++M   +E WL  + + Y +  E +RRF I+  N++++D  N+   S+++  N+
Sbjct: 36  PQRTDAEAMA-IYEKWLTTHGKAYNAIGEKERRFEIFKDNLRFVDEHNAVAGSYRVGLNR 94

Query: 110 FADLSNEEFISTYLGYNKPYNE-------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           FADL+NEE+ S +LG N    E        R+       LP SVDWR++GAV+PVKDQGQ
Sbjct: 95  FADLTNEEYRSMFLGGNMEMKERSASTKSDRYAFRAGDKLPGSVDWREKGAVSPVKDQGQ 154

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS ++AVEGIN++ TG+L+SLSEQELVDCD  S N GCNGG M+  F+FI   G
Sbjct: 155 CGSCWAFSTISAVEGINQIVTGELISLSEQELVDCD-KSYNMGCNGGLMDYGFQFIINNG 213

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------AR 260
           G+ TE+DYPYR  +  C   +     V+I GYE +P                        
Sbjct: 214 GIDTEEDYPYRAVDGTCDQFRKNARVVSINGYEDVPEDDENSLKKAVANQPVSVAIEAGG 273

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            AFQLY  GVF  +CG  L+HGV  VGYG ++G  YW V+NSWG  WGE GYI++ RN  
Sbjct: 274 RAFQLYESGVFTGHCGTNLDHGVVAVGYGTENGVDYWTVRNSWGPKWGENGYIKLERNIN 333

Query: 321 SSNIGICGILMQASYPVK 338
           +++ G CGI   ASYP K
Sbjct: 334 ATS-GKCGIASMASYPTK 350


>gi|356515040|ref|XP_003526209.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 149/345 (43%), Positives = 203/345 (58%), Gaps = 43/345 (12%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           +  +L+LFL   +GI     S+  P+K    ++ ER ENW+ +Y + Y    E ++RF I
Sbjct: 7   KQHMLALFLFLAVGI-----SQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQI 61

Query: 86  YSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPY---------NEPRWP 135
           +  NV++I+  N+  N  +KL  N  ADL+ EEF  +  G  + Y         N  ++ 
Sbjct: 62  FKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTYEFSTTTFKLNGFKYE 121

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
           +V    +P ++DWR +GAVTP+KDQG QCGSCWAFS +AA EGI+++ TG LVSLSEQEL
Sbjct: 122 NVT--DIPEAIDWRVKGAVTPIKDQGDQCGSCWAFSTIAATEGIHQISTGNLVSLSEQEL 179

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD  S + GC GG+ME  FEFI K GG+T+E +YPY+G +  C T         I GY
Sbjct: 180 VDCD--SVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASPVAQIKGY 237

Query: 255 EAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           E +P+                         F  YS G+++  CG  L+HGVT VGYG ++
Sbjct: 238 EIVPSYSEEALQKAVANQPVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTEN 297

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  YW+VKNSWGT WGE GYIRM R   + + GICGI + +SYP 
Sbjct: 298 GTDYWIVKNSWGTQWGEKGYIRMHRGIAAKH-GICGIALDSSYPT 341


>gi|1046373|gb|AAC49135.1| SAG12 protein [Arabidopsis thaliana]
          Length = 346

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/315 (45%), Positives = 195/315 (61%), Gaps = 38/315 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSN 115
           M++R   W+ ++ R Y    E   R+ ++ +NV+ I+++NS     +FKL  N+FADL+N
Sbjct: 34  MQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTN 93

Query: 116 EEFISTYLGY---------NKPYNEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           +EF S Y G+         ++    P R+ +V    LP SVDWRK+GAVTP+K+QG CG 
Sbjct: 94  DEFCSMYTGFKGVSALSSQSQTKMSPFRYQNVSSGALPVSVDWRKKGAVTPIKNQGSCGC 153

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EG  ++K GKL+SLSEQ+LVDCD N  + GC GG M+ AFE I   GG+T
Sbjct: 154 CWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCEGGLMDTAFEHIKATGGLT 211

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TE DYPY+G++  C + KT   A +ITGYE +P                        + F
Sbjct: 212 TESDYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDF 271

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q YS GVF   C   L+H VT +GYGE  +G KYW++KNSWGT WGE+GY+R+ ++    
Sbjct: 272 QFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKDK 331

Query: 323 NIGICGILMQASYPV 337
             G+CG+ M+ASYP 
Sbjct: 332 Q-GLCGLAMKASYPT 345


>gi|32396020|gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/312 (48%), Positives = 191/312 (61%), Gaps = 35/312 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFI 119
           +E WL    + Y    E +RRF I+  N++YID  N    N S+ L   +FADL+NEE+ 
Sbjct: 38  YEGWLVGNGKAYNLLGEKERRFEIFWDNLRYIDDHNRAENNHSYTLGLTRFADLTNEEYR 97

Query: 120 STYLGYN----KPYNEPRWP------SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           STYLG      +P    R P      S     LP  VDWR++GAV P+KDQG CGSCWAF
Sbjct: 98  STYLGVKPGQVRPRRANRAPGRGRDLSANGDDLPQKVDWREKGAVAPIKDQGGCGSCWAF 157

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S VAAVEGIN++ TG L+ LSEQELVDCD  + N+GCNGG M+ AF+FI   GG+ TE+D
Sbjct: 158 STVAAVEGINQIVTGDLIVLSEQELVDCDT-AYNEGCNGGLMDYAFQFIISNGGIDTEED 216

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAI---------------PARYA-------FQLYS 267
           YPY+ ++  C  ++     V+I  YE +               P   A       FQLY 
Sbjct: 217 YPYKERDGLCDPNRKNAKVVSIDSYEDVLENDEHALKTAVAHQPVSVAIEGGGRSFQLYK 276

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
            G+FD  CG  L+HGV  VGYG + G+ YW+V+NSWG SWGEAGYIRM RN PSS+ G C
Sbjct: 277 SGIFDGRCGIDLDHGVVAVGYGTESGKDYWIVRNSWGKSWGEAGYIRMERNLPSSSSGKC 336

Query: 328 GILMQASYPVKR 339
           GI ++ SYP+K+
Sbjct: 337 GIAIEPSYPIKK 348


>gi|262360187|gb|ACY38051.2| cysteine proteinase C1A [Dactylis glomerata]
          Length = 365

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 191/319 (59%), Gaps = 39/319 (12%)

Query: 56  QSMEERFENWLKQYS---REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFAD 112
           +S+   +E W   ++   R  G+E E  RRF ++  NV+YI   N ++  F+L  NKFAD
Sbjct: 34  ESLRGLYETWRSHHTVSRRGLGAEAE-ARRFNVFKENVRYIHEANKKDRPFRLALNKFAD 92

Query: 113 LSNEEFISTYLGYNKPYNEP----------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           ++ +EF  TY G    ++             +       LPA+VDWR++GAVTP+KDQGQ
Sbjct: 93  MTTDEFRRTYAGSRVRHHRSLSGGRRQGGGSFMYADAENLPAAVDWRQKGAVTPIKDQGQ 152

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS + AVEGINK++TG+LVSLSEQEL+DC++  EN GCNGG M+ AF+FI + G
Sbjct: 153 CGSCWAFSTIVAVEGINKIRTGRLVSLSEQELMDCNI-GENDGCNGGLMDVAFQFIQQNG 211

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+TTE  YPY+G+ + C   K   H V+I GYE +PA                       
Sbjct: 212 GITTEASYPYQGEQNSCDQSKENSHDVSIDGYEDVPANDESALQKAVANQPVSVAIDASG 271

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF    G  L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R  
Sbjct: 272 NDFQFYSEGVFTTDGGTDLDHGVAAVGYGTTRDGTKYWIVKNSWGEDWGEKGYIRMQRGV 331

Query: 320 PSSNIGICGILMQASYPVK 338
             +  G+CGI M+ASYP K
Sbjct: 332 KQAE-GLCGIAMEASYPTK 349


>gi|217073894|gb|ACJ85307.1| unknown [Medicago truncatula]
 gi|388507498|gb|AFK41815.1| unknown [Medicago truncatula]
          Length = 362

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/315 (47%), Positives = 190/315 (60%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W   ++    + +E Q+RF ++ SNV ++   N  +  +KL  NKFAD++N
Sbjct: 34  ESLWDLYERWRSHHTVSR-NLNEKQKRFNVFKSNVMHVHNTNKMDKPYKLKLNKFADMTN 92

Query: 116 EEFISTYLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF +TY G    ++      PR         +   PASVDWRK+GAVT VKDQGQCGSC
Sbjct: 93  HEFKTTYAGSKVNHHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAVTDVKDQGQCGSC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN++KT +LV LSEQEL+DCD N ENQGCNGG ME AFE+I + GGVTT
Sbjct: 153 WAFSTVVAVEGINQIKTNRLVPLSEQELIDCD-NQENQGCNGGLMEYAFEYIKQKGGVTT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   +  C   K     V+I G+E +PA                         FQ
Sbjct: 212 ESYYPYTANDGSCDATKENVPTVSIDGHETVPANDEDALLKAVANQPVSVAIDAGGSDFQ 271

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG +LNHGV +VGYG    G  YW+V+NSWG  WGE G IRM RN  S+ 
Sbjct: 272 FYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGEQGCIRMKRNV-SNK 330

Query: 324 IGICGILMQASYPVK 338
            G+CGI M+ASYPVK
Sbjct: 331 EGLCGIAMEASYPVK 345


>gi|77554625|gb|ABA97421.1| Vignain precursor, putative [Oryza sativa Japonica Group]
 gi|222630746|gb|EEE62878.1| hypothetical protein OsJ_17681 [Oryza sativa Japonica Group]
          Length = 350

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 191/313 (61%), Gaps = 32/313 (10%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSN 115
           +M  R E W+ Q+ R Y    E  RR  ++ +NV +I+  N+   + + L  N+FADL++
Sbjct: 39  AMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTS 98

Query: 116 EEFISTYL---GYNKPYNEPR------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           EEF +T     G++ P N  R      + +V    LPASVDWR +GAVT +KDQGQCG C
Sbjct: 99  EEFKATMTNSKGFSTPNNGVRVSTGFKYENVSADALPASVDWRTKGAVTRIKDQGQCGCC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA+EG  KL TGKL+SLSEQELVDCDV+  +QGC GG ++ AF+FI   GG+T 
Sbjct: 159 WAFSAVAAMEGFVKLSTGKLISLSEQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTA 218

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------YAFQLY 266
           E +YPY  ++ RC+T      A +I GYE +PA                       FQ Y
Sbjct: 219 EANYPYTAEDGRCKTTAAADVAASIRGYEDVPANDEPSLMKAVAGQPVSVAVDASKFQFY 278

Query: 267 SHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
             GV    CG  L+HGVTV+GYG    G KYWLVKNSWGT+WGEAGY+RM ++      G
Sbjct: 279 GGGVMAGECGTSLDHGVTVIGYGAASDGTKYWLVKNSWGTTWGEAGYLRMEKDIDDKR-G 337

Query: 326 ICGILMQASYPVK 338
           +CG+ MQ SYP +
Sbjct: 338 MCGLAMQPSYPTE 350


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 188/307 (61%), Gaps = 32/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E+WL ++ + Y +  E  RRF I+  N+++ID  NS + ++KL  NKFADL+NEE+  T
Sbjct: 52  YESWLVKHGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDHTYKLGLNKFADLTNEEYRMT 111

Query: 122 YLGYNKPYNEPRWPSVQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           Y G     ++ +   ++           LP  VDWR++GAVT VKDQG CGSCWAFS   
Sbjct: 112 YTGIKTIDDKKKLSKMKSDRYAYRSGDSLPEYVDWREQGAVTDVKDQGSCGSCWAFSTTG 171

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           +VEG+NK+ TG L+S+SEQELV+CD  S NQGCNGG M+ AFEFI K GG+ TE+DYPY 
Sbjct: 172 SVEGVNKIVTGDLISVSEQELVNCDT-SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYT 230

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
           GK+ +C  +K     VTI  YE +P                          FQ Y+ G+F
Sbjct: 231 GKDGKCDKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQPVAVAIEAGGRDFQFYTSGIF 290

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV   GYG + G+ YWLVKNSWG  WGE GY++M RN    + G CGI M
Sbjct: 291 TGSCGTALDHGVLAAGYGTEDGKDYWLVKNSWGAEWGEGGYLKMERNIADKS-GKCGIAM 349

Query: 332 QASYPVK 338
           +ASYP+K
Sbjct: 350 EASYPIK 356


>gi|535473|emb|CAA53377.1| cysteine protease [Vicia sativa]
          Length = 368

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/346 (42%), Positives = 194/346 (56%), Gaps = 32/346 (9%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           M    +L  FL + L   + A     P       +   +E WL ++ + Y    E  +RF
Sbjct: 1   MASMTILPFFLFFSLITFSLALDIQLPTGRSNDEVMTMYEEWLVKHQKVYNGLREKDQRF 60

Query: 84  GIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP---------RW 134
            I+  N+ +ID  N+QN ++ +  NKFAD++NEE+   YLG                 R+
Sbjct: 61  QIFKDNLNFIDEHNAQNYTYIVGLNKFADMTNEEYRDMYLGTRSDIKRRIMKNKITGHRY 120

Query: 135 PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  LP  VDWR +GA+T +KDQG CGSCWAFS +A VE INK+ TGKLVSLSEQEL
Sbjct: 121 AYNSGDRLPVHVDWRLKGAITHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQEL 180

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD  + N+GCNGG M+ AFEFI   GG+ T+  YPY+G   RC   + K   V+I GY
Sbjct: 181 VDCD-RAFNEGCNGGLMDYAFEFIIGNGGIDTDQHYPYKGFEGRCDPTRKKAKIVSIDGY 239

Query: 255 EAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           E +P+                        A QLY  GVF   CG  L+H V +VGYG ++
Sbjct: 240 EDVPSNNENALKKAVAHQPVSVAIEASGRALQLYQSGVFTGKCGTSLDHAVVIVGYGSEN 299

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G  YWLV+NSWGT+WGE GY +M RN   ++ G CGI ++ASYPVK
Sbjct: 300 GLDYWLVRNSWGTNWGEDGYFKMERNVKGTHTGKCGIAVEASYPVK 345


>gi|1173630|gb|AAB37233.1| cysteine proteinase [Phalaenopsis sp. SM9108]
          Length = 359

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 198/316 (62%), Gaps = 46/316 (14%)

Query: 62  FENWLKQY--SREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEF 118
           +E W   +  SR+    DE Q+RF ++  N +YI D+   +++ +KL  NKFADL+N EF
Sbjct: 38  YERWRSHHTVSRDL---DEKQKRFNVFKENPRYIHDFNKRKDIPYKLRLNKFADLTNHEF 94

Query: 119 ISTYLGYNKPY-------------NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
            STY G    +             N   + S+    LPAS+DWR++GAVT VKDQGQCGS
Sbjct: 95  RSTYAGSRINHHRSLRGSRRGGATNSFMYQSLDSRSLPASIDWRQKGAVTAVKDQGQCGS 154

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS VAAVEGIN++KT KL+SLSEQEL+DCD + EN GCNGG M+ AF+FI K GG++
Sbjct: 155 CWAFSTVAAVEGINQIKTKKLLSLSEQELIDCDTD-ENNGCNGGLMDYAFDFIKKNGGIS 213

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           +E +YPY  ++  C T+K K H V+I G+E +PA                       Y F
Sbjct: 214 SEAEYPYAAEDSYCATEK-KSHVVSIDGHEDVPANDEDSLLKAVANQPVSIAIEASGYDF 272

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q YS GVF    G +L+HGV +VGYG+   G KYW+V+NSWG  WGE GYIR++  S S 
Sbjct: 273 QFYSEGVFTGRSGTELDHGVAIVGYGKTQQGTKYWIVRNSWGAEWGEKGYIRISAASDSK 332

Query: 323 NIGICGILMQASYPVK 338
              +CG+ M+ASYP+K
Sbjct: 333 R--LCGLAMEASYPIK 346


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 146/307 (47%), Positives = 189/307 (61%), Gaps = 32/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFIS 120
           FE+WL  + + Y +  E ++RF I+ +N++YID  N  ++  FKL  NKFADL+NEE+ S
Sbjct: 45  FESWLVTHGKSYNALGEEEKRFQIFKNNLRYIDEQNLVEDRGFKLGLNKFADLTNEEYRS 104

Query: 121 TYLGYNK-------PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            Y G               R+ ++    LP SVDWR+ GAV  VKDQG CGSCWAFS ++
Sbjct: 105 KYTGIKSKDLRKKVSAKSGRYATLSGESLPESVDWRESGAVATVKDQGSCGSCWAFSTIS 164

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TGKL++LSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ T+ DYPY 
Sbjct: 165 AVEGINQIATGKLITLSEQELVDCD-RSYNEGCNGGLMDYAFEFIINNGGIDTDVDYPYT 223

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGVF 271
           G++ +C   +     VTI  YE +PA                         FQ Y  G+F
Sbjct: 224 GRDGKCDQYRKNAKVVTIDSYEDVPAYDELALKKAAANQPISVAIEASGRDFQFYDSGIF 283

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV VVGYG ++G+ YW+V+NSWG  WGE GY+RM R   SS  GICGI +
Sbjct: 284 TGKCGIALDHGVVVVGYGTENGKDYWIVRNSWGADWGENGYLRMER-GISSKTGICGIAI 342

Query: 332 QASYPVK 338
           + SYPVK
Sbjct: 343 EPSYPVK 349


>gi|302143412|emb|CBI21973.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/336 (46%), Positives = 194/336 (57%), Gaps = 54/336 (16%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY REY   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARNLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC                      +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCT---------------------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 224

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ YS GVF   CG +L+HGV+ VGYG  D G KYWLVKN
Sbjct: 225 LQKAVAHQPIAVAIDAGGSEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKN 284

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 285 SWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 319


>gi|296081395|emb|CBI16828.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 209/349 (59%), Gaps = 40/349 (11%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQK--YDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M +  +++L L+ V G+   A S  + +K     +S+ + +E W + Y       +E  +
Sbjct: 3   MEKVILVALSLVLVFGL---AESFDFDEKDLASEESLWDLYERW-RSYHTVSRDLEEKNK 58

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-KPYNEPRWPSVQYL 140
           RF ++  N +++  +N  +  +KL  NKFAD++N EF S+Y G   K Y   R       
Sbjct: 59  RFNVFKENTKHVHKVNQMDKPYKLKLNKFADMTNHEFRSSYGGSKVKHYRMLRGDRRGTG 118

Query: 141 G--------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           G        LP SVDWRK+GAVT +KDQG+CGSCWAFS V  VEGIN++KT +L+SLSEQ
Sbjct: 119 GFMHEKTTYLPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQ 178

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           +L+DCD  S++ GCNGG ME AFEFI K GG+TTE++YPY+ K++RC   K     VTI 
Sbjct: 179 QLIDCD-RSDDHGCNGGLMESAFEFIKKNGGITTENNYPYKAKDERCDMLKMNAPVVTID 237

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           G+E++P                           Q YS GVFD  CG +L+HGV +VGYG 
Sbjct: 238 GHESVPVNDERALMKAVAHQPVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGT 297

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYW+VKNSWG  WGE GYIRMAR   ++  G CGI M+ASYPVK
Sbjct: 298 TLDGTKYWIVKNSWGAEWGEKGYIRMARGIQAAE-GQCGIAMEASYPVK 345


>gi|148927382|gb|ABR19827.1| cysteine proteinase [Elaeis guineensis]
          Length = 470

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/318 (47%), Positives = 192/318 (60%), Gaps = 37/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFA 111
           + M   +E WL ++ R Y +  E +RRF I+  NV +ID  N+     + SF+L  N+FA
Sbjct: 44  EEMRILYEGWLAKHGRAYNALGEKERRFEIFKDNVLFIDAHNAAADAGHRSFRLGLNRFA 103

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSV-----QYLG---LPASVDWRKEGAVTPVKDQGQC 163
           D++NEE+ + YLG  +P    R   V     +Y     LP SVDWR +GAV  VKDQG C
Sbjct: 104 DMTNEEYRAVYLG-TRPAGHRRRARVGSDRYRYNAGEDLPESVDWRAKGAVAAVKDQGSC 162

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS VAAVEGINK+ TG L+SLSEQELVDCD N  NQGCNGG M+  FEFI   GG
Sbjct: 163 GSCWAFSTVAAVEGINKIVTGDLISLSEQELVDCD-NGYNQGCNGGLMDYGFEFIINNGG 221

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           + TE+DYPY  ++ +C   +     V+I GYE +P                         
Sbjct: 222 IDTEEDYPYTARDGKCDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQPVSVAIEAGGR 281

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            FQLY  G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG  WGE+GYIRM RN  +
Sbjct: 282 EFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKDYWIVRNSWGGDWGESGYIRMERNVNT 341

Query: 322 SNIGICGILMQASYPVKR 339
           S  G CGI ++ SYP K+
Sbjct: 342 S-TGKCGIAIEPSYPTKK 358


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 191/321 (59%), Gaps = 32/321 (9%)

Query: 48  GYPQKYDPQSMEE--RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFK 104
           G   K D ++ EE   FE WL +  + Y    E  +RF I+  N++++   NS  N S++
Sbjct: 21  GVTAKADHRNPEEVKMFERWLVENHKNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYE 80

Query: 105 LTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKD 159
           L   +FADL+NEEF + YL            S +YL      LP  VDWR +GAV PVKD
Sbjct: 81  LGLTRFADLTNEEFRAIYLRSKMERTRDSVKSERYLHNVGDKLPDEVDWRAKGAVVPVKD 140

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+ AVEGIN++KTG+LVSLSEQELVDCD  S N GC GG M+ AF+FI 
Sbjct: 141 QGSCGSCWAFSAIGAVEGINQIKTGELVSLSEQELVDCDT-SYNNGCGGGLMDYAFQFII 199

Query: 220 KIGGVTTEDDYPYRGKNDR-CQTDKTKHHAVTITGYEAIPAR------------------ 260
             GG+ TE+DYPY   +D  C TDK     VTI GYE +P                    
Sbjct: 200 SNGGIDTEEDYPYTATDDNICNTDKKNTRVVTIDGYEDVPENENSLKKALANQPISVAIE 259

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
                FQLY  GVF   CG  L+HGV  VGYG   G+ YW+++NSWG++WGE+GYI++ R
Sbjct: 260 AGGRGFQLYKSGVFTGTCGTALDHGVVAVGYGTSEGQDYWIIRNSWGSNWGESGYIKLQR 319

Query: 318 NSPSSNIGICGILMQASYPVK 338
           N   S+ G CG+ M ASYP K
Sbjct: 320 NIKDSS-GKCGVAMMASYPTK 339


>gi|359473128|ref|XP_002285397.2| PREDICTED: vignain-like [Vitis vinifera]
          Length = 357

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 209/349 (59%), Gaps = 40/349 (11%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQK--YDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M +  +++L L+ V G+   A S  + +K     +S+ + +E W + Y       +E  +
Sbjct: 1   MEKVILVALSLVLVFGL---AESFDFDEKDLASEESLWDLYERW-RSYHTVSRDLEEKNK 56

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-KPYNEPRWPSVQYL 140
           RF ++  N +++  +N  +  +KL  NKFAD++N EF S+Y G   K Y   R       
Sbjct: 57  RFNVFKENTKHVHKVNQMDKPYKLKLNKFADMTNHEFRSSYGGSKVKHYRMLRGDRRGTG 116

Query: 141 G--------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           G        LP SVDWRK+GAVT +KDQG+CGSCWAFS V  VEGIN++KT +L+SLSEQ
Sbjct: 117 GFMHEKTTYLPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQ 176

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           +L+DCD  S++ GCNGG ME AFEFI K GG+TTE++YPY+ K++RC   K     VTI 
Sbjct: 177 QLIDCD-RSDDHGCNGGLMESAFEFIKKNGGITTENNYPYKAKDERCDMLKMNAPVVTID 235

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           G+E++P                           Q YS GVFD  CG +L+HGV +VGYG 
Sbjct: 236 GHESVPVNDERALMKAVAHQPVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGT 295

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYW+VKNSWG  WGE GYIRMAR   ++  G CGI M+ASYPVK
Sbjct: 296 TLDGTKYWIVKNSWGAEWGEKGYIRMARGIQAAE-GQCGIAMEASYPVK 343


>gi|312281697|dbj|BAJ33714.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 141/315 (44%), Positives = 192/315 (60%), Gaps = 38/315 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSN 115
           M++R + W+ ++ R Y    E   R+ ++  NV+ I+ +N+     +FKL  N+FADL+N
Sbjct: 35  MQKRHDEWMAKHGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTN 94

Query: 116 EEFISTYLGYN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           +EF S Y GY              +  R+ +V    LP SVDWRK+GAVTP+K+QG CG 
Sbjct: 95  DEFRSMYTGYKGGSVLSSQSGTKTSSFRYQNVSSGALPVSVDWRKKGAVTPIKNQGTCGC 154

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EG  K+K GKL+SLSEQ+LVDCD N  + GC+GG M+ AFE I   GG+T
Sbjct: 155 CWAFSAVAAIEGATKIKKGKLISLSEQQLVDCDTN--DFGCSGGLMDTAFEHIMATGGLT 212

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TE +YPY+GK+  C+   TK  A +ITGYE +P                        + F
Sbjct: 213 TESNYPYKGKDATCKIKNTKPTATSITGYEDVPVNDEKALMKAVAHQPVSIGIEGGGFDF 272

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q Y  GVF   C   L+H VT VGYG+  +G KYW++KNSWGT WGE+GY+R+ ++    
Sbjct: 273 QFYGSGVFTGECTTYLDHAVTAVGYGQSSNGSKYWIIKNSWGTKWGESGYMRIKKDVKDK 332

Query: 323 NIGICGILMQASYPV 337
             G+CG+ M+ASYP 
Sbjct: 333 K-GLCGLAMKASYPT 346


>gi|1345573|emb|CAA40073.1| endopeptidase (EP-C1) [Phaseolus vulgaris]
          Length = 361

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/317 (47%), Positives = 188/317 (59%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+ + +E W   +  SR  G   E  +RF ++ +N+ ++   N  +  +KL  NKFAD+
Sbjct: 33  ESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADM 89

Query: 114 SNEEFISTYLGYN---------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G            P+    +   + + +P SVDWRK+GAVT VKDQGQCG
Sbjct: 90  TNHEFRSTYAGSKVNHHRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCG 149

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V AVEGIN++KT KLV+LSEQELVDCD   ENQGCNGG ME AFEFI + GG+
Sbjct: 150 SCWAFSTVVAVEGINQIKTNKLVALSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGI 208

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+ +   C   K    AV+I G+E +PA                         
Sbjct: 209 TTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSD 268

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S
Sbjct: 269 FQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRN-IS 327

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M  SYP+K
Sbjct: 328 KKEGLCGIAMLPSYPIK 344


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 160/342 (46%), Positives = 204/342 (59%), Gaps = 41/342 (11%)

Query: 36  WVLGIPAGAWSEGYPQKY--DPQSMEERFENW-LKQYSREYGSEDEWQRRFGIYSSNVQY 92
           W L   A   S G+  +     +S+   ++ W L+  S      DE  RRF I+  NV++
Sbjct: 17  WTLSANALDSSPGFTDEELESDESLRGLYDKWALQHRSTRSLDSDEHARRFEIFKENVKH 76

Query: 93  IDYINSQNLSFKLTDNKFADLSNEEF----ISTYLGYNKPYNEPRW---PSVQYLG---L 142
           ID +N ++  +KL  NKFADLSNEEF    ++T +  +K     R     S  Y     L
Sbjct: 77  IDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKMEKHKSLRGDRGVESGSFMYQNSKRL 136

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           PAS+DWRK+GAVTPVK+QGQCGSCWAFS +A+VEGIN +KTGKLVSLSEQ+LVDC  + E
Sbjct: 137 PASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVEGINYIKTGKLVSLSEQQLVDC--SKE 194

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK--TKHHAVTITGYEAIPAR 260
           N GCNGG M+ AF++I   GG+ TED+YPY  +   C T K  +K  A  I G+E +PA 
Sbjct: 195 NAGCNGGLMDNAFQYIIDNGGIVTEDEYPYTAEAGECSTTKIESKSIATIIDGFEDVPAN 254

Query: 261 ----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYW 297
                                 + FQ YS GVF   CG +L+HGV VVGYG+   G  YW
Sbjct: 255 NEGALKKAVAHQPVSIAIEASGHDFQFYSTGVFTGKCGTELDHGVVVVGYGKSPEGINYW 314

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           +V+NSWG  WGE GYIRM R   ++  G CGI MQASYP K+
Sbjct: 315 IVRNSWGPEWGEQGYIRMQRGIEATE-GKCGISMQASYPTKK 355


>gi|544129|sp|P25803.2|CYSEP_PHAVU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase EP-C1; Flags: Precursor
 gi|20994|emb|CAA44816.1| endopeptidase [Phaseolus vulgaris]
          Length = 362

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/317 (47%), Positives = 188/317 (59%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+ + +E W   +  SR  G   E  +RF ++ +N+ ++   N  +  +KL  NKFAD+
Sbjct: 34  ESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADM 90

Query: 114 SNEEFISTYLGYN---------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G            P+    +   + + +P SVDWRK+GAVT VKDQGQCG
Sbjct: 91  TNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCG 150

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V AVEGIN++KT KLV+LSEQELVDCD   ENQGCNGG ME AFEFI + GG+
Sbjct: 151 SCWAFSTVVAVEGINQIKTNKLVALSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGI 209

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+ +   C   K    AV+I G+E +PA                         
Sbjct: 210 TTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSD 269

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S
Sbjct: 270 FQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNI-S 328

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M  SYP+K
Sbjct: 329 KKEGLCGIAMLPSYPIK 345


>gi|356517358|ref|XP_003527354.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
 gi|356577767|ref|XP_003556994.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 343

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 198/344 (57%), Gaps = 47/344 (13%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL LL+  G  A   +    +     SM ER E W+ +Y++ Y    E +RRF I+  N
Sbjct: 10  ISLALLFCSGFLAFQVT---CRTLQDASMYERHEEWMGRYAKVYKDPQERERRFKIFKEN 66

Query: 90  VQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE---------PRWPSVQY 139
           V YI+ + N+ N  + L  N+FADL+NEEFI+       P N           R  + +Y
Sbjct: 67  VNYIEAFNNAANKPYTLGINQFADLTNEEFIA-------PRNRFKGHMCSSITRTTTFKY 119

Query: 140 ---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                +P++VDWR++GAVTP+KDQGQCG CWAFSAVAA EGI+ L  GKL+SLSEQE+VD
Sbjct: 120 ENVTAIPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQEVVD 179

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD   E+QGC GG+M+ AF+FI +  G+  E +YPY+  + +C      +H  TITGYE 
Sbjct: 180 CDTKGEDQGCAGGFMDGAFKFIIQNHGLNNEPNYPYKAVDGKCNAKAAANHVATITGYED 239

Query: 257 IPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHG 293
           +P                          FQ Y  GVF   CG +L+HGVT VGYG    G
Sbjct: 240 VPVNNEKALQKAVANQPVSVAIDASGSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADG 299

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            +YWLVKNSWGT WGE GYIRM R   +   G+ GI M ASYP 
Sbjct: 300 TEYWLVKNSWGTEWGEEGYIRMQRGVKAEE-GLXGIAMMASYPT 342


>gi|224133760|ref|XP_002321654.1| predicted protein [Populus trichocarpa]
 gi|222868650|gb|EEF05781.1| predicted protein [Populus trichocarpa]
          Length = 362

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 159/349 (45%), Positives = 202/349 (57%), Gaps = 40/349 (11%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQK--YDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M +   ++L L  VLGI     S  + +K     +S+ + +E W   ++    S DE  +
Sbjct: 3   MKKFLFVALSLALVLGITE---SLDFHEKDLESEESLWDLYERWRSHHTVST-SLDEKHK 58

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG 141
           RF ++  NV ++   N     +KL  NKFAD++N EF S Y G    ++     + +  G
Sbjct: 59  RFNVFKENVMHVHKTNKMGKPYKLKLNKFADMTNHEFRSVYAGSKVKHHRMFRGTTRGNG 118

Query: 142 ---------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
                    +P SVDWRK+GAVT VKDQGQCGSCWAFS + AVEGIN +KT +LVSLSEQ
Sbjct: 119 SFMYGKVEKVPTSVDWRKKGAVTAVKDQGQCGSCWAFSTIVAVEGINYIKTNELVSLSEQ 178

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCD  +ENQGCNGG ME AFEFI K  G+TTE  YPY+ ++  C   K  + AV+I 
Sbjct: 179 ELVDCDT-TENQGCNGGLMEYAFEFIKKKRGITTESTYPYKAEDGHCDAAKENNPAVSID 237

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +P                          FQ YS GVF   CG +L+HGV VVGYG 
Sbjct: 238 GYEKVPENDEDALLKAAANQPVSVAIDAGGSDFQFYSEGVFIGECGTELDHGVAVVGYGT 297

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYW+V+NSWG  WGE GYIRM R   S   G+CGI M+ASYP+K
Sbjct: 298 TLDGTKYWIVRNSWGPEWGEKGYIRMQR-GISDKEGLCGIAMEASYPIK 345


>gi|356515050|ref|XP_003526214.1| PREDICTED: vignain-like [Glycine max]
          Length = 344

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 155/347 (44%), Positives = 202/347 (58%), Gaps = 45/347 (12%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           +  +L+LFL   +GI     S+  P+K    ++ ER ENW+ +Y + Y    E ++RF I
Sbjct: 7   KQHMLALFLFLAVGI-----SQVMPRKLHQTALRERHENWMAEYGKIYKDAAEKEKRFQI 61

Query: 86  YSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPY---------NEPRWP 135
           +  NV++I+  N+  N  +KL  N  ADL+ EEF  +  G  + Y         N  ++ 
Sbjct: 62  FKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTYEFSTTTFKLNGFKYE 121

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
           +V    +P ++DWR +GAVTP+KDQG QCGSCWAFS VAA EGI ++ TG L+SLSEQEL
Sbjct: 122 NV--TDIPEAIDWRVKGAVTPIKDQGDQCGSCWAFSTVAATEGIYQISTGMLMSLSEQEL 179

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD  S + GC+GG ME  FEFI K GG+++E +YPY   +  C   K    A  I GY
Sbjct: 180 VDCD--SVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGTCDASKEASPAAQIKGY 237

Query: 255 EAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG--E 290
           E +PA                         FQ YS GVF   CG QL+HGVTVVGYG  +
Sbjct: 238 ETVPANSEEALQQAVANQPVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTD 297

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           D   +YW+VKNSWGT WGE GYIRM R   +   G+CGI M ASYP 
Sbjct: 298 DGTHEYWIVKNSWGTQWGEEGYIRMQRGIDALE-GLCGIAMDASYPT 343


>gi|356515052|ref|XP_003526215.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/348 (43%), Positives = 197/348 (56%), Gaps = 41/348 (11%)

Query: 21  MRMMLRNAVLSLFLL---WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSED 77
           MR   +N  L LFL+   W   + +   SE            ER E W+ QY + Y    
Sbjct: 1   MRSFSQNHYLILFLILTVWTFHVMSRRLSE--------VCTSERHEKWMAQYGKLYTDAA 52

Query: 78  EWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK------PYN 130
           E ++RF I+ +NVQ+I+  N+  +  F L+ N+FADL NEEF ++ +   K         
Sbjct: 53  EKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFKASLINVQKKESGVETAT 112

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
           E  +       +P ++DWRK GAVTP+KDQG CGSCWAFS VAA+EGI+++ TGKLVSLS
Sbjct: 113 ETSFRYESITKIPVTMDWRKRGAVTPIKDQGNCGSCWAFSTVAAIEGIHQITTGKLVSLS 172

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDC V  +++GCN GY E+AFEF+ K GG+ +E  YPY+  N  C   K       
Sbjct: 173 EQELVDC-VKGKSEGCNFGYKEEAFEFVAKNGGLASEISYPYKANNKTCMVKKETQGVAQ 231

Query: 251 ITGYEAIPARY--------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           I GYE +P+                      A Q YS G+F   CG   NH VTV+GYG+
Sbjct: 232 IKGYENVPSNSEKALLKAVANQPVSVYIDAGALQFYSSGIFTGKCGTAPNHAVTVIGYGK 291

Query: 291 DH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G KYWLVKNSWGT WGE GYI+M R+  +   G+CGI   ASYP 
Sbjct: 292 ARGGAKYWLVKNSWGTKWGEKGYIKMKRDIRAKE-GLCGIATNASYPT 338


>gi|255547982|ref|XP_002515048.1| cysteine protease, putative [Ricinus communis]
 gi|223546099|gb|EEF47602.1| cysteine protease, putative [Ricinus communis]
          Length = 359

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 196/315 (62%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+   +E W   ++    S  E  +RF ++  N+++I  +N ++  +KL  NKFAD++N
Sbjct: 34  ESLWNLYERWRSHHTVSR-SLTEKNQRFNVFKENLKHIHKVNQKDRPYKLRLNKFADMTN 92

Query: 116 EEFISTYLG--------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
            EF+  Y G        ++    +  +       LP+S+DWRK+GAVT VKDQG+CGSCW
Sbjct: 93  HEFLQHYGGSKVSHYRMFHGSRRQTGFAHENTSNLPSSIDWRKQGAVTGVKDQGKCGSCW 152

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS+VAAVEGINK+KTG+L+SLSEQELVDC  NS N GC+GG ME+AF FI K GG+TTE
Sbjct: 153 AFSSVAAVEGINKIKTGELISLSEQELVDC--NSVNHGCDGGLMEQAFSFIEKTGGLTTE 210

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
           ++YPYR K+  C + K     VTI GYE +P                          FQ 
Sbjct: 211 NNYPYRAKDGYCDSAKMNTPMVTIDGYEMVPENDEHALMQAVANQPVSIAIDAGGQDFQF 270

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV+   CG +LNHGV +VGYG    G KYW+VKNSWG+ WGE G+IRM R +     
Sbjct: 271 YSEGVYTGDCGTELNHGVALVGYGATQDGTKYWIVKNSWGSEWGENGFIRMQRENDVEE- 329

Query: 325 GICGILMQASYPVKR 339
           G+CGI ++ASYP+K+
Sbjct: 330 GLCGITLEASYPIKQ 344


>gi|356563584|ref|XP_003550041.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 366

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 160/355 (45%), Positives = 201/355 (56%), Gaps = 42/355 (11%)

Query: 17  IAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE 76
           +A  M +M+      LFL + L     A        Y    +   +E WL ++ + Y   
Sbjct: 1   MASIMTLMISTL---LFLSFTLSC---AIDTSTITNYTDNEVMTMYEEWLVKHQKVYNGL 54

Query: 77  DEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP 135
            E  +RF ++  N+ +I ++ N+QN ++KL  NKFAD++NEE+   Y G  K   + R  
Sbjct: 55  GEKDKRFQVFKDNLGFIQEHNNNQNNTYKLGLNKFADMTNEEYRVMYFG-TKSDAKRRLM 113

Query: 136 SVQYLG----------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK 185
             +  G          LP  VDWR +GAV P+KDQG CGSCWAFS VA VE INK+ TGK
Sbjct: 114 KTKSTGHRYAYSAGDQLPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGK 173

Query: 186 LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK 245
            VSLSEQELVDCD  + NQGCNGG M+ AFEFI + GG+ T+ DYPYRG +  C   K  
Sbjct: 174 FVSLSEQELVDCD-RAYNQGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKN 232

Query: 246 HHAVTITGYEAIP-----------AR-----------YAFQLYSHGVFDEYCGHQLNHGV 283
             AV I GYE +P           AR            A QLY  GVF   CG  L+HGV
Sbjct: 233 AKAVNIDGYEDVPPYDENALKKAVARQPVSIAIEASGRALQLYQSGVFTGECGTSLDHGV 292

Query: 284 TVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            VVGYG ++G  YWLV+NSWGT WGE GY +M RN  +   G CGI M+ASYPVK
Sbjct: 293 VVVGYGSENGVDYWLVRNSWGTGWGEDGYFKMQRNVRTPT-GKCGITMEASYPVK 346


>gi|357474579|ref|XP_003607574.1| Cysteine protease [Medicago truncatula]
 gi|355508629|gb|AES89771.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 187/313 (59%), Gaps = 30/313 (9%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFA 111
           D   + E+ E W+  Y + Y    E + R  I+  NV YI+  N+   N  +KL  N+FA
Sbjct: 33  DDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFA 92

Query: 112 DLSNEEFISTYLGYN----KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           D++NEEFI++   +         +      +   +P++VDWRK+GAVTPVK+QGQCG CW
Sbjct: 93  DITNEEFIASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKKGAVTPVKNQGQCGCCW 152

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA EGI+KL TGKLVSLSEQELVDCD    +QGC GG M+ AF+FI +  G+ TE
Sbjct: 153 AFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLHTE 212

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQL 265
             YPY+G +  C  ++T   A TI GYE +PA                         FQ 
Sbjct: 213 AQYPYQGVDGTCSANETSTPAATIAGYEDVPANNENALQKAVANQPISVAIDASGSDFQF 272

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GVF   CG QL+HGVT VGYG  + G KYWLVKNSWG  WGE GYIRM R+  ++  
Sbjct: 273 YKSGVFTGSCGTQLDHGVTAVGYGISNDGTKYWLVKNSWGNDWGEEGYIRMQRSVDAAQ- 331

Query: 325 GICGILMQASYPV 337
           G+CGI M ASYP 
Sbjct: 332 GLCGIAMMASYPT 344


>gi|357160300|ref|XP_003578721.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 349

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 153/349 (43%), Positives = 201/349 (57%), Gaps = 39/349 (11%)

Query: 28  AVLSLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIY 86
           A+  +FLL V LG      +    ++    +M ER E W+ Q+ R Y    E  RRF  +
Sbjct: 2   AIPKVFLLAVVLGCICLCSTVLSARELGDAAMVERHEQWMAQHGRVYKDGAEKARRFEAF 61

Query: 87  SSNVQYIDYINS--QNLSFKLTDNKFADLSNEEFISTYL--GYNK----------PYNEP 132
            +NV +I+  N+      F L  N+F DL+N+EF +T    G+ K          P    
Sbjct: 62  RNNVVFIESFNAAGNRRKFWLGVNQFTDLTNDEFRATKTNKGFIKRNAAAVNKASPTGTF 121

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           R+ +V    LPA+VDWR +GAVTP+K+QGQCG CWAFSAVAA EGI +L TGKLV LSEQ
Sbjct: 122 RYSNVSADALPAAVDWRAKGAVTPIKNQGQCGCCWAFSAVAATEGIVQLSTGKLVPLSEQ 181

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCD N  + GC GG M+ AFEFI K GG+T+E +YPY  ++ +C+   T +   TI 
Sbjct: 182 ELVDCDANGADHGCEGGEMDDAFEFIIKNGGLTSETNYPYTAQDGQCKAKNTINSVATIK 241

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG- 289
           GYE +PA                         FQ Y+ GV    CG  L+HG+  VGYG 
Sbjct: 242 GYEDVPANDEASLMKAVAAQPVSVAVDGGDMVFQHYAGGVLSGSCGTSLDHGIVAVGYGA 301

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            D G K+WL+KNSWGT+WGE GYIRM ++   +  G+CG+ MQ SYP +
Sbjct: 302 ADDGTKFWLMKNSWGTTWGEDGYIRMEKDVADAG-GMCGLAMQPSYPTE 349


>gi|351629615|gb|AEQ54771.1| KDDL-tailed cysteine proteinase CP4 [Coffea canephora]
          Length = 359

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/349 (44%), Positives = 206/349 (59%), Gaps = 38/349 (10%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQY--SREYGSEDEWQ 80
           M +  A L   +L V+ + A +           +S+ + +E W   +  SR+     E +
Sbjct: 1   MKMGKAFLFAVVLAVILVAAMSMEITERDLASEESLWDLYERWRSHHTVSRDL---SEKR 57

Query: 81  RRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--- 137
           +RF ++ +NV +I  +N ++  +KL  N FAD++N EF   Y    K Y           
Sbjct: 58  KRFNVFKANVHHIHKVNQKDKPYKLKLNSFADMTNHEFREFYSSKVKHYRMLHGSRANTG 117

Query: 138 ----QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
               +   LPASVDWRK+GAVT VK+QG+CGSCWAFS V  VEGINK+KTG+LVSLSEQE
Sbjct: 118 FMHGKTESLPASVDWRKQGAVTGVKNQGKCGSCWAFSTVVGVEGINKIKTGQLVSLSEQE 177

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDC+  ++N+GCNGG ME A+EFI K GG+TTE  YPY+ ++  C + K    AVTI G
Sbjct: 178 LVDCE--TDNEGCNGGLMENAYEFIKKSGGITTERLYPYKARDGSCDSSKMNAPAVTIDG 235

Query: 254 YEAIPAR----------------------YAFQLYSHGVF-DEYCGHQLNHGVTVVGYGE 290
           +E +PA                          Q YS GV+  + CG++L+HGV VVGYG 
Sbjct: 236 HEMVPANDENALMKAVANQPVSVAIDASGSDMQFYSEGVYAGDSCGNELDHGVAVVGYGT 295

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYW+VKNSWGT WGE GYIRM R   ++  G+CGI M+ASYP+K
Sbjct: 296 ALDGTKYWIVKNSWGTGWGEQGYIRMQRGVDAAEGGVCGIAMEASYPLK 344


>gi|222425026|dbj|BAH20463.1| cysteine protease [Spinacia oleracea]
          Length = 473

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 189/313 (60%), Gaps = 37/313 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFIS 120
           +E+WL Q+ + Y +  E ++RF I+  N+++ID  NS +  +FK+  NKFADL+NEEF S
Sbjct: 53  YESWLVQHRKNYNALGEKEKRFAIFKDNLEFIDQHNSDDSQTFKVGLNKFADLTNEEFRS 112

Query: 121 TYLG--------YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCW 167
            YLG              + +  S +YL      LP +VDWRK GAV  VKDQGQCGSCW
Sbjct: 113 VYLGRKKSSSSSPLLSSAKSKVKSDRYLFKEGDELPEAVDWRKNGAVAKVKDQGQCGSCW 172

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS +AAVEGIN++ TG+L+SLSEQELVDCD  S N GC+GG M+ A+EFI   GG+ T+
Sbjct: 173 AFSTIAAVEGINQIVTGELLSLSEQELVDCDT-SYNSGCDGGLMDYAYEFIINNGGIDTD 231

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            DYPY  K+ +C   +     VTI  +E +P                          FQ 
Sbjct: 232 ADYPYTAKDGKCDQYRKNAKVVTIDDFEDVPENDEKALQKAVAHQPVSVAIEAGGSTFQF 291

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           Y  GVF   CG  L+HGV  VGYG D G+ YW+V+NSWG  WGE+GYIRM RN  +   G
Sbjct: 292 YQSGVFTGKCGADLDHGVVAVGYGSDDGKDYWIVRNSWGADWGESGYIRMERNLETVKTG 351

Query: 326 ICGILMQASYPVK 338
            CGI ++ SYP+K
Sbjct: 352 KCGIAIEPSYPIK 364


>gi|356515038|ref|XP_003526208.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 152/348 (43%), Positives = 196/348 (56%), Gaps = 41/348 (11%)

Query: 21  MRMMLRNAVLSLFLL---WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSED 77
           MR   +N  L LFL+   W   + +   SE            ER E W+ QY + Y    
Sbjct: 1   MRSFSQNHYLILFLILTVWTFHVMSRRLSE--------VCTSERHEKWMAQYGKLYTDAA 52

Query: 78  EWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK------PYN 130
           E ++RF I+ +NVQ+I+  N+  +  F L+ N+FADL NEEF ++ +   K         
Sbjct: 53  EKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFKASLINVQKKESGVETAT 112

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
           E  +       +P ++DWRK GAVTP+KDQG CGSCWAFS VAA+EGI+++ TGKLVSLS
Sbjct: 113 ETSFRYESITKIPVTMDWRKRGAVTPIKDQGNCGSCWAFSIVAAIEGIHQITTGKLVSLS 172

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDC V  +++GCN GY E+AFEF+ K GG+ +E  YPY+  N  C   K       
Sbjct: 173 EQELVDC-VKGKSEGCNFGYKEEAFEFVAKNGGLASEISYPYKANNKTCMVKKETQGVAQ 231

Query: 251 ITGYEAIPARY--------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           I GYE +P+                      A Q YS G+F   CG   NH  TV+GYG+
Sbjct: 232 IKGYENVPSNSEKALLKAVANQPVSVYIDAGALQFYSSGIFTGKCGTAPNHAATVIGYGK 291

Query: 291 DH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G KYWLVKNSWGT WGE GYIRM R+  +   G+CGI   ASYP 
Sbjct: 292 ARGGAKYWLVKNSWGTKWGEKGYIRMKRDIRAKE-GLCGIATNASYPT 338


>gi|18422605|ref|NP_568651.1| senescence-associated protein 12 [Arabidopsis thaliana]
 gi|13877737|gb|AAK43946.1|AF370131_1 putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|9758936|dbj|BAB09317.1| senescence-specific cysteine protease [Arabidopsis thaliana]
 gi|14532898|gb|AAK64131.1| putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|332007929|gb|AED95312.1| senescence-associated protein 12 [Arabidopsis thaliana]
          Length = 346

 Score =  276 bits (707), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/315 (44%), Positives = 195/315 (61%), Gaps = 38/315 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSN 115
           M++R   W+ ++ R Y    E   R+ ++ +NV+ I+++NS     +FKL  N+FADL+N
Sbjct: 34  MQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTN 93

Query: 116 EEFISTYLGY---------NKPYNEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           +EF S Y G+         ++    P R+ +V    LP SVDWRK+GAVTP+K+QG CG 
Sbjct: 94  DEFRSMYTGFKGVSALSSQSQTKMSPFRYQNVSSGALPVSVDWRKKGAVTPIKNQGSCGC 153

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EG  ++K GKL+SLSEQ+LVDCD N  + GC GG M+ AFE I   GG+T
Sbjct: 154 CWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCEGGLMDTAFEHIKATGGLT 211

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TE +YPY+G++  C + KT   A +ITGYE +P                        + F
Sbjct: 212 TESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDF 271

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q YS GVF   C   L+H VT +GYGE  +G KYW++KNSWGT WGE+GY+R+ ++    
Sbjct: 272 QFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKDK 331

Query: 323 NIGICGILMQASYPV 337
             G+CG+ M+ASYP 
Sbjct: 332 Q-GLCGLAMKASYPT 345


>gi|302143411|emb|CBI21972.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/336 (45%), Positives = 192/336 (57%), Gaps = 54/336 (16%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           + L LL+VL     AW S+   +     SM ER E+W+ QY REY   DE  +R+ I+  
Sbjct: 10  ICLALLFVLA----AWASQATARSLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKD 65

Query: 89  NVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPA 144
           NV  I+  N + + S+KL+ N+FADL+NEEF ++   +          S +Y     +P+
Sbjct: 66  NVARIESFNKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYENVTAVPS 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWRK+GAVTP+KDQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+Q
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---- 260
           GC                      +YPY G +  C   K  H A  I GYE +PA     
Sbjct: 186 GCT---------------------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 224

Query: 261 ------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                               FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKN
Sbjct: 225 LQKAVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 284

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SW T WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 285 SWSTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 319


>gi|58531896|gb|AAW78660.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 186/311 (59%), Gaps = 35/311 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E +E W   ++    S DE  +RF ++ +NV Y+   N ++  +KL  NKFAD++N EF 
Sbjct: 36  ELYERWRSHHTVSR-SLDEKDKRFNVFKANVHYVHNFNKKDKPYKLKLNKFADMTNHEFR 94

Query: 120 STYLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
             Y G    ++     + +  G         +P SVDWRK+GAVTPVKDQG+CGSCWAFS
Sbjct: 95  HHYAGSKIKHHRSFLGASRANGTFMYANVEDVPPSVDWRKKGAVTPVKDQGKCGSCWAFS 154

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
            V AVEGIN++KT +LVSLSEQELVDCD  S+NQGCNGG M+ AFEFI K GG+ TE++Y
Sbjct: 155 TVVAVEGINQIKTNELVSLSEQELVDCDT-SQNQGCNGGLMDMAFEFIKKKGGINTEENY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY  +   C   K     V+I GYE +P                          FQ YS 
Sbjct: 214 PYMAEGGECDIQKRNSPVVSIDGYEDVPPNDEDSLLKAVANQPVSVAIQASGSDFQFYSE 273

Query: 269 GVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGV +VGYG    G KYW+V+NSWG  WGE GYIRM R   +   G+C
Sbjct: 274 GVFTGDCGTELDHGVAIVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQREIDAEE-GLC 332

Query: 328 GILMQASYPVK 338
           GI MQ SYP+K
Sbjct: 333 GIAMQPSYPIK 343


>gi|297740489|emb|CBI30671.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/338 (45%), Positives = 205/338 (60%), Gaps = 42/338 (12%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M L + ++ + LL ++G+ A   S+   +     SM ER E+W+  Y R Y    E +RR
Sbjct: 1   MALESKIICITLL-IMGVWA---SQALSRTLHEVSMSERHEDWMGLYGRTYKDIAEKERR 56

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL 142
           F I+  NV+YI+ +N     FK + N + ++S+    S    +       R+ +V    +
Sbjct: 57  FKIFKENVEYIESVNK----FKASRNGY-NMSSRPRSSEITSF-------RYENVA--AV 102

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P+S+DWRK+GAVTP+KDQGQCG CWAFSAVAA+EG+ +LKTG+L+SLSEQELVDCD + E
Sbjct: 103 PSSMDWRKKGAVTPIKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELVDCDTSGE 162

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           +QGC GG M+ AFEFI   GG+TTE +YPY+G +  C   K    A  I  YE +PA   
Sbjct: 163 DQGCGGGLMDSAFEFIIGNGGLTTEANYPYKGVDATCNKKKAASSAAKIKNYEDVPANSE 222

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLV 299
                                 FQ YS GVF   CG +L+HGVT VGYG+ D G KYWLV
Sbjct: 223 AALLKAVAQHPVSVAIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGKTDDGTKYWLV 282

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GYI M R+   ++ G+CGI M+ASYP 
Sbjct: 283 KNSWGTGWGEDGYIWMERD-IGADEGLCGIAMEASYPT 319


>gi|1223922|gb|AAA92063.1| cysteinyl endopeptidase [Vigna radiata]
          Length = 362

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/315 (47%), Positives = 188/315 (59%), Gaps = 35/315 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W   ++    S  E  +RF ++  NV ++   N  +  +KL  NKFAD++N
Sbjct: 34  ESLWDLYERWRSHHTVSR-SLTEKHKRFNVFKENVMHVHNTNKMDKPYKLKLNKFADMTN 92

Query: 116 EEFISTYLG----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF STY G    ++K +   +  +  ++      +PASVDWRK+GAVT VKDQGQCGSC
Sbjct: 93  HEFRSTYAGSKVNHHKMFRGTQHGNGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN++KT KLVSLSEQELVDCD   ENQGCNGG ME AFEFI + GG+TT
Sbjct: 153 WAFSTVVAVEGINQIKTDKLVSLSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGITT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E +YPY  +   C   K    AV+I G+E +P                          FQ
Sbjct: 212 ESNYPYTAQEGTCDASKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQ 271

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GV    C   LNHGV +VGYG    G  YW+V+NSWG  WGE GYIRM RN  S  
Sbjct: 272 FYSEGVLTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRN-ISKK 330

Query: 324 IGICGILMQASYPVK 338
            G+CGI M ASYP+K
Sbjct: 331 EGLCGIAMMASYPIK 345


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 139/310 (44%), Positives = 192/310 (61%), Gaps = 33/310 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL--SFKLTDNKFADLSNEEFI 119
           +E WL ++ R Y +  E  RRF ++  N++++D  N +     F+L  N+FADL+N+EF 
Sbjct: 109 YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 168

Query: 120 STYLGYNKPYNEPRWPSV----QYLG----LPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           + YLG   P +  R  +V    ++ G    LP SVDWR++GAV PVK+QGQCGSCWAFSA
Sbjct: 169 AAYLGARIPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWAFSA 228

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           V++VE +N++ TG++V+LSEQELV+C  +  N GCNGG M+ AF+FI K GG+ TE DYP
Sbjct: 229 VSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYP 288

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y+  + +C  ++     V+I G+E +P                          FQLY  G
Sbjct: 289 YKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKAG 348

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           VF   C   L+HGV  VGYG ++G+ YW+V+NSWG  WGE GYIRM RN  ++  G CGI
Sbjct: 349 VFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNV-NATTGKCGI 407

Query: 330 LMQASYPVKR 339
            M ASYP K+
Sbjct: 408 AMMASYPTKK 417


>gi|318136892|gb|ADV41672.1| cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 206/342 (60%), Gaps = 39/342 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L+LF ++ LG+     +   P  Y+  SM  R + W+  + + Y   +E + RF I+  N
Sbjct: 12  LALFFIF-LGVWRSQVASSRPINYEA-SMRARHDQWIAHHDKVYKDLNEKEMRFKIFKEN 69

Query: 90  VQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGY----------NKPYNEPRWPSVQ 138
           V+ I+  N+ ++  +KL  NKF+DL+NE+F   + GY          +KP    R+ +V 
Sbjct: 70  VERIEAFNAGEDKGYKLGVNKFSDLTNEKFRVLHTGYKRSHPKVMSSSKPKTHFRYANVT 129

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              +P ++DWRK+GAVTP+KDQ +CG CWAFSAVAA EG+++LKTGKL+ LSEQELVDCD
Sbjct: 130 --DIPPTMDWRKKGAVTPIKDQKECGCCWAFSAVAATEGLHQLKTGKLIPLSEQELVDCD 187

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
           V  E++GC+GG ++ AF+FI K  G+TTE +YPY+G++  C   K+   A  I GYE +P
Sbjct: 188 VEGEDEGCSGGLLDTAFDFILKNKGLTTEANYPYKGEDGVCNKKKSALSAAKIAGYEDVP 247

Query: 259 AR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEK 295
           A                       + FQ YS GVF   C   LNH VT VGYG    G K
Sbjct: 248 ANSEKALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTK 307

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YW++KNSWG+ WG++GY+R+ R+      G+CG+ M ASYP 
Sbjct: 308 YWIIKNSWGSKWGDSGYMRIKRDVHEKE-GLCGLAMDASYPT 348


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/307 (46%), Positives = 190/307 (61%), Gaps = 32/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           +E+WL ++ + Y +  E ++RF I+  N  YID  N+ ++ SFKL  N+FADL+NEE+ S
Sbjct: 44  YESWLVKHGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNRFADLTNEEYRS 103

Query: 121 TYLGYNKPYNEP-------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            Y G     +         R+ S+    LP SVDWR+ GAV  VKDQGQCGSCWAFS ++
Sbjct: 104 KYTGIRTKDSRKKVSGKSQRYASLAGESLPESVDWREHGAVASVKDQGQCGSCWAFSTIS 163

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TGKL++LSEQELVDCD  S N+GCNGG M+ AF+FI   GG+ ++ DYPY 
Sbjct: 164 AVEGINQIATGKLITLSEQELVDCD-RSYNEGCNGGLMDDAFQFIINNGGIDSDADYPYT 222

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVF 271
           G++ +C   +     VTI  YE +P                      +   FQ Y  G+F
Sbjct: 223 GRDGQCDQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQPISVAIEASGRDFQFYDSGIF 282

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV VVGYG ++G+ YW+V+NSWG  WGE GY+RM R   SS  GICGI  
Sbjct: 283 TGKCGTDLDHGVVVVGYGTENGKDYWIVRNSWGADWGEKGYLRMERG-ISSKAGICGITS 341

Query: 332 QASYPVK 338
           + SYPVK
Sbjct: 342 EPSYPVK 348


>gi|302143416|emb|CBI21977.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 145/299 (48%), Positives = 186/299 (62%), Gaps = 30/299 (10%)

Query: 66  LKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +Y R Y   +E ++RF I+  NV  I+  N + + ++KL+ N+FADL+NEEF S    
Sbjct: 1   MARYGRMYKDANEKEKRFKIFKDNVARIESFNKAMDKTYKLSINEFADLTNEEFRSLRNR 60

Query: 125 YNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
           + K +      + +Y     +P+++DWRK+GAVTP+KDQ QCG CWAFSAVAA EGI ++
Sbjct: 61  F-KAHICSEATTFKYENVTAVPSTIDWRKKGAVTPIKDQQQCGCCWAFSAVAATEGITQI 119

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
            TGKL+SLSEQELVDCD   ENQGC+GG M+ AF FI KI G+ +E  YPY G +  C +
Sbjct: 120 TTGKLISLSEQELVDCDTGGENQGCSGGLMDDAFRFI-KIHGLASEATYPYEGDDGTCNS 178

Query: 242 DKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQL 279
            K  H A  I GYE +PA                       + FQ Y+ GVF   CG +L
Sbjct: 179 KKEAHPAAKIKGYEDVPANNEKALQKAVAHQPVAVAIDAGGFEFQFYTSGVFTGQCGTEL 238

Query: 280 NHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +HGV  VGYG  D G  YWLVKNSWGT WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 239 DHGVAAVGYGIGDDGMMYWLVKNSWGTGWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 296


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 198/321 (61%), Gaps = 34/321 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL--SFKLTDN 108
           ++ +P++    +E WL ++ R Y +  E  RRF ++  N++++D  N +     F+L  N
Sbjct: 42  ERTEPEA-RTLYELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMN 100

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSV----QYLG----LPASVDWRKEGAVTPVKDQ 160
           +FADL+N+EF + YLG   P +  R  +V    ++ G    LP SVDWR++GAV PVK+Q
Sbjct: 101 QFADLTNDEFRAAYLGARIPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQ 160

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           GQCGSCWAFSAV++VE +N++ TG++V+LSEQELV+C  +  N GCNGG M+ AF+FI K
Sbjct: 161 GQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIK 220

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE DYPY+  + +C  ++     V+I G+E +P                      
Sbjct: 221 NGGIDTEGDYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEA 280

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
               FQLY  GVF   C   L+HGV  VGYG ++G+ YW+V+NSWG  WGE GYIRM RN
Sbjct: 281 GGREFQLYKAGVFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERN 340

Query: 319 SPSSNIGICGILMQASYPVKR 339
             ++  G CGI M ASYP K+
Sbjct: 341 V-NATTGKCGIAMMASYPTKK 360


>gi|224133764|ref|XP_002321655.1| predicted protein [Populus trichocarpa]
 gi|222868651|gb|EEF05782.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/352 (44%), Positives = 208/352 (59%), Gaps = 44/352 (12%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYP-QKYDPQSME---ERFENWLKQYSREYGSEDEW 79
           M +   ++L+L  VLG     ++E +   + D +S E   + +E W   ++    S DE 
Sbjct: 1   MKKLLFVALYLALVLG-----FTESFDFHEKDLESEESLWDLYEKWRSHHTVST-SLDEK 54

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTY---------LGYNKPYN 130
           ++RF ++ +NV ++   N  +  +KL  NKFAD++N EF + Y         +    P  
Sbjct: 55  RKRFNVFRANVLHVHNTNKMDKPYKLKLNKFADMTNHEFRTAYASSKVKHHTMFRGAPLG 114

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
              +       +PAS+DWRK+GAVTPVKDQG+CGSCWAFS + AVEGIN +KT KL+SLS
Sbjct: 115 NGSFMYGNIDKVPASIDWRKKGAVTPVKDQGKCGSCWAFSTIVAVEGINFIKTNKLISLS 174

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDC+   EN GCNGG M+ AFEFITK  G+TTE +YPYR ++  C  +K    AV+
Sbjct: 175 EQELVDCNT-GENHGCNGGLMDYAFEFITKQKGITTEANYPYRAQDGHCDANKANQPAVS 233

Query: 251 ITGYEAI---------------PARYA-------FQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I G+E +               P   A       FQ YS GVF   CG +L+HGV +VGY
Sbjct: 234 IDGHEDVLHNNENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGECGKELDHGVAIVGY 293

Query: 289 GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           G    G KYW+V+NSWG  WGE GYIRM R   S   G+CGI M+ASYP+K+
Sbjct: 294 GTTVDGTKYWIVRNSWGPEWGERGYIRMQR-GISDRRGLCGIAMEASYPIKK 344


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 197/321 (61%), Gaps = 34/321 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL--SFKLTDN 108
           ++ +P++    +E WL ++ R Y +  E  RRF ++  N++++D  N +     F+L  N
Sbjct: 39  ERTEPEA-RTLYELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMN 97

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSV----QYLG----LPASVDWRKEGAVTPVKDQ 160
           +FADL+N+EF + YLG   P    R  +V    ++ G    LP SVDWR++GAV PVK+Q
Sbjct: 98  QFADLTNDEFRAAYLGARIPAARRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQ 157

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           GQCGSCWAFSAV++VE +N++ TG++V+LSEQELV+C  +  N GCNGG M+ AF+FI K
Sbjct: 158 GQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIK 217

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE DYPY+  + +C  ++     V+I G+E +P                      
Sbjct: 218 NGGIDTEGDYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEA 277

Query: 261 --YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
               FQLY  GVF   C   L+HGV  VGYG ++G+ YW+V+NSWG  WGE GYIRM RN
Sbjct: 278 GGREFQLYKAGVFSGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERN 337

Query: 319 SPSSNIGICGILMQASYPVKR 339
             ++  G CGI M ASYP K+
Sbjct: 338 V-NATTGKCGIAMMASYPTKK 357


>gi|146215986|gb|ABQ10195.1| actinidin Act2d [Actinidia eriantha]
          Length = 381

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 155/347 (44%), Positives = 206/347 (59%), Gaps = 32/347 (9%)

Query: 21  MRMMLRNAVLSLFLLW---VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSED 77
           M+M    +V+S+ LL+   +L + +    +   Q+ + Q M   +E+WL +  + Y S D
Sbjct: 1   MKMGSPKSVISMSLLFFSTLLILSSALDIKNSVQRTNDQVMA-MYESWLVEQGKSYNSLD 59

Query: 78  EWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPR 133
           E + RF I+  N++ ID  N+  N S+ L  N+FADL++EE+ STYLG+    K     R
Sbjct: 60  EKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGFKSGPKAKVSNR 119

Query: 134 WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           +     + LP  VDWR  GAV  VKDQG C SCWAFSAVAAVEGINK+ TG L+SLSEQE
Sbjct: 120 YVPKVGVVLPNYVDWRTVGAVVGVKDQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQE 179

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDC      +GCN GYM  AF+FI   GG+ TED+YPY  ++ +C   +     VTI  
Sbjct: 180 LVDCGRTQRTRGCNRGYMNDAFQFIIDNGGINTEDNYPYTAQDGQCDWYRKNQRYVTIDN 239

Query: 254 YEAIPARY----------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           YE +PA                         F+LY+ G++  YCG  ++HGVT+VGYG +
Sbjct: 240 YEQLPANNEWVLQNAVAYQPITVGLESEGGKFKLYTSGIYTGYCGTAIDHGVTIVGYGTE 299

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            G  YW+VKNSWGT+WGE GYIR+ RN   +  G CGI M  SYPVK
Sbjct: 300 RGLDYWIVKNSWGTNWGENGYIRIQRNIGGA--GKCGIAMVPSYPVK 344


>gi|356543114|ref|XP_003540008.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1-like [Glycine max]
          Length = 343

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/319 (46%), Positives = 192/319 (60%), Gaps = 35/319 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNK 109
           +K    SM ER E W+++Y + Y    E Q+RF I+ +NV++I+  N+  N  +KL+ N 
Sbjct: 27  RKLHDASMYERHEQWMEKYGKVYKDSAEMQKRFLIFENNVEFIESFNAAGNKPYKLSINH 86

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSVQ-------YLGLPASVDWRKEGAVTPVKDQGQ 162
            AD +NEEF++++ GY   + +    + Q          +P +VDWR++G VT +KDQ Q
Sbjct: 87  LADQTNEEFMASHKGYKGSHWQGLRITTQTPFKYENVTDIPWAVDWRQKGDVTSIKDQAQ 146

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CG+CWAFSAVAA EGI ++ TG LVSLSE+ELVDCD  S + GC+GG ME  FEFI K G
Sbjct: 147 CGNCWAFSAVAATEGIYQITTGNLVSLSEKELVDCD--SVDHGCDGGLMEHGFEFIIKNG 204

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+++E +YPY   N  C T+K       ITGYE +P                        
Sbjct: 205 GISSEANYPYTAVNGTCDTNKEASPVAQITGYETVPVNCEEELQKAVANQLTMSVSIDAG 264

Query: 261 -YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARN 318
             AFQ Y  GVF   CG QL+HGVT VGYG  D+G +YW+VKNSWGT WGE GYIRM R 
Sbjct: 265 GSAFQFYPSGVFTGQCGTQLDHGVTAVGYGSTDYGTQYWIVKNSWGTQWGEEGYIRMLRG 324

Query: 319 SPSSNIGICGILMQASYPV 337
             +   G+CGI M ASYP 
Sbjct: 325 IDAQE-GLCGIAMDASYPT 342


>gi|414591545|tpg|DAA42116.1| TPA: hypothetical protein ZEAMMB73_388689 [Zea mays]
          Length = 384

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/325 (46%), Positives = 188/325 (57%), Gaps = 43/325 (13%)

Query: 56  QSMEERFENWLKQYSR---EYGSEDEWQ-RRFGIYSSNVQYIDYINSQN-LSFKLTDNKF 110
           +S+   +E W   Y R     G + + Q RRF ++  N +Y+   N ++   F+L  NKF
Sbjct: 35  ESLRALYERWRSHYHRVSPRDGDDKQQQARRFNVFKENARYVHEANRKDGRPFRLALNKF 94

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-------------LPASVDWRKEGAVTPV 157
           AD++ +EF  TY G    ++  +    +                LP +VDWR  GAVT V
Sbjct: 95  ADMTTDEFRRTYAGSRTRHHRAQLGEARSFAHAQHGRGGSGTTNLPPAVDWRLRGAVTGV 154

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           KDQGQCGSCWAFSA+AAVEG+NK+ TGKLVSLSEQELVDCD + +NQGC+GG M+ AF++
Sbjct: 155 KDQGQCGSCWAFSAIAAVEGVNKIMTGKLVSLSEQELVDCD-DVDNQGCDGGLMDYAFQY 213

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------- 260
           I + GGVTTE +YPY  +   C   K + H VTI GYE +PA                  
Sbjct: 214 IQRNGGVTTESNYPYLAEQRSCNKAKERSHDVTIDGYEDVPANNEDALQKAVASQPVAVA 273

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIR 314
                  FQ YS GVF   CG  L+HGV  VGYG    G KYW VKNSWG  WGE GYIR
Sbjct: 274 IEASGQDFQFYSEGVFTGSCGTDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIR 333

Query: 315 MARNSPSSNIGICGILMQASYPVKR 339
           M R  P S  G+CGI M+ SYP K+
Sbjct: 334 MQRGVPDSR-GLCGIAMEPSYPTKK 357


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 189/319 (59%), Gaps = 36/319 (11%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFA 111
           Y    +   +E WL ++ + Y    +  +RF ++  N+ +I ++ N+ N ++KL  NKFA
Sbjct: 29  YTDNEVMAMYEEWLVRHQKGYNELGKKDKRFQVFKDNLGFIQEHNNNLNNTYKLGLNKFA 88

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYLG----------LPASVDWRKEGAVTPVKDQG 161
           D++NEE+ + YLG  K   + R    +  G          LP  VDWR +GAV P+KDQG
Sbjct: 89  DMTNEEYRAMYLG-TKSNAKRRLMKTKSTGHRYAFSARDRLPVHVDWRMKGAVAPIKDQG 147

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCWAFS VA VE INK+ TGK VSLSEQELVDCD  + N+GCNGG M+ AFEFI + 
Sbjct: 148 SCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCD-RAYNEGCNGGLMDYAFEFIIQN 206

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------A 259
           GG+ T+ DYPYRG +  C   K     V I GYE +P                      +
Sbjct: 207 GGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGYEDVPPYDENALKKAVAHQPVSVAIEAS 266

Query: 260 RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             A QLY  GVF   CG  L+HGV VVGYG ++G  YWLV+NSWGT WGE GY +M RN 
Sbjct: 267 GRALQLYQSGVFTGKCGTSLDHGVVVVGYGSENGVDYWLVRNSWGTGWGEDGYFKMQRNV 326

Query: 320 PSSNIGICGILMQASYPVK 338
            +S  G CGI M+ASYPVK
Sbjct: 327 RTST-GKCGITMEASYPVK 344


>gi|363814535|ref|NP_001242660.1| uncharacterized protein LOC100807362 precursor [Glycine max]
 gi|255636658|gb|ACU18666.1| unknown [Glycine max]
          Length = 367

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/369 (40%), Positives = 209/369 (56%), Gaps = 51/369 (13%)

Query: 1   MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEE 60
           +   + I ++T L +  A+DM ++                   ++   +  K   +S EE
Sbjct: 7   LMATILIVLFTVLAVSSALDMSII-------------------SYDRSHADKSGWKSDEE 47

Query: 61  R---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
               +E WL ++ + Y + +E ++RF I+  N+ +I+  N+ N ++K+  N+F+DLSNEE
Sbjct: 48  VMSIYEEWLVKHGKVYNAVEEKEKRFQIFKDNLNFIEEHNAVNRTYKVGLNRFSDLSNEE 107

Query: 118 FISTYLGYN-KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           + S YLG    P      PS +Y       LP SVDWRKEGAV  VK+Q +C  CWAFSA
Sbjct: 108 YRSKYLGTKIDPSRMMARPSRRYSPRVADNLPESVDWRKEGAVVRVKNQSECEGCWAFSA 167

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +AAVEGINK+ TG L +LSEQEL+DCD  + N GC+GG ++ AFEFI   GG+ TE+DYP
Sbjct: 168 IAAVEGINKIVTGNLTALSEQELLDCD-RTVNAGCSGGLVDYAFEFIINNGGIDTEEDYP 226

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHG 269
           ++G +  C   K    AVTI GYE +PA                         FQLY  G
Sbjct: 227 FQGADGICDQYKINARAVTIDGYERVPAYDELALKKAVANQPVSVAIEAYGKEFQLYESG 286

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           +F   CG  ++HGVT VGYG ++G  YW+VKNSWG +WGEAGY+ M RN      G CGI
Sbjct: 287 IFTGTCGTSIDHGVTAVGYGTENGIDYWIVKNSWGENWGEAGYVGMERNIAEDTAGKCGI 346

Query: 330 LMQASYPVK 338
            +   YP+K
Sbjct: 347 AILTLYPIK 355


>gi|115479933|ref|NP_001063560.1| Os09g0497500 [Oryza sativa Japonica Group]
 gi|113631793|dbj|BAF25474.1| Os09g0497500 [Oryza sativa Japonica Group]
 gi|215704298|dbj|BAG93138.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 349

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 185/324 (57%), Gaps = 46/324 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M +RFE W+ ++ R Y    E QRRF +Y  NV+ ++  NS +  +KL DNKFADL+NEE
Sbjct: 27  MLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSNGYKLADNKFADLTNEE 86

Query: 118 FISTYLGYNKPYNEPRWPS-----VQYLG------LPASVDWRKEGAVTPVKDQGQCGSC 166
           F +  LG+      P+  +     +   G      LP SVDWRK+GAV  VK+QG CGSC
Sbjct: 87  FRAKMLGFRPHVTIPQISNTCSADIAMPGESSDDILPKSVDWRKKGAVVEVKNQGDCGSC 146

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA+EGIN++K G+LVSLSEQELVDCD   E  GC GGYM  AFEF+    G+TT
Sbjct: 147 WAFSAVAAIEGINQIKNGELVSLSEQELVDCD--DEAVGCGGGYMSWAFEFVVGNHGLTT 204

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-------ARYA---------------FQ 264
           E  YPY   N  CQ  K    AV I GY  +        AR A               FQ
Sbjct: 205 EASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGSFMFQ 264

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK-----------YWLVKNSWGTSWGEAGYI 313
           LY  GV+   C   +NHGVTVVGYGE   +            YW+VKNSWG  WG+AGYI
Sbjct: 265 LYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGDAGYI 324

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
            M R+      G+CGI +  SYPV
Sbjct: 325 LMQRDVAGLASGLCGIALLPSYPV 348


>gi|449447027|ref|XP_004141271.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 458

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 154/352 (43%), Positives = 208/352 (59%), Gaps = 43/352 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREY---GSED 77
           M     + +++L     + + A + S   PQ+ D + M   ++ W  ++ + +   G+E 
Sbjct: 1   MGTFQSSPIMALLFFLFIALSAASPSSIIPQRTDDEVMA-LYDQWRAKHGKLHNNLGAEP 59

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR-WPS 136
           E   RF I+  N+++ID IN+QNL ++L  N FADL+NEE+ S YLG        R   S
Sbjct: 60  E--NRFHIFKDNLKFIDEINAQNLPYRLGLNVFADLTNEEYRSRYLGGKFASGSRRNRTS 117

Query: 137 VQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSE 191
            +YL      LP S+DWR +GAV PVKDQG CGSCWAFS VA+VE IN++ TG L++LSE
Sbjct: 118 NRYLPRLGDDLPDSIDWRAKGAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSE 177

Query: 192 QELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTI 251
           QELVDCD  S N+GCNGG M+ AFEFI + GG+ TE+DYPY G +  C     ++    I
Sbjct: 178 QELVDCD-RSYNEGCNGGLMDYAFEFIIENGGLDTEEDYPYYGFDSSC----IQYKKNAI 232

Query: 252 TGYEAIPAR-------------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
            GYE +P                            +FQLY  G+F   CG  L+HGV VV
Sbjct: 233 DGYEDVPVNNEKALQKAVSKQVVSVVSVAIEGGGRSFQLYQSGIFTGRCGTDLDHGVNVV 292

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG + G  YW+V+NSWG SWGE+GY++M RN  +S  G+CGI M+ SYP K
Sbjct: 293 GYGSEGGVDYWIVRNSWGGSWGESGYVKMQRNI-ASPTGLCGIAMEPSYPTK 343


>gi|218202087|gb|EEC84514.1| hypothetical protein OsI_31214 [Oryza sativa Indica Group]
          Length = 348

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 140/308 (45%), Positives = 186/308 (60%), Gaps = 32/308 (10%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +N  +I+  N+ N  F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANAAFIESFNAGNHKFWLGVNQFADL 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF  T        +  R P+      V    LPA++DWR +G VTP+KDQGQCG CW
Sbjct: 89  TNDEFRLTKTNKGFIPSTTRVPTGFRYENVNIDALPATMDWRTKGVVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 208

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+C++    +   +I GYE +PA                         FQ 
Sbjct: 209 SNYPYAAADDKCKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGDDMTFQF 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWG +WGE G++RM ++  S   
Sbjct: 267 YKGGVMIGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGMTWGENGFLRMEKD-ISDKR 325

Query: 325 GICGILMQ 332
           G+CG+ M+
Sbjct: 326 GMCGLAME 333


>gi|218202389|gb|EEC84816.1| hypothetical protein OsI_31898 [Oryza sativa Indica Group]
          Length = 350

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 185/324 (57%), Gaps = 46/324 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M +RFE W+ ++ R Y    E QRRF +Y  NV+ ++  NS +  +KL DNKFADL+NEE
Sbjct: 28  MLDRFEQWMIRHGRAYTDSGEKQRRFEVYRRNVELVETFNSMSNGYKLADNKFADLTNEE 87

Query: 118 FISTYLGYNKPYNEPRWPS-----VQYLG------LPASVDWRKEGAVTPVKDQGQCGSC 166
           F +  LG+      P+  +     +   G      LP SVDWRK+GAV  VK+QG CGSC
Sbjct: 88  FRAKMLGFRPHVTIPQISNTCSADIAMPGESSDDILPKSVDWRKKGAVVEVKNQGDCGSC 147

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAA+EGIN++K G+LVSLSEQELVDCD   E  GC GGYM  AFEF+    G+TT
Sbjct: 148 WAFSAVAAIEGINQIKNGELVSLSEQELVDCD--DEAVGCGGGYMSWAFEFVVGNHGLTT 205

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-------ARYA---------------FQ 264
           E  YPY   N  CQ  K    AV I GY  +        AR A               FQ
Sbjct: 206 EASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGSFMFQ 265

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK-----------YWLVKNSWGTSWGEAGYI 313
           LY  GV+   C   +NHGVTVVGYGE   +            YW+VKNSWG  WG+AGYI
Sbjct: 266 LYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGDAGYI 325

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
            M R+      G+CGI +  SYPV
Sbjct: 326 LMQRDVAGLASGLCGIALLPSYPV 349


>gi|194352760|emb|CAQ00108.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326510977|dbj|BAJ91836.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326523875|dbj|BAJ96948.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528631|dbj|BAJ97337.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 143/347 (41%), Positives = 199/347 (57%), Gaps = 54/347 (15%)

Query: 43  GAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--- 99
           G+ +   P   D   M +RF  W  ++SR Y + +E + R  +Y+ N++YI+  N     
Sbjct: 23  GSSATSRPATEDADPMAQRFRRWKAEHSRTYATPEEERHRLRVYARNMRYIEATNGDAGA 82

Query: 100 NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR----------------------WPSV 137
            L+++L +  + DL+++EF + Y     P ++                        W  V
Sbjct: 83  GLTYELGETAYTDLTSDEFTAMYTSRAPPLSDDDDDLPMTMITTRAGPVAAAGGGGWLQV 142

Query: 138 ---QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
              +  G PASVDWR+ GAVT VK+QGQCGSCWAFS VA +EGI+++KTGKL SLSEQEL
Sbjct: 143 YVNESAGAPASVDWRERGAVTAVKNQGQCGSCWAFSTVAVIEGIHQIKTGKLASLSEQEL 202

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD    + GCNGG   +A ++IT  GG+T++DDYPY  K+D C T K  HHA +I+G+
Sbjct: 203 VDCD--KLDHGCNGGVSYRALQWITSNGGITSQDDYPYTAKDDTCDTKKLSHHAASISGF 260

Query: 255 EAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           + +  R                        FQ Y +GV++  CG +LNHGVTVVGYGED 
Sbjct: 261 QRVATRSELSLTNAVAMQPVAVSIEAGGANFQHYRNGVYNGPCGTRLNHGVTVVGYGEDE 320

Query: 293 --GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             GE YW+VKNSWG  WG+ GY+RM +       GICGI ++ S+P+
Sbjct: 321 VTGESYWIVKNSWGEKWGDNGYLRMKKGIIDKPEGICGIAIRPSFPL 367


>gi|357467173|ref|XP_003603871.1| Cysteine proteinase [Medicago truncatula]
 gi|355492919|gb|AES74122.1| Cysteine proteinase [Medicago truncatula]
 gi|388499154|gb|AFK37643.1| unknown [Medicago truncatula]
          Length = 350

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/348 (44%), Positives = 204/348 (58%), Gaps = 35/348 (10%)

Query: 22  RMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDE 78
           + ++    L LFL    G        GY  + D +SM+   E FE+W+ ++ + Y + +E
Sbjct: 7   KTLVLTCSLCLFLSLAFGRDFSIV--GYSSE-DLKSMDKLIELFESWMSRHGKIYETIEE 63

Query: 79  WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
              RF ++  N+++ID  N    ++ L  N+FADLS++EF + YLG     ++ R  S +
Sbjct: 64  KLLRFEVFKDNLKHIDDRNKVVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRESSEE 123

Query: 139 Y-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
                 + LP SVDWRK+GAVTPVK+QGQCGSCWAFS VAAVEGIN++ TG L SLSEQE
Sbjct: 124 EFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQE 183

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           L+DCD  + N GCNGG M+ AF FI K GG+  E+DYPY  +   C+  K     VTI G
Sbjct: 184 LIDCDT-TYNNGCNGGLMDYAFSFIVKNGGLHKEEDYPYIMEESTCEMKKEVSEVVTING 242

Query: 254 YEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           Y  +P                      +   FQ YS GVFD +CG +L+HGV+ VGYG  
Sbjct: 243 YHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGSELDHGVSAVGYGTS 302

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
            G  Y +VKNSWG  WGE G+IRM RN   S  GICG+   ASYP K+
Sbjct: 303 KGLDYIIVKNSWGAKWGEKGFIRMKRNIGKSE-GICGLYKMASYPTKK 349


>gi|537437|gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
          Length = 359

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 212/350 (60%), Gaps = 45/350 (12%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQK--YDPQSMEERFENWLKQY--SREYGSEDEWQ 80
           L  A+LS+ L  VLG  A A S  + +K     +S+   +E W   +  SR+    D+  
Sbjct: 4   LSYALLSVVL--VLGSVALAQSIPFDEKDLASEESLWSLYEKWRAHHAVSRDL---DDTD 58

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPY--------NE 131
           +RF ++  NV++I   N  ++ ++KL  NKF D++N+EF STY G    +        + 
Sbjct: 59  KRFNVFKENVKFIHEFNQKKDATYKLALNKFGDMTNQEFRSTYAGSKIDHHMTLRGVKDA 118

Query: 132 PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSE 191
             +   ++  LP SVDWR++GAVT VKDQGQCGSCWAFS V AVEGIN++KT +LVSLSE
Sbjct: 119 GEFSYEKFHDLPTSVDWREKGAVTGVKDQGQCGSCWAFSTVVAVEGINQIKTNELVSLSE 178

Query: 192 QELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTI 251
           Q+LVDCD  ++N GCNGG M+ AF+FI   GG+++ED YPY  +   C ++      VTI
Sbjct: 179 QQLVDCD--TKNSGCNGGLMDYAFDFIKNNGGLSSEDSYPYLAEQKSCGSE-ANSAVVTI 235

Query: 252 TGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
            GY+ +P                      + YAFQ YS GVF  +CG +L+HGV  VGYG
Sbjct: 236 DGYQDVPRNNEAALMKAVANQPVSVAIEASGYAFQFYSQGVFSGHCGTELDHGVAAVGYG 295

Query: 290 -EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            +D G+KYW+VKNSWG  WGE+GYIRM R       G CGI M+ASYP+K
Sbjct: 296 VDDDGKKYWIVKNSWGEGWGESGYIRMERGIKDKR-GKCGIAMEASYPIK 344


>gi|297794671|ref|XP_002865220.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
 gi|297311055|gb|EFH41479.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 209/372 (56%), Gaps = 67/372 (18%)

Query: 1   MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEE 60
           MQ  LF+AI+++ +  I++     L N ++                           M++
Sbjct: 6   MQIFLFVAIFSSFYFSISLSRP--LDNELI---------------------------MQK 36

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSNEEF 118
           R   W+ ++ R Y    E   R+ ++ SNV+ I+++N+     +FKL  N+FADL+N+EF
Sbjct: 37  RHIEWMTKHGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAGRTFKLAVNQFADLTNDEF 96

Query: 119 ISTYLGYN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            S Y G+                 R+ +V    LP SVDWR +GAVTP+K+QG CG CWA
Sbjct: 97  RSMYTGFKGVSSLSSQSQTKTTSFRYQNVSSGALPISVDWRTKGAVTPIKNQGSCGCCWA 156

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAA+EG  ++K GKL+SLSEQ+LVDCD N  + GC GG M+ AFE I   GG+TTE 
Sbjct: 157 FSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCEGGLMDTAFEHIMATGGLTTES 214

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           +YPY+G++  C + KT   A +ITGYE +P                        + FQ Y
Sbjct: 215 NYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDFQFY 274

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           S GVF   C   L+H VT +GYG+  +G KYW++KNSWGT WGE+GY+R+ ++      G
Sbjct: 275 SSGVFTGECTTYLDHAVTAIGYGQSTNGSKYWIIKNSWGTKWGESGYMRIQKDIKDKQ-G 333

Query: 326 ICGILMQASYPV 337
           +CG+ M+ASYP 
Sbjct: 334 LCGLAMKASYPT 345


>gi|171702829|dbj|BAG16370.1| cysteine protease [Brassica oleracea var. italica]
          Length = 332

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 190/314 (60%), Gaps = 38/314 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFA 111
           D  +M++R   W+ ++ R Y   +E   R+ ++  NV+ I+ +N     L+FKL  N+FA
Sbjct: 23  DEVTMQKRHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFA 82

Query: 112 DLSNEEFISTYLGY---------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           DL+NEEF S Y GY          KP    R+  V    LP SVDWRK+GAVTP+KDQG 
Sbjct: 83  DLTNEEFRSMYTGYKGNSVLSSRTKP-TSFRYQHVSSDALPISVDWRKKGAVTPIKDQGS 141

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFSAVAA+EG+ ++K GKL+SLSEQELVDCD N +  GC GGYM  AF +    G
Sbjct: 142 CGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDD--GCMGGYMNSAFNYTMTTG 199

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+T+E +YPY+  +  C  +KTK  A +I G+E +PA                       
Sbjct: 200 GLTSESNYPYKSTDGTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGG 259

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF   C   L+HGV VVGYG+  +G KYW++KNSWG  WGE GY+R+ +++
Sbjct: 260 TGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGERGYMRIKKDT 319

Query: 320 PSSNIGICGILMQA 333
            + + G CG+ M A
Sbjct: 320 KAKH-GQCGLAMNA 332


>gi|4100157|gb|AAD10337.1| cysteine proteinase precursor [Hordeum vulgare]
          Length = 365

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/317 (47%), Positives = 187/317 (58%), Gaps = 37/317 (11%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+   +E W   Y  SR     D  +RRF ++  N +Y+   N +++ F+L  NKFAD+
Sbjct: 35  ESLRGLYERWRSHYTVSRRGLGADAGERRFNVFKQNARYVHEGNKRDMPFRLALNKFADM 94

Query: 114 SNEEFISTYLGYNKPYN---------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           + +EF  TY G    ++         +  +       LP +VDWR++GAVT +KDQGQCG
Sbjct: 95  TTDEFRRTYAGSRVRHHLSLSGGRRGDGGFRYGDADNLPPAVDWRQKGAVTAIKDQGQCG 154

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS + AVEGINK++TGKLVSLSEQEL+DCD N  NQGC+GG M+ AF+FI K  G+
Sbjct: 155 SCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD-NVNNQGCDGGLMDYAFQFIQK-NGI 212

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+G+   C   K    AVTI GYE +PA                         
Sbjct: 213 TTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGQD 272

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R   S
Sbjct: 273 FQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGV-S 331

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI MQASYP K
Sbjct: 332 QTEGLCGIAMQASYPTK 348


>gi|60100207|gb|AAX13273.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 183/318 (57%), Gaps = 35/318 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK--LTDNKFA 111
           D  +M +R E W+ ++ R Y  + E  RR  ++  NV +I+ +N+     K  L +N+FA
Sbjct: 32  DAAAMAQRHERWMAKHGRAYADDAEKARRLEVFRDNVAFIESVNAAASQHKFWLEENQFA 91

Query: 112 DLSNEEFISTYLGY-------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           DL+N EF +T  G        N+     R+ +V    LPASVDWR +GAV PVKDQG CG
Sbjct: 92  DLTNAEFRATRTGLRPSSSRGNRAPTSFRYANVSTGDLPASVDWRGKGAVNPVKDQGDCG 151

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAA+EG  KL TGKLVSLSEQ+LV CDV  E+QGC GG M+ AF+FI K GG+
Sbjct: 152 CCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGL 211

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
             E DYPY   +D+C T      A TI GYE +PA                         
Sbjct: 212 AAESDYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRH 271

Query: 263 FQLYSHGVFDEY--CGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
           FQ Y  GV      C  +L+H +T VGYG    G KYWL+KNSWGTSWGE GY+RM R  
Sbjct: 272 FQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMERGV 331

Query: 320 PSSNIGICGILMQASYPV 337
                G+CG+ M ASYP 
Sbjct: 332 ADKE-GVCGLAMMASYPT 348


>gi|2224812|emb|CAB09699.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/317 (47%), Positives = 187/317 (58%), Gaps = 37/317 (11%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+   +E W   Y  SR     D  +RRF ++  N +Y+   N +++ F+L  NKFAD+
Sbjct: 35  ESLRGLYERWRSHYTVSRRGLGADAEERRFNVFKQNARYVHEGNKRDMPFRLALNKFADM 94

Query: 114 SNEEFISTYLGYNKPYN---------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           + +EF  TY G    ++         +  +       LP +VDWR++GAVT +KDQGQCG
Sbjct: 95  TTDEFRRTYAGSRVRHHLSLSGGRRGDGGFRYGDADNLPPAVDWRQKGAVTAIKDQGQCG 154

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS + AVEGINK++TGKLVSLSEQEL+DCD N  NQGC+GG M+ AF+FI K  G+
Sbjct: 155 SCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD-NVNNQGCDGGLMDYAFQFIQK-NGI 212

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+G+   C   K    AVTI GYE +PA                         
Sbjct: 213 TTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGQD 272

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R   S
Sbjct: 273 FQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGV-S 331

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI MQASYP K
Sbjct: 332 QTEGLCGIAMQASYPTK 348


>gi|374530932|gb|AEP83812.2| cysteine endopeptidase EP8 [Secale cereale x Triticum durum]
          Length = 364

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/311 (48%), Positives = 184/311 (59%), Gaps = 37/311 (11%)

Query: 62  FENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E W   Y  SR     D  +RRF ++  N +YI   N ++  F+L  NKFAD++ +EF 
Sbjct: 40  YERWRSHYTVSRRGLGADAEERRFNVFKENARYIHEGNKKDRPFRLALNKFADMTTDEFR 99

Query: 120 STYLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            TY G    ++       +  G         LP +VDWR++GAVT +KDQGQCGSCWAFS
Sbjct: 100 RTYAGSRVRHHLSLSGGRRGDGSFRYGDADNLPPAVDWRQKGAVTAIKDQGQCGSCWAFS 159

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
            + AVEGINK++TGKLVSLSEQEL+DCD N  NQGC+GG M+ AF+FI K  G+TTE +Y
Sbjct: 160 TIVAVEGINKIRTGKLVSLSEQELMDCD-NVNNQGCDGGLMDYAFQFIHK-NGITTESNY 217

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY+G+   C   K K HAVTI GYE +PA                         FQ YS 
Sbjct: 218 PYQGEQGSCDLAKEKAHAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGNDFQFYSE 277

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   C   L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R    +  G C
Sbjct: 278 GVFTGECSTDLDHGVAAVGYGTTRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQAE-GQC 336

Query: 328 GILMQASYPVK 338
           GI MQASYP K
Sbjct: 337 GIAMQASYPTK 347


>gi|297830592|ref|XP_002883178.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329018|gb|EFH59437.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 452

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/348 (43%), Positives = 202/348 (58%), Gaps = 32/348 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER-FENWLKQYSREYGSEDEW 79
           M   +++  L+L +  +L I     S         ++   R +E WL +  + Y    E 
Sbjct: 1   MATPIKSITLALLIFSMLLISLSLGSVTAADTTRNEAEARRMYEQWLVENRKNYNGLGEK 60

Query: 80  QRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
           + RF I++ N++YI+  NS  N +F++   +FADL+N+EF + YL              +
Sbjct: 61  ETRFEIFTDNLKYIEEHNSVPNQTFEVGLTRFADLTNDEFRAIYLRSKMERTRVPVKGER 120

Query: 139 YL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           YL      LP  +DWR +GAV PVKDQG CGSCWAFSA+ AVEGIN++KTG+L+SLSEQE
Sbjct: 121 YLYKVGDTLPDQIDWRAKGAVNPVKDQGNCGSCWAFSAIGAVEGINQIKTGELISLSEQE 180

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR-CQTDKTKHHAVTIT 252
           LVDCD  S N GC GG M+ AF+FI + GG+ TE+DYPY   +D  C +DK     VTI 
Sbjct: 181 LVDCDT-SYNGGCGGGLMDYAFKFIIENGGIDTEEDYPYTATDDNICNSDKKNSRVVTID 239

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +P                         AFQLY  GVF   CG  L+HGV  VGYG 
Sbjct: 240 GYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYKSGVFTGTCGTSLDHGVVAVGYGS 299

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           + G+ YW+V+NSWG++WGE+GY ++ RN   S+ G CG+ M ASYP K
Sbjct: 300 EGGQDYWIVRNSWGSNWGESGYFKLERNIKESS-GKCGVAMMASYPTK 346


>gi|356515046|ref|XP_003526212.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  273 bits (699), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 147/345 (42%), Positives = 201/345 (58%), Gaps = 43/345 (12%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           +  +L+LFL   +GI     S+  P+K    ++ ER ENW+ +Y + Y    E ++RF I
Sbjct: 7   KQHMLALFLFLAVGI-----SQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQI 61

Query: 86  YSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPY---------NEPRWP 135
           +  NV++I+  N+  N  +KL  N  ADL+ EEF  +  G  + Y         N  ++ 
Sbjct: 62  FKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFKDSRNGLKRTYEFSTTTFKLNGFKYE 121

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
           +V    +P ++DWR +GAVTP+KDQG QCG  WAFS +AA EGI+++ TG LVSLSEQEL
Sbjct: 122 NVT--DIPEAIDWRVKGAVTPIKDQGDQCGRFWAFSTIAATEGIHQISTGNLVSLSEQEL 179

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDCD  S + GC GG+ME  FEFI K GG+T+E +YPY+G +  C T         I GY
Sbjct: 180 VDCD--SVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASPVAQIKGY 237

Query: 255 EAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           E +P+                         F  YS G+++  CG  L+HGVT VGYG ++
Sbjct: 238 EIVPSYSEEALKKAVANQPVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTEN 297

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  YW+VKNSWGT WGE GYIRM R   + + GICGI + +SYP 
Sbjct: 298 GTDYWIVKNSWGTQWGEKGYIRMHRGIAAKH-GICGIALDSSYPT 341


>gi|351726339|ref|NP_001237379.1| cysteine proteinase precursor [Glycine max]
 gi|31559526|dbj|BAC77521.1| cysteine proteinase [Glycine max]
 gi|31559528|dbj|BAC77522.1| cysteine proteinase [Glycine max]
          Length = 362

 Score =  273 bits (699), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/317 (47%), Positives = 186/317 (58%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S  + +E W   +  SR  G +    +RF ++ +NV ++   N  +  +KL  NKFAD+
Sbjct: 34  ESFWDLYERWRSHHTVSRSLGDK---HKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADM 90

Query: 114 SNEEFISTYLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G    ++      PR        +   +P SVDWRK GAVT VKDQGQCG
Sbjct: 91  TNHEFRSTYAGSKVNHHRMFQGTPRGNGTFMYEKVGSVPPSVDWRKNGAVTGVKDQGQCG 150

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V AVEGIN++KT KLVSLSEQELVDCD   +N GCNGG ME AFEFI + GG+
Sbjct: 151 SCWAFSTVVAVEGINQIKTNKLVSLSEQELVDCDT-KKNAGCNGGLMESAFEFIKQKGGI 209

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY  ++  C   K    AV+I G+E +PA                         
Sbjct: 210 TTESNYPYTAQDGTCDASKANDLAVSIDGHENVPANDENALLKAVANQPVSVAIDAGGSD 269

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C  +LNHGV +VGYG    G  YW V+NSWG  WGE GYIRM R S S
Sbjct: 270 FQFYSEGVFTGDCSTELNHGVAIVGYGTTVDGTNYWTVRNSWGPEWGEQGYIRMQR-SIS 328

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M ASYP+K
Sbjct: 329 KKEGLCGIAMMASYPIK 345


>gi|15984|emb|CAA34486.1| unnamed protein product [Actinidia deliciosa]
          Length = 380

 Score =  273 bits (698), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 197/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N        EPR+  V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRFGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D      VTI  YE +P  
Sbjct: 186 QNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|242072398|ref|XP_002446135.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
 gi|241937318|gb|EES10463.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
          Length = 338

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 145/337 (43%), Positives = 202/337 (59%), Gaps = 36/337 (10%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FLL +LG  +   S    ++    +M ER ENW+ +Y R Y    E  RRF ++  NV +
Sbjct: 7   FLLAILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEVFKDNVAF 66

Query: 93  IDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-------GLPA 144
           ++  N+ +N  F L  N+FADL+ EEF +   G+ KP +  + P+  +         LP 
Sbjct: 67  VESFNTNKNNKFWLGINQFADLTIEEFKANK-GF-KPISAEKVPTTGFKYENLSVSALPT 124

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWR +GAVTP+K+QGQCG CWAFSAVAA+EGI KL TG L+SLSEQELVDCD +S ++
Sbjct: 125 AVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDE 184

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GC GG+M+ AFEF+ K GG+ T   YPY+  + +C+       A TI G+E +P      
Sbjct: 185 GCEGGWMDSAFEFVIKNGGLATVSSYPYKAVDGKCKGG--SKSAATIKGHEDVPVNDEAA 242

Query: 259 ----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                           +   F LYS GV    CG +L+HG+  +GYG E  G KYW++KN
Sbjct: 243 LMKAVANQPVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKN 302

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           SWGT+WGE G++RM ++  S   G+CG+ M+ SYP +
Sbjct: 303 SWGTTWGEKGFLRMEKD-ISDKQGMCGLAMKPSYPTE 338


>gi|146215984|gb|ABQ10194.1| actinidin Act2c [Actinidia arguta]
          Length = 378

 Score =  273 bits (698), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 196/335 (58%), Gaps = 28/335 (8%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A       +     + + +E+WL +  + Y S DE + RF I+  N
Sbjct: 10  MSLLFFSTLLILSSALDIVNSAQRTNDQVRDMYESWLVEQGKSYNSLDEKEMRFEIFKDN 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWPSVQYLG--LPAS 145
           ++ ID  N+  N SF L  N+FADL++EE+ STYLG+   P  +     V  +G  LP  
Sbjct: 70  LRIIDDHNADANRSFSLGLNRFADLTDEEYRSTYLGFKSGPKAKVSNRYVPKVGDVLPNY 129

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR  GAV  VK+QG C SCWAFSAVAAVEGINK+ TG L+SLSEQELVDC      +G
Sbjct: 130 VDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIMTGNLLSLSEQELVDCGRTQSTRG 189

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY---- 261
           CN GYM  AF+FI   GG+ TED+YPY  ++ +C         VTI  YE +P+      
Sbjct: 190 CNRGYMTDAFQFIINNGGINTEDNYPYTAQDGQCNRYLQNQKYVTIDDYENVPSNNEWAL 249

Query: 262 ------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSW 303
                              F+LY+ G+F +YCG  ++HGVT+VGYG + G  YW+VKNSW
Sbjct: 250 QNAVAHQPVSVGLESEGGKFKLYTSGIFTQYCGTAIDHGVTIVGYGTERGLDYWIVKNSW 309

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GT+WGE GYIR+ RN   +  G CGI   ASYPVK
Sbjct: 310 GTNWGENGYIRIQRNIGGA--GKCGIARMASYPVK 342


>gi|312451836|gb|ADQ85985.1| actinidin [Actinidia chinensis]
          Length = 380

 Score =  273 bits (698), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 196/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNTKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D      VTI  YE +P  
Sbjct: 186 QNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|18413505|ref|NP_567376.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315954|sp|Q9SUT0.1|CPR3_ARATH RecName: Full=Probable cysteine proteinase At4g11310; Flags:
           Precursor
 gi|5596477|emb|CAB51415.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|7267830|emb|CAB81232.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|332657595|gb|AEE82995.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 364

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/308 (47%), Positives = 190/308 (61%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + YGS  E +RR  I+  N+++I+  N++NLS++L    FADLS  E+   
Sbjct: 49  FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEV 108

Query: 122 YLGYNK--PYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G +   P N        R+ +     LP SVDWR EGAVT VKDQG C SCWAFS V 
Sbjct: 109 CHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVG 168

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI K GG+ T++DYPY+
Sbjct: 169 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKLETAYEFIMKNGGLGTDNDYPYK 226

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C    K  +  V I GYE +PA                         FQLY  GV
Sbjct: 227 AVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV 286

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YWLVKNS G +WGEAGY++MARN  +   G+CGI 
Sbjct: 287 FDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPR-GLCGIA 345

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 346 MRASYPLK 353


>gi|226529105|ref|NP_001150196.1| cysteine protease 1 precursor [Zea mays]
 gi|194701798|gb|ACF84983.1| unknown [Zea mays]
 gi|194704800|gb|ACF86484.1| unknown [Zea mays]
 gi|195637480|gb|ACG38208.1| cysteine protease 1 precursor [Zea mays]
 gi|413919895|gb|AFW59827.1| cysteine protease 1 [Zea mays]
          Length = 470

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/326 (44%), Positives = 201/326 (61%), Gaps = 41/326 (12%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGS----EDEWQRRFGIYSSNVQYIDYINSQNLS--FK 104
           ++ +P+ +   ++ WL ++ R Y +    E E  RRF ++  N++++D  N +  +  F+
Sbjct: 47  ERTEPE-VRAMYDLWLAEHGRAYNALGEGEGERDRRFLVFWDNLRFVDAHNERAGARGFR 105

Query: 105 LTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV-----QYLG----LPASVDWRKEGAVT 155
           L  N+FADL+N+EF + YLG   P    R  +V     ++ G    LP SVDWR++GAV 
Sbjct: 106 LGMNQFADLTNDEFRAAYLGAMVP--AARRGAVVGERYRHDGAAEELPESVDWREKGAVA 163

Query: 156 PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAF 215
           PVK+QGQCGSCWAFSAV++VE +N++ TG++V+LSEQELV+C  +  N GCNGG M+ AF
Sbjct: 164 PVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAF 223

Query: 216 EFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------- 260
           +FI K GG+ TEDDYPYR  + +C  ++     V+I G+E +P                 
Sbjct: 224 DFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVS 283

Query: 261 -------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYI 313
                    FQLY  GVF   C   L+HGV  VGYG ++G+ YW+V+NSWG  WGEAGYI
Sbjct: 284 VAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYI 343

Query: 314 RMARNSPSSNIGICGILMQASYPVKR 339
           RM RN  +S  G CGI M ASYP K+
Sbjct: 344 RMERNVNAS-TGKCGIAMMASYPTKK 368


>gi|351721126|ref|NP_001237199.1| cysteine proteinase precursor [Glycine max]
 gi|31559530|dbj|BAC77523.1| cysteine proteinase [Glycine max]
 gi|31559532|dbj|BAC77524.1| cysteine proteinase [Glycine max]
          Length = 362

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/344 (45%), Positives = 198/344 (57%), Gaps = 42/344 (12%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQY--SREYGSEDEWQRRFGIY 86
           VLSL L  VLG+ A ++          +S+ + +E W   +  SR  G +    +RF ++
Sbjct: 10  VLSLSL--VLGV-ANSFDFHDKDLESEESLWDLYERWRSHHTVSRSLGDK---HKRFNVF 63

Query: 87  SSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG---------YNKPYNEPRWPSV 137
            +N+ ++   N  +  +KL  NKFAD++N EF STY G          + P     +   
Sbjct: 64  KANMMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHRMFRDMPRGNGTFMYE 123

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
           +   +PASVDWRK+GAVT VKDQG CGSCWAFS V AVEGIN++KT KLVSLSEQELVDC
Sbjct: 124 KVGSVPASVDWRKKGAVTDVKDQGHCGSCWAFSTVVAVEGINQIKTNKLVSLSEQELVDC 183

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
           D   EN GCNGG ME AF+FI + GG+TTE  YPY  ++  C   K    AV+I G+E +
Sbjct: 184 DT-EENAGCNGGLMESAFQFIKQKGGITTESYYPYTAQDGTCDASKANDLAVSIDGHENV 242

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGE 294
           P                          FQ YS GVF   C  +LNHGV +VGYG    G 
Sbjct: 243 PGNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTELNHGVAIVGYGATVDGT 302

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            YW+V+NSWG  WGE GYIRM RN  S   G+CGI M ASYP+K
Sbjct: 303 SYWIVRNSWGPEWGELGYIRMQRN-ISKKEGLCGIAMLASYPIK 345


>gi|20260334|gb|AAM13065.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|23197782|gb|AAN15418.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
          Length = 357

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/308 (47%), Positives = 190/308 (61%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + YGS  E +RR  I+  N+++I+  N++NLS++L    FADLS  E+   
Sbjct: 42  FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEV 101

Query: 122 YLGYNK--PYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G +   P N        R+ +     LP SVDWR EGAVT VKDQG C SCWAFS V 
Sbjct: 102 CHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVG 161

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI K GG+ T++DYPY+
Sbjct: 162 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKLETAYEFIMKNGGLGTDNDYPYK 219

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C    K  +  V I GYE +PA                         FQLY  GV
Sbjct: 220 AVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV 279

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YWLVKNS G +WGEAGY++MARN  +   G+CGI 
Sbjct: 280 FDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPR-GLCGIA 338

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 339 MRASYPLK 346


>gi|326507362|dbj|BAK03074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 196/316 (62%), Gaps = 39/316 (12%)

Query: 62  FENWLKQY----SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADL 113
           ++ WL ++    S    S  + +RRF  +  N++++D  N++  +    F+L  N+FADL
Sbjct: 52  YDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLAMNRFADL 111

Query: 114 SNEEFISTYLGYNKPYNEPRWPSV-----QYLG---LPASVDWRKEGAVTPVKDQGQCGS 165
           +N+EF + YLG        R   V     ++ G   LP +VDWR++GAV PVK+QGQCGS
Sbjct: 112 TNDEFRAAYLGVKGAAERNRAGRVVGERYRHDGAEELPEAVDWREKGAVAPVKNQGQCGS 171

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAV+ VE IN++ TG++V+LSEQELV+CD+N ++ GCNGG M+ AFEFI K GG+ 
Sbjct: 172 CWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAFEFIIKNGGID 231

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TEDDYPY+  + RC   +     V+I G+E +P                          F
Sbjct: 232 TEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREF 291

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           QLY  GVF   CG QL+HGV  VGYG ++G+ YW+V+NSWG +WGEAGY+RM RN   ++
Sbjct: 292 QLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTS 351

Query: 324 IGICGILMQASYPVKR 339
            G CGI M +SYP K+
Sbjct: 352 -GKCGIAMMSSYPTKK 366


>gi|204307508|gb|ACI00280.1| triticain beta 2 [Hordeum vulgare]
          Length = 473

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 196/316 (62%), Gaps = 39/316 (12%)

Query: 62  FENWLKQY----SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADL 113
           ++ WL ++    S    S  + +RRF  +  N++++D  N++  +    F+L  N+FADL
Sbjct: 52  YDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLAMNRFADL 111

Query: 114 SNEEFISTYLGYNKPYNEPRWPSV-----QYLG---LPASVDWRKEGAVTPVKDQGQCGS 165
           +N+EF + YLG        R   V     ++ G   LP +VDWR++GAV PVK+QGQCGS
Sbjct: 112 TNDEFRAAYLGVKGAAERNRAGRVVGERYRHDGAEELPEAVDWREKGAVAPVKNQGQCGS 171

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAV+ VE IN++ TG++V+LSEQELV+CD+N ++ GCNGG M+ AFEFI K GG+ 
Sbjct: 172 CWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAFEFIIKNGGID 231

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TEDDYPY+  + RC   +     V+I G+E +P                          F
Sbjct: 232 TEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREF 291

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           QLY  GVF   CG QL+HGV  VGYG ++G+ YW+V+NSWG +WGEAGY+RM RN   ++
Sbjct: 292 QLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTS 351

Query: 324 IGICGILMQASYPVKR 339
            G CGI M +SYP K+
Sbjct: 352 -GKCGIAMMSSYPTKK 366


>gi|356543122|ref|XP_003540012.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 342

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 190/318 (59%), Gaps = 34/318 (10%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNK 109
           +K    SM ER E W+++Y + Y    E ++RF I+ +NV++I+  N+  N  +KL+ N 
Sbjct: 27  RKLHDASMYERHEQWMEKYGKVYKDSAEXEKRFLIFENNVEFIESFNAAGNKPYKLSINH 86

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSVQ-------YLGLPASVDWRKEGAVTPVKDQGQ 162
            AD +NEEF++++ GY   + +    + Q          +P +VDWR++G  T +KDQGQ
Sbjct: 87  LADQTNEEFMASHKGYKGSHWQGLRITTQTPFKYENVTDIPWAVDWRQKGDATSIKDQGQ 146

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CG CWAFSAVAA EGI ++ TG LVSLSEQELVDCD  S + GC+GG ME  FEFI K G
Sbjct: 147 CGICWAFSAVAATEGIYQITTGNLVSLSEQELVDCD--SVDHGCDGGLMEHGFEFIIKNG 204

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+++E +YPY   N  C T+K       I GYE +P                        
Sbjct: 205 GISSEANYPYTAVNGTCDTNKEASPGAQIKGYETVPVNCEEELQKAVANQPVSVSIDAGG 264

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
            AFQ YS GVF   CG QL+HGVT VGYG  D G +YW+VKNSWGT WGE GYIRM R  
Sbjct: 265 SAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGIQYWIVKNSWGTQWGEEGYIRMLRGI 324

Query: 320 PSSNIGICGILMQASYPV 337
            +   G+CGI M ASYP 
Sbjct: 325 DAQE-GLCGIAMDASYPT 341


>gi|171702841|dbj|BAG16376.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 333

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 189/314 (60%), Gaps = 38/314 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFA 111
           D  +M++R   W+ ++ R Y   +E   R+ ++  NV+ I+ +N     L+FKL  N+FA
Sbjct: 24  DEVAMQKRHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFA 83

Query: 112 DLSNEEFISTYLGY---------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           DL+NEEF S Y G+          KP    R+ +V    LP SVDWRK+GAVTP+KDQG 
Sbjct: 84  DLTNEEFRSMYTGFKGNSVLSSRTKP-TSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGL 142

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFSAVAA+EG+ ++K GKL+SLSEQELVDCD N  + GC GG M+ AF +   IG
Sbjct: 143 CGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTN--DGGCMGGLMDTAFNYTITIG 200

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+T+E +YPY+  N  C  +KTK  A +I G+E +PA                       
Sbjct: 201 GLTSESNYPYKSTNGTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGD 260

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             FQ YS GVF   C   L+HGVT VGYG   +G KYW++KNSWG  WGE GY+R+ ++ 
Sbjct: 261 IGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGERGYMRIKKDI 320

Query: 320 PSSNIGICGILMQA 333
              + G CG+ M A
Sbjct: 321 KPKH-GQCGLAMNA 333


>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 188/319 (58%), Gaps = 35/319 (10%)

Query: 53  YDPQSME------ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLT 106
           Y P+ +        RFE+W+ ++ + Y S +E   RF ++  N+ +ID  N +  S+ L 
Sbjct: 389 YSPEDLTCIDKLIARFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVSSYWLG 448

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQG 161
            N+FADLS+EEF S YLG    +   R  S ++       LP SVDWRK+GAVT VK+QG
Sbjct: 449 LNEFADLSHEEFKSKYLGLRAEFPRSRDYSGEFRYRDVADLPESVDWRKKGAVTHVKNQG 508

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCWAFS VAAVEGIN++ TG L +LSEQEL+DCD  + N GCNGG M+ AF FI   
Sbjct: 509 ACGSCWAFSTVAAVEGINQIVTGNLTTLSEQELIDCD-TTFNSGCNGGLMDYAFAFIASN 567

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------- 260
           GG+  EDDYPY  +   C+  K     VTI+GYE +P +                     
Sbjct: 568 GGLHKEDDYPYLMEEGTCEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEAS 627

Query: 261 -YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
              FQ YS GVF+  CG +L+HGV  VGYG   G  Y +VKNSWG  WGE GYIRM RN+
Sbjct: 628 GRDFQFYSGGVFNGPCGTELDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNT 687

Query: 320 PSSNIGICGILMQASYPVK 338
             +  G+CGI   ASYP K
Sbjct: 688 GKTE-GLCGINKMASYPTK 705


>gi|297809385|ref|XP_002872576.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318413|gb|EFH48835.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 371

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/308 (47%), Positives = 191/308 (62%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + Y S  E +RR  I+  N+++I   N++NLS++L  N+FADLS  E+   
Sbjct: 56  FESWMVKHGKVYESVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYAQI 115

Query: 122 YLGYNK--PYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G +   P N        R+ +     LP SVDWR EGAVT VKDQGQC SCWAFS V 
Sbjct: 116 CHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGQCRSCWAFSTVG 175

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI   GG+ T++DYPY+
Sbjct: 176 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKVETAYEFIMNNGGLGTDNDYPYK 233

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C    K  +  V I GYE +PA                         FQLY+ GV
Sbjct: 234 ALNGVCNDRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVVDSSSREFQLYASGV 293

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YW+V+NS G +WGEAGY++MARN  +   G+CGI 
Sbjct: 294 FDGTCGTNLNHGVVVVGYGTENGRDYWIVRNSRGNTWGEAGYMKMARNIANPR-GLCGIA 352

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 353 MRASYPLK 360


>gi|18402225|ref|NP_566633.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|11994461|dbj|BAB02463.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17065298|gb|AAL32803.1| cysteine proteinase [Arabidopsis thaliana]
 gi|20260004|gb|AAM13349.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642713|gb|AEE76234.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 452

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/348 (42%), Positives = 205/348 (58%), Gaps = 32/348 (9%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER-FENWLKQYSREYGSEDEW 79
           M   +++  L+L +  VL I     S    +    ++   R +E WL +  + Y    E 
Sbjct: 1   MATSIKSITLALLIFSVLLISLSLGSVTATETTRNEAEARRMYERWLVENRKNYNGLGEK 60

Query: 80  QRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
           +RRF I+  N+++++  +S  N ++++   +FADL+N+EF + YL              +
Sbjct: 61  ERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFRAIYLRSKMERTRVPVKGEK 120

Query: 139 YL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           YL      LP ++DWR +GAV PVKDQG CGSCWAFSA+ AVEGIN++KTG+L+SLSEQE
Sbjct: 121 YLYKVGDSLPDAIDWRAKGAVNPVKDQGSCGSCWAFSAIGAVEGINQIKTGELISLSEQE 180

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTKHHAVTIT 252
           LVDCD  S N GC GG M+ AF+FI + GG+ TE+DYPY   + + C +DK     VTI 
Sbjct: 181 LVDCDT-SYNDGCGGGLMDYAFKFIIENGGIDTEEDYPYIATDVNVCNSDKKNTRVVTID 239

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +P                         AFQLY+ GVF   CG  L+HGV  VGYG 
Sbjct: 240 GYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYTSGVFTGTCGTSLDHGVVAVGYGS 299

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           + G+ YW+V+NSWG++WGE+GY ++ RN   S+ G CG+ M ASYP K
Sbjct: 300 EGGQDYWIVRNSWGSNWGESGYFKLERNIKESS-GKCGVAMMASYPTK 346


>gi|357452075|ref|XP_003596314.1| Cysteine proteinase [Medicago truncatula]
 gi|355485362|gb|AES66565.1| Cysteine proteinase [Medicago truncatula]
          Length = 341

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 193/311 (62%), Gaps = 30/311 (9%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFAD 112
           DP  M E  E W+ Q+ + Y +  E Q+RFGI+  NV YI+  N+  N S+KL  N FAD
Sbjct: 33  DP--MYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLNHFAD 90

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLGL---PASVDWRKEGAVTPVKDQGQCGSCWAF 169
           L+N EFI+    +N   +     + +Y  +   P++VDWR+EGAVTPVK+QGQCG CWAF
Sbjct: 91  LTNHEFIAARNKFNGYLHGSIITTFKYKNVSDVPSAVDWRQEGAVTPVKNQGQCGCCWAF 150

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SAVA+ EGI+KL TG LVSLSEQELVDCD N E+QGC GG M+ AFEFI +  G++TE +
Sbjct: 151 SAVASTEGIHKLTTGNLVSLSEQELVDCDTNGEDQGCEGGLMDDAFEFIIQNNGLSTEAE 210

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYS 267
           YPY+G +  C   +    A TI+GYE +P                          FQ Y 
Sbjct: 211 YPYQGVDGTCNKTEVGSSAATISGYENVPVNDEQALQKAVANQPVSVAIDASGSDFQFYK 270

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDHGE-KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            GVF   CG +L+HGV VVGYG    E +YWLVKNSWGT WGE GYIRM R   +S  G+
Sbjct: 271 SGVFTGSCGTELDHGVAVVGYGVGEDETEYWLVKNSWGTQWGEEGYIRMQRGVDASE-GL 329

Query: 327 CGILMQASYPV 337
           CGI MQ SYP 
Sbjct: 330 CGIAMQPSYPT 340


>gi|413917937|gb|AFW57869.1| hypothetical protein ZEAMMB73_830006 [Zea mays]
          Length = 443

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 184/300 (61%), Gaps = 38/300 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           Q+M  R E W+ +Y R Y    E  RRF ++ +N+  I+ +N+ N  F L  N+FADL++
Sbjct: 35  QAMVARHEEWMAKYDRVYSDAAEKARRFEVFKANMALIESVNAGNHKFWLEANRFADLTD 94

Query: 116 EEFISTYLGYNKPYNEP--------------RWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           +EF +T+ GY +P                  ++ +V    +PASVDWR +GAVTP+K+QG
Sbjct: 95  DEFRATWTGY-RPKTAAASSKGRSRTATTGFKYANVSLDDVPASVDWRTKGAVTPIKNQG 153

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           +CG CWAFSAVA++EG+ KL TGKLVSLSEQELVDCDVN  +QGC GG M+ AF+FI   
Sbjct: 154 ECGCCWAFSAVASMEGVVKLSTGKLVSLSEQELVDCDVNGMDQGCEGGEMDDAFDFIVGN 213

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA------RYA------------- 262
           GG+TTE  YPY   +  C +++    A +I GYE +PA      R A             
Sbjct: 214 GGLTTESRYPYTASDGTCNSNEASGDAASIKGYEDVPANDEASLRKAVANQPVSVAVDGG 273

Query: 263 ---FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              F+ Y  GV    CG +L+HG+  VGYG    G KYW++KNSWGTSWGEAGYIRM R+
Sbjct: 274 DSHFRFYKGGVLSGACGTELDHGIAAVGYGVASDGTKYWVMKNSWGTSWGEAGYIRMERD 333


>gi|146215978|gb|ABQ10191.1| actinidin Act1c [Actinidia eriantha]
          Length = 368

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/312 (46%), Positives = 188/312 (60%), Gaps = 37/312 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           ++  +E+WL ++ + Y S  E +RRF I+   +++ID  N+  + S+K+  N+FADL+NE
Sbjct: 34  VKAMYESWLIKHGKSYNSLGERERRFEIFKETLRFIDEHNADTSRSYKVGLNQFADLTNE 93

Query: 117 EFISTYLGYNKPYN--------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           EF STYLG+ +  N        EPR   V    LP  VDWR EGAV  +K+QGQCGSCWA
Sbjct: 94  EFRSTYLGFTRGSNKTKVSNRYEPRVGQV----LPDYVDWRSEGAVVDIKNQGQCGSCWA 149

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA+AAVEGINK+ TG L+SLSEQELVDC      +GC+GGYM   FEFI   GG+ TE+
Sbjct: 150 FSAIAAVEGINKIVTGNLISLSEQELVDCGRTQSTKGCDGGYMTDGFEFIINNGGINTEE 209

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
           +YPY  +  +C  +      VTI  YE +P                      A  AFQ Y
Sbjct: 210 NYPYTAQEGQCDLNLQNEKYVTIDNYENVPYYNEWALQTAVAYQPVSVALESAGDAFQHY 269

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           S G+F   CG   +H VT+VGYG + G  YW+VKNSW T+WGE GY+R+ RN   +  G 
Sbjct: 270 SSGIFTGPCGTATDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGA--GT 327

Query: 327 CGILMQASYPVK 338
           CGI    SYPVK
Sbjct: 328 CGIATMPSYPVK 339


>gi|193806686|sp|A5HII1.1|ACTN_ACTDE RecName: Full=Actinidain; Short=Actinidin; AltName: Full=Allergen
           Act d 1; AltName: Allergen=Act d 1; Flags: Precursor
 gi|146215974|gb|ABQ10189.1| actinidin Act1a [Actinidia deliciosa]
          Length = 380

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 196/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D      VTI  YE +P  
Sbjct: 186 QNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|242072394|ref|XP_002446133.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
 gi|241937316|gb|EES10461.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
          Length = 338

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/337 (43%), Positives = 200/337 (59%), Gaps = 36/337 (10%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FLL +LG  +   S    ++    +M ER ENW+ +Y R Y    E  RRF  +  NV +
Sbjct: 7   FLLAILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAF 66

Query: 93  IDYINSQNLS-FKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-------GLPA 144
           ++  N+   + F L  N+FADL+ EEF +   G+ KP +    P+  +         LP 
Sbjct: 67  VESFNTNKKNKFWLGVNQFADLTTEEFKANK-GF-KPISAEMVPTTGFKYENLSVSALPT 124

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           +VDWR +GAVTP+K+QGQCG CWAFSAVAA+EGI KL TG L+SLSEQELVDCD +S ++
Sbjct: 125 AVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDE 184

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GC GG+M+ AFEF+ K GG+ TE  YPY+  + +C+       A TI G+E +P      
Sbjct: 185 GCEGGWMDSAFEFVIKNGGLATESSYPYKAVDGKCKGG--SKSAATIKGHEDVPVNDEAA 242

Query: 259 ----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKN 301
                           +   F LYS GV    CG +L+HG+  +GYG E  G KYW++KN
Sbjct: 243 LMKAVANQPVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKN 302

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           SWGT+WGE G++RM ++  S   G+CG+ M+ SYP +
Sbjct: 303 SWGTTWGEKGFLRMEKD-ISDKQGMCGLAMKPSYPTE 338


>gi|168006315|ref|XP_001755855.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693174|gb|EDQ79528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 454

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 189/309 (61%), Gaps = 29/309 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           + E+F  W  ++ + Y S +E   R+ ++  N++YI   + +N S+ L   KFAD++N+E
Sbjct: 42  LSEQFGAWAHKHGKVYSSLEEHAHRYMVWKDNLEYIQRHSEKNRSYWLGLTKFADITNDE 101

Query: 118 FISTYLG--YNKPYNEPRWPSVQYLG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           F   Y G   ++     R    +Y     P SVDWRK+GAVT VKDQG CGSCWAFSA+ 
Sbjct: 102 FRRQYTGTRIDRSKRSKRKTGFRYADSEAPESVDWRKKGAVTTVKDQGSCGSCWAFSAIG 161

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           +VEGIN ++TG+ VSLSEQELVDCD+   NQGCNGG M+ AF+FI + GG+ TE+DYPY+
Sbjct: 162 SVEGINAIRTGEAVSLSEQELVDCDLEY-NQGCNGGLMDYAFDFILENGGIDTENDYPYK 220

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
           G + RC  +K   H VTI GYE +P                          FQLYS GVF
Sbjct: 221 GLDGRCDNNKKNAHVVTIDGYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQLYSGGVF 280

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN--IGICGI 329
              CG  L+HGV  VGYG +    YW+VKNSWG  WGE+GY+RM RN   SN   G+CGI
Sbjct: 281 TGECGTDLDHGVLAVGYGSEGSLDYWIVKNSWGEYWGESGYLRMQRNIKDSNHQFGLCGI 340

Query: 330 LMQASYPVK 338
            ++ SY VK
Sbjct: 341 NIEPSYAVK 349


>gi|194352756|emb|CAQ00106.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 196/316 (62%), Gaps = 39/316 (12%)

Query: 62  FENWLKQY----SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADL 113
           ++ WL ++    S    S  + +RRF  +  N++++D  N++  +    F+L  N+FADL
Sbjct: 52  YDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLAMNRFADL 111

Query: 114 SNEEFISTYLGYNKPYNEPRWPSV-----QYLG---LPASVDWRKEGAVTPVKDQGQCGS 165
           +N+EF + YLG        R   V     ++ G   LP +VDWR++GAV PVK+QGQCGS
Sbjct: 112 TNDEFRAAYLGVKGAAERNRAGRVVGDRYRHDGAEELPEAVDWREKGAVAPVKNQGQCGS 171

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAV+ VE IN++ TG++V+LSEQELV+CD+N ++ GCNGG M+ AFEFI K GG+ 
Sbjct: 172 CWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAFEFIIKNGGID 231

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TEDDYPY+  + RC   +     V+I G+E +P                          F
Sbjct: 232 TEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREF 291

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           QLY  GVF   CG QL+HGV  VGYG ++G+ YW+V+NSWG +WGEAGY+RM RN   ++
Sbjct: 292 QLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTS 351

Query: 324 IGICGILMQASYPVKR 339
            G CGI M +SYP K+
Sbjct: 352 -GKCGIAMMSSYPTKK 366


>gi|558563|emb|CAA57538.1| cysteine proteinase [Cicer arietinum]
          Length = 325

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/307 (46%), Positives = 184/307 (59%), Gaps = 32/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y    E   RF I+  N+++ID  N+QN S+K+  NKFAD++NEE+   
Sbjct: 4   YEKWLVKHQKMYNGLGEKDTRFQIFKDNLRFIDEHNAQNYSYKVGLNKFADINNEEYRDM 63

Query: 122 YLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           YLG  K   + R    +  G         +   VDWR +GAVT +KDQG CGSCWAFS +
Sbjct: 64  YLG-TKSDAKRRVMKTKITGHRITYNSVIVTVKVDWRLKGAVTHIKDQGSCGSCWAFSTI 122

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           A VE INK+ TGK VSLSEQELVDCD  + N+GCNGG M+ AFEFI + GG+ T+ DYPY
Sbjct: 123 ATVEAINKIVTGKFVSLSEQELVDCD-RAFNEGCNGGLMDYAFEFIIRNGGIDTDQDYPY 181

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPARY---------------------AFQLYSHGVF 271
            G   +C   K     V+I GYE +P+                       A QLY  GVF
Sbjct: 182 NGFERKCDPTKKNAKVVSIDGYEDVPSYMNALKKAVAHQPVSVAIAGLGRALQLYQSGVF 241

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV VVGYG ++G  YWLV+NSWGT+WGE GY ++A  +  S    CGI M
Sbjct: 242 TGKCGTDLDHGVVVVGYGSENGVDYWLVRNSWGTNWGEDGYFKIASRNVKSLYRKCGIAM 301

Query: 332 QASYPVK 338
           +ASYPVK
Sbjct: 302 EASYPVK 308


>gi|255540425|ref|XP_002511277.1| cysteine protease, putative [Ricinus communis]
 gi|46395620|sp|O65039.1|CYSEP_RICCO RecName: Full=Vignain; AltName: Full=Cysteine endopeptidase; Flags:
           Precursor
 gi|2944446|gb|AAC62396.1| cysteine endopeptidase precursor [Ricinus communis]
 gi|223550392|gb|EEF51879.1| cysteine protease, putative [Ricinus communis]
          Length = 360

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/310 (47%), Positives = 186/310 (60%), Gaps = 35/310 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E W   ++    S  E Q+RF ++  N  ++   N  +  +KL  NKFAD++N EF +T
Sbjct: 38  YERWRSHHTVSR-SLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNT 96

Query: 122 YLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           Y G    ++      PR        +   +PASVDWRK+GAVT VKDQGQCGSCWAFS +
Sbjct: 97  YSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTI 156

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVEGIN++KT KLVSLSEQELVDCD + +NQGCNGG M+ AFEFI + GG+TTE +YPY
Sbjct: 157 VAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANYPY 215

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
              +  C   K    AV+I G+E +P                          FQ YS GV
Sbjct: 216 EAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGV 275

Query: 271 FDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F   CG +L+HGV +VGYG    G KYW VKNSWG  WGE GYIRM R   S   G+CGI
Sbjct: 276 FTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMER-GISDKEGLCGI 334

Query: 330 LMQASYPVKR 339
            M+ASYP+K+
Sbjct: 335 AMEASYPIKK 344


>gi|242072392|ref|XP_002446132.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
 gi|241937315|gb|EES10460.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
          Length = 337

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 202/336 (60%), Gaps = 35/336 (10%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FLL +LG  +   S    ++    +M ER ENW+ +Y R Y    E  RRF  +  NV +
Sbjct: 7   FLLAILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAF 66

Query: 93  IDYINSQNLS-FKLTDNKFADLSNEEFISTYLGYNKPYNEP------RWPSVQYLGLPAS 145
           ++  N+   + F L  N+FADL+ EEF +   G+ KP  E       ++ ++    LP +
Sbjct: 67  VESFNTNKKNKFWLGVNQFADLTTEEFKANK-GF-KPTAEKVPTTGFKYENLSVSALPTA 124

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR +GAVTP+K+QGQCG CWAFSAVAA+EGI KL TG L+SLSEQELVDCD +S ++G
Sbjct: 125 VDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEG 184

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           C GG+M+ AFEF+ K GG+ TE +YPY+  + +C+       A TI G+E +P       
Sbjct: 185 CEGGWMDSAFEFVIKNGGLATESNYPYKAVDGKCKGG--SKSAATIKGHEDVPVNNEAAL 242

Query: 259 ---------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNS 302
                          +   F LYS GV    CG +L+HG+  +GYG E  G KYW++KNS
Sbjct: 243 MKAVANQPVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGMESDGTKYWILKNS 302

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           WGT+WGE G++RM ++  +   G+CG+ M+ SYP +
Sbjct: 303 WGTTWGEKGFLRMEKD-ITDKRGMCGLAMKPSYPTE 337


>gi|84181681|gb|AAW78661.2| senescence-specific cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/340 (42%), Positives = 205/340 (60%), Gaps = 35/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L+LF +  LG+ +   +   P  Y+  +M  R + W+  + + Y   +E + RF I+  N
Sbjct: 12  LALFFI-CLGLWSSQVALSRPINYEA-TMRARHDQWIVHHEKVYKDLNEKEVRFQIFKEN 69

Query: 90  VQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPS--------VQYL 140
           V+ I+  N+ ++  +KL  NKF+DL+NEEF   + GY + + +    S            
Sbjct: 70  VERIEAFNAGEDKGYKLGFNKFSDLTNEEFRVLHTGYKRSHPKVMTSSKGKTHFRYTNVT 129

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            +P ++DWRK+GAVTP+KDQ +CG CWAFSAVAA+EG+++LKTG+L+ LSEQELVDCDV 
Sbjct: 130 DIPPTMDWRKKGAVTPIKDQKECGCCWAFSAVAAMEGLHQLKTGELIPLSEQELVDCDVE 189

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR 260
            E++GC+GG ++ AF+FI K  G+TTE +YPY+G++  C   K+   A  ITGYE +PA 
Sbjct: 190 GEDEGCSGGLLDTAFDFILKNKGLTTEVNYPYKGEDGVCNKKKSALSAAKITGYEDVPAN 249

Query: 261 ----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYW 297
                                 + FQ YS GVF   C   LNH VT VGYG    G KYW
Sbjct: 250 SEKALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTKYW 309

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           ++KNSWG+ WG++GY+R+ R+      G+CG+ M ASYP 
Sbjct: 310 IIKNSWGSKWGDSGYMRIKRDVHEKE-GLCGLAMDASYPT 348


>gi|310656790|gb|ADP02219.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 419

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 182/301 (60%), Gaps = 29/301 (9%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNE 116
           +M E+ E W+ +++R Y    E  +RF  + +NV +I+  N+ N  F L  N+F DL+N+
Sbjct: 32  AMVEKHEQWMAKFNRVYKDSTEKAQRFKAFKANVAFIESFNTGNHKFWLGVNQFTDLTND 91

Query: 117 EFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EF +T        N  R P+      V    LPA+VDWR +G VTP+KDQGQCG CWAFS
Sbjct: 92  EFRATKTNKGLKRNGARAPTRFKYNNVSTDALPAAVDWRTKGVVTPIKDQGQCGCCWAFS 151

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAA EGI KL TGKLVSLSEQELVDCDV+  +QGC GG M+ AF+FI K GG+TTE +Y
Sbjct: 152 AVAATEGIVKLSTGKLVSLSEQELVDCDVHGVDQGCEGGEMDNAFKFIIKNGGLTTEANY 211

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY  ++ +C+T  T +   TI GYE +PA                         FQ YS 
Sbjct: 212 PYTAQDGQCKTSTTSNSVATIKGYEDVPANDESSLMKAVANQPVSVAVDGGDVIFQHYSG 271

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GV    CG  L+HG+  +GYG    G K+WL+KNSWGT+WGE+GY+RM ++    +  I 
Sbjct: 272 GVMTGSCGTDLDHGIVAIGYGMTSDGTKFWLLKNSWGTTWGESGYLRMEKDISDKSGTII 331

Query: 328 G 328
           G
Sbjct: 332 G 332


>gi|242049716|ref|XP_002462602.1| hypothetical protein SORBIDRAFT_02g028840 [Sorghum bicolor]
 gi|241925979|gb|EER99123.1| hypothetical protein SORBIDRAFT_02g028840 [Sorghum bicolor]
          Length = 384

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/363 (44%), Positives = 198/363 (54%), Gaps = 84/363 (23%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFAD 112
           DP  M ERFE W+ ++ R Y    E QRR  +Y  NV  ++  NS  N  ++L DNKFAD
Sbjct: 26  DP--MLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVALVETFNSMSNGGYRLADNKFAD 83

Query: 113 LSNEEFISTYLGYNKPYNEPRWP-------SVQYLG----------LPASVDWRKEGAVT 155
           L+NEEF +  LG+ +P    R         +V  +G          LP SVDWR++GAV 
Sbjct: 84  LTNEEFRAKMLGFGRPPPHGRATGHTTTPGTVACIGSGLGRRYSDELPKSVDWREKGAVA 143

Query: 156 PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAF 215
           PVK+QG+CGSCWAFSAVAA+EGIN++K GKLVSLSEQELVDCD  +   GC GGYM  AF
Sbjct: 144 PVKNQGECGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKA--IGCAGGYMSWAF 201

Query: 216 EFITKIGGVTTEDDYPYRGK----------------------------NDRCQTDKTKHH 247
           EF+    G+TTE +YPY+G                             N  CQT K K  
Sbjct: 202 EFVMNNSGLTTERNYPYQGTYAHGNRKTHALPFDCTKGSSTCDSRAGMNGACQTPKLKES 261

Query: 248 AVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTV 285
           AV+I+GY  + A                       + +QLY  GVF   C   LNHGVTV
Sbjct: 262 AVSISGYVNVTASSEPDLLRAAAAQPVSVAVDAGSFVWQLYGGGVFTGPCTADLNHGVTV 321

Query: 286 VGYGEDH-----------GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
           VGYGE             G+KYW+VKNSWG  WG+AGYI M R + S   G+CGI +  S
Sbjct: 322 VGYGETQRDTDGDGTGVPGQKYWIVKNSWGPEWGDAGYILMQREA-SVASGLCGIALLPS 380

Query: 335 YPV 337
           YPV
Sbjct: 381 YPV 383


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/315 (47%), Positives = 189/315 (60%), Gaps = 28/315 (8%)

Query: 51  QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           Q +   ++ + F  WL+ +SR Y S  E   RF I+  N  YI   N Q  S+ L  NKF
Sbjct: 38  QLHSDDAILDVFHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQKSYWLGLNKF 97

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPS-VQYLGLPA--SVDWRKEGAVTPVKDQGQCGSCW 167
           +DL+++EF + YLG  KP N  R  +   Y  + A   VDWR +GAVT VKDQG CGSCW
Sbjct: 98  SDLTHQEFRAQYLG-TKPVNRQRKEANFMYEDVEAEPKVDWRLKGAVTDVKDQGACGSCW 156

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAV +VEG+N +KTG+LVSLSEQELVDCD   +NQGCNGG M+ AFEFI K GG+ TE
Sbjct: 157 AFSAVGSVEGVNAIKTGELVSLSEQELVDCD-RKQNQGCNGGLMDYAFEFIIKNGGIDTE 215

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQL 265
            DYPY+ ++ RC   +     V I  Y+ +P +                        FQ 
Sbjct: 216 KDYPYKARDGRCDEGRRNSKVVVIDDYQDVPTQSESALMKALTKNPVSVAIEAGGRDFQH 275

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GVF   CG +L+HGV  VGYG +D G  YW+VKNSWG  WGE GYIRM R    S  
Sbjct: 276 YQGGVFTGPCGSELDHGVLAVGYGTDDDGVNYWIVKNSWGPGWGEKGYIRMERFGSDSTD 335

Query: 325 GICGILMQASYPVKR 339
           G CGI ++AS+P+K+
Sbjct: 336 GKCGINIEASFPIKK 350


>gi|297603535|ref|NP_001054211.2| Os04g0670200 [Oryza sativa Japonica Group]
 gi|109939735|sp|P25777.2|ORYB_ORYSJ RecName: Full=Oryzain beta chain; Flags: Precursor
 gi|32488398|emb|CAE02823.1| OSJNBa0043A12.28 [Oryza sativa Japonica Group]
 gi|90399163|emb|CAJ86092.1| H0818H01.14 [Oryza sativa Indica Group]
 gi|125550169|gb|EAY95991.1| hypothetical protein OsI_17862 [Oryza sativa Indica Group]
 gi|215766596|dbj|BAG98700.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255675868|dbj|BAF16125.2| Os04g0670200 [Oryza sativa Japonica Group]
          Length = 466

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 138/291 (47%), Positives = 183/291 (62%), Gaps = 32/291 (10%)

Query: 78  EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW 134
           E +RRF ++  N++++D  N+   +   F+L  N+FADL+NEEF +T+LG  K     R 
Sbjct: 70  EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGA-KVAERSRA 128

Query: 135 PSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
              +Y       LP SVDWR++GAV PVK+QGQCGSCWAFSAV+ VE IN+L TG++++L
Sbjct: 129 AGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITL 188

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELV+C  N +N GCNGG M+ AF+FI K GG+ TEDDYPY+  + +C  ++     V
Sbjct: 189 SEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVV 248

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           +I G+E +P                          FQLY  GVF   CG  L+HGV  VG
Sbjct: 249 SIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVG 308

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG D+G+ YW+V+NSWG  WGE+GY+RM RN  +   G CGI M ASYP K
Sbjct: 309 YGTDNGKDYWIVRNSWGPKWGESGYVRMERNI-NVTTGKCGIAMMASYPTK 358


>gi|172052260|gb|ACB70409.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 185/311 (59%), Gaps = 35/311 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E +E W   ++    S DE  +RF ++ +NV Y+   N ++  +KL  NKFAD++N EF 
Sbjct: 36  ELYERWRSHHTVSR-SLDEKDKRFNVFKANVHYVHNFNKKDKPYKLKLNKFADMTNHEFR 94

Query: 120 STYLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
             Y G    ++     + +  G         +P +VDWRK+GAVTPVKDQG+CGSCWAFS
Sbjct: 95  HHYAGSKIKHHRTFLGASRANGTFMYAHEDSVPPTVDWRKKGAVTPVKDQGKCGSCWAFS 154

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
            V AVEGIN++KT +LVSLSEQELVDCD  S+NQGCNGG M+ AFEFI K GG+ TE++Y
Sbjct: 155 TVVAVEGINQIKTNELVSLSEQELVDCDT-SQNQGCNGGLMDMAFEFIKKKGGINTEENY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY  +   C   K     V+I G+E +P                          FQ YS 
Sbjct: 214 PYMAEGGECDIQKRNSPVVSIDGHEDVPPNDEGSLLKAVANQPVSVAIQASGSDFQFYSE 273

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGE-KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG +L+HGV +VGYG      KYW+VKNSWG  WGE GYIRM R   +   G+C
Sbjct: 274 GVFTGDCGTELDHGVAIVGYGTTLDRTKYWIVKNSWGPEWGEKGYIRMQREIDAEE-GLC 332

Query: 328 GILMQASYPVK 338
           GI MQ SYP+K
Sbjct: 333 GIAMQPSYPIK 343


>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/307 (48%), Positives = 185/307 (60%), Gaps = 32/307 (10%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E FE+W+ ++S+ Y S +E   RF I+  N+++ID  N +  S+ L  N+FADLS+EEF 
Sbjct: 45  ELFESWMSKHSKTYRSIEEKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFK 104

Query: 120 STYLGYNKPYNEPRWPSVQYLG------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           S YLG    +  PR  S +         LP SVDWR +GAVTPVK+QG CGSCWAFS VA
Sbjct: 105 SKYLGLRVEF--PRKRSSRGFSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVA 162

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TG L SLSEQEL+DCD  S N GC GG M+ AF++I    G+  E+DYPY 
Sbjct: 163 AVEGINQIVTGNLTSLSEQELIDCD-RSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYL 221

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
            +  RC  +K +   VTI+GYE +PA                         FQ Y  G+F
Sbjct: 222 MEEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIF 281

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG Q++HGVT VGYG   G  Y +VKNSWG  WGE GYIRM RN+     G+CGI  
Sbjct: 282 TGRCGTQMDHGVTAVGYGSSEGTDYIIVKNSWGPKWGENGYIRMKRNTGKPE-GLCGINQ 340

Query: 332 QASYPVK 338
            ASYP K
Sbjct: 341 MASYPTK 347


>gi|116781957|gb|ABK22314.1| unknown [Picea sitchensis]
          Length = 369

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 198/339 (58%), Gaps = 39/339 (11%)

Query: 36  WVLGIPAGAWSEGYPQK--YDPQSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQ 91
           WVL   A  ++ G+  +     +S+   ++NW  Q+  SR   SE E   RF I+  NV+
Sbjct: 18  WVLSASASDFTPGFTDEDLESEKSLRSLYDNWALQHRSSRSLDSE-EHAERFEIFKENVK 76

Query: 92  YIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWPSVQYLG---LPAS 145
           YID +N ++  +KL  NKFADLSNEEF + Y+G     +   E +  S  Y     LPAS
Sbjct: 77  YIDSVNKKDSPYKLGLNKFADLSNEEFKAIYMGTKMDLRGDREVQSGSFMYQNSEPLPAS 136

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           +DWR++GAV  VK+QG CGSCWAFS VA+VEGIN + TG LVSLSEQ+LVDC  ++EN G
Sbjct: 137 IDWRQKGAVAAVKNQGHCGSCWAFSTVASVEGINYITTGNLVSLSEQQLVDC--STENSG 194

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA--VTITGYEAIPAR--- 260
           CNGG M+ AF++I   GG+ TED+YPY  +   C + K       V I G+E +PA    
Sbjct: 195 CNGGLMDTAFQYIINNGGIVTEDNYPYTAEATECSSTKINSQTTRVVIDGFEDVPANNEQ 254

Query: 261 -------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVK 300
                                FQ YS GVF   CG  L+HGV  VGYG    G  YW+V+
Sbjct: 255 ALKEAVAHQPVSVAIEASGQDFQFYSTGVFTGKCGTALDHGVVAVGYGTSPEGINYWIVR 314

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           NSWG  WGE GYIRM +   ++  G CGI MQASYP K+
Sbjct: 315 NSWGPKWGEEGYIRMQQGIEAAE-GKCGIAMQASYPTKK 352


>gi|160858205|dbj|BAF93840.1| triticain beta 2 [Triticum aestivum]
          Length = 469

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/294 (46%), Positives = 185/294 (62%), Gaps = 33/294 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEFISTYLGYNKPYNEP- 132
           E +RRF  +  N++++D  N++  +    F+L  N+FADL+N+EF + YLG       P 
Sbjct: 70  ERERRFRAFWDNLRFVDAHNARAAAGEEGFRLAMNRFADLTNDEFRAAYLGVKGQRARPG 129

Query: 133 -----RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
                R+       LP +VDWR++GAV PVK+QGQCGSCWAFSA++ VE IN++ TG++V
Sbjct: 130 RVVGERYRHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAISTVESINQIVTGEMV 189

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           +LSEQELV+CD N ++ GCNGG M+ AFEFI K GG+ TEDDYPY+  + RC   +    
Sbjct: 190 TLSEQELVECDTNGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAIDGRCDVLRKNAK 249

Query: 248 AVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTV 285
            V+I G+E +P                          FQLY  GVF   CG QL+HGV  
Sbjct: 250 VVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVA 309

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG ++G+ YW+V+NSWG +WGEAGY+RM RN   ++ G CGI M +SYP K+
Sbjct: 310 VGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTS-GKCGIAMMSSYPTKK 362


>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
 gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/307 (48%), Positives = 185/307 (60%), Gaps = 32/307 (10%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E FE+W+ ++S+ Y S +E   RF I+  N+++ID  N +  S+ L  N+FADLS+EEF 
Sbjct: 45  ELFESWMSKHSKAYRSIEEKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFK 104

Query: 120 STYLGYNKPYNEPRWPSVQYLG------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           S YLG    +  PR  S +         LP SVDWR +GAVTPVK+QG CGSCWAFS VA
Sbjct: 105 SKYLGLRVEF--PRKRSSRGFSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVA 162

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN++ TG L SLSEQEL+DCD  S N GC GG M+ AF++I    G+  E+DYPY 
Sbjct: 163 AVEGINQIVTGNLTSLSEQELIDCD-RSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYL 221

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
            +  RC  +K +   VTI+GYE +PA                         FQ Y  G+F
Sbjct: 222 MEEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIF 281

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG Q++HGVT VGYG   G  Y +VKNSWG  WGE GYIRM RN+     G+CGI  
Sbjct: 282 TGRCGTQMDHGVTAVGYGSSEGTDYIIVKNSWGPKWGENGYIRMKRNTGKPE-GLCGINQ 340

Query: 332 QASYPVK 338
            ASYP K
Sbjct: 341 MASYPTK 347


>gi|595986|gb|AAA79915.1| cysteine proteinase, partial [Dianthus caryophyllus]
          Length = 427

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/310 (47%), Positives = 187/310 (60%), Gaps = 35/310 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYID-----YINSQNLSFKLTDNKFADLSNE 116
            ++WL ++ + Y +  E ++RF I+  N+++ID             F+L  NKFADL+N+
Sbjct: 5   LQSWLVKHRKNYNALGEKEKRFAIFRDNLEFIDQHNNNNNGGGGGEFELGLNKFADLTND 64

Query: 117 EFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           EF   Y G  +P       S +Y       LP SVDWRK+GAV+ VKDQGQCGSCWAFSA
Sbjct: 65  EFRRIYFGVKRPEKAESVKSDRYAVKEGDELPESVDWRKKGAVSHVKDQGQCGSCWAFSA 124

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           + AVEGINK+ TG L++LSEQELVDCD  S N GC+GG M+ AF FI   GG+ T+ DYP
Sbjct: 125 IGAVEGINKIVTGDLITLSEQELVDCDT-SYNSGCDGGLMDYAFRFIINNGGIDTDKDYP 183

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPA---------------RYA-------FQLYSHG 269
           Y+  +  C +++     VTI G E +PA               R A       FQLY  G
Sbjct: 184 YKATDGSCDSNRKNAKVVTIDGLEDVPANNEKALQKAVAHQPVRLAIEAGGRDFQLYKSG 243

Query: 270 VFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG  L+HGV  VGYG  D G+ YW+V+NSWG  WGE GYIRM RN+ S + G CG
Sbjct: 244 VFTGSCGTSLDHGVVAVGYGTTDDGKDYWIVRNSWGDDWGEDGYIRMERNTESKS-GKCG 302

Query: 329 ILMQASYPVK 338
           I ++ SYPVK
Sbjct: 303 IAIEPSYPVK 312


>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 200/337 (59%), Gaps = 33/337 (9%)

Query: 33  FLLWVLGIPAGAWS-EGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           F L+     AG +S  GY  + D +SM+   E FE+W+ ++ + Y S +E   RF I+  
Sbjct: 15  FCLFASLAVAGDFSIVGYSSE-DLKSMDKLIELFESWMSRHGKIYQSIEEKLHRFDIFKD 73

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPA 144
           N+++ID  N    ++ L  N+FADLS++EF + YLG    Y+  R    ++      LP 
Sbjct: 74  NLKHIDERNKVVSNYWLGLNEFADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDFELPK 133

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           SVDWRK+GAVT VK+QG CGSCWAFS VAAVEGIN++ TG L SLSEQEL+DCD  + N 
Sbjct: 134 SVDWRKKGAVTQVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCD-RTYNN 192

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GCNGG M+ AF FI + GG+  E+DYPY  +   C+  K +   VTI+GY  +P      
Sbjct: 193 GCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQS 252

Query: 259 ----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNS 302
                           +   FQ YS GVFD +CG  L+HGV  VGYG   G  Y +VKNS
Sbjct: 253 LLKALVNQPLSVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTSKGVNYIIVKNS 312

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           WG+ WGE GYIRM RN      GICGI   ASYP K+
Sbjct: 313 WGSKWGEKGYIRMRRNIGKPE-GICGIYKMASYPTKK 348


>gi|357130141|ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 187/310 (60%), Gaps = 33/310 (10%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E FE WL ++ + Y S +E   RF ++  N+++ID +N +  S+ L  N+FADL++EEF 
Sbjct: 148 ELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVTSYWLGLNEFADLTHEEFK 207

Query: 120 STYLGYN--KPYNEPR----WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           +TYLG     P  E R    +  V    LP SVDWR +GAVT VK+QGQCGSCWAFS VA
Sbjct: 208 ATYLGLAPPAPARESRGSFKYEDVSADDLPKSVDWRTKGAVTEVKNQGQCGSCWAFSTVA 267

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN + TG L +LSEQEL+DC V+  N GCNGG M+ AF +I   GG+ TE+ YPY 
Sbjct: 268 AVEGINAIVTGNLTALSEQELIDCSVDG-NNGCNGGLMDYAFSYIASSGGLHTEEAYPYL 326

Query: 234 GKNDRC-QTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGV 270
            +   C    K++  AVTI+GYE +PA                         FQ YS GV
Sbjct: 327 MEEGSCGDGKKSESEAVTISGYEDVPAHNEQALIKALAHQPVSVAIEASGRHFQFYSGGV 386

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGE--KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           FD  CG QL+HGV  VGYG D G+   Y +V+NSWG  WGE GYIRM R +     G+CG
Sbjct: 387 FDGPCGTQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAKWGEKGYIRMKRGTGKGE-GLCG 445

Query: 329 ILMQASYPVK 338
           I   ASYP K
Sbjct: 446 INKMASYPTK 455


>gi|297802228|ref|XP_002868998.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297314834|gb|EFH45257.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/292 (48%), Positives = 179/292 (61%), Gaps = 35/292 (11%)

Query: 81  RRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYLGYN----------KP 128
           +RF I+  N+++ID  N  ++N ++KL   KF DL+NEE+ S YLG            K 
Sbjct: 72  KRFNIFKDNLRFIDLHNEKNKNATYKLGLTKFTDLTNEEYRSLYLGARTEPVRRIAKAKN 131

Query: 129 YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
            N+    +V    +P +VDWR +GAV P+KDQG CGSCWAFS  AAVEGINK+ TG+L+S
Sbjct: 132 VNQKYSAAVDGKEVPETVDWRLKGAVNPIKDQGTCGSCWAFSTAAAVEGINKIVTGELIS 191

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELVDCD NS NQGCNGG M+ AF+FI K GG+ TE DYPYRG   +C +       
Sbjct: 192 LSEQELVDCD-NSYNQGCNGGLMDYAFQFIMKNGGLKTEKDYPYRGFGGKCNSFLKNAKV 250

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I GYE +P +                        FQ Y  G+F   CG  L+H V  V
Sbjct: 251 VSIDGYEDVPTKDETALKRAISLQPVSVAIEAGGRIFQHYQTGIFTGNCGTNLDHAVVAV 310

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG ++G  YW+V+NSWG  WGE GYIRM RN  SS  G CGI ++ASYPVK
Sbjct: 311 GYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLASSKSGKCGIAVEASYPVK 362


>gi|50355617|dbj|BAD29957.1| cysteine protease [Daucus carota]
          Length = 437

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/308 (45%), Positives = 192/308 (62%), Gaps = 33/308 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           + +WL ++ + Y +  E + RF I+  N++YID  N+  + S++L  N+FADL+NEE+ +
Sbjct: 49  YNSWLVKHGKSYNALGEKETRFQIFKDNLRYIDNHNADPDRSYELGLNRFADLTNEEYRA 108

Query: 121 TYLGYNKPYNEP--------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
            YLG     + P        R+  V+   LP S+DWR++GAV  VKDQG CGSCWAFSA+
Sbjct: 109 KYLGTKSRESRPKLSKGPSDRYAPVEGEELPDSIDWREKGAVAAVKDQGSCGSCWAFSAI 168

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVEGIN++ TG+L++LSEQELVDCD  S N+GC GG M+ AF FI K GG+ ++ DYPY
Sbjct: 169 GAVEGINQITTGELITLSEQELVDCD-RSYNEGCEGGLMDYAFNFIIKNGGIDSDLDYPY 227

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGV 270
            G++  C  +K     VTI  YE +P                          FQLY  G+
Sbjct: 228 TGRDGTCNQNKENAKVVTIDSYEDVPVYDEKALQKAAANQPISVAIEAGGMDFQLYVSGI 287

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F   CG  ++HGV VVGYG + G  YW+V+NSWG +WGEAGY++M RN   S+ G+CGI 
Sbjct: 288 FTGKCGTAVDHGVVVVGYGSEEGMDYWIVRNSWGAAWGEAGYLKMQRNVGKSS-GLCGIT 346

Query: 331 MQASYPVK 338
           ++ SYPVK
Sbjct: 347 IEPSYPVK 354


>gi|5823018|gb|AAD53011.1|AF089848_1 senescence-specific cysteine protease [Brassica napus]
          Length = 346

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 192/319 (60%), Gaps = 38/319 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFA 111
           D   M+++ + W+ ++ R Y   +E   R+ ++  NV+ I+ +N+     +FKL  N+FA
Sbjct: 30  DELIMQKKHDEWMAEHGRTYADMNEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFA 89

Query: 112 DLSNEEFISTYLGYNKPY----------NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           DL+N+EF   Y GY   +             R+ +V +  LP +VDWRK+GAVTP+K+QG
Sbjct: 90  DLTNDEFRFMYTGYKGDFVLFSQSQTKSTSFRYQNVFFGALPIAVDWRKKGAVTPIKNQG 149

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CG CWAFSAVAA+EG  ++K GKL+SLSEQ+LVDCD N  + GC+GG M+ AFE I   
Sbjct: 150 SCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCSGGLMDTAFEHIMAT 207

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------------- 260
           GG+TTE +YPY+G++  C+   TK  A +ITGYE +P                       
Sbjct: 208 GGLTTESNYPYKGEDANCKIKSTKPSAASITGYEDVPVNDENALMKAVAHQPVSVGIEGG 267

Query: 261 -YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
            + FQ YS GVF   C   L+H VT VGY +   G KYW++KNSWGT WGE GY+R+ ++
Sbjct: 268 GFDFQFYSSGVFTGECTTYLDHAVTAVGYSQSSAGSKYWIIKNSWGTKWGEGGYMRIKKD 327

Query: 319 SPSSNIGICGILMQASYPV 337
                 G+CG+ M+ASYP 
Sbjct: 328 IKDKE-GLCGLAMKASYPT 345


>gi|255539310|ref|XP_002510720.1| cysteine protease, putative [Ricinus communis]
 gi|223551421|gb|EEF52907.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/304 (47%), Positives = 185/304 (60%), Gaps = 28/304 (9%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ R Y S +E   RF I+  N+ +ID  N +  ++ L  N+FADLS+EEF + 
Sbjct: 47  FESWISRFGRVYESAEEKLERFEIFKDNLFHIDDTNKKVRNYWLGLNEFADLSHEEFKNK 106

Query: 122 YLGYNKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           YLG     ++    P   + + + +P SVDWRK+GAVTPVK+QG CGSCWAFS VAAVEG
Sbjct: 107 YLGLKPDLSKRAQCPEEFTYKDVAIPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEG 166

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
           IN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF +I   GG+  E+DYPY  +  
Sbjct: 167 INQIVTGNLTSLSEQELIDCDT-TYNNGCNGGLMDYAFAYIVANGGLHKEEDYPYIMEEG 225

Query: 238 RCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDEYC 275
            C   K +  AVTI+GY  +P                          FQ YS GVFD +C
Sbjct: 226 TCDMRKEESDAVTISGYHDVPQNSEESLLKALANQPLSIAIEASGRDFQFYSGGVFDGHC 285

Query: 276 GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
           G +L+HGV  VGYG   G  Y +VKNSWG  WGE GYIRM R + S   GICGI   ASY
Sbjct: 286 GTELDHGVAAVGYGTSKGLDYIIVKNSWGPKWGEKGYIRMKRKT-SKPEGICGIYKMASY 344

Query: 336 PVKR 339
           P K+
Sbjct: 345 PTKK 348


>gi|218183|dbj|BAA14403.1| oryzain beta precursor [Oryza sativa Japonica Group]
          Length = 471

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/291 (47%), Positives = 182/291 (62%), Gaps = 32/291 (10%)

Query: 78  EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW 134
           E +RRF ++  N++++D  N+   +   F+L  N+FADL+NEEF +T+LG  K     R 
Sbjct: 69  EHERRFLVFWDNLKFVDAHNARADEGGGFRLGMNRFADLTNEEFRATFLGA-KVAERSRA 127

Query: 135 PSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
              +Y       LP SVDWR++GAV PVK+QGQCGSCWAFSAV+ VE IN+L TG++++L
Sbjct: 128 AGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITL 187

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELV+C  N +N GCNGG M  AF+FI K GG+ TEDDYPY+  + +C  ++     V
Sbjct: 188 SEQELVECSTNGQNSGCNGGLMADAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVV 247

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           +I G+E +P                          FQLY  GVF   CG  L+HGV  VG
Sbjct: 248 SIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVG 307

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG D+G+ YW+V+NSWG  WGE+GY+RM RN  +   G CGI M ASYP K
Sbjct: 308 YGTDNGKDYWIVRNSWGPKWGESGYVRMERNI-NVTTGKCGIAMMASYPTK 357


>gi|2144501|pir||TAGB actinidain (EC 3.4.22.14) precursor - kiwi fruit
 gi|166317|gb|AAA32629.1| actinidin [Actinidia deliciosa]
          Length = 380

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 196/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  +      VTI  YE +P  
Sbjct: 186 QNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVELQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|224081756|ref|XP_002306486.1| predicted protein [Populus trichocarpa]
 gi|222855935|gb|EEE93482.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/305 (49%), Positives = 192/305 (62%), Gaps = 32/305 (10%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG 124
           WL ++ + Y    E   RF I+ +N+++ID  NSQN ++K+   KFADL+NEE+ + +LG
Sbjct: 7   WLAKHGKAYNGLGEEAERFEIFKNNLRFIDEHNSQNHTYKVGLTKFADLTNEEYRAMFLG 66

Query: 125 Y----NKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
                 +   + + PS +Y       LP SVDWR +GAV P+KDQG CGSCWAFS VAAV
Sbjct: 67  TRSDAKRRLMKSKSPSERYAFKAGDKLPESVDWRAKGAVNPIKDQGSCGSCWAFSTVAAV 126

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG+L+SLSEQELVDCD  + N GCNGG M+ AF+FI   GG+ TE DYPY G 
Sbjct: 127 EGINQIVTGELISLSEQELVDCD-RTYNAGCNGGLMDYAFQFIINNGGLDTEKDYPYVGD 185

Query: 236 NDRCQTDKTKHHAVTITGYE---------------------AIPAR-YAFQLYSHGVFDE 273
           +D+C  DK K  AV+I G+E                     AI A   A Q Y  GVF  
Sbjct: 186 DDKCDKDKMKTKAVSIDGFEDVLPYDEKALQKAVAHQPVSVAIEASGMALQFYQSGVFTG 245

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            CG  L+HGV VVGY  ++G  YWLV+NSWGT WGE GYI+M RN   +  G CGI M++
Sbjct: 246 ECGTALDHGVVVVGYASENGLDYWLVRNSWGTEWGEHGYIKMQRNVGDTYTGRCGIAMES 305

Query: 334 SYPVK 338
           SYPVK
Sbjct: 306 SYPVK 310


>gi|302816909|ref|XP_002990132.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
 gi|300142145|gb|EFJ08849.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
          Length = 358

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 33/313 (10%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           S    +E W+  + R Y    E +RRF I+  N +YI+  N Q N ++ L  N FAD+++
Sbjct: 29  SFRALYEKWMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTH 88

Query: 116 EEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +EF + Y G   P +       +Y     LP   DWR +GAV  VK+QG CGSCWAFS V
Sbjct: 89  DEFKALYFGTKVPLSNTIKSGFRYEDATNLPLDTDWRSKGAVATVKNQGACGSCWAFSTV 148

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEG+N++ TG+LVSLSEQELVDCD   +NQGCNGG M+ AFEFI + GG+ +E DYPY
Sbjct: 149 AAVEGVNQIVTGELVSLSEQELVDCD-KQKNQGCNGGLMDSAFEFIIQNGGLDSEADYPY 207

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGV 270
           +  +  C   +   H VTI G+E +PA                         FQLYS GV
Sbjct: 208 KAVSGSCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNFQLYSGGV 267

Query: 271 FDEYCGHQLNHGVTVVGYGEDH-----GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           +  +CG++L+HGV  VGYG           YW+V+NSWG +WGE+GYIR+ RN  SS  G
Sbjct: 268 YTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGESGYIRLQRNVASSR-G 326

Query: 326 ICGILMQASYPVK 338
            CGI M ASYPVK
Sbjct: 327 KCGIAMMASYPVK 339


>gi|38346007|emb|CAD40110.2| OSJNBa0035O13.9 [Oryza sativa Japonica Group]
 gi|125589429|gb|EAZ29779.1| hypothetical protein OsJ_13837 [Oryza sativa Japonica Group]
          Length = 314

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/314 (46%), Positives = 181/314 (57%), Gaps = 35/314 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK--LTDNKFADLSN 115
           M +R E W+ ++ R Y  + E  RR  ++  NV +I+ +N+     K  L +N+FADL+N
Sbjct: 1   MAQRHERWMAKHGRAYADDAEKARRLEVFRDNVAFIESVNAAASQHKFWLEENQFADLTN 60

Query: 116 EEFISTYLGY-------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            EF +T  G        N+     R+ +V    LPASVDWR +GAV PVKDQG CG CWA
Sbjct: 61  AEFRATRTGLRPSSSRGNRAPTSFRYANVSTGDLPASVDWRGKGAVNPVKDQGDCGCCWA 120

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAA+EG  KL TGKLVSLSEQ+LV CDV  E+QGC GG M+ AF+FI K GG+  E 
Sbjct: 121 FSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAES 180

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY   +D+C T      A TI GYE +PA                         FQ Y
Sbjct: 181 DYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRHFQFY 240

Query: 267 SHGVFDEY--CGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
             GV      C  +L+H +T VGYG    G KYWL+KNSWGTSWGE GY+RM R      
Sbjct: 241 KGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMERGVADKE 300

Query: 324 IGICGILMQASYPV 337
            G+CG+ M ASYP 
Sbjct: 301 -GVCGLAMMASYPT 313


>gi|2224808|emb|CAB09697.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
 gi|326502180|dbj|BAK06781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 149/317 (47%), Positives = 185/317 (58%), Gaps = 37/317 (11%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+   +E W   Y  SR     D  +RRF ++  N +Y+   N ++  F+L  NKFAD+
Sbjct: 35  ESLRGLYERWRSHYTVSRRGLGADAEERRFNVFKENARYVHEGNKRDRPFRLALNKFADM 94

Query: 114 SNEEFISTYLGYNKPYN---------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           + +EF  TY G    ++         +  +       LP +VDWR++GAVT +KDQGQCG
Sbjct: 95  TTDEFRRTYAGSRVRHHLSLSGGRRGDGGFRYADADNLPPAVDWRQKGAVTAIKDQGQCG 154

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS + AVEGINK++TGKLVSLSEQEL+DCD N  NQGC GG M+ AF+FI K  G+
Sbjct: 155 SCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD-NVNNQGCEGGLMDYAFQFIQK-NGI 212

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY+G+   C   K    AVTI GYE +PA                         
Sbjct: 213 TTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGQD 272

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   C   L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R   S
Sbjct: 273 FQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGV-S 331

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI MQASYP K
Sbjct: 332 QTEGLCGIAMQASYPTK 348


>gi|194352750|emb|CAQ00103.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326514262|dbj|BAJ92281.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519402|dbj|BAJ96700.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524351|dbj|BAK00559.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531998|dbj|BAK01375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 189/314 (60%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + + E FE WL ++ + Y S +E   RF ++  N+++ID IN +  S+ L  N+FADL++
Sbjct: 43  ERLVELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKINREVTSYWLGLNEFADLTH 102

Query: 116 EEFISTYLGYNKP------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           +EF + YLG +            R+  V    LP SVDWRK+GAVT VK+QGQCGSCWAF
Sbjct: 103 DEFKAAYLGLDAAPARRGSSRSFRYEDVSASDLPKSVDWRKKGAVTEVKNQGQCGSCWAF 162

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S VAAVEGIN + TG L +LSEQEL+DC V+  N GCNGG M+ AF +I   GG+ TE+ 
Sbjct: 163 STVAAVEGINAIVTGNLTALSEQELIDCSVDG-NSGCNGGLMDYAFSYIASSGGLHTEEA 221

Query: 230 YPYRGKNDRC-QTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           YPY  +   C    K +  AVTI+GYE +PA                         FQ Y
Sbjct: 222 YPYLMEEGSCGDGKKAESEAVTISGYEDVPANDEQALIKALAHQPVSVAIEASGRHFQFY 281

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGE--KYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           S GVFD  CG QL+HGV  VGYG D G+   Y +V+NSWG  WGE GYIRM R + S+  
Sbjct: 282 SGGVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAQWGEKGYIRMKRGT-SNGE 340

Query: 325 GICGILMQASYPVK 338
           G+CGI   ASYP K
Sbjct: 341 GLCGINKMASYPTK 354


>gi|357156854|ref|XP_003577598.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 368

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 190/325 (58%), Gaps = 44/325 (13%)

Query: 56  QSMEERFENWLKQYS----------REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKL 105
           +S+   +E W  +Y+          R   ++ +  RRF ++  NV+YI   N ++  F+L
Sbjct: 32  ESLRGLYERWRSRYTVSPSTPGSGLRGKLADHDPARRFNVFKENVKYIHEANKKDRPFRL 91

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG---------LPASVDWRKEGAVTP 156
             NKFAD++ +E   +Y G    ++       +  G         LP +VDWR++GAVT 
Sbjct: 92  ALNKFADMTTDELRHSYAGSRVRHHRALSGGRRAQGNFTYSDAENLPPAVDWREKGAVTG 151

Query: 157 VKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFE 216
           +KDQGQCGSCWAFS +AAVE INK++TGKLVSLSEQEL+DCD N  +QGC+GG M+ AF+
Sbjct: 152 IKDQGQCGSCWAFSTIAAVESINKIRTGKLVSLSEQELMDCD-NVNDQGCDGGLMDYAFQ 210

Query: 217 FITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------- 260
           FI K GGVT+E +YPY+G+ + C   K   H V I GYE +PA                 
Sbjct: 211 FIQKNGGVTSEANYPYQGQQNTCDQAKENTHDVAIDGYEDVPANDESALQKAVAYQPVSV 270

Query: 261 ------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYI 313
                   FQ YS GVF   C   L+HGV  VGYG    G KYW+VKNSWG  WGE GYI
Sbjct: 271 AIEASGQDFQFYSEGVFTGQCTTDLDHGVAAVGYGTARDGTKYWIVKNSWGLDWGEKGYI 330

Query: 314 RMARNSPSSNIGICGILMQASYPVK 338
           RM R    +  G+CGI MQASYP+K
Sbjct: 331 RMQRGVSQAE-GLCGIAMQASYPIK 354


>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 191/315 (60%), Gaps = 31/315 (9%)

Query: 54  DPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           D +SM+   E FE+W+ ++ + Y S +E   RF I+  N+++ID  N    ++ L  N+F
Sbjct: 36  DLKSMDKLIELFESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEF 95

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ADLS++EF + YLG    Y+  R    ++    + LP SVDWRK+GAV PVK+QG CGSC
Sbjct: 96  ADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSC 155

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF FI + GG+  
Sbjct: 156 WAFSTVAAVEGINQIVTGNLTSLSEQELIDCD-RTYNNGCNGGLMDYAFSFIVENGGLHK 214

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+DYPY  +   C+  K +   VTI+GY  +P                      +   FQ
Sbjct: 215 EEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQ 274

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            YS GVFD +CG  L+HGV  VGYG   G  Y +VKNSWG+ WGE GYIRM RN      
Sbjct: 275 FYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEKGYIRMRRNIGKPE- 333

Query: 325 GICGILMQASYPVKR 339
           GICGI   ASYP K+
Sbjct: 334 GICGIYKMASYPTKK 348


>gi|37780041|gb|AAP32193.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 153/349 (43%), Positives = 202/349 (57%), Gaps = 36/349 (10%)

Query: 22  RMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDE 78
           + ++    L LFL    G        GY  + D +SM+   E FE+W+ ++ + Y + +E
Sbjct: 7   KTLVLTCSLCLFLSLAFGRDFSIV--GYSSE-DLKSMDKLIELFESWMSRHGKIYETIEE 63

Query: 79  WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
              RF ++  N+++ID  N    ++ L  N+FADLS++EF + YLG     ++ R  S +
Sbjct: 64  KLLRFEVFKDNLKHIDERNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVNLSQRRESSNE 123

Query: 139 Y------LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
                  + LP SVDWRK+GAVTPVK+QGQCGSCWAFS VAAVEGIN++ TG L SLSEQ
Sbjct: 124 EEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 183

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           EL+DCD  + N GCNGG M+ AF FI + GG+  EDDYPY  +   C+  K +   VTI 
Sbjct: 184 ELIDCDT-TYNNGCNGGLMDYAFSFIVQNGGLHKEDDYPYIMEESTCEMKKEETQVVTIN 242

Query: 253 GYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GY  +P                      +   FQ YS GVFD +CG  L+HGV+ VGYG 
Sbjct: 243 GYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGT 302

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
                Y +VKNSWG  WGE G+IRM RN      GICG+   ASYP K+
Sbjct: 303 SKNLDYIIVKNSWGAKWGEKGFIRMKRNIGKPE-GICGLYKMASYPTKK 350


>gi|40806500|gb|AAR92155.1| putative cysteine protease 2 [Iris x hollandica]
          Length = 359

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/349 (42%), Positives = 202/349 (57%), Gaps = 44/349 (12%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER----FENWLKQY--SREYGSEDEWQR 81
           A  S+ L  V+ +     +   P      + EE     +E W   +  SR+     E  +
Sbjct: 2   ATKSMLLALVVALAFVGVARTIPFNEKDLASEESLWGLYERWRSHHTVSRDL---SEKNK 58

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG 141
           RF ++  N ++I   N ++  +KL  NKFAD++N+EF STY G    ++  +  + +  G
Sbjct: 59  RFNVFKENAKFIHEFNKKDAPYKLGLNKFADMTNQEFRSTYAGSKIHHHRTQRGTPRATG 118

Query: 142 ---------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
                    +PASVDWR +GAV PVKDQGQCGSCWAFS +A+VEGINK+KT +LV LS Q
Sbjct: 119 SFMYENVHSIPASVDWRTQGAVAPVKDQGQCGSCWAFSTIASVEGINKIKTNQLVPLSGQ 178

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           +LVDCD + +N+GCNGG M+ AFEFI   GG+T+E  YPY  +   C ++ +    VTI 
Sbjct: 179 QLVDCDTD-QNEGCNGGLMDYAFEFIKSNGGITSESAYPYTAEQGSCASESSA-PVVTID 236

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +PA                        AFQ YS GVF   CG++L+HGV VVGYG 
Sbjct: 237 GYEDVPANNEAALMKAVANQVVSVAIEASGMAFQFYSEGVFTGSCGNELDHGVAVVGYGA 296

Query: 291 DH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYW+V+NSWG  WGE GYIRM R   + + G+CGI M+ SYP+K
Sbjct: 297 TRDGTKYWIVRNSWGAEWGEKGYIRMQRGIRARH-GLCGIAMEPSYPLK 344


>gi|356517308|ref|XP_003527330.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/349 (42%), Positives = 200/349 (57%), Gaps = 40/349 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           M    +N  L LFL+  +      W S    ++       ER E W+ QY R Y    E 
Sbjct: 1   MNSFSQNHYLILFLVLAV------WTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEK 54

Query: 80  QRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN------EP 132
           ++RF ++ +NV +I+  N+  +  F L+ N+FADL++EEF +  +   K  +      E 
Sbjct: 55  EKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTET 114

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
            +       +PA++DWRK GAVTP+KDQG+CGSCWAFSAVAA EGI+++ TGKLV LSEQ
Sbjct: 115 SFRYESVTKIPATIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLSEQ 174

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDC V  E++GC GGY++ AFEFI K GG+ +E  YPY+G N  C+  K  H    I 
Sbjct: 175 ELVDC-VKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAEIK 233

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFD-EYCGHQLNHGVTVVGYG 289
           GYE +P+                       +AF+ YS G+F+   CG   NH V VVGYG
Sbjct: 234 GYEKVPSNNEKALLKAVANQPVSVYIDAGTHAFKYYSSGIFNARNCGTDPNHAVAVVGYG 293

Query: 290 ED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +   G KYWLVKNSWGT WGE GYIR+ R+  +   G+CGI     YP 
Sbjct: 294 KALDGSKYWLVKNSWGTEWGERGYIRIKRDIRAKE-GLCGIAKYPYYPT 341


>gi|146215976|gb|ABQ10190.1| actinidin Act1b [Actinidia arguta]
          Length = 380

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 194/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L + + A++     K     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLVLSLAFNAKNLTKRTNDELKAMYESWLTKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+++  N+FAD +NEEF STYLG+    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYRVGLNQFADQTNEEFQSTYLGFTSGSNKMKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP  VDWR  GAV  +K QGQCGSCWAFSA+A VEGINK+ TG L+SLSEQELVDC   
Sbjct: 127 -LPDYVDWRSAGAVVDIKSQGQCGSCWAFSAIATVEGINKIVTGDLISLSEQELVDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GC+GG +   F+FI   GG+ TE +YPY  ++ +C  D       +I  YE +P  
Sbjct: 186 QNTRGCDGGSITDGFQFIINNGGINTEANYPYTAEDGQCNLDLQNEKYASIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AFQ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVAYQPVSVALEAAGDAFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GYIR+ RN   +  G CGI  + SYPVK
Sbjct: 306 VKNSWDTTWGEEGYIRILRNVGGA--GTCGIATKPSYPVK 343


>gi|297809383|ref|XP_002872575.1| hypothetical protein ARALYDRAFT_911472 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318412|gb|EFH48834.1| hypothetical protein ARALYDRAFT_911472 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 371

 Score =  270 bits (690), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 145/308 (47%), Positives = 190/308 (61%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           F++W+ ++ + YGS  E +RR  I+  N+++I   N++NLS++L   +FADLS  E+   
Sbjct: 56  FDSWMVKHGKVYGSVAEKERRLTIFEDNLRFISNRNAENLSYRLGLTQFADLSLHEYGEV 115

Query: 122 YLGYNK--PYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G +   P N        R+ +     LP SVDWR EGAVT VKDQG C SCWAFS V 
Sbjct: 116 CHGADPRPPRNHVFMTSSDRYKTSAGDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVG 175

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI K GG+ T++DYPY+
Sbjct: 176 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKVETAYEFIMKNGGLGTDNDYPYK 233

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C    K  +  V I G+E +PA                         FQLY  GV
Sbjct: 234 AVNGVCDGRLKENNKNVMIDGFENLPANDEFALMKAVAHQPVTAVIDSSSREFQLYESGV 293

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YWLVKNS G +WGEAGY++MARN  +   G+CGI 
Sbjct: 294 FDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGNTWGEAGYMKMARNIANPR-GLCGIA 352

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 353 MRASYPLK 360


>gi|125547258|gb|EAY93080.1| hypothetical protein OsI_14881 [Oryza sativa Indica Group]
          Length = 314

 Score =  270 bits (689), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/314 (46%), Positives = 181/314 (57%), Gaps = 35/314 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK--LTDNKFADLSN 115
           M +R E W+ ++ R Y  + E  RR  ++  NV +I+ +N+     K  L +N+FADL+N
Sbjct: 1   MAQRHERWMAKHGRAYADDAEKVRRLEVFRDNVAFIESVNAAASQHKFWLEENQFADLTN 60

Query: 116 EEFISTYLGY-------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            EF +T  G        N+     R+ +V    LPASVDWR +GAV PVKDQG CG CWA
Sbjct: 61  AEFRATRTGLRPSSSRGNRAPTSFRYANVSTGDLPASVDWRGKGAVNPVKDQGDCGCCWA 120

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAA+EG  KL TGKLVSLSEQ+LV CDV  E+QGC GG M+ AF+FI K GG+  E 
Sbjct: 121 FSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAES 180

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY   +D+C T      A TI GYE +PA                         FQ Y
Sbjct: 181 DYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRHFQFY 240

Query: 267 SHGVFDEY--CGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
             GV      C  +L+H +T VGYG    G KYWL+KNSWGTSWGE GY+RM R      
Sbjct: 241 KGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMERGVADKE 300

Query: 324 IGICGILMQASYPV 337
            G+CG+ M ASYP 
Sbjct: 301 -GVCGLAMMASYPT 313


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  270 bits (689), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 183/307 (59%), Gaps = 30/307 (9%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E+F  W  ++ + Y   ++   RF ++  N+ YI + +  N ++ L   KFADL+NEEF 
Sbjct: 52  EQFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRH-SETNRTYSLGLTKFADLTNEEFR 110

Query: 120 STYLG--YNKPYNEPRWPSVQYLG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
             Y G   ++     R    +Y     P SVDWRK GAVT VKDQG CGSCWAFSAV +V
Sbjct: 111 RMYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKDQGSCGSCWAFSAVGSV 170

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN ++ G+ VSLSEQELVDCD+   NQGCNGG M+ AF+FI + GG+ TE DYPY+G 
Sbjct: 171 EGINAIRNGEAVSLSEQELVDCDLEY-NQGCNGGLMDYAFDFIIQNGGIDTEKDYPYKGF 229

Query: 236 NDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDE 273
           + RC   K   H VTI GYE +P                          FQLY+ GVF  
Sbjct: 230 DGRCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQLYAQGVFSG 289

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN--IGICGILM 331
            CG  L+HGV  VGYG + G  YW+VKNSWG  WGE+GY+RM RN   SN   G+CGI +
Sbjct: 290 ECGTDLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGESGYLRMKRNMKDSNDGPGLCGINI 349

Query: 332 QASYPVK 338
           + SY VK
Sbjct: 350 EPSYAVK 356


>gi|312451845|gb|ADQ85986.1| actinidin [Actinidia chinensis]
          Length = 380

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 194/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNG Y+   F FI   GG+ TE++YPY  ++  C  D      VTI  YE +P  
Sbjct: 186 QNTRGCNGSYITDGFPFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|388497270|gb|AFK36701.1| unknown [Lotus japonicus]
          Length = 343

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/349 (43%), Positives = 210/349 (60%), Gaps = 41/349 (11%)

Query: 23  MMLRNAVLSL-FLLWVLGIPAGAWSEGYPQKYDPQS--MEERFENWLKQYSREYGSEDEW 79
           M   N +++L  +LW     A A++      YD  S  + +  + W+ QY R Y ++ E 
Sbjct: 1   MKHLNPIIALCTMLW-----ACAYTAMSRTLYDETSSVVAKTHQQWMLQYGRSYTNDAEM 55

Query: 80  QRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEFISTYLGY-------NKPYN 130
           ++RF I+  N++YI+  N+   N S+KL  N+F+DL+NEEFI+++ G        +    
Sbjct: 56  EKRFKIFMENLEYIEKFNNAPGNKSYKLDLNQFSDLTNEEFIASHTGLMIDPSKPSSSSK 115

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
                S+     P S+DWR++GAVT VK+QG CGSCWAFSAVAAVEGI K+K G L+SLS
Sbjct: 116 RASPASLDLSDTPTSLDWREQGAVTDVKNQGNCGSCWAFSAVAAVEGIVKIKNGNLISLS 175

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ+LVDC  N +NQGC GG+M+ AF +IT+  G+ +E+DY YRG    CQ ++    A  
Sbjct: 176 EQQLVDCASNEQNQGCGGGFMDNAFSYITE-NGIASENDYQYRGGAGTCQNNEMITPAAR 234

Query: 251 ITGYEAIPA--------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYG- 289
           I+GYE +PA                      +F LY  G++   CG  LNHGVT+VGYG 
Sbjct: 235 ISGYEDVPAGEDQLLLAVSQQPVSVAIAVGQSFHLYKEGIYSGPCGSSLNHGVTLVGYGT 294

Query: 290 -EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            E+ G KYWL+KNSWG SWGE GY+R+ R S  S  G CGI ++AS+P 
Sbjct: 295 SEEDGTKYWLIKNSWGESWGENGYMRLLRESGQSE-GHCGIAVKASHPT 342


>gi|356515056|ref|XP_003526217.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/351 (43%), Positives = 203/351 (57%), Gaps = 44/351 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           M    +N  L LFL  VL +    W S    ++       ER E W+ QY R Y    E 
Sbjct: 1   MNSFSQNHYLILFL--VLSV----WTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEK 54

Query: 80  QRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN-------- 130
           ++RF ++ +NV +I+  N+  +  F L+ N+FADL++EEF +  +   K  +        
Sbjct: 55  EKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTQT 114

Query: 131 EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             R+ SV    +PA++DWRK GAVTP+KDQG+CGSCWAFSAVAA EGI+++ TGKLV LS
Sbjct: 115 SFRYESVT--KIPATIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLS 172

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDC V  E++GC GGY++ AFEFI K GG+ +E  YPY+G N  C+  K  H    
Sbjct: 173 EQELVDC-VKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAE 231

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFD-EYCGHQLNHGVTVVG 287
           I GYE +P+                       +AF+ YS G+F+   CG   NH V VVG
Sbjct: 232 IKGYEKVPSNNEKALLKAVANQPVSVYIDAGTHAFKYYSSGIFNVRNCGTDPNHAVAVVG 291

Query: 288 YGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YG+   G KYWLVKNSWGT WGE GYIR+ R+  +   G+CGI     YP 
Sbjct: 292 YGKALDGSKYWLVKNSWGTEWGERGYIRIKRDIRAKE-GLCGIAKYPYYPT 341


>gi|190358935|sp|P00785.4|ACTN_ACTCH RecName: Full=Actinidain; Short=Actinidin; AltName: Allergen=Act c
           1; Flags: Precursor
 gi|12744965|gb|AAK06862.1|AF343446_1 actinidin protease [Actinidia chinensis]
          Length = 380

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 195/340 (57%), Gaps = 37/340 (10%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +SL     L I + A++     +     ++  +E+WL +Y + Y S  EW+RRF I+   
Sbjct: 10  MSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL++EEF STYL +    N        EPR   V   
Sbjct: 70  LRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQV--- 126

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC   
Sbjct: 127 -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 185

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D      VTI  YE +P  
Sbjct: 186 QNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYN 245

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 246 NEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWI 305

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 306 VKNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 343


>gi|356559055|ref|XP_003547817.1| PREDICTED: cysteine proteinase RD21a [Glycine max]
          Length = 366

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 150/340 (44%), Positives = 192/340 (56%), Gaps = 39/340 (11%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           LFL + L     A        Y    +   +E WL ++ + Y    E  +RF ++  N+ 
Sbjct: 13  LFLSFTLSC---AIDTSTITNYTDNEVMTMYEEWLVKHQKVYNGLREKDKRFQVFKDNLG 69

Query: 92  YI-DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG--------- 141
           +I ++ N+QN ++KL  N+FAD++NEE+   Y G  K   + R    +  G         
Sbjct: 70  FIQEHNNNQNNTYKLGLNQFADMTNEEYRVMYFG-TKSDAKRRLMKTKSTGHRYAYSAGD 128

Query: 142 -LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP  VDWR +GAV P+KDQG CGSCWAFS VA VE INK+ TGK VSLSEQELVDCD  
Sbjct: 129 RLPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCD-R 187

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
           + N+GCNGG M+ AFEFI + GG+ T+ DYPYRG +  C   K     V I G+E +P  
Sbjct: 188 AYNEGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGFEDVPPY 247

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               +    QLY  GVF   CG  L+HGV VVGYG ++G  YWL
Sbjct: 248 DENALKKAVAHQPVSIAIEASGRDLQLYQSGVFTGKCGTSLDHGVVVVGYGSENGVDYWL 307

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           V+NSWGT WGE GY +M RN  +   G CGI M+ASYPVK
Sbjct: 308 VRNSWGTGWGEDGYFKMQRNVRTPT-GKCGITMEASYPVK 346


>gi|312282059|dbj|BAJ33895.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/308 (46%), Positives = 188/308 (61%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + Y S  E +RR  I+  N+++I   NS+NL ++L  N+FADLS  E+   
Sbjct: 64  FESWIVKHGKVYDSVAEKERRLTIFKDNLRFITNRNSENLGYRLGLNRFADLSLHEYKEI 123

Query: 122 YLGYN-KP-------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G + KP        +  R+ +     LP SVDWR EGAVT VKDQG C SCWAFS V 
Sbjct: 124 CHGADPKPPRNHVFMSSSDRYKTSAGDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVG 183

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI   GG+ T++DYPY+
Sbjct: 184 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKVETAYEFIVSNGGLGTDNDYPYK 241

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C    K     V I GYE +PA                         FQLY  GV
Sbjct: 242 AVNGACDGRLKENIKNVMIDGYENLPANDELALMKAVAHQPVTAVIDSSSREFQLYESGV 301

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YW+V+NSWG +WGEAGY++MARN  +   G+CGI 
Sbjct: 302 FDGRCGTNLNHGVVVVGYGTENGRNYWIVRNSWGNTWGEAGYMKMARNIANPR-GLCGIA 360

Query: 331 MQASYPVK 338
           M+ SYP+K
Sbjct: 361 MRVSYPLK 368


>gi|302142276|emb|CBI19479.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 179/300 (59%), Gaps = 48/300 (16%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y +  E +RRF I+  N+++ID  N++N ++K++D              
Sbjct: 4   YEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKISD-------------- 49

Query: 122 YLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
                      R+       LP SVDWRK+GAV  VKDQG CGSCWAFS +AAVEGINK+
Sbjct: 50  -----------RYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGINKI 98

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
            TG L+SLSEQELVDCD  S N+GCNGG M+ AFEFI   GG+ +E+DYPY+  + RC  
Sbjct: 99  VTGGLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRCDQ 157

Query: 242 DKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQL 279
            +     VTI GYE +P                          FQLY  G+F   CG  L
Sbjct: 158 YRKNAKVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQLYQSGIFTGRCGTAL 217

Query: 280 NHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           +HGVT VGYG ++G  YW+VKNSWG SWGE GYIRM R+  +S  G CGI M+ASYP+K+
Sbjct: 218 DHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEASYPIKK 277


>gi|302816222|ref|XP_002989790.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
 gi|300142356|gb|EFJ09057.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
          Length = 358

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/314 (45%), Positives = 186/314 (59%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLS 114
           +S    +E W+  + R Y    E +RRF I+  N +YI+  N Q N ++ L  N FAD++
Sbjct: 28  RSFRALYEKWMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMT 87

Query: 115 NEEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           ++EF + Y G   P +       +Y     LP   DWR +GAV  VK+QG CGSCWAFS 
Sbjct: 88  HDEFKALYFGTKVPLSNTIKSGFRYKDATNLPLDTDWRSKGAVATVKNQGACGSCWAFST 147

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VAAVEG+N++ TG+LVSLSEQELVDCD   +NQGCNGG M+ AFEFI + GG+ +E DYP
Sbjct: 148 VAAVEGVNQIVTGELVSLSEQELVDCD-KQKNQGCNGGLMDSAFEFIIQNGGLDSEADYP 206

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHG 269
           Y+  +  C   +   H VTI G+E +PA                         FQLYS G
Sbjct: 207 YKAVSGSCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNFQLYSGG 266

Query: 270 VFDEYCGHQLNHGVTVVGYGEDH-----GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           V+  +CG++L+HGV  VGYG           YW+V+NSWG +WGE+GYIR+ RN  S   
Sbjct: 267 VYTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGESGYIRLQRNVASPR- 325

Query: 325 GICGILMQASYPVK 338
           G CGI M ASYPVK
Sbjct: 326 GKCGIAMMASYPVK 339


>gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis]
 gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis]
          Length = 422

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/306 (45%), Positives = 192/306 (62%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           FE+W K++ + Y S+++   RF I+  N +++   NSQ N S+ L+ N FADL++ EF +
Sbjct: 32  FESWTKEHGKTYTSKEDKLYRFKIFEENYEFVKKHNSQGNSSYTLSLNAFADLTHHEFKA 91

Query: 121 TYLGYNK-----PYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           + LG +        +   +P   ++G +P S+DWRK+GAV+ VKDQG CG+CW+FSA  A
Sbjct: 92  SRLGLSAFSTSGKLSRRNFPLHDFVGDVPISIDWRKKGAVSQVKDQGNCGACWSFSATGA 151

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EGINK+ TG LVSLSEQELVDCD  S N GC GG M+ A++F+ +  G+ TE+DYPY+ 
Sbjct: 152 IEGINKIVTGSLVSLSEQELVDCD-RSYNNGCEGGLMDYAYQFVIENNGIDTEEDYPYQA 210

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
           +   C  +K K H VTI GY  +P                      +  AFQLYS G+F 
Sbjct: 211 REKTCNKEKLKRHVVTIDGYTDVPQNNEKELLKAVAAQPVSVGICGSERAFQLYSKGIFT 270

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             C   L+H V +VGYG ++G  YW+VKNSWGT WG  GY+ M RNS +S  G+CGI M 
Sbjct: 271 GPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTHWGINGYMYMLRNSGNSQ-GLCGINML 329

Query: 333 ASYPVK 338
           AS+PVK
Sbjct: 330 ASFPVK 335


>gi|356563155|ref|XP_003549830.1| PREDICTED: vignain-like [Glycine max]
          Length = 361

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 183/310 (59%), Gaps = 36/310 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E W   ++    S DE   RF ++  NV ++   N  +  +KL  N+FAD++N EF S 
Sbjct: 40  YERWRSHHTVSR-SLDEKHNRFNVFKGNVMHVHSSNKMDKPYKLKLNRFADMTNHEFRSI 98

Query: 122 YLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           Y G    ++      PR            +P+SVDWRK+GAVT VKDQGQCGSCWAFS +
Sbjct: 99  YAGSKVNHHRMFRGTPRGNGTFMYQNVDRVPSSVDWRKKGAVTDVKDQGQCGSCWAFSTI 158

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVEGIN++KT KLV LSEQELVDCD  ++NQGCNGG ME AFEFI +  G+TT  +YPY
Sbjct: 159 VAVEGINQIKTHKLVPLSEQELVDCDT-TQNQGCNGGLMESAFEFIKQY-GITTASNYPY 216

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             K+  C   K    AV+I G+E +P                          FQ YS GV
Sbjct: 217 EAKDGTCDASKVNEPAVSIDGHENVPVNNEAALLKAVAHQPVSVAIEAGGIDFQFYSEGV 276

Query: 271 FDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F   CG  L+HGV +VGYG    G KYW VKNSWG+ WGE GYIRM R S S   G+CGI
Sbjct: 277 FTGNCGTALDHGVAIVGYGTTQDGTKYWTVKNSWGSEWGEKGYIRMKR-SISVKKGLCGI 335

Query: 330 LMQASYPVKR 339
            M+ASYP+K+
Sbjct: 336 AMEASYPIKK 345


>gi|357458909|ref|XP_003599735.1| Cysteine proteinase [Medicago truncatula]
 gi|357474677|ref|XP_003607623.1| Cysteine proteinase [Medicago truncatula]
 gi|355488783|gb|AES69986.1| Cysteine proteinase [Medicago truncatula]
 gi|355508678|gb|AES89820.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/343 (41%), Positives = 205/343 (59%), Gaps = 39/343 (11%)

Query: 27  NAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIY 86
           N ++ +FL++   +     S    + Y    +  + E W+ Q+ + Y    E ++RF I+
Sbjct: 6   NFIIPMFLIFTTWMLPYVMSSRVLEPY----LSNKHEKWMTQFGKSYKDAAEKEKRFQIF 61

Query: 87  SSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE----PRWPSVQY-- 139
            +NV++I+  N+  N  F L+ N FADL+NEEF ++  G  K +++        S +Y  
Sbjct: 62  KNNVEFIELFNAVGNKPFNLSINHFADLTNEEFKASLNGNKKLHDKFDILNETTSFRYHN 121

Query: 140 -LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              +PAS+DWRK GAVTP+K+QG CGSCWAFS VA++EGI+++ TG+LVSLSEQEL+DC 
Sbjct: 122 VTSVPASMDWRKRGAVTPIKNQGSCGSCWAFSTVASIEGIHQITTGELVSLSEQELIDC- 180

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
           V   + GC+GGY+E AF+FI K GG+ +E +YPY+  +++C+  K   H   I GYE +P
Sbjct: 181 VRGNSSGCSGGYLEDAFKFIAKKGGMASETNYPYKETDEKCKFKKESKHVAEIKGYEKVP 240

Query: 259 AR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE--DHGE 294
           +                       Y FQ YS G+F   CG   +H VT+VGYG   D+ E
Sbjct: 241 SNSENDLLKAVANQPVSVYVDAGDYVFQFYSGGIFTGKCGTDTDHVVTIVGYGVSLDYTE 300

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YWLVKNSWGT WGE GY+++ RN  S   G+CGI    SYPV
Sbjct: 301 -YWLVKNSWGTGWGEKGYMKLKRNVDSKK-GLCGIATNPSYPV 341


>gi|18413507|ref|NP_567377.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315953|sp|Q9SUS9.1|CPR4_ARATH RecName: Full=Probable cysteine proteinase At4g11320; Flags:
           Precursor
 gi|5596478|emb|CAB51416.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|7267831|emb|CAB81233.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|14334764|gb|AAK59560.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|15293257|gb|AAK93739.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332657596|gb|AEE82996.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 371

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/308 (47%), Positives = 190/308 (61%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + Y S  E +RR  I+  N+++I   N++NLS++L  N+FADLS  E+   
Sbjct: 56  FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEI 115

Query: 122 YLGYNK--PYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             G +   P N        R+ +     LP SVDWR EGAVT VKDQG C SCWAFS V 
Sbjct: 116 CHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVG 175

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEG+NK+ TG+LV+LSEQ+L++C  N EN GC GG +E A+EFI   GG+ T++DYPY+
Sbjct: 176 AVEGLNKIVTGELVTLSEQDLINC--NKENNGCGGGKVETAYEFIMNNGGLGTDNDYPYK 233

Query: 234 GKNDRCQTD-KTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
             N  C+   K  +  V I GYE +PA                         FQLY  GV
Sbjct: 234 ALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV 293

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           FD  CG  LNHGV VVGYG ++G  YW+VKNS G +WGEAGY++MARN  +   G+CGI 
Sbjct: 294 FDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPR-GLCGIA 352

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 353 MRASYPLK 360


>gi|357162587|ref|XP_003579458.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 470

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/296 (45%), Positives = 185/296 (62%), Gaps = 35/296 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEFISTYLGYNKPYNE-- 131
           E +RRF  +  N++++D  N++  +    F+L  N+FADL+N+EF + YLG         
Sbjct: 69  EEERRFRAFWDNLRFVDAHNARAAAGEEGFRLGMNRFADLTNDEFRAAYLGVKGAGQRRS 128

Query: 132 ------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK 185
                  R+       LP +VDWR++GAV PVK+QGQCGSCWAFSAV+AVE IN+L TG+
Sbjct: 129 ARAGVGERYRHDGVEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSAVESINQLVTGE 188

Query: 186 LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK 245
           LV+LSEQELV+CD+N ++ GCNGG M+ AF+FI   GG+ TEDDYPY+  + +C  ++  
Sbjct: 189 LVTLSEQELVECDINGQSNGCNGGLMDDAFDFIINNGGIDTEDDYPYKALDGKCDINRRN 248

Query: 246 HHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGV 283
              V+I G+E +P                          FQLY  GVF   CG +L+HGV
Sbjct: 249 AKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFTGRCGTELDHGV 308

Query: 284 TVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
             VGYG ++G+ YW+V+NSWG  WGEAGY+RM RN  ++  G CGI M +SYP K+
Sbjct: 309 VAVGYGTENGKDYWIVRNSWGPKWGEAGYLRMERN-INATTGKCGIAMMSSYPTKK 363


>gi|111073717|dbj|BAF02547.1| triticain beta [Triticum aestivum]
          Length = 472

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/294 (45%), Positives = 184/294 (62%), Gaps = 33/294 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEFISTYLGYNKPYNEP- 132
           E +RRF  +  N+ ++D  N++  +    ++L  N+FADL+N+EF + YLG       P 
Sbjct: 73  ERERRFRAFWDNLNFVDAHNARAAAGEEGYRLGMNRFADLTNDEFRAAYLGVKAQRARPG 132

Query: 133 -----RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
                R+       LP +VDWR++GAV PVK+QGQCGSCWAFSAV+ VE IN++ TG++V
Sbjct: 133 RMVGERYRHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMV 192

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           +LSEQELV+CD N ++ GCNGG M+ AFEFI K GG+ TEDDYPY+  + RC   +    
Sbjct: 193 TLSEQELVECDTNGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAIDGRCDVLRKNAK 252

Query: 248 AVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTV 285
            V+I G+E +P                          FQLY  GVF   CG QL+HGV  
Sbjct: 253 VVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVA 312

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG ++G+ YW+V+NSWG +WGE+GY+RM RN   ++ G CGI M +SYP K+
Sbjct: 313 VGYGTENGKDYWIVRNSWGPNWGESGYLRMERNINVTS-GKCGIAMMSSYPTKK 365


>gi|194352752|emb|CAQ00104.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/312 (47%), Positives = 190/312 (60%), Gaps = 33/312 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           + E FE WL ++ + Y S +E   RF ++  N++ ID IN +  S+ L  N+FADL+++E
Sbjct: 40  LVELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKLIDEINREVTSYWLGLNEFADLTHDE 99

Query: 118 FISTYLGYNKPYNEP------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           F +TYLG + P          R+ +V    LP +VDWRK+GAVT VK+QGQCGSCWAFS 
Sbjct: 100 FKTTYLGLSPPPARRSSSRSFRYENVAAHDLPKAVDWRKKGAVTDVKNQGQCGSCWAFST 159

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VAAVEGIN + TG L +LSEQEL+DC V+  N GCNGG M+ AF +I   GG+ TE+ YP
Sbjct: 160 VAAVEGINAIVTGNLTALSEQELIDCSVDG-NSGCNGGMMDYAFSYIASSGGLHTEEAYP 218

Query: 232 YRGKNDRC-QTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           Y  +   C    K++  AV+I+GYE +P +                        FQ YS 
Sbjct: 219 YLMEEGSCGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQPVSVAIEASGRHFQFYSG 278

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGE--KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           GVFD  CG QL+HGV  VGYG D G+   Y +VKNSWG  WGE GYIRM R +  S  G+
Sbjct: 279 GVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVKNSWGGKWGEKGYIRMKRGTGKSE-GL 337

Query: 327 CGILMQASYPVK 338
           CGI   ASYP K
Sbjct: 338 CGINKMASYPTK 349


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/306 (47%), Positives = 185/306 (60%), Gaps = 36/306 (11%)

Query: 67  KQYSREYGSEDEWQRRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYLG 124
           K  S   G  ++   RF I+  N+++ID  N  ++N ++KL    FA+L+N+E+ S YLG
Sbjct: 13  KSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLG 72

Query: 125 YN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
                       K  N     +V  + +P +VDWR++GAV  +KDQG CGSCWAFS  AA
Sbjct: 73  ARTEPVRRITKAKNVNMKYSAAVNDVEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAA 132

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+ TG+LVSLSEQELVDCD  S NQGCNGG M+ AF+FI K GG+ TE DYPY G
Sbjct: 133 VEGINKIVTGELVSLSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHG 191

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            N +C +       VTI GYE +P++                       AFQ Y  G+F 
Sbjct: 192 TNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFT 251

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  ++H V  VGYG ++G  YW+V+NSWGT WGE GYIRM RN  S + G CGI ++
Sbjct: 252 GKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKS-GKCGIAIE 310

Query: 333 ASYPVK 338
           ASYPVK
Sbjct: 311 ASYPVK 316


>gi|18394919|ref|NP_564126.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
 gi|71153409|sp|Q9LM66.2|XCP2_ARATH RecName: Full=Xylem cysteine proteinase 2; Short=AtXCP2; Flags:
           Precursor
 gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine endopeptidase XCP2 [Arabidopsis thaliana]
 gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis thaliana]
 gi|110743795|dbj|BAE99733.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332191910|gb|AEE30031.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
          Length = 356

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/323 (44%), Positives = 187/323 (57%), Gaps = 41/323 (12%)

Query: 53  YDPQSME------ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLT 106
           Y P+ +E      E FENW+  + + Y + +E   RF ++  N+++ID  N +  S+ L 
Sbjct: 36  YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLG 95

Query: 107 DNKFADLSNEEFISTYLGYN---------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
            N+FADLS+EEF   YLG           + Y E  +  V+   +P SVDWRK+GAV  V
Sbjct: 96  LNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVE--AVPKSVDWRKKGAVAEV 153

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+QG CGSCWAFS VAAVEGINK+ TG L +LSEQEL+DCD  + N GCNGG M+ AFE+
Sbjct: 154 KNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDT-TYNNGCNGGLMDYAFEY 212

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------- 260
           I K GG+  E+DYPY  +   C+  K +   VTI G++ +P                   
Sbjct: 213 IVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVA 272

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
                  FQ YS GVFD  CG  L+HGV  VGYG   G  Y +VKNSWG  WGE GYIR+
Sbjct: 273 IDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRL 332

Query: 316 ARNSPSSNIGICGILMQASYPVK 338
            RN+     G+CGI   AS+P K
Sbjct: 333 KRNTGKPE-GLCGINKMASFPTK 354


>gi|255646088|gb|ACU23531.1| unknown [Glycine max]
          Length = 362

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 148/317 (46%), Positives = 184/317 (58%), Gaps = 39/317 (12%)

Query: 56  QSMEERFENW--LKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S  + +E W   +  SR  G +    +RF ++ +NV ++   N  +  +KL  NKFAD+
Sbjct: 34  ESFWDLYERWRSYRTVSRSLGDK---HKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADM 90

Query: 114 SNEEFISTYLGYNKPYNE-----PRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +N EF STY G    ++      PR        +   +P S DWRK GAVT VKDQGQCG
Sbjct: 91  TNHEFRSTYAGSKVNHHRMFQGTPRGNGTFMYEKVGSVPPSADWRKNGAVTGVKDQGQCG 150

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V AVEGIN++KT KLVSLSEQELVDCD   +N GCNGG ME AFEFI + GG+
Sbjct: 151 SCWAFSTVVAVEGINQIKTNKLVSLSEQELVDCDT-KKNAGCNGGLMESAFEFIKQKGGI 209

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE +YPY  ++  C   K    AV+I G+E +PA                       + 
Sbjct: 210 TTESNYPYTAQDGTCDASKANDLAVSIDGHENVPANDENALLKAVANQPVSVAIDAGGFD 269

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ Y  GVF   C  +LNHGV +VGYG    G  YW V+NSWG  WGE GYIRM R S  
Sbjct: 270 FQFYFEGVFTGDCSTELNHGVAIVGYGTTVDGTNYWTVRNSWGPEWGEQGYIRMQR-SIF 328

Query: 322 SNIGICGILMQASYPVK 338
              G+CGI M ASYP+K
Sbjct: 329 KKEGLCGIAMMASYPIK 345


>gi|186516984|ref|NP_195406.2| cysteine proteinase1 [Arabidopsis thaliana]
 gi|15290508|gb|AAK92229.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332661313|gb|AEE86713.1| cysteine proteinase1 [Arabidopsis thaliana]
          Length = 376

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 178/292 (60%), Gaps = 35/292 (11%)

Query: 81  RRFGIYSSNVQYIDY--INSQNLSFKLTDNKFADLSNEEFISTYLGYN----------KP 128
           +RF I+  N+++ID    N++N ++KL   KF DL+N+E+   YLG            K 
Sbjct: 72  KRFNIFKDNLRFIDLHNENNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKN 131

Query: 129 YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
            N+    +V    +P +VDWR++GAV P+KDQG CGSCWAFS  AAVEGINK+ TG+L+S
Sbjct: 132 VNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELIS 191

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELVDCD  S NQGCNGG M+ AF+FI K GG+ TE DYPYRG   +C +       
Sbjct: 192 LSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRV 250

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I GYE +P +                        FQ Y  G+F   CG  L+H V  V
Sbjct: 251 VSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAV 310

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG ++G  YW+V+NSWG  WGE GYIRM RN  +S  G CGI ++ASYPVK
Sbjct: 311 GYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPVK 362


>gi|356543118|ref|XP_003540010.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 339

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/306 (46%), Positives = 182/306 (59%), Gaps = 29/306 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           M ER E W K+Y + Y    E Q+R  I+  NV++I+  N+  N  +KL+ N   D +NE
Sbjct: 36  MSERHEQWTKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAGNKPYKLSINHLTDQTNE 95

Query: 117 EFISTYLGYNKPYNEPRWPSV--QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           EF++++ GY    +  + P       G+P +VDWR+ GAV  +KDQGQCG+CWAFS VA 
Sbjct: 96  EFVASHNGYKHKGSHSQTPFKYENITGVPNAVDWRENGAVXAMKDQGQCGNCWAFSTVAT 155

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
            EGI ++ T  L+SLSEQELVDCD  S + GC+GGYME  FEFI K GG+++E +YPY  
Sbjct: 156 TEGIYQITTSMLMSLSEQELVDCD--SVDHGCDGGYMEGGFEFIXKNGGISSEANYPYTA 213

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            +     +K    A  I GYE +PA                        AFQ  S GVF 
Sbjct: 214 VDGTYDANKEASPAAQIKGYETVPANSEDALQKAVANQPVSVTIDVGGSAFQFNSSGVFT 273

Query: 273 EYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             CG QL+HGVT VGYG  D G +YW+VKNSWGT WGE GYIRM R + +   G+CGI M
Sbjct: 274 GQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSWGTQWGEEGYIRMQRGTDAQE-GLCGIAM 332

Query: 332 QASYPV 337
            ASYP 
Sbjct: 333 DASYPT 338


>gi|242086591|ref|XP_002439128.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
 gi|241944413|gb|EES17558.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
          Length = 371

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 185/307 (60%), Gaps = 33/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE W+ +Y + Y S +E   RF ++  N+ +ID  N +  ++ L  N FADL+++EF +T
Sbjct: 66  FEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVTTYWLGLNAFADLTHDEFKAT 125

Query: 122 YLGYNKPYNEP------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           YLG  +P  +       R+  V    +PASVDWRK+GAVT VK+QGQCGSCWAFS VAAV
Sbjct: 126 YLGLRQPETKKTTDSRFRYGGVADDDVPASVDWRKKGAVTDVKNQGQCGSCWAFSTVAAV 185

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG L SLSEQELVDC  +  N GCNGG M+ AF +I   GG+ TE+ YPY  +
Sbjct: 186 EGINQIVTGNLTSLSEQELVDCSTDG-NNGCNGGVMDNAFSYIASSGGLRTEEAYPYLME 244

Query: 236 NDRCQTDKTK--HHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
              C  DK +     VTI+GYE +PA                         FQ YS GVF
Sbjct: 245 EGDCD-DKARDGEQVVTISGYEDVPANDEQALVKALAHQPLSVAIEASGRHFQFYSGGVF 303

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
           +  CG +L+HGV  VGYG   G+ Y +VKNSWG+ WGE GYIRM R +     G+CGI  
Sbjct: 304 NGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGSHWGEKGYIRMKRGTGKPE-GLCGINK 362

Query: 332 QASYPVK 338
            ASYP K
Sbjct: 363 MASYPTK 369


>gi|46395939|sp|Q94B08.2|GCP1_ARATH RecName: Full=Germination-specific cysteine protease 1; Flags:
           Precursor
 gi|4006883|emb|CAB16767.1| cysteine proteinase [Arabidopsis thaliana]
 gi|7270637|emb|CAB80354.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 178/292 (60%), Gaps = 35/292 (11%)

Query: 81  RRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYLGYN----------KP 128
           +RF I+  N+++ID  N  ++N ++KL   KF DL+N+E+   YLG            K 
Sbjct: 72  KRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKN 131

Query: 129 YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
            N+    +V    +P +VDWR++GAV P+KDQG CGSCWAFS  AAVEGINK+ TG+L+S
Sbjct: 132 VNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELIS 191

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELVDCD  S NQGCNGG M+ AF+FI K GG+ TE DYPYRG   +C +       
Sbjct: 192 LSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRV 250

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I GYE +P +                        FQ Y  G+F   CG  L+H V  V
Sbjct: 251 VSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAV 310

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG ++G  YW+V+NSWG  WGE GYIRM RN  +S  G CGI ++ASYPVK
Sbjct: 311 GYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPVK 362


>gi|224065647|ref|XP_002301901.1| predicted protein [Populus trichocarpa]
 gi|222843627|gb|EEE81174.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 144/305 (47%), Positives = 187/305 (61%), Gaps = 29/305 (9%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+W+ ++ + Y S +E   RF I+  N+ +ID  N + +++ L  N+F+DLS+EEF + 
Sbjct: 33  FESWISKHGKIYESIEEKWLRFEIFKDNLFHIDETNKKVVNYWLGLNEFSDLSHEEFKNK 92

Query: 122 YLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
           YLG     +E R  S ++     + +P SVDWRK+GAVT VK+QG CGSCWAFS VAAVE
Sbjct: 93  YLGLKVDMSERRECSQEFNYKDVMSIPKSVDWRKKGAVTDVKNQGSCGSCWAFSTVAAVE 152

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           GIN++ TG L SLSEQELVDCD  + N GCNGG M+ AF +I   GG+  E DYPY  + 
Sbjct: 153 GINQIVTGNLTSLSEQELVDCDT-TNNYGCNGGLMDYAFSYIISNGGLHKEVDYPYIMEE 211

Query: 237 DRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDEY 274
             C+  K +   VTI+GY  +P                          FQ YS GVFD +
Sbjct: 212 GTCEMRKEESEVVTISGYHDVPQNSEESLLKALANQPLSVAIEASGRDFQFYSGGVFDGH 271

Query: 275 CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
           CG QL+HGV  VGYG  +G  Y +VKNSWG+ WGE GYIRM RN+     G+CGI   AS
Sbjct: 272 CGTQLDHGVAAVGYGSTNGLDYIIVKNSWGSKWGEKGYIRMKRNTGKP-AGLCGINKMAS 330

Query: 335 YPVKR 339
           YP K+
Sbjct: 331 YPTKK 335


>gi|110737959|dbj|BAF00916.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 178/292 (60%), Gaps = 35/292 (11%)

Query: 81  RRFGIYSSNVQYIDY--INSQNLSFKLTDNKFADLSNEEFISTYLGYN----------KP 128
           +RF I+  N+++ID    N++N ++KL   KF DL+N+E+   YLG            K 
Sbjct: 72  KRFNIFKDNLRFIDLHNENNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKN 131

Query: 129 YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
            N+    +V    +P +VDWR++GAV P+KDQG CGSCWAFS  AAVEGINK+ TG+L+S
Sbjct: 132 VNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELIS 191

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELVDCD  S NQGCNGG M+ AF+FI K GG+ TE DYPYRG   +C +       
Sbjct: 192 LSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRV 250

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I GYE +P +                        FQ Y  G+F   CG  L+H V  V
Sbjct: 251 VSIDGYEDVPTKDETALKKAISYQPVRVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAV 310

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG ++G  YW+V+NSWG  WGE GYIRM RN  +S  G CGI ++ASYPVK
Sbjct: 311 GYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPVK 362


>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  267 bits (682), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 189/315 (60%), Gaps = 31/315 (9%)

Query: 54  DPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           D +SM+   E FE+W+ ++ + Y + +E   RF I+  N+++ID  N    ++ L  N+F
Sbjct: 37  DLKSMDKLIELFESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEF 96

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ADLS+ EF + YLG    Y+  R    ++    + LP SVDWRK+GAV PVK+QG CGSC
Sbjct: 97  ADLSHREFNNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSC 156

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF FI + GG+  
Sbjct: 157 WAFSTVAAVEGINQIVTGNLTSLSEQELIDCD-RTYNNGCNGGLMDYAFSFIVENGGLHK 215

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+DYPY  +   C+  K +   VTI+GY  +P                      +   FQ
Sbjct: 216 EEDYPYIMEEGTCEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQ 275

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            YS GVFD +CG  L+HGV  VGYG   G  Y  VKNSWG+ WGE GYIRM RN      
Sbjct: 276 FYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKPE- 334

Query: 325 GICGILMQASYPVKR 339
           GICGI   ASYP K+
Sbjct: 335 GICGIYKMASYPTKK 349


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  267 bits (682), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 144/306 (47%), Positives = 184/306 (60%), Gaps = 36/306 (11%)

Query: 67  KQYSREYGSEDEWQRRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYLG 124
           K  S   G  ++   RF I+  N+++ID  N  ++N ++KL    FA+L+N+E+ S YLG
Sbjct: 13  KSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLG 72

Query: 125 YN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
                       K  N     +V    +P +VDWR++GAV  +KDQG CGSCWAFS  AA
Sbjct: 73  ARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAA 132

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEGINK+ TG+LVSLSEQELVDCD  S NQGCNGG M+ AF+FI K GG+ TE DYPY G
Sbjct: 133 VEGINKIVTGELVSLSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHG 191

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            N +C +       VTI GYE +P++                       AFQ Y  G+F 
Sbjct: 192 TNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFT 251

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  ++H V  VGYG ++G  YW+V+NSWGT WGE GYIRM RN  S + G CGI ++
Sbjct: 252 GKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKS-GKCGIAIE 310

Query: 333 ASYPVK 338
           ASYPVK
Sbjct: 311 ASYPVK 316


>gi|224083362|ref|XP_002306996.1| predicted protein [Populus trichocarpa]
 gi|222856445|gb|EEE93992.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  267 bits (682), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 191/320 (59%), Gaps = 35/320 (10%)

Query: 53  YDPQSMEER------FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLT 106
           Y P+ +  R      FE+W+ ++ + Y S +E   RF I+  N+ +ID  N + +++ L 
Sbjct: 18  YAPEDLTSRDRIIDLFESWISKHQKIYESIEEKWHRFEIFKDNLFHIDETNKKVVNYWLG 77

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQG 161
            N+FADLS+EEF + YLG N   +  R  S ++       +P SVDWRK+GAVT VK+QG
Sbjct: 78  LNEFADLSHEEFKNKYLGLNVDLSNRRECSEEFTYKDVSSIPKSVDWRKKGAVTDVKNQG 137

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCWAFS VAAVEGIN++ TG L SLSEQELVDCD  + N GCNGG M+ AF +I   
Sbjct: 138 SCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT-TYNNGCNGGLMDYAFAYIISN 196

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA------------------- 262
           GG+  E+DYPY  +   C+  K +   VTI+GY  +P                       
Sbjct: 197 GGLHKEEDYPYIMEEGTCEMRKAESEVVTISGYHDVPQNSEESLLKALANQPLSVAIDAS 256

Query: 263 ---FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
              FQ YS GVFD +CG +L+HGV  VGYG   G  + +VKNSWG+ WGE G+IRM RN+
Sbjct: 257 GRDFQFYSGGVFDGHCGTELDHGVAAVGYGSAKGLDFIVVKNSWGSKWGEKGFIRMKRNT 316

Query: 320 PSSNIGICGILMQASYPVKR 339
                G+CGI   ASYP K+
Sbjct: 317 GKP-AGLCGINKMASYPTKK 335


>gi|242074728|ref|XP_002447300.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
 gi|241938483|gb|EES11628.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
          Length = 471

 Score =  267 bits (682), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 140/310 (45%), Positives = 182/310 (58%), Gaps = 34/310 (10%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNLS--FKLTDNKFADLSNEEF 118
           +E W+ ++ +   +   E  RRF  +  N++++D  N++  +  ++L  N+FADL+N EF
Sbjct: 52  YEQWMARHGKAASNALGEHDRRFRAFWDNLRFVDAHNARAGARGYRLGINRFADLTNAEF 111

Query: 119 ISTYL------GYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
            + YL      G        R+       LP  VDWR++GAV PVK+QGQCGSCWAFSAV
Sbjct: 112 RAAYLSAGARNGTATAATGERYRHDGVEALPEFVDWRQKGAVAPVKNQGQCGSCWAFSAV 171

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVEGIN++ TG+LV+LSEQELVDC  N +N GC+GG M+ AF FI   GG+ T+ DYPY
Sbjct: 172 GAVEGINQIVTGELVTLSEQELVDCSKNGQNGGCDGGMMDDAFAFIVGNGGIDTDKDYPY 231

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGV 270
             ++ +C   K   H V+I G+E +P                          FQLY  GV
Sbjct: 232 TARDGKCDVAKRSRHVVSIDGFEGVPRNDEKSLQKAVAHQPVAVAIEAGGREFQLYQSGV 291

Query: 271 FDEYCGHQLNHGVTVVGYG--EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           F   CG  L+HGV  VGYG   D G  YWLV+NSWG  WGE GYIRM RN   +  G CG
Sbjct: 292 FTGRCGTSLDHGVVAVGYGTEADGGRDYWLVRNSWGADWGEGGYIRMERNV-GARAGKCG 350

Query: 329 ILMQASYPVK 338
           I M+ASYPVK
Sbjct: 351 IAMEASYPVK 360


>gi|125564712|gb|EAZ10092.1| hypothetical protein OsI_32402 [Oryza sativa Indica Group]
          Length = 382

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 193/337 (57%), Gaps = 58/337 (17%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           +M E F+ W  +Y+R Y + +E +RR  +Y+ NV+YI+  N+   L+++L +  + DL+N
Sbjct: 47  TMMEMFQRWKAEYNRSYATPEEERRRLRVYARNVRYIEATNAAAGLAYELGETAYTDLTN 106

Query: 116 EEFISTYLG---------------------YNKPYNEPRWPSVQY---LGLPASVDWRKE 151
           +EF++ Y                          P +E + P V +    G PASVDWR  
Sbjct: 107 DEFMAMYTAPPLRSAADDDDDAATTTIITTRAGPVDEHQQPEVYFNESAGAPASVDWRAS 166

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAVT VKDQG+CGSCWAFS VA VEGI K+K GKLVSLSEQELVDCD  + + GC+GG  
Sbjct: 167 GAVTEVKDQGRCGSCWAFSTVAVVEGIQKIKKGKLVSLSEQELVDCD--TLDSGCDGGVS 224

Query: 212 EKAFEFITKIGGVTTEDDYPYRG-KNDRCQTDKTKHHAVTITGYEAIPARYA-------- 262
            +A E+IT  GG+TT DDYPY G     C   K  HHA TI G   +  R          
Sbjct: 225 YRALEWITANGGITTRDDYPYTGAAAAACDRAKLGHHAATIAGLRRVATRSEASLQNAAA 284

Query: 263 --------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH--------GEKYWLVK 300
                         FQ Y  GV+D  CG +LNHGVTVVGYG++         G+KYW++K
Sbjct: 285 AQPVAVSIEAGGDNFQHYRKGVYDGPCGTRLNHGVTVVGYGQEEAPVDGSAAGDKYWIIK 344

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWG +WG+ GYI+M ++      G+CGI ++ S+P+
Sbjct: 345 NSWGKNWGDQGYIKMKKDVAGKPEGLCGIAIRPSFPL 381


>gi|350538043|ref|NP_001234324.1| cysteine protease TDI-65 precursor [Solanum lycopersicum]
 gi|5726641|gb|AAD48496.1|AF172856_1 cysteine protease TDI-65 [Solanum lycopersicum]
 gi|2828252|emb|CAA05894.1| CYP1 [Solanum lycopersicum]
          Length = 466

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 202/348 (58%), Gaps = 40/348 (11%)

Query: 29  VLSLFLLWVLGIPAGA-------WSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
            +S+ L+ +    + A       + E +  +     +   +E+WL ++ + Y +  E  +
Sbjct: 9   TISILLMLIFSTLSSASDMSIISYDETHIHRRTDDEVSALYESWLIEHGKSYNALGEKDK 68

Query: 82  RFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP---SV 137
           RF I+  N++YID  NS  N S+KL   KFADL+NEE+ S YLG     +  +     S 
Sbjct: 69  RFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRKKLSKNKSD 128

Query: 138 QYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           +YL      LP S+DWR++G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQ
Sbjct: 129 RYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQ 188

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCD  S N+GC+GG M+ AFEF+ K GG+ TE+DYPY+ +N  C   +     V I 
Sbjct: 189 ELVDCD-RSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKID 247

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
            YE +P                          FQ Y  G+F   CG  ++HGV + GYG 
Sbjct: 248 SYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGT 307

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           ++G  YW+V+NSWG +WGE GY+R+ RN  SS+ G+CG+ ++ SYPVK
Sbjct: 308 ENGMDYWIVRNSWGANWGENGYLRVQRNVASSS-GLCGLAIEPSYPVK 354


>gi|115461667|ref|NP_001054433.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|14719319|gb|AAK73137.1|AC079022_10 putative cysteine proteinase [Oryza sativa]
 gi|33151125|gb|AAP97431.1| cysteine protease CP1 [Oryza sativa]
 gi|52353572|gb|AAU44138.1| cysteine proteinase CP1 [Oryza sativa Japonica Group]
 gi|113577984|dbj|BAF16347.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|125550541|gb|EAY96250.1| hypothetical protein OsI_18148 [Oryza sativa Indica Group]
          Length = 358

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 182/311 (58%), Gaps = 35/311 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E FE W+ +Y + Y S +E  RRF ++  N+ +ID IN +  S+ L  N+FADL+++EF 
Sbjct: 49  ELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFK 108

Query: 120 STYLGYNKP----------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           +TYLG   P            E R+  +    +P  +DWRK+ AVT VK+QGQCGSCWAF
Sbjct: 109 ATYLGLTPPPTRSNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQGQCGSCWAF 168

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S VAAVEGIN + TG L SLSEQEL+DC  +  N GCNGG M+ AF +I   GG+ TE+ 
Sbjct: 169 STVAAVEGINAIVTGNLTSLSEQELIDCSTDG-NNGCNGGLMDYAFSYIASTGGLRTEEA 227

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYS 267
           YPY  +   C   K     VTI+GYE +PA                         FQ YS
Sbjct: 228 YPYAMEEGDCDEGKGA-AVVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYS 286

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
            GVFD  CG QL+HGVT VGYG   G+ Y +VKNSWG  WGE GYIRM R +     G+C
Sbjct: 287 GGVFDGPCGEQLDHGVTAVGYGTSKGQDYIIVKNSWGPHWGEKGYIRMKRGTGKGE-GLC 345

Query: 328 GILMQASYPVK 338
           GI   ASYP K
Sbjct: 346 GINKMASYPTK 356


>gi|3688528|emb|CAA06243.1| pre-pro-TPE4A protein [Pisum sativum]
          Length = 360

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 147/316 (46%), Positives = 190/316 (60%), Gaps = 36/316 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W   ++    S DE   RF ++ +NV ++   N  +  +KL  NKFAD++N
Sbjct: 34  KSLWDLYERWRSHHTVTR-SLDEKHNRFNVFKANVMHVHNTNKLDKPYKLKLNKFADMTN 92

Query: 116 EEFISTY----LGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF   Y    + +++ +      +  ++      +P+S+DWRK+GAVT VKDQGQCGSC
Sbjct: 93  YEFRRIYADSKVSHHRMFRGMSNENGTFMYENVKNVPSSIDWRKKGAVTDVKDQGQCGSC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS + AVEGIN++KT KLVSLSEQELVDCD    N+GCNGG ME AFEFI K  G+TT
Sbjct: 153 WAFSTIVAVEGINQIKTQKLVSLSEQELVDCDTGG-NEGCNGGLMEYAFEFI-KQNGITT 210

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E +YPY  K+  C   K     V+I GYE +P                        Y FQ
Sbjct: 211 ESNYPYAAKDGTCDLKKEDKAEVSIDGYENVPINNEAALLKAAAKQPVSVAIDAGGYNFQ 270

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGE-KYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF  +CG  LNHGV VVGYG      KYW+VKNSWG+ WGE GYIRM R   S  
Sbjct: 271 FYSEGVFSGHCGTDLNHGVAVVGYGVTQDRTKYWIVKNSWGSEWGEQGYIRMQR-GISHK 329

Query: 324 IGICGILMQASYPVKR 339
            G+CGI M+ASYP+K+
Sbjct: 330 EGLCGIAMEASYPIKK 345


>gi|359359120|gb|AEV41026.1| putative cysteine protease [Oryza minuta]
          Length = 464

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 190/315 (60%), Gaps = 39/315 (12%)

Query: 62  FENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLS 114
           ++ W+ ++    GS +    E++RRF ++  N++++D  N+   ++  F+L  N+FADL+
Sbjct: 66  YDLWVARHRHGGGSHNGFVGEYERRFRVFWDNLKFVDAHNAHADEHGGFRLGMNRFADLT 125

Query: 115 NEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAV-TPVKDQGQCGSCWA 168
           N+EF + YLG   P    R     Y       LP SVDWR +GAV +PVK+QGQCGSCWA
Sbjct: 126 NDEFRAAYLG-TTPAGRGRHVGEMYRHDGVEALPDSVDWRDKGAVVSPVKNQGQCGSCWA 184

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAAVEGINK+ TG+LVSLSEQELV+C  N  N GCNGG M+ AF FIT+ GG+ TE+
Sbjct: 185 FSAVAAVEGINKIVTGELVSLSEQELVECARNRGNSGCNGGIMDDAFAFITRNGGLDTEE 244

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY   + +C   K     V+I G+E +P                          FQLY
Sbjct: 245 DYPYTAMDGKCDLAKKSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLY 304

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
             GVF   CG  L+HGV  VGYG D   G  YW V+NSWG  WGE GYIRM RN  ++  
Sbjct: 305 DSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWGPDWGENGYIRMERNV-TART 363

Query: 325 GICGILMQASYPVKR 339
           G CGI M ASYP+K+
Sbjct: 364 GKCGIAMMASYPIKK 378


>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa]
 gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 152/348 (43%), Positives = 202/348 (58%), Gaps = 36/348 (10%)

Query: 24  MLRNAVLSLFL-LWVLGIPAGAWS-EGYPQKY--DPQSMEERFENWLKQYSREYGSEDEW 79
           +L+ + L+ F  L+V  + A  +S  GY  ++      + E FE+W+  + + Y S +E 
Sbjct: 5   VLKTSFLTFFASLFVCSVLAHDFSIVGYSPEHLTSVDKLVELFESWISGHGKAYNSLEEK 64

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ- 138
             RF ++  N+++ID  N +  S+ L  N+FADLS+EEF S +LG    +  PR  S + 
Sbjct: 65  LHRFEVFKENLKHIDQRNKEVTSYWLGLNEFADLSHEEFKSKFLGLYPEF--PRKKSSED 122

Query: 139 -----YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
                 + LP S+DWRK+GAVTPVK+QG CGSCWAFS VAAVEGIN++  G L SLSEQ+
Sbjct: 123 FSYRDVVDLPKSIDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVAGNLTSLSEQQ 182

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           L+DCD  S N GCNGG M+ AFEFI   GG+  E+DYPY  +   C   + +   VTI+G
Sbjct: 183 LIDCDT-SFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYLMEEGTCDEKREEMEVVTISG 241

Query: 254 YEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           Y  +P                      +   FQ YS GVF   CG  L+HGV  VGYG  
Sbjct: 242 YHDVPRNDEQSLLKALAHQPLSVAIDASGRDFQFYSGGVFSGPCGTDLDHGVAAVGYGSS 301

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
            G  Y +VKNSWG  WGE GY+RM RN+     G+CGI   ASYP K+
Sbjct: 302 SGIDYIIVKNSWGPKWGERGYLRMKRNTGKPE-GLCGINKMASYPTKQ 348


>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas]
          Length = 441

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 144/308 (46%), Positives = 186/308 (60%), Gaps = 34/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           FE W +Q+ + Y S++E   R  ++  N  ++   NSQ N S+ L+ N FADL++ EF +
Sbjct: 30  FETWCQQHGKTYASQEEKLFRLKVFQDNYDFVTEHNSQGNSSYTLSLNAFADLTHHEFKA 89

Query: 121 TYLGY--------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           + LG         N   +  + P      +PASVDWRK GAVT VKDQG CG+CW+FSA 
Sbjct: 90  SRLGLSSAASASLNVDRSNRQIPDF-VADVPASVDWRKNGAVTQVKDQGNCGACWSFSAT 148

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            A+EGINK+ TG LVSLSEQELVDCD  S N GC GG M+ AF+F+    G+ TE+DYPY
Sbjct: 149 GAIEGINKIVTGSLVSLSEQELVDCD-KSYNNGCEGGIMDYAFQFVIDNHGIDTEEDYPY 207

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGV 270
           +G++  C  +K K H VTI GY  +P                      +  AFQLYS G+
Sbjct: 208 QGRDRSCNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQPVSVGICGSERAFQLYSKGI 267

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F   C   L+H V +VGYG ++G  YW+VKNSWG+ WG  GY+ M RNS SS  G+CGI 
Sbjct: 268 FTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGSYWGMDGYMHMQRNSGSSR-GLCGIN 326

Query: 331 MQASYPVK 338
           M ASYP K
Sbjct: 327 MLASYPKK 334


>gi|359359168|gb|AEV41073.1| putative cysteine protease [Oryza minuta]
          Length = 499

 Score =  266 bits (681), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 188/315 (59%), Gaps = 39/315 (12%)

Query: 62  FENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLS 114
           ++ W+ ++    GS +    E++RRF ++  N++++D  N+   ++  F+L  N+FADL+
Sbjct: 65  YDLWVARHRHGGGSHNGLVGEYERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLT 124

Query: 115 NEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAV-TPVKDQGQCGSCWA 168
           N+EF + YLG   P    R     Y       LP SVDWR +GAV  PVK+QGQCGSCWA
Sbjct: 125 NDEFRAAYLG-TTPAGRGRHVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWA 183

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAAVEGINK+ TG+LVSLSEQELV+C  N  N GCNGG M+ AF FI + GG+ TE+
Sbjct: 184 FSAVAAVEGINKIVTGELVSLSEQELVECARNGANSGCNGGMMDDAFAFIARNGGLDTEE 243

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY   + +C   K     V+I G+E +P                          FQLY
Sbjct: 244 DYPYTAMDGKCNLAKKSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLY 303

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
             GVF   CG  L+HGV  VGYG D   G  YW V+NSWG  WGE GYIRM RN  ++  
Sbjct: 304 DSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWGPDWGENGYIRMERNV-TART 362

Query: 325 GICGILMQASYPVKR 339
           G CGI M ASYP+K+
Sbjct: 363 GKCGIAMMASYPIKK 377


>gi|14600257|gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
          Length = 437

 Score =  266 bits (681), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 195/314 (62%), Gaps = 40/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNE 116
           + E F++W +++ + YGSE+E Q+R  I+  N  ++   N   N ++ L+ N FADL++ 
Sbjct: 28  ISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHH 87

Query: 117 EFISTYLGYNKPYNEPRWPSV------QYLG----LPASVDWRKEGAVTPVKDQGQCGSC 166
           EF ++ LG +        PSV      Q LG    +P SVDWRK+GAVT VKDQG CG+C
Sbjct: 88  EFKASRLGLSVSA-----PSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGAC 142

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FSA  A+EGIN++ TG L+SLSEQEL+DCD  S N GCNGG M+ AFEF+ K  G+ T
Sbjct: 143 WSFSATGAMEGINQIVTGDLISLSEQELIDCD-KSYNAGCNGGLMDYAFEFVIKNHGIDT 201

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGY------------EAIPAR----------YAFQ 264
           E DYPY+ ++  C+ DK K   VTI  Y            EA+ A+           AFQ
Sbjct: 202 EKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQ 261

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LYS G+F   C   L+H V +VGYG  +G  YW+VKNSWG SWG  G++ M RN+ +S+ 
Sbjct: 262 LYSRGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTENSD- 320

Query: 325 GICGILMQASYPVK 338
           G+CGI M ASYP+K
Sbjct: 321 GVCGINMLASYPIK 334


>gi|4731374|gb|AAD28477.1|AF133839_1 papain-like cysteine protease [Sandersonia aurantiaca]
          Length = 357

 Score =  266 bits (680), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 208/351 (59%), Gaps = 49/351 (13%)

Query: 29  VLSLF-LLWVLGIPAGAWSEGYPQKYDPQSMEER---FENWLKQY--SREYGSEDEWQRR 82
           + SLF +L VL +  G+      ++ D +S +     +E W   +  SR+    D+ Q+R
Sbjct: 1   MASLFPVLLVLALAFGSTLSIPIKEKDLESEDSLWSLYERWRSHHAVSRDL---DQKQKR 57

Query: 83  FGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG 141
           F ++  NV++I   N +++++FKL  NKF D++N+EF + Y G    ++     S    G
Sbjct: 58  FNVFKENVKFIHEFNKNKDVTFKLALNKFGDMTNQEFRAKYAGSKVHHHRTMKGSRHGSG 117

Query: 142 -----------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
                       P S+DWR+ GAV  VK+QGQCGSCWAFSA+AAVEGIN++ T +LV LS
Sbjct: 118 SGAKFMYENAVAPPSIDWRERGAVAAVKNQGQCGSCWAFSAIAAVEGINQIVTKELVPLS 177

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQEL+DCD + +NQGC+GG M+ AFEFI   GG+TTED YPY+ ++  C   K    AV 
Sbjct: 178 EQELIDCDTD-QNQGCSGGLMDYAFEFIKNNGGITTEDVYPYQAEDATC---KKNSPAVV 233

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I GYE +P                        Y FQ YS GVF   CG +L+HGV VVGY
Sbjct: 234 IDGYEDVPTNDEDALMKAVANQPVAVAIEASGYVFQFYSEGVFTGRCGTELDHGVAVVGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G    G KYW V+NSWG  WGE+GY+RM R   +++ G+CGI MQASYP+K
Sbjct: 294 GTTQDGTKYWTVRNSWGADWGESGYVRMQRGIKATH-GLCGIAMQASYPIK 343


>gi|37780039|gb|AAP32192.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/349 (43%), Positives = 202/349 (57%), Gaps = 36/349 (10%)

Query: 22  RMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDE 78
           + ++    L LFL    G        GY  + D +SM+   E FE+W+ ++ + Y + +E
Sbjct: 7   KTLVLTCSLCLFLSLAFGRDFSIV--GYSSE-DLKSMDKLIELFESWMSRHGKIYETIEE 63

Query: 79  WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
              RF ++  N+++ID  N    ++ L  N+FADLS++EF + YLG     ++ R  S +
Sbjct: 64  KLLRFEVFKDNLKHIDDRNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRESSNE 123

Query: 139 Y------LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
                  + LP SVDWRK+GAVTPVK+QGQCGSCWAFS VAAVEGIN++ TG L SLSEQ
Sbjct: 124 EEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 183

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           EL+DCD  + N GCNGG M+ AF FI + GG+  E+DYPY  +   C+  K +   VTI 
Sbjct: 184 ELIDCDT-TYNNGCNGGLMDYAFSFIGQNGGLHKEEDYPYIMEESTCEMKKEETQVVTIN 242

Query: 253 GYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GY  +P                      +   FQ YS GVFD +CG  L+HGV+ VGYG 
Sbjct: 243 GYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGT 302

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
                Y +VKNSWG  WGE G+IRM R+      GICG+   ASYP K+
Sbjct: 303 SKNLDYIIVKNSWGAKWGEKGFIRMKRDIGKPE-GICGLYKMASYPTKK 350


>gi|18391078|ref|NP_563855.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
 gi|110741821|dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
 gi|111074448|gb|ABH04597.1| At1g09850 [Arabidopsis thaliana]
 gi|332190386|gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
          Length = 437

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 195/314 (62%), Gaps = 40/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNE 116
           + E F++W +++ + YGSE+E Q+R  I+  N  ++   N   N ++ L+ N FADL++ 
Sbjct: 28  ISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHH 87

Query: 117 EFISTYLGYNKPYNEPRWPSV------QYLG----LPASVDWRKEGAVTPVKDQGQCGSC 166
           EF ++ LG +        PSV      Q LG    +P SVDWRK+GAVT VKDQG CG+C
Sbjct: 88  EFKASRLGLSVSA-----PSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGAC 142

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FSA  A+EGIN++ TG L+SLSEQEL+DCD  S N GCNGG M+ AFEF+ K  G+ T
Sbjct: 143 WSFSATGAMEGINQIVTGDLISLSEQELIDCD-KSYNAGCNGGLMDYAFEFVIKNHGIDT 201

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGY------------EAIPAR----------YAFQ 264
           E DYPY+ ++  C+ DK K   VTI  Y            EA+ A+           AFQ
Sbjct: 202 EKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQ 261

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LYS G+F   C   L+H V +VGYG  +G  YW+VKNSWG SWG  G++ M RN+ +S+ 
Sbjct: 262 LYSSGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTENSD- 320

Query: 325 GICGILMQASYPVK 338
           G+CGI M ASYP+K
Sbjct: 321 GVCGINMLASYPIK 334


>gi|1514953|dbj|BAA11170.1| cysteine proteinase [Oryza sativa (japonica cultivar-group)]
          Length = 368

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 191/317 (60%), Gaps = 40/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +++ + +E W + +   R +G   E  RRFG +  NV+YI   N +   +    N+F D+
Sbjct: 40  EALWDLYERWQEHHHVPRHHG---EKHRRFGAFKDNVRYIHEHNKRAPGYAPL-NRFGDM 95

Query: 114 SNEEFISTYLGYN------KPYNEPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCG 164
             EEF +T+ G +           P  P   Y G   LP +VDWR++GAVT VKDQG+CG
Sbjct: 96  GREEFRATFAGSHANDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCG 155

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V +VEGIN ++TG+LVSLSEQEL+DCD  ++N GC GG ME AFE+I   GG+
Sbjct: 156 SCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDT-ADNSGCQGGLMENAFEYIKHSGGI 214

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPYR  N  C   + +   V I G++ +PA                        +
Sbjct: 215 TTESAYPYRAANGTCDAVRARGGLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQS 274

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   CG  L+HGV VVGYGE + G +YW+VKNSWGT+WGE GYIRM R+S  
Sbjct: 275 FQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDS-G 333

Query: 322 SNIGICGILMQASYPVK 338
            + G+CGI M+ASYPVK
Sbjct: 334 YDGGLCGIAMEASYPVK 350


>gi|4426617|gb|AAD20453.1| cysteine endopeptidase precursor [Oryza sativa]
          Length = 368

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 191/317 (60%), Gaps = 40/317 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +++ + +E W + +   R +G   E  RRFG +  NV+YI   N +   +    N+F D+
Sbjct: 40  EALWDLYERWQEHHHVPRHHG---EKHRRFGAFKDNVRYIHEHNKRAPGYPPL-NRFGDM 95

Query: 114 SNEEFISTYLGYN------KPYNEPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCG 164
             EEF +T+ G +           P  P   Y G   LP +VDWR++GAVT VKDQG+CG
Sbjct: 96  GREEFRATFAGSHANDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCG 155

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS V +VEGIN ++TG+LVSLSEQEL+DCD  ++N GC GG ME AFE+I   GG+
Sbjct: 156 SCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDT-ADNSGCQGGLMENAFEYIKHSGGI 214

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPYR  N  C   + +   V I G++ +PA                        +
Sbjct: 215 TTESAYPYRAANGTCDAVRARGGLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQS 274

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   CG  L+HGV VVGYGE + G +YW+VKNSWGT+WGE GYIRM R+S  
Sbjct: 275 FQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDS-G 333

Query: 322 SNIGICGILMQASYPVK 338
            + G+CGI M+ASYPVK
Sbjct: 334 YDGGLCGIAMEASYPVK 350


>gi|115441717|ref|NP_001045138.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|5761329|dbj|BAA83473.1| cysteine endopeptidase [Oryza sativa]
 gi|20804884|dbj|BAB92565.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|56785107|dbj|BAD82745.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113534669|dbj|BAF07052.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|119395242|gb|ABL74582.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|125528777|gb|EAY76891.1| hypothetical protein OsI_04850 [Oryza sativa Indica Group]
 gi|125573036|gb|EAZ14551.1| hypothetical protein OsJ_04473 [Oryza sativa Japonica Group]
          Length = 371

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/319 (46%), Positives = 193/319 (60%), Gaps = 41/319 (12%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFAD 112
           +++ + +E W + +   R +G   E  RRFG +  NV+YI   N +    ++L  N+F D
Sbjct: 40  EALWDLYERWQEHHHVPRHHG---EKHRRFGAFKDNVRYIHEHNKRGGRGYRLRLNRFGD 96

Query: 113 LSNEEFISTYLGYN------KPYNEPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQC 163
           +  EEF +T+ G +           P  P   Y G   LP +VDWR++GAVT VKDQG+C
Sbjct: 97  MGREEFRATFAGSHANDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKC 156

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS V +VEGIN ++TG+LVSLSEQEL+DCD  ++N GC GG ME AFE+I   GG
Sbjct: 157 GSCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDT-ADNSGCQGGLMENAFEYIKHSGG 215

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHA-VTITGYEAIPAR---------------------- 260
           +TTE  YPYR  N  C   + +    V I G++ +PA                       
Sbjct: 216 ITTESAYPYRAANGTCDAVRARRAPLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGD 275

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
            +FQ YS GVF   CG  L+HGV VVGYGE + G +YW+VKNSWGT+WGE GYIRM R+S
Sbjct: 276 QSFQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDS 335

Query: 320 PSSNIGICGILMQASYPVK 338
              + G+CGI M+ASYPVK
Sbjct: 336 -GYDGGLCGIAMEASYPVK 353


>gi|30141025|dbj|BAC75926.1| cysteine protease-4 [Helianthus annuus]
          Length = 352

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/354 (41%), Positives = 204/354 (57%), Gaps = 38/354 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYP-QKYDPQSME------ERFENWLKQYSREY 73
           M  +  +   SLFL++V  +   A +  +    Y P+ +         FE+WL ++S+ Y
Sbjct: 1   MAFIFSSKKTSLFLVFVSVLACSALANEFSILGYAPEDLTSIHKVIHLFESWLAKHSKIY 60

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
            S DE   RF I+  N+++ID  N +  ++ L  N+FADL++EEF + +LG      E +
Sbjct: 61  ESLDEKLHRFEIFMDNLKHIDDTNKKVSNYWLGLNEFADLTHEEFKNKFLGLKGELPERK 120

Query: 134 WPSVQ------YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             S++      ++ LP SVDWRK+GAV PVK+QGQCGSCWAFS VAAVEGIN++ TG L 
Sbjct: 121 DESIEEFSYRDFVDLPKSVDWRKKGAVAPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLT 180

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
            LSEQEL+DCD  + N GCNGG M+ AF ++ +  G+  E++YPY      C   K    
Sbjct: 181 MLSEQELIDCDT-TFNNGCNGGLMDYAFAYVMR-SGLHKEEEYPYIMSEGTCDEKKDVSE 238

Query: 248 AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTV 285
            VTI+GY  +P                      +   FQ YS GVFD +CG +L+HGV  
Sbjct: 239 TVTISGYHDVPRNNEDSFLKALANQPISVAIEASGRDFQFYSGGVFDGHCGTELDHGVAA 298

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG   G  Y +V+NSWG  WGE GYIRM R +   + G+CG+ M ASYP K+
Sbjct: 299 VGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRKTGKPH-GMCGLYMMASYPTKQ 351


>gi|356542631|ref|XP_003539770.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 194/339 (57%), Gaps = 38/339 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A+L LF  W              +  +  SM ER E W+ Q+ + Y    E + R+ I+ 
Sbjct: 13  ALLLLFGFWAF--------SANTRTLEDASMHERHEQWMAQHGKVYKDHHEKELRYKIFQ 64

Query: 88  SNVQYID-YINSQNLSFKLTDNKFADLSNEEF--ISTYLGY--NKPYNEPRWPSVQYLGL 142
            NV+ I+ + N+ N S KL  N+FADL+ EEF  I+   GY  +K      +       +
Sbjct: 65  QNVKGIEGFNNAGNKSHKLGVNQFADLTEEEFKAINKLKGYMWSKISRTSTFKYEHVTKV 124

Query: 143 PASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           PA++DWR++GAVTP+K QG +CGSCWAF+AVAA EGI KL TG+L+SLSEQEL+DCD N 
Sbjct: 125 PATLDWRQKGAVTPIKSQGLKCGSCWAFAAVAATEGITKLTTGELISLSEQELIDCDTNG 184

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
           +N GC  G +++AF+FI +  G+ TE  YPY+  +  C       H  +I GYE +PA  
Sbjct: 185 DNGGCKWGIIQEAFKFIVQNKGLATEASYPYQAVDGTCNAKVESKHVASIKGYEDVPANN 244

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWL 298
                                Y F+ YS GV    CG   +H VTVVGYG  D G KYWL
Sbjct: 245 ETALLNAVANQPVSVLVDSSDYDFRFYSSGVLSGSCGTTFDHAVTVVGYGVSDDGTKYWL 304

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +KNSWG  WGE GYIR+ R+  +   G+CGI MQASYP+
Sbjct: 305 IKNSWGVYWGEQGYIRIKRDVAAKE-GMCGIAMQASYPI 342


>gi|242055323|ref|XP_002456807.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
 gi|241928782|gb|EES01927.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
          Length = 369

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/296 (48%), Positives = 177/296 (59%), Gaps = 39/296 (13%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTY-------LGYNKPY 129
           E  RRFG +  NV++I   N + +  ++L+ N+F D+  EEF ST+       L   +  
Sbjct: 57  EKGRRFGTFKENVRFIHAHNKRGDRPYRLSLNRFGDMGREEFRSTFADSRINDLRRAESP 116

Query: 130 NEPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
             P  P   Y G   LP SVDWRKEGAVT VKDQG CGSCWAFS V +VEGIN ++TG L
Sbjct: 117 AAPAVPGFMYDGVTDLPPSVDWRKEGAVTAVKDQGHCGSCWAFSTVVSVEGINAIRTGSL 176

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
           VSLSEQEL+DCD  ++  GC GG ME AFEFI   GGVTTE  YPYR  N  C + +++ 
Sbjct: 177 VSLSEQELIDCD--TDENGCQGGLMENAFEFIKSYGGVTTESAYPYRASNGTCDSVRSRR 234

Query: 247 -HAVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGV 283
              V+I G++ +P                         AFQ YS GVF   CG  L+HGV
Sbjct: 235 GQIVSIDGHQMVPTGSEDALAKAVANQPVSVAIDAGGQAFQFYSEGVFTGDCGTDLDHGV 294

Query: 284 TVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
             VGYG  D G  YW+VKNSWG SWGE GYIRM R   + N G+CGI M+AS+P+K
Sbjct: 295 AAVGYGVSDDGTAYWIVKNSWGPSWGEGGYIRMQRG--AGNGGLCGIAMEASFPIK 348


>gi|1169186|sp|P43156.1|CYSP_HEMSP RecName: Full=Thiol protease SEN102; Flags: Precursor
 gi|396568|emb|CAA52425.1| thiol-protease [Hemerocallis hybrid cultivar]
          Length = 360

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/296 (48%), Positives = 184/296 (62%), Gaps = 37/296 (12%)

Query: 77  DEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP 135
           DE  RRF ++  NV++I   N  ++  +KL  NKF D++N+EF S Y G    ++  +  
Sbjct: 54  DEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRG 113

Query: 136 SVQYLG---------LPA-SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK 185
             +  G         LPA S+DWR +GAVT VKDQGQCGSCWAFS +A+VEGIN++KTG+
Sbjct: 114 IQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGE 173

Query: 186 LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK 245
           LVSLSEQELVDCD  S N+GCNGG M+ AFEFI K  G+TTED YPY  ++  C ++   
Sbjct: 174 LVSLSEQELVDCDT-SYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDGTCASNLLN 231

Query: 246 HHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGV 283
              V+I G++ +PA                       Y FQ YS GVF   CG +L+HGV
Sbjct: 232 SPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGV 291

Query: 284 TVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            +VGYG    G KYW+VKNSWG  WGE+GYIRM R   S   G CGI M+ASYP+K
Sbjct: 292 AIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQR-GISDKRGKCGIAMEASYPIK 346


>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 189/315 (60%), Gaps = 31/315 (9%)

Query: 54  DPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           D +SM+   E FE+W+ ++ + Y S +E   RF I+  N+++ID  N    ++ L  N+F
Sbjct: 37  DLKSMDKLIELFESWISRHGKIYQSIEEKLHRFEIFKDNLKHIDERNKVVSNYWLGLNEF 96

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ADLS++EF + YLG    Y+  R    ++    + LP SVDWRK+GAVT VK+QG CGSC
Sbjct: 97  ADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVTQVKNQGSCGSC 156

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF FI +  G+  
Sbjct: 157 WAFSTVAAVEGINQIVTGNLTSLSEQELIDCD-RTYNNGCNGGLMDYAFSFIVENDGLHK 215

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+DYPY  +   C+  K +   VTI+GY  +P                      +   FQ
Sbjct: 216 EEDYPYIMEEGTCEMAKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQ 275

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            YS GVFD +CG  L+HGV  VGYG   G  Y  VKNSWG+ WGE GYIRM RN      
Sbjct: 276 FYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKPE- 334

Query: 325 GICGILMQASYPVKR 339
           GICGI   ASYP K+
Sbjct: 335 GICGIYKMASYPTKK 349


>gi|18408616|ref|NP_566901.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75313880|sp|Q9STL5.1|CEP3_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP3; Flags:
           Precursor
 gi|4678353|emb|CAB41163.1| cysteine endopeptidase precursor-like protein [Arabidopsis
           thaliana]
 gi|26453052|dbj|BAC43602.1| putative cysteine endopeptidase precursor [Arabidopsis thaliana]
 gi|332644885|gb|AEE78406.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 364

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 188/310 (60%), Gaps = 36/310 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E W   +S    S  E  +RF ++  NV ++   N +N  +KL  N+FAD+++ EF S+
Sbjct: 38  YERWRGHHSVSRASH-EAIKRFNVFRHNVLHVHRTNKKNKPYKLKINRFADITHHEFRSS 96

Query: 122 YLGYNKPYNE----PRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           Y G N  ++     P+  S  ++      +P+SVDWR++GAVT VK+Q  CGSCWAFS V
Sbjct: 97  YAGSNVKHHRMLRGPKRGSGGFMYENVTRVPSSVDWREKGAVTEVKNQQDCGSCWAFSTV 156

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEGINK++T KLVSLSEQELVDCD   ENQGC GG ME AFEFI   GG+ TE+ YPY
Sbjct: 157 AAVEGINKIRTNKLVSLSEQELVDCDT-EENQGCAGGLMEPAFEFIKNNGGIKTEETYPY 215

Query: 233 RGKNDR-CQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHG 269
              + + C+ +      VTI G+E +P                          FQLYS G
Sbjct: 216 DSSDVQFCRANSIGGETVTIDGHEHVPENDEEELLKAVAHQPVSVAIDAGSSDFQLYSEG 275

Query: 270 VFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG QLNHGV +VGYGE  +G KYW+V+NSWG  WGE GY+R+ R   S N G CG
Sbjct: 276 VFIGECGTQLNHGVVIVGYGETKNGTKYWIVRNSWGPEWGEGGYVRIER-GISENEGRCG 334

Query: 329 ILMQASYPVK 338
           I M+ASYP K
Sbjct: 335 IAMEASYPTK 344


>gi|242038089|ref|XP_002466439.1| hypothetical protein SORBIDRAFT_01g007820 [Sorghum bicolor]
 gi|241920293|gb|EER93437.1| hypothetical protein SORBIDRAFT_01g007820 [Sorghum bicolor]
          Length = 353

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 180/313 (57%), Gaps = 35/313 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNE 116
           M  R E W+ ++ R Y  E E  RR  I+ +N ++ID  N     S +L  N+FADL++E
Sbjct: 43  MVSRHEKWMAEHGRTYTDEAEKARRLEIFRANAEFIDSFNDAGKHSHRLATNRFADLTDE 102

Query: 117 EFISTYLGYNKPYNEP---------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           EF +   G+                R+ +        SVDWR  GAVT VKDQG+CG CW
Sbjct: 103 EFRAARTGFRPRPAPAAAAGSGGRFRYENFSLADAAQSVDWRAMGAVTGVKDQGECGCCW 162

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAAVEG+NK++TG+LVSLSEQELVDCDVN E+QGC GG M+ AF+FI + GG+ +E
Sbjct: 163 AFSAVAAVEGLNKIRTGRLVSLSEQELVDCDVNGEDQGCEGGLMDDAFQFIERRGGLASE 222

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
             YPY+G +  C++      A +I G+E +P                        YAF+ 
Sbjct: 223 SGYPYQGDDGSCRSSAAAARAASIRGHEDVPRNNEAALAAAVANQPVSVAINGEDYAFRF 282

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  LNH +T VGYG    G KYWL+KNSWGTSWGE GY+R+ R       
Sbjct: 283 YDSGVLGGECGTDLNHAITAVGYGTAADGSKYWLMKNSWGTSWGEGGYVRIRRGVRGE-- 340

Query: 325 GICGILMQASYPV 337
           G+CG+    SYPV
Sbjct: 341 GVCGLAKLPSYPV 353


>gi|255646767|gb|ACU23856.1| unknown [Glycine max]
          Length = 350

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 189/315 (60%), Gaps = 31/315 (9%)

Query: 54  DPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           D +SM+   E FE+W+ ++ + Y + +E   RF I+  N+++ID  N    ++ L  ++F
Sbjct: 37  DLKSMDKLIELFESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLSEF 96

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ADLS+ EF + YLG    Y+  R    ++    + LP SVDWRK+GAV PVK+QG CGSC
Sbjct: 97  ADLSHREFNNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSC 156

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TG L SLSEQEL+DCD  + N GCNGG M+ AF FI + GG+  
Sbjct: 157 WAFSTVAAVEGINQIVTGNLTSLSEQELIDCD-RTYNNGCNGGLMDYAFSFIVENGGLHK 215

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+DYPY  +   C+  K +   VTI+GY  +P                      +   FQ
Sbjct: 216 EEDYPYIMEEGACEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQ 275

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            YS GVFD +CG  L+HGV  VGYG   G  Y  VKNSWG+ WGE GYIRM RN      
Sbjct: 276 FYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKPE- 334

Query: 325 GICGILMQASYPVKR 339
           GICGI   ASYP K+
Sbjct: 335 GICGIYKMASYPTKK 349


>gi|297816030|ref|XP_002875898.1| hypothetical protein ARALYDRAFT_485194 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321736|gb|EFH52157.1| hypothetical protein ARALYDRAFT_485194 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 363

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 187/310 (60%), Gaps = 36/310 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E W   +S    S  E  +RF ++  NV ++   N +N  +KL  N+FAD+++ EF S+
Sbjct: 37  YERWRDHHSVTRASH-EALKRFNVFRHNVLHVHRTNKKNKPYKLKVNRFADITHHEFRSS 95

Query: 122 YLGYNKPYNE----PRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           Y G N  ++     P+  S  ++      +P+SVDWR++GAVT VK+Q  CGSCWAFS V
Sbjct: 96  YAGSNVKHHRMLRGPKRGSGGFMYENVTRVPSSVDWREKGAVTEVKNQQDCGSCWAFSTV 155

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEGINK++T KLVSLSEQELVDCD   ENQGC GG ME AFEFI   GG+ TE+ YPY
Sbjct: 156 AAVEGINKIRTNKLVSLSEQELVDCDT-EENQGCAGGLMEPAFEFIKNNGGIKTEETYPY 214

Query: 233 RGKNDR-CQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHG 269
              + + C+        VTI G+E +P                          FQLYS G
Sbjct: 215 DSNDVQFCRAKSIDGETVTIDGHEHVPENDEEALLKAVAHQPVSVAIDAGSSDFQLYSEG 274

Query: 270 VFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG QLNHGV +VGYGE  +G KYW+V+NSWG  WGE GY+R+ R   S N G CG
Sbjct: 275 VFIGECGTQLNHGVVIVGYGETKNGTKYWIVRNSWGPEWGEGGYVRIER-GISENEGRCG 333

Query: 329 ILMQASYPVK 338
           I M+ASYP K
Sbjct: 334 IAMEASYPTK 343


>gi|75277440|sp|O23791.1|BROM1_ANACO RecName: Full=Fruit bromelain; AltName: Allergen=Ana c 2; Flags:
           Precursor
 gi|2342496|dbj|BAA21849.1| bromelain [Ananas comosus]
          Length = 351

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 202/345 (58%), Gaps = 38/345 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   ++   L LFL  +   P+ A S   P   DP  M +RFE W+ +Y R Y  +DE  
Sbjct: 1   MASKVQLVFLFLFLCAMWASPSAA-SRDEPN--DP--MMKRFEEWMAEYGRVYKDDDEKM 55

Query: 81  RRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY 139
           RRF I+ +NV++I+  NS+N  S+ L  N+F D++  EF++ Y G + P N  R P V +
Sbjct: 56  RRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSF 115

Query: 140 -----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  +P S+DWR  GAV  VK+Q  CGSCW+F+A+A VEGI K+KTG LVSLSEQE+
Sbjct: 116 DDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEV 175

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           +DC V   + GC GG++ KA++FI    GVTTE++YPY      C  +   + A  ITGY
Sbjct: 176 LDCAV---SYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAY-ITGY 231

Query: 255 E---------------------AIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-H 292
                                  I A   FQ Y+ GVF   CG  LNH +T++GYG+D  
Sbjct: 232 SYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSS 291

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G KYW+V+NSWG+SWGE GY+RMAR   SS+ G+CGI M   +P 
Sbjct: 292 GTKYWIVRNSWGSSWGEGGYVRMARGVSSSS-GVCGIAMAPLFPT 335


>gi|146215980|gb|ABQ10192.1| actinidin Act2a [Actinidia deliciosa]
          Length = 378

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 197/336 (58%), Gaps = 35/336 (10%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           LF   +L + +    E   Q+ + Q M   +E+WL ++ + Y S DE + RF I+  N++
Sbjct: 13  LFFSTLLILSSAIDIENSVQRTNDQVMA-MYESWLVEHGKSYNSLDEKEMRFEIFKENLR 71

Query: 92  YIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWPSVQYL-----GLPA 144
            ID  N+  N S+ L  N+FADL++EE+ STYLG  + P  +    S QY+      LP 
Sbjct: 72  IIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGLKRGPKTDV---SNQYMPKVGDALPD 128

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
            VDWR  GAV  VK+QG C SCWAFSAVAAVEGINK+ TG L+SLSEQELVDC      +
Sbjct: 129 YVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQELVDCGRTQITK 188

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY--- 261
           GCN G M  AF+FI   GG+ TE++YPY  K+ +C         VTI  Y+ +P+     
Sbjct: 189 GCNRGLMTDAFKFIINNGGINTENNYPYTAKDGQCNLSLKNQKYVTIDSYKNVPSNNEMA 248

Query: 262 -------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNS 302
                               F+LY+ G+F   CG  ++HGVT+VGYG + G  YW+VKNS
Sbjct: 249 LKKAVAYQPVSVGVESEGGKFKLYTSGIFTGSCGTAVDHGVTIVGYGTERGMDYWIVKNS 308

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           WGT+WGE+GYIR+ RN   +  G CGI    SYPVK
Sbjct: 309 WGTNWGESGYIRIQRNIGGA--GKCGIAKMPSYPVK 342


>gi|356517310|ref|XP_003527331.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 200/349 (57%), Gaps = 40/349 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           M    +N  L LFL+  +      W S    ++       ER E W+ QY R Y    E 
Sbjct: 1   MNSFSQNHYLILFLVLAV------WTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEK 54

Query: 80  QRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN------EP 132
           ++RF ++ +NV +I+  N+  +  F L+ N+FADL++EEF +  +   K  +      E 
Sbjct: 55  EKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTET 114

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
            +       +PA++D RK GAVTP+KDQG+CGSCWAFSAVAA EGI+++ TGKLV LSEQ
Sbjct: 115 SFRYESVTKIPATIDRRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLSEQ 174

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDC V  E++GC GGY++ AFEFI K GG+ +E  YPY+G N  C+  K  H    I 
Sbjct: 175 ELVDC-VKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAEIK 233

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFD-EYCGHQLNHGVTVVGYG 289
           GYE +P+                       +AF+ YS G+F+   CG   NH V VVGYG
Sbjct: 234 GYEKVPSNNEKALLKAVANQPVSVYIDAGTHAFKYYSSGIFNARNCGTDPNHAVAVVGYG 293

Query: 290 EDHGE-KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +   + KYWLVKNSWGT WGE GYIR+ R+  +   G+CGI     YP+
Sbjct: 294 KALDDSKYWLVKNSWGTEWGERGYIRIKRDIRAKE-GLCGIAKYPYYPI 341


>gi|26452046|dbj|BAC43113.1| putative cysteine proteinase RD21A precursor [Arabidopsis thaliana]
          Length = 362

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 141/307 (45%), Positives = 181/307 (58%), Gaps = 31/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           +E WL +  + Y    E +RRF I+  N++++D  NS  + +F++   +FADL+NEEF +
Sbjct: 44  YEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRA 103

Query: 121 TYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            YL      N+    + +YL      LP  VDWR  GAV  VKDQG CGSCWAFSAV AV
Sbjct: 104 IYLRKKMERNKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAV 163

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG+L+SLSEQELVDCD    N GC+GG M  AFEFI K GG+ T+ DYPY   
Sbjct: 164 EGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 236 N-DRCQTDKTKH-HAVTITGYEAIP----------------------ARYAFQLYSHGVF 271
           +   C  DK  +   VTI GYE +P                      +  AFQLY  GV 
Sbjct: 224 DLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVM 283

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV VVGYG   GE YW+++NSWG +WG++GY+++ RN      G CGI M
Sbjct: 284 TGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP-FGKCGIAM 342

Query: 332 QASYPVK 338
             SYP K
Sbjct: 343 MPSYPTK 349


>gi|146215982|gb|ABQ10193.1| actinidin Act2b [Actinidia eriantha]
          Length = 378

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/340 (43%), Positives = 198/340 (58%), Gaps = 32/340 (9%)

Query: 28  AVLSLFLLW---VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           +V+S+ LL+   +L +      E   Q+ + Q M   +E+WL +  + Y S DE + RF 
Sbjct: 6   SVISMSLLFFSTLLILSLALDIENSVQRTNDQVMA-MYESWLVEQGKSYNSLDEKEMRFE 64

Query: 85  IYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWPSVQYLG- 141
           I+  N++ ID  N+  N S+ L  N+FADL++EE+ STYLG    P  +     +  +G 
Sbjct: 65  IFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGLKMGPKTDVSNEYMPKVGE 124

Query: 142 -LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP  VDWR  GAV  VK+QG C SCWAFSAV AVEGINK+ TG L+SLSEQELVDC   
Sbjct: 125 ALPDYVDWRTVGAVVGVKNQGLCSSCWAFSAVTAVEGINKIVTGNLISLSEQELVDCGRT 184

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR 260
              +GCN G M  AF+FI   GG+ TED+YPY  K+ +C         VTI  Y+ +P+ 
Sbjct: 185 QRTKGCNRGLMTDAFQFIINNGGINTEDNYPYTAKDGQCNLSLKNQKYVTIDNYKNVPSN 244

Query: 261 Y----------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                                   F+LY+ G+F  +CG  ++HGVT+VGYG + G  YW+
Sbjct: 245 NEMALKKAVAYQPVSVGVESEGGKFKLYTSGIFTGFCGTAVDHGVTIVGYGTERGMDYWI 304

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSWGT+WGE GYIR+ RN   +  G CGI    SYPVK
Sbjct: 305 VKNSWGTNWGENGYIRIQRNIGGA--GKCGIARMPSYPVK 342


>gi|226507950|ref|NP_001151278.1| LOC100284911 precursor [Zea mays]
 gi|195645488|gb|ACG42212.1| vignain precursor [Zea mays]
          Length = 376

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 147/314 (46%), Positives = 187/314 (59%), Gaps = 44/314 (14%)

Query: 62  FENWLKQYS--REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E W  +++  R+ G +    RRF ++ +NV+ I   N ++  +KL  N+F D++ +EF 
Sbjct: 49  YERWRGRHALARDLGDK---ARRFNVFKANVRLIHEFNRRDEPYKLRLNRFGDMTADEFR 105

Query: 120 STYLG----YNKPYNEPRWPS--------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
             Y G    +++ +   R  S             +PASVDWR++GAVT VKDQGQCGSCW
Sbjct: 106 RHYAGSRVAHHRMFRGDRQGSSASASFMYADARDVPASVDWRQKGAVTDVKDQGQCGSCW 165

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS +AAVEGIN +KT  L SLSEQ+LVDCD  + N GCNGG M+ AF++I K GGV  E
Sbjct: 166 AFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKA-NAGCNGGLMDYAFQYIAKHGGVAAE 224

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
           D YPYR +   C+  K+    VTI GYE +PA                         FQ 
Sbjct: 225 DAYPYRARQASCK--KSPAPVVTIDGYEDVPANDESALKKAVAHQPVSVAIEASGSHFQF 282

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GVF   CG +L+HGVT VGYG    G KYWLVKNSWG  WGE GYIRMAR+  +   
Sbjct: 283 YSEGVFSGRCGTELDHGVTAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKE- 341

Query: 325 GICGILMQASYPVK 338
           G CGI M+ASYPVK
Sbjct: 342 GHCGIAMEASYPVK 355


>gi|359359118|gb|AEV41024.1| putative oryzain beta chain precursor [Oryza minuta]
          Length = 493

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 141/339 (41%), Positives = 193/339 (56%), Gaps = 64/339 (18%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEF 118
           ++ WL +  R Y +  E +RRF ++  N++++D  N+   ++  F+L  N+FADL+N+EF
Sbjct: 49  YDLWLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLTNDEF 108

Query: 119 ISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQC---------- 163
            +T+LG  K     R    +Y       LP SVDWR++GAV PVK+QGQC          
Sbjct: 109 RATFLGA-KFVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCVDRIIVWNSM 167

Query: 164 ----------------------GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
                                 GSCWAFSAV+ VE IN+L TG++++LSEQELV+C  N 
Sbjct: 168 VRIYVVDAGCMLENPLMGLTVQGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNG 227

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
           +N GCNGG M+ AF+FI K GG+ TEDDYPY+  + +C  ++     V+I G+E +P   
Sbjct: 228 QNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQND 287

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                  FQLY  GVF   CG  L+HGV  VGYG D+G+ YW+V
Sbjct: 288 EKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIV 347

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +NSWG  WGE+GY+RM RN  ++  G CGI M ASYP K
Sbjct: 348 RNSWGPKWGESGYVRMERN-INATTGKCGIAMMASYPTK 385


>gi|5777889|emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  264 bits (674), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 198/349 (56%), Gaps = 42/349 (12%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER--------FENWLKQYSREYGSEDEWQ 80
            +SL L+ +    + A S+     YD   +  R        +E+WL ++ + Y +  E  
Sbjct: 9   TISLLLMLIFSTLSSA-SDMSIISYDETHIHHRSDDEVSALYESWLIEHGKSYNALGEKD 67

Query: 81  RRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP---S 136
           +RF I+  N++YID  NS  N S+KL   KFADL+NEE+ S YLG     +  +     S
Sbjct: 68  KRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRRKLSKNKS 127

Query: 137 VQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSE 191
            +YL      LP SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSE
Sbjct: 128 DRYLPKVGDSLPESVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSE 187

Query: 192 QELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTI 251
           QELVDCD  S N+GC+GG M+ AFEF+   GG+ TE+DYPY+ +ND C   +     V I
Sbjct: 188 QELVDCD-KSYNEGCDGGLMDYAFEFVINNGGIDTEEDYPYKERNDVCDQYRKNAKVVKI 246

Query: 252 TGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
             YE +P                           Q Y  G+F   CG  ++HGV   GYG
Sbjct: 247 DSYEDVPVNNEKALQKAVAHQPVSIAIEAGGRDLQHYKSGIFTGKCGTAVDHGVVAAGYG 306

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            ++G  YW+V+NSWG  WGE GY+R+ RN  SS+ G+CG+  + SYPVK
Sbjct: 307 SENGMDYWIVRNSWGAKWGEKGYLRVQRNVASSS-GLCGLATEPSYPVK 354


>gi|37780049|gb|AAP32197.1| cysteine protease 10 [Trifolium repens]
          Length = 272

 Score =  263 bits (673), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/269 (52%), Positives = 172/269 (63%), Gaps = 29/269 (10%)

Query: 97  NSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--RWPSVQY---LGLPASVDWRKE 151
           N  N  +KL  NKFADL+NEEF ++   +         R  + +Y     +P++VDWRK+
Sbjct: 4   NVNNKLYKLGINKFADLTNEEFKASRNKFKGHMCSSIIRTTTFKYENASAIPSTVDWRKK 63

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAVTPVK+QGQCGSCWAFSAVAA EGI++L TGKLVSLSEQEL+DCD    +QGC GG M
Sbjct: 64  GAVTPVKNQGQCGSCWAFSAVAATEGIHQLSTGKLVSLSEQELIDCDTKGVDQGCEGGLM 123

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA--------- 262
           + AF+FI +  G++TE  YPY G +  C T++   HAVTITGYE +PA            
Sbjct: 124 DDAFKFIIQNHGLSTEVQYPYEGVDGTCNTNEASIHAVTITGYEDVPANNELALQKAVAN 183

Query: 263 -------------FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWG 308
                        FQ Y+ GVF   CG +L+HGVT VGYG  + G KYWLVKNSWG  WG
Sbjct: 184 QPISVAIDASGSDFQFYNSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGADWG 243

Query: 309 EAGYIRMARNSPSSNIGICGILMQASYPV 337
           E GYIRM R   ++  G+CGI MQASYP 
Sbjct: 244 EEGYIRMQRGIDAAE-GLCGIAMQASYPT 271


>gi|359359215|gb|AEV41119.1| putative cysteine protease [Oryza officinalis]
          Length = 499

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 143/295 (48%), Positives = 179/295 (60%), Gaps = 35/295 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW 134
           E++RRF ++  N++++D  N+   ++  F+L  N+FADL+N+EF + YLG   P    R 
Sbjct: 85  EYERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLTNDEFRAAYLG-TTPAGRGRH 143

Query: 135 PSVQYLG-----LPASVDWRKEGAV-TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
               Y       LP SVDWR +GAV  PVK+QGQCGSCWAFSAVAAVEGINK+ TG+LVS
Sbjct: 144 VGEAYRHDGVEVLPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVS 203

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELV+C  N  N GCNGG M+ AF FI + GG+ TE+DYPY   + +C   K     
Sbjct: 204 LSEQELVECARNGANSGCNGGMMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKKSRKV 263

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I G+E +P                          FQLY  GVF   CG  L+HGV  V
Sbjct: 264 VSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTSLDHGVVAV 323

Query: 287 GYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           GYG D   G  YW V+NSWG  WGE GYIRM RN  ++  G CGI M ASYP+K+
Sbjct: 324 GYGTDAATGTDYWTVRNSWGPDWGENGYIRMERNV-TARTGKCGIAMMASYPIKK 377


>gi|22759715|dbj|BAC10906.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/354 (42%), Positives = 200/354 (56%), Gaps = 38/354 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYP-QKYDPQSME------ERFENWLKQYSREY 73
           M  +  +   SL  L+V  +   A +  +    Y P+ +         FE+WL ++S+ Y
Sbjct: 1   MAFIFSSKKTSLLFLFVSILACSALAHEFSILGYAPEDLTSIHKVIHLFESWLVKHSKFY 60

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
            S DE   RF I+  N+++ID  N +  ++ L  N+FADL++EEF   +LG+     E +
Sbjct: 61  ESLDEKLHRFEIFMDNLKHIDETNKKVSNYWLGLNEFADLTHEEFKHKFLGFKGELAERK 120

Query: 134 WPSVQYLG------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             S +  G      LP SVDWRK+GAV PVK+QGQCGSCWAFS VAAVEGIN++ TG L 
Sbjct: 121 DESSKEFGYRDFVDLPKSVDWRKKGAVAPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLT 180

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
            LSEQEL+DCD  + N GCNGG M+ AF ++ +  G+  E++YPY      C   K    
Sbjct: 181 MLSEQELIDCDT-TFNNGCNGGLMDYAFAYVMR-SGLHKEEEYPYIMSEGTCDEKKDVSE 238

Query: 248 AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTV 285
            VTI+GY  +P                      +   FQ YS GVFD +CG +L+HGV  
Sbjct: 239 KVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDFQFYSGGVFDGHCGTELDHGVAA 298

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG   G  Y +V+NSWG  WGE GYIRM R S   + G+CG+ M ASYP K+
Sbjct: 299 VGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRGSGKPH-GMCGLYMMASYPTKQ 351


>gi|414870137|tpg|DAA48694.1| TPA: vignain [Zea mays]
          Length = 484

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 187/315 (59%), Gaps = 45/315 (14%)

Query: 62  FENWLKQYS--REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E W  +++  R+ G +    RRF ++ +NV+ I   N ++  +KL  N+F D++ +EF 
Sbjct: 156 YERWRGRHALARDLGDK---ARRFNVFKANVRLIHEFNRRDEPYKLRLNRFGDMTADEFR 212

Query: 120 STYLG----YNKPYNEPRWPS---------VQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
             Y G    +++ +   R  S              +PASVDWR++GAVT VKDQGQCGSC
Sbjct: 213 RHYAGSRVAHHRMFRGDRQGSSASASSFMYADARDVPASVDWRQKGAVTDVKDQGQCGSC 272

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS +AAVEGIN +KT  L SLSEQ+LVDCD  + N GCNGG M+ AF++I K GGV  
Sbjct: 273 WAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKA-NAGCNGGLMDYAFQYIAKHGGVAA 331

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           ED YPYR +   C+  K+    VTI GYE +PA                         FQ
Sbjct: 332 EDAYPYRARQASCK--KSPAPVVTIDGYEDVPANDESALKKAVAHQPVSVAIEASGSHFQ 389

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG +L+HGV  VGYG    G KYWLVKNSWG  WGE GYIRMAR+  ++ 
Sbjct: 390 FYSEGVFSGRCGTELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDV-AAK 448

Query: 324 IGICGILMQASYPVK 338
            G CGI M+ASYPVK
Sbjct: 449 EGHCGIAMEASYPVK 463


>gi|1174171|gb|AAB41816.1| NTH1 [Pisum sativum]
          Length = 367

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 198/337 (58%), Gaps = 33/337 (9%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           L+ L + G+   + S         + +   +E WL ++ + Y    E  +RF I+  N+ 
Sbjct: 5   LYSLILFGLITLSLSLDMSSGRSNKEVMTMYEKWLVKHQKVYYGLGEKNQRFQIFKDNLI 64

Query: 92  YIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN-EPRWPSVQYL-------GLP 143
           +ID  N+ N S+++  N+F+D++N+E+  TYL      N + +  SV+Y         LP
Sbjct: 65  FIDEHNAPNHSYRVGLNEFSDITNKEYRDTYLSRWSNNNIKNKITSVRYAYKAGHNNKLP 124

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
            SVDWR  GA+TP+K+QG CG+CWAFSAVAAVE INK+ TG LVSLSEQELVDCD  ++N
Sbjct: 125 VSVDWR--GALTPIKNQGSCGACWAFSAVAAVEAINKIVTGSLVSLSEQELVDCD-RTKN 181

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI------ 257
           +GCNGG    A+ FI + GG+ ++ DYPY G+   C   K     V+I GY+ +      
Sbjct: 182 KGCNGGNQVNAYRFIVENGGLDSQIDYPYLGRQSTCNQAKKNTKVVSINGYKNVQRNSES 241

Query: 258 ---------PARYA-------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                    P           FQLY  GVF   CG  L+H V VVGYG ++G+ YWLVKN
Sbjct: 242 ALMEAVANQPVSVGIEAYGKDFQLYQSGVFTGSCGTSLDHAVVVVGYGSENGKDYWLVKN 301

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           SWGT+WGE GY+++ RN  ++N G CGI M A+YP K
Sbjct: 302 SWGTNWGERGYLKIERNLKNTNTGKCGIAMDATYPTK 338


>gi|356515044|ref|XP_003526211.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 337

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/333 (42%), Positives = 187/333 (56%), Gaps = 32/333 (9%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L+LFLL  + I     S+   +K    S+ E  ENW+ +Y + Y    E +  F I+  N
Sbjct: 11  LALFLLLSIEI-----SQVMSRKLHETSLREEHENWIARYGQVYKVAAE-KETFQIFKEN 64

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--QYLGLPASV 146
           V++I+  N+  N  +KL  N FADL+ EEF     G  K +     P        +P ++
Sbjct: 65  VEFIESFNAAANKPYKLGVNLFADLTLEEFKDFRFGLKKTHEFSITPFKYENVTDIPEAL 124

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR++GAVTP+KDQGQCGSCWAFS VAA EGI+++ TG LVSL EQELV CD    +QGC
Sbjct: 125 DWREKGAVTPIKDQGQCGSCWAFSTVAATEGIHQITTGNLVSLXEQELVSCDTKGVDQGC 184

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA---- 262
            GGYME  FEFI K GG+TT+ +YPY+G N  C T         I GYE +P+       
Sbjct: 185 EGGYMEDGFEFIIKNGGITTKANYPYKGVNGTCNTTIAASTVAQIKGYETVPSYSEEALQ 244

Query: 263 ------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWG 304
                             F  Y+ G++   CG  L+HGVT VGYG  +   YW+VKNSWG
Sbjct: 245 KAVANQPVSVSIDANNGHFMFYAGGIYTGECGTDLDHGVTAVGYGTTNETDYWIVKNSWG 304

Query: 305 TSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           T W E G+IRM R     + G+CG+ + +SYP 
Sbjct: 305 TGWDEKGFIRMQRGITVKH-GLCGVALDSSYPT 336


>gi|307110445|gb|EFN58681.1| hypothetical protein CHLNCDRAFT_56822 [Chlorella variabilis]
          Length = 466

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/349 (43%), Positives = 200/349 (57%), Gaps = 38/349 (10%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQR 81
           +R + + L     L + AG   E + + +  Q++E   E F+ W++   R Y S +E++R
Sbjct: 1   MRLSCVLLVACSCLAVAAGFPFENH-RLFIQQAVESPREAFDFWVQTLKRAYASAEEYER 59

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQ 138
           RF ++  N++++   N+ + S  L+   +ADLS +E+ S  LGYN   +E R        
Sbjct: 60  RFDVWLDNLRFVHEYNAGHTSHWLSMGVYADLSQDEYRSKALGYNADLHEERPLRAAPFL 119

Query: 139 YLGL--PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
           Y G   P  VDW  +GAVTPVK+Q  CGSCWAFS   AVEG + + TGKL SLSEQ LVD
Sbjct: 120 YEGTVPPKEVDWVAKGAVTPVKNQLLCGSCWAFSTTGAVEGASAIATGKLASLSEQMLVD 179

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           CD   +N GC+GG M+ AFEFI K GG+ TEDDYPY  +   CQ +K + H VTI  Y+ 
Sbjct: 180 CDRERDN-GCHGGLMDFAFEFIMKNGGIDTEDDYPYTAEEGMCQDNKMRRHVVTIDDYQD 238

Query: 257 IPA----------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE---- 290
           +P                       + AFQLY  GVFD  CG  L+HGV VVGYG     
Sbjct: 239 VPPNDEHALMKAVANQPVSVAIEADQRAFQLYGGGVFDAECGTALDHGVLVVGYGTASNG 298

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
            H   YWLVKNSWG  WG+ GYIR+ RN      G CG+ MQAS+P+K+
Sbjct: 299 THHLPYWLVKNSWGAEWGDKGYIRLLRN--LGEEGQCGVAMQASFPIKK 345


>gi|90265242|emb|CAH67695.1| H0624F09.3 [Oryza sativa Indica Group]
          Length = 494

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/293 (48%), Positives = 176/293 (60%), Gaps = 35/293 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW 134
           E +RRF ++  N++++D  N+   +   F+L  N+FADL+N EF +TYLG   P    R 
Sbjct: 84  EHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLG-TTPAGRGRR 142

Query: 135 PSVQYL-----GLPASVDWRKEGAVT-PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
               Y       LP SVDWR +GAV  PVK+QGQCGSCWAFSAVAAVEGINK+ TG+LVS
Sbjct: 143 VGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVS 202

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELV+C  N +N GCNGG M+ AF FI + GG+ TE+DYPY   + +C   K     
Sbjct: 203 LSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKV 262

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I G+E +P                          FQLY  GVF   CG  L+HGV  V
Sbjct: 263 VSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAV 322

Query: 287 GYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG D   G  YW V+NSWG  WGE GYIRM RN  ++  G CGI M ASYP+
Sbjct: 323 GYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNV-TARTGKCGIAMMASYPI 374


>gi|242077600|ref|XP_002448736.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
 gi|241939919|gb|EES13064.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
          Length = 467

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 186/313 (59%), Gaps = 40/313 (12%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEF 118
           +E WL ++ R   +   E   RF ++  N++++D  N +     F+L  N+FADL+N+EF
Sbjct: 56  YELWLVEHGRRVSNVLGEHDSRFRVFWDNLRFVDAHNERAGEHGFRLGMNQFADLTNDEF 115

Query: 119 ISTYLGYNKPYNEPRWPSVQYLG----------LPASVDWRKEGAVTPVKDQGQCGSCWA 168
            + YLG   P       S   +G          LP SVDWR++GAV PVK+QGQCGSCWA
Sbjct: 116 RAAYLGARIPAAR----SGNAVGEMYRHDGAEELPESVDWREKGAVAPVKNQGQCGSCWA 171

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAV++VE IN++ TG++V+LSEQELV+C  +  N GCNGG M+ AF FI K GG+ TED
Sbjct: 172 FSAVSSVESINQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFNFIIKNGGIDTED 231

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY+  + +C  ++     V+I  +E +P                          FQLY
Sbjct: 232 DYPYKAVDGKCDINRRNAKVVSIDAFEDVPENDEKSLQKAVAHQPVSVAIEAGGRQFQLY 291

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
             GVF   C   L+HGV  VGYG ++G+ YW+V+NSWG  WGEAGYIRM RN  ++  G 
Sbjct: 292 KSGVFSGSCTTNLDHGVVAVGYGTENGKDYWIVRNSWGPKWGEAGYIRMERN-INATTGK 350

Query: 327 CGILMQASYPVKR 339
           CGI M ASYP K+
Sbjct: 351 CGIAMMASYPTKK 363


>gi|30685308|ref|NP_566634.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315949|sp|Q9LT77.1|CPR1_ARATH RecName: Full=Probable cysteine proteinase At3g19400; Flags:
           Precursor
 gi|11994462|dbj|BAB02464.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642715|gb|AEE76236.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 362

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 180/307 (58%), Gaps = 31/307 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           +E WL +  + Y    E +RRF I+  N++++D  NS  + +F++   +FADL+NEEF +
Sbjct: 44  YEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRA 103

Query: 121 TYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            YL       +    + +YL      LP  VDWR  GAV  VKDQG CGSCWAFSAV AV
Sbjct: 104 IYLRKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAV 163

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG+L+SLSEQELVDCD    N GC+GG M  AFEFI K GG+ T+ DYPY   
Sbjct: 164 EGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 236 N-DRCQTDKTKH-HAVTITGYEAIP----------------------ARYAFQLYSHGVF 271
           +   C  DK  +   VTI GYE +P                      +  AFQLY  GV 
Sbjct: 224 DLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVM 283

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
              CG  L+HGV VVGYG   GE YW+++NSWG +WG++GY+++ RN      G CGI M
Sbjct: 284 TGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP-FGKCGIAM 342

Query: 332 QASYPVK 338
             SYP K
Sbjct: 343 MPSYPTK 349


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 188/311 (60%), Gaps = 30/311 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M + F  WL+++SR Y S  E QRRF I+  N+ YI   N Q  S+ L  NKF+DL+++E
Sbjct: 48  MLDVFHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQEKSYWLGLNKFSDLTHDE 107

Query: 118 FISTYLGYN---KPYNEPRWPSVQYLGLPAS--VDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           F + YLG     + +         Y  + A   VDWRK+GAV+ VKDQG CGSCWAFSA+
Sbjct: 108 FRALYLGIRPAGRAHGLRNGDRFIYEDVVAEEMVDWRKKGAVSDVKDQGSCGSCWAFSAI 167

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            +VEG+N + TG+L+SLSEQELVDCD   +NQGCNGG M+ AF+FI K GG+ TE+DYPY
Sbjct: 168 GSVEGVNAIVTGELISLSEQELVDCD-RGQNQGCNGGLMDYAFDFIIKNGGIDTEEDYPY 226

Query: 233 RGKNDRC-QTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHG 269
           +  + +C +  K     V I  Y+ +P +                        FQ Y  G
Sbjct: 227 KATDGQCDEARKETSKVVVIDDYQDVPTKSESSLLKAVSKNPVSVAIEAGGRDFQHYQGG 286

Query: 270 VFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           VF   CG  L+HGV  VGYG +D G  YW+VKNSWG SWGE GYIRM R   +S  G CG
Sbjct: 287 VFTGPCGTDLDHGVLAVGYGTDDDGVNYWIVKNSWGPSWGEKGYIRMERMGSNSTSGKCG 346

Query: 329 ILMQASYPVKR 339
           I ++ S+P+K+
Sbjct: 347 INIEPSFPIKK 357


>gi|414587996|tpg|DAA38567.1| TPA: hypothetical protein ZEAMMB73_390779 [Zea mays]
          Length = 343

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/316 (43%), Positives = 188/316 (59%), Gaps = 36/316 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFAD 112
           D  +M ER E W+  Y R Y    E  RRF ++  N+ +++  N+   + F L  N+FAD
Sbjct: 33  DDAAMAERHERWMAVYGRVYKDAAEKARRFEVFKDNLAFVESFNADKKNKFWLGVNQFAD 92

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYL-------GLPASVDWRKEGAVTPVKDQGQCGS 165
           L+ EEF +   G+ KP +    P+  +         LP +VDWR +GAVTP+K+QGQCG 
Sbjct: 93  LTTEEFKANK-GF-KPISAEEVPTTGFKYENLSVSALPTAVDWRTKGAVTPIKNQGQCGC 150

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EGI KL T  LVSLSEQELVDCD +S ++GC GG+M+ AFEF+ K GG+ 
Sbjct: 151 CWAFSAVAAMEGIVKLSTDNLVSLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLA 210

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAF 263
           TE  YPY+  + +C+       A TI G+E +P                      +   F
Sbjct: 211 TESSYPYKAVDGKCKGG--SKSAATIKGHEDVPPNNEAALMKAVASQPVSVAVDASDRTF 268

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
            LYS GV    CG QL+HG+  +GYG E  G KYW++KNSWGT+WGE  ++RM ++  S 
Sbjct: 269 MLYSGGVMTGSCGTQLDHGIAAIGYGVESDGTKYWILKNSWGTTWGEKRFLRMEKDI-SD 327

Query: 323 NIGICGILMQASYPVK 338
             G+CG+ M+ SYP +
Sbjct: 328 KQGMCGLAMKPSYPTE 343


>gi|224085750|ref|XP_002307688.1| predicted protein [Populus trichocarpa]
 gi|222857137|gb|EEE94684.1| predicted protein [Populus trichocarpa]
          Length = 436

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/306 (44%), Positives = 184/306 (60%), Gaps = 29/306 (9%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEF 118
           + FE W K++ + Y S++E   R  ++  N  ++   NS+ N S+ L  N FADL++ EF
Sbjct: 27  QLFETWCKEHGKSYTSQEERSHRLKVFEDNYDFVTKHNSKGNSSYSLALNAFADLTHHEF 86

Query: 119 ISTYLGYNKPYNEPRWPSVQYLG----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
            ++ LG +         +++  G    +PAS+DWR +G VT VKDQG CG+CW+FSA  A
Sbjct: 87  KTSRLGLSAAPLNLAHRNLEITGVVGDIPASIDWRNKGVVTNVKDQGSCGACWSFSATGA 146

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EGINK+ TG LVSLSEQEL++CD  S N GC GG M+ AF+F+    G+ TE+DYPYR 
Sbjct: 147 IEGINKIVTGSLVSLSEQELIECD-KSYNDGCGGGLMDYAFQFVINNHGIDTEEDYPYRA 205

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFD 272
           ++  C  D+ K   VTI  Y  +P                      +  AFQ+YS G+F 
Sbjct: 206 RDGTCNKDRMKRRVVTIDKYVDVPENNEKQLLQAVAAQPVSVGICGSERAFQMYSKGIFT 265

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             C   L+H V +VGYG ++G  YW+VKNSWGT WG  GY+ M RNS +S  G+CGI M 
Sbjct: 266 GPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTGWGMRGYMHMQRNSGNSQ-GVCGINML 324

Query: 333 ASYPVK 338
           ASYPVK
Sbjct: 325 ASYPVK 330


>gi|242048430|ref|XP_002461961.1| hypothetical protein SORBIDRAFT_02g011230 [Sorghum bicolor]
 gi|241925338|gb|EER98482.1| hypothetical protein SORBIDRAFT_02g011230 [Sorghum bicolor]
          Length = 380

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 190/338 (56%), Gaps = 56/338 (16%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI----DYINSQNLSFKLTDNK 109
           D   M ERF+ W   Y++ Y +  E +RRF +Y+ N+ YI        +  L+++L +  
Sbjct: 44  DNSPMIERFQRWKAAYNKSYATVAEDRRRFLVYARNMAYIEATNAEAEAAGLTYELGETA 103

Query: 110 FADLSNEEFISTYLGYNKPYNEP---------------RWPSVQYLG-----------LP 143
           + DL+N+EF++ Y     P   P               R   V  +G            P
Sbjct: 104 YTDLTNQEFMAMYTAAPSPAQLPADEDEDDAAEAVITTRAGPVDAVGQLPVYVNLSTAAP 163

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           ASVDWR  GAVTPVK+QG+CGSCWAFS VA VEGI +++TGKLVSLSEQELVDCD  + +
Sbjct: 164 ASVDWRASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQELVDCD--TLD 221

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA- 262
            GC+GG   +A  +IT  GG+TTE+DYPY G  D C   K  H+A +I G   +  R   
Sbjct: 222 AGCDGGISYRALRWITSNGGLTTEEDYPYTGTTDACNRAKLAHNAASIAGLRRVATRSEA 281

Query: 263 ---------------------FQLYSHGVFDEYCGHQLNHGVTVVGYG--EDHGEKYWLV 299
                                FQ Y  GV++  CG  LNHGVTVVGYG  E+ G+KYW++
Sbjct: 282 SLANAVAGQPVAVSIEAGGDNFQHYKRGVYNGPCGTSLNHGVTVVGYGQEEEDGDKYWII 341

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWG SWG+ GYI+M ++      G+CGI ++ S+P+
Sbjct: 342 KNSWGASWGDGGYIKMRKDVAGKPEGLCGIAIRPSFPL 379


>gi|356545116|ref|XP_003540991.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/347 (42%), Positives = 198/347 (57%), Gaps = 47/347 (13%)

Query: 26  RNAVLSLFLL---WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           +  +L +FL+   W   + +   SE Y           + E W+ QY + Y    E ++R
Sbjct: 7   KKNILVVFLVLTVWTSQVMSRRLSEAYSS--------VKHEKWMAQYGKVYKDAAEKEKR 58

Query: 83  FGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYL-GYNKPYN-------EPR 133
           F I+ +NV +I+  ++  +  F L+ N+FADL   +F +  + G  K +N       E  
Sbjct: 59  FQIFKNNVHFIESFHAAGDKPFNLSINQFADL--HKFKALLINGQKKEHNVRTATATEAS 116

Query: 134 WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           +       +P+S+DWRK GAVTP+KDQG C SCWAFS VA +EG++++  G+LVSLSEQE
Sbjct: 117 FKYDSVTRIPSSLDWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHQITKGELVSLSEQE 176

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDC V  +++GC GGY+E AFEFI K GGV +E  YPY+G N  C+  K  H  V I G
Sbjct: 177 LVDC-VKGDSEGCYGGYVEDAFEFIAKKGGVASETHYPYKGVNKTCKVKKETHGVVQIKG 235

Query: 254 YEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           YE +P+                       YAFQ YS G+F   CG  ++H VTVVGYG+ 
Sbjct: 236 YEQVPSNSEKALLKAVAHQPVSAYVEAGGYAFQFYSSGIFTGKCGTDIDHSVTVVGYGKA 295

Query: 292 H-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             G KYWLVKNSWGT WGE GYIRM R+  +   G+CGI   A YP 
Sbjct: 296 RGGNKYWLVKNSWGTEWGEKGYIRMKRDIRAKE-GLCGIATGALYPT 341


>gi|115461226|ref|NP_001054213.1| Os04g0670500 [Oryza sativa Japonica Group]
 gi|62510688|sp|Q7XR52.2|CYSP1_ORYSJ RecName: Full=Cysteine protease 1; AltName: Full=OsCP1; Flags:
           Precursor
 gi|38345300|emb|CAE02828.2| OSJNBa0043A12.33 [Oryza sativa Japonica Group]
 gi|113565784|dbj|BAF16127.1| Os04g0670500 [Oryza sativa Japonica Group]
 gi|215741575|dbj|BAG98070.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 490

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/293 (48%), Positives = 176/293 (60%), Gaps = 35/293 (11%)

Query: 78  EWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW 134
           E +RRF ++  N++++D  N+   +   F+L  N+FADL+N EF +TYLG   P    R 
Sbjct: 84  EHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLG-TTPAGRGRR 142

Query: 135 PSVQYL-----GLPASVDWRKEGAVT-PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
               Y       LP SVDWR +GAV  PVK+QGQCGSCWAFSAVAAVEGINK+ TG+LVS
Sbjct: 143 VGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVS 202

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQELV+C  N +N GCNGG M+ AF FI + GG+ TE+DYPY   + +C   K     
Sbjct: 203 LSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKV 262

Query: 249 VTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I G+E +P                          FQLY  GVF   CG  L+HGV  V
Sbjct: 263 VSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAV 322

Query: 287 GYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG D   G  YW V+NSWG  WGE GYIRM RN  ++  G CGI M ASYP+
Sbjct: 323 GYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNV-TARTGKCGIAMMASYPI 374


>gi|449522968|ref|XP_004168497.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 348

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/350 (43%), Positives = 196/350 (56%), Gaps = 41/350 (11%)

Query: 22  RMMLRNAVLSLFLLWVLGIP---AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGS 75
           +++     +S F++   G      G W E      D  SM+   E FE W+  + + Y +
Sbjct: 5   KLLPLAMCMSFFVVTSFGKDFSIVGYWPE------DLTSMDRLIELFEEWISNHGKIYET 58

Query: 76  EDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP 135
            +E   RF ++  N+++ID  N +  S+ L  N+FADL+++EF + YLG     +  R  
Sbjct: 59  IEEKWHRFEVFKDNLKHIDETNKKVTSYWLGVNEFADLTHQEFKNMYLGLKVESSRTRQS 118

Query: 136 SVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             ++     + LP SVDWRK+GAVT VK+QG CGSCWAFS VAAVEGINK+  G L SLS
Sbjct: 119 PEEFTYKDVVDLPKSVDWRKKGAVTRVKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLS 178

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQEL+DCD    N GC+GG M+ AF FI   GG+  E+DYPY      C   K +   VT
Sbjct: 179 EQELIDCD-RPYNNGCHGGLMDYAFSFIVSSGGLHKEEDYPYLEVESTCDNKKGELEVVT 237

Query: 251 ITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I+GY+ +P                      +   FQ YS GVFD  CG QL+HGVT VGY
Sbjct: 238 ISGYKDVPENNEASLIKALAHQPLSVAIEASGRDFQFYSGGVFDGPCGTQLDHGVTAVGY 297

Query: 289 GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G   G  Y +VKNSWG  WGE GYIRM RN+     G+CGI   ASYP K
Sbjct: 298 GSSKGVDYIIVKNSWGPKWGEKGYIRMKRNT-GKPAGLCGINKMASYPTK 346


>gi|242081867|ref|XP_002445702.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
 gi|241942052|gb|EES15197.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
          Length = 372

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 187/312 (59%), Gaps = 42/312 (13%)

Query: 62  FENWLKQYS--REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E W  +++  R+ G +    RRF ++  NV+ I   N ++  +KL  N+F D++ +EF 
Sbjct: 47  YERWRGRHAVARDLGDK---ARRFNVFKENVRLIHDFNQRDEPYKLRLNRFGDMTADEFR 103

Query: 120 STYLG----YNKPYNEPRWPSVQ---YLG---LPASVDWRKEGAVTPVKDQGQCGSCWAF 169
             Y G    +++ +   R  S     Y G   LP SVDWR++GAVT VKDQGQCGSCWAF
Sbjct: 104 RHYAGSRVAHHRMFRGDRQGSASSFMYAGARDLPTSVDWRQKGAVTDVKDQGQCGSCWAF 163

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S +AAVEGIN +KT  L SLSEQ+LVDCD    N GC+GG M+ AF++I K GGV  ED 
Sbjct: 164 STIAAVEGINAIKTKNLTSLSEQQLVDCDTKG-NAGCDGGLMDYAFQYIAKHGGVAAEDA 222

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYS 267
           YPY+ +   C+  K+   AVTI GYE +PA                         FQ YS
Sbjct: 223 YPYKARQASCK--KSPAPAVTIDGYEDVPANDESALKKAVAHQPVSVAIEASGSHFQFYS 280

Query: 268 HGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            GVF   CG +L+HGVT VGYG    G KYW+VKNSWG  WGE GYIRMAR+  +   G 
Sbjct: 281 EGVFAGRCGTELDHGVTAVGYGVAADGTKYWVVKNSWGPEWGEKGYIRMARDVAAKE-GH 339

Query: 327 CGILMQASYPVK 338
           CGI M+ASYPVK
Sbjct: 340 CGIAMEASYPVK 351


>gi|2463586|dbj|BAA22545.1| FB22 precursor [Ananas comosus]
          Length = 340

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/346 (43%), Positives = 203/346 (58%), Gaps = 40/346 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   ++   L LFL  +   P+ A  +   +  DP  M +RFE W+ +Y R Y   DE  
Sbjct: 1   MASKVQLVFLFLFLCVMWASPSAASRD---EPSDP--MMKRFEEWMAEYGRVYKDNDEKM 55

Query: 81  RRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY 139
           RRF I+ +NV +I+  N++N  S+ L  NKF D++N EF++ Y G + P N  R P V +
Sbjct: 56  RRFQIFKNNVNHIETFNNRNGNSYTLGINKFTDMTNNEFVTQYTGVSLPLNFKREPVVSF 115

Query: 140 -----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  +  S+DWR  GAVT VKDQ  CGSCWAFSA+A VEGI K+ TG LVSLSEQE+
Sbjct: 116 DDVNISAVGQSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGIYKIVTGYLVSLSEQEV 175

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           +DC V++   GC+GG+++ A++FI    GV +E DYPY+     C  +   + A  ITGY
Sbjct: 176 LDCAVSN---GCDGGFVDNAYDFIISNNGVASEADYPYQAYEGDCTANSWPNSAY-ITGY 231

Query: 255 EAIPA------RYA----------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED- 291
             + +      +YA                FQ Y+ GVF   CG  LNH +T++GYG+D 
Sbjct: 232 SYVRSNDESSMKYAVWNQPIAAAIDASGDNFQYYNGGVFSGPCGTSLNHAITIIGYGQDS 291

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            G +YW+VKNSWG+SWGE GY+RMAR   SS  G+CGI M   YP 
Sbjct: 292 SGTQYWIVKNSWGSSWGERGYVRMARGVSSS--GLCGIAMDPLYPT 335


>gi|357133074|ref|XP_003568153.1| PREDICTED: cysteine proteinase RD21a-like [Brachypodium distachyon]
          Length = 565

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/318 (44%), Positives = 182/318 (57%), Gaps = 40/318 (12%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL---------SFKLTDNK 109
           E  FE W  ++ + Y S  E   R   ++ N  ++   N+            S+ L  N 
Sbjct: 39  EPLFEAWCAEHGKAYASPGERAARLAAFADNAAFVAAHNAGGGGAGGSNAAPSYTLALNA 98

Query: 110 FADLSNEEFISTYLG------YNKPYNEPRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           FADL++ EF +  LG         P +E  +  SV    +P ++DWR+ GAVT VKDQG 
Sbjct: 99  FADLTHAEFRAARLGRLAVGGARAPPSEGGFAGSVGVGAVPEALDWRQSGAVTKVKDQGS 158

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CG+CW+FSA  A+EGINK+KTG L+SLSEQEL+DCD  S N GC GG M+ A+ F+ K G
Sbjct: 159 CGACWSFSATGAIEGINKIKTGSLISLSEQELIDCD-RSYNAGCGGGLMDYAYRFVIKNG 217

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------------- 260
           G+ TEDDYPYR  +  C  +K K H VTI GY  +PA                       
Sbjct: 218 GIDTEDDYPYREADGTCNKNKLKRHVVTIDGYSDVPANKEDSLLQAVAQQPISVGICGSA 277

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            AFQLYS G+FD  C   L+H V +VGYG + G+ YW+VKNSWG  WG  GY+ M RN+ 
Sbjct: 278 RAFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNTG 337

Query: 321 SSNIGICGILMQASYPVK 338
           SS+ GICGI M AS+P K
Sbjct: 338 SSS-GICGINMMASFPTK 354


>gi|297845064|ref|XP_002890413.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336255|gb|EFH66672.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 144/324 (44%), Positives = 186/324 (57%), Gaps = 42/324 (12%)

Query: 53  YDPQSME------ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLT 106
           Y P+ +E      E FENW+  + + Y + +E   RF ++  N+++ID  N +  S+ L 
Sbjct: 36  YSPEDLESHDKLIELFENWISNFEKAYETVEEKLLRFEVFKDNLKHIDETNKKVKSYWLG 95

Query: 107 DNKFADLSNEEFISTYLGYN---------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
            N+FADLS+EEF   YLG           + Y E  +  V+   +P SVDWRK+GAV  V
Sbjct: 96  LNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVE--AVPKSVDWRKKGAVAEV 153

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+QG CGSCWAFS VAAVEGINK+ TG L +LSEQEL+DCD  + N GCNGG M+ AFE+
Sbjct: 154 KNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDT-TYNNGCNGGLMDYAFEY 212

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------- 260
           I K GG+  E+DYPY  +   C+  K +   VTI G++ +P                   
Sbjct: 213 IVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTIDGHQDVPTNDEKSLLKALAHQPLSVA 272

Query: 261 -----YAFQLYSH-GVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIR 314
                  FQ YS   VFD  CG  L+HGV  VGYG   G  Y +VKNSWG  WGE GYIR
Sbjct: 273 IDASGREFQFYSGVSVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIR 332

Query: 315 MARNSPSSNIGICGILMQASYPVK 338
           + RN+     G+CGI   AS+P K
Sbjct: 333 LKRNTGKPE-GLCGINKMASFPTK 355


>gi|449455625|ref|XP_004145553.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 351

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/342 (44%), Positives = 193/342 (56%), Gaps = 41/342 (11%)

Query: 30  LSLFLLWVLGIP---AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRF 83
           +S F++   G      G W E      D  SM+   E FE W+  + + Y + +E   RF
Sbjct: 16  MSFFVVTSFGKDFSIVGYWPE------DLTSMDRLIELFEEWISNHGKIYETIEEKWHRF 69

Query: 84  GIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---- 139
            ++  N+++ID  N +  S+ L  N+FADL+++EF + YLG     +  R    ++    
Sbjct: 70  EVFKDNLKHIDETNKKVTSYWLGVNEFADLTHQEFKNMYLGLKVESSRTRQSPEEFTYKD 129

Query: 140 -LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
            + LP SVDWRK+GAVT VK+QG CGSCWAFS VAAVEGINK+  G L SLSEQEL+DCD
Sbjct: 130 VVDLPKSVDWRKKGAVTRVKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLSEQELIDCD 189

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
               N GC+GG M+ AF FI   GG+  E+DYPY      C   K +   VTI+GY+ +P
Sbjct: 190 -RPYNNGCHGGLMDYAFSFIVSSGGLHKEEDYPYLEVESTCDNKKGELEVVTISGYKDVP 248

Query: 259 ----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKY 296
                                 +   FQ YS GVFD  CG QL+HGVT VGYG   G  Y
Sbjct: 249 ENNEASLIKALAHQPLSVAIEASGRDFQFYSGGVFDGPCGTQLDHGVTAVGYGSSKGVDY 308

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            +VKNSWG  WGE GYIRM RN+     G+CGI   ASYP K
Sbjct: 309 IIVKNSWGPKWGEKGYIRMKRNT-GKPAGLCGINKMASYPTK 349


>gi|356509992|ref|XP_003523725.1| PREDICTED: oryzain alpha chain-like [Glycine max]
          Length = 439

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/313 (45%), Positives = 182/313 (58%), Gaps = 39/313 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL------SFKLTDNKFADL 113
           E FE W K++S+ Y SE+E   R  ++  N  ++   N          S+ L+ N FADL
Sbjct: 31  ELFEKWCKEHSKTYSSEEEKLYRLKVFEDNYAFVAQHNQNANNNNNNSSYTLSLNAFADL 90

Query: 114 SNEEFISTYLG-------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ++ EF +T LG       + +P N+    S   L +P+ +DWR+ GAVTPVKDQ  CG+C
Sbjct: 91  THHEFKTTRLGLPLTLLRFKRPQNQQ---SRDLLHIPSQIDWRQSGAVTPVKDQASCGAC 147

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA  A+EGINK+ TG LVSLSEQEL+DCD  S N GC GG M+ A++F+    G+ T
Sbjct: 148 WAFSATGAIEGINKIVTGSLVSLSEQELIDCDT-SYNSGCGGGLMDFAYQFVIDNKGIDT 206

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQL 265
           EDDYPY+ +   C  DK K  AVTI  Y  +P                     +   FQL
Sbjct: 207 EDDYPYQARQRSCSKDKLKRRAVTIEDYVDVPPSEEEILKAVASQPVSVGICGSEREFQL 266

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           YS G+F   C   L+H V +VGYG ++G  YW+VKNSWG  WG  GYI M RNS +S  G
Sbjct: 267 YSKGIFTGPCSTFLDHAVLIVGYGSENGVDYWIVKNSWGKYWGMNGYIHMIRNSGNSK-G 325

Query: 326 ICGILMQASYPVK 338
           ICGI   ASYPVK
Sbjct: 326 ICGINTLASYPVK 338


>gi|600111|emb|CAA84378.1| cysteine proteinase [Vicia sativa]
          Length = 359

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 183/295 (62%), Gaps = 36/295 (12%)

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTY----LGYNKPYNEP 132
           DE   RF ++ +NV ++   N  +  +KL  NKF D++N EF   Y    + +++ +   
Sbjct: 54  DEKHNRFNVFKANVMHVHNTNKLDKPYKLKLNKFGDMTNYEFRRIYADSKISHHRMFRGM 113

Query: 133 RWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
              +  ++      +P+S+DWR +GAVT VKDQGQCGSCWAFS +AAVEGIN++KT KLV
Sbjct: 114 SHENGTFMYENAVDVPSSIDWRNKGAVTGVKDQGQCGSCWAFSTIAAVEGINQIKTQKLV 173

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDCD   EN+GCNGG ME AFEFI K  G+TTE +YPY  K+  C  +K +  
Sbjct: 174 SLSEQQLVDCDT-EENEGCNGGLMEYAFEFI-KQNGITTESNYPYAAKDGTCDVEK-EDK 230

Query: 248 AVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTV 285
           AV+I G+E +P                        Y FQ YS GVF  +C   LNHGV +
Sbjct: 231 AVSIDGHENVPINNEAALLKAAAKQPVSVAIDAGGYNFQFYSEGVFTGHCDTDLNHGVAI 290

Query: 286 VGYGEDHGE-KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG      KYW++KNSWG+ WGE GYIRM R   SS  G+CGI M+ASYP+K+
Sbjct: 291 VGYGVTQDRTKYWIMKNSWGSEWGEQGYIRMQR-GISSREGLCGIAMEASYPIKK 344


>gi|357126406|ref|XP_003564878.1| PREDICTED: cysteine proteinase EP-B 1-like [Brachypodium
           distachyon]
          Length = 377

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 187/322 (58%), Gaps = 40/322 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI---------DYINSQNLSFKLT 106
           +++ E +  W   +        E  RRFG + SNV +I            N+   S++L 
Sbjct: 36  EALWELYTRWQSAHRLPPQHHAEKHRRFGTFKSNVLFIHAHNTRLNDTSTNNNGPSYRLR 95

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQG 161
            N+F D+   EF ST+ G    +  P      ++      +P +VDWR++GAVT VKDQG
Sbjct: 96  LNRFGDMDQAEFRSTFAGPLHRHTRPAQSIPGFIYDTVKDIPQAVDWRQKGAVTGVKDQG 155

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT-K 220
           +CGSCWAFSAVA+VEG+N ++TG LVSLSEQEL+DCD   ++ GC GG ME AFEFI   
Sbjct: 156 KCGSCWAFSAVASVEGLNAIRTGSLVSLSEQELIDCDTGGDDNGCQGGLMESAFEFIAHS 215

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA--------------------- 259
            GG+ TE  YPY   N  C  ++    +V I G++++PA                     
Sbjct: 216 AGGLATEAAYPYHASNGTCNANRGSSVSVRIDGHQSVPAGNEEALAKAVAHQPVSVAIDA 275

Query: 260 -RYAFQLYSHGVFDEYCGHQLNHGVTVVGYG--EDHGEKYWLVKNSWGTSWGEAGYIRMA 316
              AFQ YS GVF   CG +L+HGV VVGYG  E+ G++YW+VKNSWG  WGE GY+RM 
Sbjct: 276 GGQAFQFYSEGVFTGDCGSELDHGVAVVGYGVAEEDGKEYWIVKNSWGPGWGEHGYVRMQ 335

Query: 317 RNSPSSNIGICGILMQASYPVK 338
           R+S   + G+CGI M+ASYPVK
Sbjct: 336 RDS-GVDGGLCGIAMEASYPVK 356


>gi|30141023|dbj|BAC75925.1| cysteine protease-3 [Helianthus annuus]
          Length = 348

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 139/315 (44%), Positives = 185/315 (58%), Gaps = 38/315 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W  Q+     + DE ++RF ++  NV +I+ +N     +KL  N+FAD++N
Sbjct: 34  KSLWDLYERWGSQHMVSR-APDEKKKRFNVFKYNVNHINRVNQLGKPYKLKLNEFADMTN 92

Query: 116 EEFISTY----LGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            EF + +    L +     + R   +   +    P S+DWR  GAV P+K+QG+CGSCWA
Sbjct: 93  HEFKAGFDSKILHFRMLKGKRRQTPFTHAKTTDPPPSIDWRTNGAVNPIKNQGRCGSCWA 152

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS +  VEGINK+KT +LVSLSEQELVDC+ + E  GCNGG ME  +EFI + GGVTTE 
Sbjct: 153 FSTIVGVEGINKIKTNQLVSLSEQELVDCETDCE--GCNGGLMENGYEFIKETGGVTTEQ 210

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
            YPY  +N RC   K     V I G+E +PA                         FQ Y
Sbjct: 211 IYPYFARNGRCDISKRNSPVVKIDGFENVPANDESAMLRAVANQPVSIAIDAGGLNFQFY 270

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMAR--NSPSSN 323
           S GVF+  CG +LNHGV +VGYG    G  YW+V+NSWGT WGE GY+RM R  N P   
Sbjct: 271 SQGVFNGACGTELNHGVAIVGYGTTQDGTNYWIVRNSWGTGWGEQGYVRMQRGVNVPE-- 328

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M ASYP+K
Sbjct: 329 -GLCGLAMDASYPIK 342


>gi|334904467|gb|AEH26024.1| cysteine peptidase [Ananas comosus]
          Length = 352

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 149/346 (43%), Positives = 200/346 (57%), Gaps = 39/346 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   ++   L LFL  +   P+ A  +   +  DP  M +RFE W+ +Y R Y   DE  
Sbjct: 1   MASKVQLVFLFLFLCVMWASPSAASRD---EPSDP--MMKRFEEWMAEYGRVYKDNDEKM 55

Query: 81  RRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPSVQ 138
           RRF I+ +NV +I+  NS N  S+ L  N+F D++  EF++ Y G  ++P N  R P V 
Sbjct: 56  RRFQIFKNNVNHIETFNSHNGNSYTLGINQFTDMTKSEFVAQYTGGISRPLNIEREPVVS 115

Query: 139 Y-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           +       +P S+DWR  GAV  VK+Q  CGSCWAF+A+A VEGI K+KTG LVSLSEQE
Sbjct: 116 FDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWAFAAIATVEGIYKIKTGYLVSLSEQE 175

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           ++DC V   + GC GG++ KA++FI    GVTTE++YPY+     C  +   + A  ITG
Sbjct: 176 VLDCAV---SYGCKGGWVNKAYDFIISNNGVTTEENYPYQAYQGTCNANSFPNSAY-ITG 231

Query: 254 YE---------------------AIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED- 291
           Y                       I A   FQ Y+ GVF   CG  LNH +T++GYG+D 
Sbjct: 232 YSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGPCGTSLNHAITIIGYGQDS 291

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            G KYW+V+NSWG+SWGE GY+RMAR   SS+ G CGI M   +P 
Sbjct: 292 SGTKYWIVRNSWGSSWGEGGYVRMARGVSSSS-GACGIAMSPLFPT 336


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  260 bits (665), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 181/314 (57%), Gaps = 32/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           Q +  +F  W  ++ + Y + +E   RF ++  N++YI   + +NLS+ L   KFADL+N
Sbjct: 39  QLLAGQFAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQRHSEKNLSYWLGLTKFADLTN 98

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLG--------LPASVDWRKEGAVTPVKDQGQCGSCW 167
           EEF   Y G     +          G         P S+DWR++GAVT VKDQG CGSCW
Sbjct: 99  EEFRRQYTGTRIDRSRRLKKGRNATGSFRYANSEAPKSIDWREKGAVTSVKDQGSCGSCW 158

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAV +VEGIN ++TG  +SLS QELVDCD    NQGCNGG M+ AF+F+ + GG+ TE
Sbjct: 159 AFSAVGSVEGINAIRTGDAISLSVQELVDCD-KKYNQGCNGGLMDYAFDFVIQNGGIDTE 217

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            DYPY+G + RC  +K     VTI  YE +P                          FQL
Sbjct: 218 KDYPYQGYDGRCDVNKMNARVVTIDSYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQL 277

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN-I 324
           YS GVF   CG  L+HGV  VGYG + G  YW+VKNSWG  WGE+GY+RM RN    N  
Sbjct: 278 YSGGVFTGRCGTDLDHGVLAVGYGSEKGLDYWIVKNSWGEYWGESGYLRMQRNLKDDNGY 337

Query: 325 GICGILMQASYPVK 338
           G+CGI ++ SY VK
Sbjct: 338 GLCGINIEPSYAVK 351


>gi|2463588|dbj|BAA22546.1| FB1035 precursor [Ananas comosus]
          Length = 324

 Score =  260 bits (665), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/312 (45%), Positives = 188/312 (60%), Gaps = 35/312 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFAD 112
           DP  M +RFE W+ +Y R Y   DE  RRF I+ +NV++I+  NS+N  S+ L  N+F D
Sbjct: 4   DP--MMKRFEEWMAEYGRIYKDNDEKMRRFQIFKNNVKHIETFNSRNGNSYTLGINQFTD 61

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           ++  EF++ Y G + P N  R P V +       +P S+DWR  GAV  VK+Q  CGSCW
Sbjct: 62  MTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCW 121

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AF+A+A VEGI K+KTG LVSLSEQE++DC V   + GC GG++ KA++FI    GVTTE
Sbjct: 122 AFAAIATVEGIYKIKTGYLVSLSEQEVLDCAV---SYGCKGGWVNKAYDFIISNNGVTTE 178

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYE---------------------AIPARYAFQLY 266
           ++YPY+     C  +   + A  ITGY                       I A   FQ Y
Sbjct: 179 ENYPYQAYQGTCNANSFPNSAY-ITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYY 237

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           + GVF   CG  LNH +T++GYG+D  G KYW+V+NSWG+SWGE GY+RMAR   SS+ G
Sbjct: 238 NGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSS-G 296

Query: 326 ICGILMQASYPV 337
            CGI M   +P 
Sbjct: 297 ACGIAMSPLFPT 308


>gi|2160175|gb|AAB60738.1| Strong similarity to Dianthus cysteine proteinase (gb|U17135)
           [Arabidopsis thaliana]
          Length = 416

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 145/321 (45%), Positives = 195/321 (60%), Gaps = 47/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNE 116
           + E F++W +++ + YGSE+E Q+R  I+  N  ++   N   N ++ L+ N FADL++ 
Sbjct: 26  ISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHH 85

Query: 117 EFISTYLGYNKPYNEPRWPSV------QYLG----LPASVDWRKEGAVTPVKDQGQCGSC 166
           EF ++ LG +        PSV      Q LG    +P SVDWRK+GAVT VKDQG CG+C
Sbjct: 86  EFKASRLGLSVSA-----PSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGAC 140

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FSA  A+EGIN++ TG L+SLSEQEL+DCD  S N GCNGG M+ AFEF+ K  G+ T
Sbjct: 141 WSFSATGAMEGINQIVTGDLISLSEQELIDCD-KSYNAGCNGGLMDYAFEFVIKNHGIDT 199

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGY------------EAIPAR----------YAFQ 264
           E DYPY+ ++  C+ DK K   VTI  Y            EA+ A+           AFQ
Sbjct: 200 EKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQ 259

Query: 265 LYS-------HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
           LYS        G+F   C   L+H V +VGYG  +G  YW+VKNSWG SWG  G++ M R
Sbjct: 260 LYSSKFYLLMQGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQR 319

Query: 318 NSPSSNIGICGILMQASYPVK 338
           N+ +S+ G+CGI M ASYP+K
Sbjct: 320 NTENSD-GVCGINMLASYPIK 339


>gi|297843784|ref|XP_002889773.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335615|gb|EFH66032.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 439

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 192/309 (62%), Gaps = 32/309 (10%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEF 118
           E F++W +++ + YGSE+E Q+R  I+  N  ++   N   N ++ L+ N FADL++ EF
Sbjct: 30  ELFDDWCQRHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEF 89

Query: 119 ISTYLGYNKPYNEPRWPSV-QYLG----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            ++ LG +   +     S  Q LG    +P SVDWRK+GAVT VKDQG CG+CW+FSA  
Sbjct: 90  KASRLGLSVSASSLIMASKGQSLGGNAKVPDSVDWRKKGAVTNVKDQGSCGACWSFSATG 149

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EGIN++ TG L+SLSEQEL+DCD  S N GCNGG M+ AFEF+ K  G+ TE DYPY+
Sbjct: 150 AMEGINQIVTGDLISLSEQELIDCD-KSYNAGCNGGLMDYAFEFVIKNHGIDTEKDYPYQ 208

Query: 234 GKNDRCQTDKTKHHAVTITGY------------EAIPAR----------YAFQLYSH--G 269
            ++  C+ DK K   VTI  Y            EA+ A+           AFQLYS   G
Sbjct: 209 ERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALREAVAAQPVSVGICGSERAFQLYSRVSG 268

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           +F   C   L+H V +VGYG  +G  YW+VKNSWG SWG  G++ M RN+ +S  GICGI
Sbjct: 269 IFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTGNSE-GICGI 327

Query: 330 LMQASYPVK 338
            M ASYP+K
Sbjct: 328 NMLASYPIK 336


>gi|358248896|ref|NP_001239703.1| uncharacterized protein LOC100799247 precursor [Glycine max]
 gi|255636729|gb|ACU18700.1| unknown [Glycine max]
          Length = 341

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/310 (44%), Positives = 189/310 (60%), Gaps = 34/310 (10%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEF 118
           ER E W+ QY + Y    E ++RF ++ +NVQ+I+  N+  +  F L+ N+FADL +EEF
Sbjct: 33  ERHEKWMAQYGKVYKDAAEKEKRFQVFKNNVQFIESFNAAGDKPFNLSINQFADLHDEEF 92

Query: 119 ISTYLGYNKPYN------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWAFSA 171
            +      K  +      E  +       +P+++DWRK GAVTP+KDQG  CGSCWAF+ 
Sbjct: 93  KALLNNVQKKASRVETATETSFRYENVTKIPSTMDWRKRGAVTPIKDQGYTCGSCWAFAT 152

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           VA VE ++++ TG+LVSLSEQELVDC V  +++GC GGY+E AFEFI   GG+T+E  YP
Sbjct: 153 VATVESLHQITTGELVSLSEQELVDC-VRGDSEGCRGGYVENAFEFIANKGGITSEAYYP 211

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y+GK+  C+  K  H    I GYE++P+                        AF+ YS G
Sbjct: 212 YKGKDRSCKVKKETHGVARIIGYESVPSNSEKALLKAVANQPVSVYIDAGAIAFKFYSSG 271

Query: 270 VFD-EYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           +F+   CG  L+H V VVGYG+   G KYWLVKNSW T+WGE GY+R+ R+  +   G+C
Sbjct: 272 IFEARNCGTHLDHAVAVVGYGKLRDGTKYWLVKNSWSTAWGEKGYMRIKRDIRAKK-GLC 330

Query: 328 GILMQASYPV 337
           GI   ASYP+
Sbjct: 331 GIASNASYPI 340


>gi|225458143|ref|XP_002280937.1| PREDICTED: cysteine proteinase RD21a [Vitis vinifera]
 gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  260 bits (664), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/315 (45%), Positives = 182/315 (57%), Gaps = 36/315 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           +  S  + FE W +QY + Y SE+E   R  ++  N  ++   NS  N S+ L  N FAD
Sbjct: 21  EASSTADLFEAWCEQYGKTYSSEEEKASRLKVFEENHAFVTQHNSMANASYTLALNAFAD 80

Query: 113 LSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           L++ EF ++ LG++       +    P    VQ L +P +VDWRK GAVT VKDQG CG 
Sbjct: 81  LTHHEFKASRLGFSPGRAQSIRSVGTP----VQELHVPPAVDWRKSGAVTGVKDQGNCGG 136

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FS   A+EGINK+ TG LVSLSEQELVDCD  S N GC GG M+ A++F+ K  G+ 
Sbjct: 137 CWSFSTTGAIEGINKIVTGSLVSLSEQELVDCD-RSYNSGCEGGLMDYAYQFVIKNQGID 195

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAF 263
           +E DYPY G +  C  +K K H VTI GY  IP                      +   F
Sbjct: 196 SEADYPYVGMDKPCNKEKLKKHIVTIDGYTDIPPNDEKQLLQVVAKQPVSVGICGSEKTF 255

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           QLYS GV+   C   L+H V +VGYG + G  +W+VKNSWG  WG  GYI M RN+ ++ 
Sbjct: 256 QLYSKGVYTGPCSSTLDHAVLIVGYGTEDGVDFWIVKNSWGEHWGMRGYIHMLRNNGTAE 315

Query: 324 IGICGILMQASYPVK 338
            GICGI M ASYP K
Sbjct: 316 -GICGINMLASYPAK 329


>gi|219884655|gb|ACL52702.1| unknown [Zea mays]
 gi|413916718|gb|AFW56650.1| thiol protease SEN102 [Zea mays]
          Length = 349

 Score =  260 bits (664), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 144/317 (45%), Positives = 189/317 (59%), Gaps = 42/317 (13%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +RF+ W  +Y+R Y + +E+Q+RF +YS NV++I+ +N    S++L +N+FADL+ EEF 
Sbjct: 35  DRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMNQPGSSYELGENQFADLTEEEFK 94

Query: 120 STYLGYNKPYNEPRWPSVQYLGL-----------------PASVDWRKEGAVTPVKDQGQ 162
            TYL   K  N    P    L +                 P SVDWR +GAVTPVK Q  
Sbjct: 95  DTYL--MKLDNVASSPEAMALTVDTMNRAGTSGGSNTNEAPNSVDWRTKGAVTPVKSQQH 152

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAF+AVA++EG++K+KTG+LVSLSEQE+VDCD    N GC+GG+   A E++T+ G
Sbjct: 153 CGSCWAFAAVASIEGVHKIKTGRLVSLSEQEIVDCDRGGNNHGCHGGHSSSAMEWVTRNG 212

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA---------------------IPARY 261
           G+TTE DYPY G+  +C +DK  HHA  I G +A                     I A  
Sbjct: 213 GLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGALQHAVAGRPVAVSINASR 272

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AFQ Y  G+F   C    NH VTVVGYG +  G KYW+VKNSWG  WGE GY+RM R   
Sbjct: 273 AFQFYKRGIFSGPCNTTRNHAVTVVGYGANASGHKYWIVKNSWGERWGEKGYVRMQRGVR 332

Query: 321 SSNIGICGILMQASYPV 337
           +   G+CGI +   Y V
Sbjct: 333 ARE-GVCGIAIAPFYAV 348


>gi|226499884|ref|NP_001148278.1| thiol protease SEN102 precursor [Zea mays]
 gi|195617112|gb|ACG30386.1| thiol protease SEN102 precursor [Zea mays]
          Length = 374

 Score =  260 bits (664), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 193/334 (57%), Gaps = 52/334 (15%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNK 109
           D  SM ERF+ W   Y++ Y +  E +RRF +Y+ N+ YI+  N++     L+++L +  
Sbjct: 42  DDSSMIERFQRWKAAYNKSYATVAEERRRFRVYARNMAYIEATNAEAEAAGLTYELGETA 101

Query: 110 FADLSNEEFISTYLG---YNKPYNEP----RWPSVQYLG---------------LPASVD 147
           + DL+N+EF++ Y        P +E     R   V  +G                PASVD
Sbjct: 102 YTDLTNQEFMAMYTAPALAQLPADESVITTRAGPVDAVGGAPGQLPVYVNLSASAPASVD 161

Query: 148 WRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCN 207
           WR  GAVTPVK+QG+CGSCWAFS VA VEGI +++TGKLVSLSEQELVDCD  + + GC+
Sbjct: 162 WRASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQELVDCD--TLDDGCD 219

Query: 208 GGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----- 262
           GG   +A  +I   GG+TTE DYPY G  D C   K  H+AV+I G   +  R       
Sbjct: 220 GGISYRALRWIASNGGITTEADYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSEASLAN 279

Query: 263 -----------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED--HGEKYWLVKNSW 303
                            FQ Y  GV++  CG  LNHGVTVVGYG++   G++YW+VKNSW
Sbjct: 280 AVAGQPVAVSIEAGGDNFQHYKKGVYNGPCGTNLNHGVTVVGYGQEAAAGDRYWIVKNSW 339

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  WG+ GYIRM ++      G+CGI ++ SYP+
Sbjct: 340 GQGWGDDGYIRMKKDVAGKPEGLCGIAIRPSYPL 373


>gi|121308860|dbj|BAF43527.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 140/306 (45%), Positives = 184/306 (60%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE+WL ++S+ Y S DE   RF I+  N+++ID  N +  ++ L  N+FADL++EEF   
Sbjct: 49  FESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWLGLNEFADLTHEEFKHK 108

Query: 122 YLGYNKPYNEPRWPSVQYLG------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           +LG+     E +  S +  G      LP SVDWRK+GAV PVK+QGQCG+CWAFS VAAV
Sbjct: 109 FLGFKGELAERKDESSKEFGYRDFVDLPKSVDWRKKGAVAPVKNQGQCGNCWAFSTVAAV 168

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG L  LSEQEL+DCD  + N GCNGG M+ AF ++ +  G+  E++YPY   
Sbjct: 169 EGINQIVTGNLTMLSEQELIDCDT-TFNNGCNGGLMDYAFAYVMR-SGLHKEEEYPYIMS 226

Query: 236 NDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDE 273
              C   K     VTI+GY  +P                      +   FQ YS GVFD 
Sbjct: 227 EGTCDEKKDVSEKVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDFQFYSGGVFDG 286

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           +CG +L+HGV  VGYG   G  Y +V+NSWG  WGE GYIRM R S   + G+CG+ M A
Sbjct: 287 HCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRGSGKPH-GMCGLYMMA 345

Query: 334 SYPVKR 339
           SYP K+
Sbjct: 346 SYPTKQ 351


>gi|238007404|gb|ACR34737.1| unknown [Zea mays]
 gi|413943289|gb|AFW75938.1| cysteine proteinase Mir2 [Zea mays]
          Length = 484

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 140/297 (47%), Positives = 182/297 (61%), Gaps = 36/297 (12%)

Query: 76  EDEWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEFISTYLGYNKPYN- 130
           ED+  RR  ++  N++YID  N++  +    F+L   +FADL+ EE+ +  L  ++  N 
Sbjct: 77  EDDDARRLEVFRYNLRYIDAHNAEADAGLHGFRLGLTRFADLTLEEYRARLLLGSRGRNG 136

Query: 131 -------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
                    R+  +    LP +VDWR+ GAV  VKDQGQCG+CWAFSAVAAVEGINK+ T
Sbjct: 137 TAVGVVGSRRYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGACWAFSAVAAVEGINKIVT 196

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G L+SLSEQEL+DCD   ++QGC+GG M+ AF F+ K GG+ TE DYP+ G +  C    
Sbjct: 197 GSLISLSEQELIDCD-KFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKL 255

Query: 244 TKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNH 281
                V+I  +E +P                      +R AFQLYS G+FD  CG  L+H
Sbjct: 256 KNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDH 315

Query: 282 GVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GVTVVGYG + G+ YW+VKNSWGT WGEAGY+RMARN      G CGI M+  YPVK
Sbjct: 316 GVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNV-RVRAGKCGIAMEPLYPVK 371


>gi|359491865|ref|XP_002273243.2| PREDICTED: xylem cysteine proteinase 1-like [Vitis vinifera]
          Length = 351

 Score =  259 bits (663), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 142/308 (46%), Positives = 182/308 (59%), Gaps = 29/308 (9%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           + + FE+W+ ++ + Y S +E   RF ++  N+++ID  N +  S+ L  N+FADLS+EE
Sbjct: 44  LTDLFESWMSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEE 103

Query: 118 FISTYLGYN----KPYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           F   YLG      K  + P   S + +  LP SVDWRK+GAV  VK+QG CGSCWAFS V
Sbjct: 104 FKRKYLGLKIELPKRRDSPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTV 163

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEGIN++ TG L +LSEQEL+DCD    N GCNGG M+ AF FI   GG+  E+DYPY
Sbjct: 164 AAVEGINQIVTGNLTALSEQELIDCD-KPFNNGCNGGLMDYAFAFIISNGGLRKEEDYPY 222

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGV 270
             +   C   K +   VTI+GY  +P                      +   FQ YS G+
Sbjct: 223 VMEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGI 282

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F+ +CG +L+HGV  VGYG   G  Y  VKNSWG+ WGE GYIRM RN      GICGI 
Sbjct: 283 FNGHCGTELDHGVAAVGYGTSKGVDYITVKNSWGSKWGEKGYIRMKRNVGKPE-GICGIY 341

Query: 331 MQASYPVK 338
             ASYP K
Sbjct: 342 KMASYPTK 349


>gi|359359166|gb|AEV41071.1| putative oryzain beta chain precursor [Oryza minuta]
          Length = 464

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/306 (46%), Positives = 191/306 (62%), Gaps = 31/306 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEFI 119
           ++ WL +  R Y +  E +RRF ++  N+++ D  N++  +  F+L  N+FADL+NEEF 
Sbjct: 53  YDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFADLTNEEFR 112

Query: 120 STYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           +T+LG  K     R    +Y       LP SVDWR++GAV PVK+QGQCGSCWAFSAV+ 
Sbjct: 113 ATFLGA-KVVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVST 171

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VE IN+L TG++++LSEQELV+C  N +N GCNGG M+ AF+FI K GG+ TEDDYPY+ 
Sbjct: 172 VESINQLVTGEMITLSEQELVECSTNGQNGGCNGGLMDDAFDFIIKNGGIDTEDDYPYKA 231

Query: 235 KNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD 272
            + +C  ++     V+I G+E +P                          FQLY  GVF 
Sbjct: 232 VDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFS 291

Query: 273 EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
             CG  L+HGV  VGYG D+G+ YW+V+NSWG  WGE+GY+RM RN  +   G CGI M 
Sbjct: 292 GRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNI-NVTTGKCGIAMM 350

Query: 333 ASYPVK 338
           ASYP K
Sbjct: 351 ASYPTK 356


>gi|356515080|ref|XP_003526229.1| PREDICTED: vignain-like [Glycine max]
          Length = 284

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 176/278 (63%), Gaps = 30/278 (10%)

Query: 89  NVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGYN--KPYNEPRWPSVQYLG---L 142
           NV YI+ + N+ N  +KL  N+FADL++EEFI     +N    ++  R  + +Y     L
Sbjct: 7   NVNYIEAFNNAANKPYKLGINQFADLTSEEFIVPRNRFNGHMRFSNTRTTTFKYENVTVL 66

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P S+DWR++GAVTP+K+QG CG CWAFSA+AA EGI+K+ TGKLVSLSEQE+VDCD    
Sbjct: 67  PDSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSEQEVVDCDTKGT 126

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           + GC GGYM+ AF+FI +  G+ TE  YPY+G + +C   +   HA TITGYE +P    
Sbjct: 127 DHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGKCNIKEEAVHATTITGYEDVPINNE 186

Query: 259 -----------------ARYA-FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLV 299
                            AR A FQ Y  G+F   CG +L+HGVT VGYGE++ G KYWLV
Sbjct: 187 KALQKAVANQPVSVAIDARGADFQFYKSGIFTGSCGTELDHGVTAVGYGENNEGTKYWLV 246

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGT WGE GY  M R   +   GICGI M ASYP 
Sbjct: 247 KNSWGTEWGEEGYTMMQRGVKAVE-GICGIAMLASYPT 283


>gi|242092700|ref|XP_002436840.1| hypothetical protein SORBIDRAFT_10g009830 [Sorghum bicolor]
 gi|241915063|gb|EER88207.1| hypothetical protein SORBIDRAFT_10g009830 [Sorghum bicolor]
          Length = 328

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/315 (44%), Positives = 188/315 (59%), Gaps = 45/315 (14%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           D  +M  R E W+ QYSR Y    E  RRF ++ +NV++I+  N+  N  F L  N+FAD
Sbjct: 29  DDSAMVARHEQWMVQYSRVYKDTTEKARRFEVFKANVKFIESFNAGGNRKFWLGVNQFAD 88

Query: 113 LSNEEFISTYL--GYN-KPYNEP---RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           L+N+EF +T    G+   P   P   R+ +V    LPA++DWR +GAVTP+KDQGQC   
Sbjct: 89  LTNDEFRATKTNKGFKPSPVKVPTGFRYENVSVDALPATIDWRTKGAVTPIKDQGQC--- 145

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
                    EGI K+ TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TT
Sbjct: 146 ---------EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFQFIIKNGGLTT 196

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E  YPY   + +C++    + A T+ G+E +PA                         FQ
Sbjct: 197 ESSYPYTAADGKCKSG--SNSAATVKGFEDVPANDEAALMKAVANQPVSVAVDGGDMTFQ 254

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S  
Sbjct: 255 FYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGENGYLRMEKD-ISDK 313

Query: 324 IGICGILMQASYPVK 338
            G+CG+ M+ SYP++
Sbjct: 314 RGMCGLAMEPSYPIE 328


>gi|147772785|emb|CAN62838.1| hypothetical protein VITISV_003391 [Vitis vinifera]
          Length = 298

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/332 (43%), Positives = 183/332 (55%), Gaps = 68/332 (20%)

Query: 30  LSLFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +S+ LL++L     AW S+   +     SM ER E+W+ +Y R Y   +E ++RF I+  
Sbjct: 10  VSMALLFILA----AWASQATSRSLHEASMYERHEDWMARYGRMYKDANEKEKRFKIFKD 65

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDW 148
           NV       +Q  +FK  +                                  +P+++DW
Sbjct: 66  NV-------AQATTFKYEN-------------------------------VTAVPSTIDW 87

Query: 149 RKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG 208
           RK+GAVTP+KDQ QCGSCWAFSAVAA EGI ++ TGKL+SLSEQELVDCD   ENQGC+G
Sbjct: 88  RKKGAVTPIKDQQQCGSCWAFSAVAATEGITQITTGKLISLSEQELVDCDTGGENQGCSG 147

Query: 209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------- 260
           G  + AF FI  I G+ +E  YPY G +  C + K  H A  I GYE +PA         
Sbjct: 148 GLXDDAFRFIX-IHGLASEATYPYEGDDGTCNSKKEAHPAAKIKGYEDVPANNEKALQKA 206

Query: 261 --------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGT 305
                         + FQ Y+ GVF   CG +L+HGV  VGYG  D G  YWLVKNSWGT
Sbjct: 207 VAHQPVAVAIDAGGFEFQFYTSGVFTGQCGTELDHGVAAVGYGIGDDGMXYWLVKNSWGT 266

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            WGE GYIRM R+  +   G+CGI MQASYP 
Sbjct: 267 GWGEEGYIRMQRDVTAKE-GLCGIAMQASYPT 297


>gi|226503205|ref|NP_001150062.1| thiol protease SEN102 precursor [Zea mays]
 gi|195636390|gb|ACG37663.1| thiol protease SEN102 precursor [Zea mays]
          Length = 349

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/317 (45%), Positives = 188/317 (59%), Gaps = 42/317 (13%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +RF+ W  +Y+R Y + +E+Q+RF +YS NV++I+ +N    S++L +N+FADL+ EEF 
Sbjct: 35  DRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMNQPGSSYELGENRFADLTEEEFK 94

Query: 120 STYLGYNKPYNEPRWPSVQYLGL-----------------PASVDWRKEGAVTPVKDQGQ 162
            TYL   K  N    P    L +                 P SVDWR +GAVTPVK Q  
Sbjct: 95  DTYL--MKLDNVASSPEAMALTVDTMNRAGTSGGSNTNEAPNSVDWRTKGAVTPVKSQQH 152

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAF+AVA++EG++K+KTG LVSLSEQE+VDCD    N GC+GG+   A E++T+ G
Sbjct: 153 CGSCWAFAAVASIEGVHKIKTGLLVSLSEQEIVDCDRGGNNHGCHGGHSSSAMEWVTRNG 212

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA---------------------IPARY 261
           G+TTE DYPY G+  +C +DK  HHA  I G +A                     I A  
Sbjct: 213 GLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGALQHAVAGRPVAVSINASR 272

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AFQ Y  G+F   C    NH VTVVGYG +  G KYW+VKNSWG  WGE GY+RM R   
Sbjct: 273 AFQFYKRGIFSGPCNTTRNHAVTVVGYGANASGHKYWIVKNSWGERWGEKGYVRMQRGVR 332

Query: 321 SSNIGICGILMQASYPV 337
           +   G+CGI +   Y V
Sbjct: 333 ARE-GVCGIAIAPFYAV 348


>gi|226505708|ref|NP_001141813.1| uncharacterized protein LOC100273952 precursor [Zea mays]
 gi|194706024|gb|ACF87096.1| unknown [Zea mays]
 gi|413945958|gb|AFW78607.1| hypothetical protein ZEAMMB73_489507 [Zea mays]
          Length = 460

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 186/328 (56%), Gaps = 45/328 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL------------ 101
           DP ++E +F+ W  ++ + Y + +E   R  +++ N  ++   N++              
Sbjct: 28  DPPAIEAQFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARAGANAAGGGGGGAA 87

Query: 102 --SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR-------WPSVQYLGLPASVDWRKEG 152
             S+ L  N FADL++EEF +  LG   P    R       W       +P ++DWRK G
Sbjct: 88  PPSYTLALNAFADLTHEEFRAARLGRIAPGAALRSRAAPVYWGLGGGAAVPDALDWRKSG 147

Query: 153 AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYME 212
           AVT VKDQG CG+CW+FSA  A+EGINK+KTG LVSLSEQEL+DCD  S N GC GG M+
Sbjct: 148 AVTKVKDQGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCD-RSYNSGCGGGLMD 206

Query: 213 KAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------ 260
            A++F+ K GG+ TE+DYPYR  +  C  +K K   VTI GY  +P+             
Sbjct: 207 YAYKFVIKNGGIDTEEDYPYREADGTCNKNKLKKRVVTIDGYTDVPSNKEDLLLQAVAQQ 266

Query: 261 ----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEA 310
                      AFQLY  G+FD  C   L+H V +VGYG + G+ YW+VKNSWG SWG  
Sbjct: 267 PVSVGICGSARAFQLYYQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGESWGMK 326

Query: 311 GYIRMARNSPSSNIGICGILMQASYPVK 338
           GY+ M RN+  S  G+CGI M AS+P K
Sbjct: 327 GYMHMHRNTGDSK-GVCGINMMASFPTK 353


>gi|384253406|gb|EIE26881.1| hypothetical protein COCSUDRAFT_21961 [Coccomyxa subellipsoidea
           C-169]
          Length = 481

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/306 (44%), Positives = 187/306 (61%), Gaps = 32/306 (10%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           F +W++   + Y    +E++R+F ++  N++++   N ++ +FKL    FADL+++E+  
Sbjct: 48  FSDWVEHLQKAYKDNVEEYERKFSVWLDNLEFVHSHNEKDSTFKLGLTNFADLTHDEYRQ 107

Query: 121 TYLGYNKPYNEPRWPSVQYLGL-------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
             LGY          + +  G        P S+DWRK+GAVT VK+Q QCGSCWAFS   
Sbjct: 108 HALGYRPELKGTGLGTGKSTGFQYADYEAPPSIDWRKKGAVTDVKNQQQCGSCWAFSTTG 167

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           +VEG N + +G+LVSLSEQELVDCDV +++ GC+GG M+ AF FI + GG+ TE DY Y+
Sbjct: 168 SVEGANAIYSGELVSLSEQELVDCDV-TQDHGCHGGLMDFAFSFIIRNGGIDTEKDYKYK 226

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGVF 271
            ++  C   K K H VTI  YE +P                       +  FQLY+ GVF
Sbjct: 227 AQDGVCNIAKEKRHVVTIDSYEDVPPNDESALKKAAANQPISVAIEADQREFQLYAGGVF 286

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
           D  CG  L+HGV VVGYG D+G  YW+VKNSWG  WG++GYIR+AR   S++ G CGI M
Sbjct: 287 DAPCGTALDHGVLVVGYGSDNGTDYWIVKNSWGDFWGDSGYIRLARGI-SNSAGQCGIAM 345

Query: 332 QASYPV 337
           QASYP+
Sbjct: 346 QASYPI 351


>gi|296090463|emb|CBI40282.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 132/299 (44%), Positives = 180/299 (60%), Gaps = 48/299 (16%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E WL ++ + Y +  E +RRF I+  N+++I+  N+ N ++K+ D +++  + E+    
Sbjct: 4   YEAWLVKHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGD-RYSFRAGED---- 58

Query: 122 YLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
                               LP SVDWR++GAV PVKDQG CGSCWAFS +AAVEGIN++
Sbjct: 59  --------------------LPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGINQI 98

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
            TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI   GG+ +E+DYPYR  +  C  
Sbjct: 99  ATGDLISLSEQELVDCD-KSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTTCDP 157

Query: 242 DKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQL 279
           ++     V+I GYE +P                         AFQLY  GVF   CG QL
Sbjct: 158 NRKNARVVSIDGYEDVPQNDERSLKKAVANQPVSVAIEAGGRAFQLYQSGVFTGQCGTQL 217

Query: 280 NHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +HGV  VGYG ++   YW+V+NSWG +WGE+GYI++ RN   +  G CGI ++ SYP+K
Sbjct: 218 DHGVVAVGYGTENSVDYWIVRNSWGPNWGESGYIKLERNLAGTETGKCGIAIEPSYPIK 276


>gi|2342494|dbj|BAA21848.1| bromelain [Ananas comosus]
 gi|2463582|dbj|BAA22543.1| FB31 precursor [Ananas comosus]
          Length = 352

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/347 (43%), Positives = 204/347 (58%), Gaps = 41/347 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   ++   L LFL  +   P+ A  +   +  DP  M +RFE W+ +Y R Y   DE  
Sbjct: 1   MASKVQLVFLFLFLCVMWASPSAASRD---EPSDP--MMKRFEEWMAEYGRVYKDNDEKM 55

Query: 81  RRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPSVQ 138
           RRF I+ +NV +I+  N++N  S+ L  NKF D++N EF++ Y G  ++P N  + P V 
Sbjct: 56  RRFQIFKNNVNHIETFNNRNGNSYTLGINKFTDMTNNEFVAQYTGGISRPLNIEKEPVVS 115

Query: 139 Y-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           +       +  S+DWR  GAVT VKDQ  CGSCWAFSA+A VEGI K+ TG LVSLSEQE
Sbjct: 116 FDDVNISAVGQSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGIYKIVTGYLVSLSEQE 175

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           ++DC V++   GC+GG+++ A++FI    GV +E DYPY+     C  +   + A  ITG
Sbjct: 176 VLDCAVSN---GCDGGFVDNAYDFIISNNGVASEADYPYQAYQGDCAANSWPNSAY-ITG 231

Query: 254 YEAIPA------RYA----------------FQLYSHGVFDEYCGHQLNHGVTVVGYGED 291
           Y  + +      +YA                FQ Y+ GVF   CG  LNH +T++GYG+D
Sbjct: 232 YSYVRSNDESSMKYAVWNQPIAAAIDASGDNFQYYNGGVFSGPCGTSLNHAITIIGYGQD 291

Query: 292 -HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             G +YW+VKNSWG+SWGE GYIRMAR   SS  G+CGI M   YP 
Sbjct: 292 SSGTQYWIVKNSWGSSWGERGYIRMARGVSSS--GLCGIAMDPLYPT 336


>gi|357143305|ref|XP_003572875.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 473

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/352 (42%), Positives = 205/352 (58%), Gaps = 40/352 (11%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSE--------GYPQK--YDPQSMEERFENWLKQYSREY 73
           M   + LSLF L  LG  A + S         GY Q+    P  + + F +W  ++S+ Y
Sbjct: 1   MAMGSKLSLFFL-SLGFVAYSSSASHNDPSVVGYSQEDLALPYKLVDLFSSWSVKHSKIY 59

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP- 132
            S +E  +R+ ++  N+++I   N +N S+ L  N+FAD+++EEF STYLG     + P 
Sbjct: 60  VSPEEKVKRYEVFKQNLKHIVETNRRNGSYWLGLNQFADVAHEEFKSTYLGLKTGMDGPA 119

Query: 133 RWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           R P+       + LP SVDWRK+GAVTPVK+QG+CGSCWAFS VAAVEGIN++ TGKL S
Sbjct: 120 RAPTAFRYENSVNLPWSVDWRKKGAVTPVKNQGECGSCWAFSTVAAVEGINQIATGKLES 179

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQEL+DCD   ++ GC GG+M+ AF +I    G+ T+DDYPY  +   C+  + +   
Sbjct: 180 LSEQELMDCDTTFDH-GCGGGFMDFAFAYIMGNLGIHTDDDYPYLMEEGYCKEKQPQSKV 238

Query: 249 VTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVV 286
           VTI+GYE +P                          FQ Y  GVF+  CG +L+H +T V
Sbjct: 239 VTISGYEDVPENSEVSLLKALAHQPISVGIAAGSKDFQFYKRGVFEGSCGTELDHALTAV 298

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GYG   G+ Y ++KNSWG SWGE GY R+ R +     G+C I   ASYP K
Sbjct: 299 GYGSSDGQDYIIMKNSWGKSWGEQGYFRIKRGTGKPE-GVCSIYSMASYPTK 349


>gi|3451077|emb|CAA20473.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7269200|emb|CAB79307.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/343 (40%), Positives = 201/343 (58%), Gaps = 35/343 (10%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER---FENWLKQYSREYGSE-DEWQRRF 83
            +L L +++VL  P+ A           +S EE    F+ W+ ++ + Y +   E +RRF
Sbjct: 10  TILFLLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTNALGEKERRF 69

Query: 84  GIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL- 142
             +  N+++ID  N++NLS++L   +FADL+ +E+   + G  KP       S +Y+ L 
Sbjct: 70  QNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRDLFPGSPKPKQRNLKTSRRYVPLA 129

Query: 143 ----PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
               P SVDWR+EGAV+ +KDQG C SCWAFS VAAVEG+NK+ TG+L+SLSEQELVDC 
Sbjct: 130 GDQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGELISLSEQELVDC- 188

Query: 199 VNSENQGCNG-GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
            N  N GC G G M+ AF+F+    G+ +E DYPY+G    C   +     +TI  YE +
Sbjct: 189 -NLVNNGCYGSGLMDTAFQFLINNNGLDSEKDYPYQGTQGSCNRKQVHLLVITIDSYEDV 247

Query: 258 PAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
           PA                         F LY   +++  CG  L+H + +VGYG ++G+ 
Sbjct: 248 PANDEISLQKAVAHQPVSVGVDKKSQEFMLYRSCIYNGPCGTNLDHALVIVGYGSENGQD 307

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YW+V+NSWGT+WG+AGYI++ARN      G+CGI M ASYP+K
Sbjct: 308 YWIVRNSWGTTWGDAGYIKIARNFEDPK-GLCGIAMLASYPIK 349


>gi|297744465|emb|CBI37727.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/300 (47%), Positives = 177/300 (59%), Gaps = 40/300 (13%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           RFE+W+ ++ + Y S +E   RF ++  N+ +ID  N +  S+ L  N+FADLS+EEF S
Sbjct: 48  RFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVSSYWLGLNEFADLSHEEFKS 107

Query: 121 TYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
             +                  LP SVDWRK+GAVT VK+QG CGSCWAFS VAAVEGIN+
Sbjct: 108 KDVA----------------DLPESVDWRKKGAVTHVKNQGACGSCWAFSTVAAVEGINQ 151

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 240
           + TG L +LSEQEL+DCD  + N GCNGG M+ AF FI   GG+  EDDYPY  +   C+
Sbjct: 152 IVTGNLTTLSEQELIDCDT-TFNSGCNGGLMDYAFAFIASNGGLHKEDDYPYLMEEGTCE 210

Query: 241 TDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQ 278
             K     VTI+GYE +P +                        FQ YS GVF+  CG +
Sbjct: 211 EQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEASGRDFQFYSGGVFNGPCGTE 270

Query: 279 LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           L+HGV  VGYG   G  Y +VKNSWG  WGE GYIRM RN+  +  G+CGI   ASYP K
Sbjct: 271 LDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKTE-GLCGINKMASYPTK 329


>gi|413951605|gb|AFW84254.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 423

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 144/316 (45%), Positives = 180/316 (56%), Gaps = 44/316 (13%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           +E W + + R +    E  RRFG +  NV++I   N + +  ++L  N+F D+  EEF S
Sbjct: 88  YERW-QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRS 146

Query: 121 TYLGYN----KPYNEPRWPSVQYLGL--------PASVDWRKEGAVTPVKDQGQCGSCWA 168
           T+        +  + P   +    G         P SVDWR+EGAVT VKDQG CGSCWA
Sbjct: 147 TFADSRINDLRRQDSPAARAGAVPGFMYDSAADPPRSVDWRQEGAVTGVKDQGHCGSCWA 206

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS V AVEGIN ++TG L SLSEQEL+DCD  ++  GC GG ME AFEFI   GG+TTE 
Sbjct: 207 FSTVVAVEGINAIRTGSLASLSEQELIDCD--TDENGCQGGLMENAFEFIKSFGGITTEA 264

Query: 229 DYPYRGKNDRCQTDKTKH---HAVTITGYEAIPA----------------------RYAF 263
            YPYR  N  C  D+ +      V I G++ +PA                        AF
Sbjct: 265 AYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQPVSVAVDAGGQAF 324

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q YS GVF   CG  L+HGV  VGYG  D G  YW+VKNSWGTSWGE GYIRM R   + 
Sbjct: 325 QFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGEGGYIRMQRG--AG 382

Query: 323 NIGICGILMQASYPVK 338
           N G+CGI M+AS+P+K
Sbjct: 383 NGGLCGIAMEASFPIK 398


>gi|115477767|ref|NP_001062479.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|42407937|dbj|BAD09076.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113624448|dbj|BAF24393.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|125562525|gb|EAZ07973.1| hypothetical protein OsI_30231 [Oryza sativa Indica Group]
 gi|215701458|dbj|BAG92882.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 385

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 185/317 (58%), Gaps = 38/317 (11%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +++ E +E W  Q+  +R+ G   E  RRF ++  NV+ I   N ++  +KL  N+F D+
Sbjct: 42  EALWELYERWRGQHRVARDLG---EKARRFNVFKDNVRLIHEFNRRDEPYKLRLNRFGDM 98

Query: 114 SNEEFISTYLGYNKPYNE------PRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCG 164
           + +EF   Y      ++        R     Y G   LPA+VDWR++GAV  VKDQGQCG
Sbjct: 99  TADEFRRAYASSRVSHHRMFRGRGERRSGFMYAGARDLPAAVDWREKGAVGAVKDQGQCG 158

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS +AAVEGIN ++T  L +LSEQ+LVDCD  + N GC+GG M+ AF++I K GGV
Sbjct: 159 SCWAFSTIAAVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQYIAKHGGV 218

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA---------------------- 262
                YPYR +   C++      AVTI GYE +PA                         
Sbjct: 219 AASSAYPYRARQSSCKSSAASSPAVTIDGYEDVPANSESALKKAVANQPVSVAIEAGGSH 278

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GVF   CG +L+HGV  VGYG    G KYW+V+NSWG  WGE GYIRM R+  S
Sbjct: 279 FQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVRNSWGADWGEKGYIRMKRDV-S 337

Query: 322 SNIGICGILMQASYPVK 338
           +  G+CGI M+ASYP+K
Sbjct: 338 AKEGLCGIAMEASYPIK 354


>gi|413951606|gb|AFW84255.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 379

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/318 (45%), Positives = 183/318 (57%), Gaps = 48/318 (15%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           +E W + + R +    E  RRFG +  NV++I   N + +  ++L  N+F D+  EEF S
Sbjct: 44  YERW-QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRS 102

Query: 121 TYLGYNKPYNEPRW---PSVQYLGLPA-----------SVDWRKEGAVTPVKDQGQCGSC 166
           T+   +   N+ R    P+ +   +P            SVDWR+EGAVT VKDQG CGSC
Sbjct: 103 TFA--DSRINDLRRQDSPAARAGAVPGFMYDSAADPPRSVDWRQEGAVTGVKDQGHCGSC 160

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN ++TG L SLSEQEL+DCD  ++  GC GG ME AFEFI   GG+TT
Sbjct: 161 WAFSTVVAVEGINAIRTGSLASLSEQELIDCD--TDENGCQGGLMENAFEFIKSFGGITT 218

Query: 227 EDDYPYRGKNDRCQTDKTKH---HAVTITGYEAIPA----------------------RY 261
           E  YPYR  N  C  D+ +      V I G++ +PA                        
Sbjct: 219 EAAYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQPVSVAVDAGGQ 278

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AFQ YS GVF   CG  L+HGV  VGYG  D G  YW+VKNSWGTSWGE GYIRM R   
Sbjct: 279 AFQFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGEGGYIRMQRG-- 336

Query: 321 SSNIGICGILMQASYPVK 338
           + N G+CGI M+AS+P+K
Sbjct: 337 AGNGGLCGIAMEASFPIK 354


>gi|2463584|dbj|BAA22544.1| FBSB precursor [Ananas comosus]
          Length = 356

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 147/337 (43%), Positives = 198/337 (58%), Gaps = 39/337 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L LFL  +   P+ A ++   +  DP  M +RFE W+ +Y R Y   DE  RRF I+ +N
Sbjct: 10  LFLFLCVMWASPSAASAD---EPSDP--MMKRFEEWMVEYGRVYKDNDEKMRRFQIFKNN 64

Query: 90  VQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPSVQY-----LGL 142
           V +I+  NS+N  S+ L  N+F D++N EFI+ Y G  ++P N  R P V +       +
Sbjct: 65  VNHIETFNSRNENSYTLGINQFTDMTNNEFIAQYTGGISRPLNIEREPVVSFDDVDISAV 124

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P S+DWR  GAVT VK+Q  CG+CWAF+A+A VE I K+K G L  LSEQ+++DC   ++
Sbjct: 125 PQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC---AK 181

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
             GC GG+  +AFEFI    GV +   YPY+     C+T+   + A  ITGY  +P    
Sbjct: 182 GYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTNGVPNSAY-ITGYARVPRNNE 240

Query: 259 -----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVK 300
                            A   FQ Y  GVF+  CG  LNH VT +GYG+D +G+KYW+VK
Sbjct: 241 SSMMYAVSKQPITVAVDANANFQYYKSGVFNGPCGTSLNHAVTAIGYGQDSNGKKYWIVK 300

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWG  WGEAGYIRMAR+  SS+ GICGI + + YP 
Sbjct: 301 NSWGARWGEAGYIRMARDVSSSS-GICGIAIDSLYPT 336


>gi|42567068|ref|NP_567686.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332659371|gb|AEE84771.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 356

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 203/344 (59%), Gaps = 36/344 (10%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER---FENWLKQYSREYGSE-DEWQRRF 83
            +L L +++VL  P+ A           +S EE    F+ W+ ++ + Y +   E +RRF
Sbjct: 10  TILFLLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTNALGEKERRF 69

Query: 84  GIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL- 142
             +  N+++ID  N++NLS++L   +FADL+ +E+   + G  KP       S +Y+ L 
Sbjct: 70  QNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRDLFPGSPKPKQRNLKTSRRYVPLA 129

Query: 143 ----PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
               P SVDWR+EGAV+ +KDQG C SCWAFS VAAVEG+NK+ TG+L+SLSEQELVDC 
Sbjct: 130 GDQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGELISLSEQELVDC- 188

Query: 199 VNSENQGCNG-GYMEKAFEFITKIGGVTTEDDYPYRGKNDRC-QTDKTKHHAVTITGYEA 256
            N  N GC G G M+ AF+F+    G+ +E DYPY+G    C +   T +  +TI  YE 
Sbjct: 189 -NLVNNGCYGSGLMDTAFQFLINNNGLDSEKDYPYQGTQGSCNRKQSTSNKVITIDSYED 247

Query: 257 IPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +PA                         F LY   +++  CG  L+H + +VGYG ++G+
Sbjct: 248 VPANDEISLQKAVAHQPVSVGVDKKSQEFMLYRSCIYNGPCGTNLDHALVIVGYGSENGQ 307

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            YW+V+NSWGT+WG+AGYI++ARN      G+CGI M ASYP+K
Sbjct: 308 DYWIVRNSWGTTWGDAGYIKIARNFEDPK-GLCGIAMLASYPIK 350


>gi|109119897|dbj|BAE96008.1| cysteine proteinase [Triticum aestivum]
          Length = 377

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/300 (47%), Positives = 180/300 (60%), Gaps = 41/300 (13%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLG-------YNKPY 129
           E  RRFG + SNV +I   N + +  ++L  N+F D+S  EF +T+ G        + P 
Sbjct: 61  EKHRRFGTFKSNVHFIHSHNKRGDRPYRLRLNRFGDMSQAEFRATFAGSRVSDRRRDGPA 120

Query: 130 NEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTG 184
             P  P   Y       LP SVDWR++GAVT VK+QG+CGSCWAFS V +VEGIN ++TG
Sbjct: 121 TPPSVPGFMYAAVNVSDLPRSVDWRQKGAVTGVKNQGKCGSCWAFSTVVSVEGINAIRTG 180

Query: 185 KLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 244
           KLVSLSEQEL+DCD  ++N GC GG M+ AFE+I K GG+TTE  YPYR  N  C+  K 
Sbjct: 181 KLVSLSEQELIDCDT-ADNDGCEGGLMDNAFEYIKKNGGLTTEAAYPYRAANGTCKAAKV 239

Query: 245 KHHA---VTITGYEAIPARY----------------------AFQLYSHGVFDEYCGHQL 279
              +   V I G++ +PA                        AF  YS GVF   CG +L
Sbjct: 240 AKSSPMVVHIDGHQDVPANSEEALAKAVANQPVSVGIDASGKAFMFYSEGVFTGECGTEL 299

Query: 280 NHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +HGV VVGYG  + G+ YW VKNSWG SWGE GYIR+ ++S +   G+CGI M+ASY VK
Sbjct: 300 DHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEKGYIRVEKDSGAEG-GLCGIAMEASYAVK 358


>gi|194701748|gb|ACF84958.1| unknown [Zea mays]
 gi|414589103|tpg|DAA39674.1| TPA: thiol protease SEN102 [Zea mays]
          Length = 374

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/335 (42%), Positives = 192/335 (57%), Gaps = 54/335 (16%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNK 109
           D  SM ERF+ W   Y++ Y +  E +RRF + + N+ YI+  N++     L+++L +  
Sbjct: 42  DDSSMIERFQRWKAAYNKSYATVAEERRRFRVCARNMAYIEATNAEAEAAGLTYELGETA 101

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSV-------------------QYLGL----PASV 146
           + DL+N+EF++ Y     P   P   SV                    Y+ L    PASV
Sbjct: 102 YTDLTNQEFMAMYTA-PAPAQLPADESVITTRAGPVDAVGGAPGQLPVYVNLSTSAPASV 160

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR  GAVTPVK+QG+CGSCWAFS VA VEGI +++TGKLVSLSEQELVDCD  + + GC
Sbjct: 161 DWRASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQELVDCD--TLDDGC 218

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA---- 262
           +GG   +A  +I   GG+TTE DYPY G  D C   K  H+AV+I G   +  R      
Sbjct: 219 DGGISYRALRWIASNGGITTETDYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSEASLA 278

Query: 263 ------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH--GEKYWLVKNS 302
                             FQ Y  GV++  CG  LNHGVTVVGYG++   G++YW+VKNS
Sbjct: 279 NAVAGQPVAVSIEAGGDNFQHYKKGVYNGPCGTNLNHGVTVVGYGQEAAGGDRYWIVKNS 338

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           WG  WG+ GYIRM ++      G+CGI ++ SYP+
Sbjct: 339 WGQGWGDDGYIRMKKDVAGKPEGLCGIAIRPSYPL 373


>gi|414879123|tpg|DAA56254.1| TPA: hypothetical protein ZEAMMB73_708930 [Zea mays]
          Length = 368

 Score =  256 bits (655), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 178/311 (57%), Gaps = 39/311 (12%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           +E W + + R +    E  RRFG +  N ++I   N + +  ++L  N+F D+  EEF S
Sbjct: 42  YERW-QTHHRVHRHHGEKGRRFGTFKENARFIHAHNKRGDRPYRLRLNRFGDMGREEFRS 100

Query: 121 TYLG------YNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            +          +P   P  P   Y     LP SVDWR++GAVT VK+QG+CGSCWAFS 
Sbjct: 101 GFADSRINDLRREPTAAPAVPGFMYDDATDLPRSVDWRQKGAVTAVKNQGRCGSCWAFST 160

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           V AVEGIN ++TG LVSLSEQEL+DCD  ++  GC GG ME AFEFI   GG+TTE  YP
Sbjct: 161 VVAVEGINAIRTGSLVSLSEQELIDCD--TDENGCQGGLMENAFEFIKSHGGITTESAYP 218

Query: 232 YRGKNDRCQTDKTKH-HAVTITGYEAIPA----------------------RYAFQLYSH 268
           Y   N  C   + +    V I G++A+PA                        A Q YS 
Sbjct: 219 YHASNGTCDGARARRGRVVAIDGHQAVPAGSEDALAKAVAHQPVSVAIDAGGQALQFYSE 278

Query: 269 GVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GVF   CG  L+HGV  VGYG  D G  YW+VKNSWG SWGE GYIRM R   + N G+C
Sbjct: 279 GVFTGDCGTDLDHGVAAVGYGVSDDGTPYWIVKNSWGPSWGEGGYIRMQRG--TGNGGLC 336

Query: 328 GILMQASYPVK 338
           GI M+AS+P+K
Sbjct: 337 GIAMEASFPIK 347


>gi|242092702|ref|XP_002436841.1| hypothetical protein SORBIDRAFT_10g009840 [Sorghum bicolor]
 gi|241915064|gb|EER88208.1| hypothetical protein SORBIDRAFT_10g009840 [Sorghum bicolor]
          Length = 328

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 186/317 (58%), Gaps = 49/317 (15%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           D  +M  R E W+ QYSR Y    E  RRF ++ +NV++I+  N+  N  F L  N+FAD
Sbjct: 29  DDSAMVARHEQWMVQYSRVYKDTTEKARRFEVFKANVKFIESFNAGGNRKFWLGVNQFAD 88

Query: 113 LSNEEFISTYLGYNKPYNEP--------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           L+N+EF +T    NK +           R+ +V    LPA++DWR +GAVTP+KDQGQC 
Sbjct: 89  LTNDEFRATKT--NKGFKPSPVKVSTGFRYENVSVDALPATIDWRTKGAVTPIKDQGQC- 145

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
                      EGI K+ TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+
Sbjct: 146 -----------EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGL 194

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPY   + +C++    + A T+ G+E +PA                         
Sbjct: 195 TTESSYPYTAADGKCKSG--SNSAATVKGFEDVPANDEAALMKAVANQPVSVAVDGGDMT 252

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQ YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S
Sbjct: 253 FQFYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGENGYLRMEKD-IS 311

Query: 322 SNIGICGILMQASYPVK 338
              G+CG+ M+ SYP +
Sbjct: 312 DKRGMCGLAMEPSYPTE 328


>gi|413933049|gb|AFW67600.1| cysteine protease 1 [Zea mays]
          Length = 341

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 134/308 (43%), Positives = 179/308 (58%), Gaps = 34/308 (11%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFI 119
           R E W+ ++ R Y  E E  RR  ++ +N + ID  N+    S +L  N+FADL+ EEF 
Sbjct: 37  RHEKWMAEHGRAYKDEAEKARRLEVFRANAELIDSFNAAGTHSHRLATNRFADLTVEEFR 96

Query: 120 STYLGYNKPYNEP-------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +   G  +P   P       R+ +        SVDWR  GAVT VKDQG CG CWAFSAV
Sbjct: 97  AARTGL-RPRPAPSAGAGRFRYENFSLADAAQSVDWRAMGAVTGVKDQGACGCCWAFSAV 155

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEG+NK++TG+LVSLSEQELVDCDV+  +QGC+GG M+ AF+F+ + GG+ +E  YPY
Sbjct: 156 AAVEGLNKIRTGRLVSLSEQELVDCDVSGVDQGCDGGLMDNAFQFVARRGGLASESGYPY 215

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           +G++  C++      A +I G+E +P                         AF+ Y  GV
Sbjct: 216 QGRDGPCRSSAAAARAASIRGHEDVPRNNEAALAAAVANQPVSVAINGEDMAFRFYDSGV 275

Query: 271 FDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
               CG  LNH +T VGYG  + G +YWL+KNSWG SWGE GY+R+ R       G+CG+
Sbjct: 276 LGGACGTDLNHAITAVGYGTANDGTRYWLMKNSWGASWGEGGYVRIRRGVRGE--GVCGL 333

Query: 330 LMQASYPV 337
               SYPV
Sbjct: 334 AKLPSYPV 341


>gi|326490904|dbj|BAJ90119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 185/328 (56%), Gaps = 39/328 (11%)

Query: 48  GYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI----DYINSQNL-- 101
           G  +       E +FE W  ++ + Y +  E   R   ++ N  ++    D + S     
Sbjct: 25  GRDESVSASDYEAQFEAWCAEHGKAYATPGERAARLAAFAENAAFVAAHNDAVASSGPGG 84

Query: 102 -SFKLTDNKFADLSNEEFISTYLGY----NKPYNEPRWPSVQYLG----LPASVDWRKEG 152
            S+ L  N FADL+++EF +  LG       P   P      + G    +P ++DWR+ G
Sbjct: 85  PSYTLALNAFADLTHDEFRAARLGRLAVGPGPLGAPSPSDGGFEGRVGAVPDALDWRQSG 144

Query: 153 AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYME 212
           AVT VKDQG CG+CW+FSA  A+EGINK+ TG L+SLSEQEL+DCD  S N GC GG M 
Sbjct: 145 AVTKVKDQGSCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCD-RSYNTGCGGGLMT 203

Query: 213 KAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------ 260
            A++F+ K GG+ TEDDYP+R  +  C  +K K H VTI GY+ +P+             
Sbjct: 204 YAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSKEDLLLQAVAQQ 263

Query: 261 ----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEA 310
                      AFQLYS G+FD  C   L+H V +VGYG + G+ YW+VKNSWG  WG  
Sbjct: 264 PISVGICGSARAFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMK 323

Query: 311 GYIRMARNSPSSNIGICGILMQASYPVK 338
           GY+ M RN+ SS+ GICGI M AS+P K
Sbjct: 324 GYMHMHRNTGSSS-GICGINMMASFPTK 350


>gi|357166364|ref|XP_003580686.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 360

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 188/311 (60%), Gaps = 38/311 (12%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEE 117
           +  W  Q+     +E+E   R+  +  N++YID  N+       SF+L  N+FA L+NEE
Sbjct: 43  YAEWTAQHGSPITNEEEG--RYEAFRDNLRYIDEHNAAADAGIHSFRLGLNRFAGLTNEE 100

Query: 118 FISTYLGY---NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ-CGSCWA 168
           + + YLG    +    + R PS +Y       LP SVDWR++GAV  VKDQG+ CGS WA
Sbjct: 101 YRAAYLGLRLRSGAVGDLRKPSARYEAADGEALPESVDWREKGAVGKVKDQGRSCGSAWA 160

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA+AAVE IN++ TG+L+SLSEQEL+DCD  S N GC+GG M+ AFEFI   GG+ T++
Sbjct: 161 FSAIAAVESINQIVTGELISLSEQELMDCDT-SYNAGCDGGLMDDAFEFIISNGGIDTDE 219

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAI--------------PARYA-------FQLYS 267
           DYPY+ +ND C  +K    AVTI  YE +              P   A       FQLY 
Sbjct: 220 DYPYKARNDSCDANKRNRKAVTIDDYEDLRMNEKSLQKAVSNQPVSVAIEAGGRDFQLYK 279

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
            G+F   CG  L+H  T+VGYG ++G  YW+VK S+GTSWGE+GY RM RN   ++ G C
Sbjct: 280 SGIFTGTCGTDLDHATTIVGYGSENGTDYWIVKESYGTSWGESGYARMERNIKETS-GKC 338

Query: 328 GILMQASYPVK 338
           GI M  SYPVK
Sbjct: 339 GIAMLPSYPVK 349


>gi|146215990|gb|ABQ10197.1| actinidin Act4a [Actinidia eriantha]
          Length = 385

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 196/326 (60%), Gaps = 44/326 (13%)

Query: 49  YPQKYDPQSMEE---RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFK 104
           Y +K++ ++ +E    FE+WL +Y + Y +  E +RRF I+  N++++D  N+  N S+K
Sbjct: 32  YGEKWEQRTNDEVIAMFESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYK 91

Query: 105 LTDNKFADLSNEEFISTYLGYNKPYN----------EPRWPSVQYLGLPASVDWRKEGAV 154
           +  N+F+DL++ E+ S YLG    +N          EPR        LP SVDWRK+GAV
Sbjct: 92  VGLNQFSDLTDAEYSSIYLG--TKFNIRMTNVSDRYEPRVGDQ----LPDSVDWRKKGAV 145

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
             VK+QG CGSCW F+++AAVEGINK+ TG L+SLSEQE+VDC     N GCNGG +  A
Sbjct: 146 LGVKNQGNCGSCWTFASIAAVEGINKIVTGNLISLSEQEIVDCQRKYPNNGCNGGTLSGA 205

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------- 260
           ++FI   GG+ TE +YPY G++  C  +K     VTI  YE +P+               
Sbjct: 206 YQFIINNGGINTEANYPYTGRDGVCDQNKKNKKYVTIDRYENVPSNNEKALQKAVAFQPV 265

Query: 261 --------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGY 312
                    AF+ Y  G+F+  CG +++HGVT+VGYG + G+ YW+V+NSWG +WGE+GY
Sbjct: 266 SVVIASNSTAFKSYKSGIFNGPCGPRIDHGVTIVGYGTEGGKDYWIVRNSWGPNWGESGY 325

Query: 313 IRMARNSPSSNIGICGILMQASYPVK 338
           +RM RN   S  G C I     YPVK
Sbjct: 326 VRMQRNVGGS--GKCFIARAPVYPVK 349


>gi|222629922|gb|EEE62054.1| hypothetical protein OsJ_16838 [Oryza sativa Japonica Group]
          Length = 336

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 142/302 (47%), Positives = 176/302 (58%), Gaps = 35/302 (11%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP 128
           Y + Y S +E  RRF ++  N+ +ID IN +  S+ L  N+FADL+++EF +TYLG   P
Sbjct: 36  YRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFKATYLGLTPP 95

Query: 129 ----------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
                       E R+  +    +P  +DWRK+ AVT VK+QGQCGSCWAFS VAAVEGI
Sbjct: 96  PTRSNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQGQCGSCWAFSTVAAVEGI 155

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
           N + TG L SLSEQEL+DC  +  N GCNGG M+ AF +I   GG+ TE+ YPY  +   
Sbjct: 156 NAIVTGNLTSLSEQELIDCSTDG-NNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEGD 214

Query: 239 CQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFDEYCG 276
           C   K     VTI+GYE +PA                         FQ YS GVFD  CG
Sbjct: 215 CDEGKGA-AVVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYSGGVFDGPCG 273

Query: 277 HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            QL+HGVT VGYG   G+ Y +VKNSWG  WGE GYIRM R +     G+CGI   ASYP
Sbjct: 274 EQLDHGVTAVGYGTSKGQDYIIVKNSWGPHWGEKGYIRMKRGTGKGE-GLCGINKMASYP 332

Query: 337 VK 338
            K
Sbjct: 333 TK 334


>gi|195637152|gb|ACG38044.1| vignain precursor [Zea mays]
          Length = 377

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 140/291 (48%), Positives = 174/291 (59%), Gaps = 39/291 (13%)

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG----YNKPYNEPRWPS-- 136
           F ++ +NV+ I   N ++  +KL  N+F D++ +EF   Y G    +++ +   R  S  
Sbjct: 70  FNVFKANVRLIHEFNRRDEPYKLRLNRFGDMTADEFRRHYAGSRVAHHRMFRGDRQGSSA 129

Query: 137 ------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
                      +PASVDWR++GAVT VKDQGQCGSCWAFS +AAVEGIN +KT  L SLS
Sbjct: 130 SASFMYADARDVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIKTKNLTSLS 189

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ+LVDCD  + N GCNGG M+ AF++I K GGV  ED YPYR +   C+  K+    VT
Sbjct: 190 EQQLVDCDTKA-NAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQASCK--KSPAPVVT 246

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I GYE +PA                         FQ YS GVF   CG +L+HGV  VGY
Sbjct: 247 IDGYEDVPANDESALKKAVAHQPVSVAIEASGSHFQFYSEGVFSGRCGTELDHGVAAVGY 306

Query: 289 G-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G    G KYWLVKNSWG  WGE GYIRMAR+  +   G CGI M+ASYPVK
Sbjct: 307 GVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKE-GHCGIAMEASYPVK 356


>gi|413953666|gb|AFW86315.1| hypothetical protein ZEAMMB73_539008 [Zea mays]
          Length = 314

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 176/314 (56%), Gaps = 57/314 (18%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QYSR Y    E  RRF                         KFADL
Sbjct: 29  DDSAMVARHEQWMAQYSRVYKDASEKARRF-------------------------KFADL 63

Query: 114 SNEEF--ISTYLGYN----KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N EF  + T  G+     K     R+ +V    LP ++DWR +G VTP+KDQGQCG C 
Sbjct: 64  TNHEFRSVKTNKGFKSSNMKILTGFRYENVSADALPTTIDWRTKGVVTPIKDQGQCGCCS 123

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA EGI K+ TGKLVSL++QELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 124 AFSAVAATEGIVKISTGKLVSLADQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 183

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
             YPY   + +C +    + A TI GYE +PA                         F+ 
Sbjct: 184 SSYPYTAADGKCNSG--SNSAATIKGYEDVPANDEAALMKAMANQPVSVAVDGGDMTFRF 241

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S   
Sbjct: 242 YSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRMEKD-ISDKR 300

Query: 325 GICGILMQASYPVK 338
           G+CG+ M+ SYP K
Sbjct: 301 GMCGLAMEPSYPTK 314


>gi|226503129|ref|NP_001149806.1| LOC100283433 precursor [Zea mays]
 gi|195634783|gb|ACG36860.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|219884977|gb|ACL52863.1| unknown [Zea mays]
          Length = 377

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/322 (45%), Positives = 190/322 (59%), Gaps = 39/322 (12%)

Query: 53  YDPQSMEER------FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKL 105
           Y P+ + +       FE W+ +Y + YGS +E  RRF ++  N+ +ID  N + + S+ L
Sbjct: 57  YSPEDLTQHDRLVRLFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWL 116

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRW----PSVQYLGLPASVDWRKEGAVTPVKDQ 160
             N FADL+++EF +TYLG   K  +  R+           +PASVDWRK+GAVT VK+Q
Sbjct: 117 GLNAFADLTHDEFKATYLGLLPKRTSGGRFRYGGVGDGGDEVPASVDWRKKGAVTEVKNQ 176

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           GQCGSCWAFS VAAVEGIN++ TG L SLSEQ+LVDC  +  N GC+GG M+ AF FI  
Sbjct: 177 GQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQQLVDCSTDG-NNGCSGGVMDNAFSFIAT 235

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHA--VTITGYEAIPAR------------------ 260
             G+ +E+ YPY  +   C  D+ +     VTI+GYE +PA                   
Sbjct: 236 GAGLRSEEAYPYLMEEGDCD-DRARDGEVLVTISGYEDVPANDEQALVKALAHQPVSVAI 294

Query: 261 ----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
                 FQ YS GVFD  CG +L+HGV  VGYG   G+ Y +VKNSWGT WGE GYIRM 
Sbjct: 295 EASGRHFQFYSGGVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEKGYIRMK 354

Query: 317 RNSPSSNIGICGILMQASYPVK 338
           R +     G+CGI   ASYP K
Sbjct: 355 RGTGKPE-GLCGINKMASYPTK 375


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 189/308 (61%), Gaps = 31/308 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLS 114
            ++ E FE W  ++ + Y S +E   R G+++ N +++ + N+  N S+ L+ N +ADL+
Sbjct: 23  SNVSELFEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLT 82

Query: 115 NEEFISTYLGYNKPYNE-----PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           + EF  + LG++          P+ PS+    +P S+DWRK+GAVT VKDQG CG+CW+F
Sbjct: 83  HHEFKVSRLGFSPALRNFRPVLPQEPSLPR-DVPDSLDWRKKGAVTAVKDQGSCGACWSF 141

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA  A+EGIN++ TG L+SLSEQEL+DCD  S N GC GG M+ A++F+    G+ TE+D
Sbjct: 142 SATGAMEGINQIMTGSLISLSEQELIDCD-RSYNSGCGGGLMDYAYQFVISNHGIDTEND 200

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYS 267
           YPY+ ++  C+ DK + + VTI GY  IP                      +  AFQLYS
Sbjct: 201 YPYQARDGSCRKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQPVSVGICGSERAFQLYS 260

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
            G+F   C   L+H V +VGYG ++G  YW+VKNSWG SWG  GY+ M RNS +S  G+C
Sbjct: 261 KGIFSGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGKSWGMDGYMHMQRNSGNSE-GVC 319

Query: 328 GILMQASY 335
           GI   ASY
Sbjct: 320 GINKLASY 327


>gi|413942348|gb|AFW74997.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 391

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/322 (45%), Positives = 190/322 (59%), Gaps = 39/322 (12%)

Query: 53  YDPQSMEER------FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKL 105
           Y P+ + +       FE W+ +Y + YGS +E  RRF ++  N+ +ID  N + + S+ L
Sbjct: 71  YSPEDLTQHDRLVRLFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWL 130

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRW----PSVQYLGLPASVDWRKEGAVTPVKDQ 160
             N FADL+++EF +TYLG   K  +  R+           +PASVDWRK+GAVT VK+Q
Sbjct: 131 GLNAFADLTHDEFKATYLGLLPKRTSGGRFRYGGVGDGGDEVPASVDWRKKGAVTEVKNQ 190

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           GQCGSCWAFS VAAVEGIN++ TG L SLSEQ+LVDC  +  N GC+GG M+ AF FI  
Sbjct: 191 GQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQQLVDCSTDG-NNGCSGGVMDNAFSFIAT 249

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHA--VTITGYEAIPAR------------------ 260
             G+ +E+ YPY  +   C  D+ +     VTI+GYE +PA                   
Sbjct: 250 GAGLRSEEAYPYLMEEGDCD-DRARDGEVLVTISGYEDVPANDEQALVKALAHQPVSVAI 308

Query: 261 ----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
                 FQ YS GVFD  CG +L+HGV  VGYG   G+ Y +VKNSWGT WGE GYIRM 
Sbjct: 309 EASGRHFQFYSGGVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEKGYIRMK 368

Query: 317 RNSPSSNIGICGILMQASYPVK 338
           R +     G+CGI   ASYP K
Sbjct: 369 RGTGKPE-GLCGINKMASYPTK 389


>gi|125552927|gb|EAY98636.1| hypothetical protein OsI_20560 [Oryza sativa Indica Group]
          Length = 449

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/306 (44%), Positives = 178/306 (58%), Gaps = 31/306 (10%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           E +FE W  ++ R Y +  E   R   ++ N  ++   N    S+ L  N FADL+++EF
Sbjct: 35  EAQFEAWCAEHGRSYATPGERAARLAAFADNAAFVAAHNGAPASYALALNAFADLTHDEF 94

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGL-------PASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            +  LG        R     YLG+       P +VDWR+ GAVT VKDQG CG+CW+FSA
Sbjct: 95  RAARLGRLAAAGPGRDGGAPYLGVDGGVGAVPDAVDWRQSGAVTKVKDQGSCGACWSFSA 154

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
             A+EGINK+KTG L+SLSEQEL+DCD  S N GC GG M+ A++F+ K GG+ TE DYP
Sbjct: 155 TGAMEGINKIKTGSLISLSEQELIDCD-RSYNSGCGGGLMDYAYKFVVKNGGIDTEADYP 213

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           YR  +  C  +K K   VTI GY+ +PA                        AFQLYS G
Sbjct: 214 YRETDGTCNKNKLKRRVVTIDGYKDVPANNEDMLLQAVAQQPVSVGICGSARAFQLYSKG 273

Query: 270 VFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           +FD  C   L+H + +VGYG + G+ YW+VKNSWG SWG  GY+ M RN+ +SN G+CGI
Sbjct: 274 IFDGPCPTSLDHAILIVGYGSEGGKDYWIVKNSWGESWGMKGYMYMHRNTGNSN-GVCGI 332

Query: 330 LMQASY 335
               S+
Sbjct: 333 NQMPSF 338


>gi|297598407|ref|NP_001045533.2| Os01g0971400 [Oryza sativa Japonica Group]
 gi|15289977|dbj|BAB63672.1| putative cysteine protease CP1 [Oryza sativa Japonica Group]
 gi|125529282|gb|EAY77396.1| hypothetical protein OsI_05384 [Oryza sativa Indica Group]
 gi|125573472|gb|EAZ14987.1| hypothetical protein OsJ_04922 [Oryza sativa Japonica Group]
 gi|215740756|dbj|BAG97412.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741010|dbj|BAG97505.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765325|dbj|BAG87022.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767338|dbj|BAG99566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255674119|dbj|BAF07447.2| Os01g0971400 [Oryza sativa Japonica Group]
          Length = 365

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 188/320 (58%), Gaps = 39/320 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + + E FE ++ +Y + Y S +E  RRF ++  N+ +ID  N +   + L  N+FADL++
Sbjct: 46  ERLMELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWLGLNEFADLTH 105

Query: 116 EEFISTYLGYN-----KPYNEP--RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           +EF + YLG       +  N+   R+  V+   LP  VDWRK+GAVT VK+QGQCGSCWA
Sbjct: 106 DEFKAAYLGLTLTPARRNSNDQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQGQCGSCWA 165

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS VAAVEGIN + TG L  LSEQEL+DCD +  N GC+GG M+ AF +I   GG+ TE+
Sbjct: 166 FSTVAAVEGINAIVTGNLTRLSEQELIDCDTDG-NNGCSGGLMDYAFSYIAANGGLHTEE 224

Query: 229 DYPYRGKNDRCQTDKTKHH-------AVTITGYEAIP----------------------A 259
            YPY  +   C+   T+         AVTI+GYE +P                      +
Sbjct: 225 SYPYLMEEGTCRRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALLKALAHQPVSVAIEAS 284

Query: 260 RYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              FQ YS GVFD  CG +L+HGVT VGYG    G  Y +VKNSWG+ WGE GYIRM R 
Sbjct: 285 GRNFQFYSGGVFDGPCGTRLDHGVTAVGYGTASKGHDYIIVKNSWGSHWGEKGYIRMRRG 344

Query: 319 SPSSNIGICGILMQASYPVK 338
           +   + G+CGI   ASYP K
Sbjct: 345 TGKHD-GLCGINKMASYPTK 363


>gi|226533314|ref|NP_001150119.1| xylem cysteine proteinase 2 [Zea mays]
 gi|195636886|gb|ACG37911.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|223946183|gb|ACN27175.1| unknown [Zea mays]
 gi|413951209|gb|AFW83858.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 385

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 193/356 (54%), Gaps = 56/356 (15%)

Query: 37  VLGIPAGAWS-EGYPQK--YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
            L  P+G +S  GY ++     +S+ E FE WL ++ R Y S +E  RRF ++  N+ +I
Sbjct: 31  ALARPSGDFSIVGYSEEDLSSHESLAELFERWLSRHRRAYASLEEKLRRFQVFKDNLHHI 90

Query: 94  DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-------------- 139
           D  N +  S+ L  N+FADL+++EF +TYLG      +                      
Sbjct: 91  DETNRKVSSYWLGLNEFADLTHDEFKATYLGLRSSVGDGGSGIDDDDEPEEEEGYEGVDG 150

Query: 140 LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
             LP SVDWR +GAVT VK+QGQCGSCWAFS VAAVEGIN++ TG L +LSEQEL+DCD 
Sbjct: 151 ASLPKSVDWRSKGAVTGVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDT 210

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH------------ 247
           +  N GCNGG M+ AF +I   GG+ TE+ YPY  +   CQ   +               
Sbjct: 211 DG-NNGCNGGLMDYAFSYIAHNGGLHTEEAYPYLMEEGTCQRSSSSEKKWPGSSEDANDD 269

Query: 248 --AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGV 283
              VTI+GYE +P                      +   FQ YS GVFD  CG QL+HGV
Sbjct: 270 AAVVTISGYEDVPRNNEQALLKALAQQPVSVAIEASGRNFQFYSGGVFDGPCGTQLDHGV 329

Query: 284 TVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
             VGYG    G  Y +VKNSWG SWGE GYIRM R +     G+CGI   ASYP K
Sbjct: 330 AAVGYGTAAKGHDYIIVKNSWGPSWGEKGYIRMRRGTGKRQ-GLCGINKMASYPTK 384


>gi|307111936|gb|EFN60170.1| hypothetical protein CHLNCDRAFT_59551 [Chlorella variabilis]
          Length = 364

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/321 (45%), Positives = 185/321 (57%), Gaps = 38/321 (11%)

Query: 56  QSMEERFENWLKQY----SREYGSEDE-WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKF 110
           +S  E F+ W+       +R Y S  E ++RRF I+  N+++    N+++ S  L+   +
Sbjct: 40  ESPREAFDFWVHTVKPPSNRAYASSAEVYERRFNIWLDNLRFAHEYNARHTSHWLSMGVY 99

Query: 111 ADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGL--PASVDWRKEGAVTPVKDQGQCGS 165
           ADLS +E+ S  LGYN   ++ R        Y G   P  VDW   GAVTPVKDQ  CGS
Sbjct: 100 ADLSQDEYRSKALGYNAHLHKKRPLRAAPFLYKGTVPPEEVDWVAGGAVTPVKDQLLCGS 159

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS   AVEG N + TGKLVSLSEQ LVDCD    + GC GG+M+ AF+FI   GG+ 
Sbjct: 160 CWAFSTTGAVEGANAIATGKLVSLSEQMLVDCD-REYDTGCRGGFMDSAFDFIVNNGGID 218

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAF 263
           TEDDYPYR ++  CQ ++T+ H VTI GY+ +P                       + AF
Sbjct: 219 TEDDYPYRAEDGICQDNRTRRHVVTIDGYQDVPPNDENALMKAVAHQPVSVAIEADQLAF 278

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGE----DHGEKYWLVKNSWGTSWGEAGYIRMARN- 318
           QLY  GVFD  CG  L+H V VVGYG      H   YWLVKNSWG  WGE GYIR+ RN 
Sbjct: 279 QLYGGGVFDAECGTALDHAVLVVGYGTASNGTHNLPYWLVKNSWGAEWGEKGYIRLLRNL 338

Query: 319 SPSSNIGICGILMQASYPVKR 339
              +  G CG+ M AS+P+K+
Sbjct: 339 GKDAPEGQCGLAMYASFPIKK 359


>gi|302763831|ref|XP_002965337.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
 gi|300167570|gb|EFJ34175.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
          Length = 343

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/347 (40%), Positives = 202/347 (58%), Gaps = 39/347 (11%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKY-DPQSMEER--FENWLKQYSREYGSEDEWQ 80
           M  N + S  +L V+ + A  ++   P    D +++E +  FE+W  ++ + Y S+ E  
Sbjct: 1   MASNMIASTLILLVV-VGATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDLEKA 59

Query: 81  RRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPS-- 136
           RR  I+S  + YI+  N+Q N +F L  NKF+DL+N EF + ++G + +P  + R P+  
Sbjct: 60  RRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRYQDRLPAED 119

Query: 137 --VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
             V    LP S+DWR++GAVTP+KDQG CGSCWAFSA+A++E  + L T +LVSLSEQ+L
Sbjct: 120 EDVDVSSLPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQL 179

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK--HHAVTIT 252
           +DCD  + + GC+GG ME AF+F+ K GGVTTE  YPY G    C  +K    +    IT
Sbjct: 180 MDCD--TVDAGCDGGLMETAFKFVVKNGGVTTEASYPYTGSVGSCNANKVAIINKVAEIT 237

Query: 253 GYEAIPARYA----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           G++ +    A                      FQ Y  G+    CG  L+HGV ++GYG 
Sbjct: 238 GFKVVTEDSADALMKAVSKTPVTVSICGSDENFQNYKSGILSGQCGDSLDHGVLLIGYGT 297

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           + G  YW++KNSWGTSWGE G++++ R       GICG+   +SYP 
Sbjct: 298 EGGMPYWIIKNSWGTSWGEDGFMKIERKDGD---GICGMNGDSSYPT 341


>gi|115464789|ref|NP_001055994.1| Os05g0508300 [Oryza sativa Japonica Group]
 gi|48475189|gb|AAT44258.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113579545|dbj|BAF17908.1| Os05g0508300 [Oryza sativa Japonica Group]
          Length = 450

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/307 (44%), Positives = 179/307 (58%), Gaps = 32/307 (10%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           E +FE W  ++ R Y +  E   R   ++ N  ++   N    S+ L  N FADL+++EF
Sbjct: 35  EAQFEAWCAEHGRSYATPGERAARLAAFADNAAFVAAHNGAPASYALALNAFADLTHDEF 94

Query: 119 ISTYLGYNKPYNEP-RWPSVQYLGL-------PASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            +  LG       P R     YLG+       P +VDWR+ GAVT VKDQG CG+CW+FS
Sbjct: 95  RAARLGRLAAAGGPGRDGGAPYLGVDGGVGAVPDAVDWRQSGAVTKVKDQGSCGACWSFS 154

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           A  A+EGINK+KTG L+SLSEQEL+DCD  S N GC GG M+ A++F+ K GG+ TE DY
Sbjct: 155 ATGAMEGINKIKTGSLISLSEQELIDCD-RSYNSGCGGGLMDYAYKFVVKNGGIDTEADY 213

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PYR  +  C  +K K   VTI GY+ +PA                        AFQLYS 
Sbjct: 214 PYRETDGTCNKNKLKRRVVTIDGYKDVPANNEDMLLQAVAQQPVSVGICGSARAFQLYSK 273

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           G+FD  C   L+H + +VGYG + G+ YW+VKNSWG SWG  GY+ M RN+ +SN G+CG
Sbjct: 274 GIFDGPCPTSLDHAILIVGYGSEGGKDYWIVKNSWGESWGMKGYMYMHRNTGNSN-GVCG 332

Query: 329 ILMQASY 335
           I    S+
Sbjct: 333 INQMPSF 339


>gi|297799636|ref|XP_002867702.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313538|gb|EFH43961.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 191/309 (61%), Gaps = 37/309 (11%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           F+ W+ ++ + Y +   E +RRF  +  N+++ID  N++NLS++L   +FADL+ +E+  
Sbjct: 48  FQMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRD 107

Query: 121 TYLGYNKPYNEPRWPSVQYLGL-----PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            + G  KP       S +Y+ L     P SVDWR EGAV+ +KDQG C SCWAFS VAAV
Sbjct: 108 LFPGSPKPKQRNLRISRRYVPLDGDQLPESVDWRNEGAVSAIKDQGTCNSCWAFSTVAAV 167

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNG-GYMEKAFEFITKIGGVTTEDDYPYRG 234
           EGINK+ TG+LVSLSEQELVDC  N  N GC G G M+ AF+F+   GG+ ++ DYPY+G
Sbjct: 168 EGINKIVTGELVSLSEQELVDC--NLVNNGCYGSGTMDAAFQFLINNGGLDSDTDYPYQG 225

Query: 235 KNDRC-QTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVF 271
               C + + T +  +TI  YE +PA                         F LY  G++
Sbjct: 226 SQGYCNRKESTSNKIITIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYRSGIY 285

Query: 272 DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGI 329
           +  CG  L+H + +VGYG ++G+ YW+V+NSWGT+WG+AGY +MARN   PS   G+CGI
Sbjct: 286 NGPCGTDLDHALVIVGYGSENGQDYWIVRNSWGTTWGDAGYAKMARNFEYPS---GVCGI 342

Query: 330 LMQASYPVK 338
            M ASYPVK
Sbjct: 343 AMLASYPVK 351


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 184/319 (57%), Gaps = 43/319 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFAD 112
           D   M  R++ W+ QY R+Y  + E   RF ++ +N ++ID  N+     + L  N+FAD
Sbjct: 51  DEAMMMARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFAD 110

Query: 113 LSNEEFISTYLGYNKPYNEP----------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           L+++EF + Y G  KP   P          ++ +   L     VDWR++GAVTPVK+QGQ
Sbjct: 111 LTSKEFAAMYTGLRKPAAVPSGAKQIPAGFKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQ 170

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CG CWAFSAV A+EG+  + TG LVSLSEQ+++DCD +  NQGCNGGYM+ AF+++   G
Sbjct: 171 CGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVVNNG 230

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------R 260
           GVTTED YPY      CQ       A TI+G++ +P+                       
Sbjct: 231 GVTTEDAYPYSAVQGTCQ---NVQPAATISGFQDLPSGDENALANAVANQPVSVGVDGGS 287

Query: 261 YAFQLYSHGVFD-EYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
             FQ Y  G++D + CG  +NH VT +GYG +D G +YW++KNSWGT WGE G++++   
Sbjct: 288 SPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQL--- 344

Query: 319 SPSSNIGICGILMQASYPV 337
                +G CGI   ASYP 
Sbjct: 345 --QMGVGACGISTMASYPT 361


>gi|45738078|gb|AAS75836.1| fastuosain precursor [Bromelia fastuosa]
          Length = 324

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/312 (45%), Positives = 186/312 (59%), Gaps = 35/312 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFAD 112
           DP  M ERFE W+ +Y R Y    E  RRF I+ +NV +I+  N+++  S+ L  N+F D
Sbjct: 4   DP--MMERFEEWMAEYGRVYNDNAEKMRRFQIFKNNVNHIETFNNRSGNSYTLGVNQFTD 61

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           ++N EF++ Y G + P N  R P V +       +P S+DWR  GAVT VK+QG CGSCW
Sbjct: 62  MTNNEFLARYTGASLPLNIERDPVVSFDDVDISAVPQSIDWRDYGAVTSVKNQGSCGSCW 121

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA+A VEGI K+K G L+SLSEQE++DC +   + GC+GG++ KA++FI    GVT+ 
Sbjct: 122 AFSAIATVEGIYKIKAGNLISLSEQEVLDCAL---SYGCDGGWVNKAYDFIISNNGVTSF 178

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGY---------------------EAIPARYAFQLY 266
            + PY+G    C  +   + A  ITGY                       I A   FQ Y
Sbjct: 179 ANLPYKGYKGPCNHNDLPNKAY-ITGYTYVQSNNERSMMIAVANQPIAALIDAGGDFQYY 237

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
             GVF   CG  LNH +TV+GYG+   G KYW+VKNSWGTSWGE GYIRMAR+  SS  G
Sbjct: 238 KSGVFTGSCGTSLNHAITVIGYGQTSSGTKYWIVKNSWGTSWGERGYIRMARDV-SSPYG 296

Query: 326 ICGILMQASYPV 337
           +CGI M   +P 
Sbjct: 297 LCGIAMAPLFPT 308


>gi|118124|sp|P25250.1|CYSP2_HORVU RecName: Full=Cysteine proteinase EP-B 2; Flags: Precursor
 gi|1146118|gb|AAA85036.1| cysteine proteinase EPB2 precursor [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 186/318 (58%), Gaps = 38/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLS 114
           +++ + +E W   + R      E  RRFG + SN  +I   N + +  ++L  N+F D+ 
Sbjct: 40  EALWDLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMD 98

Query: 115 NEEFISTYLG---YNKPYNEPRWPSVQYLGL-----PASVDWRKEGAVTPVKDQGQCGSC 166
             EF +T++G    + P   P  P   Y  L     P SVDWR++GAVT VKDQG+CGSC
Sbjct: 99  QAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V +VEGIN ++TG LVSLSEQEL+DCD  ++N GC GG M+ AFE+I   GG+ T
Sbjct: 159 WAFSTVVSVEGINAIRTGSLVSLSEQELIDCDT-ADNDGCQGGLMDNAFEYIKNNGGLIT 217

Query: 227 EDDYPYRGKNDRCQTDKTKHHA---VTITGYEAIPARY---------------------- 261
           E  YPYR     C   +   ++   V I G++ +PA                        
Sbjct: 218 EAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGK 277

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AF  YS GVF   CG +L+HGV VVGYG  + G+ YW VKNSWG SWGE GYIR+ ++S 
Sbjct: 278 AFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSG 337

Query: 321 SSNIGICGILMQASYPVK 338
           +S  G+CGI M+ASYPVK
Sbjct: 338 ASG-GLCGIAMEASYPVK 354


>gi|255635584|gb|ACU18142.1| unknown [Glycine max]
          Length = 345

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 190/319 (59%), Gaps = 33/319 (10%)

Query: 48  GYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK 104
           GY  + D +SM+   E FE+W+ ++ + Y S +E   RF I+  N+++ID  N    ++ 
Sbjct: 31  GYSSE-DLKSMDKLIELFESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVSNYW 89

Query: 105 LTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY----LGLPASVDWRKEGAVTPVKDQ 160
           L  N+FADLS++EF + YLG    Y+  R    ++    + LP SVDWRK+GAV PVK+Q
Sbjct: 90  LGLNEFADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQ 149

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFS VAAVEGIN++ TG L SLSEQEL+DCD    N GCNGG M+ AF FI +
Sbjct: 150 GSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYSN-GCNGGLMDYAFSFIVE 208

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------- 258
            GG+  E+DYPY  +   C+  K +   VTI+GY  +P                      
Sbjct: 209 NGGLHKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQSLSVAIEA 268

Query: 259 ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
           +   FQ YS GVFD +CG  L+HGV  VGYG   G  Y +VKNSWG+ WGE GYIRM R 
Sbjct: 269 SGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEKGYIRM-RG 327

Query: 319 SPSSNIGICGILMQASYPV 337
           +  +  G    L  ASYP+
Sbjct: 328 TLETR-GNLRYLQMASYPL 345


>gi|3377948|emb|CAA08860.1| cysteine proteinase precursor, AN8 [Ananas comosus]
          Length = 356

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/337 (43%), Positives = 198/337 (58%), Gaps = 39/337 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L LFL  +   P+ A ++   +  DP  M +RFE W+ +Y R Y   DE  RRF I+ +N
Sbjct: 10  LFLFLCVMWASPSAASAD---EPSDP--MMKRFEEWMVEYGRVYKDNDEKMRRFQIFKNN 64

Query: 90  VQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPSVQY-----LGL 142
           V +I+  NS+N  S+ L  N+F D++N EF++ Y G  ++P N  R P V +       +
Sbjct: 65  VNHIETFNSRNKDSYTLGINQFTDMTNNEFVAQYTGGISRPLNIEREPVVSFDDVDISAV 124

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P S+DWR  GAVT VK+Q  CG+CWAF+A+A VE I K+K G L  LSEQ+++DC   ++
Sbjct: 125 PQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC---AK 181

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
             GC GG+  +AFEFI    GV +   YPY+     C+T+   + A  ITGY  +P    
Sbjct: 182 GYGCKGGWEFRAFEFIISNKGVASVAIYPYKAAKGTCKTNGVPNSAY-ITGYARVPRNNE 240

Query: 259 -----------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVK 300
                            A    Q Y+ GVF+  CG  LNH VT +GYG+D +G+KYW+VK
Sbjct: 241 SSMMYAVSKQPITVAVDANANSQYYNSGVFNGPCGTSLNHAVTAIGYGQDSNGKKYWIVK 300

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           NSWG  WGEAGYIRMAR+  SS+ GICGI + + YP 
Sbjct: 301 NSWGARWGEAGYIRMARDVSSSS-GICGIAIDSLYPT 336


>gi|357452869|ref|XP_003596711.1| Cysteine proteinase [Medicago truncatula]
 gi|355485759|gb|AES66962.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 186/312 (59%), Gaps = 35/312 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEF 118
           E+ E W++++ + Y    E ++RF I+  N+++I+  N+  +  F L+ N+F D +N+EF
Sbjct: 33  EKHEQWMEEHGKFYKDAAEKEQRFQIFKENLEFIESFNAAGDNGFNLSINQFGDQTNDEF 92

Query: 119 ISTYL-GYNKPY---------NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            + YL G  KP           E  +       +PA++DWR+ GAVTP+K Q  CGSCWA
Sbjct: 93  KANYLNGKKKPLIGVGIAAIEEESVFRYENVTEVPATMDWRERGAVTPIKHQHLCGSCWA 152

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           F+ VAA+EGI+++ TG+LVSLSEQELVDC   +   GCNGGY+E A +FI K GG+T+E 
Sbjct: 153 FATVAAIEGIHQITTGRLVSLSEQELVDCVKTNTTDGCNGGYVEDACDFIVKKGGITSET 212

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLY 266
           +YPY   + +C   K  ++   I GYE +PA                      + AFQ Y
Sbjct: 213 NYPYTRVDGKCNVRKGTYNVAKIKGYEHVPANNEKALLKAVANQPIAVYIAATKRAFQFY 272

Query: 267 SHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           S G+    CG  L+H VT+VGYG  D G KYWLVKNSWGT WGE GYI++ R+  +   G
Sbjct: 273 SSGILKGKCGIDLDHTVTIVGYGTSDDGVKYWLVKNSWGTKWGEKGYIKIKRDVHAKE-G 331

Query: 326 ICGILMQASYPV 337
            CGI M  +YP+
Sbjct: 332 SCGIAMVPTYPI 343


>gi|118120|sp|P25249.1|CYSP1_HORVU RecName: Full=Cysteine proteinase EP-B 1; Flags: Precursor
 gi|1146116|gb|AAA85035.1| cysteine proteinase EPB1 precursor [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 186/318 (58%), Gaps = 38/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLS 114
           +++ + +E W   + R      E  RRFG + SN  +I   N + +  ++L  N+F D+ 
Sbjct: 40  EALWDLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMD 98

Query: 115 NEEFISTYLG---YNKPYNEPRWPSVQYLGL-----PASVDWRKEGAVTPVKDQGQCGSC 166
             EF +T++G    + P   P  P   Y  L     P SVDWR++GAVT VKDQG+CGSC
Sbjct: 99  QAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V +VEGIN ++TG LVSLSEQEL+DCD  ++N GC GG M+ AFE+I   GG+ T
Sbjct: 159 WAFSTVVSVEGINAIRTGSLVSLSEQELIDCDT-ADNDGCQGGLMDNAFEYIKNNGGLIT 217

Query: 227 EDDYPYRGKNDRCQTDKTKHHA---VTITGYEAIPARY---------------------- 261
           E  YPYR     C   +   ++   V I G++ +PA                        
Sbjct: 218 EAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGK 277

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AF  YS GVF   CG +L+HGV VVGYG  + G+ YW VKNSWG SWGE GYIR+ ++S 
Sbjct: 278 AFMFYSEGVFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSG 337

Query: 321 SSNIGICGILMQASYPVK 338
           +S  G+CGI M+ASYPVK
Sbjct: 338 ASG-GLCGIAMEASYPVK 354


>gi|226506492|ref|NP_001140873.1| uncharacterized protein LOC100272949 precursor [Zea mays]
 gi|194701540|gb|ACF84854.1| unknown [Zea mays]
          Length = 379

 Score =  253 bits (647), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 144/318 (45%), Positives = 182/318 (57%), Gaps = 48/318 (15%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           +E W + + R +    E  RRFG +  NV++I   N + +  ++L  N+F D+  EEF S
Sbjct: 44  YERW-QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRS 102

Query: 121 TYLGYNKPYNEPRW---PSVQYLGLPA-----------SVDWRKEGAVTPVKDQGQCGSC 166
           T+   +   N+ R    P+ +   +P            SVDWR+EGAVT VK QG CGSC
Sbjct: 103 TFA--DSRINDLRRQDSPAARAGAVPGFMYDSAADPPRSVDWRQEGAVTGVKVQGHCGSC 160

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V AVEGIN ++TG L SLSEQEL+DCD  ++  GC GG ME AFEFI   GG+TT
Sbjct: 161 WAFSTVVAVEGINAIRTGSLASLSEQELIDCD--TDENGCQGGLMENAFEFIKSFGGITT 218

Query: 227 EDDYPYRGKNDRCQTDKTKH---HAVTITGYEAIPA----------------------RY 261
           E  YPYR  N  C  D+ +      V I G++ +PA                        
Sbjct: 219 EAAYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQPVSVAVDAGGQ 278

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AFQ YS GVF   CG  L+HGV  VGYG  D G  YW+VKNSWGTSWGE GYIRM R   
Sbjct: 279 AFQFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGEGGYIRMQRG-- 336

Query: 321 SSNIGICGILMQASYPVK 338
           + N G+CGI M+AS+P+K
Sbjct: 337 AGNGGLCGIAMEASFPIK 354


>gi|115448287|ref|NP_001047923.1| Os02g0715000 [Oryza sativa Japonica Group]
 gi|42408029|dbj|BAD09165.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113537454|dbj|BAF09837.1| Os02g0715000 [Oryza sativa Japonica Group]
 gi|215737450|dbj|BAG96580.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765786|dbj|BAG87483.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623551|gb|EEE57683.1| hypothetical protein OsJ_08138 [Oryza sativa Japonica Group]
          Length = 366

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 186/314 (59%), Gaps = 32/314 (10%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           P  +   F +W  ++S+ Y S  E  +R+ I+  N+++I   N +N S+ L  N FAD++
Sbjct: 48  PNKLVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNGSYWLGLNHFADIA 107

Query: 115 NEEFISTYLGYN--------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           +EEF ++YLG          +P+    +     + LP +VDWRK+GAVTPVK+QG+CGSC
Sbjct: 108 HEEFKASYLGLKPGLARRDAQPHGSTTFRYANAVNLPWAVDWRKKGAVTPVKNQGECGSC 167

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TGKLVSLSEQEL+DCD N+ N GC GG M+ AF +I    G+ T
Sbjct: 168 WAFSTVAAVEGINQIVTGKLVSLSEQELMDCD-NTFNHGCRGGLMDFAFAYIMGNQGIYT 226

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQ 264
           E+DYPY  +   C+  +     +TITGYE +PA                         FQ
Sbjct: 227 EEDYPYLMEEGYCREKQPHSKVITITGYEDVPANSETSLLKALAHQPVSVGIAAGSRDFQ 286

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            Y  G+FD  CG Q +H +T VGYG  +G+ Y ++KNSWG +WGE GY R+ R +     
Sbjct: 287 FYKGGIFDGECGIQPDHALTAVGYGSYYGQDYIIMKNSWGKNWGEQGYFRIRRGTGKPE- 345

Query: 325 GICGILMQASYPVK 338
           G+C I   ASYP K
Sbjct: 346 GVCDIYKIASYPTK 359


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  253 bits (646), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 200/338 (59%), Gaps = 38/338 (11%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKY-DPQSMEER--FENWLKQYSREYGSEDEWQRRFGIYS 87
           +L LL V+G  A  ++   P    D +++E +  FE+W  ++ + Y S+ E  RR  I+S
Sbjct: 5   TLILLVVVG--ATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDWEKARRLMIFS 62

Query: 88  SNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLG-YNKPYNEPRWPS----VQYLG 141
             + YI+  N+Q N +F L  NKF+DL+N EF + ++G + +P  + R P+    V    
Sbjct: 63  DTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRYQDRLPAEDEDVDVSS 122

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP S+DWR++GAVTP+KDQG CGSCWAFSA+A++E  + L T +LVSLSEQ+L+DCD  +
Sbjct: 123 LPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQLMDCD--T 180

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY 261
            + GC+GG ME AF+F+ K GGVTTE  YPY G    C  +K K+    ITG++ +    
Sbjct: 181 VDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGSVGSCNANKAKNKVAEITGFKVVTEDS 240

Query: 262 A----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
           A                      FQ Y  G+    C   L+HGV ++GYG + G  YW++
Sbjct: 241 ADALMKAVSKTPVTVSICGSDENFQNYKSGILSGKCDDSLDHGVLLIGYGTEGGMPYWII 300

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWGTSWGE G++++ R       G+CG+   +SYP 
Sbjct: 301 KNSWGTSWGEDGFMKIERKDGD---GMCGMNGDSSYPT 335


>gi|414588007|tpg|DAA38578.1| TPA: hypothetical protein ZEAMMB73_159244 [Zea mays]
          Length = 307

 Score =  253 bits (646), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 36/312 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNE 116
           M ER E W+ +Y R Y    E  RRF ++  N  +++  N+   + F L  N+FADL+ E
Sbjct: 1   MAERHERWMAEYDRVYKDAAEKARRFEVFKDNFAFVESFNADKKNKFWLGVNQFADLTTE 60

Query: 117 EFISTYLGYNKPYNEPRWPSVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           EF +   G+ KP +    P+  +         LP +VDWR +GAVTP+K+QGQCG CWAF
Sbjct: 61  EFKANK-GF-KPISAEEVPTTGFKYENLSVSALPTAVDWRTKGAVTPIKNQGQCGCCWAF 118

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA+AA+EGI KL TG LVSLSEQE VDCD ++ ++GC GG+M+ AFEF+ K GG+ TE  
Sbjct: 119 SAIAAMEGIVKLSTGNLVSLSEQEPVDCDTHNMDEGCEGGWMDNAFEFVIKNGGLATESS 178

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYS 267
           YPY+  + +C+       A TI G+E +P                      +   F LYS
Sbjct: 179 YPYKVVDGKCKGG--SKSAATIKGHEDVPPNNEAALMKVVASQPVSVAVDASDRTFMLYS 236

Query: 268 HGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            GV    CG QL+HG+  +GYG E    KYW++KNSWGT+WGE G++RM ++  S   G+
Sbjct: 237 GGVMTGSCGTQLDHGIAAIGYGVESDDTKYWILKNSWGTTWGEKGFLRMEKDI-SDKRGM 295

Query: 327 CGILMQASYPVK 338
           C + M+ SYP +
Sbjct: 296 CDLAMKPSYPTE 307


>gi|226509942|ref|NP_001146834.1| cysteine protease precursor [Zea mays]
 gi|159506725|gb|ABW97700.1| cysteine protease [Zea mays]
 gi|414867308|tpg|DAA45865.1| TPA: cysteine protease [Zea mays]
          Length = 352

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/311 (43%), Positives = 179/311 (57%), Gaps = 35/311 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNE 116
           M +RF +W   Y+R Y + +E QRRF +Y  N+++I+  N + NL++ L +N+FADL+ E
Sbjct: 45  MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 104

Query: 117 EFISTYLGYNKPYNEPRW-------PSVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWA 168
           EF+  Y     P              S   +  P SVDWR +GAVTP+K+QG  C SCWA
Sbjct: 105 EFLDLYTMKGMPVRRDAGKKRANVSSSAAAVDAPTSVDWRSKGAVTPIKNQGPSCSSCWA 164

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           F   A +E I K+ TGKLVSLSEQEL+DCD    + GCN GY    + ++ + GG+TTE 
Sbjct: 165 FVTAATIESITKITTGKLVSLSEQELIDCD--PYDGGCNLGYFVNGYRWVIQNGGLTTEA 222

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY--------------------AFQLYSH 268
           +YPY+ +   C   +   HA TI+ Y  +PA                      + Q YS 
Sbjct: 223 NYPYQARRYACSRSRAAQHAATISDYVQLPAGEGQLQQAVAQQPVAAAIEMGGSLQFYSG 282

Query: 269 GVFDEYCGHQLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           GVF   CG ++NH +TVVGYG D   G KYWLVKNSWG SWGE GY+RM R+      G+
Sbjct: 283 GVFSGQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRG--GL 340

Query: 327 CGILMQASYPV 337
           CGI +  +YPV
Sbjct: 341 CGIALDLAYPV 351


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 184/320 (57%), Gaps = 44/320 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFAD 112
           D   M  R++ W+ QY R+Y  + E   RF ++ +N ++ID  N+     + L  N+FAD
Sbjct: 51  DEAMMMARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFAD 110

Query: 113 LSNEEFISTYLGYNKPYNEP-----------RWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           L+++EF + Y G  KP   P           ++ +   L     VDWR++GAVTPVK+QG
Sbjct: 111 LTSKEFAAMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVDWRQQGAVTPVKNQG 170

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCG CWAFSAV A+EG+  + TG LVSLSEQ+++DCD +  NQGCNGGYM+ AF+++   
Sbjct: 171 QCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVINN 230

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA---------------------- 259
           GGVTTED YPY      CQ       A TI+G++ +P+                      
Sbjct: 231 GGVTTEDAYPYSAVQGTCQ---NVQPAATISGFQDLPSGDENALANAVANQPVSVGVDGG 287

Query: 260 RYAFQLYSHGVFD-EYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
              FQ Y  G++D + CG  +NH VT +GYG +D G +YW++KNSWGT WGE G++++  
Sbjct: 288 SSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQL-- 345

Query: 318 NSPSSNIGICGILMQASYPV 337
                 +G CGI   ASYP 
Sbjct: 346 ---QMGVGACGISTMASYPT 362


>gi|400180443|gb|AFP73358.1| cysteine protease, partial [Solanum habrochaites]
          Length = 345

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 211/349 (60%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD+++EEF++ + G N P  Y  P   P
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAKFTGLNIPNSYLSPSPMP 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S ++         +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRS-QGKTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A +  Q Y+ G +D  C +++NH VT +GY
Sbjct: 234 VQISNYQVVPEGETSLLQAVTKQPVSIGIAASHDLQFYAGGTYDGSCANRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNP-AGLCDIAKMSSYP 341


>gi|242088413|ref|XP_002440039.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
 gi|241945324|gb|EES18469.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
          Length = 463

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 185/323 (57%), Gaps = 43/323 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ---------NLSFK 104
           DP++ E  F+ W  ++ + Y + +E   R  +++ N  ++   N++           S+ 
Sbjct: 33  DPRAYEALFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARVNAAGGGGAPPSYT 92

Query: 105 LTDNKFADLSNEEFISTYLGY----NKPYNEPRWPSVQYL-----GLPASVDWRKEGAVT 155
           L  N FADL++EEF +  LG           P  P  + L      +P ++DWR+ GAVT
Sbjct: 93  LALNAFADLTHEEFRAARLGRIAAGAAALRSPAAPVYRGLDGGLGAVPDALDWRENGAVT 152

Query: 156 PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAF 215
            VKDQG CG+CW+FSA  A+EGINK+KTG LVSLSEQEL+DCD  S N GC GG M+ A+
Sbjct: 153 KVKDQGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCD-RSYNSGCGGGLMDYAY 211

Query: 216 EFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR--------------- 260
           +F+ K GG+ TE+DYPYR  +  C  +K K   VTI GY  +P+                
Sbjct: 212 KFVVKNGGIDTEEDYPYREADGTCNKNKLKKRIVTIDGYSDVPSNKEDLLLQAVAQQPVS 271

Query: 261 -------YAFQLYS-HGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGY 312
                   AFQLYS  G+FD  C   L+H V +VGYG + G+ YW+VKNSWG SWG  GY
Sbjct: 272 VGICGSARAFQLYSQQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGESWGMKGY 331

Query: 313 IRMARNSPSSNIGICGILMQASY 335
           + M RN+  S  G+CGI M AS+
Sbjct: 332 MHMHRNTGDSK-GVCGINMMASF 353


>gi|125606204|gb|EAZ45240.1| hypothetical protein OsJ_29883 [Oryza sativa Japonica Group]
          Length = 350

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/325 (45%), Positives = 179/325 (55%), Gaps = 47/325 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           M +RFE W+ ++ R Y    E QRRF +Y  NV+ ++  NS +  +KL DNKFADL+NEE
Sbjct: 27  MLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSNGYKLADNKFADLTNEE 86

Query: 118 FISTYLGYNKPYNEPRWPS-----VQYLG------LPASVDWRKEGAVTPV-KDQGQCGS 165
           F +  LG+      P+  +     +   G      LP SVDWR +GAV    K     GS
Sbjct: 87  FRAKMLGFRPHVTIPQISNTCSADIAMPGESSDDILPKSVDWRNKGAVINRWKICVDAGS 146

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAA+EGIN++K G+LVSLSEQELVDCD   E  GC GGYM  AFEF+    G+T
Sbjct: 147 CWAFSAVAAIEGINQIKNGELVSLSEQELVDCD--DEAVGCGGGYMSWAFEFVVGNHGLT 204

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-------ARYA---------------F 263
           TE  YPY   N  CQ  K    AV I GY  +        AR A               F
Sbjct: 205 TEASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGSFMF 264

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK-----------YWLVKNSWGTSWGEAGY 312
           QLY  GV+   C   +NHGVTVVGYGE   +            YW+VKNSWG  WG+AGY
Sbjct: 265 QLYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGDAGY 324

Query: 313 IRMARNSPSSNIGICGILMQASYPV 337
           I M R+      G+CGI +  SYPV
Sbjct: 325 ILMQRDVAGLASGLCGIALLPSYPV 349


>gi|297819566|ref|XP_002877666.1| hypothetical protein ARALYDRAFT_906213 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323504|gb|EFH53925.1| hypothetical protein ARALYDRAFT_906213 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 304

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/293 (45%), Positives = 189/293 (64%), Gaps = 20/293 (6%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEF 118
           E+ E W+ +++R Y  + E   RF I+  N+++++  N + N ++KL  NKF+DL++EEF
Sbjct: 16  EKHEQWMSRFNRVYSDDSEKTSRFEIFKKNLKFVESFNMNTNNTYKLDVNKFSDLTDEEF 75

Query: 119 ISTYLGY--------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            + Y+G         ++     R+ +V   G   S+DWR EGAVTPVKDQGQCG CWAF+
Sbjct: 76  QARYMGLVPEGMTGDSQKTVSFRYENVSETG--ESMDWRLEGAVTPVKDQGQCGCCWAFA 133

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVAAVEG+ K+  G+LVSLSEQ+LVDC   + N GC+GG    A+++I +  G+T+E++Y
Sbjct: 134 AVAAVEGVTKIANGELVSLSEQQLVDCSTANNNMGCDGGLALTAYDYIKENQGITSEENY 193

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYS----HGVF-DEYCGHQLNHGVTV 285
           PY+     C++  T   A TI+GYEA+P      L      HG+F DEYCG   +H VT+
Sbjct: 194 PYQAVQQTCKS--TDPAAATISGYEAVPKDDEEALLKAVSQHGIFEDEYCGTDSHHAVTI 251

Query: 286 VGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VGYG  + G KYWL+KNSWG SWGE GY+R+ R+      G+CG+  +A YPV
Sbjct: 252 VGYGTSEEGIKYWLLKNSWGESWGENGYMRIKRDVDEPQ-GMCGLAHRAYYPV 303


>gi|449450419|ref|XP_004142960.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 345

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 196/314 (62%), Gaps = 35/314 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W K ++     +++  +RF ++  NV ++  +N  +  +KL  NKFAD+SN
Sbjct: 35  ESLWQLYERWGKHHTISRNLKEK-HKRFSVFKENVNHVFTVNQMDKPYKLKLNKFADMSN 93

Query: 116 EEFISTYLGYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF++ Y   N    +  +E R  +  ++      LP+SVDWR+ GAV  VK+QG+CGSC
Sbjct: 94  YEFVNFYARSNISHYRKLHERRRGAGGFMYEQDTDLPSSVDWRERGAVNAVKEQGRCGSC 153

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS+VAAVEGINK+KT +L+SLSEQEL+DC  N  N+GCNGG+ME AF+FI + GG+ T
Sbjct: 154 WAFSSVAAVEGINKIKTNQLLSLSEQELLDC--NYRNKGCNGGFMEIAFDFIKRNGGIAT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQL 265
           E+ YPY G    C++ +     V I GYE++P                     A   FQ 
Sbjct: 212 ENSYPYHGSRGLCRSSRISSPIVKIDGYESVPENEDALMQAVANQPVSVAIDAAGRDFQF 271

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GVFD YCG +LNHGV  +GYG  + G  YWLV+NSWG  WGE GY+RM R    +  
Sbjct: 272 YSQGVFDGYCGTELNHGVVAIGYGTTEDGTDYWLVRNSWGVGWGEDGYVRMKRGVEQAE- 330

Query: 325 GICGILMQASYPVK 338
           G+CGI M+ASYP+K
Sbjct: 331 GLCGIAMEASYPIK 344


>gi|242094000|ref|XP_002437490.1| hypothetical protein SORBIDRAFT_10g028000 [Sorghum bicolor]
 gi|241915713|gb|EER88857.1| hypothetical protein SORBIDRAFT_10g028000 [Sorghum bicolor]
          Length = 372

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 189/323 (58%), Gaps = 39/323 (12%)

Query: 50  PQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           P +     +   +E W  ++   +GS+D    R  ++  N++YID  N++      +F+L
Sbjct: 40  PVERADDEVRRMYEAWKSEHGHGHGSDDRL--RLEVFRDNLRYIDAHNAEADAGLHTFRL 97

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRW--------PSVQYLGLPASVDWRKEGAVTPV 157
               FADL+ EE+    LG+                 P  +   LP ++DWR+ GAVT V
Sbjct: 98  GLTPFADLTLEEYRGRALGFRARRGGASRVGSGSSYRPRPRGGDLPDAIDWRELGAVTGV 157

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+Q QCG CWAFSAVAA+EGIN++ TG LVSLSEQE++DCD  +++ GCNGG M+ AF+F
Sbjct: 158 KNQEQCGGCWAFSAVAAIEGINEIVTGNLVSLSEQEIIDCD--TQDGGCNGGEMQNAFQF 215

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI---------------PARYA 262
           +   GG+ TE DYPY G +  C  ++     VTI G+ ++               P   A
Sbjct: 216 VINNGGIDTEADYPYLGTDAACDANRVNERVVTIDGFVSVATENETALQEAVANQPVSVA 275

Query: 263 -------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
                  FQ Y+ G+F+  CG QL+HGVT VGYG ++G+ YW+VKNSW +SWGEAGYIR+
Sbjct: 276 IDASGRKFQHYTSGIFNGPCGTQLDHGVTAVGYGSENGKDYWIVKNSWSSSWGEAGYIRI 335

Query: 316 ARNSPSSNIGICGILMQASYPVK 338
            RN  ++  G CGI M ASYPVK
Sbjct: 336 RRNVAAAT-GKCGIAMDASYPVK 357


>gi|219687002|dbj|BAH08632.1| daikon cysteine protease RD21 [Raphanus sativus]
          Length = 289

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/220 (56%), Positives = 150/220 (68%), Gaps = 24/220 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P SVDWRKEGAV  VKDQG CGSCWAFS + AVEGINK+ TG L+SLSEQELVDCD  S
Sbjct: 3   IPESVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDT-S 61

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            NQGCNGG M+ AFEFI K GG+ TE+DYPY+  + RC  ++     VTI  YE +P   
Sbjct: 62  YNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQNRKNAKVVTIDAYEDVPENN 121

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                 AFQLYS GVFD  CG +L+HGV  VGYG ++G+ YW+V
Sbjct: 122 EAALKKALANQPISVAIEAGGRAFQLYSSGVFDGTCGTELDHGVVAVGYGTENGKDYWIV 181

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           +NSWG SWGE+GYI+MARN   +  G CGI M+ASYP+K+
Sbjct: 182 RNSWGGSWGESGYIKMARNIAEAT-GKCGIAMEASYPIKK 220


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/307 (44%), Positives = 185/307 (60%), Gaps = 40/307 (13%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEE 117
           F+ +  ++++ Y S +E  RRF ++S N+ +I+  N++      +  +  N+FADL+NEE
Sbjct: 30  FDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNEE 89

Query: 118 FISTYLGYNKPYNEP---RWPSVQYLGLP--ASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +   YL   +PY      R     +L  P   SVDWR++GAVTP+K+QGQCGSCW+FS  
Sbjct: 90  YRQLYL---RPYPTELLGRERQEVWLDGPNAGSVDWRQKGAVTPIKNQGQCGSCWSFSTT 146

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            +VEG + + TG LVSLSEQ+LVDC  +  NQGCNGG M+ AF++I   GG+ TE DYPY
Sbjct: 147 GSVEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPY 206

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGV 270
             ++  C   K   HAV+I+GY+ +P                       + +FQ+YS GV
Sbjct: 207 TARDGVCDKSKESKHAVSISGYKDVPQNNEDQLAAAVEKGPVSVAIEADQQSFQMYSSGV 266

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           F   CG  L+HGV VVGY  D    YW+VKNSWG SWG+ GYI M R   S+  GICGI 
Sbjct: 267 FSGPCGTNLDHGVLVVGYTSD----YWIVKNSWGASWGDQGYIMMKRGVSSA--GICGIA 320

Query: 331 MQASYPV 337
           MQ SYP+
Sbjct: 321 MQPSYPI 327


>gi|162463334|ref|NP_001104878.1| maize insect resistance2 precursor [Zea mays]
 gi|2425064|gb|AAB88262.1| cysteine proteinase Mir2 [Zea mays]
          Length = 493

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/296 (46%), Positives = 179/296 (60%), Gaps = 44/296 (14%)

Query: 81  RRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEFISTYLGYNKPYN------ 130
           RR  ++  N++YID  N++  +    F+L   +FADL+ EE+ +  L  ++  N      
Sbjct: 91  RRLEVFRDNLRYIDAHNAEADAGLHGFRLGLTRFADLTLEEYRARLLLGSRGRNGTAVGV 150

Query: 131 --EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
               R+  +    LP +VDWR+ GAV  VKDQGQCG CWAFSAVAAVEGINK+ TG L+S
Sbjct: 151 VGRRRYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLIS 210

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
           LSEQEL+DCD   ++QGC+GG M+ AF F+ K GG+ TE DYP+ G +  C         
Sbjct: 211 LSEQELIDCD-KFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTRV 269

Query: 249 VTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVV 286
           V+I  +E +P                      +R AFQLYS G+FD  CG  L+HGVTVV
Sbjct: 270 VSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVV 329

Query: 287 GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN----SPSSNIGICGILMQASYPVK 338
           GYG + G+ YW+VKNSWGT WGEAGY+RMARN     PS+     GI M+  YPVK
Sbjct: 330 GYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNVRVRPPSA-----GIAMEPLYPVK 380


>gi|125540888|gb|EAY87283.1| hypothetical protein OsI_08685 [Oryza sativa Indica Group]
          Length = 357

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 185/314 (58%), Gaps = 32/314 (10%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           P  +   F +W  ++S+ Y S  E  +R+ I+  N+++I   N +N S+ L  N FAD++
Sbjct: 39  PNKLVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNGSYWLGLNHFADIA 98

Query: 115 NEEFISTYLGYN--------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           +EEF ++YLG          +P+    +     + LP +VDWRK+GAVTPVK+QG+CGSC
Sbjct: 99  HEEFKASYLGLKPGLARRDAQPHGSTTFRYANAVNLPWAVDWRKKGAVTPVKNQGECGSC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS VAAVEGIN++ TGKLVSLSEQEL+DCD N+ N GC GG M+ AF +I    G+ T
Sbjct: 159 WAFSTVAAVEGINQIVTGKLVSLSEQELMDCD-NTFNHGCRGGLMDFAFAYIMGNQGIYT 217

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+DYPY  +   C+  +     +TITGYE +P                          FQ
Sbjct: 218 EEDYPYLMEEGYCREKQPHSKVITITGYEDVPENSETSLLKALAHQPVSVGIAAGSRDFQ 277

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            Y  G+FD  CG Q +H +T VGYG  +G+ Y ++KNSWG +WGE GY R+ R +     
Sbjct: 278 FYKGGIFDGECGIQPDHALTAVGYGSYYGQDYIIMKNSWGKNWGEQGYFRIRRGTGKPE- 336

Query: 325 GICGILMQASYPVK 338
           G+C I   ASYP K
Sbjct: 337 GVCDIYKIASYPTK 350


>gi|194352758|emb|CAQ00107.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/325 (41%), Positives = 183/325 (56%), Gaps = 39/325 (12%)

Query: 48  GYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI----DYINSQNL-- 101
           G  +       E +FE W  ++ + Y +  E   R   ++ N  ++    D + S     
Sbjct: 25  GRDESVSASDYEAQFEAWCAEHGKAYATPGERAARLAAFAENAAFVAAHNDAVASSGPGG 84

Query: 102 -SFKLTDNKFADLSNEEFISTYLGY----NKPYNEPRWPSVQYLG----LPASVDWRKEG 152
            S+ L  N FADL+++EF +  LG       P   P      + G    +P ++DWR+ G
Sbjct: 85  PSYTLALNAFADLTHDEFRAARLGRLAVGPGPLGAPSPSDGGFEGRVGAVPDALDWRQSG 144

Query: 153 AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYME 212
           AVT VKDQG CG+CW+FSA  A+EGINK+ TG L+SLSEQEL+DCD  S N GC GG M 
Sbjct: 145 AVTKVKDQGSCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCD-RSYNTGCGGGLMT 203

Query: 213 KAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------ 260
            A++F+ K GG+ TEDDYP+R  +  C  +K K H VTI GY+ +P+             
Sbjct: 204 YAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSKEDLLLQAVAQQ 263

Query: 261 ----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEA 310
                      AFQLYS G+FD  C   L+H V +VGYG + G+ YW+VKNSWG  WG  
Sbjct: 264 PISVGICGSARAFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMK 323

Query: 311 GYIRMARNSPSSNIGICGILMQASY 335
           GY+ M RN+ SS+ GICGI M AS+
Sbjct: 324 GYMHMHRNTGSSS-GICGINMMASF 347


>gi|400180449|gb|AFP73361.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/349 (40%), Positives = 207/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKKNMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QGQCG CWAFSAV ++EG  K+ TGKL+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGKLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAEGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|115468686|ref|NP_001057942.1| Os06g0582600 [Oryza sativa Japonica Group]
 gi|55296512|dbj|BAD68726.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113595982|dbj|BAF19856.1| Os06g0582600 [Oryza sativa Japonica Group]
 gi|215695236|dbj|BAG90427.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 357

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 184/320 (57%), Gaps = 40/320 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFA 111
           D  +M ER+E W   + R Y    E  RRF ++ +N  +ID  N+     S +LT NKFA
Sbjct: 41  DDSAMRERYEKWAADHGRTYKDSLEKARRFEVFRTNALFIDSFNAAGGKKSPRLTTNKFA 100

Query: 112 DLSNEEFISTYLGYNKPYNEP-------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           DL+NEEF   Y    +P++ P        + +V+   +PA+++WR  GAVT VK+Q  C 
Sbjct: 101 DLTNEEFAEYY---GRPFSTPVIGGSGFMYGNVRTSDVPANINWRDRGAVTQVKNQKDCA 157

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFSAVAAVEGI+++++  LV+LS Q+L+DC     N GCN G M++AF +IT  GG+
Sbjct: 158 SCWAFSAVAAVEGIHQIRSHNLVALSTQQLLDCSTGRNNHGCNRGDMDEAFRYITSNGGI 217

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
             E DYPY  +         K  A +I G++ +P                          
Sbjct: 218 AAESDYPYEDRALGTCRASGKPVAASIRGFQYVPPNNETALLLAVAHQPVSVALDGVGKV 277

Query: 263 FQLYSHGVF----DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMAR 317
            Q +S GVF    +E C   LNH +T VGYG D HG KYWL+KNSWGT WGE GY+++AR
Sbjct: 278 SQFFSSGVFGAMQNETCTTDLNHAMTAVGYGTDEHGTKYWLMKNSWGTDWGEGGYMKIAR 337

Query: 318 NSPSSNIGICGILMQASYPV 337
           +  +SN G+CG+ MQ SYPV
Sbjct: 338 DV-ASNTGLCGLAMQPSYPV 356


>gi|53791858|dbj|BAD53944.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 335

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 187/334 (55%), Gaps = 29/334 (8%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           + L +  ++ + A A S  Y    D     + FE W+ ++ + Y    E + RFGI+  N
Sbjct: 4   IVLLVCTLMALQAMAASAYYNNGSDDGVTMQMFEEWMAKFGKTYKCHGEKEHRFGIFRDN 63

Query: 90  VQYI-DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDW 148
           V +I  Y         +  N+FADL+N+EF++TY G   P+ +     V  +  P  +DW
Sbjct: 64  VHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPPHPKEAPRPVDPIWTPCCIDW 123

Query: 149 RKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG 208
           R  GAVT VKDQG CGSCWAF+AVAA+EG+ K++TG+L  LSEQELVDCD NS   GC G
Sbjct: 124 RFRGAVTGVKDQGACGSCWAFAAVAAIEGLTKIRTGQLTPLSEQELVDCDTNS--NGCGG 181

Query: 209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIP--------- 258
           G+ ++AFE +   GG+T E DY Y G   +C+ D    +HA +I GY A+P         
Sbjct: 182 GHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAASIGGYRAVPPNDERQLAT 241

Query: 259 --ARY-----------AFQLYSHGVFDEYCGHQLNHGVTVVGYGED--HGEKYWLVKNSW 303
             AR            AFQ Y  GVF   CG   NH VT+VGY +D   G+KYWL KNSW
Sbjct: 242 AVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGYCQDGASGKKYWLAKNSW 301

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G +WG+ GYI + ++    + G CG+ +   YP 
Sbjct: 302 GKTWGQQGYILLEKDIVQPH-GTCGLAVSPFYPT 334


>gi|194352762|emb|CAQ00109.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326517250|dbj|BAJ99991.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/315 (45%), Positives = 181/315 (57%), Gaps = 46/315 (14%)

Query: 62  FENWLKQYS--REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           +E W +Q++  R+ G   E  RRF ++  NV+ I   N  +  +KL  N+F D++ +EF 
Sbjct: 47  YERWREQHTVARDLG---EKARRFNVFRENVRLIHEFNRGDAPYKLRLNRFGDMTADEFR 103

Query: 120 STYLGYNKPYNEPRWPSVQYLG-------------LPASVDWRKEGAVTPVKDQGQCGSC 166
             Y      ++  R  S++  G             +P SVDWR++GAVT VKDQGQCGSC
Sbjct: 104 RAYASSRVSHH--RMFSLKEGGGGFMHGSAASVRDVPPSVDWRQKGAVTAVKDQGQCGSC 161

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS +AAVEGIN +++  L SLSEQ+LVDCD  S N GCNGG M+ AF++I K GGV  
Sbjct: 162 WAFSTIAAVEGINAIRSKNLTSLSEQQLVDCDTKS-NAGCNGGLMDYAFQYIAKHGGVAA 220

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           ED YPY+ +      +K     VTI GYE +PA                         FQ
Sbjct: 221 EDAYPYKARQ-ASSCNKKPSAVVTIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQ 279

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            YS GVF   CG +L+HGV  VGYG    G KYW+VKNSWG  WGE GYIRM R+     
Sbjct: 280 FYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVKNSWGPEWGEKGYIRMKRDVKDKE 339

Query: 324 IGICGILMQASYPVK 338
            G+CGI M+ASYPVK
Sbjct: 340 -GLCGIAMEASYPVK 353


>gi|400180447|gb|AFP73360.1| cysteine protease [Solanum chilense]
          Length = 345

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/350 (39%), Positives = 208/350 (59%), Gaps = 44/350 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYN--------KPYN 130
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N         P +
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 131 EPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
              +  +  L    +P+++DWR+ GAVT VK QGQCG CWAFSAV ++EG  K+ TGKL+
Sbjct: 117 STEFKKINDLSDDDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGKLM 176

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
             SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  
Sbjct: 177 EFSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTA 233

Query: 248 AVTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           AV I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +G
Sbjct: 234 AVQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIG 293

Query: 288 YGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           YG D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 YGTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 342


>gi|13432122|sp|P80884.2|ANAN_ANACO RecName: Full=Ananain; Flags: Precursor
 gi|2623956|emb|CAA05487.1| Ananain precursor [Ananas comosus]
          Length = 345

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/345 (40%), Positives = 198/345 (57%), Gaps = 38/345 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M   ++   L LFL  +   P+ A  +   +  DP  M ++FE W+ +Y R Y   DE  
Sbjct: 1   MTSKVQLVFLFLFLCVMWASPSAASCD---EPSDP--MMKQFEEWMAEYGRVYKDNDEKM 55

Query: 81  RRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY 139
            RF I+ +NV +I+  N++N  S+ L  N+F D++N EF++ Y G + P N  R P V +
Sbjct: 56  LRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSF 115

Query: 140 -----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  +P S+DWR  GAVT VK+QG+CGSCWAF+++A VE I K+K G LVSLSEQ++
Sbjct: 116 DDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQV 175

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           +DC V   + GC GG++ KA+ FI    GV +   YPY+     C+T+   + A  IT Y
Sbjct: 176 LDCAV---SYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAY-ITRY 231

Query: 255 ---------------------EAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-H 292
                                 A+ A   FQ Y  GVF   CG +LNH + ++GYG+D  
Sbjct: 232 TYVQRNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTGPCGTRLNHAIVIIGYGQDSS 291

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G+K+W+V+NSWG  WGE GYIR+AR+  SS+ G+CGI M   YP 
Sbjct: 292 GKKFWIVRNSWGAGWGEGGYIRLARDV-SSSFGLCGIAMDPLYPT 335


>gi|242032709|ref|XP_002463749.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
 gi|241917603|gb|EER90747.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
          Length = 381

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 184/317 (58%), Gaps = 45/317 (14%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEFI 119
           +E W + + R +    E  RRFG +  NV++I   N +    S++L  N+F D+  EEF 
Sbjct: 46  YERW-QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPSYRLRLNRFGDMGPEEFR 104

Query: 120 STYLGYN----KPYNEPRWPSVQYLG--------LPASVDWRKEGAVTPVKDQGQCGSCW 167
           ST+        + Y E    +    G        +P SVDWR+ GAVT VK+QG+CGSCW
Sbjct: 105 STFADSRINDLRRYRESSPAATAVPGFMYDDATDVPRSVDWRQHGAVTAVKNQGRCGSCW 164

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS V AVEGIN ++TG LVSLSEQELVDCD  +EN GC GG ME AF+FI   GG+TTE
Sbjct: 165 AFSTVVAVEGINAIRTGSLVSLSEQELVDCDT-AEN-GCQGGLMENAFDFIKSYGGITTE 222

Query: 228 DDYPYRGKNDRCQTDKTKHHA--VTITGYEAIP-----------AR-----------YAF 263
             YPYR  N  C   + +     V+I G++ +P           AR            AF
Sbjct: 223 SAYPYRASNGTCDGMRARRGRVHVSIDGHQMVPTGSEDALAKAVARQPVSVAIDAGGQAF 282

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYG--EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           Q YS GVF   CG  L+HGV VVGYG  +  G  YW+VKNSWG SWGE GYIRM R   +
Sbjct: 283 QFYSEGVFTGDCGTDLDHGVAVVGYGVSDVDGTPYWIVKNSWGPSWGEGGYIRMQRG--A 340

Query: 322 SNIGICGILMQASYPVK 338
            N G+CGI M+AS+P+K
Sbjct: 341 GNGGLCGIAMEASFPIK 357


>gi|357129125|ref|XP_003566217.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 380

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/340 (42%), Positives = 187/340 (55%), Gaps = 47/340 (13%)

Query: 41  PAGAWSEGYPQKYDPQSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYIN- 97
           PA A   G       +S+   +E W  ++  SR+     E  RRF ++  N + +   N 
Sbjct: 28  PASAMDFGESDLASEESLWALYERWRARHTVSRDLA---EKSRRFNVFRENARLVHEFNL 84

Query: 98  SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN---EPRWPSVQYL------------GL 142
            ++  +KL  N+FADL+++EF  +Y      ++   +PR  +                 L
Sbjct: 85  RRDAPYKLRLNRFADLTSDEFRRSYASSRVSHHRMFKPRAANNNDDDDDKGSSFTHGGAL 144

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR++GAVT VKDQGQCGSCWAFS +AAVEGIN ++T  L SLSEQ+LVDCD  + 
Sbjct: 145 PTSVDWREKGAVTGVKDQGQCGSCWAFSTIAAVEGINAIRTNNLTSLSEQQLVDCDTKT- 203

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK-NDRCQTDKTKHHAVTITGYEAIPAR- 260
           N GC+GG M+ AF +I K GGV  E  YPYR + +  C + K     V+I GYE +P   
Sbjct: 204 NAGCDGGLMDDAFSYIAKHGGVAAEKSYPYRARQSSSCNSKKAAAAVVSIDGYEDVPRND 263

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWL 298
                                  FQ YS GVF   CG +L+HGV  VGYG    G KYW+
Sbjct: 264 ETALKKAVAAQPVAVAIEAGGSHFQFYSEGVFAGKCGTELDHGVAAVGYGVTVDGTKYWI 323

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSWG  WGE GYIRM R+      G+CGI M+ASYPVK
Sbjct: 324 VKNSWGEEWGEKGYIRMKRDVADKE-GLCGIAMEASYPVK 362


>gi|242092704|ref|XP_002436842.1| hypothetical protein SORBIDRAFT_10g009850 [Sorghum bicolor]
 gi|241915065|gb|EER88209.1| hypothetical protein SORBIDRAFT_10g009850 [Sorghum bicolor]
          Length = 296

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 184/311 (59%), Gaps = 45/311 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           M  R E W+ QYSR Y    E  +RF ++ SNV++I+  N+  N  F L  N+FADL+N+
Sbjct: 1   MVARHEQWMVQYSRVYKDATEKAQRFEVFKSNVKFIESFNAGGNRKFWLGVNQFADLTND 60

Query: 117 EFISTYL--GYN-KPYNEP---RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           EF +T    G+   P   P   R+ ++    LPA++DWR +GAVTP+KDQGQC       
Sbjct: 61  EFRATKTNKGFKPSPVKVPTGFRYENISVDALPATIDWRTKGAVTPIKDQGQC------- 113

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
                EGI K+ TGKL+SLSEQELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE  Y
Sbjct: 114 -----EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKKGGLTTESSY 168

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY   + +C++    +   T+ G+E +PA                         FQ YS 
Sbjct: 169 PYTAADGKCKSG--SNSVATVKGFEDVPANDEASLMKAVANQPVSVAVDGGDMTFQFYSG 226

Query: 269 GVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           GV    CG  L+HG+  +GYG+   G KYWL+KNSWGT+WGE GY+RM ++  S   G+C
Sbjct: 227 GVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGENGYLRMEKDI-SDKRGMC 285

Query: 328 GILMQASYPVK 338
           G+ M+ SYP +
Sbjct: 286 GLAMEPSYPTE 296


>gi|242072390|ref|XP_002446131.1| hypothetical protein SORBIDRAFT_06g002140 [Sorghum bicolor]
 gi|241937314|gb|EES10459.1| hypothetical protein SORBIDRAFT_06g002140 [Sorghum bicolor]
          Length = 328

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 196/336 (58%), Gaps = 44/336 (13%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FLL +LG  +   S    ++    +M ER ENW+ +Y R Y    E  RRF ++  NV +
Sbjct: 7   FLLAILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFQVFKDNVAF 66

Query: 93  IDYINS-QNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP------RWPSVQYLGLPAS 145
           ++  N+ +N  F L  N+FADL+ EEF +   G+ KP  E       ++ ++    LP +
Sbjct: 67  VESFNTNKNNKFWLGVNQFADLTTEEFKANK-GF-KPTAEKVPTTGFKYENLSVSALPTA 124

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR +GAVTP+K+QGQC         AA+EGI KL TG L+SLSEQELVDCD +S ++G
Sbjct: 125 VDWRTKGAVTPIKNQGQC---------AAMEGIVKLSTGNLISLSEQELVDCDTHSMDEG 175

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           C GG+M+ AFEF+ K GG+ TE +YPY+  + +C+       A TI G+E +P       
Sbjct: 176 CEGGWMDSAFEFVIKNGGLATESNYPYKAVDGKCKGG--SKSAATIKGHEDVPVNNEAAL 233

Query: 259 ---------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNS 302
                          +   F LYS GV    CG +L+HG+  +GYG E  G KYW++KNS
Sbjct: 234 MKAVANQPVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGMESDGTKYWILKNS 293

Query: 303 WGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           WGT+WGE G++RM ++  +   G+CG+ M+ SYP +
Sbjct: 294 WGTTWGEKGFLRMEKD-ITDKRGMCGLAMKPSYPTE 328


>gi|3377950|emb|CAA08861.1| cysteine proteinase precursor, AN11 [Ananas comosus]
          Length = 357

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/337 (42%), Positives = 198/337 (58%), Gaps = 40/337 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L LFL  +   P+ A  +   +  DP  M +RFE W+ +Y R Y   DE  RRF I+ +N
Sbjct: 10  LFLFLCVMWASPSAASRD---EPSDP--MMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNN 64

Query: 90  VQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLP 143
           V +I+  NS+N  S+ L  N+F D++N EF++ Y G + P N  R P V +       +P
Sbjct: 65  VNHIETFNSRNGNSYTLGINQFTDMTNNEFVAQYTGVSLPLNIEREPVVSFDDVDISAVP 124

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
            S+DWR  GAVT VK+   CGSCWAF+A+A VE I K+K G L+SLSEQ+++DC V   +
Sbjct: 125 QSIDWRNYGAVTSVKNHIPCGSCWAFAAIATVESIYKIKRGYLISLSEQQVLDCAV---S 181

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR--CQTDKTKHHAVTITGY------- 254
            GC+GG++ KA++FI    GV +   YPY+    +  C+ +   + A  ITGY       
Sbjct: 182 YGCDGGWVNKAYDFIISNKGVASAAIYPYKASQGQGTCRINGVPNSAY-ITGYTRVQSNN 240

Query: 255 --------------EAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLV 299
                          +I A   FQ Y  GVF   CG  LNH +T++GYG+D  G+K+W+V
Sbjct: 241 ERSMMYAVSNQPIAASIEASGDFQHYKRGVFSGPCGTSLNHAITIIGYGQDSSGKKFWIV 300

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           +NSWG SWGE GYIRMAR+  SS+ G+CGI ++  YP
Sbjct: 301 RNSWGASWGERGYIRMARDVSSSS-GLCGIAIRPLYP 336


>gi|297733654|emb|CBI14901.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 133/258 (51%), Positives = 162/258 (62%), Gaps = 34/258 (13%)

Query: 113 LSNEEFISTYLG----YNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQC 163
           ++N EF STY G    +++ +   +  +  ++      +P SVDWRK+GAVTP+KDQGQC
Sbjct: 1   MTNHEFRSTYAGSKVNHHRMFRGSQHAAGSFMYEKVKSVPPSVDWRKKGAVTPIKDQGQC 60

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS V AVEGIN +KT KLVSLSEQELVDCD  SENQGCNGG M  AFEFI + GG
Sbjct: 61  GSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDT-SENQGCNGGLMGYAFEFIKEKGG 119

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           +TTE  YPY  ++  C   K     V+I G+E +P                         
Sbjct: 120 ITTEQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDALLKAAANQPISVAIDAGGS 179

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AFQ YS GVF   CG  L+HGV +VGYG    G KYW+VKNSWGT WGE GYIRM R   
Sbjct: 180 AFQFYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTDWGENGYIRMKRGI- 238

Query: 321 SSNIGICGILMQASYPVK 338
           S+  G+CGI ++ASYP+K
Sbjct: 239 SAKEGLCGIAVEASYPIK 256


>gi|297745594|emb|CBI40759.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  250 bits (639), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 176/300 (58%), Gaps = 29/300 (9%)

Query: 66  LKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGY 125
           + ++ + Y S +E   RF ++  N+++ID  N +  S+ L  N+FADLS+EEF   YLG 
Sbjct: 1   MSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKRKYLGL 60

Query: 126 N----KPYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
                K  + P   S + +  LP SVDWRK+GAV  VK+QG CGSCWAFS VAAVEGIN+
Sbjct: 61  KIELPKRRDSPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTVAAVEGINQ 120

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 240
           + TG L +LSEQEL+DCD    N GCNGG M+ AF FI   GG+  E+DYPY  +   C 
Sbjct: 121 IVTGNLTALSEQELIDCD-KPFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYVMEEGTCG 179

Query: 241 TDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQ 278
             K +   VTI+GY  +P                      +   FQ YS G+F+ +CG +
Sbjct: 180 EKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGIFNGHCGTE 239

Query: 279 LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           L+HGV  VGYG   G  Y  VKNSWG+ WGE GYIRM RN      GICGI   ASYP K
Sbjct: 240 LDHGVAAVGYGTSKGVDYITVKNSWGSKWGEKGYIRMKRNVGKPE-GICGIYKMASYPTK 298


>gi|297826061|ref|XP_002880913.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326752|gb|EFH57172.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 347

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/351 (41%), Positives = 204/351 (58%), Gaps = 54/351 (15%)

Query: 29  VLSLFLLW--VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIY 86
           +L++FL +   L    G   E  P         E+ E W+ +++R Y  E E + RF I+
Sbjct: 8   ILTIFLSYRTSLATSRGGLFEASPI--------EKHEQWMARFNRVYSDESEKRNRFNIF 59

Query: 87  SSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP------------- 132
             N++++   N ++N+++KL  N+F+DL++EEF +T+ G   P                 
Sbjct: 60  KKNLEFVQSFNMNKNITYKLDVNEFSDLTDEEFRATHTGLVVPEEITGISTLSSDKTVPF 119

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           R+ +V   G   S+DWR+EGAVTPVK QG+CG CWAFSAVAAVEGI K+  G+LVSLSEQ
Sbjct: 120 RYGNVSDTG--ESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSLSEQ 177

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND---RCQTDKTKHHAV 249
           +L+DCD +  NQGC+GG M KAFE+I K  G+TTED+YPY+          T  +   A 
Sbjct: 178 QLLDCDTDY-NQGCHGGIMSKAFEYIIKNQGITTEDNYPYQESQQTCSSSTTLSSSFRAA 236

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           TI+GYE +P                          F+ YS G+F+  CG  L+H VT+VG
Sbjct: 237 TISGYETVPMNNEEALLQAVSQQPVSVGIEGTGAGFRHYSGGIFNGECGTDLHHAVTIVG 296

Query: 288 YG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YG  + G KYW+VKNSWG +WGE G++R+ R+  +   G+CG+ M A YP+
Sbjct: 297 YGMSEEGTKYWVVKNSWGETWGEDGFMRIKRDVDAPQ-GMCGLAMLAFYPL 346


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 184/304 (60%), Gaps = 35/304 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           FE+W  ++ + Y S+ E  RR  I+S  + YI+  N+Q N +F L  NKF+DL+N EF +
Sbjct: 2   FEDWAAKHGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 121 TYLG-YNKPYNEPRWPS----VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            Y+G +  P  + R P+    V    LP S+DWR+EGAVTP+KDQGQCGSCWAFSA+A++
Sbjct: 62  NYVGKFKSPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAIASI 121

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           E  + L T +LVSLSEQ+L+DCD  + +QGC GG+ E AF+F+ + GGVTTE+ YPY G 
Sbjct: 122 ESAHFLATKELVSLSEQQLIDCD--TVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTGF 179

Query: 236 NDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDE 273
              C  +K K   V ITGY+ +    A                      FQ Y  G+   
Sbjct: 180 AGSCNANKNK--VVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNFQNYRSGILSG 237

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            C +  +H V V+GYG + G  YW++KNSWGTSWGE G++++ +       G+CG+  Q+
Sbjct: 238 QCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGENGFMKIKKKDGE---GMCGMNGQS 294

Query: 334 SYPV 337
           SYP 
Sbjct: 295 SYPT 298


>gi|125525815|gb|EAY73929.1| hypothetical protein OsI_01813 [Oryza sativa Indica Group]
          Length = 336

 Score =  250 bits (638), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 189/338 (55%), Gaps = 32/338 (9%)

Query: 29  VLSLFLLWV---LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           + S FLL V   + + A A S  Y    D     + FE W+ ++ + Y    E + RFGI
Sbjct: 1   MASAFLLVVCTLMALQAMAASAYYNNGSDDGVTMQMFEEWMAKFGKTYKCHGEKEHRFGI 60

Query: 86  YSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPA 144
           +  NV +I  Y         +  N+FADL+N+EF++TY G   P+ +     V  +  P 
Sbjct: 61  FRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPPHPKEAPRPVDPIWTPC 120

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
            +DWR  GAVT VKDQG CGSCWAF+AVAA+EG+ K++TG+L  LSEQELVDCD NS   
Sbjct: 121 CIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGLTKIRTGQLTPLSEQELVDCDTNS--N 178

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIP----- 258
           GC GG+ ++AFE +   GG+T E DY Y G   +C+ D    +HA +I GY A+P     
Sbjct: 179 GCGGGHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAASIGGYRAVPPNDER 238

Query: 259 ------ARY-----------AFQLYSHGVFDEYCGHQLNHGVTVVGYGED--HGEKYWLV 299
                 AR            AFQ Y  GVF   CG   NH VT+VGY +D   G+KYW+ 
Sbjct: 239 QLATAVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGYCQDGASGKKYWVA 298

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWG +WG+ GYI + ++    + G CG+ +   YP 
Sbjct: 299 KNSWGKTWGQQGYILLEKDVLQPH-GTCGLAVSPFYPT 335


>gi|944916|gb|AAA74430.1| cysteine proteinase [Mesembryanthemum crystallinum]
          Length = 367

 Score =  250 bits (638), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 190/314 (60%), Gaps = 37/314 (11%)

Query: 56  QSMEERFENWLKQYS--REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +++ + +E W   Y+  R +G   E Q RF ++  NV+YI+ +N  +  +KL  N+F DL
Sbjct: 38  ETLWDLYERWRSVYTSARSFG---EKQNRFHVFKENVKYINEVNKMDKPYKLRLNQFGDL 94

Query: 114 SNEEFISTYLG---YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +  EF  TY          NE      + + +P S+DWR +GAVTPVK+QG+CG CWAFS
Sbjct: 95  TPSEFARTYANSKIIEGTRNESGGFMYENVEVPRSIDWRVKGAVTPVKNQGRCGGCWAFS 154

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           A AAVEGIN++ TG+L+SLSEQ+L+DCD  ++N GC GG M +AFE+I + GG+T+E +Y
Sbjct: 155 AAAAVEGINQITTGQLISLSEQQLIDCD--TQNSGCRGGTMGRAFEYIKQRGGITSEANY 212

Query: 231 PYRGKNDRCQTDKTKHHAVTITGY-------EAIPARYAFQ-----------------LY 266
           PY+ +   C+ +  +   V+I GY       +A+    A Q                  Y
Sbjct: 213 PYKAQAGMCKNNLIQRPTVSIDGYYNIRRSEDAVLKILAHQPVSVAVDATTWSSLDWMFY 272

Query: 267 SHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
             GVF   CG +LNHGVT VGYG  + G  YW++KNSWG +WGE GY+RM R    S  G
Sbjct: 273 FQGVFTGPCGTKLNHGVTAVGYGTTNDGYDYWIIKNSWGETWGERGYMRMLRG--VSPYG 330

Query: 326 ICGILMQASYPVKR 339
           +CGI MQAS+P+KR
Sbjct: 331 LCGIAMQASFPIKR 344


>gi|159479072|ref|XP_001697622.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
 gi|158274232|gb|EDP00016.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
          Length = 469

 Score =  250 bits (638), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 138/312 (44%), Positives = 183/312 (58%), Gaps = 37/312 (11%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           F+ W + +SR Y ++  E++ RF ++  N++Y+   N++  S  LT N  ADLS  E+ S
Sbjct: 13  FKEWAQTHSRSYVNDVAEFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKS 72

Query: 121 TYLGY--------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
             LG+        NK     R+  V    LP ++DWRK+ AV  VK+QGQCGSCWAF+  
Sbjct: 73  KLLGFDNQARVARNKLKTGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATT 132

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            +VEGIN + TG LVSLSEQELVDCD   +++GC+GG M+ A+ +I K  G+ TE+DYPY
Sbjct: 133 GSVEGINAIVTGSLVSLSEQELVDCDT-EQDKGCSGGLMDYAYAWIIKNKGINTEEDYPY 191

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
              + +C   K K   VTI  YE +P                         +FQLY  GV
Sbjct: 192 TAMDGQCDVAKMKRRVVTIDSYEDVPENDEVALKKAAAHQPVAVAIEADAKSFQLYGGGV 251

Query: 271 FDE-YCGHQLNHGVTVVGYGED---HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           +D+  CG  LNHGV VVGYG+D    G  YW+VKNSWG  WG+AGYIR+   S  +  G+
Sbjct: 252 YDDPTCGTSLNHGVLVVGYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAE-GL 310

Query: 327 CGILMQASYPVK 338
           CGI M  SYPVK
Sbjct: 311 CGIAMAPSYPVK 322


>gi|400180419|gb|AFP73348.1| cysteine protease [Solanum lycopersicoides]
          Length = 343

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/348 (39%), Positives = 207/348 (59%), Gaps = 42/348 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKIDLMSILITLFFVISM------FNSQTTARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP-YNEPRWPSV 137
             RF I+  N+++I+ +N + NLS+KL  N+FAD+++EEF++ + G N P Y  P   S 
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGINEFADITSEEFLTKFTGINIPSYLSPSPMSS 116

Query: 138 QYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
                       +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+  
Sbjct: 117 TEFKINDLSDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEF 176

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQEL+DC  N  N GCNGG+M  AF+FI + GG+++E DY Y+G+   C++ + K  AV
Sbjct: 177 SEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISSESDYEYQGQQYTCRSQE-KTAAV 233

Query: 250 TITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
            I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GYG
Sbjct: 234 QISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGYG 293

Query: 290 EDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            D  G+KYWL+KNSWGTSWGE G++++ R+S +   G C I   +SYP
Sbjct: 294 TDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPG-GHCDIAKMSSYP 340


>gi|21070926|gb|AAM34401.1|AF377947_7 putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|31712050|gb|AAP68356.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|40538988|gb|AAR87245.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|108711126|gb|ABF98921.1| Papain family cysteine protease containing protein, expressed
           [Oryza sativa Japonica Group]
 gi|125545747|gb|EAY91886.1| hypothetical protein OsI_13535 [Oryza sativa Indica Group]
          Length = 350

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/313 (43%), Positives = 173/313 (55%), Gaps = 39/313 (12%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-----NLSFKLTDNKFADLSN 115
           R E W+ ++ + Y  E+E  RR  ++ +N + ID  N+          +L  N+FADL++
Sbjct: 41  RHEKWMAKHGKTYKDEEEKARRLEVFRANAKLIDSFNAAAEKDGGGGHRLATNRFADLTD 100

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           +EF +   GY +P          +L         P S+DWR  GAVT VKDQG CG CWA
Sbjct: 101 DEFRAARTGYQRPPAAVAGAGGGFLYENFSLAAAPQSMDWRAMGAVTGVKDQGSCGCCWA 160

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAAVEG+ K++TG+LVSLSEQELVDCDV  E+QGC GG M+ AF++I + GG+  E 
Sbjct: 161 FSAVAAVEGLAKIRTGQLVSLSEQELVDCDVRGEDQGCEGGLMDTAFQYIARRGGLAAES 220

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
            YPYRG  D          A +I G++ +P                      A Y F+ Y
Sbjct: 221 SYPYRGV-DGACRAAAGRAAASIRGFQDVPSNDEGALMAAVARQPVSVAINGAGYVFRFY 279

Query: 267 SHGVFDEY-CGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
             GV     CG +LNH VT VGYG    G  YWL+KNSWG SWGE GY+R+ R       
Sbjct: 280 DRGVLGGAGCGTELNHAVTAVGYGTASDGTGYWLMKNSWGASWGEGGYVRIRRGVGRE-- 337

Query: 325 GICGILMQASYPV 337
           G CGI   ASYPV
Sbjct: 338 GACGIAQMASYPV 350


>gi|218202077|gb|EEC84504.1| hypothetical protein OsI_31195 [Oryza sativa Indica Group]
          Length = 362

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/353 (40%), Positives = 197/353 (55%), Gaps = 49/353 (13%)

Query: 29  VLSLFLLWVLG-------IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           VL+L LL   G       +PA A + G         M +RF  W   ++R Y S +E  +
Sbjct: 12  VLTLALLASCGALLATSMLPARA-TAGSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQ 70

Query: 82  RFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRW--- 134
           RF +Y  N ++ID +N + +L+++L +N+FADL+ EEF++TY GY   + P ++      
Sbjct: 71  RFDVYRRNAEFIDAVNLRGDLTYRLAENEFADLTEEEFLATYTGYYAGDGPVDDSVITTG 130

Query: 135 -----PSVQY-LGLPASVDWRKEGAVTPVKDQ-GQCGSCWAFSAVAAVEGINKLKTGKLV 187
                 S  Y + +PASVDWR +GAV P K Q   C SCWAF   A +E +N +KTGKLV
Sbjct: 131 AGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSSCWAFVTAATIESLNMIKTGKLV 190

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDCD  S + GCN G   +A++++ + GG+TTE DYPY  +   C   K+ HH
Sbjct: 191 SLSEQQLVDCD--SYDGGCNLGSYGRAYKWVVENGGLTTEADYPYTARRGPCNRAKSAHH 248

Query: 248 AVTITGYEAIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           A  ITG+  +P R                        Q Y  GV+   CG +L H VTVV
Sbjct: 249 AAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGSGMQFYKGGVYTGPCGTRLAHAVTVV 308

Query: 287 GYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG D   G KYW +KNSWG SWGE GYIR+ R+      G+CG+ +  +YP 
Sbjct: 309 GYGTDASSGAKYWTIKNSWGQSWGERGYIRILRD--VGGPGLCGVTLDIAYPT 359


>gi|20334375|gb|AAM19208.1|AF493233_1 cysteine protease [Solanum pennellii]
          Length = 337

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/342 (39%), Positives = 207/342 (60%), Gaps = 36/342 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKIDLMSILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P +      + 
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPIN 116

Query: 139 YLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
            L    +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+  SEQEL+
Sbjct: 117 DLSDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELL 176

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  AV I+ Y+
Sbjct: 177 DCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQ 233

Query: 256 AIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GE 294
            +P                    A    Q Y+ G +D  C +++NH VT +GYG D  G+
Sbjct: 234 VVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQ 293

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 KYWLLKNSWGTSWGEDGFMKIIRDSGNP-AGLCDIAKVSSYP 334


>gi|400180422|gb|AFP73349.1| cysteine protease [Solanum chmielewskii]
          Length = 344

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/351 (41%), Positives = 208/351 (59%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF  +V+ I     + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLF--FVISI-FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QGQCG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKTNDLSDDDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q YS G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYSGGTYDGSCADRINHAVTAIGY 293

Query: 289 GED-HGEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEEGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|400180437|gb|AFP73356.1| cysteine protease [Solanum pennellii]
          Length = 337

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/342 (39%), Positives = 207/342 (60%), Gaps = 36/342 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ 138
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P +      + 
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPIN 116

Query: 139 YLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
            L    +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+  SEQEL+
Sbjct: 117 DLSDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELL 176

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  AV I+ Y+
Sbjct: 177 DCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQ 233

Query: 256 AIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GE 294
            +P                    A    Q Y+ G +D  C +++NH VT +GYG D  G+
Sbjct: 234 VVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQ 293

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 KYWLLKNSWGTSWGEDGFMKIIRDSGNP-AGLCDIAKVSSYP 334


>gi|242066206|ref|XP_002454392.1| hypothetical protein SORBIDRAFT_04g029960 [Sorghum bicolor]
 gi|241934223|gb|EES07368.1| hypothetical protein SORBIDRAFT_04g029960 [Sorghum bicolor]
          Length = 356

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 186/314 (59%), Gaps = 32/314 (10%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           P  +   F++W  ++ + Y S  E  +R+GI+  N+ +I   N +N S+ L  N+FAD++
Sbjct: 38  PNRLVNLFKSWSVKHRKIYVSPKEKLKRYGIFKQNLMHIAETNRKNGSYWLGLNQFADIT 97

Query: 115 NEEFISTYLGYNKPYN----EPRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           +EEF + +LG  +  +    + R P+         LP SVDWR +GAVTPVK+QG+CGSC
Sbjct: 98  HEEFKANHLGLKQGLSRMGAQTRTPTTFRYAAAANLPWSVDWRYKGAVTPVKNQGKCGSC 157

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS+VAAVEGIN++ TGKLVSLSEQEL+DCD   ++ GC GG M+ AF +I    G+  
Sbjct: 158 WAFSSVAAVEGINQIVTGKLVSLSEQELMDCDTMLDH-GCEGGLMDFAFAYIMGSQGIHA 216

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           EDDYPY  +   C+  +   + VTITGYE +P                          FQ
Sbjct: 217 EDDYPYLMEEGYCKEKQPYANVVTITGYEDVPENSEISLLKALAHQPVSVGIAAGSRDFQ 276

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            Y  GVFD  C  +L+H +T VGYG  +G+ Y  +KNSWG +WGE GY+R+   +     
Sbjct: 277 FYKGGVFDGSCSDELDHALTAVGYGSSYGQNYITMKNSWGKNWGEQGYVRIKMGTGKPE- 335

Query: 325 GICGILMQASYPVK 338
           G+CGI   ASYPVK
Sbjct: 336 GVCGIYTMASYPVK 349


>gi|413953051|gb|AFW85700.1| hypothetical protein ZEAMMB73_033873 [Zea mays]
          Length = 359

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/361 (41%), Positives = 200/361 (55%), Gaps = 47/361 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M M   +A L+L +L+   +        +        + ERF+ W  +Y+R Y + +E+Q
Sbjct: 1   MTMATASASLALVMLFACSLLLAG--TAFSDDTIAIPLLERFKAWQAEYNRTYATPEEFQ 58

Query: 81  RRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYL---GYNKPYNEPRWP 135
           +RF +YS N+++I  +N  S   S++L +N+F DL+ EEF  TYL       P  E   P
Sbjct: 59  QRFMVYSENLRFIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMPP 118

Query: 136 SVQYLGL------------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
            V  +              P SVDWR +GAVTPVK+Q QCGSCWAF+ VA++EG++++KT
Sbjct: 119 IVGTMSTAGMSNGDNTGEAPNSVDWRTKGAVTPVKNQQQCGSCWAFATVASIEGVHQIKT 178

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G+LVSLSEQE+VDCD    + GC GGY   A E++T+ GG+TTE DYPY G   +C + K
Sbjct: 179 GRLVSLSEQEIVDCDRGGNDHGCRGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGK 238

Query: 244 TKHHAVTITGYEA---------------------IPARYAFQLYSHGVFDEYCG-HQLNH 281
             HHA  I GY+A                     I A  AFQ Y  GVF   C    +NH
Sbjct: 239 LGHHAARIRGYQAVQRKNEAELERAVAGRPVAVVIDASRAFQFYKRGVFSGPCNTTTVNH 298

Query: 282 GVTVV-----GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            VTVV     G     G KYW+VKNSWG  WGE GY+RMAR   +   G+C I ++  YP
Sbjct: 299 AVTVVGYGSAGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRARE-GMCAIAIEPYYP 357

Query: 337 V 337
           V
Sbjct: 358 V 358


>gi|115478933|ref|NP_001063060.1| Os09g0381400 [Oryza sativa Japonica Group]
 gi|113631293|dbj|BAF24974.1| Os09g0381400 [Oryza sativa Japonica Group]
 gi|215678649|dbj|BAG92304.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218202075|gb|EEC84502.1| hypothetical protein OsI_31193 [Oryza sativa Indica Group]
          Length = 362

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/353 (40%), Positives = 197/353 (55%), Gaps = 49/353 (13%)

Query: 29  VLSLFLLWVLG-------IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           VL+L LL   G       +PA A + G         M +RF  W   ++R Y S +E  +
Sbjct: 12  VLTLALLASCGALLATSMLPARA-TAGSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQ 70

Query: 82  RFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRW--- 134
           RF +Y  N ++ID +N + +L+++L +N+FADL+ EEF++TY GY   + P ++      
Sbjct: 71  RFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYAGDGPVDDSVITTG 130

Query: 135 -----PSVQY-LGLPASVDWRKEGAVTPVKDQ-GQCGSCWAFSAVAAVEGINKLKTGKLV 187
                 S  Y + +PASVDWR +GAV P K Q   C SCWAF   A +E +N +KTGKLV
Sbjct: 131 AGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSSCWAFVTAATIESLNMIKTGKLV 190

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDCD  S + GCN G   +A++++ + GG+TTE DYPY  +   C   K+ HH
Sbjct: 191 SLSEQQLVDCD--SYDGGCNLGSYGRAYKWVVENGGLTTEADYPYTARRGPCNRAKSAHH 248

Query: 248 AVTITGYEAIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           A  ITG+  +P R                        Q Y  GV+   CG +L H VTVV
Sbjct: 249 AAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGSGMQFYKGGVYTGPCGTRLAHAVTVV 308

Query: 287 GYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG D   G KYW +KNSWG SWGE GYIR+ R+      G+CG+ +  +YP 
Sbjct: 309 GYGTDASSGAKYWTIKNSWGQSWGERGYIRILRD--VGGPGLCGVTLDIAYPT 359


>gi|297602242|ref|NP_001052232.2| Os04g0203500 [Oryza sativa Japonica Group]
 gi|255675217|dbj|BAF14146.2| Os04g0203500 [Oryza sativa Japonica Group]
          Length = 336

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/313 (42%), Positives = 180/313 (57%), Gaps = 35/313 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +NV +I+  N+ N  F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADL 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF ST        +  R P+      V    LPA++DWR +G VTP+KDQGQCG CW
Sbjct: 89  TNDEFRSTKTNKGFIPSTTRVPTGFRNENVNIDALPATMDWRTKGVVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+EGI KL TGKL+S S  + +   +   + GC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAMEGIVKLSTGKLISHSLNKSL---LTVMSMGCEGGLMDDAFKFIIKNGGLTTE 205

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+ ++    +   +I GYE +PA                         FQ 
Sbjct: 206 SNYPYAAVDDKFKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQF 263

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWG +WGE G++RM ++  S   
Sbjct: 264 YKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGMTWGENGFLRMEKD-ISDKR 322

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 323 GMCGLAMEPSYPT 335


>gi|400180441|gb|AFP73357.1| cysteine protease [Solanum habrochaites]
          Length = 344

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/351 (38%), Positives = 210/351 (59%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN-------- 130
             RF I+  N+++I+ +N + NLS+KL  N+FAD+++EEF++ + G N P +        
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAKFTGLNIPNSYLSPSPMS 116

Query: 131 --EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
             E +   +    +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDISDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIRENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C +++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCANRINHAVTAIGY 293

Query: 289 GED-HGEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D +G+KYWL+KNSWGTSWGE G++++ R+  +PS   G+C I   +SYP
Sbjct: 294 GTDENGQKYWLLKNSWGTSWGEKGFMKIIRDYGNPS---GLCDIAKLSSYP 341


>gi|49387634|dbj|BAD25828.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|49388888|dbj|BAD26098.1| putative cysteine proteinase [Oryza sativa Japonica Group]
          Length = 358

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/353 (40%), Positives = 197/353 (55%), Gaps = 49/353 (13%)

Query: 29  VLSLFLLWVLG-------IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           VL+L LL   G       +PA A + G         M +RF  W   ++R Y S +E  +
Sbjct: 8   VLTLALLASCGALLATSMLPARA-TAGSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQ 66

Query: 82  RFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRW--- 134
           RF +Y  N ++ID +N + +L+++L +N+FADL+ EEF++TY GY   + P ++      
Sbjct: 67  RFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYAGDGPVDDSVITTG 126

Query: 135 -----PSVQY-LGLPASVDWRKEGAVTPVKDQ-GQCGSCWAFSAVAAVEGINKLKTGKLV 187
                 S  Y + +PASVDWR +GAV P K Q   C SCWAF   A +E +N +KTGKLV
Sbjct: 127 AGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSSCWAFVTAATIESLNMIKTGKLV 186

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDCD  S + GCN G   +A++++ + GG+TTE DYPY  +   C   K+ HH
Sbjct: 187 SLSEQQLVDCD--SYDGGCNLGSYGRAYKWVVENGGLTTEADYPYTARRGPCNRAKSAHH 244

Query: 248 AVTITGYEAIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           A  ITG+  +P R                        Q Y  GV+   CG +L H VTVV
Sbjct: 245 AAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGSGMQFYKGGVYTGPCGTRLAHAVTVV 304

Query: 287 GYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG D   G KYW +KNSWG SWGE GYIR+ R+      G+CG+ +  +YP 
Sbjct: 305 GYGTDASSGAKYWTIKNSWGQSWGERGYIRILRD--VGGPGLCGVTLDIAYPT 355


>gi|302781881|ref|XP_002972714.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
 gi|300159315|gb|EFJ25935.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
          Length = 446

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 180/315 (57%), Gaps = 36/315 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEW-QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSN 115
           +   + +W  ++ +E  S +    RRF  +  N +YI+  N +   S++L  N+F+DL++
Sbjct: 9   LSGEYASWCAKFGKECASSNSLGDRRFETFKENFRYIEEHNRAGKHSYRLGLNQFSDLTS 68

Query: 116 EEFISTYLGYNK----------PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EEF   +LG             P +       Q + LPASVDWRK GAVT  KDQG CG 
Sbjct: 69  EEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRKHGAVTAPKDQGSCGG 128

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAF+   A+EGIN++ TG+L+SLSEQEL+DCD  ++ +GC+GG ME A++FI + GG+ 
Sbjct: 129 CWAFATTGAIEGINQIVTGQLMSLSEQELIDCDKKAD-KGCDGGLMENAYQFIVENGGLD 187

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAF 263
           TE DYPY      C   K     V I GYEAIP                      A   F
Sbjct: 188 TETDYPYHASESHCNMKKLNSRVVAIDGYEAIPDGDEQALLRAVAKQPVSVAIEGASKDF 247

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Q Y+ GVF  +CG ++NHGV +VGYG + G  YW+VKNSW  +WG+ G+++M RN+    
Sbjct: 248 QHYASGVFTGHCGEEINHGVLIVGYGTEDGLDYWIVKNSWAATWGDGGFVKMQRNTGKRG 307

Query: 324 IGICGILMQASYPVK 338
            G+C I   ASYPVK
Sbjct: 308 -GLCSINTLASYPVK 321


>gi|400180371|gb|AFP73324.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 209/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180383|gb|AFP73330.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 209/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180393|gb|AFP73335.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 207/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  VERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
              L         +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STELKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|449500383|ref|XP_004161083.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 345

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 35/314 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + +E W K ++     +++  +RF ++  NV ++  +N  +  +KL  NKFAD+SN
Sbjct: 35  ESLWQLYERWGKHHTISRNLKEK-HKRFSVFKENVNHVFTVNQMDKPYKLKLNKFADMSN 93

Query: 116 EEFISTYLGYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
            EF++ Y   N    +  +E R  +  ++      LP+SVD R+ GAV  VK+QG+CGSC
Sbjct: 94  YEFVNFYARSNISHYRKLHERRRGAGGFMYEQDTDLPSSVDGRERGAVNAVKEQGRCGSC 153

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS+VAAVEGINK+KT +L+SLSEQEL+DC  N  N+GCNGG+ME AF+FI + GG+ T
Sbjct: 154 WAFSSVAAVEGINKIKTNQLLSLSEQELLDC--NYRNKGCNGGFMEIAFDFIKRNGGIAT 211

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQL 265
           E+ YPY G    C++ +     V I GYE++P                     A   FQ 
Sbjct: 212 ENSYPYHGSRGLCRSSRISSPIVKIDGYESVPENEDALMQAVANQPVSVAIDAAGRDFQF 271

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GVFD YCG +LNHGV  +GYG  + G  YWLV+NSWG  WGE GY+RM R    +  
Sbjct: 272 YSQGVFDGYCGTELNHGVVAIGYGTTEDGTDYWLVRNSWGVGWGEDGYVRMKRGVEQAE- 330

Query: 325 GICGILMQASYPVK 338
           G+CGI M+ASYP+K
Sbjct: 331 GLCGIAMEASYPIK 344


>gi|400180361|gb|AFP73319.1| cysteine protease [Solanum peruvianum]
 gi|400180397|gb|AFP73337.1| cysteine protease [Solanum peruvianum]
 gi|400180401|gb|AFP73339.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 209/351 (59%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDITKMSSYP 341


>gi|400180399|gb|AFP73338.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 209/351 (59%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|242093994|ref|XP_002437487.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
 gi|241915710|gb|EER88854.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
          Length = 341

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 182/302 (60%), Gaps = 27/302 (8%)

Query: 60  ERFENWLKQYSREYGSEDEWQR---------RFGIYSSNVQYIDYINSQN----LSFKLT 106
           ER +  ++Q  + + SE    R         R  ++  N++YID  N++      +F+L 
Sbjct: 41  ERADEEVRQLYKTWKSEHGRPRDGISVADGLRLKVFRDNLRYIDAHNAEADAGLHTFRLG 100

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQG 161
              F DL+ EEF +  LG+      PR  S +YL      LP +VDWR++GAVT VK+Q 
Sbjct: 101 LTPFTDLTLEEFRAHALGFLNS-TLPRVASDRYLPRAGDDLPDAVDWRQQGAVTGVKNQL 159

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CG CWAFSAVAA+EGINK+ T  L+SLSEQEL+DCD  +E+ GC GG M+KAF+F+   
Sbjct: 160 DCGGCWAFSAVAAMEGINKIVTNNLISLSEQELIDCD--TEDYGCQGGEMQKAFQFVIDN 217

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSH-----GVFDEYCG 276
           GG+ TE DYP+ G N  C   + K   V+I  YE +P      L        G+F+  CG
Sbjct: 218 GGIDTEADYPFIGTNGTCDAIREKRKVVSIDSYENVPTNDEEALQKAVANQPGIFNGPCG 277

Query: 277 HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
             L+HGVT VGYG D+GE +W+VKNSWG  WGE+GYIRM RN     +G CGI M ASYP
Sbjct: 278 FILDHGVTAVGYGSDNGEDFWIVKNSWGAEWGESGYIRMKRNVLLP-MGKCGIAMYASYP 336

Query: 337 VK 338
           VK
Sbjct: 337 VK 338


>gi|400180377|gb|AFP73327.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 207/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PELSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y+G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYQGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|326520387|dbj|BAK07452.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/315 (45%), Positives = 185/315 (58%), Gaps = 42/315 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNE 116
           M +RF  W   ++R Y S +E  RRF +Y +NV+YID  N +  L+++L +N+FADL+ E
Sbjct: 41  MMDRFRQWQATHNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGE 100

Query: 117 EFISTYLG-------YNKPYNEPRWPSVQYLGL-----PASVDWRKEGAVTPVKDQG-QC 163
           EF++ Y G             +  W S    G      PASVDWR +GAVTPVK+QG QC
Sbjct: 101 EFLARYAGGHTGSAITTAAEADGLWSSGGSDGSLEADPPASVDWRAKGAVTPVKNQGSQC 160

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
            SCWAFSAVA +E +  +KTGKLV+LSEQ+LVDCD    + GCN GY  +AF++I + GG
Sbjct: 161 YSCWAFSAVATMESLYFIKTGKLVALSEQQLVDCD--KYDGGCNKGYYHRAFQWIMENGG 218

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------AR----------YAF 263
           +TT   YPY+     C   K    AVTITG+ A+           AR           + 
Sbjct: 219 ITTAAQYPYKAVRGACSAAKP---AVTITGHLAVAKNELALQSAVARQPIGVAIEVPISM 275

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Q Y  GVF   CG Q++H V  VGYG D  G KYWLVKNSWG +WGEAGYIRM R+    
Sbjct: 276 QFYKSGVFSAACGIQMSHAVVTVGYGADASGLKYWLVKNSWGQTWGEAGYIRMRRDVGGG 335

Query: 323 NIGICGILMQASYPV 337
             G+CGI +  +YP 
Sbjct: 336 --GLCGIALDTAYPT 348


>gi|20334377|gb|AAM19209.1|AF493234_1 cysteine protease [Solanum lycopersicum]
 gi|400180431|gb|AFP73353.1| cysteine protease [Solanum lycopersicum]
          Length = 345

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/352 (39%), Positives = 207/352 (58%), Gaps = 48/352 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYN--------KPYN 130
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N         P +
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 131 EPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
              +  +  L    +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+
Sbjct: 117 STEFKKINDLSDDYMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLM 176

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
             SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  
Sbjct: 177 EFSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTA 233

Query: 248 AVTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           AV I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +G
Sbjct: 234 AVQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGNCADRINHAVTAIG 293

Query: 288 YGED-HGEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           YG D  G+KYWL+KNSWGTSWGE GY+++ R+S  PS   G+C I   +SYP
Sbjct: 294 YGTDEEGQKYWLLKNSWGTSWGENGYMKIIRDSGDPS---GLCDIAKMSSYP 342


>gi|400180457|gb|AFP73365.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 209/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|326497561|dbj|BAK05870.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 340

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/306 (46%), Positives = 182/306 (59%), Gaps = 33/306 (10%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNE 116
           M +RF  W   ++R Y S +E  RRF +Y +NV+YID  N +  L+++L +N+FADL+ E
Sbjct: 41  MMDRFRQWQATHNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGE 100

Query: 117 EFISTYLGYNKP---YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCWAFSAV 172
           EF++ Y G +                   PASVDWR +GAVTPVK+QG QC SCWAFSAV
Sbjct: 101 EFLARYAGGHTGSAITTAAEADGSLEADPPASVDWRAKGAVTPVKNQGSQCYSCWAFSAV 160

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           A +E +  +KTGKLV+LSEQ+LVDCD    + GCN GY  +AF++I + GG+TT   YPY
Sbjct: 161 ATMESLYFIKTGKLVALSEQQLVDCD--KYDGGCNKGYYHRAFQWIMENGGITTAAQYPY 218

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP----------AR----------YAFQLYSHGVFD 272
           +     C   K    AVTITG+ A+           AR           + Q Y  GVF 
Sbjct: 219 KAVRGACSAAKP---AVTITGHLAVAKNELALQSAVARQPIGVAIEVPISMQFYKSGVFS 275

Query: 273 EYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             CG Q++H V  VGYG D  G KYWLVKNSWG +WGEAGYIRM R+      G+CGI +
Sbjct: 276 AACGIQMSHAVVTVGYGADASGLKYWLVKNSWGQTWGEAGYIRMRRDVGGG--GLCGIAL 333

Query: 332 QASYPV 337
             +YP 
Sbjct: 334 DTAYPT 339


>gi|400180353|gb|AFP73315.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/348 (39%), Positives = 206/348 (59%), Gaps = 41/348 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M++ L N +++LF +  +       + G  Q     S+ ER E W+ ++ R Y  E E  
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQP--KLSVSERHELWMSRHGRVYKDEVEKG 57

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WPS 136
            RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    S
Sbjct: 58  ERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSS 117

Query: 137 VQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
            +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+  
Sbjct: 118 TEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEF 177

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  AV
Sbjct: 178 SEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAV 234

Query: 250 TITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
            I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GYG
Sbjct: 235 QISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGYG 294

Query: 290 EDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 295 TDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNP-AGLCDIAKMSSYP 341


>gi|307103885|gb|EFN52142.1| hypothetical protein CHLNCDRAFT_139276 [Chlorella variabilis]
          Length = 388

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 182/301 (60%), Gaps = 23/301 (7%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           + F  W   + R Y S  E ++R  ++  N +++   N++N    L  N+FADL+ EEF 
Sbjct: 44  QAFSQWQMTHGRSYKSASEARKRQAVFVENAKHVAEQNARNSGLVLALNQFADLTLEEFA 103

Query: 120 STYLGYNKPYNEPR---WPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           +T+LGYN    E +     S QY     LP++VDWRK+ AVTPVK+Q  CGSCWAFSA  
Sbjct: 104 ATHLGYNPSLREGKEHTTTSFQYADANDLPSTVDWRKKNAVTPVKNQAMCGSCWAFSATG 163

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN ++TGKLVSLSEQ+LVDCD + ++ GC GG M+ AF++ITK GG+ +EDDY Y 
Sbjct: 164 AVEGINAIRTGKLVSLSEQQLVDCD-SEKDLGCGGGLMDFAFDYITKNGGIDSEDDYSYW 222

Query: 234 GKNDRCQTDK-TKHHAVTITGYEAIP-----------ARYAFQLYSHGVF-DEYCGHQLN 280
           G    CQ  K    H VTI G+E +P           A     LY  GV  D+ C   LN
Sbjct: 223 GYGLICQRRKEADRHVVTIDGFEDVPKNDGEALKKAIAHQPVSLYHSGVVGDDACCQDLN 282

Query: 281 HGVTVVGY--GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           HGV  VGY  G   G  ++++KNSWG  WGE G+ R+A  S  ++ G CG+   ASYP+K
Sbjct: 283 HGVLAVGYDDGSKGGTPHYVIKNSWGEGWGEQGFFRLAAKSSEAS-GACGVYKAASYPLK 341

Query: 339 R 339
           +
Sbjct: 342 K 342


>gi|400180435|gb|AFP73355.1| cysteine protease [Solanum pennellii]
          Length = 344

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/349 (38%), Positives = 207/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYVSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK+QGQCG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C +++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCANRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGEDGFMKIIRDSGNP-AGLCDIAKVSSYP 341


>gi|641905|gb|AAC49406.1| cysteine proteinase [Zinnia violacea]
          Length = 342

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/334 (41%), Positives = 191/334 (57%), Gaps = 37/334 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYP-QKYDPQSME------ERFENWLKQYSREY 73
           M  +  +   S FL   +G     +S  +    Y P+ +         FE+ L ++S+ Y
Sbjct: 1   MAFIFSSKKTSAFLCICIGFGMFGFSHEFSILGYAPEDLTSIHKVIHLFESSLVKHSKIY 60

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
            S DE   RF I+  N+++ID  N +  ++ L  N+FADL++EEF + +LG+     E +
Sbjct: 61  ESFDEKLHRFEIFMDNLKHIDETNKKVSNYWLGLNEFADLTHEEFKNKFLGFKGELAERK 120

Query: 134 WPSVQ------YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             S++      ++ LP SVDWRK+GAV+PVK+QGQCGSCWAFS VAAVEGIN++ TG L 
Sbjct: 121 DESIEQFRYRDFVDLPKSVDWRKKGAVSPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLT 180

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
            LSEQEL+DCD  + N GCNGG M+ AF ++T+  G+  E++YPY      C   +    
Sbjct: 181 VLSEQELIDCDT-TFNNGCNGGLMDYAFAYVTR-NGLHKEEEYPYIMSEGTCDEKRDASE 238

Query: 248 AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTV 285
            VTI+GY  +P                      +   FQ YS GVFD +CG +L+HGV  
Sbjct: 239 KVTISGYHDVPRNNEDSFLKALANQPISVAIEASGRDFQFYSGGVFDGHCGTELDHGVAA 298

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
           VGYG   G  Y +V+NSWG  WGE GYIRM RN+
Sbjct: 299 VGYGTSKGLDYVIVRNSWGPKWGEKGYIRMKRNT 332


>gi|18401420|ref|NP_565649.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|4314384|gb|AAD15594.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17381154|gb|AAL36389.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|20465849|gb|AAM20029.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|330252901|gb|AEC07995.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 348

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 192/317 (60%), Gaps = 41/317 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEF 118
           E+ E W+ +++R Y  E E + RF I+  N++++   N  N +++K+  N+F+DL++EEF
Sbjct: 33  EKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITYKVDINEFSDLTDEEF 92

Query: 119 ISTYLGYNKPYNEPRWPSV---------QYLGLP---ASVDWRKEGAVTPVKDQGQCGSC 166
            +T+ G   P    R  ++         +Y  +     S+DWR+EGAVTPVK QG+CG C
Sbjct: 93  RATHTGLVVPEAITRISTLSSGKNTVPFRYGNVSDNGESMDWRQEGAVTPVKYQGRCGGC 152

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAVAAVEGI K+  G+LVSLSEQ+L+DCD +  NQGC GG M KAFE+I K  G+TT
Sbjct: 153 WAFSAVAAVEGITKITKGELVSLSEQQLLDCDRDY-NQGCRGGIMSKAFEYIIKNQGITT 211

Query: 227 EDDYPYRGKND---RCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           ED+YPY+          T  +   A TI+GYE +P                         
Sbjct: 212 EDNYPYQESQQTCSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQPVSVGIEGTGA 271

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           AF+ YS GVF+  CG  L+H VT+VGYG  + G KYW+VKNSWG +WGE GY+R+ R+  
Sbjct: 272 AFRHYSGGVFNGECGTDLHHAVTIVGYGMSEEGTKYWVVKNSWGETWGENGYMRIKRDVD 331

Query: 321 SSNIGICGILMQASYPV 337
           +   G+CG+ + A YP+
Sbjct: 332 APQ-GMCGLAILAFYPL 347


>gi|242068363|ref|XP_002449458.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
 gi|241935301|gb|EES08446.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
          Length = 350

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 199/354 (56%), Gaps = 41/354 (11%)

Query: 19  IDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQK-YDPQSMEERFENWLKQYSREYGSED 77
           I  + M+     +L +L V+ +   A         Y  ++M+ R + W+ ++ R Y  E 
Sbjct: 5   IGNKTMITFTAAALMILAVMTMVVEARDLSTSTGGYGEEAMKVRHQQWMAEHGRTYKDEA 64

Query: 78  EWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWP 135
           E  RRF ++ +N  ++D  N+    S++L  N+FAD++N+EF++ Y G    P    +  
Sbjct: 65  EKARRFQVFKANADFVDRSNAAGGKSYELAINEFADMTNDEFVAMYTGLKPVPAGPKKMA 124

Query: 136 SVQYLGLPAS------VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
             +Y  L  S      VDWR++GAVT +K+QGQCG CWAF+AVAAVE I+++ TG LVSL
Sbjct: 125 GFKYENLTLSDVDQQAVDWRQKGAVTGIKNQGQCGCCWAFAAVAAVESIHQITTGNLVSL 184

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ+++DCD +  N GCNGGY++ AF++I   GG+ TED YPY      CQ+  +   AV
Sbjct: 185 SEQQVLDCDTDGNN-GCNGGYIDNAFQYIISNGGLATEDAYPYAAAQGTCQS--SVQPAV 241

Query: 250 TITGYEAIP---------------------ARYAFQLYSHGVFD-EYCGH-QLNHGVTVV 286
           TI+ Y+ +P                     A   FQ YS GV   + CG   LNH VT V
Sbjct: 242 TISSYQDVPSGDEAALAAAVANQPVAVAIDAHNNFQFYSSGVLTADTCGTPSLNHAVTAV 301

Query: 287 GYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           GY   + G  YWL+KN WG +WGE GY+R+ R + +     CG+  QASYPV R
Sbjct: 302 GYSTAEDGTPYWLLKNQWGQNWGEGGYLRVERGTNA-----CGVAQQASYPVAR 350


>gi|400180453|gb|AFP73363.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/349 (38%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM------FNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPVS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180426|gb|AFP73351.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 207/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D +G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDENGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180428|gb|AFP73352.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/349 (38%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM------FNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180407|gb|AFP73342.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  VERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|38345188|emb|CAE03344.2| OSJNBb0005B05.11 [Oryza sativa Japonica Group]
 gi|125589403|gb|EAZ29753.1| hypothetical protein OsJ_13812 [Oryza sativa Japonica Group]
          Length = 323

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 176/313 (56%), Gaps = 48/313 (15%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  +M  R E W+ QY R Y  + E  RRF ++ +NV +I+  N+ N  F L  N+FADL
Sbjct: 29  DDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADL 88

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +N+EF ST        +  R P+      V    LPA++DWR +G VTP+KDQGQCG CW
Sbjct: 89  TNDEFRSTKTNKGFIPSTTRVPTGFRNENVNIDALPATMDWRTKGVVTPIKDQGQCGCCW 148

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAA+E                ELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE
Sbjct: 149 AFSAVAAME----------------ELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTE 192

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQL 265
            +YPY   +D+ ++    +   +I GYE +PA                         FQ 
Sbjct: 193 SNYPYAAVDDKFKS--VSNSVASIKGYEDVPANNEAALMKAVANQPVSVAVDGGDMTFQF 250

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV    CG  L+HG+  +GYG+   G KYWL+KNSWG +WGE G++RM ++  S   
Sbjct: 251 YKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGMTWGENGFLRMEKD-ISDKR 309

Query: 325 GICGILMQASYPV 337
           G+CG+ M+ SYP 
Sbjct: 310 GMCGLAMEPSYPT 322


>gi|357507505|ref|XP_003624041.1| Cysteine proteinase [Medicago truncatula]
 gi|355499056|gb|AES80259.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 178/311 (57%), Gaps = 27/311 (8%)

Query: 51  QKYDPQ-SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDN 108
           Q+ DP  S+ ERFE W  +Y   Y    E ++ F I+  NV YIDY N+  N  +KL  N
Sbjct: 30  QENDPSLSLSERFEYWKTKYGVVYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYKLAIN 89

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           +F D   E+    +           +       +PA+VDWRK GAVTP+K+QG+CGSCWA
Sbjct: 90  RFVDKPIEDSDDGFERTTTTTPTTTFKYENVTDIPATVDWRKRGAVTPIKNQGKCGSCWA 149

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAA+EGI K+ +G LVSLSEQ+LVDCD +   +GC+ G M  AF+FI + GG+ TE 
Sbjct: 150 FSAVAAIEGIQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILENGGIATEA 209

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA---------------------RYAFQLYS 267
           +YPY  K     T K   H V I  YE +P+                     R  F+ YS
Sbjct: 210 NYPY--KRVVKGTCKKVSHKVQIKSYEEVPSNSEDSLLKAVANQPVSVGIDMRGMFKFYS 267

Query: 268 HGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            G+F   CG + NH +T+VGYG    G KYWLVKNSW   WGE GYIR+ R+  +   G+
Sbjct: 268 SGIFTGECGTKPNHALTIVGYGTSKDGIKYWLVKNSWSKRWGEKGYIRIKRDIDAKE-GL 326

Query: 327 CGILMQASYPV 337
           CGI M+ SYP+
Sbjct: 327 CGIAMKPSYPI 337


>gi|400180365|gb|AFP73321.1| cysteine protease [Solanum peruvianum]
 gi|400180395|gb|AFP73336.1| cysteine protease [Solanum peruvianum]
 gi|400180405|gb|AFP73341.1| cysteine protease [Solanum peruvianum]
 gi|400180409|gb|AFP73343.1| cysteine protease [Solanum peruvianum]
 gi|400180411|gb|AFP73344.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|125570286|gb|EAZ11801.1| hypothetical protein OsJ_01675 [Oryza sativa Japonica Group]
          Length = 319

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 131/304 (43%), Positives = 176/304 (57%), Gaps = 29/304 (9%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEF 118
           + FE W+ ++ + Y    E + RFGI+  NV +I  Y         +  N+FADL+N+EF
Sbjct: 18  QMFEEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEF 77

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
           ++TY G   P+ +     V  +  P  +DWR  GAVT VKDQG CGSCWAF+AVAA+EG+
Sbjct: 78  VATYTGAKPPHPKEAPRPVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGL 137

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
            K++TG+L  LSEQELVDCD NS   GC GG+ ++AFE +   GG+T E DY Y G   +
Sbjct: 138 TKIRTGQLTPLSEQELVDCDTNS--NGCGGGHTDRAFELVASKGGITAESDYRYEGFQGK 195

Query: 239 CQTDKTK-HHAVTITGYEAIP-----------ARY-----------AFQLYSHGVFDEYC 275
           C+ D    +HA +I GY A+P           AR            AFQ Y  GVF   C
Sbjct: 196 CRVDDMLFNHAASIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPC 255

Query: 276 GHQLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           G   NH VT+VGY +D   G+KYWL KNSWG +WG+ GYI + ++    + G CG+ +  
Sbjct: 256 GASSNHAVTLVGYCQDGASGKKYWLAKNSWGKTWGQQGYILLEKDIVQPH-GTCGLAVSP 314

Query: 334 SYPV 337
            YP 
Sbjct: 315 FYPT 318


>gi|302790570|ref|XP_002977052.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
 gi|300155028|gb|EFJ21661.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
          Length = 300

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 183/304 (60%), Gaps = 35/304 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           FE W  ++ + Y S+ E  RR  I+S  + YI+  N+  N +F L  NKF+DL+N EF +
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 121 TYLG-YNKPYNEPRWPS----VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            Y+G +  P  + R P+    V    LP S+DWR+EGAVTP+KDQGQCGSCWAFSA+A++
Sbjct: 62  NYVGKFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAIASI 121

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           E  + L T +LVSLSEQ+L+DCD  + +QGC GG+ E AF+F+ + GGVTTE+ YPY G 
Sbjct: 122 ESAHFLATKELVSLSEQQLIDCD--TVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTGF 179

Query: 236 NDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDE 273
              C  +K K   V ITGY+ +    A                      FQ Y  G+   
Sbjct: 180 AGSCNANKNK--VVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNFQNYRSGILSG 237

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           +C +  +H V V+GYG + G  YW++KNSWGTSWGE G++R+ +       G+CG+  Q+
Sbjct: 238 HCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMRIKKKDGE---GMCGMNGQS 294

Query: 334 SYPV 337
           SYP 
Sbjct: 295 SYPT 298


>gi|400180463|gb|AFP73368.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM------FNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|400180369|gb|AFP73323.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|302763837|ref|XP_002965340.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
 gi|302790566|ref|XP_002977050.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300155026|gb|EFJ21659.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300167573|gb|EFJ34178.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
          Length = 300

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 183/304 (60%), Gaps = 35/304 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           FE W  ++ + Y S+ E  RR  I+S  + YI+  N+  N +F L  NKF+DL+N EF +
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 121 TYLG-YNKPYNEPRWPS----VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            Y+G +  P  + R P+    V    LP S+DWR+EGAVTP+KDQGQCGSCWAFSA+A++
Sbjct: 62  NYVGKFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAIASI 121

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           E  + L T +LVSLSEQ+L+DCD  + +QGC GG+ E AF+F+ + GGVTTE+ YPY G 
Sbjct: 122 ESAHFLATKELVSLSEQQLIDCD--TVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTGF 179

Query: 236 NDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDE 273
              C  +K K   V ITGY+ +    A                      FQ Y  G+   
Sbjct: 180 AGSCNANKNK--VVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNFQNYRSGILSG 237

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           +C +  +H V V+GYG + G  YW++KNSWGTSWGE G++R+ +       G+CG+  Q+
Sbjct: 238 HCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMRIKKEDGE---GMCGMNGQS 294

Query: 334 SYPV 337
           SYP 
Sbjct: 295 SYPT 298


>gi|18408828|ref|NP_566920.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|12324451|gb|AAG52191.1|AC012329_18 putative cysteine proteinase; 15366-14136 [Arabidopsis thaliana]
 gi|6723404|emb|CAB66413.1| cysteine protease-like protein [Arabidopsis thaliana]
 gi|332645009|gb|AEE78530.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 341

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/316 (43%), Positives = 192/316 (60%), Gaps = 40/316 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSN 115
           S  E+ E W+ +++R Y  + E   RF I+++N+++++ IN + N ++ L  N+F+DL++
Sbjct: 30  SAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNLKFVESINMNTNKTYTLDVNEFSDLTD 89

Query: 116 EEFISTYLGYNKPYNEPRWP--------SVQYLGLPA---SVDWRKEGAVTPVKDQGQCG 164
           EEF + Y G   P    R          S +Y  +     S+DW +EGAVT VK Q QCG
Sbjct: 90  EEFKARYTGLVVPEGMTRISTTDSHETVSFRYENVGETGESMDWIQEGAVTSVKHQQQCG 149

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAAVEG+ K+  G+LVSLSEQ+L+DC  ++EN GC GG M KAF++I +  G+
Sbjct: 150 CCWAFSAVAAVEGMTKIANGELVSLSEQQLLDC--STENNGCGGGIMWKAFDYIKENQGI 207

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYA 262
           TTED+YPY+G    C+++     A TI+GYE +P                      + Y 
Sbjct: 208 TTEDNYPYQGAQQTCESNHLA--AATISGYETVPQNDEEALLKAVSQQPVSVAIEGSGYE 265

Query: 263 FQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           F  YS G+F+  CG QL H VT+VGYG  + G KYWL+KNSWG SWGE GY+R+ R+  S
Sbjct: 266 FIHYSGGIFNGECGTQLTHAVTIVGYGVSEEGIKYWLLKNSWGESWGENGYMRIMRDVDS 325

Query: 322 SNIGICGILMQASYPV 337
              G+CG+   A YPV
Sbjct: 326 PQ-GMCGLASLAYYPV 340


>gi|359359068|gb|AEV40975.1| putative cysteine protease [Oryza punctata]
          Length = 464

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 189/315 (60%), Gaps = 39/315 (12%)

Query: 62  FENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINSQ---NLSFKLTDNKFADLS 114
           ++ W+ ++    GS +    E++RRF ++  N++++D  N+    +  F+L  N+FADL+
Sbjct: 66  YDLWVARHRHGGGSHNGFVGEYERRFRVFWDNLKFVDAHNAHADGHGGFRLGMNRFADLT 125

Query: 115 NEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAV-TPVKDQGQCGSCWA 168
           N+EF + YLG   P    R     Y       LP SVDWR +GAV +PVK+QGQCGSCWA
Sbjct: 126 NDEFRAAYLG-TTPAGRGRHVGEMYRHDGVEALPDSVDWRDKGAVVSPVKNQGQCGSCWA 184

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSAVAAVEGINK+ TG+LVSLSEQELV+C  N  N GCNGG M+ AF FIT+ GG+ TE+
Sbjct: 185 FSAVAAVEGINKIVTGELVSLSEQELVECARNGGNSGCNGGIMDDAFAFITRNGGLDTEE 244

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY 266
           DYPY   + +C   K     V+I G+E +P                          FQLY
Sbjct: 245 DYPYTAMDGKCDLAKKSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLY 304

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
             GVF   CG  L+HGV  VGYG D   G  YW V+NSWG  WGE GYIRM RN  ++  
Sbjct: 305 DSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWGPDWGENGYIRMERNV-TART 363

Query: 325 GICGILMQASYPVKR 339
           G CGI M ASYP+K+
Sbjct: 364 GKCGIAMMASYPIKK 378


>gi|400180455|gb|AFP73364.1| cysteine protease [Solanum peruvianum]
 gi|400180459|gb|AFP73366.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|15290195|dbj|BAB63884.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|125525813|gb|EAY73927.1| hypothetical protein OsI_01811 [Oryza sativa Indica Group]
          Length = 342

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 188/339 (55%), Gaps = 30/339 (8%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           + +AVL L +  ++ + A      Y    D     + FE W+ ++ + Y    E + RFG
Sbjct: 7   MASAVL-LVVCTLMALQAMGADAYYNNGSDDGVTMQMFEEWMAKFGKTYKCHGEKEHRFG 65

Query: 85  IYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLP 143
           I+  NV +I  Y         +  N+FADL+N+EF++TY G   P+ +     V  +  P
Sbjct: 66  IFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPPHPKEAPRPVDPIWTP 125

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
             +DWR  GAVT VKDQG CGSCWAF+AVAA+EG+ K++TG+L  LSEQELVDCD NS  
Sbjct: 126 CCIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGLTKIRTGQLTPLSEQELVDCDTNS-- 183

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIP---- 258
            GC GG+ ++AFE +   GG+T E DY Y G   +C+ D    +HA  I GY A+P    
Sbjct: 184 NGCGGGHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAARIGGYRAVPPNDE 243

Query: 259 -------ARY-----------AFQLYSHGVFDEYCGHQLNHGVTVVGYGED--HGEKYWL 298
                  AR            AFQ Y  GVF   CG   NH VT+VGY +D   G+KYW+
Sbjct: 244 RQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGYCQDGASGKKYWV 303

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            KNSWG +WG+ GYI + ++    + G CG+ +   YP 
Sbjct: 304 AKNSWGKTWGQQGYILLEKDVLQPH-GTCGLAVSPFYPT 341


>gi|400180381|gb|AFP73329.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDITKMSSYP 341


>gi|400180385|gb|AFP73331.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDITKMSSYP 341


>gi|146215988|gb|ABQ10196.1| actinidin Act3a [Actinidia eriantha]
          Length = 380

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 199/351 (56%), Gaps = 40/351 (11%)

Query: 16  KIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGS 75
           K  I M ++      S FL++   I A       P + + + M   +E+WL +Y + Y S
Sbjct: 5   KSFISMSLLF----FSTFLIFSFAIDAKI----SPLRTNDEVMA-LYESWLVKYGKSYNS 55

Query: 76  EDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYN---KPYNE 131
             E + R  I+  N+++ID  N+  N S+ +  N+FADL++EE+ STYLG+    K    
Sbjct: 56  LGEREMRIEIFKENLRFIDEHNADPNRSYTVGLNQFADLTDEEYRSTYLGFKSSLKSKVS 115

Query: 132 PRW-PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
            R+ P V  + LP  VDWR  GAV  VK+QG C SCWAF+ +A VE IN++ TG L+SLS
Sbjct: 116 NRYMPQVGEV-LPDYVDWRTTGAVVDVKNQGLCSSCWAFATIATVESINQIITGDLISLS 174

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQELVDC+    N+GC GG+M+ A+EFI   GG+ TE++YPY G++D+C   K   + VT
Sbjct: 175 EQELVDCNRTPINEGCKGGFMDDAYEFIINNGGINTEENYPYIGQDDQCDEPKKNQNYVT 234

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFD-EYCGHQLNHGVTVVG 287
           I  YE +P                          F+ Y  G+F    CG  LNH VT++G
Sbjct: 235 IDSYEQVPPNDELAMKRAVAYQPVSVAIDAYCLGFRFYQSGIFTGGSCGTTLNHAVTIIG 294

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG ++G  YW+VKNS+GT WGE+GY ++ RN      G CGI     YPVK
Sbjct: 295 YGTENGIDYWIVKNSYGTQWGESGYGKVQRNVGGE--GRCGIASYPFYPVK 343


>gi|400180389|gb|AFP73333.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|302763109|ref|XP_002964976.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|302763113|ref|XP_002964978.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
 gi|300167209|gb|EFJ33814.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|300167211|gb|EFJ33816.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
          Length = 300

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/304 (43%), Positives = 185/304 (60%), Gaps = 35/304 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIS 120
           FE+W  ++ + Y S+ E  RR  ++S  + YI+  N+Q N +F L  NKF+DL+N EF +
Sbjct: 2   FEDWAAKHDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 121 TYLG-YNKPYNEPRWPS----VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            Y+G +  P  + R P+    V    LP S+DWR+EGAVTP+KDQGQCGSCWAFSA+A++
Sbjct: 62  NYVGKFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAIASI 121

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           E  + L T +LVSLSEQ+L+DCD  + +QGC GG+ + AF+F+ + GGVTTE+ YPY G 
Sbjct: 122 ESAHFLATKELVSLSEQQLIDCD--TVDQGCQGGFPDDAFKFVVENGGVTTEEAYPYTGF 179

Query: 236 NDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVFDE 273
              C T+K K   V ITGY+ +    A                      FQ Y  G+   
Sbjct: 180 AGSCNTNKNK--VVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNFQNYRSGILSG 237

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            C +  +H V V+GYG + G  YW++KNSWGTSWGE G++++ +       G+CG+  Q+
Sbjct: 238 QCCNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMKIKKKDGE---GMCGMNGQS 294

Query: 334 SYPV 337
           SYP 
Sbjct: 295 SYPT 298


>gi|237844793|ref|XP_002371694.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|50313163|gb|AAT74529.1| toxopain-2 [Toxoplasma gondii]
 gi|89242977|gb|ABD64744.1| cathepsin L [Toxoplasma gondii]
 gi|95007485|emb|CAJ20707.1| toxopain-2 [Toxoplasma gondii RH]
 gi|211969358|gb|EEB04554.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|221480879|gb|EEE19300.1| cysteine protease, putative [Toxoplasma gondii GT1]
 gi|221501596|gb|EEE27366.1| cysteine protease, putative [Toxoplasma gondii VEG]
          Length = 422

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 181/333 (54%), Gaps = 49/333 (14%)

Query: 41  PAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN 100
           PA  W      ++     ++ F ++   Y++ Y +E+E QRR+ I+ +N+ YI   N Q 
Sbjct: 102 PANIW------EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG 155

Query: 101 LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG------------LPASVDW 148
            S+ L  N F DLS +EF   YLG+ K  N        +LG            LPA VDW
Sbjct: 156 YSYSLKMNHFGDLSRDEFRRKYLGFKKSRN----LKSHHLGVATELLNVLPSELPAGVDW 211

Query: 149 RKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG 208
           R  G VTPVKDQ  CGSCWAFS   A+EG +  KTGKLVSLSEQEL+DC     NQ C+G
Sbjct: 212 RSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSG 271

Query: 209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------- 260
           G M  AF+++   GG+ +ED YPY  +++ C+  ++    V I G++ +P R        
Sbjct: 272 GEMNDAFQYVLDSGGICSEDAYPYLARDEECRA-QSCEKVVKILGFKDVPRRSEAAMKAA 330

Query: 261 --------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK--YWLVKNSWG 304
                           FQ Y  GVFD  CG  L+HGV +VGYG D   K  +W++KNSWG
Sbjct: 331 LAKSPVSIAIEADQMPFQFYHEGVFDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWG 390

Query: 305 TSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           T WG  GY+ MA +      G CG+L+ AS+PV
Sbjct: 391 TGWGRDGYMYMAMHKGEE--GQCGLLLDASFPV 421


>gi|400180403|gb|AFP73340.1| cysteine protease [Solanum peruvianum]
 gi|400180413|gb|AFP73345.1| cysteine protease [Solanum peruvianum]
 gi|400180415|gb|AFP73346.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 205/349 (58%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNP-AGLCDIAKMSSYP 341


>gi|400180451|gb|AFP73362.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 207/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PELSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG+++E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIKENGGISSESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|20334373|gb|AAM19207.1|AF493232_1 cysteine protease [Solanum pimpinellifolium]
 gi|400180424|gb|AFP73350.1| cysteine protease [Solanum pimpinellifolium]
 gi|400180433|gb|AFP73354.1| cysteine protease [Solanum lycopersicum]
          Length = 344

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 205/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYLG--------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDYMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGLMTNAFDFIIENGGISRESDYEYLGEQYTCRS-REKTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  Q+NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGNCADQINHAVTAIGY 293

Query: 289 GED-HGEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEEGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/299 (43%), Positives = 179/299 (59%), Gaps = 40/299 (13%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYL- 123
           YS+ Y SE    +R   + +N+++I+  N+++     S+ +  N+FADL+ +EF++ Y+ 
Sbjct: 5   YSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEFMALYVP 64

Query: 124 -GYNK--PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
             +N+  PYN    P+        SVDWR +GAVTP+K+QGQCGSCW+FS   + EG + 
Sbjct: 65  SKFNRTMPYNTVYLPATS----EDSVDWRTKGAVTPIKNQGQCGSCWSFSTTGSTEGAHA 120

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 240
           + TG LVSLSEQ+LVDC  +  NQGCNGG M+ AF++I    G+ TE+DYPY  ++  C 
Sbjct: 121 IATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNKGLDTEEDYPYTAQDGTCN 180

Query: 241 TDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGVFDEYCGHQ 278
            +K   HA TI+ Y  +P                       +  FQLY  GVFD  CG  
Sbjct: 181 KEKEAKHAATISSYSDVPKNNEDQLAAAVAKGPVSVAIEADQSGFQLYKSGVFDGNCGTN 240

Query: 279 LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           L+HGV VVGY +D    YW+VKNSWGT+WG  GYI M R   +S  GICGI MQ SYP+
Sbjct: 241 LDHGVLVVGYTDD----YWIVKNSWGTTWGVEGYINMKRGVSAS--GICGIAMQPSYPI 293


>gi|400180445|gb|AFP73359.1| cysteine protease, partial [Solanum chilense]
          Length = 345

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 207/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PELSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG+++E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIKENGGISSESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGDPS---GLCDIAKMSSYP 341


>gi|400180379|gb|AFP73328.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVITM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|162459488|ref|NP_001105571.1| maize insect resistance1 precursor [Zea mays]
 gi|5731354|gb|AAB70820.2| cysteine protease Mir1 [Zea mays]
          Length = 398

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/295 (46%), Positives = 176/295 (59%), Gaps = 35/295 (11%)

Query: 76  EDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYNKPYNE 131
           E++ + R  ++  N++YID  N++      +F+L    FADL+ EE+    LG+      
Sbjct: 82  EEDRRLRLEVFRDNLRYIDAHNAEADAGLHTFRLGLTPFADLTLEEYRGRVLGFRARGRR 141

Query: 132 PRWP-----SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
                    SV+   LP ++DWR+ GAVT VKDQ QCG CWAFSAVAA+EG+N + TG L
Sbjct: 142 SGARYGSGYSVRGGDLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNL 201

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
           VSLSEQE++DCD  +++ GC+GG ME AF F+   GG+ TE DYP+ G +  C   K K+
Sbjct: 202 VSLSEQEIIDCD--AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKN 259

Query: 247 HAV-TITGY------------EAIPAR----------YAFQLYSHGVFDEYCGHQLNHGV 283
             V TI G             EA+  +           AFQ YS G+F+  CG  L+HGV
Sbjct: 260 EKVATIDGLVEVASNNETALQEAVAIQPVSVAIDASGRAFQHYSSGIFNGPCGTSLDHGV 319

Query: 284 TVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           T VGYG + G+ YW+VKNSW  SWGEAGYIRM RN P    G CGI M ASYPVK
Sbjct: 320 TAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPT-GKCGIAMDASYPVK 373


>gi|413953050|gb|AFW85699.1| hypothetical protein ZEAMMB73_033873 [Zea mays]
          Length = 361

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/360 (40%), Positives = 198/360 (55%), Gaps = 47/360 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M M   +A L+L +L+   +        +        + ERF+ W  +Y+R Y + +E+Q
Sbjct: 1   MTMATASASLALVMLFACSLLLAG--TAFSDDTIAIPLLERFKAWQAEYNRTYATPEEFQ 58

Query: 81  RRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYL---GYNKPYNEPRWP 135
           +RF +YS N+++I  +N  S   S++L +N+F DL+ EEF  TYL       P  E   P
Sbjct: 59  QRFMVYSENLRFIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMPP 118

Query: 136 SVQYLGL------------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
            V  +              P SVDWR +GAVTPVK+Q QCGSCWAF+ VA++EG++++KT
Sbjct: 119 IVGTMSTAGMSNGDNTGEAPNSVDWRTKGAVTPVKNQQQCGSCWAFATVASIEGVHQIKT 178

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G+LVSLSEQE+VDCD    + GC GGY   A E++T+ GG+TTE DYPY G   +C + K
Sbjct: 179 GRLVSLSEQEIVDCDRGGNDHGCRGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGK 238

Query: 244 TKHHAVTITGYEA---------------------IPARYAFQLYSHGVFDEYCG-HQLNH 281
             HHA  I GY+A                     I A  AFQ Y  GVF   C    +NH
Sbjct: 239 LGHHAARIRGYQAVQRKNEAELERAVAGRPVAVVIDASRAFQFYKRGVFSGPCNTTTVNH 298

Query: 282 GVTVV-----GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            VTVV     G     G KYW+VKNSWG  WGE GY+RMAR   +   G+C I ++   P
Sbjct: 299 AVTVVGYGSAGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRARE-GMCAIAIEPLLP 357


>gi|400180349|gb|AFP73313.1| cysteine protease [Solanum peruvianum]
 gi|400180469|gb|AFP73371.1| cysteine protease [Solanum peruvianum]
 gi|400180471|gb|AFP73372.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 207/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  VERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
              L         +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STELKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|125525812|gb|EAY73926.1| hypothetical protein OsI_01810 [Oryza sativa Indica Group]
          Length = 319

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/304 (42%), Positives = 176/304 (57%), Gaps = 29/304 (9%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEF 118
           + FE W+ ++ + Y    E + RFGI+  NV +I  Y         +  N+FADL+N+EF
Sbjct: 18  QMFEEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEF 77

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
           ++TY G   P+ +     V  +  P  +DWR  GAVT VKDQG CGSCWAF+AVAA+EG+
Sbjct: 78  VATYTGAKPPHPKEAPRPVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGL 137

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
            K++TG+L  LSEQELVDCD NS   GC GG+ ++AFE +   GG+T E DY Y G   +
Sbjct: 138 TKIRTGQLTPLSEQELVDCDTNS--NGCGGGHTDRAFELVASKGGITAESDYRYEGFQGK 195

Query: 239 CQTDKTK-HHAVTITGYEAIP-----------ARY-----------AFQLYSHGVFDEYC 275
           C+ D    +HA +I GY A+P           AR            AFQ Y  GVF   C
Sbjct: 196 CRVDDMLFNHAASIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPC 255

Query: 276 GHQLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           G   NH VT+VGY +D   G+KYW+ KNSWG +WG+ GYI + ++    + G CG+ +  
Sbjct: 256 GASSNHAVTLVGYCQDGASGKKYWVAKNSWGKTWGQQGYILLEKDVLQPH-GTCGLAVSP 314

Query: 334 SYPV 337
            YP 
Sbjct: 315 FYPT 318


>gi|164472556|gb|ABY58967.1| cathepsin L [Toxoplasma gondii]
          Length = 421

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 181/333 (54%), Gaps = 49/333 (14%)

Query: 41  PAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN 100
           PA  W      ++     ++ F ++   Y++ Y +E+E QRR+ I+ +N+ YI   N Q 
Sbjct: 101 PANIW------EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG 154

Query: 101 LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG------------LPASVDW 148
            S+ L  N F DLS +EF   YLG+ K  N        +LG            LPA VDW
Sbjct: 155 YSYSLKMNHFGDLSRDEFRRKYLGFKKSRN----LKSHHLGVATELLNVLPSELPAGVDW 210

Query: 149 RKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG 208
           R  G VTPVKDQ  CGSCWAFS   A+EG +  KTGKLVSLSEQEL+DC     NQ C+G
Sbjct: 211 RSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSG 270

Query: 209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------- 260
           G M  AF+++   GG+ +ED YPY  +++ C+  ++    V I G++ +P R        
Sbjct: 271 GEMNDAFQYVLDSGGICSEDAYPYLARDEECRA-QSCEKVVKILGFKDVPRRSEAAMKAA 329

Query: 261 --------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK--YWLVKNSWG 304
                           FQ Y  GVFD  CG  L+HGV +VGYG D   K  +W++KNSWG
Sbjct: 330 LAKSPVSIAIEADQMPFQFYHEGVFDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWG 389

Query: 305 TSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           T WG  GY+ MA +      G CG+L+ AS+PV
Sbjct: 390 TGWGRDGYMYMAMHKGEE--GQCGLLLDASFPV 420


>gi|400180417|gb|AFP73347.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N ++++F +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITVFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP---------- 128
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P          
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPLS 116

Query: 129 YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
             E +   +    +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180363|gb|AFP73320.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 207/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
              L         +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STELKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|400180461|gb|AFP73367.1| cysteine protease [Solanum peruvianum]
 gi|400180473|gb|AFP73373.1| cysteine protease [Solanum peruvianum]
 gi|400180475|gb|AFP73374.1| cysteine protease [Solanum peruvianum]
 gi|400180479|gb|AFP73376.1| cysteine protease [Solanum peruvianum]
 gi|400180481|gb|AFP73377.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 209/351 (59%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPR-WP 135
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P    
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 136 SVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
           S +++        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFIINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|400180347|gb|AFP73312.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|297819568|ref|XP_002877667.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323505|gb|EFH53926.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/313 (42%), Positives = 188/313 (60%), Gaps = 40/313 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEF 118
           E+ E W+ ++ R Y  + E   RF I+  N+++++  N + N ++ L  N+F+DL++EEF
Sbjct: 33  EKHEQWMSRFHRVYSDDSEKTSRFEIFKKNLKFVESFNMNTNKTYTLDVNEFSDLTDEEF 92

Query: 119 ISTYLGYNKPYNEPRWP--------SVQYLGLPA---SVDWRKEGAVTPVKDQGQCGSCW 167
            + Y G   P    R          S +Y  +     S+DWR+EGAVT VK Q QCG CW
Sbjct: 93  KARYTGLVVPEGMTRMSTTDSHETVSFRYENVGETGESMDWREEGAVTSVKHQQQCGCCW 152

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAVAAVEG+ K+  G+LVSLSEQ+L+DC  ++EN GC+GG M KAF++I +  G+T E
Sbjct: 153 AFSAVAAVEGMTKIAKGELVSLSEQQLLDC--STENDGCDGGIMWKAFDYIVENQGITAE 210

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQL 265
           D+YPY+G    C+++     A TI+GYE +P                      + Y F  
Sbjct: 211 DNYPYQGAQQTCESNHVA--AATISGYETVPQNDEEALLKAVSQQPVSVAIEGSGYEFIH 268

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS G+F+  CG  LNH VT+VGYG  + G KYWL+KNSWG SWGE GY+R+ R+  +   
Sbjct: 269 YSGGIFNGECGTHLNHAVTIVGYGVSEEGIKYWLLKNSWGESWGEDGYMRIMRDVDAPQ- 327

Query: 325 GICGILMQASYPV 337
           G+CG+   A YPV
Sbjct: 328 GMCGLASLAYYPV 340


>gi|146215992|gb|ABQ10198.1| actinidin Act4b [Actinidia eriantha]
          Length = 379

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 189/324 (58%), Gaps = 41/324 (12%)

Query: 49  YPQKYDPQSMEE---RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFK 104
           Y +K++ ++ +E    FE+WL +Y + Y +  E +RRF I+  N++++D  N+  N S+K
Sbjct: 32  YAKKWEQRTNDEVMAMFESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYK 91

Query: 105 LTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYLGLPASVDWRKEGAVTP 156
           +  N+F+DL+ EE+ S YLG              EPR        LP S+DWRK+GAV  
Sbjct: 92  VGLNQFSDLTLEEYSSIYLGTKFDMRMTNVSDRYEPRVGDQ----LPNSIDWRKKGAVLG 147

Query: 157 VKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFE 216
           VK+QG CGSCW F+ +AAVE IN++ TG L+SLSEQ++VDC   S N GC GG    A++
Sbjct: 148 VKNQGNCGSCWTFAPIAAVEAINQIVTGNLISLSEQQIVDCQRKSPNNGCKGGSRAGAYQ 207

Query: 217 FITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR---------------- 260
           FI   GG+ TE +YPY+ ++  C   K + + VTI  YE +P +                
Sbjct: 208 FIIDNGGINTEANYPYKAQDGECDEQKNQKY-VTIDRYENVPRKNEKALQKAVSNQLVSV 266

Query: 261 ------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIR 314
                   F+ Y  G+F   CG +++H VT+VGYG + G  YW+V+NSWG++WGE GY+R
Sbjct: 267 GIASNSSEFKAYKSGIFTGPCGAKIDHAVTIVGYGTEGGMDYWIVRNSWGSNWGENGYVR 326

Query: 315 MARNSPSSNIGICGILMQASYPVK 338
           M RN    N G C I    +YPVK
Sbjct: 327 MQRN--VGNAGTCFIATSPNYPVK 348


>gi|400180375|gb|AFP73326.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/349 (38%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENIKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG+++E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIKENGGISSESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S  +  G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDS-GNPAGLCDIAKMSSYP 341


>gi|400180355|gb|AFP73316.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 206/349 (59%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S + + G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNPS-GLCDIAKMSSYP 341


>gi|400180373|gb|AFP73325.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 205/349 (58%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++   Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGHVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QGQCG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GC+GG+M  AF+FI + GG+++E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCDGGFMTNAFDFIKENGGISSESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNP-AGLCDIAKMSSYP 341


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/324 (41%), Positives = 191/324 (58%), Gaps = 38/324 (11%)

Query: 49  YPQK---YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKL 105
           YP+K   +     + +F  + + +++ Y +E+E  +R+ I+ +N+ YI   N Q  S+ L
Sbjct: 73  YPEKIWEWKDHHFQSQFYQFQRDHNKFYATEEERLKRYAIFKNNLTYIHNHNMQGYSYVL 132

Query: 106 TDNKFADLSNEEFISTYLGYNKP--YNEPR-----WPSVQYLGLPASVDWRKEGAVTPVK 158
             NKF DL+ EEF   YLGY KP     PR       SV+   +P  VDWR+ G VT VK
Sbjct: 133 KMNKFGDLTLEEFRQRYLGYKKPDLRTPPREVDTTLESVEDNDIPTHVDWRQRGCVTSVK 192

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           DQG CGSCWAFSA  A+EG+   KTGKLV+LS+Q+LVDC     NQGC+GG ME+AFE++
Sbjct: 193 DQGDCGSCWAFSATGAMEGVYCAKTGKLVNLSQQQLVDCSRFLGNQGCDGGRMEEAFEYV 252

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------ 260
            + GG+ + ++YPY  K+  C++ +    A TITGY ++P R                  
Sbjct: 253 VENGGICSGENYPYMRKDGVCKSSQCTSVA-TITGYRSVPRRSEKSMKTALALRSPVSVA 311

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGY-GEDHGE-KYWLVKNSWGTSWGEAGYI 313
                 AFQ Y  G+FD  CG  L+HGV +VGY  E  G+  YW++KNSWG +WG+ GY+
Sbjct: 312 IQANQAAFQFYYDGIFDAPCGTNLDHGVLLVGYSAETAGQGDYWIMKNSWGAAWGKGGYM 371

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
            MA +   +  G CG+L+  S+PV
Sbjct: 372 LMAMHKGPA--GQCGVLLDGSFPV 393


>gi|302845628|ref|XP_002954352.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
 gi|300260282|gb|EFJ44502.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
          Length = 489

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 184/311 (59%), Gaps = 37/311 (11%)

Query: 62  FENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           F+ W+ QY++ Y ++  E + RF ++  N+ YI   N++  S  L  N FADL+ +EF  
Sbjct: 45  FQQWMMQYTKAYANDIKELETRFSVWLENLNYILAYNARTTSHWLHLNAFADLTTDEF-R 103

Query: 121 TYLGY--------NKPYNEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
             LGY        N+  + P  + +V    LP  +DWRK+GAVT VK+QGQCGSCWAF+ 
Sbjct: 104 NRLGYDFKARQASNRLQSSPFIYDNVDANQLPTEIDWRKKGAVTEVKNQGQCGSCWAFAT 163

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
             +VEGIN + TG+L SLSEQELVDCD + E++GC+GG M+ A+++I K GG+ TEDDYP
Sbjct: 164 TGSVEGINAIVTGELASLSEQELVDCDTD-EDRGCSGGLMDYAYQWIIKNGGLDTEDDYP 222

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHG 269
           Y  ++  C   K     VTI GY  IP                         +FQLY  G
Sbjct: 223 YTAEDGVCVAAKKNRRVVTIDGYVDIPENDEVALKKAAAHQPIAVAIEADAKSFQLYGGG 282

Query: 270 VFDE-YCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V+D+  CG  LNHGV VVGYG+D H   YW+VKNSWG  WG+ GYIR+ R       G+C
Sbjct: 283 VYDDPTCGTSLNHGVLVVGYGKDPHFGNYWIVKNSWGPEWGDNGYIRL-RMGAEDVQGMC 341

Query: 328 GILMQASYPVK 338
           GI M  S+P K
Sbjct: 342 GIAMAPSFPTK 352


>gi|350535639|ref|NP_001233949.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
 gi|108937128|gb|ABG23376.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
          Length = 345

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/353 (39%), Positives = 198/353 (56%), Gaps = 51/353 (14%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYP-----QKYDPQSMEERFENWLKQYSREYGSED 77
             L+N  + L L  +L +        YP     +     SM ER ENW+  + R Y  + 
Sbjct: 5   FFLKNITVVLLLFSILSL--------YPFIVTSRNLKELSMLERHENWMVHHGRVYKDDI 56

Query: 78  EWQRRFGIYSSNVQYIDYINSQNLS-FKLTDNKFADLSNEEFISTYLGYNKPY-----NE 131
           E + RF  +  NV++I+  N      +KL  NK+ADL+ EEF ++++G +        + 
Sbjct: 57  EKEHRFKTFKENVEFIESFNKNGTQRYKLAVNKYADLTTEEFTTSFMGLDTSLLSQQEST 116

Query: 132 PRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
               S +Y     +P S+DWRK G+VT VKDQG CG CWAFSA AA+EG  ++   +L+S
Sbjct: 117 ATTTSFKYDSVTEVPNSMDWRKRGSVTGVKDQGVCGCCWAFSAAAAIEGAYQIANNELIS 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKI--GGVTTEDDYPYRGKNDRCQTDKTKH 246
           LSEQ+L+DC  +++N+GC GG M  A++F+ +   GG+TTE +YPY    + C+T++   
Sbjct: 177 LSEQQLLDC--STQNKGCEGGLMTVAYDFLLQNNGGGITTETNYPYEEAQNVCKTEQPA- 233

Query: 247 HAVTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVV 286
            AVTI GYE +P                    A   F +Y  G++D  C  +LNH VTV+
Sbjct: 234 -AVTINGYEVVPSDESSLLKAVVNQPISVGIAANDEFHMYGSGIYDGSCNSRLNHAVTVI 292

Query: 287 GYG--EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GYG  E+ G KYW+VKNSWG+ WGE GY+R+AR+      G CGI   AS+P 
Sbjct: 293 GYGTSEEDGTKYWIVKNSWGSDWGEEGYMRIARDVGVDG-GHCGIAKVASFPT 344


>gi|226504984|ref|NP_001151293.1| cysteine protease 1 precursor [Zea mays]
 gi|195645596|gb|ACG42266.1| cysteine protease 1 precursor [Zea mays]
          Length = 340

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/308 (42%), Positives = 176/308 (57%), Gaps = 35/308 (11%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFI 119
           R E W+ ++ R Y  E E  RR  ++ +N + ID  N+    S +L  N+FADL+ +EF 
Sbjct: 37  RHEKWMAEHGRAYKDEAEKARRLEVFRANAELIDSFNAAGTHSHRLATNRFADLTVQEFR 96

Query: 120 STYLGYNKPYNEP-------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +   G  +P   P       R+ +        SVDWR  GAVT VKDQG  G CWAFSAV
Sbjct: 97  AARTGL-RPRPAPSAGAGRFRYENFSLADAAQSVDWRAMGAVTGVKDQGASGCCWAFSAV 155

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           AAVEG+NK++TG+LVSLSEQELVDCDV+  +QGC+GG M+ AF+F+ + GG+ +E  YPY
Sbjct: 156 AAVEGLNKIRTGRLVSLSEQELVDCDVSGVDQGCDGGLMDNAFQFVARRGGLASESGYPY 215

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           + ++  C++      A +I G+E +P                         AF+ Y  GV
Sbjct: 216 QCRDGPCRS-SAAAAAASIRGHEDVPRNNEAALAAAVAHQPVSVAINGEDMAFRFYDSGV 274

Query: 271 FDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
               CG  LNH +T VGYG    G +YWL+KNSWG SWGE GY+R+ R       G+CG+
Sbjct: 275 LGGACGTDLNHAITAVGYGTAADGTRYWLMKNSWGASWGEGGYVRIRRGVRGE--GVCGL 332

Query: 330 LMQASYPV 337
               SYPV
Sbjct: 333 AKLPSYPV 340


>gi|302812789|ref|XP_002988081.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
 gi|300144187|gb|EFJ10873.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
          Length = 425

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 179/315 (56%), Gaps = 36/315 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEW-QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSN 115
           +   + +W  ++ +E  S +     RF  +  N +YI+  N +   S++L  N+F+DL++
Sbjct: 9   LSGEYASWCAKFGKECASSNSLGDHRFETFKENFRYIEEHNRAGKHSYRLGLNQFSDLTS 68

Query: 116 EEFISTYLGYNK----------PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EEF   +LG             P +       Q + LPASVDWR+ GAVT  KDQG CG 
Sbjct: 69  EEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRQHGAVTAPKDQGSCGG 128

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAF+   A+EGIN++ TG+LVSLSEQEL+DCD  ++ +GC+GG ME A++FI + GG+ 
Sbjct: 129 CWAFATTGAIEGINQIVTGQLVSLSEQELIDCDKKAD-KGCDGGLMENAYQFIVENGGLD 187

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAF 263
           TE DYPY      C   K     V I GY+AIP                      A   F
Sbjct: 188 TETDYPYHASESHCNMKKLNSRVVAIDGYKAIPEGDEQALLLAVAKQPVSVAIEGASKDF 247

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Q Y+ GVF  +CG ++NHGV +VGYG + G  YW+VKNSW  +WG+ G+++M RN+    
Sbjct: 248 QHYASGVFTGHCGEEINHGVLIVGYGTEDGLDYWIVKNSWAATWGDGGFVKMQRNTGKRG 307

Query: 324 IGICGILMQASYPVK 338
            G+C I   ASYPVK
Sbjct: 308 -GLCSINTLASYPVK 321


>gi|400180467|gb|AFP73370.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/351 (38%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM------FNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|400180367|gb|AFP73322.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  VERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|400180351|gb|AFP73314.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 180/322 (55%), Gaps = 41/322 (12%)

Query: 45  WSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSF 103
           +SE  P +   Q M   F  ++KQYS+ Y S  E+  RF  + +NV+ I   N+  N S+
Sbjct: 28  FSEEVPSEVMLQDM---FTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASY 83

Query: 104 KLTDNKFADLSNEEFISTYLGYN---KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            +  N+FADLS EEF   Y GY    + +        +    P S+DWR   AVTP+KDQ
Sbjct: 84  TMGLNEFADLSFEEFKGKYFGYKHVEREFARSNNLHQEVEAAPTSIDWRTSNAVTPIKDQ 143

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGK--LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           GQCGSCWAFSA  ++EG   L+ GK  L SLSEQ+LVDC  +  N GCNGG M+ AFE+I
Sbjct: 144 GQCGSCWAFSATGSIEGAWVLQ-GKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYI 202

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE----------------------A 256
               G+  E  YPY+G    CQ   TK   VTI+GY+                      A
Sbjct: 203 IANKGICAESAYPYKGVGGLCQKSCTK--VVTISGYKDVASGDEASLLNAVGTVGPVSVA 260

Query: 257 IPARYA-FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
           I A  A FQ YS GVF   CGH L+HGV  VGYG    + YW+VKNSWGTSWGE+GYIRM
Sbjct: 261 IEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIRM 320

Query: 316 ARNSPSSNIGICGILMQASYPV 337
            RN        CGI +Q SYP 
Sbjct: 321 IRNKNQ-----CGIAIQPSYPT 337


>gi|226531284|ref|NP_001147086.1| thiol protease SEN102 precursor [Zea mays]
 gi|195607128|gb|ACG25394.1| thiol protease SEN102 precursor [Zea mays]
          Length = 356

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/360 (42%), Positives = 203/360 (56%), Gaps = 48/360 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M M   +A L+L     L +   A+S+          + ERF+ W  +Y+R Y + +E+Q
Sbjct: 1   MTMATASASLALMFACSLLLAGTAFSD----DTIAIPLLERFKAWQAEYNRTYATPEEFQ 56

Query: 81  RRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYL---GYNKPYNEPRWP 135
           +RF IYS NV++I  +N  S   S++L +N+F DL+ EEF  TYL       P  E   P
Sbjct: 57  QRFMIYSENVRFIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMGP 116

Query: 136 SVQYLGL------------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
           +V  +              P SVDWR +GAVT VKDQ QCGSCWAF+ VA++EG++++KT
Sbjct: 117 TVGTMSTAGMSNGNNTGEAPNSVDWRTKGAVTRVKDQQQCGSCWAFATVASIEGVHQIKT 176

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G+LVSLSEQE+VDCD    + GC GG    A E++T+ GG+TTE DYPY G   +C + K
Sbjct: 177 GRLVSLSEQEIVDCDRGGNDNGCRGGSPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGK 236

Query: 244 TKHHAVTITGYEA---------------------IPARYAFQLYSHGVFDEYC-GHQLNH 281
             HHA  I GY+A                     I A  AFQ Y  GVF   C    +NH
Sbjct: 237 LGHHAARIRGYQAVQRNNEAELERAVAERPVAVFIDASRAFQFYKSGVFSGPCDTTTVNH 296

Query: 282 GVTVVGYG----EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            VTVVGYG    +  G KYW+VKNSWG  WGE GY+RMAR   +   G+C I ++  YPV
Sbjct: 297 VVTVVGYGSTGSDSGGRKYWIVKNSWGQGWGENGYVRMARRVRARE-GMCAIAIEPYYPV 355


>gi|2507252|sp|P14080.2|PAPA2_CARPA RecName: Full=Chymopapain; AltName: Full=Papaya proteinase II;
           Short=PPII; Flags: Precursor
 gi|1332461|emb|CAA66378.1| chymopapain [Carica papaya]
          Length = 352

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 197/351 (56%), Gaps = 38/351 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIP-AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSE 76
           M  + +   L+  L+  +G+  A  ++ GY Q  D  S+E   + F++W+ ++++ Y S 
Sbjct: 4   MSSISKIIFLATCLIIHMGLSSADFYTVGYSQD-DLTSIERLIQLFDSWMLKHNKIYESI 62

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-------KPY 129
           DE   RF I+  N+ YID  N +N S+ L  N FADLSN+EF   Y+G+        + +
Sbjct: 63  DEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHF 122

Query: 130 NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
           +   +        P S+DWR +GAVTPVK+QG CGSCWAFS +A VEGINK+ TG L+ L
Sbjct: 123 DNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLEL 182

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELVDCD +S   GC GGY   + +++    GV T   YPY+ K  +C+        V
Sbjct: 183 SEQELVDCDKHS--YGCKGGYQTTSLQYVAN-NGVHTSKVYPYQAKQYKCRATDKPGPKV 239

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
            ITGY+ +P+                         FQLY  GVFD  CG +L+H VT VG
Sbjct: 240 KITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVG 299

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG   G+ Y ++KNSWG +WGE GY+R+ R S +S  G CG+   + YP K
Sbjct: 300 YGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQ-GTCGVYKSSYYPFK 349


>gi|400180357|gb|AFP73317.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 136/351 (38%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +PS   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPS---GLCDIAKMSSYP 341


>gi|4469153|emb|CAB38314.1| chymopapain isoform II [Carica papaya]
          Length = 352

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 197/351 (56%), Gaps = 38/351 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIP-AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSE 76
           M  + +   L+  L+  +G+  A  ++ GY Q  D  S+E   + F++W+ ++++ Y S 
Sbjct: 4   MSSISKIIFLATCLIIHMGLSSADFYTVGYSQD-DLTSIERLIQLFDSWMLKHNKIYESI 62

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-------KPY 129
           DE   RF I+  N+ YID  N +N S+ L  N FADLSN+EF   Y+G+        + +
Sbjct: 63  DEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHF 122

Query: 130 NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
           +   +        P S+DWR +GAVTPVK+QG CGSCWAFS +A VEGINK+ TG L+ L
Sbjct: 123 DNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLEL 182

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELVDCD +S   GC GGY   + +++    GV T   YPY+ K  +C+        V
Sbjct: 183 SEQELVDCDKHS--YGCKGGYQTTSLQYVAN-NGVHTSKVYPYQAKQYKCRATDKPGPKV 239

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
            ITGY+ +P+                         FQLY  GVFD  CG +L+H VT VG
Sbjct: 240 KITGYKRVPSNCETSFLGALANQPLSFLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVG 299

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG   G+ Y ++KNSWG +WGE GY+R+ R S +S  G CG+   + YP K
Sbjct: 300 YGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQ-GTCGVYKSSYYPFK 349


>gi|413953046|gb|AFW85695.1| thiol protease SEN102 [Zea mays]
          Length = 382

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 153/361 (42%), Positives = 204/361 (56%), Gaps = 48/361 (13%)

Query: 20  DMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           +M M   +A L+L     L +   A+S+          + ERF+ W  +Y+R Y + +E+
Sbjct: 26  NMTMATASASLALMFACSLLLAGTAFSD----DTIAIPLLERFKAWQAEYNRTYATPEEF 81

Query: 80  QRRFGIYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYL---GYNKPYNEPRW 134
           Q+RF IYS NV++I  +N  S   S++L +N+F DL+ EEF  TYL       P  E   
Sbjct: 82  QQRFMIYSENVRFIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMP 141

Query: 135 PSVQYLGL------------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
           P+V  +              P SVDWR +GAVT VKDQ QCGSCWAF+ VA++EG++++K
Sbjct: 142 PTVGTMSTAGMSNGNNTGEAPNSVDWRTKGAVTRVKDQQQCGSCWAFATVASIEGVHQIK 201

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TG+LVSLSEQE+VDCD    + GC GG    A E++T+ GG+TTE DYPY G   +C + 
Sbjct: 202 TGRLVSLSEQEIVDCDRGGNDNGCRGGSPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSG 261

Query: 243 KTKHHAVTITGYEA---------------------IPARYAFQLYSHGVFDEYC-GHQLN 280
           K  HHA  I GY+A                     + A  AFQ Y  GVF   C    +N
Sbjct: 262 KLGHHAARIRGYQAVQRNNEAELERAVAGQPVAVFVDASRAFQFYKSGVFSGPCDTTTVN 321

Query: 281 HGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           H VTVVGYG    +  G KYW+VKNSWG  WGE GY+RMAR   +   G+C I ++  YP
Sbjct: 322 HVVTVVGYGSTGSDSGGRKYWIVKNSWGQGWGENGYVRMARRVRARE-GMCAIAIEPYYP 380

Query: 337 V 337
           V
Sbjct: 381 V 381


>gi|400180465|gb|AFP73369.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 204/349 (58%), Gaps = 43/349 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++E   K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEVAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+S +   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDSGNP-AGLCDIAKMSSYP 341


>gi|400180345|gb|AFP73311.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/350 (38%), Positives = 205/350 (58%), Gaps = 45/350 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           M++ L N +++LF +  +       + G  Q     S+ ER E W+ ++ R Y  E E  
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQP--KLSVSERHELWMSRHGRVYKDEVEKG 57

Query: 81  RRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPSV 137
            RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S 
Sbjct: 58  ERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSS 117

Query: 138 QYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
                       +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+  
Sbjct: 118 TEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEF 177

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQEL+DC  N  N GC+GG+M  AF+FI + GG++ E DY Y G+   C++ + K  AV
Sbjct: 178 SEQELLDCTTN--NYGCDGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAV 234

Query: 250 TITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG 289
            I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GYG
Sbjct: 235 QISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGYG 294

Query: 290 ED-HGEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
            D +G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 295 TDENGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|356521444|ref|XP_003529366.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 340

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/344 (39%), Positives = 198/344 (57%), Gaps = 45/344 (13%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           + +V + F+L++  I   +      +     S+  + E W+  + R Y    E  RR  I
Sbjct: 7   KKSVGTFFMLFLTCICRAS-----SRTLSESSIATQHEEWMAMHDRVYADSAEKDRRQQI 61

Query: 86  YSSNVQYIDYINSQNLS-FKLTDNKFADLSNEEFISTYLG--YNKPYNEPRWPSVQYLG- 141
           +  N+++I+  N++    + L+ N FADL+NEEF++++ G  Y  P     +     LG 
Sbjct: 62  FKENLEFIEKHNNEGKKRYNLSLNSFADLTNEEFVASHTGALYKPPTQLGSFKINHSLGF 121

Query: 142 -------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
                  + AS+DWRK GAV  +K+QG+CGSCWAFSAVAAVEGIN++K G+LVSLSEQ L
Sbjct: 122 HKMSVGDIEASLDWRKRGAVNDIKNQGRCGSCWAFSAVAAVEGINQIKNGQLVSLSEQNL 181

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC   + N GC+G Y+EKAF++I    G+  E++YPY      C  +     A+ I GY
Sbjct: 182 VDC---ASNDGCHGQYVEKAFDYIRDY-GLANEEEYPYVETVGTCSGNSNP--AIQIRGY 235

Query: 255 EAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH 292
           +++  +                        FQ YS GVF   CG +LNH VT+VGYGE+ 
Sbjct: 236 QSVTPQNEEQLLTAVASQPVSVLLEAKGQGFQFYSGGVFSGECGTELNHAVTIVGYGEEA 295

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
             KYWL++NSWG SWGE GY+++ R++ +   G+CGI MQASYP
Sbjct: 296 EGKYWLIRNSWGKSWGEGGYMKLMRDTGNPQ-GLCGINMQASYP 338


>gi|4731372|gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sandersonia aurantiaca]
          Length = 370

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/222 (54%), Positives = 150/222 (67%), Gaps = 28/222 (12%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP SVDWR++GAV P+KDQG CGSCWAFS +A+VEGINK+ TG L+SLSEQELVDCD  +
Sbjct: 41  LPDSVDWREKGAVVPIKDQGGCGSCWAFSTIASVEGINKIVTGDLISLSEQELVDCD-KT 99

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N GCNGG M+ AF+FI   GG+ TE DYPY  ++ RC + +     V+I  YE +P   
Sbjct: 100 YNDGCNGGLMDYAFQFIIDNGGIDTEKDYPYTEQDGRCDSYRKNAKVVSINSYEDVPVND 159

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                 +FQLY+ G+F   CG  L+HGVTVVGYG + G+ YW+V
Sbjct: 160 EQALKKAAASQPIAVAIDGGGRSFQLYNSGIFTGKCGTSLDHGVTVVGYGSESGKDYWIV 219

Query: 300 KNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYPVKR 339
           +NSWG SWGE GYIRMARN  SPS   GICGI M+ASYP+K+
Sbjct: 220 RNSWGESWGEKGYIRMARNIDSPS---GICGIAMEASYPIKK 258


>gi|2351107|dbj|BAA21929.1| bromelain [Ananas comosus]
          Length = 312

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 183/302 (60%), Gaps = 36/302 (11%)

Query: 66  LKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLG 124
           + +Y R Y   DE  RRF I+ +NV +I+  N++N  S+ L  NKF D++N EF++ Y G
Sbjct: 1   MAEYGRVYKDNDEKMRRFQIFKNNVNHIETFNNRNGNSYTLGINKFTDMTNNEFVAQYTG 60

Query: 125 -YNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
             ++P N  + P V +       +  S+DWR  GAVT VKDQ  CGSCWAFSA+A VEGI
Sbjct: 61  GISRPLNIEKEPVVSFDDVNISAVGQSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGI 120

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
            K+ TG LVSLSEQE++DC V++   GC+GG+++ A++FI    GV +E DYPY+     
Sbjct: 121 YKIVTGYLVSLSEQEVLDCAVSN---GCDGGFVDNAYDFIISNNGVASEADYPYQAYQGD 177

Query: 239 CQTDKTKHHAVTITGYEAIPA------RYA----------------FQLYSHGVFDEYCG 276
           C  +   + A  ITGY  + +      +YA                FQ Y+ GVF   CG
Sbjct: 178 CAANSWPNSAY-ITGYSYVRSNDESSMKYAVWNQPIAAAIDASGDNFQYYNGGVFSGPCG 236

Query: 277 HQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
             LNH +T++GYG+D  G +YW+VKNSWG+SWGE GYIRMAR   SS  G+CGI M   Y
Sbjct: 237 TSLNHAITIIGYGQDSSGTQYWIVKNSWGSSWGERGYIRMARGVSSS--GLCGIAMDPLY 294

Query: 336 PV 337
           P 
Sbjct: 295 PT 296


>gi|400180359|gb|AFP73318.1| cysteine protease [Solanum peruvianum]
 gi|400180477|gb|AFP73375.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/351 (38%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|400180387|gb|AFP73332.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 206/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L N +++LF +  +       + G  Q   P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMNILITLFFVISM---FNTQTRGRSQ---PKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  VERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
              L         +P+++DW + GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STELKINDLSDDDMPSNLDWIESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q Y+ G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|333069454|gb|AEF13978.1| chymopapain [Carica papaya]
          Length = 352

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 186/329 (56%), Gaps = 37/329 (11%)

Query: 42  AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS 98
           A  ++ GY Q  D  S+E   + F++W+ ++++ Y S DE   RF I+  N+ YID  N 
Sbjct: 26  ADFYTVGYSQD-DLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNK 84

Query: 99  QNLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKE 151
           +N S+ L  N FADLSN+EF   Y+G         + ++   +        P S+DWR +
Sbjct: 85  KNNSYWLGLNGFADLSNDEFKKKYVGSVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAK 144

Query: 152 GAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           GAVTPVK+QG CGSCWAFS +A VEG+NK+ TG L+ LSEQELVDCD NS   GC GGY 
Sbjct: 145 GAVTPVKNQGSCGSCWAFSTIATVEGVNKIVTGNLLELSEQELVDCDKNS--HGCKGGYQ 202

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------- 260
             + +++    GV T   YPY+ K  +C+        V ITGY+ +P+            
Sbjct: 203 TTSLQYVAD-NGVHTSKVYPYQAKAMQCRATDKPGPKVKITGYKRVPSNCETSFLGALAN 261

Query: 261 -----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGE 309
                        FQLY  GVFD  CG +L+H VT VGYG   G+ Y ++KNSWG +WGE
Sbjct: 262 QPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGE 321

Query: 310 AGYIRMARNSPSSNIGICGILMQASYPVK 338
            GY+R+ R S +S  G CG+   + YP K
Sbjct: 322 KGYMRLKRQSGNSQ-GTCGVYKSSYYPFK 349


>gi|357124027|ref|XP_003563708.1| PREDICTED: germination-specific cysteine protease 1-like
           [Brachypodium distachyon]
          Length = 334

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 183/324 (56%), Gaps = 42/324 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-----LSFKLTDN 108
           D ++M ER+E W+ +  R Y    E  RRF ++ SN  +ID  N+          KLT N
Sbjct: 12  DDKAMRERYEKWMAEQGRTYKDSTEKARRFEVFKSNAHFIDSHNAATGPGGKSRPKLTTN 71

Query: 109 KFADLSNEEFISTYLGYNKPYNEP---------RWPSVQYLGLPASVDWRKEGAVTPVKD 159
           KFADL+ +EF + Y+  ++    P         ++ +V    +P S+DWR  GAVT VKD
Sbjct: 72  KFADLTEDEFRNIYVTGHRVNYRPTSLVTDTVFKFGAVSLSDVPPSIDWRARGAVTSVKD 131

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           Q  C  CWAFS+ AAVEGI+++ TG  VSLS Q+LVDC  N+ N+ C  G ++KA+E+I 
Sbjct: 132 QHLCACCWAFSSAAAVEGIHQITTGNQVSLSVQQLVDCS-NAANEKCKAGEIDKAYEYIA 190

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
           + GG+  + DYPY G +  C+    K     I+G++ +PAR                   
Sbjct: 191 RSGGLVADQDYPYEGHSGTCRV-YGKQAVARISGFQYVPARNETALLLAVAHQPVSVALD 249

Query: 261 ---YAFQLYSHGVF---DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYI 313
               A Q    G+F    E C   LNH +T+VGYG D HG +YWL+KNSWG+ WG+ GY+
Sbjct: 250 GLSRALQHIGTGIFGSAGEPCTTNLNHAMTIVGYGTDEHGTRYWLMKNSWGSDWGDKGYV 309

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
           + AR+  S   G+CG+ ++ASYPV
Sbjct: 310 KFARDVASEINGVCGLALEASYPV 333


>gi|157093563|gb|ABV22436.1| cysteine proteinase [Oxyrrhis marina]
          Length = 329

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 179/311 (57%), Gaps = 37/311 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           ++ ++E +  ++   Y  E+E   R G+++ NVQ I+  NS+  ++ L  N+FADL+ EE
Sbjct: 15  IDAQWEEFKAKFGESYNGEEEEAERKGVFAQNVQLINEENSKGHTYTLGVNQFADLTVEE 74

Query: 118 FISTYLGYNKPYNEPRWPSVQYLG--------LPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           F  TY+G+ KP    ++    YLG        LP SVDW  +GAVTPVK+QGQCGSCW+F
Sbjct: 75  FSKTYMGFKKPAQ--KYGDAAYLGRHVYNGEALPTSVDWSSQGAVTPVKNQGQCGSCWSF 132

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S   ++EG N++ TGKLVSLSEQ+ VDC     NQGCNGG M+ AF++  +   + TE  
Sbjct: 133 STTGSLEGANEISTGKLVSLSEQQFVDCAGTYGNQGCNGGLMDSAFKY-AEANALCTEQS 191

Query: 230 YPYRGKNDRCQTD--KTKHHAVTITGYEAIPA----------------------RYAFQL 265
           YPY+G +  CQ     T     +++GY+ + +                      +  FQL
Sbjct: 192 YPYKGTDGSCQASSCSTGLAKGSVSGYKDVSSDSEQDMMSAVAQQPVSIAIEADKSVFQL 251

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           YS GV    CG  L+HGV  VGYG   G  YW VKNSWG++WG +GY+ + R    S  G
Sbjct: 252 YSGGVLTGACGASLDHGVLAVGYGTLSGTDYWKVKNSWGSTWGMSGYVLLQRGKGGS--G 309

Query: 326 ICGILMQASYP 336
            CG+L + SYP
Sbjct: 310 ECGLLSEPSYP 320


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 180/322 (55%), Gaps = 41/322 (12%)

Query: 45  WSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSF 103
           +SE  P +   Q M   F  ++KQYS+ Y S  E+  RF  + +NV+ I   N+  N S+
Sbjct: 28  FSEEVPSEVMLQDM---FTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASY 83

Query: 104 KLTDNKFADLSNEEFISTYLGYN---KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            +  N+FADLS EEF   Y GY    + +        +    P S+DWR   AVTP+KDQ
Sbjct: 84  TMGLNEFADLSFEEFKGKYFGYKHVEREFARSNNLHQEVEAAPTSIDWRTSNAVTPIKDQ 143

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGK--LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           GQCGSCWAFSA  ++EG   L+ GK  L SLSEQ+LVDC  +  + GCNGG M+ AFE+I
Sbjct: 144 GQCGSCWAFSATGSIEGAWVLQ-GKHTLTSLSEQQLVDCSTSYGDAGCNGGLMDYAFEYI 202

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE----------------------A 256
               G+  E  YPY+G    CQ   TK   VTI+GY+                      A
Sbjct: 203 IANKGICAESAYPYKGVGGLCQKSCTK--VVTISGYKDVASGDEASLLNAVGTVGPVSVA 260

Query: 257 IPARYA-FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
           I A  A FQ YS GVF   CGH L+HGV  VGYG    + YW+VKNSWGTSWGE+GYIRM
Sbjct: 261 IEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIRM 320

Query: 316 ARNSPSSNIGICGILMQASYPV 337
            RN        CGI +Q SYP 
Sbjct: 321 IRNKNQ-----CGIAIQPSYPT 337


>gi|47169030|pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine
           Endopeptidase Functioning In Programmed Cell Death Of
           Ricinus Communis Endosperm
 gi|47169031|pdb|1S4V|B Chain B, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine
           Endopeptidase Functioning In Programmed Cell Death Of
           Ricinus Communis Endosperm
          Length = 229

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 146/221 (66%), Gaps = 25/221 (11%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +PASVDWRK+GAVT VKDQGQCGSCWAFS + AVEGIN++KT KLVSLSEQELVDCD + 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD- 60

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
           +NQGCNGG M+ AFEFI + GG+TTE +YPY   +  C   K    AV+I G+E +P   
Sbjct: 61  QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEND 120

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWL 298
                                  FQ YS GVF   CG +L+HGV +VGYG    G KYW 
Sbjct: 121 ENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWT 180

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VKNSWG  WGE GYIRM R   S   G+CGI M+ASYP+K+
Sbjct: 181 VKNSWGPEWGEKGYIRMER-GISDKEGLCGIAMEASYPIKK 220


>gi|217072410|gb|ACJ84565.1| unknown [Medicago truncatula]
          Length = 328

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/219 (55%), Positives = 144/219 (65%), Gaps = 23/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP SVDWRKEGAV  VKDQ  CGSCWAFSA+AAVEGINK+ TG L+SLSEQELVDCD  S
Sbjct: 24  LPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDT-S 82

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-- 259
            N+GCNGG M+ AFEFI   GG+ +EDDYPY+  + RC  ++     VTI  YE +PA  
Sbjct: 83  YNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNAKVVTIDDYEDVPAYD 142

Query: 260 --------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                  FQLY +GV    CG  L+HGV  VGYG ++G+ YW+V
Sbjct: 143 ELALQKAVANQPIAVAVEGGGREFQLYEYGVLTGRCGTALDHGVAAVGYGTENGKDYWIV 202

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +NSWG SWGE GYIR+ RN  SS  G CGI ++ SYP+K
Sbjct: 203 RNSWGGSWGEQGYIRLERNLASSRAGKCGIAIEPSYPIK 241


>gi|297830594|ref|XP_002883179.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329019|gb|EFH59438.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 308

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/302 (44%), Positives = 172/302 (56%), Gaps = 33/302 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNEEFIS 120
           +E WL +  + Y    E +RR  I+  N+++ID  NS  N +F++   +FADL+N+E   
Sbjct: 2   YERWLVENRKNYNGLGEKERRCKIFKENLKFIDEHNSLPNQTFEVGLTRFADLTNDEPKD 61

Query: 121 TYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
                   Y E          LP  +DWR +GAV PVKDQG CGSCWAFSAV AVEGIN+
Sbjct: 62  FMKADRYLYKEGDI-------LPDEIDWRAKGAVVPVKDQGNCGSCWAFSAVGAVEGINQ 114

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRC 239
           +KTG+L+SLS+QEL+DCD    N GC GG M  AFEFI   GG+ ++ DYPY   +   C
Sbjct: 115 IKTGELISLSDQELIDCDRGFVNAGCEGGVMNYAFEFIINNGGIESDQDYPYTATDLGVC 174

Query: 240 QTDKTKH-HAVTITGYEAI----------------------PARYAFQLYSHGVFDEYCG 276
             DK  +   V I GYE +                       +  AF+LY  GVF   CG
Sbjct: 175 NADKKNNTRVVKIDGYEYVAQNDEKSLKKAVAHQPVGVAIEASSQAFKLYKSGVFTGTCG 234

Query: 277 HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
             L+HGV VVGYG   GE YW+++NSWG +WGE GY+++ RN   S  G CG+ M  SYP
Sbjct: 235 IYLDHGVVVVGYGTSSGEDYWIIRNSWGLNWGENGYVKLQRNIDDS-FGKCGVAMMPSYP 293

Query: 337 VK 338
            K
Sbjct: 294 TK 295


>gi|357160095|ref|XP_003578656.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2-like
           [Brachypodium distachyon]
          Length = 377

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 55/340 (16%)

Query: 51  QKYDP---QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNLSFK 104
           ++ DP   Q+M  RF+ W  ++ R Y + DE  RR  +Y+ NV+YI+  N   +  L+++
Sbjct: 39  EETDPTILQTMAPRFQRWKAEHGRAYATRDEELRRLRVYARNVRYIEAANGDPAAGLTYQ 98

Query: 105 LTDNKFADLSNEEF-----------------------ISTYLGYNKPYNEPRWPSVQYLG 141
           L +  + DL+ +EF                       I+T  G      +  + +V   G
Sbjct: 99  LGETAYTDLTADEFTAMYTSPSPVLSAHDDEAAGAMMITTRAGAVDAGGQQVYFNVSTAG 158

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
            PASVDWR +GAVT VK+QG+CGSCWAFS VA VEGI++++TG L+SLSEQELVDCD  +
Sbjct: 159 APASVDWRAKGAVTEVKNQGRCGSCWAFSTVAVVEGIHQIRTGNLISLSEQELVDCD--T 216

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY 261
            + GC+GG    A E+I   GG+ TE DYPY GK+  C  +K   HA  I+G+  +  R 
Sbjct: 217 LDYGCDGGVSYHALEWIASNGGIATEADYPYTGKDGACVANKLPLHAAAISGFARVATRS 276

Query: 262 A----------------------FQLYSHGVFDEYCGHQLNHGVTVV--GYGEDHGEKYW 297
                                  FQ Y  GV++  CG +LNHGVTVV  G  E  GEKYW
Sbjct: 277 EPSLANAVAAQPVAVSIEAGGANFQHYVKGVYNGPCGTRLNHGVTVVGYGEEEGDGEKYW 336

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +VKNSWG  WG+ GY RM ++      G+CGI ++ S+P+
Sbjct: 337 IVKNSWGKKWGDGGYFRMKKDVAGKPEGLCGIAIRPSFPL 376


>gi|242040563|ref|XP_002467676.1| hypothetical protein SORBIDRAFT_01g032090 [Sorghum bicolor]
 gi|241921530|gb|EER94674.1| hypothetical protein SORBIDRAFT_01g032090 [Sorghum bicolor]
          Length = 358

 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 180/311 (57%), Gaps = 37/311 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNE 116
           M +RF  W   Y+R Y + +E QRRF +Y  N+++I+  N + NL++ L +N+FADL+ E
Sbjct: 53  MMDRFLRWQATYNRSYPTAEERQRRFQVYRRNMEHIEATNRAGNLTYTLGENQFADLTEE 112

Query: 117 EFISTYLGYNKP--------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG-QCGSCW 167
           EF+  Y     P          +  + SV  +  P SVDWR  GAVTP+K+QG  C SCW
Sbjct: 113 EFLDLYTMKGMPPVRRDAGKKQQANFSSV--VDAPTSVDWRSRGAVTPIKNQGPSCSSCW 170

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AF   A +E I +++TGKLVSLSEQEL+DCD    + GCN GY    ++++ + GG+TTE
Sbjct: 171 AFVTAATIESITQIRTGKLVSLSEQELIDCD--PYDGGCNLGYFVNGYKWVIQNGGLTTE 228

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY--------------------AFQLYS 267
            +YPY+ +  +C   K    A  I+ Y  +P                       + Q YS
Sbjct: 229 ANYPYQARRYQCNRSKAGQRAARISNYRQLPQGEAQLQQAVAQQPVAAAIEMGGSLQFYS 288

Query: 268 HGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            GV+   CG ++NH +TVVGYG D  G KYWLVKNSWG +WGE GY+RM ++      G+
Sbjct: 289 GGVWSGQCGTRMNHAITVVGYGADSSGVKYWLVKNSWGQTWGERGYLRMRKDVRQG--GL 346

Query: 327 CGILMQASYPV 337
           CGI +  +YP+
Sbjct: 347 CGIALDLAYPI 357


>gi|242055753|ref|XP_002457022.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
 gi|241928997|gb|EES02142.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
          Length = 378

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/360 (42%), Positives = 196/360 (54%), Gaps = 62/360 (17%)

Query: 38  LGIPAGAWS-EGYPQK--YDPQSMEERFENWLKQYSR-EYGSEDEWQRRFGIYSSNVQYI 93
           LG+  G +S  GY ++     +S+ E FE WL ++ +  Y S +E  RRF ++  N+ +I
Sbjct: 21  LGLARGDFSIVGYSEEDLSSHESLAELFERWLSRHRKGAYASLEEKLRRFEVFKDNLHHI 80

Query: 94  DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEP--------------------- 132
           D  N +  S+ L  N+FADL+++EF +TYLG +                           
Sbjct: 81  DETNRKVSSYWLGLNEFADLTHDEFKATYLGLSPSGGGGDVVHMHHDDDDEEPEEEGSSS 140

Query: 133 ------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKL 186
                 R+  V    LP SVDWR +GAVT VK+QGQCGSCWAFS VAAVEGIN++ TG L
Sbjct: 141 SSSFRFRYEGVDAARLPKSVDWRSKGAVTGVKNQGQCGSCWAFSTVAAVEGINQIVTGNL 200

Query: 187 VSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKH 246
            +LSEQELVDCD +  N GCNGG M+ AF +I   GG+ TE+ YPY  +   C    +  
Sbjct: 201 TALSEQELVDCDTDG-NNGCNGGLMDYAFSYIAHNGGLHTEEAYPYLMEEGTCSRGSSA- 258

Query: 247 HAVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVT 284
             VTI+GYE +P                      +    Q YS GVFD  CG QL+HGV 
Sbjct: 259 AVVTISGYEDVPRNNEQALLKALAHQPVSVAIEASGRNLQFYSGGVFDGPCGTQLDHGVA 318

Query: 285 VVGY---GEDHGE---KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            VGY   G+D+G     Y +VKNSWG SWGE GYIRM R +     G+CGI    SYP K
Sbjct: 319 AVGYGTAGKDNGHVVADYIIVKNSWGPSWGEKGYIRMRRGTGKRQ-GLCGINKMPSYPTK 377


>gi|4469155|emb|CAB38315.1| chymopapain isoform III [Carica papaya]
          Length = 361

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 196/351 (55%), Gaps = 38/351 (10%)

Query: 21  MRMMLRNAVLSLFLLWVLGIP-AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSE 76
           M  + +   L+  L+  +G+  A  ++ GY Q  D  S+E   + F++W+ ++++ Y S 
Sbjct: 4   MSSISKIIFLATCLIIHMGLSSADFYTVGYSQD-DLTSIERLIQLFDSWMLKHNKIYESI 62

Query: 77  DEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN-------KPY 129
           DE   RF I+  N+ YID  N +N S+ L  N FADLSN+EF   Y+G+        + +
Sbjct: 63  DEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHF 122

Query: 130 NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
           +   +        P S+DWR +GAVTPVK+QG CGSCWAFS +A VEGINK+ TG L+ L
Sbjct: 123 DNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLEL 182

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQELVDCD +S   GC GGY   + +++    GV T   YP + K  +C+        V
Sbjct: 183 SEQELVDCDKHS--YGCKGGYQTTSLQYVAN-NGVHTSKVYPCQAKQYKCRATDKPGPKV 239

Query: 250 TITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVG 287
            ITGY+ +P+                         FQLY  GVFD  CG +L+H VT VG
Sbjct: 240 KITGYKRVPSNCETSFLGALANQPLSFLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVG 299

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YG   G+ Y ++KNSWG +WGE GY+R+ R S +S  G CG+   + YP K
Sbjct: 300 YGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQ-GTCGVYKSSYYPFK 349


>gi|325185016|emb|CCA19507.1| cysteine protease family C01A putative [Albugo laibachii Nc14]
          Length = 492

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/290 (45%), Positives = 173/290 (59%), Gaps = 17/290 (5%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           E  F +WLK +   +    E+ +R   Y +N  YI   N Q  SFKL  N F+ L+NEEF
Sbjct: 30  ESDFVSWLKTHHLTFSDAFEYAKRLETYIANDIYILTHNLQESSFKLGHNAFSHLTNEEF 89

Query: 119 ISTYLGYNKP----------YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              + G+              N     + QY+ LP SVDW ++GAVT VK+QG CGSCWA
Sbjct: 90  RQRFNGFKASDDYLTKRLAQSNVASSTNFQYIDLPESVDWVEKGAVTGVKNQGMCGSCWA 149

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   A+EG   + +GKLVSLSEQELVDCD N ++ GCNGG M+ AF +I++  G+ +E+
Sbjct: 150 FSTTGAIEGATFISSGKLVSLSEQELVDCDHNGDH-GCNGGLMDHAFSWISEHDGICSEE 208

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-RYAFQLYSHGVFDEYCGHQLNHGVTVVG 287
           DY Y      C++ K     V +    AI A   +FQ Y  GV+++ CG QL+HGV  VG
Sbjct: 209 DYAYIHSQSLCRSCKPVVSPVAV----AIDAGDRSFQFYQSGVYNKTCGTQLDHGVLTVG 264

Query: 288 YGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YG + G+KYW VKNSWG SWGE GYIR++R+    + G CGI M  SYP 
Sbjct: 265 YGVEDGQKYWKVKNSWGNSWGEKGYIRLSRDQNGRS-GQCGIAMVPSYPT 313


>gi|413943290|gb|AFW75939.1| maize insect resistance1 [Zea mays]
          Length = 435

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/343 (40%), Positives = 186/343 (54%), Gaps = 61/343 (17%)

Query: 50  PQKYDPQSMEERFENWLKQYSREYGS-------------EDEWQRRFGIYSSNVQYIDYI 96
           P +   + +   +E W  ++ R   S             E++ + R  ++  N++YID  
Sbjct: 72  PAERADEEVRRMYEAWKSKHGRGGSSNDDCDMAPGDDEQEEDRRLRLEVFRDNLRYIDKH 131

Query: 97  NSQN----LSFKLTDNKFADLSNEEFISTYLGYNKPYN--------------EPRWPSVQ 138
           N++      +F+L    FADL+ +E+    LG+                    PR   + 
Sbjct: 132 NAEADAGLHTFRLGLTPFADLTLDEYRGRVLGFRARARRSGARYGHGHGYRARPRGGDL- 190

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              LP ++DWR+ GAVT VKDQ QCG CWAFSAVAA+EGIN + TG LVSLSEQE++DCD
Sbjct: 191 ---LPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGINAIATGNLVSLSEQEIIDCD 247

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV-TITGY--- 254
             +++ GC+GG ME AF F+   GG+ TE DYP+ G +  C   K  +  V TI G    
Sbjct: 248 --AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKENNEKVATIDGLVEV 305

Query: 255 ---------EAIPAR----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
                    EA+  +           AFQ YS G+F+  CG  L+HGVT VGYG + G+ 
Sbjct: 306 ASNNETALQEAVAIQPVSVAIDASGRAFQHYSSGIFNGPCGTSLDHGVTAVGYGSESGKD 365

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YW+VKNSW  SWGEAGYIRM RN P    G CGI M ASYPVK
Sbjct: 366 YWIVKNSWSASWGEAGYIRMRRNVPRPT-GKCGIAMDASYPVK 407


>gi|222641485|gb|EEE69617.1| hypothetical protein OsJ_29194 [Oryza sativa Japonica Group]
          Length = 360

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/334 (41%), Positives = 188/334 (56%), Gaps = 47/334 (14%)

Query: 29  VLSLFLLWVLG-------IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           VL+L LL   G       +PA A + G         M +RF  W   ++R Y S +E  +
Sbjct: 12  VLTLALLASCGALLATSMLPARA-TAGSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQ 70

Query: 82  RFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRW--- 134
           RF +Y  N ++ID +N + +L+++L +N+FADL+ EEF++TY GY   + P ++      
Sbjct: 71  RFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYAGDGPVDDSVITTG 130

Query: 135 -----PSVQY-LGLPASVDWRKEGAVTPVKDQ-GQCGSCWAFSAVAAVEGINKLKTGKLV 187
                 S  Y + +PASVDWR +GAV P K Q   C SCWAF   A +E +N +KTGKLV
Sbjct: 131 AGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSSCWAFVTAATIESLNMIKTGKLV 190

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDCD  S + GCN G   +A++++ + GG+TTE DYPY  +   C   K+ HH
Sbjct: 191 SLSEQQLVDCD--SYDGGCNLGSYGRAYKWVVENGGLTTEADYPYTARRGPCNRAKSAHH 248

Query: 248 AVTITGYEAIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVV 286
           A  ITG+  +P R                        Q Y  GV+   CG +L H VTVV
Sbjct: 249 AAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGSGMQFYKGGVYTGPCGTRLAHAVTVV 308

Query: 287 GYGED--HGEKYWLVKNSWGTSWGEAGYIRMARN 318
           GYG D   G KYW +KNSWG SWGE GYIR+ R+
Sbjct: 309 GYGTDASSGAKYWTIKNSWGQSWGERGYIRILRD 342


>gi|255563134|ref|XP_002522571.1| cysteine protease, putative [Ricinus communis]
 gi|223538262|gb|EEF39871.1| cysteine protease, putative [Ricinus communis]
          Length = 343

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/354 (41%), Positives = 199/354 (56%), Gaps = 50/354 (14%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAW-SEGYPQKY-DPQSMEERFENWLKQYSREYGSEDE 78
           M + L+   L + LL +LG     W S+  P+   + +++ E+ E W+ ++ R Y    E
Sbjct: 1   MPLSLQITKLVITLLMILG----TWVSQAMPRPLLNAEAIAEKHEQWMARHGRTYHDNAE 56

Query: 79  WQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV 137
            +RRF I+ +N+ YI+  N   N ++KL  NKF+DLS EEF++TY GY  P   P   + 
Sbjct: 57  KERRFQIFKNNLDYIENFNKAFNKTYKLGLNKFSDLSEEEFVTTYNGYEMPTTLPTANTT 116

Query: 138 -------QYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
                   Y     +P S+DWR+ G VT VK+QG+CG CWAFSAVAAVEGI     G   
Sbjct: 117 VKPTFFSNYYNQDEVPESIDWRENGVVTSVKNQGECGCCWAFSAVAAVEGI----AGNGA 172

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLS Q+L+DC    +N GC GG M KAFE+I +  G+ ++ DYPY    + C++    + 
Sbjct: 173 SLSAQQLLDCV--GDNSGCGGGTMIKAFEYIVQNQGIVSDTDYPYEQTQEMCRSG--SNV 228

Query: 248 AVTITGYEAI--------------PARYA--------FQLYSHGVFD-EYCGHQLNHGVT 284
           A  ITGYE++              P   A        F+ Y  GVF  E CG  L H VT
Sbjct: 229 AARITGYESVIQSEEALKRAVAKQPISVAIDASSGPNFKSYISGVFSAEDCGTHLTHAVT 288

Query: 285 VVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +VGYG  + G KYWLVKNSWG  WGE+GY+R+ R+  +   G CGI MQASYP 
Sbjct: 289 LVGYGTTEDGTKYWLVKNSWGEEWGESGYMRLQRDVGAME-GPCGIAMQASYPT 341


>gi|357114837|ref|XP_003559200.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 371

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 194/363 (53%), Gaps = 50/363 (13%)

Query: 17  IAIDMRMMLRNAVLSLFLLWVLGIPAGAWSE--GYPQKYDPQSMEERFENWLKQYSREYG 74
           +A    +MLR     LF+      PA   +   G+  + D   M +RF  W   ++R YG
Sbjct: 15  LATTAVLMLRGC---LFVFLTALPPAAIMTPAAGHVVELDDMLMLDRFVRWQAAHNRTYG 71

Query: 75  SEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGY----NKPY 129
             +E  RRF +Y +N++YI+  N +  L+++L +N+FADL++EEF+S Y       ++  
Sbjct: 72  DAEERLRRFQVYRANIEYIEATNRRGGLTYELGENQFADLTSEEFLSMYASSYDAGDRAD 131

Query: 130 NEPRWPSVQYLG------------LPASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVE 176
           +E    +    G             P S DWR +GAVTP K+QG  C SCWAF  VA +E
Sbjct: 132 DEAALITTDVAGDGAWSDGDLEALPPPSWDWRAKGAVTPPKNQGPTCSSCWAFVTVATIE 191

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G+  +KTGKL+SLSEQ+LVDCD+   + GCN G   + F ++ + GG+TTE +YPY    
Sbjct: 192 GLTFIKTGKLISLSEQQLVDCDMY--DGGCNTGSYSRGFRWVLENGGLTTEAEYPYTAAR 249

Query: 237 DRCQTDKTKHHAVTITGYEAIPAR---------------------YAFQLYSHGVFDEYC 275
             C   K+ HHA  ITG   IP +                        Q Y  GV+   C
Sbjct: 250 GPCNRAKSAHHAAKITGQGRIPPQNELVMQKAVAGQPVGVAIEVGSGMQFYKTGVYSGPC 309

Query: 276 GHQLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           G  L H VTVVGYG D   G KYW+VKNSWG +WGE G+IRM R+      G+CGI +  
Sbjct: 310 GTNLAHAVTVVGYGVDPASGAKYWIVKNSWGQAWGERGFIRMRRD--VGGPGLCGIALDV 367

Query: 334 SYP 336
           +YP
Sbjct: 368 AYP 370


>gi|302779822|ref|XP_002971686.1| hypothetical protein SELMODRAFT_16221 [Selaginella moellendorffii]
 gi|300160818|gb|EFJ27435.1| hypothetical protein SELMODRAFT_16221 [Selaginella moellendorffii]
          Length = 214

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/217 (53%), Positives = 147/217 (67%), Gaps = 26/217 (11%)

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
           SVDWRK+G VT +KDQG CG+CWAFSA+AAVEG+  L TG LVSLSEQELVDCD  + NQ
Sbjct: 1   SVDWRKKGGVTEIKDQGDCGNCWAFSAIAAVEGLTFLSTGTLVSLSEQELVDCDT-TVNQ 59

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA-- 262
           GC+GG M+ AF+++ + GG+T++ +YPYR +   C  DK K+HA TI G++AIP +    
Sbjct: 60  GCDGGMMDYAFQYMIRNGGITSQSNYPYRAQRGACDKDKVKYHAATINGFQAIPPQSEEL 119

Query: 263 --------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKN 301
                               FQLYS GVF   CG  L+HGV +VGYG D  G +YWLVKN
Sbjct: 120 LLRAVANQPVSVAIEAGGQDFQLYSSGVFTGECGSNLDHGVAIVGYGTDAGGRQYWLVKN 179

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           SWG+ WGE+GY+RM R  P +  G+CGI + ASYP K
Sbjct: 180 SWGSGWGESGYVRMERQGPGA--GVCGINLDASYPTK 214


>gi|400180391|gb|AFP73334.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/351 (38%), Positives = 205/351 (58%), Gaps = 47/351 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEW 79
           M++ L + +++LF +  +      ++     +  P+ S+ ER E W+ ++ R Y  E E 
Sbjct: 3   MKVDLMSILITLFFVISM------FNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEK 56

Query: 80  QRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPS 136
             RF I+  N+++I+ +N + NLS+KL  N+FAD++++EF++ + G N P  Y  P   S
Sbjct: 57  GERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS 116

Query: 137 VQYL--------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVS 188
                        +P+++DWR+ GAVT VK QG+CG CWAFSAV ++EG  K+ TG L+ 
Sbjct: 117 STEFKINDLSDDDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLME 176

Query: 189 LSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA 248
            SEQEL+DC  N  N GCNGG+M  AF+FI + GG++ E DY Y G+   C++ + K  A
Sbjct: 177 FSEQELLDCTTN--NYGCNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAA 233

Query: 249 VTITGYEAIP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           V I+ Y+ +P                    A    Q  + G +D  C  ++NH VT +GY
Sbjct: 234 VQISSYQVVPEGETSLLQAVTKQPVSIGIAASQDLQFCAGGTYDGSCADRINHAVTAIGY 293

Query: 289 GEDH-GEKYWLVKNSWGTSWGEAGYIRMARN--SPSSNIGICGILMQASYP 336
           G D  G+KYWL+KNSWGTSWGE G++++ R+  +P+   G+C I   +SYP
Sbjct: 294 GTDEKGQKYWLLKNSWGTSWGENGFMKIIRDYGNPA---GLCDIAKMSSYP 341


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 174/307 (56%), Gaps = 36/307 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           F++W   +   Y +  E   R GIY +N+ +I+  NS+  S+KL  NKFADL+  EF + 
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGHSYKLAVNKFADLTYPEFAAK 81

Query: 122 YLG--YNKPYNEPRWPSVQYL----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           YLG  ++       + +  YL     LP SVDWR  G VTP+KDQGQCGSCW+FS   +V
Sbjct: 82  YLGLRFDATNATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSV 141

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  KTG+LVSLSEQ LVDC     N GCNGG M++AF++I    G+ TE  YPY  +
Sbjct: 142 EGQHARKTGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQ 201

Query: 236 NDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYSHGVFD 272
           +  CQ +     A T+  Y+ I                        ++ +FQ YS GV++
Sbjct: 202 DGTCQFNSANVGA-TVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYN 260

Query: 273 E--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           E      QL+HGV  VGYG      YWLVKNSWGTSWG++GYI M RNS +     CGI 
Sbjct: 261 EPACSSSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQ----CGIA 316

Query: 331 MQASYPV 337
             ASYP+
Sbjct: 317 TAASYPL 323


>gi|357507617|ref|XP_003624097.1| Cysteine protease [Medicago truncatula]
 gi|355499112|gb|AES80315.1| Cysteine protease [Medicago truncatula]
          Length = 340

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 186/333 (55%), Gaps = 40/333 (12%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQ-SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           L ++WV+      +     Q+ D   ++ ER+++W  +Y   Y  + E ++   I+  NV
Sbjct: 14  LIVIWVM------FPSNQNQENDQSLTLSERYKHWKIKYRVIYKDDAEEEKHIQIFKHNV 67

Query: 91  QYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV----QYLGLPAS 145
            YID  N+  N S+KLT N+FADL  E    +  G+ K   EP   S+        +PA+
Sbjct: 68  AYIDSFNAAGNKSYKLTINRFADLPTE---PSDDGFKKRKLEPTTSSLFKYKNITDIPAA 124

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWRK GAVTPVK+Q +CGSCWAFSAV A+EGI ++ +G LVSLSEQELVD   ++   G
Sbjct: 125 VDWRKRGAVTPVKNQRECGSCWAFSAVGALEGIQQITSGNLVSLSEQELVDRVRSNWTNG 184

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY---- 261
           CNGGY+  AFEF+ + GG+ TE  YPYRG   +    K     V I  YE +P       
Sbjct: 185 CNGGYLIDAFEFVLENGGIATEASYPYRGV--KGNNSKKVSRQVQIKSYEQVPRNSEDSL 242

Query: 262 -----------------AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSW 303
                              + YS G+F   CG + NH V +VGYG  + G KYWLVKNSW
Sbjct: 243 LKVVANQPVSVGIDISGMIRFYSSGIFTGECGTKPNHAVIIVGYGTSNDGTKYWLVKNSW 302

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G  WGE  YIRM R+  +   G+CGI M ASYP
Sbjct: 303 GIRWGEKRYIRMKRDIDAKE-GLCGIPMDASYP 334


>gi|326502440|dbj|BAJ95283.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 183/317 (57%), Gaps = 40/317 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLS 114
            +M  R E W+ ++ R Y +E+E  RR  ++ +N + ID  NS ++ + +L  N+FADL+
Sbjct: 38  SAMVSRHEKWMAEHGRTYANEEEKARRLEVFRANAKLIDSFNSAEDSTHRLATNRFADLT 97

Query: 115 NEEFISTYLGYNKPYNEP----------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +EEF +   G  +P              R+ +        S+DWR  GAVT VKDQG CG
Sbjct: 98  DEEFRAARTGLRRPPAAAAGAGSGAGGFRYENFSLADAAGSMDWRAMGAVTGVKDQGSCG 157

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
            CWAFSAVAAVEG+ K++TG+LVSLSEQ+LVDCDV  +++GC GG M+ AFE++   GG+
Sbjct: 158 CCWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCDVYGDDEGCAGGLMDNAFEYMINRGGL 217

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
           TTE  YPYRG +  C+   +   A +I GYE +PA                         
Sbjct: 218 TTESSYPYRGTDGSCRRSAS---AASIRGYEDVPANNEAALMAAVAHQPVSVAINGGDSV 274

Query: 263 FQLYSHGVF-DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           F+ Y  GV     CG +LNH +T VGYG    G KYW++KNSWG SWGE GY+R+ R   
Sbjct: 275 FRFYDSGVLGGSGCGTELNHAITAVGYGTASDGTKYWIMKNSWGGSWGEGGYVRIRRGVR 334

Query: 321 SSNIGICGILMQASYPV 337
               G+CG+   ASYPV
Sbjct: 335 GE--GVCGLAQLASYPV 349


>gi|413953665|gb|AFW86314.1| hypothetical protein ZEAMMB73_546353 [Zea mays]
          Length = 233

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/229 (51%), Positives = 149/229 (65%), Gaps = 26/229 (11%)

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           R+ +V    LP ++DWR +GAVTP+KDQGQCG CWAFSAVAA EGI K+ TGKLVSL+EQ
Sbjct: 8   RYENVSADALPTTIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQ 67

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCDV+ E+QGC GG M+ AF+FI K GG+TTE  YPY   + +C++    + A TI 
Sbjct: 68  ELVDCDVHDEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTAADGKCKSG--SNSAATIK 125

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +PA                         FQ YS GV    CG  L+HG+  +GYG+
Sbjct: 126 GYEDVPANDEAALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGK 185

Query: 291 -DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYWL+KNSWGT+WGE GY+RM ++  S   G+CG+ M+ SYP K
Sbjct: 186 TSDGTKYWLMKNSWGTTWGENGYLRMEKDI-SDKRGMCGLAMEPSYPTK 233


>gi|242094002|ref|XP_002437491.1| hypothetical protein SORBIDRAFT_10g028010 [Sorghum bicolor]
 gi|241915714|gb|EER88858.1| hypothetical protein SORBIDRAFT_10g028010 [Sorghum bicolor]
          Length = 397

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/343 (40%), Positives = 189/343 (55%), Gaps = 59/343 (17%)

Query: 50  PQKYDPQSMEERFENWLKQYSREYG----SEDEWQRRFGIYSSNVQYIDYINSQN----L 101
           P +   + +   +E W  ++ R  G    + DE + R  ++  N++YID  N++      
Sbjct: 42  PAERADEEVRRMYEAWKSKHGRPRGNCDMAGDEDRLRLEVFRDNLRYIDAHNAEADAGLH 101

Query: 102 SFKLTDNKFADLSNEEFISTYLGYNK-----PYNEPRWPSVQYLG--------------- 141
           +F+L    FADL+ EE+    LG+       P        V   G               
Sbjct: 102 TFRLGLTPFADLTLEEYRGRALGFRARHRGGPSARAAASRVGSGGTRSHHRRPRPRPRCG 161

Query: 142 -LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP ++DWR+ GAVT VK+Q QCG CWAFSAVAA+EGIN + TG LVSLSEQE++DCD  
Sbjct: 162 DLPDAIDWRQLGAVTDVKNQEQCGGCWAFSAVAAIEGINAIVTGNLVSLSEQEIIDCD-- 219

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV-TITGY----- 254
           +++ GCNGG ME AF+F+   GG+ +E DYP+   +  C  +K     V  I G+     
Sbjct: 220 TQDSGCNGGQMENAFQFVIDNGGIDSEADYPFIATDGTCDANKANDEKVAAIDGFVEVAS 279

Query: 255 -------EAIPAR----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYW 297
                  EA+  +           AFQ YS G+F+  CG  L+HGVTVVGYG ++G+ YW
Sbjct: 280 NNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTNLDHGVTVVGYGSENGKAYW 339

Query: 298 LVKNSWGTSWGEAGYIRMARNS--PSSNIGICGILMQASYPVK 338
           +VKNSW  SWGEAGYIR+ RN   P   +G CGI M ASYPVK
Sbjct: 340 IVKNSWSDSWGEAGYIRIRRNVFLP---VGKCGIAMDASYPVK 379


>gi|147769019|emb|CAN62459.1| hypothetical protein VITISV_015168 [Vitis vinifera]
          Length = 246

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/262 (48%), Positives = 154/262 (58%), Gaps = 46/262 (17%)

Query: 102 SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPASVDWRKEGAVTPVK 158
           S+KL+ N+FADL+NEEF ++   +          S +Y     +P++ DWRK+GAVTP+K
Sbjct: 4   SYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYENVTAVPSTXDWRKKGAVTPIK 63

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           DQGQCGSCWAFSAVAA+EGI +L TGKL+SLSEQELVDCD + E+QGC G          
Sbjct: 64  DQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQGCXGA--------- 114

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------ 260
                     +YPY G +  C   K  H A  I GYE +PA                   
Sbjct: 115 ----------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKALQKAVAHQPIAVAI 164

Query: 261 ----YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRM 315
                 FQ YS GVF   CG +L+HGV  VGYG  D G KYWLVKNSWGT WGE GYIRM
Sbjct: 165 DAGGXEFQFYSSGVFTGQCGTELDHGVXAVGYGTSDDGMKYWLVKNSWGTGWGEEGYIRM 224

Query: 316 ARNSPSSNIGICGILMQASYPV 337
            R+  +   G+CGI MQASYP 
Sbjct: 225 QRDVTAKE-GLCGIAMQASYPT 245


>gi|359483514|ref|XP_003632971.1| PREDICTED: LOW QUALITY PROTEIN: oryzain beta chain-like [Vitis
           vinifera]
          Length = 340

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 177/324 (54%), Gaps = 35/324 (10%)

Query: 46  SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFK 104
           SE   +     SM ER E W+ +YSR Y  + E +RRF ++  NV +I   ++  N+  K
Sbjct: 19  SEATSRPLHEASMYERHEQWMARYSRNYKDDAEEERRFXMFKDNVDFIQTFDTAGNMPNK 78

Query: 105 LTDNKFADLSNEEF--------ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTP 156
           L  N  AD+++EEF        I   LG        R  +V  +  P+++DWRK+  VT 
Sbjct: 79  LGVNALADMTHEEFRASGNTFKIPPNLGLRSETTSFRHQNVTRI--PSTMDWRKKRTVTH 136

Query: 157 VKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFE 216
           +K+Q QCG CWAFSAVAA+EGI KL+T K +SLSEQELVDCD+   N GC GG M+ AF+
Sbjct: 137 IKNQLQCGGCWAFSAVAAMEGIAKLQTSKSISLSEQELVDCDIFGSNIGCEGGCMDDAFK 196

Query: 217 FITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------------------ 258
           FI +  G+ +E  Y Y+G    C   K    A  I  YE +P                  
Sbjct: 197 FIIQNRGLNSEARYLYKGVEGHCNKKKESSRAARINDYENMPEFSEKALLKVVAHQPISV 256

Query: 259 ----ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYI 313
                  AFQ Y  G+     G+ L++GVT  GYG    G+K+WLVKNSWGT WGE GY 
Sbjct: 257 AIDAGGSAFQFYEIGIITXESGNDLDYGVTTDGYGRSADGKKHWLVKNSWGTDWGENGYT 316

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
           RM R   ++  G+CG  MQASYP 
Sbjct: 317 RMERGVKATT-GLCGFTMQASYPT 339


>gi|386648114|gb|AFJ15104.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 323

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 184/323 (56%), Gaps = 41/323 (12%)

Query: 48  GYPQKYDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK 104
           GY Q  D  S+E     FE+W  +  + Y + DE   RF I+  N+ YID  N +N S+ 
Sbjct: 6   GYSQD-DLTSIERLVRLFESWTLENDKIYKNIDEKIYRFEIFKDNLMYIDETNKKNSSYW 64

Query: 105 LTDNKFADLSNEEFISTYLG-------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
           L  N+FADL+++EF + Y+G         +  ++  +P    +  P S+DWR++GAVTPV
Sbjct: 65  LGLNEFADLTHDEFKAKYVGSLGEDSTIIEQSDDEEFPYKHVVDYPESIDWRQKGAVTPV 124

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+Q  CGSCWAFS VA VEGINK+ TGKL+SLSEQEL+DCD  S   GC GGY   + ++
Sbjct: 125 KNQNPCGSCWAFSTVATVEGINKIVTGKLISLSEQELLDCDRRS--HGCKGGYQTTSLQY 182

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------- 260
           +    GV TE +YPY  K  +C+    K   V ITGY+ +PA                  
Sbjct: 183 VAD-NGVHTEKEYPYEKKQGKCRAKDKKGSKVKITGYKRVPANNEVSLIQAIANQPVSVV 241

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
                 AFQ Y  G+F+  CG +++H VT VGYG++    Y L+KNSWG  WGE GYIR+
Sbjct: 242 VESKGRAFQFYKGGIFEGPCGTKVDHAVTAVGYGKN----YILIKNSWGPKWGEKGYIRI 297

Query: 316 ARNSPSSNIGICGILMQASYPVK 338
            R S  S  G CG+   + +P K
Sbjct: 298 KRASGKSK-GTCGVYSSSYFPTK 319


>gi|2224810|emb|CAB09698.1| cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 134/316 (42%), Positives = 182/316 (57%), Gaps = 40/316 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSN 115
           +M  R E W+ ++ R Y +E+E  RR  ++ +N + ID  NS ++ + +L  N+FADL++
Sbjct: 39  AMVSRHEKWMAEHGRTYANEEEKARRLEVFRANAKLIDSFNSAEDSTHRLATNRFADLTD 98

Query: 116 EEFISTYLGYNKPYNEP----------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EEF +   G  +P              R+ +        S+DWR  GAVT VKDQG CG 
Sbjct: 99  EEFRAARTGLRRPPAAAAGAGSGAGGFRYENFSLADAAGSMDWRAMGAVTGVKDQGSCGC 158

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSAVAAVEG+ K++TG+LVSLSEQ+LVDCDV  +++GC GG M+ AFE++   GG+T
Sbjct: 159 CWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCDVYGDDEGCAGGLMDNAFEYMINRGGLT 218

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF 263
           TE  YPYRG +  C+   +   A +I GYE +PA                         F
Sbjct: 219 TESSYPYRGTDGSCRRSAS---AASIRGYEDVPANNEAALMAAVAHQPVSVAINGGDSVF 275

Query: 264 QLYSHGVF-DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           + Y  GV     CG +LNH +T  GYG    G KYW++KNSWG SWGE GY+R+ R    
Sbjct: 276 RFYDSGVLGGSGCGTELNHAITAAGYGTASDGTKYWIMKNSWGGSWGEGGYVRIRRGVRG 335

Query: 322 SNIGICGILMQASYPV 337
              G+CG+   ASYPV
Sbjct: 336 E--GVCGLAQLASYPV 349


>gi|300122868|emb|CBK23875.2| unnamed protein product [Blastocystis hominis]
          Length = 316

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 194/332 (58%), Gaps = 47/332 (14%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREY-GSEDEWQRRFGIYSSNV 90
            F+L+ + +     S+ Y +K         F+ +  +Y + Y  SE E++++   Y  N+
Sbjct: 5   FFVLFAVALSLNLHSDAYYEKL--------FQTFEAKYGKNYLSSEREYRKKVLAY--NM 54

Query: 91  QYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG--YNKPYNEPRWPSVQYLGLPASVDW 148
            +I+  NS   SF L    FAD++N EF ++ L     KP N  +   +  + +  S+DW
Sbjct: 55  DWIEKFNSDEHSFTLGMTPFADMTNTEFATSKLCGCMKKPLNHKQARVLNNMAVE-SIDW 113

Query: 149 RKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG 208
           R++GAVTPVK+QG CGSCWAFSA  A+EG N + TGKLVSLSEQ+LVDCD  +E+ GC G
Sbjct: 114 REKGAVTPVKNQGSCGSCWAFSATGALEGGNFVATGKLVSLSEQQLVDCD--TEDAGCGG 171

Query: 209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------- 260
           G+M+ AFE++ K  G+ TE+DYPY  K++ C+ D+     ++ITGYE +PA         
Sbjct: 172 GFMDTAFEYVMK-KGLCTEEDYPYHAKDEDCKDDQCT-SVISITGYEDVPANDGVALKQA 229

Query: 261 --------------YAFQLYSHGVFD-EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGT 305
                         + FQ+Y+ GV D + CG  LNHGV  VGY ++    Y +VKNSWG 
Sbjct: 230 LTKAPVSVAIQADSFVFQMYTGGVLDSDMCGTSLNHGVLAVGYAKE----YIIVKNSWGA 285

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWG+ GY+++A        GICGI M ASYP 
Sbjct: 286 SWGDKGYVKIAHRDQGE--GICGINMAASYPT 315


>gi|297826875|ref|XP_002881320.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327159|gb|EFH57579.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 186/317 (58%), Gaps = 39/317 (12%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFA 111
           ++P S+E + E W+ ++SR Y  E E Q R  ++  N+++I+  N + N S+KL  N+FA
Sbjct: 31  HEPSSLE-KHEQWMARFSRVYRDELEKQMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFA 89

Query: 112 DLSNEEFISTYLGY--------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
           D +NEEF++ + G         ++  +   W     +G+  S DWR EGAVTPVK QGQC
Sbjct: 90  DWTNEEFLAIHTGLKGLSSKVVDETISSRSWNISDMVGV--SKDWRAEGAVTPVKYQGQC 147

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           G CWAFSAVAAVEG+ K+  G LVSLSEQ+L+DCD    ++GC+GG M  AF +I +  G
Sbjct: 148 GCCWAFSAVAAVEGVTKIAGGNLVSLSEQQLLDCD-REYDRGCDGGIMSDAFNYIIQNRG 206

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY---------------------- 261
           + +E+DY Y+G + RC++  +   A  I+G++ +P+                        
Sbjct: 207 IASENDYSYQGSDGRCRS--SARPAARISGFQTVPSNNEQALLEAVSRQPVSVSMDANGD 264

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSP 320
            F  YS GV+D  CG   NH VT VGYG    G KYWL KNSWG +WGE GYIR+ R+  
Sbjct: 265 GFMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEKGYIRIRRDVA 324

Query: 321 SSNIGICGILMQASYPV 337
               G+CG+   A YPV
Sbjct: 325 WPQ-GMCGVAQYAFYPV 340


>gi|223946391|gb|ACN27279.1| unknown [Zea mays]
          Length = 279

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 124/220 (56%), Positives = 143/220 (65%), Gaps = 27/220 (12%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +PASVDWR++GAVT VKDQGQCGSCWAFS +AAVEGIN +KT  L SLSEQ+LVDCD  +
Sbjct: 43  VPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKA 102

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N GCNGG M+ AF++I K GGV  ED YPYR +   C+  K+    VTI GYE +PA  
Sbjct: 103 -NAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQASCK--KSPAPVVTIDGYEDVPAND 159

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWL 298
                                  FQ YS GVF   CG +L+HGV  VGYG    G KYWL
Sbjct: 160 ESALKKAVAHQPVSVAIEASGSHFQFYSEGVFSGRCGTELDHGVAAVGYGVTADGTKYWL 219

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSWG  WGE GYIRMAR+  +   G CGI M+ASYPVK
Sbjct: 220 VKNSWGPEWGEKGYIRMARDVAAKE-GHCGIAMEASYPVK 258


>gi|22093636|dbj|BAC06931.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|50510021|dbj|BAD30633.1| putative cysteine proteinase [Oryza sativa Japonica Group]
          Length = 352

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 182/318 (57%), Gaps = 42/318 (13%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           +ME R + W+ ++ R Y    E  RRF ++ +NV  ID  N+  N  ++L  N+F DL++
Sbjct: 37  TMEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLIDRSNAAGNKRYRLATNRFTDLTD 96

Query: 116 EEFISTYLGYN------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
            EF + Y GYN         N     S +    PA VDWR++GAVT VK+Q  CG CWAF
Sbjct: 97  AEFAAMYTGYNPANTMYAAANATTRLSSEDDQQPAEVDWRQQGAVTGVKNQRSCGCCWAF 156

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S VAAVEGI+++ TG+LVSLSEQ+L+DC   ++N GC GG ++ AF+++   GGVTTE  
Sbjct: 157 STVAAVEGIHQITTGELVSLSEQQLLDC---ADNGGCTGGSLDNAFQYMANSGGVTTEAA 213

Query: 230 YPYRGKNDRCQTD---KTKHHAVTITGYEAI---------------PARYA-------FQ 264
           Y Y+G    CQ D        A TI+GY+ +               P   A       F+
Sbjct: 214 YAYQGAQGACQFDASSSASGVAATISGYQRVNPNDEGSLAAAVASQPVSVAIEGSGAMFR 273

Query: 265 LYSHGVFD-EYCGHQLNHGVTVVGYGEDH----GEKYWLVKNSWGTSWGEAGYIRMARNS 319
            Y  GVF  + CG +L+H V VVGYG +     G  YW++KNSWGT+WG+ GY+++ ++ 
Sbjct: 274 HYGSGVFTADSCGTKLDHAVAVVGYGAEADGSGGGGYWIIKNSWGTTWGDGGYMKLEKDV 333

Query: 320 PSSNIGICGILMQASYPV 337
            S   G CG+ M  SYPV
Sbjct: 334 GSQ--GACGVAMAPSYPV 349


>gi|7523482|dbj|BAA94210.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|10800060|dbj|BAB16480.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 178/313 (56%), Gaps = 38/313 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEF 118
           + FE W+ ++ ++Y    E + RFG++  NV++I  Y      +  L  N+FADL+N+EF
Sbjct: 39  QMFEEWMAKFGKKYPCHGEKEYRFGVFRDNVRFIRSYRPPAGYNSALRVNQFADLTNDEF 98

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
           +ST+ G   P  +     V  + LP  +DWR +GAVT VKDQG CGSCWAF+AVAA+EG+
Sbjct: 99  VSTHTGAKPPCPKDAPRGVDPIWLPCCIDWRYKGAVTDVKDQGACGSCWAFAAVAAIEGL 158

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
            +++TGKL  LSEQELVDCD  S   GC GG+ ++AFE +   GG+T E  Y Y G   +
Sbjct: 159 TQIRTGKLTPLSEQELVDCDTGS--SGCAGGHTDRAFELVAAKGGITAESGYRYEGYRGK 216

Query: 239 CQTDKTK-HHAVTITGYEAIP-----------ARY-----------AFQLYSHGVFDEYC 275
           C+ D    +HA  I G+ A+P           AR            AFQ Y  GVF   C
Sbjct: 217 CRADDALFNHAARIGGHRAVPPGDERQLATAVARQPVTAYIDASGPAFQFYGSGVFPGPC 276

Query: 276 GH---------QLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           G            NH VT+VGY +D   G+KYW+ KNSWG +WGE GYI + ++  S + 
Sbjct: 277 GSGSGAAAAAPTTNHAVTLVGYCQDGASGKKYWVAKNSWGKTWGEKGYILLEKDVASPH- 335

Query: 325 GICGILMQASYPV 337
           G CG+ +   YP 
Sbjct: 336 GTCGVAVSPFYPT 348


>gi|413938554|gb|AFW73105.1| hypothetical protein ZEAMMB73_931917 [Zea mays]
          Length = 361

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 183/327 (55%), Gaps = 39/327 (11%)

Query: 48  GYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTD 107
           GY Q+ D       F +W  ++ + Y S  E   R+ I+  N+ +I   N +N S+ L  
Sbjct: 31  GYSQE-DLALPSSLFRSWSVKHGKLYASPTEKLERYEIFKQNLMHIAETNRKNGSYWLGL 89

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----------GLPASVDWRKEGAVTP 156
           N+FAD+++EEF ++YLG  +       P  +              LP SVDWR +GAVTP
Sbjct: 90  NQFADVAHEEFKASYLGLKRALPRAGAPQTRTPTAFRYAAAAAGSLPWSVDWRYKGAVTP 149

Query: 157 VKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFE 216
           VK+QG+CGSCWAFS+VAAVEGIN++ TGKLVSLSEQELVDCD  + + GC GG M+ AF 
Sbjct: 150 VKNQGKCGSCWAFSSVAAVEGINQIVTGKLVSLSEQELVDCD-TTLDHGCEGGTMDLAFA 208

Query: 217 FITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT---ITGYEAIP--------------- 258
           ++    G+  EDDYPY  +   C+  +     +T   +TG+E +P               
Sbjct: 209 YMMGSQGIHAEDDYPYLMEEGYCKEKQPCVLGITEQDLTGFEDVPENSEISLLKALAHQP 268

Query: 259 -------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAG 311
                      FQ Y  GVFD  C  +L+H +T VGYG  +G+ Y  +KNSWG +WGE G
Sbjct: 269 VSVGIAAGSRDFQFYRGGVFDGACSVELDHALTAVGYGSSYGQNYITMKNSWGKNWGEQG 328

Query: 312 YIRMARNSPSSNIGICGILMQASYPVK 338
           Y+R+   +     G+CGI   ASYPVK
Sbjct: 329 YVRIKMGTGKPE-GVCGIYTMASYPVK 354


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 175/315 (55%), Gaps = 38/315 (12%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADL 113
           P +ME  FE W + + + Y    E   R  ++ +N   +D  N   + S+ L  N FADL
Sbjct: 25  PLNME--FEAWKRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADL 82

Query: 114 SNEEFISTYLGYNKPYNEPR-------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           ++EEF   YLG     N PR        P+     LP SVDWR  G VTPVKDQGQCGSC
Sbjct: 83  THEEFKRFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCGSC 142

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FS   +VEG +  KTG+LVSLSEQ LVDC     NQGCNGG M+ AF++I    G+ T
Sbjct: 143 WSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGIDT 202

Query: 227 EDDYPYRGKNDRCQ-------------------TDKTKHHAVTITGYEAI---PARYAFQ 264
           E  YPY  K+  C+                   ++    +AV   G  ++    ++ +FQ
Sbjct: 203 EASYPYTAKDGTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNSFQ 262

Query: 265 LYSHGVFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           LY+ GV++E       L+HGV   GYG  +G  YWLVKNSWG+SWG+AGYI M+RN+ + 
Sbjct: 263 LYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMSRNANNQ 322

Query: 323 NIGICGILMQASYPV 337
               CGI   ASYP+
Sbjct: 323 ----CGIATSASYPI 333


>gi|218198967|gb|EEC81394.1| hypothetical protein OsI_24614 [Oryza sativa Indica Group]
          Length = 342

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 182/318 (57%), Gaps = 42/318 (13%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           +ME R + W+ ++ R Y    E  RRF ++ +NV  ID  N+  N  ++L  N+F DL++
Sbjct: 27  TMEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLIDRSNAAGNKRYRLATNRFTDLTD 86

Query: 116 EEFISTYLGYN------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
            EF + Y GYN         N     S +    PA VDWR++GAVT VK+Q  CG CWAF
Sbjct: 87  AEFAAMYTGYNPANTMYAAANATTRLSSEDDQQPAEVDWRQQGAVTGVKNQRSCGCCWAF 146

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S VAAVEGI+++ TG+LVSLSEQ+L+DC   ++N GC GG ++ AF+++   GGVTTE  
Sbjct: 147 STVAAVEGIHQITTGELVSLSEQQLLDC---ADNGGCTGGSLDNAFQYMANSGGVTTEAA 203

Query: 230 YPYRGKNDRCQTD---KTKHHAVTITGYEAI---------------PARYA-------FQ 264
           Y Y+G    CQ D        A TI+GY+ +               P   A       F+
Sbjct: 204 YAYQGAQGACQFDASSSASGVAATISGYQRVNPNDEGSLAAAVASQPVSVAIEGSGAMFR 263

Query: 265 LYSHGVFD-EYCGHQLNHGVTVVGYGEDH----GEKYWLVKNSWGTSWGEAGYIRMARNS 319
            Y  GVF  + CG +L+H V VVGYG +     G  YW++KNSWGT+WG+ GY+++ ++ 
Sbjct: 264 HYGSGVFTADSCGTKLDHAVAVVGYGAEADGSGGGGYWIIKNSWGTTWGDGGYMKLEKDV 323

Query: 320 PSSNIGICGILMQASYPV 337
            S   G CG+ M  SYPV
Sbjct: 324 GSQ--GACGVAMAPSYPV 339


>gi|255546708|ref|XP_002514413.1| cysteine protease, putative [Ricinus communis]
 gi|223546510|gb|EEF48009.1| cysteine protease, putative [Ricinus communis]
          Length = 324

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/306 (42%), Positives = 168/306 (54%), Gaps = 45/306 (14%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
             + E FE+W+ ++ + Y S +E   R  ++  N+ +ID  N    ++ L  N+FADLS+
Sbjct: 41  HKLTELFESWMSKHGKTYESIEEKLHRLEVFKDNLMHIDRRNRDVTTYWLALNEFADLSH 100

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           EEF S                       A +   ++GAV PVK+QG CGSCWAFS VAAV
Sbjct: 101 EEFKSKL---------------------AQIRRLEKGAVAPVKNQGSCGSCWAFSTVAAV 139

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EGIN++ TG L SLSEQEL+DCD  S N GCNGG M+ AF++I   GG+  E+DYPY  +
Sbjct: 140 EGINQIVTGNLTSLSEQELIDCDT-SFNSGCNGGLMDYAFDYIVNNGGLHKEEDYPYLME 198

Query: 236 NDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHGVFDE 273
              C   + +   VTI+GY  +P                      +   FQ Y  GVF+ 
Sbjct: 199 EGTCDEKREEMEVVTISGYHDVPENNEESLLKALAHQPLSIAIEASGRDFQFYGRGVFNG 258

Query: 274 YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
            CG  L+HGV  VGYG   G  Y +VKNSWG  WGE GYIRM RN+     G+CGI   A
Sbjct: 259 PCGTDLDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPE-GLCGINKMA 317

Query: 334 SYPVKR 339
           SYP K+
Sbjct: 318 SYPTKK 323


>gi|424513619|emb|CCO66241.1| predicted protein [Bathycoccus prasinos]
          Length = 396

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 186/331 (56%), Gaps = 55/331 (16%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTD----NKFADL 113
           +E+ F+ WL +Y +E  + +E  +R  I+  N  ++   N++ ++ K++     NKFA  
Sbjct: 68  IEDAFDAWLVKYDKEIANAEERLKRLKIFGENYLFVLEHNAKYVAGKVSHYVEMNKFAAH 127

Query: 114 SNEEFISTYLGYNKPYNEPR-----------WPSVQYLGL--PASVDWRKEGAVTPVKDQ 160
           + EE+    LG+ K     +           W   +Y G+  P S+DW  EG +T  K+Q
Sbjct: 128 TREEY-RKMLGFKKSLRRKKDSGEAAKDVSLW---EYEGVEAPESIDWVDEGVITTPKNQ 183

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFSA+ AVEGIN ++TGKLVSLSEQELV C     NQGCNGG M+ AFE+I +
Sbjct: 184 GSCGSCWAFSAIGAVEGINAIRTGKLVSLSEQELVSCAREGGNQGCNGGLMDNAFEWIVE 243

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA--------------------- 259
            GGV +E  Y Y+   D C+T KT  H  +I G+  +P+                     
Sbjct: 244 NGGVDSEKQYQYKASFDDCKTRKTLLHIASIDGFNDVPSNDETALKKAVSQQPVSVAIEA 303

Query: 260 -RYAFQLYSHGVFD-EYCGHQLNHGVTVVGYGEDHG----------EKYWLVKNSWGTSW 307
            + +FQLY  GV+  E CG QL+HGV VVGYG DH           +KYW +KNSW   W
Sbjct: 304 DQRSFQLYGGGVYHAEDCGTQLDHGVLVVGYGIDHNSSNVIIPGATKKYWKIKNSWSEQW 363

Query: 308 GEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           GE GYIR+AR+  S + G+CG+   ASYP K
Sbjct: 364 GEGGYIRIARDVESPS-GMCGVAEMASYPEK 393


>gi|212275830|ref|NP_001130503.1| cysteine protease 1 [Zea mays]
 gi|194689328|gb|ACF78748.1| unknown [Zea mays]
 gi|219886279|gb|ACL53514.1| unknown [Zea mays]
 gi|238010470|gb|ACR36270.1| unknown [Zea mays]
 gi|413920875|gb|AFW60807.1| cysteine protease 1 [Zea mays]
          Length = 354

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 197/358 (55%), Gaps = 46/358 (12%)

Query: 17  IAIDMRMMLRNAV-LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGS 75
           I ++  ++   AV L++  +  +   A   S      Y  ++M+ R + W+ ++ R Y  
Sbjct: 5   IVVNKTVITFTAVALTILAVTTMMAEARDLSSTSTGGYGEEAMKVRHQQWMAEHGRTYRD 64

Query: 76  EDEWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNK-PYNE 131
           E E   RF ++ +N  ++D  N+      S++L  N+FAD++N+EF++ Y G    P   
Sbjct: 65  EAEKAHRFQVFKANADFVDASNAAGDDKKSYRLELNEFADMTNDEFMAMYTGLRPVPAGA 124

Query: 132 PRWPSVQYLGLPAS--------VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
            +    +Y  +  S        VDWR++GAVT +K+QGQCG CWAF+AVAAVEGI+++ T
Sbjct: 125 KKMAGFKYGNVTLSDADDDQQTVDWRQKGAVTGIKNQGQCGCCWAFAAVAAVEGIHQITT 184

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G LVSLSEQ+++DCD +  N GCNGGY++ AF++I   GG+ TED YPY      CQ   
Sbjct: 185 GNLVSLSEQQVLDCDTDGNN-GCNGGYIDNAFQYIVGNGGLGTEDAYPYTAAQAMCQ--- 240

Query: 244 TKHHAVTITGYEAIPA--------------------RYAFQLYSHGVFDEY-CGH--QLN 280
           +      I+GY+ +P+                     + FQLY  GV     C     LN
Sbjct: 241 SVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDAHNFQLYGGGVMTAASCSTPPNLN 300

Query: 281 HGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           H VT VGYG  + G  YWL+KN WG +WGE GY+R+ R + +     CG+  QASYPV
Sbjct: 301 HAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLRLERGANA-----CGVAQQASYPV 353


>gi|125604306|gb|EAZ43631.1| hypothetical protein OsJ_28254 [Oryza sativa Japonica Group]
          Length = 369

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/308 (42%), Positives = 174/308 (56%), Gaps = 36/308 (11%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +++ E +E W  Q+  +R+ G   E  RRF ++  NV+ I   N ++  +KL  N+F D+
Sbjct: 42  EALWELYERWRGQHRVARDLG---EKARRFNVFKDNVRLIHEFNRRDEPYKLRLNRFGDM 98

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           + +E    Y      ++        + G       R  GAV  VKDQGQCGSCWAFS +A
Sbjct: 99  TADESAGAYASSRVSHHR------MFRGRGEKAQ-RLHGAVGAVKDQGQCGSCWAFSTIA 151

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           AVEGIN ++T  L +LSEQ+LVDCD  + N GC+GG M+ AF++I K GGV     YPYR
Sbjct: 152 AVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQYIAKHGGVAASSAYPYR 211

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------FQLYSHGVF 271
            +   C++      AVTI GYE +PA                         FQ YS GVF
Sbjct: 212 ARQSSCKSSAASSPAVTIDGYEDVPANSESALKKAVANQPVSVAIEAGGSHFQFYSEGVF 271

Query: 272 DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
              CG +L+HGV  VGYG    G KYW+V+NSWG  WGE GYIRM R+  S+  G+CGI 
Sbjct: 272 AGKCGTELDHGVAAVGYGTTVDGTKYWIVRNSWGADWGEKGYIRMKRDV-SAKEGLCGIA 330

Query: 331 MQASYPVK 338
           M+ASYP+K
Sbjct: 331 MEASYPIK 338


>gi|218187750|gb|EEC70177.1| hypothetical protein OsI_00904 [Oryza sativa Indica Group]
 gi|222617983|gb|EEE54115.1| hypothetical protein OsJ_00884 [Oryza sativa Japonica Group]
          Length = 327

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 178/313 (56%), Gaps = 38/313 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-DYINSQNLSFKLTDNKFADLSNEEF 118
           + FE W+ ++ ++Y    E + RFG++  NV++I  Y      +  L  N+FADL+N+EF
Sbjct: 17  QMFEEWMAKFGKKYPCHGEKEYRFGVFRDNVRFIRSYRPPAGYNSALRVNQFADLTNDEF 76

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
           +ST+ G   P  +     V  + LP  +DWR +GAVT VKDQG CGSCWAF+AVAA+EG+
Sbjct: 77  VSTHTGAKPPCPKDAPRGVDPIWLPCCIDWRYKGAVTDVKDQGACGSCWAFAAVAAIEGL 136

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
            +++TGKL  LSEQELVDCD  S   GC GG+ ++AFE +   GG+T E  Y Y G   +
Sbjct: 137 TQIRTGKLTPLSEQELVDCDTGS--SGCAGGHTDRAFELVAAKGGITAESGYRYEGYRGK 194

Query: 239 CQTDKTK-HHAVTITGYEAIP-----------ARY-----------AFQLYSHGVFDEYC 275
           C+ D    +HA  I G+ A+P           AR            AFQ Y  GVF   C
Sbjct: 195 CRADDALFNHAARIGGHRAVPPGDERQLATAVARQPVTAYIDASGPAFQFYGSGVFPGPC 254

Query: 276 GH---------QLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           G            NH VT+VGY +D   G+KYW+ KNSWG +WGE GYI + ++  S + 
Sbjct: 255 GSGSGAAAAAPTTNHAVTLVGYCQDGASGKKYWVAKNSWGKTWGEKGYILLEKDVASPH- 313

Query: 325 GICGILMQASYPV 337
           G CG+ +   YP 
Sbjct: 314 GTCGVAVSPFYPT 326


>gi|167526493|ref|XP_001747580.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774026|gb|EDQ87660.1| predicted protein [Monosiga brevicollis MX1]
          Length = 330

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/284 (45%), Positives = 168/284 (59%), Gaps = 38/284 (13%)

Query: 83  FGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTY-----LGYNKPYNEPRWPSV 137
           F  + +N++ I+  N+ N SF +   +FADL+  EF S Y     +   +P NE  W + 
Sbjct: 48  FRCHLANLRVIEAHNAGNSSFTMGITQFADLTAAEF-SAYVKRFPMNVTRPRNE-VWITE 105

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
             L     VDWR++ AVT +K+QGQCGSCW+FS   +VEG + + TGKLVSLSEQ+L+DC
Sbjct: 106 APL---QEVDWRQKNAVTEIKNQGQCGSCWSFSTTGSVEGAHAIATGKLVSLSEQQLMDC 162

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                N GCNGG M+ AFE++   GG+ TE+DYPY  ++ +C T+K K HA  I G+  +
Sbjct: 163 STRYGNHGCNGGLMDYAFEYVIANGGLDTEEDYPYTAEDGKCNTEKEKKHAAEIHGFRNV 222

Query: 258 PARY----------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK 295
           P  +                       FQ Y+ GVFD  CG  L+HGV VVGY +D    
Sbjct: 223 PKEHEDQLAAAVSIGPVSVAIEADQAGFQHYTSGVFDGKCGTSLDHGVLVVGYSDD---- 278

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           YW+VKNSWG SWGE GYIR+ R       G+CGI MQASYP KR
Sbjct: 279 YWIVKNSWGKSWGEEGYIRLKRGVDKK--GMCGITMQASYPEKR 320


>gi|401397136|ref|XP_003879989.1| cathepsin L, related [Neospora caninum Liverpool]
 gi|325114397|emb|CBZ49954.1| cathepsin L, related [Neospora caninum Liverpool]
          Length = 415

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/294 (42%), Positives = 169/294 (57%), Gaps = 38/294 (12%)

Query: 59  EERFEN----WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           EE F+N    +   Y + Y +E+E Q+R+ I+ +N+ YI   N Q  S+ L  N F DLS
Sbjct: 112 EEHFQNAFGSFRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSYSLKMNHFGDLS 171

Query: 115 NEEFISTYLGYNKPYN--------EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
            EEF   YLGYNK  N              V    +P++VDWR++G VTPVKDQ  CGSC
Sbjct: 172 REEFRRKYLGYNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVTPVKDQRDCGSC 231

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA  A+EG +  KTG+L+SLSEQELVDC +   NQGC+GG M  AF+++   GG+ +
Sbjct: 232 WAFSATGALEGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCS 291

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQ 264
           E+ YPY  ++  C+    K   VTI+G++ +P +                        FQ
Sbjct: 292 EEGYPYLARDGECKRACKK--VVTISGFKDVPRKSETAMKAALAHSPVSIAIEADQLPFQ 349

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEK--YWLVKNSWGTSWGEAGYIRMA 316
            Y  GVFD  CG  L+HGV +VGYG D   K  +W++KNSWG+ WG  GY+ MA
Sbjct: 350 FYHEGVFDASCGTDLDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYMYMA 403


>gi|226502454|ref|NP_001140922.1| hypothetical protein [Zea mays]
 gi|223948637|gb|ACN28402.1| unknown [Zea mays]
 gi|413920877|gb|AFW60809.1| hypothetical protein ZEAMMB73_830238 [Zea mays]
          Length = 354

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/358 (37%), Positives = 196/358 (54%), Gaps = 46/358 (12%)

Query: 17  IAIDMRMMLRNAV-LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGS 75
           I ++  ++   AV L++  +  +   A   S      Y  ++M+ R + W+ ++ R Y  
Sbjct: 5   IVVNKTVIAFTAVALTILAVKTMMAEARDLSSTSTGGYGEEAMKVRHQQWMAEHGRTYRD 64

Query: 76  EDEWQRRFGIYSSNVQYIDYINS---QNLSFKLTDNKFADLSNEEFISTYLGYNK-PYNE 131
           E E   RF ++ +N  ++D  N+      S+++  N+FAD++N+EF++ Y G    P   
Sbjct: 65  EAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFADMTNDEFMAMYTGLRPVPAGA 124

Query: 132 PRWPSVQYLGLPAS--------VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKT 183
            +    +Y  +  S        VDWR++GAVT +K+QGQCG CWAF+AVAAVEGI+++ T
Sbjct: 125 KKMAGFKYGNVTLSDADDNQQTVDWRQKGAVTGIKNQGQCGCCWAFAAVAAVEGIHQITT 184

Query: 184 GKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 243
           G LVSLSEQ+++DCD    N GCNGGY++ AF++I   GG+ TED YPY      CQ   
Sbjct: 185 GNLVSLSEQQVLDCDTEGNN-GCNGGYIDNAFQYIAGNGGLATEDAYPYTAAQAMCQ--- 240

Query: 244 TKHHAVTITGYEAIPA--------------------RYAFQLYSHGVFDEY-CGH--QLN 280
           +      I+GY+ +P+                     + FQLY  GV     C     LN
Sbjct: 241 SVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDAHNFQLYGGGVMTAASCSTPPNLN 300

Query: 281 HGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           H VT VGYG  + G  YWL+KN WG +WGE GY+R+ R + +     CG+  QASYPV
Sbjct: 301 HAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLRLERGANA-----CGVAQQASYPV 353


>gi|116794072|gb|ABK26996.1| unknown [Picea sitchensis]
          Length = 367

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 180/320 (56%), Gaps = 46/320 (14%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFIS 120
           F+ WL ++ + YGS +E  RR  I+ +N+QYI   N + N SF+L  NKFADL+NEEF +
Sbjct: 43  FDRWLGRHGKLYGSHEEKARRLQIFRTNLQYIHAHNKNSNSSFRLGLNKFADLTNEEFKT 102

Query: 121 TYLGYN-KPYNEPRWPSVQYLGL-----------------PASVDWRKEGAVTPVKDQGQ 162
            Y G N K + + R   ++   L                  +S+DWRK+GAVT VKDQ Q
Sbjct: 103 RYFGKNSKQWRDRRRTELEGAELRPVLKQTVGSQSSSCSIASSLDWRKKGAVTGVKDQAQ 162

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   A+EG+N + TGKLVSLSEQELV CD  + N GC GG M+ AF ++ + G
Sbjct: 163 CGSCWAFSTTGAIEGVNFISTGKLVSLSEQELVACD--ATNYGCEGGDMDYAFTWVIQNG 220

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARY 261
           G+ TE DY Y G +  C T+K     V+I GY  +                      +  
Sbjct: 221 GIDTEKDYSYTGVDSTCNTNKEAKKIVSIDGYTDVSPDDSALLCAAGSQPVSVGIDGSAI 280

Query: 262 AFQLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
            FQLY+ G++D  C      ++H V VVGY   +G+ YW+VKNSWGT WG  GY  + RN
Sbjct: 281 DFQLYTGGIYDGDCSGNPDDIDHAVLVVGYSAKNGKDYWIVKNSWGTDWGLEGYFYILRN 340

Query: 319 SPSSNIGICGILMQASYPVK 338
           +     G+C I   ASYP K
Sbjct: 341 TELP-YGVCAINAMASYPTK 359


>gi|422001787|dbj|BAM66994.1| germination-specific cysteine protease 1, partial [Raphanus
           sativus]
          Length = 235

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 115/219 (52%), Positives = 141/219 (64%), Gaps = 23/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP +VDWR++GAV  +K+QG CGSCWAFS  A VEGINK+ TG+L+SLSEQELVDCD  S
Sbjct: 4   LPETVDWRQKGAVNAIKNQGTCGSCWAFSTAAVVEGINKIVTGELISLSEQELVDCD-KS 62

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            NQGCNGG M+ AF+FI K GG+ TE DYPYRG + +C +       VTI GYE +P   
Sbjct: 63  YNQGCNGGLMDYAFQFIMKNGGLNTEQDYPYRGSDGKCNSLLKNSKVVTIDGYEDVPTND 122

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                  FQ Y  G+F   CG +++H V  VGYG ++G  YW+V
Sbjct: 123 ETALKRAVSYQPVSVAIDAGGRVFQHYQSGIFTGECGTKMDHAVVAVGYGSENGVDYWIV 182

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +NSWG  WGE GYIR+ RN  SS  G CGI ++ASYPVK
Sbjct: 183 RNSWGQKWGEDGYIRIERNLASSKSGKCGIAIEASYPVK 221


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 193/341 (56%), Gaps = 40/341 (11%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           MR++L  A++  FL+    I   + +  + QK      +  F+NW+ ++ + Y + DE+ 
Sbjct: 1   MRLVL--ALIFCFLI----INCCSAARIFSQK----QYQTAFQNWMVKHQKSY-TNDEFG 49

Query: 81  RRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL 140
            R+ ++  N+  +   N +  +  L  N  ADL+NEEF   YLG        +   V   
Sbjct: 50  SRYSVFQDNMDIVAKWNQKGSNTILGLNVMADLTNEEFKKLYLGTKANVTYKKKTLVGVS 109

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
           GLPASVDWR  GAVT VK+QGQCG C+AFS   +VEGI+++ + +LV LSEQ+++DC  +
Sbjct: 110 GLPASVDWRANGAVTAVKNQGQCGGCYAFSTTGSVEGIHEITSQQLVPLSEQQILDCSGS 169

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI--- 257
             N GC+GG M  +FE+I  +GG+ TE  YPY G+  +C+ +K K+   TITGY+ +   
Sbjct: 170 EGNNGCDGGLMTNSFEYIIAVGGLDTEASYPYTGEVGKCKFNK-KNIGATITGYKNVESG 228

Query: 258 -------------------PARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYGEDHGEKY 296
                               ++ +FQLY+ GV+   E    QL+HGV  VGYG   G+ Y
Sbjct: 229 SESDLQTAVAAQPVSVAIDASQSSFQLYASGVYYEPECSSTQLDHGVLAVGYGSQSGQDY 288

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           W+VKNSWG  WGE G+I MARN  ++    CGI   AS+P 
Sbjct: 289 WIVKNSWGADWGENGFILMARNKDNN----CGIATMASFPT 325


>gi|156142226|gb|ABU51882.1| ervatamin-C precursor [Tabernaemontana divaricata]
          Length = 365

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 179/314 (57%), Gaps = 43/314 (13%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + ++E +E WL ++ + Y    E+++RF I+  N+++ID  NS+N ++K+    + DL+N
Sbjct: 39  EEVKEIYELWLAKHDKVYSGLVEYEKRFEIFKDNLKFIDEHNSENHTYKMGLTPYTDLTN 98

Query: 116 EEFISTYLG--------YNKPYN-EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           EEF + YLG          +  N   R+       LP  +DWRK+GAVTPVK+QG+CGSC
Sbjct: 99  EEFQAIYLGTRSDTIHRLKRTINISERYAYEAGDNLPEQIDWRKKGAVTPVKNQGKCGSC 158

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS V+ VE IN+++TG L+SLSEQ+LVDC  N +N GC GG    A+++I   GG+ T
Sbjct: 159 WAFSTVSTVESINQIRTGNLISLSEQQLVDC--NKKNHGCKGGAFVYAYQYIIDNGGIDT 216

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E +YPY+     C+  K     V I GY+ +P                      +   FQ
Sbjct: 217 EANYPYKAVQGPCRAAK---KVVRIDGYKGVPHCNENALKKAVASQPSVVAIDASSKQFQ 273

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            Y  G+F   CG +LNHGV +VGY +D    YW+V+NSWG  WGE GYIRM R       
Sbjct: 274 HYKSGIFSGPCGTKLNHGVVIVGYWKD----YWIVRNSWGRYWGEQGYIRMKR---VGGC 326

Query: 325 GICGILMQASYPVK 338
           G+CGI     YP K
Sbjct: 327 GLCGIARLPYYPTK 340


>gi|301116794|ref|XP_002906125.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
 gi|262107474|gb|EEY65526.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
          Length = 535

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/315 (44%), Positives = 178/315 (56%), Gaps = 40/315 (12%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFAD 112
           P   E  F  W+K +S  +    E+ +R   Y +N  YI   N +N     KL  N+F+ 
Sbjct: 22  PLEYEHEFSAWMKTHSVSFSDALEFAKRLENYIANDMYIMEHNLENAWTGVKLDHNEFSS 81

Query: 113 LSNEEFISTYLGYNKP--YNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           +S EEF     GY  P  Y E R        W  VQ   +P SVDW+ +G VTPVK+QG 
Sbjct: 82  MSFEEFKFKMTGYVMPEGYLEQRLASRVDNLWSDVQ---VPDSVDWQDKGGVTPVKNQGM 138

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   AVEG   + +GKLVSLSEQELVDCD N +  GCNGG M+ AF +I   G
Sbjct: 139 CGSCWAFSTTGAVEGAAFVSSGKLVSLSEQELVDCDHNGD-MGCNGGLMDHAFAWIEDNG 197

Query: 223 GVTTEDDYPYRGKNDRCQ-------------TDKTKHHAVTITGYE-----AIPA-RYAF 263
           G+ +EDDY Y+ K   C+              +    HA+ +   +     AI A + AF
Sbjct: 198 GICSEDDYEYKAKAQVCRDCEKVVKISGFQDVNPQDEHALKVAVAQQPVSVAIEADQKAF 257

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR--NSPS 321
           Q Y  GVF+  CG +L+HGV  VGYG ++G+K+W VKNSWG+SWGE GYIR+AR  N P+
Sbjct: 258 QFYKSGVFNLTCGTRLDHGVLAVGYGSENGQKFWKVKNSWGSSWGEKGYIRLAREENGPA 317

Query: 322 SNIGICGILMQASYP 336
              G CGI    SYP
Sbjct: 318 ---GQCGIASVPSYP 329


>gi|357115272|ref|XP_003559414.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 360

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 177/325 (54%), Gaps = 46/325 (14%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL--------SFKLTDN 108
           +M  R E+W+ ++ R Y   +E  RR  I+ +N + ID  NS+          S +L  N
Sbjct: 38  AMASRHESWMAEHGRTYADAEEKARRLEIFRANAERIDSFNSKADAAAGESVDSHRLATN 97

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSVQY--------LGLPASVDWRKEGAVTPVKDQ 160
           +FADL++EEF +   G  +P          +             S+DWR  GAVT VKDQ
Sbjct: 98  RFADLTDEEFRAARTGLRRPAAVAGAVGGGFRYENFSLQADAAGSMDWRAMGAVTGVKDQ 157

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CG CWAFSAVAA+EG+ K++TG+LVSLSEQ+LVDCDV  ++QGC GG M+ AF++I++
Sbjct: 158 GSCGCCWAFSAVAAMEGLTKIRTGRLVSLSEQQLVDCDVYGDDQGCEGGLMDNAFQYISR 217

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ +E  YPY G++           A +I G+E +PA                     
Sbjct: 218 QGGLASESAYPYSGEDGGSCRSGRAQPAASIRGHEDVPANNEGALMAAVAHQPVSVAING 277

Query: 261 --YAFQLYSH----GVFDEYC-GHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGY 312
             Y F+ Y         +  C   +L+H +T VGYG    G  YWL+KNSWG+ WGE+GY
Sbjct: 278 GDYVFRFYDRGVLGAGGNGGCESTELDHAITAVGYGMAGDGTGYWLMKNSWGSGWGESGY 337

Query: 313 IRMARNSPSSNIGICGILMQASYPV 337
           +R+ R S     G+CG+   ASYPV
Sbjct: 338 VRIRRGSRGE--GVCGLAKLASYPV 360


>gi|66270077|gb|AAY43368.1| cysteine protease [Phytophthora infestans]
          Length = 510

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/315 (44%), Positives = 178/315 (56%), Gaps = 40/315 (12%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFAD 112
           P   E  F  W+K +S  +    E+ +R   Y +N  YI   N +N     KL  N+F+ 
Sbjct: 22  PLEYEHEFSAWMKTHSVSFSDALEFAKRLENYIANDMYIMEHNLENAWTGVKLDHNEFSS 81

Query: 113 LSNEEFISTYLGYNKP--YNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           +S EEF     GY  P  Y E R        W  VQ   +P SVDW+ +G VTPVK+QG 
Sbjct: 82  MSFEEFKFKMTGYVMPEGYLEQRLASRVDNLWSDVQ---VPDSVDWQDKGGVTPVKNQGM 138

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   AVEG   + +GKLVSLSEQELVDCD N +  GCNGG M+ AF +I   G
Sbjct: 139 CGSCWAFSTTGAVEGAAFVSSGKLVSLSEQELVDCDHNGD-MGCNGGLMDHAFAWIEDNG 197

Query: 223 GVTTEDDYPYRGKNDRCQ-------------TDKTKHHAVTITGYE-----AIPA-RYAF 263
           G+ +EDDY Y+ K   C+              +    HA+ +   +     AI A + AF
Sbjct: 198 GICSEDDYEYKAKAQVCRDCEKVVKISGFQDVNPQDEHALKVAVAQQPVSVAIEADQKAF 257

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR--NSPS 321
           Q Y  GVF+  CG +L+HGV  VGYG ++G+K+W VKNSWG+SWGE GYIR+AR  N P+
Sbjct: 258 QFYKSGVFNLTCGTRLDHGVLAVGYGSENGQKFWKVKNSWGSSWGEKGYIRLAREENGPA 317

Query: 322 SNIGICGILMQASYP 336
              G CGI    SYP
Sbjct: 318 ---GQCGIASVPSYP 329


>gi|386648112|gb|AFJ15103.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 348

 Score =  233 bits (594), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 191/339 (56%), Gaps = 45/339 (13%)

Query: 34  LLWVLGIPAGAWS-EGYPQKYDPQSMEER----FENWLKQYSREYGSEDEWQRRFGIYSS 88
           L+  +G+ +  +S  GY Q  D  +  ER    FE+W+ ++ R Y + +E   RF I+  
Sbjct: 17  LIVHVGLSSADFSIVGYSQ--DDLTSTERLIRLFESWMLKHDRVYNNIEEKIHRFEIFKD 74

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG-------YNKPYNEPRWPSVQYLG 141
           N+ YID  N +N S+ L  N+F DL+++EF   Y+G         +  N+  +P    + 
Sbjct: 75  NLMYIDETNKKNNSYWLGLNEFVDLTHDEFKEKYVGSIGEDFVTIEQSNDEEFPYKHVVD 134

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
            P S+DWR +GAVTPVK    CGSCWAFS VA VEGINK+ TGKL+SLSEQEL+DCD  S
Sbjct: 135 YPESIDWRDKGAVTPVKPN-PCGSCWAFSTVATVEGINKIVTGKLISLSEQELLDCDRRS 193

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
              GC GGY   + +++    GV TE +YPY  K  +C+  + K   V ITGY+ +PA  
Sbjct: 194 --HGCKGGYQTTSLQYVVD-NGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPAND 250

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                 AFQLY  G+F+  CG +L+H VT +GY    G+ Y L+
Sbjct: 251 EISLIQAIANQPVSVLLESKGRAFQLYKGGIFNGPCGTKLDHAVTAIGY----GKTYILI 306

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSWG +WGE GY+++ R S  S  G CG+   + +P K
Sbjct: 307 KNSWGPNWGEKGYLKIKRASGKSE-GTCGVYKSSYFPTK 344


>gi|296082368|emb|CBI21373.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  233 bits (594), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 116/219 (52%), Positives = 139/219 (63%), Gaps = 23/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP SVDWR+ GAV PVKDQ  CGSCWAFS VAAVEGIN++ TG+L+SLSEQELVDCD   
Sbjct: 6   LPESVDWRETGAVNPVKDQRSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDTEY 65

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
           +  GCNGG M+ AF+FI K GG+ TE DYPY G +  C         V+I GYE +P   
Sbjct: 66  D-MGCNGGLMDYAFDFIIKNGGLDTEKDYPYTGFDGECNLSGKSSKVVSIDGYEDVPPFD 124

Query: 259 -------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                 A QLY  G+F   CG  L+HG+  VGYG ++G  YW+V
Sbjct: 125 EKALQKAVAHQPVSVAVEAGGRALQLYVSGIFTGECGTALDHGIVAVGYGTENGTDYWIV 184

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           +NSWG+SWGE GYIRM RN   +  G CGI M+ASYP+K
Sbjct: 185 RNSWGSSWGENGYIRMERNMADAFSGKCGIAMEASYPIK 223


>gi|57118005|gb|AAW34134.1| cysteine protease gp2a [Zingiber officinale]
          Length = 381

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 172/294 (58%), Gaps = 43/294 (14%)

Query: 82  RFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV 137
           R  ++  N+Q++D  N+       +F L  N+FADL+NEE+ + +L   + ++  R  + 
Sbjct: 73  RLEVFKENLQFVDEHNAAADRGEHTFLLGMNRFADLTNEEYRTRFL---RDFSRLRRSAS 129

Query: 138 QYLG----------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             +           LP S+DWR+ GAV PVK+QG CGSCWAFS VAAVEGIN++ TG L+
Sbjct: 130 GKISSRYRLREGDDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLI 189

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDC   + N GC GG+M  AF+FI   GG+ +E+ YPYRG+N  C +      
Sbjct: 190 SLSEQQLVDC--TTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQNGICNS-TVNAP 246

Query: 248 AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTV 285
            V+I  YE +P                      A   FQLY  G+F   C    NH +TV
Sbjct: 247 VVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTV 306

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG ++ + +W+VKNSWG +WGE+GYIR  RN  + N G CGI   ASYPVK+
Sbjct: 307 VGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPN-GKCGITRFASYPVKK 359


>gi|27728675|gb|AAO18731.1| cysteine protease [Gossypium hirsutum]
          Length = 389

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 181/315 (57%), Gaps = 38/315 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK----LTDNKFADLSN 115
           E F+ W +++ + Y   +E ++RF  +  N++YI   N++  + K    +  NKFAD+SN
Sbjct: 47  EIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKWEHHVGLNKFADMSN 106

Query: 116 EEFISTYLG-YNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           EEF   YL    KP N+    S      VQ    P+S+DWR  G VT VKDQG CGSCWA
Sbjct: 107 EEFRKAYLSKVKKPINKGITLSRNMRRKVQSCDAPSSLDWRNYGVVTAVKDQGSCGSCWA 166

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS+  A+EGIN L TG L+SLSEQELV+CD  + N GC GGYM+ AFE++   GG+ +E 
Sbjct: 167 FSSTGAMEGINALVTGDLISLSEQELVECD--TSNYGCEGGYMDYAFEWVINNGGIDSES 224

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQLYS 267
           DYPY G +  C T K +   V+I GY+ +                      +   FQLY+
Sbjct: 225 DYPYTGVDGTCNTTKEETKVVSIDGYQDVEQSDSALLCAVAQQPVSVGIDGSAIDFQLYT 284

Query: 268 HGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            G++D  C      ++H V +VGYG +  E+YW+VKNSWGTSWG  GY  + R++     
Sbjct: 285 GGIYDGSCSDDPDDIDHAVLIVGYGSEDSEEYWIVKNSWGTSWGIDGYFYLKRDTDLP-Y 343

Query: 325 GICGILMQASYPVKR 339
           G+C +   ASYP K+
Sbjct: 344 GVCAVNAMASYPTKQ 358


>gi|224116884|ref|XP_002317418.1| predicted protein [Populus trichocarpa]
 gi|222860483|gb|EEE98030.1| predicted protein [Populus trichocarpa]
          Length = 503

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 180/319 (56%), Gaps = 38/319 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI---DYINSQNLSFKLTDNKFAD 112
           +S+ E F+ W  ++ + Y    E ++R+  +  N++YI       +  L   +  NKFAD
Sbjct: 44  ESIIEIFQQWRDRHQKVYEHAAESEKRYRNFKRNLKYIIEKAGKKTAALGHSVGLNKFAD 103

Query: 113 LSNEEFISTYLG-YNKPYNEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           LSNEEF   YL    KP N  R  +       +Q    P+S+DWRK+G VT VKDQG CG
Sbjct: 104 LSNEEFKELYLSKVKKPINIKRSTARDWRQRNLQTCDAPSSLDWRKKGVVTAVKDQGDCG 163

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FS   A+EGIN + TG L+SLSEQELVDCD  + N GC GGYM+ AFE++   GG+
Sbjct: 164 SCWSFSTTGAIEGINAIVTGDLISLSEQELVDCD--TTNYGCEGGYMDYAFEWVINNGGI 221

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAF 263
            TE +YPY G +  C T K +   V+I GY  +                      +   F
Sbjct: 222 DTEANYPYTGVDGTCNTTKEEIKVVSIDGYTDVDETDSALLCATVQQPISVGMDGSALDF 281

Query: 264 QLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           QLY+ G++D  C    + ++H V +VGYG ++GE YW+VKNSWGT WG  GY  + RN+ 
Sbjct: 282 QLYTGGIYDGDCSDDPNDIDHAVLIVGYGSENGEDYWIVKNSWGTEWGMEGYFYIKRNTD 341

Query: 321 SSNIGICGILMQASYPVKR 339
               G+C I  +ASYP K 
Sbjct: 342 LP-YGVCAINAEASYPTKE 359


>gi|224079085|ref|XP_002305743.1| predicted protein [Populus trichocarpa]
 gi|222848707|gb|EEE86254.1| predicted protein [Populus trichocarpa]
          Length = 494

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 181/318 (56%), Gaps = 37/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADL 113
           +S+ E F+ W  ++ + Y   +E ++RFG +  N++YI     +   L  ++  NKFADL
Sbjct: 37  ESIIEIFQQWRDRHQKAYKHAEEAEKRFGNFKRNLKYIIEKTGKETTLRHRVGLNKFADL 96

Query: 114 SNEEFISTYLG-YNKPYNEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           SNEEF   YL    KP N+ R  +       +Q    P+S+DWRK+G VT VKDQG CGS
Sbjct: 97  SNEEFKQLYLSKVKKPINKTRIDAEDRSRRNLQSCDAPSSLDWRKKGVVTAVKDQGDCGS 156

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FS   A+EGIN + T  L+SLSEQELVDCD  + N GC GGYM+ AFE++   GG+ 
Sbjct: 157 CWSFSTTGAIEGINAIVTSDLISLSEQELVDCD--TTNYGCEGGYMDYAFEWVINNGGID 214

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQ 264
           TE +YPY G +  C T K +   V+I GY+ +                      +   FQ
Sbjct: 215 TEANYPYTGVDGTCNTAKEEIKVVSIDGYKDVDETDSALLCAAAQQPISVGIDGSAIDFQ 274

Query: 265 LYSHGVF---DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           LY+ G++          ++H V +VGYG ++GE YW+VKNSWGTSWG  GY  + RN+  
Sbjct: 275 LYTGGIYDGDCSDDPDDIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIEGYFYIKRNTDL 334

Query: 322 SNIGICGILMQASYPVKR 339
              G+C I   ASYP K 
Sbjct: 335 P-YGVCAINAMASYPTKE 351


>gi|341850671|gb|AEK97329.1| chromoplast senescence-associated protein 12 [Brassica rapa var.
           parachinensis]
          Length = 260

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/261 (45%), Positives = 159/261 (60%), Gaps = 36/261 (13%)

Query: 109 KFADLSNEEFISTYLGYN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVK 158
           +FA+++N+EF S Y GY                 R+ +V    LP +VDWRK+GAVTP+K
Sbjct: 1   QFAEITNDEFRSMYTGYKGDSVLSSQSQTKSTSFRYQNVSSGALPIAVDWRKKGAVTPIK 60

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QG CG CWAFSAVAA+EG  ++K GKL+SLSEQ+LVDCD N  + GC+GG ++ AFE I
Sbjct: 61  NQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCSGGLIDTAFEHI 118

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------ 260
              GG+TTE +YPY+G++  C+   T   A +ITGYE +P                    
Sbjct: 119 MATGGLTTESNYPYKGEDATCKIKSTXPSAASITGYEDVPVNDENALMKAVAHQPVSVGI 178

Query: 261 ----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRM 315
               + FQ YS GVF   C   L+H VT VGY +   G KYW++KNSWGT WGE GY+R+
Sbjct: 179 EGGGFDFQFYSSGVFTGECTTYLDHAVTAVGYSQSSAGSKYWIIKNSWGTKWGEGGYMRI 238

Query: 316 ARNSPSSNIGICGILMQASYP 336
            ++      G+CG+ M+ASYP
Sbjct: 239 KKDIKDKE-GLCGLAMKASYP 258


>gi|224116880|ref|XP_002317417.1| predicted protein [Populus trichocarpa]
 gi|118488173|gb|ABK95906.1| unknown [Populus trichocarpa]
 gi|222860482|gb|EEE98029.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 180/314 (57%), Gaps = 33/314 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN---LSFKLTDNKFAD 112
           + + E F+ W +++ + Y   +E +RR G +  N++YI   N +    L  K+  NKFAD
Sbjct: 44  EGITEVFKLWKEKHQKVYKHAEEAERRIGNFKRNLKYIIEKNGKRKSGLEHKVGLNKFAD 103

Query: 113 LSNEEFISTYLG-YNKPYN---EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           LSNEEF   YL    KP     + +   +Q    P+S+DWR +G VT VKDQG CGSCW+
Sbjct: 104 LSNEEFREMYLSKVKKPITIEEKRKHRHLQTCDAPSSLDWRNKGVVTAVKDQGDCGSCWS 163

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   A+E IN + TG L+SLSEQELVDCD  + N GC GG M+ AF+++   GG+ TE 
Sbjct: 164 FSTTGAIEAINAIVTGDLISLSEQELVDCDT-TNNYGCEGGDMDSAFQWVIGNGGIDTEA 222

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAI-PARYA--------------------FQLYS 267
           DYPY G +  C T K +   V+I GY  + P+  A                    FQLY+
Sbjct: 223 DYPYTGVDGTCNTAKEEKKVVSIEGYVDVDPSDSALLCATVQQPISVGMDGSALDFQLYT 282

Query: 268 HGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            G++D  C    + ++H + +VGYG ++ E YW+VKNSWGT WG  GY  + RN+ S   
Sbjct: 283 GGIYDGDCSGDPNDIDHAILIVGYGSENDEDYWIVKNSWGTEWGMEGYFYIRRNT-SKPY 341

Query: 325 GICGILMQASYPVK 338
           G+C I   ASYP K
Sbjct: 342 GVCAINADASYPTK 355


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 191/331 (57%), Gaps = 46/331 (13%)

Query: 40  IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-----D 94
           IP+   +EG         +E +FE +   + R Y S +    R  I+ +N+Q+I     D
Sbjct: 19  IPSMLLTEG--------ELEAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNID 70

Query: 95  YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ----YLGLPASVDWRK 150
           Y N  + +F ++ N F DLSNEEF +T+ GY +        SV        LPA+VDW  
Sbjct: 71  YFNGDS-TFSVSVNNFTDLSNEEFRATFNGYRRLAAVSLADSVHADNDVEALPATVDWTT 129

Query: 151 EGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGY 210
           +G VTP+K+Q QCGSCWAFSAVA++EG + LKTGKLVSLSEQ LVDC     + GC+GG+
Sbjct: 130 KGVVTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGW 189

Query: 211 MEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK-----TKHHAVTI-TGYEAI------- 257
           M+ AF+++ +  G+ TE  YPY+  ++ C+  +     T H  V + TG E+        
Sbjct: 190 MDYAFKYVIQNRGIDTEASYPYKAIDESCEFKRNSVGATIHSFVDVKTGDESALQNAVAS 249

Query: 258 ---------PARYAFQLYSHGVFDEY-CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTS 306
                     A+ +FQ YS GV++E  C  + L+HGVT VGYG  +G  YW VKNSWGTS
Sbjct: 250 IGPISVAIDAAQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGTLNGAPYWKVKNSWGTS 309

Query: 307 WGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           WG  GYI M+RN  +     CGI  +ASYPV
Sbjct: 310 WGRKGYIFMSRNKQNQ----CGIATKASYPV 336


>gi|413944252|gb|AFW76901.1| hypothetical protein ZEAMMB73_101481 [Zea mays]
          Length = 232

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 26/229 (11%)

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
           R+ +V    +PA++DWR  GAVTP+KDQGQCG CWAFSAVAA EGI K+ TGKL+SLSEQ
Sbjct: 7   RYENVSVDAIPATIDWRTNGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLISLSEQ 66

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTIT 252
           ELVDCDV  E+QGC GG M+ AF+FI K GG+TTE +YPY   + +C++    + A  I 
Sbjct: 67  ELVDCDVYGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYTAADGKCKSG--SNSAANIK 124

Query: 253 GYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           GYE +P                          FQ YS GV    CG  L+HG+  +GYG+
Sbjct: 125 GYEDVPTNDEAALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGK 184

Query: 291 -DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
              G KYWL+KNSWGT+WGE GY+RM ++  S   G+CG+ ++ SYP +
Sbjct: 185 TSDGTKYWLMKNSWGTTWGENGYLRMEKD-ISDKKGMCGLAIEPSYPTE 232


>gi|18403438|ref|NP_565780.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|2342728|gb|AAB67626.1| cysteine proteinase [Arabidopsis thaliana]
 gi|330253821|gb|AEC08915.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 345

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 181/321 (56%), Gaps = 42/321 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFA 111
           +  QSM ++ E W+ ++SREY  E E   R  ++  N+++I+  N + N S+KL  N+FA
Sbjct: 30  FREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFA 89

Query: 112 DLSNEEFISTYLGYN------------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKD 159
           D +NEEF++ + G              K  +   W     +    S DWR EGAVTPVK 
Sbjct: 90  DWTNEEFLAIHTGLKGLTEVSPSKVVAKTISSQTWNVSDMV--VESKDWRAEGAVTPVKY 147

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QGQCG CWAFSAVAAVEG+ K+  G LVSLSEQ+L+DCD    ++GC+GG M  AF ++ 
Sbjct: 148 QGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSEQQLLDCD-REYDRGCDGGIMSDAFNYVV 206

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY------------------ 261
           +  G+ +E+DY Y+G +  C+++     A  I+G++ +P+                    
Sbjct: 207 QNRGIASENDYSYQGSDGGCRSN--ARPAARISGFQTVPSNNERALLEAVSRQPVSVSMD 264

Query: 262 ----AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMA 316
                F  YS GV+D  CG   NH VT VGYG    G KYWL KNSWG +WGE GYIR+ 
Sbjct: 265 ATGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEKGYIRIR 324

Query: 317 RNSPSSNIGICGILMQASYPV 337
           R+      G+CG+   A YPV
Sbjct: 325 RDVAWPQ-GMCGVAQYAFYPV 344


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/319 (44%), Positives = 184/319 (57%), Gaps = 43/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQN-LSFKLTDNKFADL 113
           ++E++ ++  Q+S+ Y SE E + R  I+  N   +   N   SQ  + FKL  NK+AD+
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNE----------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
            + EF+ST  G+NK  N            R+ S   + LP +VDWR +GAVT VKDQG C
Sbjct: 83  LHHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQGHC 142

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCW+FSA  ++EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG
Sbjct: 143 GSCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKDNGG 202

Query: 224 VTTEDDYPYRGKNDRCQ--------TDK-----------TKHHAVTITGYEAI---PARY 261
           + TE  YPY  ++++C         TDK               AV   G  +I    +  
Sbjct: 203 IDTEKSYPYLAEDEKCHYKAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHE 262

Query: 262 AFQLYSHGVF-DEYCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
            FQLYS GV+ D  C  Q L+HGV VVGYG  D G+ YWLVKNSWG SWG  GYI+MARN
Sbjct: 263 TFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLNGYIKMARN 322

Query: 319 SPSSNIGICGILMQASYPV 337
             +    +CG+  QASYP+
Sbjct: 323 QDN----MCGVASQASYPL 337


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 180/316 (56%), Gaps = 39/316 (12%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFAD 112
           +  Q+ +  F  W++++ R Y S +E+  R+  +  N+ +I   NSQ     L   KFAD
Sbjct: 24  FSSQTYQTSFIGWMRKHDRAY-SHEEFTDRYQAFKENMDFIHKWNSQESDTVLGLTKFAD 82

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLGL-------PASVDWRKEGAVTPVKDQGQCGS 165
           L+NEE+   YLG     N  +  +    GL       P S+DWR++GAV+ VKDQGQCGS
Sbjct: 83  LTNEEYKKHYLGI--KVNVKKNLNAAQKGLKFFKFTGPDSIDWREKGAVSQVKDQGQCGS 140

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FS   AVEG +++K+G +VSLSEQ LVDC     NQGC GG M  AFE+I   GG+ 
Sbjct: 141 CWSFSTTGAVEGAHQIKSGNMVSLSEQNLVDCSGQYGNQGCEGGLMVNAFEYIIDNGGIA 200

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAF 263
           TE  YPY     RC+  K+ + A  I GY+ IP                      +  +F
Sbjct: 201 TESSYPYTAAQGRCKFTKSMNGA-NIIGYKEIPQGEEDSLTAALAKQPVSVAIDASHMSF 259

Query: 264 QLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           QLYS GV+DE  C  + L+HGV  VGYG   G+ Y+++KNSWG +WG+ GYI M+RN+ +
Sbjct: 260 QLYSSGVYDEPACSSEALDHGVLAVGYGTLEGKDYYIIKNSWGPTWGQDGYIFMSRNAQN 319

Query: 322 SNIGICGILMQASYPV 337
                CG+   ASYP+
Sbjct: 320 Q----CGVATMASYPI 331


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/339 (41%), Positives = 194/339 (57%), Gaps = 47/339 (13%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
            LS+FL   L + +       P K DP      +E W   + ++Y ++ E   R  ++  
Sbjct: 3   TLSVFLAICLAVVSAI-----PLK-DPS-----WEAWKSFHGKKYHNQGEDDFRHYVFLQ 51

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGY----NKPYNEPR-WPSVQYLGLP 143
           N++ I   N+++ +FK+  N+F+DL+ +EF+ TY GY     K  N+P  + +     +P
Sbjct: 52  NIKTIAAHNAKS-TFKMAINEFSDLTRKEFVKTYNGYRLSMKKSTNKPSTFMAPLNTNMP 110

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
             VDWRKEG VTP+K+QG+CGSCWAFS   ++EG +  KTGKLVSLSEQ L+DC     N
Sbjct: 111 TEVDWRKEGYVTPIKNQGRCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLIDCSAAEGN 170

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE-------- 255
            GC GG+M+ AFE+I    G+ TE  YPY G++D C+  KT   A+  TGY         
Sbjct: 171 DGCGGGFMDDAFEYIKLNNGIDTEASYPYEGRDDICRYKKTNKGAID-TGYMDIKQYSED 229

Query: 256 --------------AIPARY-AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWL 298
                         AI A + +F +Y  GV+ E  C    L+HGV VVGYG ++GE YWL
Sbjct: 230 DLKAAVATVGPISVAIDASHKSFHMYHTGVYHEPECSQTVLDHGVLVVGYGTENGEDYWL 289

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VKNSWGT WG  GYI+M+RN  ++    CGI   ASYP+
Sbjct: 290 VKNSWGTDWGMNGYIKMSRNRSNN----CGIATNASYPL 324


>gi|357446975|ref|XP_003593763.1| Cysteine proteinase [Medicago truncatula]
 gi|355482811|gb|AES64014.1| Cysteine proteinase [Medicago truncatula]
          Length = 350

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 192/339 (56%), Gaps = 41/339 (12%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
             + LLW    P         +     S+ E  + W+ +Y R Y +  E ++R  I+  N
Sbjct: 7   FCIILLWACAYPT------MSRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKEN 60

Query: 90  VQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGY--NKPYNEPRWPSVQYL-----G 141
           ++YI+ + N  N S+KL  N+++DL++EEFI+++ G+  +   ++ +  SV         
Sbjct: 61  LEYIENFNNVGNKSYKLGLNRYSDLTSEEFIASHTGFKVSDQLSDSKMRSVAIPFNLNDD 120

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P + DWR++G VT VK+Q QCG CWAF+AVAAVEGI K+K G L+SLSEQ+LVDCD   
Sbjct: 121 VPTNFDWREKGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCD--R 178

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTKHHAVTITGYEAIPAR 260
           ++ GC GG    AF+ I K  G+  EDDYPY+  +   CQ  +    A  I GY  +PA 
Sbjct: 179 QSSGCGGGDFVLAFDSIIKSRGIVKEDDYPYKANDVQTCQLGQIP-GAAQINGYFKVPAN 237

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWL 298
                                Y F  Y  GV++  CG +LNH VT++GYG  + G+KYWL
Sbjct: 238 DEQQLLRAVLQQPVSVAISTSYDFHHYMGGVYEGSCGPKLNHAVTIIGYGVSEAGKKYWL 297

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +KNSWG +WGE GY+++ R S ++  G C I + A+YP 
Sbjct: 298 IKNSWGETWGEKGYMKVLRESSATG-GQCSIAVHAAYPT 335


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/307 (43%), Positives = 178/307 (57%), Gaps = 36/307 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFI 119
           E +  W  +Y + Y S  E   R  I+  N  Y++  NS + SF+L  N+FADL+ EEF 
Sbjct: 27  EEWRLWKGKYGKTYRSIYEDNMRQKIWLQNRDYVNEHNSMDSSFQLEVNEFADLTAEEFS 86

Query: 120 STYLGYNKPYNEPRWPSV---QYLG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           S Y GY K  N     +    +Y G  +P SVDWR +G VTPVK+Q QCGSCWAFS   +
Sbjct: 87  SIYNGYGKGRNRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGS 146

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EG +  KTGKLVSLSEQ LVDCD   ++ GC GG M  AF++I +  G+ TE+ YPY+ 
Sbjct: 147 LEGAHAKKTGKLVSLSEQNLVDCD--KKDHGCQGGLMTTAFKYIEENKGIDTEESYPYKA 204

Query: 235 KNDRCQTDKT-------KHHAVTITGYEAIPARYA---------------FQLYSHGVFD 272
           KN RC+  K        +H ++  T  EA+    A               FQLY  G++D
Sbjct: 205 KNGRCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASHSSFQLYKSGIYD 264

Query: 273 -EYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
            + C   +L+HGV VVGYG++ GE+YWLVKNSWG +WG  GY ++A     S   +CGI 
Sbjct: 265 PKICSSRKLDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGYFKIA-----SKKNLCGIC 319

Query: 331 MQASYPV 337
             A YPV
Sbjct: 320 TSACYPV 326


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 193/331 (58%), Gaps = 46/331 (13%)

Query: 40  IPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-----D 94
           IP+   +EG         +E +FE +   + R Y S +    R  I+ +N+Q+I     D
Sbjct: 19  IPSMLLTEG--------ELEAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNID 70

Query: 95  YINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQ----YLGLPASVDWRK 150
           Y N  + +F ++ N F DLSNEEF +T+ GY +        SV        LPA+VDW  
Sbjct: 71  YFNGDS-TFSVSVNNFTDLSNEEFRATFNGYRRLAAVSLADSVHADNDVEALPATVDWTT 129

Query: 151 EGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGY 210
           +G VTP+K+Q QCGSCWAFSAVA++EG + LKTGKLVSLSEQ LVDC     + GC+GG+
Sbjct: 130 KGVVTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGW 189

Query: 211 MEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK-----TKHHAVTI-TGYE--------- 255
           M+ AF+++ +  G+ TE  YPY+  ++ C+  +     T H  V + TG E         
Sbjct: 190 MDYAFKYVIQNRGIDTEASYPYKAIDESCEFKRNSIGATIHSFVDVKTGDESALQNAVAS 249

Query: 256 ------AIPA-RYAFQLYSHGVFDEY-CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTS 306
                 AI A + +FQ YS GV++E  C  + L+HGVT VGYG  +G  YW VKNSWGTS
Sbjct: 250 IGPISVAIDASQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGTLNGVPYWKVKNSWGTS 309

Query: 307 WGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           WG+ GYI M+RN  +     CGI  +ASYPV
Sbjct: 310 WGQKGYIFMSRNKQNQ----CGIATKASYPV 336


>gi|18396939|ref|NP_564320.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|9502427|gb|AAF88126.1|AC021043_19 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|67633400|gb|AAY78625.1| peptidase C1A papain family protein [Arabidopsis thaliana]
 gi|332192919|gb|AEE31040.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 346

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 182/320 (56%), Gaps = 39/320 (12%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFA 111
           Y P S+ +  + W+ Q+SR Y  E E Q R  + + N+++I+  N+  N S+KL  N+F 
Sbjct: 30  YKPSSIVDYHQQWMIQFSRVYDDEFEKQLRLQVLTENLKFIESFNNMGNQSYKLGVNEFT 89

Query: 112 DLSNEEFISTYLGY-----NKPY-----NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           D + EEF++TY G        P+      +P W       L  + DWR EGAVTPVK QG
Sbjct: 90  DWTKEEFLATYTGLRGVNVTSPFEVVNETKPAWNWTVSDVLGTNKDWRNEGAVTPVKSQG 149

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           +CG CWAFSA+AAVEG+ K+  G L+SLSEQ+L+DC    +N GC GG    AF +I K 
Sbjct: 150 ECGGCWAFSAIAAVEGLTKIARGNLISLSEQQLLDC-TREQNNGCKGGTFVNAFNYIIKH 208

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------A 259
            G+++E++YPY+ K   C+++     A+ I G+E +P                      +
Sbjct: 209 RGISSENEYPYQVKEGPCRSN--ARPAILIRGFENVPSNNERALLEAVSRQPVAVAIDAS 266

Query: 260 RYAFQLYSHGVFD-EYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMAR 317
              F  YS GV++   CG  +NH VT+VGYG    G KYWL KNSWG +WGE GYIR+ R
Sbjct: 267 EAGFVHYSGGVYNARNCGTSVNHAVTLVGYGTSPEGMKYWLAKNSWGKTWGENGYIRIRR 326

Query: 318 NSPSSNIGICGILMQASYPV 337
           +      G+CG+   ASYPV
Sbjct: 327 DVEWPQ-GMCGVAQYASYPV 345


>gi|57118007|gb|AAW34135.1| cysteine protease gp2b [Zingiber officinale]
          Length = 379

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 173/294 (58%), Gaps = 43/294 (14%)

Query: 82  RFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV 137
           R  ++  N+Q++D  N+       +F+L  N+FADL+NEE+ + +L   + ++  R  + 
Sbjct: 71  RLEVFKENLQFVDKHNAAADRGEHTFRLGMNRFADLTNEEYRTRFL---RDFSRLRRSAS 127

Query: 138 QYLG----------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             +           LP S+DWR++GAV PVK+QG CGSCWAFS VAAVEGIN++ TG L+
Sbjct: 128 GKISSRYRLREGDDLPDSIDWREKGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLI 187

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ+LVDC   + N GC GG+M  AF+FI   GG+ +E+ YPYRG+N  C +      
Sbjct: 188 SLSEQQLVDC--TTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQNGICNS-TVNAP 244

Query: 248 AVTITGYEAIP----------------------ARYAFQLYSHGVFDEYCGHQLNHGVTV 285
            V+I  YE +P                      A   FQLY  G+F   C    NH +TV
Sbjct: 245 VVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTV 304

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VGYG ++ + Y  VKNSWG +WGE+GYIR+ RN  + N G CGI   ASYPVK+
Sbjct: 305 VGYGTENDKDYRTVKNSWGKNWGESGYIRVERNIGNPN-GKCGITRFASYPVKK 357


>gi|356515062|ref|XP_003526220.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 337

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 179/308 (58%), Gaps = 37/308 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFIST 121
           E W+ Q+ + Y    E +R   I+ +N+++I+  +   + SF L+ N+FADL +EEF + 
Sbjct: 33  EKWMAQHGKVYKDAAEKERCLQIFENNMEFIESFDVCGDKSFNLSTNQFADLHDEEFKAL 92

Query: 122 YL-GYNKPYNEPRWPSVQYL-------GLPASVDWRKEGAVTPVKDQGQCGSCWAFS-AV 172
              G+ K ++   W + + L        +PAS+DWRK G VTP+KDQG+C SCWAFS  V
Sbjct: 93  LTNGHKKEHS--LWTTTETLFRYDNVTKIPASMDWRKRGVVTPIKDQGKCLSCWAFSLCV 150

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
           A +EG++++ T +LV LSEQELVD  V  E++GC G Y+E AF+FITK G + +E  YPY
Sbjct: 151 ATIEGLHQIITSELVPLSEQELVDF-VKGESEGCYGDYVEDAFKFITKKGRIESETHYPY 209

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           +G N+ C+  K  H    I GY+ +P++                       AFQ YS G+
Sbjct: 210 KGVNNTCKVKKETHGVAQIKGYKKVPSKSENALLKAVANQLVSVSVEARDSAFQFYSSGI 269

Query: 271 FDEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F   CG   +H V +  YGE   G KYWL KNSWGT WGE GYIR+  + P+   G+CGI
Sbjct: 270 FTGKCGTDTDHRVALASYGESGDGTKYWLAKNSWGTEWGEKGYIRIKXDIPAKE-GLCGI 328

Query: 330 LMQASYPV 337
                YP+
Sbjct: 329 AKYPYYPI 336


>gi|81542|pir||S02728 actinidain (EC 3.4.22.14) precursor (clone pAC.1) - kiwi fruit
           (fragment)
 gi|15957|emb|CAA31435.1| actinidin precursor [Actinidia chinensis]
 gi|166319|gb|AAA32630.1| actinidin precursor [Actinidia deliciosa]
 gi|226542|prf||1601514A actinidin
          Length = 302

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 125/280 (44%), Positives = 162/280 (57%), Gaps = 37/280 (13%)

Query: 90  VQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYN--------EPRWPSVQYL 140
           +++ID  N+  N S+K+  N+FADL+ EEF STYLG+    N        EPR   V   
Sbjct: 1   LRFIDEHNADTNRSYKVGLNQFADLTGEEFRSTYLGFTGGSNKTKVSNRYEPRVSQV--- 57

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+ C   
Sbjct: 58  -LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIGCGGT 116

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-- 258
              +GCNGGY+   F+FI   GG+ T ++YPY  ++  C  D      VTI  Y  +P  
Sbjct: 117 QNTRGCNGGYITDGFQFIINNGGINTGENYPYTAQDGECNLDLQNEKYVTIDTYGNVPYN 176

Query: 259 --------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                               A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+
Sbjct: 177 NEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWI 236

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           V+NSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 237 VENSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 274


>gi|22661|emb|CAA49504.1| papaya proteinase omega [Carica papaya]
          Length = 367

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 199/342 (58%), Gaps = 40/342 (11%)

Query: 30  LSLFLLWVLGIPAGAWS-EGYPQKYDPQSMEER----FENWLKQYSREYGSEDEWQRRFG 84
           +++ L   + +  G +S  GY Q  D  +  ER    F +W+  +++ Y + DE   RF 
Sbjct: 13  VAICLFVHMSVSFGDFSIVGYSQ--DDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFE 70

Query: 85  IYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG------YNKPYNEPRWPSVQ 138
           I+  N+ YID  N +N S++L  N+FADLSN+EF   Y+G        + Y+E  + +  
Sbjct: 71  IFKDNLNYIDETNKKNNSYRLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDE-EFINED 129

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
            + LP +VDWRK+GAVTPV+ QG CGSCWAFSAVA VEGINK++TGKLV LSEQELVDC+
Sbjct: 130 IVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCE 189

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG----- 253
             S   GC GGY   A E++ K  G+     YPY+ K   C+  +     V  +G     
Sbjct: 190 RRS--HGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQ 246

Query: 254 -------YEAIPAR----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKY 296
                    AI  +            FQLY  G+F+  CG +++H VT VGYG+  G+ Y
Sbjct: 247 PNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGY 306

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            L+KNSWGT+WGE GYIR+ R +P ++ G+CG+   + YP+K
Sbjct: 307 ILIKNSWGTAWGEKGYIRIKR-APGNSPGVCGLYKSSYYPIK 347


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/310 (43%), Positives = 180/310 (58%), Gaps = 37/310 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSNEE 117
           E +E+W K++ + Y S+ E   R  I+ +N +Y+D  N+  +   F +  N+FADL + E
Sbjct: 20  EEWESWKKEHGKVYNSDREELTRHIIWQANRKYVDEHNAHAEKFGFTVGMNQFADLESSE 79

Query: 118 FISTYLGYN-KPY---NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           F   Y GYN KP     + +  S +   LP SVDWR +G VT +K+QGQCGSCWAFSAVA
Sbjct: 80  FGRLYNGYNNKPSMKKAQSKVFSTKVGDLPTSVDWRTKGFVTAIKNQGQCGSCWAFSAVA 139

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
            +EG +   TG LVSLSEQ LVDC     NQGCNGG M+ AF+++ K GG+ TE  YPY+
Sbjct: 140 GLEGQHFNATGTLVSLSEQNLVDCSTAEGNQGCNGGLMDNAFQYVIKNGGIDTEASYPYK 199

Query: 234 GKNDRCQTDKTKHHAVTITGYE-----------------------AIPARY-AFQLYSHG 269
             + +C+ +   +   T +G+                        AI A + +FQLY  G
Sbjct: 200 AVDQKCKFN-AANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHTSFQLYKSG 258

Query: 270 VFDEYCGHQ--LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V+ E    Q  L+HGVT VGY    G  YW+VKNSWGT+WG+AGYI M+RN  +     C
Sbjct: 259 VYSESACSQTSLDHGVTAVGYDSSSGVAYWIVKNSWGTTWGQAGYIWMSRNKNNQ----C 314

Query: 328 GILMQASYPV 337
           GI   ASYP+
Sbjct: 315 GIATAASYPI 324


>gi|194719810|emb|CAR31335.1| pro-asclepain f [Gomphocarpus fruticosus subsp. fruticosus]
          Length = 340

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 180/314 (57%), Gaps = 45/314 (14%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEE 117
           +E WL ++ + Y S  E  +RF I+  N++YID  N  N    ++F L  N+FADL+ +E
Sbjct: 34  YEEWLVKHQKLYSSLGEKIKRFEIFKDNLRYIDQQNHYNKVNHMNFTLGLNQFADLTLDE 93

Query: 118 FISTYLGYNKPYNE-----PRWPSVQ-------YLGLPASVDWRKEGAVTPVKDQGQCGS 165
           F S YLG +  Y +     P    V+        + LP SVDWR++G V P+++QG+CGS
Sbjct: 94  FSSIYLGTSVDYEQIISSNPNHDDVEEDILKEDVVELPDSVDWREKGVVFPIRNQGKCGS 153

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW FSAVA++E +N +K G +++LSEQEL+DC+  S  QGC GG+   AF ++ K  G+T
Sbjct: 154 CWTFSAVASIETLNGIKKGHMIALSEQELLDCETIS--QGCKGGHYNNAFAYVAK-NGIT 210

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA----------------------F 263
           +E+ YPY  +  +C     K   V I+GY+ +P                          F
Sbjct: 211 SEEKYPYIFRQGQCY---QKEKVVKISGYKRVPRNNGGQLQSAVAQQVVSVAVKCESKDF 267

Query: 264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Q Y  G+F   CG  L+H V +VGYG   G  YW+++NSWGT+WGE GY+R+ +NS    
Sbjct: 268 QFYDRGIFSGACGPILDHAVNIVGYGSKGGANYWIMRNSWGTNWGENGYMRIQKNSKHYE 327

Query: 324 IGICGILMQASYPV 337
            G CGI MQ SYPV
Sbjct: 328 -GHCGIAMQPSYPV 340


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/305 (45%), Positives = 184/305 (60%), Gaps = 39/305 (12%)

Query: 67  KQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTY 122
           KQ+ R Y   +E + RF I+  N+QYI+  N +      S+ L  N+FAD+ NEEF   Y
Sbjct: 47  KQHGRLYEKHEEEEERFEIFKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEF-RMY 105

Query: 123 LGYNKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
            G  + YN  R          +YL  P  VDWRK+G VT VK+QGQCGSCW+FS   ++E
Sbjct: 106 NGLRRDYNYSREVQCSNHLTPEYLVAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGSLE 165

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G +  K+GKLVSLSEQ+LVDC     N+GCNGG M++AFE+I   GG+ TE++YPY  + 
Sbjct: 166 GQHFHKSGKLVSLSEQQLVDCSGKFGNEGCNGGLMDQAFEYIITNGGIETEEEYPYDARQ 225

Query: 237 DRCQTDKTKHHAVTI------TGYE---------------AIPARY-AFQLYSHGVFDE- 273
           +RC   K++  A         +G E               AI A + +FQLYS GV+DE 
Sbjct: 226 ERCHFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQLYSGGVYDEP 285

Query: 274 YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
            C   +L+HGV VVGYG D G+ YWLVKNSWGT+WG  GY++M+RN  +     CG+  Q
Sbjct: 286 KCSSTELDHGVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSRNQDNQ----CGVATQ 341

Query: 333 ASYPV 337
           ASYP+
Sbjct: 342 ASYPL 346


>gi|157093355|gb|ABV22332.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 172/314 (54%), Gaps = 37/314 (11%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           P      F N+  +Y + Y   +E   RFGI+ +NV  I   N++NL+F L  N+F DL+
Sbjct: 20  PPDYMMMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTFALGVNEFTDLT 79

Query: 115 NEEFISTYLGYNKPYNE----PRWPSVQYLGLP--ASVDWRKEGAVTPVKDQGQCGSCWA 168
            EE  ++Y G  KP +     PR  + +Y G P  +SVDW  +G VTPVK+QGQCGSCW+
Sbjct: 80  QEELAASYTGL-KPASLWSGLPRLSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWS 138

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   A+EG   L TG LVSLSEQ+ VDCD  + + GCNGG+M+ AF F  K   + TE 
Sbjct: 139 FSTTGALEGAWALSTGNLVSLSEQQFVDCD--TTDSGCNGGWMDNAFSFAKK-NSICTEG 195

Query: 229 DYPYRGKNDRCQ----------------TD-KTKHHAVTITGYEAIPA-------RYAFQ 264
            YPY   +  C                 TD  T      ++     P        +Y+FQ
Sbjct: 196 SYPYTATDGTCNLSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEADQYSFQ 255

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LYS GV    CG +L+HGV  VGYG + G  YW VKNSWG+SWGE GY+R+ R       
Sbjct: 256 LYSSGVLTASCGTRLDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRG--KGGA 313

Query: 325 GICGILM-QASYPV 337
           G CG+L    SYPV
Sbjct: 314 GECGLLAGPPSYPV 327


>gi|32396018|gb|AAP41846.1| cysteine protease [Anthurium andraeanum]
          Length = 502

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/323 (41%), Positives = 180/323 (55%), Gaps = 47/323 (14%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTD-----NKFADL 113
           +E FE W++++ + Y    E  RR+  + SN+ ++   N++      +      N FADL
Sbjct: 48  QELFERWMEKHRKVYAHPGEKARRYANFLSNLAFVRKRNAEGRRAPSSGQGVGMNVFADL 107

Query: 114 SNEEFISTY------------LGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
           SNEEF   Y             G  +   E R   V     PAS+DWRK GAVT VK+QG
Sbjct: 108 SNEEFREVYSSRVLRKKAAEGRGARRRAGEGR--VVAGCDAPASLDWRKRGAVTAVKNQG 165

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCWAFS+  A+EGIN + TG+L+SLSEQELVDCD  + N+GC+GGYM+ AFE++   
Sbjct: 166 DCGSCWAFSSTGAMEGINAITTGELISLSEQELVDCD--TTNEGCDGGYMDYAFEWVINN 223

Query: 222 GGVTTEDDYPYRGKNDR-CQTDKTKHHAVTITGYEAIPARYA------------------ 262
           GG+ +E +YPY G+ D  C T K +   V+I GYE +    +                  
Sbjct: 224 GGIDSEANYPYTGQADSVCNTTKEEIKVVSIDGYEDVATSESALLCAAVQQPVSVGIDGS 283

Query: 263 ---FQLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
              FQLY+ G++D  C      ++H V VVGYG+  G  YW+VKNSWGT WG  GYI + 
Sbjct: 284 SLDFQLYAGGIYDGDCSGNPDDIDHAVLVVGYGQQGGTDYWIVKNSWGTDWGMQGYIYIR 343

Query: 317 RNSPSSNIGICGILMQASYPVKR 339
           RN+     G+C I   ASYP K+
Sbjct: 344 RNT-GLPYGVCAIDAMASYPTKQ 365


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 187/319 (58%), Gaps = 44/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDNKFADL 113
           ++E++  +   ++++Y S+ E + R  I+  N   +   N   +Q L SFKL  NK+AD+
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPRW----PSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
            + EF+    G+N+  +  R      SV +L      LP  +DWR +GAVTPVKDQGQCG
Sbjct: 83  LHHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FSA  ++EG +  K+GKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY- 261
            TE  YPY+ ++++C   K K+   T  GY                       AI A + 
Sbjct: 203 DTEQAYPYKAEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQ 261

Query: 262 AFQLYSHGVFDE--YCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQLYS GV+ E      QL+HGV VVGYG ED G  YWLVKNSWG SWG+ GYI+MARN
Sbjct: 262 SFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARN 321

Query: 319 SPSSNIGICGILMQASYPV 337
             ++    CGI  +ASYP+
Sbjct: 322 RDNN----CGIATEASYPL 336


>gi|157093357|gb|ABV22333.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 172/314 (54%), Gaps = 37/314 (11%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLS 114
           P      F N+  +Y + Y   +E   RFGI+ +NV  I   N++NL+F L  N+F DL+
Sbjct: 20  PPDYMMMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTFALGVNEFTDLT 79

Query: 115 NEEFISTYLGYNKPYNE----PRWPSVQYLGLP--ASVDWRKEGAVTPVKDQGQCGSCWA 168
            EEF ++Y G  KP +     PR  + +Y G P  +SVDW  +G VTPVK+QGQCGSCW+
Sbjct: 80  QEEFAASYTGL-KPASLWSGLPRLSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWS 138

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   A+EG   L TG LVSLSEQ+  DCD  + + GCNGG+M+ AF F  K   + TE 
Sbjct: 139 FSTTGALEGAWALSTGNLVSLSEQQFEDCD--TTDSGCNGGWMDNAFSFAKK-NSICTEG 195

Query: 229 DYPYRGKNDRCQ----------------TD-KTKHHAVTITGYEAIPA-------RYAFQ 264
            YPY   +  C                 TD  T      ++     P        +Y+FQ
Sbjct: 196 SYPYTATDGTCNLSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEADQYSFQ 255

Query: 265 LYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           LYS GV    CG +L+HGV  VGYG + G  YW VKNSWG+SWGE GY+R+ R       
Sbjct: 256 LYSSGVLTASCGTRLDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRG--KGGA 313

Query: 325 GICGILM-QASYPV 337
           G CG+L    SYPV
Sbjct: 314 GECGLLAGPPSYPV 327


>gi|297851334|ref|XP_002893548.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339390|gb|EFH69807.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 346

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/316 (42%), Positives = 180/316 (56%), Gaps = 40/316 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           + E  + W+ ++SR Y  E E Q RF ++  N+++I+  N + + ++KL  N+FAD + E
Sbjct: 34  VAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTKE 93

Query: 117 EFISTYLGYNK----PYNE------PRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EFI+T+ G       P +E      P W  +V  +  P   DWR EGAVTPVK QGQCG 
Sbjct: 94  EFIATHTGLKGFNGIPSSEFVDEMIPSWNWNVSDVAGPEIKDWRYEGAVTPVKYQGQCGC 153

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS+VAAVEG+ K+  G LVSLSEQ+L+DCD   +N GCNGG M  AF +I K  G+ 
Sbjct: 154 CWAFSSVAAVEGLTKIVGGNLVSLSEQQLLDCDRERDN-GCNGGIMSDAFSYIIKNRGIA 212

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------AF 263
           +E  YPY+     C+ +     +  I G++ +P+                         F
Sbjct: 213 SEASYPYQETEGTCRYNAKP--SAWIRGFQTVPSNNERALLEAVSRQPVSVSIDADGPGF 270

Query: 264 QLYSHGVFDE-YCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
             YS GV+DE YCG  +NH VT VGYG    G KYWL KNSWG +WGE GYIR+ R+   
Sbjct: 271 MHYSGGVYDEPYCGTDVNHAVTFVGYGTSPEGIKYWLAKNSWGETWGENGYIRIRRDVAW 330

Query: 322 SNIGICGILMQASYPV 337
              G+CG+   A YPV
Sbjct: 331 PQ-GMCGVAQYAFYPV 345


>gi|222632170|gb|EEE64302.1| hypothetical protein OsJ_19139 [Oryza sativa Japonica Group]
          Length = 1105

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/219 (51%), Positives = 142/219 (64%), Gaps = 24/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P +VDWR+ GAVT VKDQG CG+CW+FSA  A+EGINK+KTG L+SLSEQEL+DCD  S
Sbjct: 129 VPDAVDWRQSGAVTKVKDQGSCGACWSFSATGAMEGINKIKTGSLISLSEQELIDCD-RS 187

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N GC GG M+ A++F+ K GG+ TE DYPYR  +  C  +K K   VTI GY+ +PA  
Sbjct: 188 YNSGCGGGLMDYAYKFVVKNGGIDTEADYPYRETDGTCNKNKLKRRVVTIDGYKDVPANN 247

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                                 AFQLYS G+FD  C   L+H + +VGYG + G+ YW+V
Sbjct: 248 EDMLLQAVAQQPVSVGICGSARAFQLYSKGIFDGPCPTSLDHAILIVGYGSEGGKDYWIV 307

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSWG SWG  GY+ M RN+ +SN G+CGI    S+P K
Sbjct: 308 KNSWGESWGMKGYMYMHRNTGNSN-GVCGINQMPSFPTK 345


>gi|255557851|ref|XP_002519955.1| cysteine protease, putative [Ricinus communis]
 gi|223541001|gb|EEF42559.1| cysteine protease, putative [Ricinus communis]
          Length = 321

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 189/347 (54%), Gaps = 54/347 (15%)

Query: 17  IAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE 76
           +A+ +   L  A+L +F  W     A        Q  +  ++ E+ E W+ ++ R Y   
Sbjct: 1   MALSLEKKLAIALLVVFSTWASQAMA-------RQLINEDALVEKHEQWMARHGRTYQDS 53

Query: 77  DEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP 135
           +E +RRF I+ SN++YID  N + N +++L  N FADLS+EE+++TY     P       
Sbjct: 54  EEKERRFQIFKSNLEYIDNFNKASNQTYQLGLNNFADLSHEEYVATYTARKMP------- 106

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               + +P S+DWR  GAVTP+K+Q QCG CWAFSA AAVEGI        VSLS Q+L+
Sbjct: 107 ----VEVPESIDWRDHGAVTPIKNQYQCGCCWAFSAAAAVEGI----VANGVSLSAQQLL 158

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC   S+NQGC GG+M  AF +I +  G+  E DYPY+     C    ++  A  I+G+E
Sbjct: 159 DCV--SDNQGCKGGWMNNAFNYIIQNQGIALETDYPYQQMQQMC---SSRMAAAQISGFE 213

Query: 256 AIPARYA-----------------------FQLYSHGVFDEY-CGHQLNHGVTVVGYG-E 290
            +  +                         F+LY  GVF    CG+  +H VT+VGYG  
Sbjct: 214 DVTPKDEEALMRAVAKQPVSVTIDATSNPNFKLYKEGVFTAAGCGNGHSHAVTLVGYGTS 273

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           + G KYWL KNSWG +WGE+GY+R+ R+      G CGI + ASYP 
Sbjct: 274 EDGTKYWLAKNSWGETWGESGYMRLQRDIGLEG-GPCGIALYASYPT 319


>gi|255078398|ref|XP_002502779.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226518045|gb|ACO64037.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 414

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 182/320 (56%), Gaps = 42/320 (13%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-----DYINSQNLSFKLTDNKFA 111
           S+ + F  W +++ + Y SE+E + R  I++ N +++     +Y N ++  F +  N  A
Sbjct: 63  SLSDLFHEWTQKHGKTYDSEEEKELRLKIFADNHEFVQKHNAEYENGEHTHF-VGLNHLA 121

Query: 112 DLSNEEFISTYLGYNKPYNEPRWP----SVQYLGL--PASVDWRKEGAVTPVKDQGQCGS 165
           DL+ +EF    LGYN      R P    + +Y  +  P  +DW   GAVTPVK+Q QCGS
Sbjct: 122 DLTKDEF-KKMLGYNAALRASRAPVDASTWEYADVTPPEEIDWVASGAVTPVKNQKQCGS 180

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS   AVEG+N +KTGKL+SLSE+EL+ C  N  N GCNGG M+  FE+I    G+ 
Sbjct: 181 CWAFSTTGAVEGVNAIKTGKLISLSEEELISCSTNG-NMGCNGGLMDNGFEWIVNNRGID 239

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAF 263
           TED + Y  K ++C   +  H AV I G++ +P+                        +F
Sbjct: 240 TEDGWEYVAKEEKCGFFRRHHRAVAIDGFKDVPSNDEDSLMKAVSQQPVSVAIEADHQSF 299

Query: 264 QLYSHGVFD-EYCGHQLNHGVTVVGYGED----HGEKYWLVKNSWGTSWGEAGYIRMARN 318
           QLY+ GV+  + CG +L+HGV +VGYG D      + +W +KNSWG +WGE GYIR+A+ 
Sbjct: 300 QLYAGGVYSAKDCGTELDHGVLLVGYGVDPKSTKHKHFWKIKNSWGPAWGEDGYIRIAKG 359

Query: 319 SPSSNIGICGILMQASYPVK 338
             S   G CG+ MQ SYP K
Sbjct: 360 G-SGVEGQCGVAMQPSYPTK 378


>gi|380014284|ref|XP_003691169.1| PREDICTED: cathepsin L-like [Apis florea]
          Length = 345

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/348 (39%), Positives = 189/348 (54%), Gaps = 50/348 (14%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           + LFL+  + I A   +  + +  + + M  + E     + + Y S+ E + R  I+  N
Sbjct: 1   MKLFLILFITIFATVHAVSFFELVNQEWMTFKME-----HKKAYKSDVEERFRMKIFMDN 55

Query: 90  VQYIDYINS----QNLSFKLTDNKFADLSNEEFISTYLGYNKPYN----EPRWP------ 135
              I   NS    + +S+KL  NK+ D+ + EF++   G+NK  N      R P      
Sbjct: 56  KHKIAKHNSNYEMKKVSYKLKMNKYGDMLHHEFVNILNGFNKSINTQLRSERMPIGASFI 115

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               + LP  VDWRKEGAVTPVKDQG CGSCW+FSA  A+EG +  +TG LVSLSEQ L+
Sbjct: 116 EPANVALPKKVDWRKEGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLI 175

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC     N GCNGG M++AF++I    G+ TE  YPY  +ND+C+ +     A+ + GY 
Sbjct: 176 DCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEASYPYEAENDKCRYNPANSGAIDV-GYI 234

Query: 256 AIP-----------------------ARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYG- 289
            IP                       +  +FQ YS GV+   E    +L+HGV V+GYG 
Sbjct: 235 DIPTGNEKLLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSEELDHGVLVIGYGT 294

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            ++GE YWLVKNSWG +WG  GYI+MARN     +  CGI   ASYP+
Sbjct: 295 NENGEDYWLVKNSWGETWGNNGYIKMARNK----LNHCGIASSASYPL 338


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/304 (42%), Positives = 175/304 (57%), Gaps = 33/304 (10%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           E++  QY R+YG   E   R  ++  N Q ++  N +     ++FK+  N+F D++NEEF
Sbjct: 13  EHFKTQYGRKYGDAKEELYRQRVFQQNEQLVEAFNKKFENGEVTFKVAMNQFGDMTNEEF 72

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLP--ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
            +   GY K             G P  A VDWR +GAVTPVKDQGQCGSCWAFSA  ++E
Sbjct: 73  NAVMKGYKKGSRGEPTTVFTAEGRPMAADVDWRTKGAVTPVKDQGQCGSCWAFSATGSLE 132

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G + LK  +LVSLSEQELVDC     N GC GG+M  AF++I   GG+ TE  YPY  ++
Sbjct: 133 GQHFLKNNELVSLSEQELVDCSTEYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAQD 192

Query: 237 DRCQ------------------TDKTKHHAVTITGYEAI---PARYAFQLYSHGV-FDEY 274
             C+                  T++  H AV+  G  ++    + ++FQ YS GV +++ 
Sbjct: 193 RSCRFDANSIGATCTGFVEVQHTEEALHEAVSDIGPISVAIDASHFSFQFYSSGVYYEKK 252

Query: 275 CG-HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV  VGYG +  E YWLVKNSWG+ WG+AGYI+M+RN  ++    CGI  + 
Sbjct: 253 CSPTNLDHGVLAVGYGTESTEDYWLVKNSWGSGWGDAGYIKMSRNRDNN----CGIASEP 308

Query: 334 SYPV 337
           SYP 
Sbjct: 309 SYPT 312


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 187/319 (58%), Gaps = 44/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDNKFADL 113
           ++E++  +   ++++Y S+ E + R  I+  N   +   N   +Q L SFKL  NK+AD+
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPRW----PSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
            + EF+    G+N+  +  R      SV +L      LP  +DWR +GAVTPVKDQGQCG
Sbjct: 83  LHHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FSA  ++EG +  K+GKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY- 261
            TE  YPY+ ++++C   K K+   T  GY                       AI A + 
Sbjct: 203 DTEQAYPYKAEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQ 261

Query: 262 AFQLYSHGVF--DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQLYS GV+   E    QL+HGV VVGYG ED G  YWLVKNSWG SWG+ GYI+MARN
Sbjct: 262 SFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARN 321

Query: 319 SPSSNIGICGILMQASYPV 337
             ++    CGI  +ASYP+
Sbjct: 322 RDNN----CGIATEASYPL 336


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 187/319 (58%), Gaps = 44/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDNKFADL 113
           ++E++  +   ++++Y SE E + R  I+  N   +   N   +Q L SFKL  NK+AD+
Sbjct: 23  VQEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPRW----PSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
            + EF+    G+N+  +  R      SV +L      LP  +DWR +GAVTPVKDQGQCG
Sbjct: 83  LHHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FSA  ++EG +  ++GKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY- 261
            TE  YPY+ ++++C   K K+   T  GY                       AI A + 
Sbjct: 203 DTEQAYPYKAEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQ 261

Query: 262 AFQLYSHGVFDE--YCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQLYS GV+ E      QL+HGV VVGYG ED G  YWLVKNSWG SWG+ GYI+MARN
Sbjct: 262 SFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARN 321

Query: 319 SPSSNIGICGILMQASYPV 337
             ++    CGI  +ASYP+
Sbjct: 322 RNNN----CGIATEASYPL 336


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/314 (40%), Positives = 175/314 (55%), Gaps = 34/314 (10%)

Query: 49  YPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDN 108
           +   +DP  +   F +W++++ + Y +E E+  R+ ++  N  YI+  N QN SF L  N
Sbjct: 19  FAVSHDP--LTGVFADWMQEHQKSYANE-EFVYRWNVWRENYLYIEAHNHQNKSFHLAMN 75

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPS--VQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           KF DL+N EF   + G +   ++ +  S      GLPA  DWR++GAVT VK+QGQCGSC
Sbjct: 76  KFGDLTNAEFNKLFKGLSITADQAKQESDIAPAPGLPADFDWRQKGAVTHVKNQGQCGSC 135

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FS   + EG N LK G+L SLSEQ LVDC  +  N GCNGG M+ AFE+I +  G+ T
Sbjct: 136 WSFSTTGSTEGANFLKHGRLTSLSEQNLVDCSTSYGNHGCNGGLMDYAFEYIIRNKGIDT 195

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           E+ YPY      C+ +K +H    +  Y  +P                      +  +FQ
Sbjct: 196 EESYPYHASQGTCRYNK-QHSGGELVSYTNVPSGNEGALLNAVATQPTSVAIDASHSSFQ 254

Query: 265 LYSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
            Y  GV+DE      +L+HGV  VG+G   G+ YWLVKNSWG  WG +GYI M+RN  + 
Sbjct: 255 FYKGGVYDEPACSSSRLDHGVLAVGWGVRDGKDYWLVKNSWGADWGLSGYIEMSRNKHNQ 314

Query: 323 NIGICGILMQASYP 336
               CGI   AS+P
Sbjct: 315 ----CGIATAASHP 324


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 177/314 (56%), Gaps = 38/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +   +E +  Q+++ Y S  E   RF I++ N   +   N++     +S+KL  NKF DL
Sbjct: 23  LRTEWEAFKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDL 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
              EF     GY    N+ + P+      +    LP +VDWRK+GAVTPVK+QGQCGSCW
Sbjct: 83  LPHEFAKMVNGYRGKQNKEQRPTFIPPANLNDSSLPTTVDWRKKGAVTPVKNQGQCGSCW 142

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   ++EG +  KTGKLVSLSEQ LVDC  +  NQGCNGG M+  F++I   GG+ TE
Sbjct: 143 AFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSDDFGNQGCNGGLMDNGFQYIKANGGIDTE 202

Query: 228 DDYPYRGKNDRCQTDKTK-------------------HHAVTITG--YEAIPARY-AFQL 265
           + +PY  ++  C+  K                       AV   G    AI A + +FQL
Sbjct: 203 ESHPYTAQDGDCKFKKADVGATDAGFVDIQQGSEDDLKKAVATVGPVSVAIDASHGSFQL 262

Query: 266 YSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE      QL+HGV  VGYG  +G+KYWLVKNSWG  WG+ GYI M+R+  +  
Sbjct: 263 YSQGVYDEPDCSSSQLDHGVLTVGYGVKNGKKYWLVKNSWGGDWGDNGYILMSRDKDNQ- 321

Query: 324 IGICGILMQASYPV 337
              CGI   ASYP+
Sbjct: 322 ---CGIASSASYPL 332


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/343 (38%), Positives = 191/343 (55%), Gaps = 42/343 (12%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQ 80
           MR++L  A++  FL+ V  I A        + +  +  +  F+NW+ ++ + Y + DE+ 
Sbjct: 1   MRIIL--ALVFCFLI-VNCISA-------ARVFSQKQYQTAFQNWMVKHQKSY-TNDEFG 49

Query: 81  RRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRW--PSVQ 138
            R+ I+  N+ ++   N +     L  N  ADL+N+E+   YLG      +P        
Sbjct: 50  SRYTIFQDNMDFVTKWNQKGSDTILGLNSMADLTNQEYQRIYLGTKTTVKKPNLIIGVTD 109

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
               PASVDWR  GAVT VK+QGQCG C++FS   +VEGI+++ + +LVSLSEQ+++DC 
Sbjct: 110 VSKAPASVDWRANGAVTAVKNQGQCGGCYSFSTTGSVEGIHEITSKQLVSLSEQQILDCS 169

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI- 257
            +  N GC+GG M  +FE+I  +GG+ TE  YPY G   +C+ +K    A TITGY+ + 
Sbjct: 170 GSEGNNGCDGGLMTNSFEYIIAVGGLDTEASYPYEGVVGKCKFNKANIGA-TITGYKNVK 228

Query: 258 ---------------------PARYAFQLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGE 294
                                 ++ +FQLYS GV+ E  C   QL+HGV  VGYG   G+
Sbjct: 229 SGSESDLQTAVAAQPVSVAIDASQNSFQLYSSGVYYEPACSSTQLDHGVLAVGYGSQSGQ 288

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YW+VKNSWG  WGE G+I MARN  ++    CGI   ASYP 
Sbjct: 289 DYWIVKNSWGADWGEKGFILMARNKHNN----CGIATMASYPT 327


>gi|356549192|ref|XP_003542981.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 517

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 196/364 (53%), Gaps = 54/364 (14%)

Query: 21  MRMMLRNAVLSLFLLWVLGIPAGAWS---EGYPQKYDPQSME-----------ERFENWL 66
           M   L+  +  LFL+W      G+W+    G P +Y   ++E           E F+ W 
Sbjct: 1   MGCQLKTQLFLLFLVW------GSWTFLCYGLPSEYSILALEIDKFPSEEGVIELFQRWK 54

Query: 67  KQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS---FKLTDNKFADLSNEEFISTYL 123
           ++  + Y S D+ + RF  +  N++YI   NS+ +S     L  N+FAD+SNEEF S + 
Sbjct: 55  EENKKIYRSPDQEKLRFENFKRNLKYIAEKNSKRISPYGQSLGLNRFADMSNEEFKSKFT 114

Query: 124 G-YNKPYNEPRWPSVQYLGL---PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGIN 179
               KP+++    S +       P S+DWRK+G VT VKDQG CG CWAFS+  A+EGIN
Sbjct: 115 SKVKKPFSKRNGLSGKDHSCEDAPYSLDWRKKGVVTAVKDQGYCGCCWAFSSTGAIEGIN 174

Query: 180 KLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC 239
            + +G L+SLSE ELVDCD    N GC+GG+M+ AFE++   GG+ TE +YPY G +  C
Sbjct: 175 AIVSGDLISLSEPELVDCD--RTNDGCDGGHMDYAFEWVMHNGGIDTETNYPYSGADGTC 232

Query: 240 QTDKTKHHAVTITGYEAIP---------------------ARYAFQLYSHGVFDEYCG-- 276
              K +   + I GY  +                      + + FQLY  G++D  C   
Sbjct: 233 NVAKEETKVIGIDGYYNVEQSDRSLLCATVKQPISAGIDGSSWDFQLYIGGIYDGDCSSD 292

Query: 277 -HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
              ++H + VVGYG +  E YW+VKNSWGTSWG  GYI + RN+ +   G+C I   ASY
Sbjct: 293 PDDIDHAILVVGYGSEGDEDYWIVKNSWGTSWGMEGYIYIRRNT-NLKYGVCAINYMASY 351

Query: 336 PVKR 339
           P K 
Sbjct: 352 PTKE 355


>gi|326514800|dbj|BAJ99761.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 291

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 119/220 (54%), Positives = 140/220 (63%), Gaps = 26/220 (11%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +P+SVDWR++GAVT VKDQGQCGSCWAFS +AAVEGIN ++T  L SLSEQ+LVDCD  S
Sbjct: 61  VPSSVDWRQKGAVTAVKDQGQCGSCWAFSTIAAVEGINAIRTKNLTSLSEQQLVDCDTKS 120

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N GCNGG M+ AF++I K GGV  ED YPY+ +      +K     VTI GYE +PA  
Sbjct: 121 -NAGCNGGLMDYAFQYIAKHGGVAAEDAYPYKARQ-ASSCNKKPSAVVTIDGYEDVPAND 178

Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWL 298
                                  FQ YS GVF   CG +L+HGV  VGYG    G KYW+
Sbjct: 179 ETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWI 238

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           VKNSWG  WGE GYIRM R+      G+CGI M+ASYPVK
Sbjct: 239 VKNSWGPEWGEKGYIRMKRDVEDKE-GLCGIAMEASYPVK 277


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/308 (44%), Positives = 173/308 (56%), Gaps = 36/308 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFIS 120
           F  W   ++R+Y S  E   R  IY SN++ I+  N+    S+ L  N+F DL++ EF +
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 121 TYLG--YNKPYNEPRWPSVQYL----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
            YLG  +N       + S  YL     LP SVDWR  G VTPVK+QGQCGSCW+FS   +
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMVSLPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGS 140

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           VEG +  KTG LVSLSEQ LVDC     N+GCNGG M+ AFE+I K GG+ TE  YPY  
Sbjct: 141 VEGQHARKTGTLVSLSEQNLVDCSSQEGNEGCNGGLMDDAFEYIIKNGGIDTEASYPYTA 200

Query: 235 KNDRCQTDKTKHHAVT------ITGYE---------------AIPARYA-FQLYSHGVFD 272
               C+ +     A        ITG E               AI A +  FQ Y  GV++
Sbjct: 201 TTGTCKFNAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQFYFTGVYN 260

Query: 273 E-YCG-HQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           E  C   QL+HGV  VGYG    G+ YWLVKNSWG +WG+AGYI M+RN+ +     CGI
Sbjct: 261 EKKCSTTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRNADNQ----CGI 316

Query: 330 LMQASYPV 337
              ASYP+
Sbjct: 317 ATSASYPL 324


>gi|198427748|ref|XP_002130282.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 340

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 180/316 (56%), Gaps = 45/316 (14%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEE 117
           F+ W   + + Y + +E +++   + +N   I   N Q      S++L  N++ DL++EE
Sbjct: 29  FQTWKNLWKKVYQTVEEEEQKMATWFNNWNKISEHNMQYSLKQKSYRLEMNEYGDLTSEE 88

Query: 118 FISTYLGYNKPYNEPRWPS--VQYLGL---------PASVDWRKEGAVTPVKDQGQCGSC 166
           F S   GY       R  +    YL L         P  VDWRK G VTPVK+QGQCGSC
Sbjct: 89  FSSMMNGYRNDIRLKRKSTGGSTYLNLLSFGSQIQLPTLVDWRKHGLVTPVKNQGQCGSC 148

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           W+FSA  ++EG +K KTGKLVSLSEQ L+DC     N GCNGG M++AF++I   GG+ T
Sbjct: 149 WSFSATGSLEGQHKKKTGKLVSLSEQNLIDCSTPEGNDGCNGGLMDQAFKYIKIQGGIDT 208

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY-AF 263
           E  YPY  K+D C+ + T   A T TG+                       AI A + +F
Sbjct: 209 EAYYPYEAKDDTCRFNITDSGA-TDTGFVDIKSGDEEMLKEAAATVGPISVAIDASHTSF 267

Query: 264 QLYSHGVFDEYC--GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           Q YS+GV+ E       L+HGV VVGYG ++G+ YWLVKNSWG  WGEAGYI+M+RN+ +
Sbjct: 268 QFYSNGVYSETACSSTMLDHGVLVVGYGTENGKDYWLVKNSWGEGWGEAGYIKMSRNADN 327

Query: 322 SNIGICGILMQASYPV 337
                CGI  QASYP+
Sbjct: 328 Q----CGIATQASYPL 339


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/354 (38%), Positives = 189/354 (53%), Gaps = 55/354 (15%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           +R A+++L +  V    A ++SE   ++++   +E R         + Y    E   R  
Sbjct: 1   MRFALITLLIALVAMTQAVSYSELVREEWNTFKLEHR---------KNYADSTEETFRMK 51

Query: 85  IYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN-----------KPY 129
           I++ N  +I   N +     +S+KL  NK+AD+ + EF  T  G+N           + +
Sbjct: 52  IFNENKHHIAKHNQRYATGEVSYKLALNKYADMLHHEFRETMNGFNYTLHKQLRSTDESF 111

Query: 130 NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
               + S +++ LP +VDWR +GAVT VKDQG CGSCWAFS+  A+EG +  K+G LVSL
Sbjct: 112 TGVTFISPEHVKLPTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSL 171

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ LVDC     N GCNGG M+ AF ++   GG+ TE  Y Y G +D C  DK    A 
Sbjct: 172 SEQNLVDCSTKYGNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYEGIDDSCHFDKNSIGA- 230

Query: 250 TITGYEAIP-----------------------ARYAFQLYSHGVFDE--YCGHQLNHGVT 284
           T  G+  IP                       ++ +FQ YS GV+DE       L+HGV 
Sbjct: 231 TDRGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVL 290

Query: 285 VVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VVGYG E  G  YWLVKNSWGT+WG+ G+I+M+RN  +     CGI   +SYP+
Sbjct: 291 VVGYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRNKENQ----CGIASASSYPL 340


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/316 (43%), Positives = 183/316 (57%), Gaps = 38/316 (12%)

Query: 55  PQS-MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNK 109
           P+S ++  ++ +LK + ++YG+E+E +RR  I+  N+ YI+  N      + SF L  N+
Sbjct: 19  PKSELDSEWQLYLKAHGKQYGAEEEARRRV-IWEGNLDYIEKHNLAADRGDYSFWLGMNE 77

Query: 110 FADLSNEEFISTYLGYNKPYNEPR----WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           + D++NEEF ST  GY       R     P      LP +VDWR +G VTP+K+QGQCGS
Sbjct: 78  YGDMTNEEFRSTMNGYKMRNGTSRGSLYLPPSNIGDLPDTVDWRPKGYVTPIKNQGQCGS 137

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FSA  ++EG    KTGKL SLSEQ LVDC     N GC GG M+ AF++I    G+ 
Sbjct: 138 CWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDDAFQYIKDNNGID 197

Query: 226 TEDDYPYRGKNDRCQ--------TD------KTK-----HHAVTITGYEAI---PARYAF 263
           TE  YPY  KN +C+        TD      K+K       AV   G  A+    +  +F
Sbjct: 198 TESSYPYEAKNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPIAVAIDASHMSF 257

Query: 264 QLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           QLY  GV+ E +C   +L+HGV  VGYG + G+ YWLVKNSWG SWG+ GYI M+RN  +
Sbjct: 258 QLYKSGVYHEFFCSETRLDHGVLAVGYGTESGKDYWLVKNSWGESWGQKGYIMMSRNKRN 317

Query: 322 SNIGICGILMQASYPV 337
           +    CGI   ASYP 
Sbjct: 318 N----CGIATSASYPT 329


>gi|357153071|ref|XP_003576329.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 398

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/346 (38%), Positives = 185/346 (53%), Gaps = 63/346 (18%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTD 107
           K++   M  RF+ W+    R Y + +E  RRF +Y SNV+YI+ +N++     L+F+L +
Sbjct: 52  KHNDLLMMGRFQGWMAAQGRSYWTAEETARRFEVYKSNVRYIEAVNAEAATTGLTFELGE 111

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQ--------------------YLGL----- 142
             F DL++EEF + Y G   P  E     +Q                    +  L     
Sbjct: 112 GPFTDLTHEEFSALYNGSMPPPEEEEGDDIQEEDEQVIATVVDGVDVNVAVHTNLSAGGP 171

Query: 143 ----PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
               P S DWRK GAVTP+KDQG+CGSCWAF  VA +EG +K+  G LVSLSEQ+L+DCD
Sbjct: 172 RPWPPRSRDWRKHGAVTPIKDQGRCGSCWAFPTVATIEGKHKIVRGNLVSLSEQQLIDCD 231

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
               N GC GG++ +A+ +I KIGG+TT   YPY+G   +C   K +  A  I G+ ++ 
Sbjct: 232 YT--NSGCKGGFVIRAYRWIRKIGGLTTSSAYPYKGARGKCM--KRRRAAARIAGWRSVR 287

Query: 259 ARYA----------------------FQLYSHGVFDEYCG-HQLNHGVTVVGYGE--DHG 293
           +R                        FQ Y  G+ +  C   +LNH VTVVGYG   D G
Sbjct: 288 SRSEVALVNAVAGQPVAVYISASGKNFQHYKKGILNGPCDTARLNHAVTVVGYGRQADTG 347

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
            KYW+VKNSWGT+WG+ GYI M R + +   G CGI     +P+ +
Sbjct: 348 AKYWIVKNSWGTTWGQEGYILMKRGTRNPR-GQCGIATSPVFPLMK 392


>gi|7239343|gb|AAF43193.1|AF228731_1 cathepsin L [Stylonychia lemnae]
          Length = 340

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/302 (41%), Positives = 178/302 (58%), Gaps = 32/302 (10%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFADLSNEEFI 119
           F +++ ++S+ Y S++E++ R   Y SN+ +I+  NSQN   SF L  N  AD +++E+ 
Sbjct: 42  FVHFMSRFSKAYKSKEEFEMRLQQYKSNIAFINNHNSQNDGTSFTLGPNHLADYTHDEY- 100

Query: 120 STYLGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
              LGY KP N+     + +     +P S+DWR++GAV  VKDQGQCGSCWAFS +A++E
Sbjct: 101 KKMLGY-KPRNKTGKEVYSTPNLKDIPESIDWREKGAVNAVKDQGQCGSCWAFSTIASLE 159

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
               ++TGKL SLSEQ+LVDC  N  N+GCNGG M  A ++I   GGV TE DYPY GK+
Sbjct: 160 SRYFIETGKLQSLSEQQLVDCSKNG-NEGCNGGDMGLAMDYIASAGGVETEKDYPYVGKD 218

Query: 237 DRCQTDKTKHHAVTITGYEAIPARYA---------------------FQLYSHGVFD-EY 274
             C  + +K  A        +P ++A                     FQ Y  G+FD  +
Sbjct: 219 QTCAFEASKEVATDKGHINIVPGKFATLQAAIAEGPVSVAIEADSLFFQFYRSGIFDSSW 278

Query: 275 CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
           CG  L+HGV  VGYG D+G++Y++V+NSW  SWG  GYI +  N   +  G+CGI M+  
Sbjct: 279 CGTNLDHGVAAVGYGVDNGKQYYIVRNSWSDSWGLKGYINIIANGDGN--GMCGIQMEPV 336

Query: 335 YP 336
            P
Sbjct: 337 VP 338


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 168/311 (54%), Gaps = 36/311 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFADLSN 115
             +    W  ++ + Y +  E   R   + +N +YID  N       + L  N+F DL N
Sbjct: 18  FSKELRAWKAEHGKSYRNHKEEMLRHVTWQANKKYIDEHNQHAGVFGYTLKMNQFGDLEN 77

Query: 116 EEFISTYLGY---NKPYN-EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
            EF S Y GY   N P   +P  P+ +   LPASVDW K+G VTPVK+QGQCGSCW+FSA
Sbjct: 78  SEFKSLYNGYRMSNAPRKGKPFVPAARVQDLPASVDWSKKGWVTPVKNQGQCGSCWSFSA 137

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
             ++EG +   TG L+SLSEQ LVDC     N GCNGG M+ AFE++ K  G+ TE  YP
Sbjct: 138 TGSMEGQHFNATGTLMSLSEQNLVDCSAAEGNHGCNGGLMDDAFEYVIKNNGIDTEASYP 197

Query: 232 YRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY-AFQLYSH 268
           YR  +  C+ + T     TI+GY                       AI A + +FQ YS 
Sbjct: 198 YRAVDSTCKFN-TADVGATISGYVDVTKDSESDLQVAVATIGPVSVAIDASHISFQFYSS 256

Query: 269 GVFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           GV+D        L+HGV  VGYG D  + YWLVKNSWG SWG +GYI M RN  +     
Sbjct: 257 GVYDPLICSSTNLDHGVLAVGYGTDGSKDYWLVKNSWGASWGMSGYIEMVRNHNNK---- 312

Query: 327 CGILMQASYPV 337
           CGI   ASYPV
Sbjct: 313 CGIATSASYPV 323


>gi|330805277|ref|XP_003290611.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
 gi|325079250|gb|EGC32859.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
          Length = 330

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 180/312 (57%), Gaps = 34/312 (10%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFA 111
           Y  Q+ +  F  W+K++ R Y    E+  ++  +  N+ +I   N+ +N    L   +FA
Sbjct: 24  YSAQTYQTSFLGWMKKHDRSY-HHHEFNNKYQAFKDNMDFIHNWNTNKNSKTVLGLTQFA 82

Query: 112 DLSNEEFISTYLG--YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           DL+NEE+   YLG   N    +  +  + + G P S+DWR +GAV+ VKDQGQCGSCW+F
Sbjct: 83  DLTNEEYRKIYLGTKVNVAPEKHNFNMIHFTG-PDSIDWRTKGAVSHVKDQGQCGSCWSF 141

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S   +VEG +++KTG +V+LSEQ LVDC     N GC+GG M  AF+FI   GGV TED 
Sbjct: 142 STTGSVEGAHQIKTGNMVTLSEQNLVDCSGKFGNNGCDGGLMVNAFKFIMSQGGVATEDS 201

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAI----------------------PARYAFQLYS 267
           YPY     +C+  K+   A  I+GY+ I                       ++ +FQLY 
Sbjct: 202 YPYNAVQGKCKFTKSMVGA-NISGYKEITQGSELELQAALTKQPVSIAIDASQQSFQLYK 260

Query: 268 HGVFD--EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
            GV+D  E   +QL+HGV  VGYG ++G+ Y++VKNSW  SWG+ GYI M+RN+ +    
Sbjct: 261 SGVYDEPECSSYQLDHGVLAVGYGTENGKDYYIVKNSWADSWGQDGYIFMSRNAKNQ--- 317

Query: 326 ICGILMQASYPV 337
            CG+   ASYP+
Sbjct: 318 -CGVATMASYPI 328


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 174/306 (56%), Gaps = 42/306 (13%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY SE E   R  IY  N   I   N +      S+KL  N+F DL + EF+ST  G
Sbjct: 57  HGKEYHSETEEYYRLKIYMENRLKIARHNEKYANNKASYKLAMNEFGDLLHHEFVSTRNG 116

Query: 125 YNKPY-NEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
           + + Y + PR  S       ++   LP +VDWRK+GAVTPVK+QGQCGSCWAFS   ++E
Sbjct: 117 FKRNYRSTPREGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLE 176

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G +  KTG++VSLSEQ LVDC     N GC GG M+ AF++I   GG+ TE  YPY G +
Sbjct: 177 GQHFRKTGRMVSLSEQNLVDCSGKFGNNGCEGGLMDNAFKYIKANGGIDTELSYPYNGTD 236

Query: 237 DRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE 273
             C  +K+   A T TG+  IP                       +  +FQ YS GV+DE
Sbjct: 237 GICHFEKSDVGA-TDTGFVDIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDE 295

Query: 274 -YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C  + L+HGV VVGYG   G+ YWLVKNSWGT+WG+ GYI M RN  +     CGI  
Sbjct: 296 PECSSESLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDDGYIYMTRNKENQ----CGIAS 351

Query: 332 QASYPV 337
            ASYP+
Sbjct: 352 SASYPL 357


>gi|297851332|ref|XP_002893547.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339389|gb|EFH69806.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 345

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 181/310 (58%), Gaps = 39/310 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFIST 121
           + W+  +SR Y  E E Q R  +++ N+++I+  N+  + S+KL  NKF D + EEF++T
Sbjct: 39  QKWMINFSRVYDDEFEKQMRLEVFTENLKFIENFNNMGSQSYKLGVNKFTDWTKEEFLAT 98

Query: 122 YLGYN-----KPY---NE--PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           + G +      P+   NE  P W       L  + DWR EGAVTPVK QG+CG CWAFSA
Sbjct: 99  HTGLSGINVTSPFEVVNETTPAWNWTVSDVLGTTKDWRNEGAVTPVKYQGECGGCWAFSA 158

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           +AAVEG+ K+  G L+SLSEQ+L+DC    +N GC GG M +AF +I K GGV++E+ YP
Sbjct: 159 IAAVEGLTKIARGNLISLSEQQLLDC-AREQNNGCKGGTMIEAFNYIVKNGGVSSENAYP 217

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLYSHG 269
           Y+ K   C+++     A+ I G+E +P                      +   F  YS G
Sbjct: 218 YQVKEGPCRSNDIP--AIVIRGFENVPSNNERALLEAVSRQPVAVDIDASETGFIHYSGG 275

Query: 270 VFDEY-CGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V++   CG  +NH VT+VGYG    G KYWL KNSWG +WGE GYIR+ R+      G+C
Sbjct: 276 VYNARDCGTSVNHAVTLVGYGTSQEGIKYWLAKNSWGKTWGENGYIRIRRDVEWPQ-GMC 334

Query: 328 GILMQASYPV 337
           G+   ASYPV
Sbjct: 335 GVAQYASYPV 344


>gi|110737404|dbj|BAF00646.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 345

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 179/321 (55%), Gaps = 42/321 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFA 111
           +  QSM ++ E W+ ++SREY  E E   R  ++  N+++I+  N + N S+KL  N+FA
Sbjct: 30  FREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFA 89

Query: 112 DLSNEEFISTYLGYN------------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKD 159
           D +NEEF++ + G              K  +   W     +    S DWR EGAVTPVK 
Sbjct: 90  DWTNEEFLAIHTGLKGLTEVSPSKVVAKTISSQTWNVSDMV--VESKDWRAEGAVTPVKY 147

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QGQCG CWAFSAVAAVEG+ K+  G LVSLSEQ+L+DCD    ++ C+GG M  AF ++ 
Sbjct: 148 QGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSEQQLLDCD-REYDRDCDGGIMSDAFNYVV 206

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY------------------ 261
           +  G+ +E+DY Y+G +  C+++     A  I+G++ +P+                    
Sbjct: 207 QNRGIASENDYSYQGSDGGCRSN--ARPAARISGFQTVPSNNERALLEAVSRQPVSVSMD 264

Query: 262 ----AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMA 316
                F  YS GV+D  CG   NH VT VGYG    G KYWL KNSWG +W E GYIR+ 
Sbjct: 265 ATGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWEEKGYIRIR 324

Query: 317 RNSPSSNIGICGILMQASYPV 337
           R+      G+CG+   A YPV
Sbjct: 325 RDVAWPQ-GMCGVAQYAFYPV 344


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/300 (43%), Positives = 169/300 (56%), Gaps = 32/300 (10%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG 124
           W   +++ Y  E E   R+ I+  N+  I   NS++ +  L  N F D++N EF +   G
Sbjct: 30  WKMAHNKAYSHESEENVRYAIWKDNMNRITEYNSKSKNVILRMNHFGDMTNTEFRAKMNG 89

Query: 125 Y--NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
              +K  N   +    +   P +VDWR EG VTPVK+QGQCGSCWAFS+  A+EG +  K
Sbjct: 90  LLLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTGALEGQHFKK 149

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TG+LVSLSEQ LVDC  +  N GCNGG M+ AF +I   GG+ TE  YPY G++  C+  
Sbjct: 150 TGRLVSLSEQNLVDCSTDYGNNGCNGGLMDNAFSYIKANGGIDTETGYPYEGQDGTCRYS 209

Query: 243 KTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE-YCG-H 277
           K+   A   TG+  IP                       +  +FQ Y  GV+DE  C   
Sbjct: 210 KSSIGA-DDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCSPS 268

Query: 278 QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            L+HGV VVGYG D+G+ YWLVKNSWGT WG  GYI M+RN    N   CGI  +ASYP+
Sbjct: 269 ALDHGVLVVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRN----NQNQCGIASKASYPL 324


>gi|242070333|ref|XP_002450443.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
 gi|241936286|gb|EES09431.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
          Length = 351

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/350 (38%), Positives = 191/350 (54%), Gaps = 42/350 (12%)

Query: 22  RMMLRNAVLSLFLLWV---LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDE 78
           + ++  AV  L +L +   +G    A        Y  ++M  R E W+ ++ R Y  E E
Sbjct: 9   KPLITAAVALLTVLAIANCIGCAVAARDLSSSTGYGEEAMTARHEKWMVEHGRTYKDEAE 68

Query: 79  WQRRFGIYSSNVQYIDYINSQ--NLSFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWP 135
             RRF ++ +N  ++D  N+      + L  N+FAD++++EF++ Y G+   P    + P
Sbjct: 69  KARRFQVFKANAAFVDTSNAAAGGKKYHLAINRFADMTHDEFMARYTGFKPLPATGKKMP 128

Query: 136 SVQYLGLPAS------VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
             +Y  +  S      VDWRK+GAVT VK+Q +CG CWAFSAVAA+EG++++ TG+LVSL
Sbjct: 129 GFKYANVTLSSEDQQAVDWRKKGAVTDVKNQQKCGCCWAFSAVAAIEGMHQINTGELVSL 188

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ+LVDC  N  N GC GG ME AF+++    G+ TE  YPY      CQ  +    AV
Sbjct: 189 SEQQLVDCSTNGNNNGCGGGTMEDAFQYVIGNNGIATEAAYPYTAMQGMCQNVQP---AV 245

Query: 250 TITGYEAIP--------ARYA------------FQLYSHGVFD-EYCGHQLNHGVTVVGY 288
            +  Y+ +P        A  A            FQ Y  GV   + CG  LNH VT VGY
Sbjct: 246 AVRSYQQVPRDDEDALAAAVAGQPVSVAVDANNFQFYKGGVMTADSCGTNLNHAVTAVGY 305

Query: 289 G-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  + G  YWL+KN WG++WGE GY+R+ R      +G CG+   ASYPV
Sbjct: 306 GTAEDGTPYWLLKNQWGSTWGEEGYLRLQR-----GVGACGVAKDASYPV 350


>gi|348687948|gb|EGZ27762.1| papain-like cysteine protease C1 [Phytophthora sojae]
          Length = 533

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 176/318 (55%), Gaps = 46/318 (14%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFAD 112
           P   E  F  W+  +   +    E+ RR   Y +N  YI   N++N     KL  N F+ 
Sbjct: 21  PLEYEHEFSAWMSAHGVTFSDALEFARRLENYIANDMYILEHNAENAWTGVKLGHNAFSH 80

Query: 113 LSNEEFISTYLGYNKP--YNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           +S +EF     G   P  Y E R        W  V+   +P++VDW  +G VTPVK+QG 
Sbjct: 81  MSFDEFKFKMTGLVLPEGYLEQRLASRVDGLWSDVE---VPSAVDWVDKGGVTPVKNQGM 137

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   AVEG   + +GKL+SLSEQELVDCD N +  GCNGG M+ AF++I   G
Sbjct: 138 CGSCWAFSTTGAVEGATFVSSGKLLSLSEQELVDCDHNGD-MGCNGGLMDHAFQWIEDHG 196

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE---------------------AIPA-R 260
           G+ +EDDY Y+ K   C+   +    V +TG++                     AI A +
Sbjct: 197 GICSEDDYEYKAKAQVCRKCDS---VVKVTGFQDVNPQDEHALKVAVAQQPVSVAIEADQ 253

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR--N 318
            AFQ Y  GVF+  CG +L+HGV  VGYG D+G+K+W VKNSWG SWGE GYIR+AR  N
Sbjct: 254 KAFQFYKSGVFNLTCGTRLDHGVLAVGYGNDNGQKFWKVKNSWGASWGEQGYIRLAREEN 313

Query: 319 SPSSNIGICGILMQASYP 336
            P+   G CGI    SYP
Sbjct: 314 GPA---GQCGIASVPSYP 328


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 181/321 (56%), Gaps = 46/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADL 113
           ++E ++ +  ++ ++Y  E E + R  I++ N   I   N    +  +SFK+  NK+AD+
Sbjct: 24  IKEEWQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADM 83

Query: 114 SNEEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
            + EF  T  G+N             +    + S +++ LP SVDWR +GAVT VKDQG 
Sbjct: 84  LHHEFHETMNGFNYTLHKQLRASDATFTGVTFISPEHVKLPQSVDWRNKGAVTGVKDQGH 143

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+  A+EG +  KTG L+SLSEQ LVDC     N GCNGG M+ AF +I   G
Sbjct: 144 CGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 203

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G+ TE  YPY G +D C  +K    A T  G+  IP                       +
Sbjct: 204 GIDTEKSYPYEGIDDSCHFNKGTIGA-TDRGFTDIPQGDEKKLAQAVATIGPVSVAIDAS 262

Query: 260 RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMA 316
             +FQ YS GV+DE  C  Q L+HGV VVGYG D +G+ YWLVKNSWGT+WG+ G+I+MA
Sbjct: 263 HESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFIKMA 322

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CGI   +SYP+
Sbjct: 323 RNDDNQ----CGIATASSYPL 339


>gi|405966498|gb|EKC31776.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 181/317 (57%), Gaps = 40/317 (12%)

Query: 55  PQS-MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNK 109
           P+S ++  ++ +LK + ++YG+E+E +RR  I+  N+ YI+  N      + SF L  N+
Sbjct: 19  PKSELDSEWQLYLKAHGKQYGAEEEARRRV-IWEGNLDYIEKHNLAADRGDYSFWLGMNE 77

Query: 110 FADLSNEEFISTYLGYNKPYNEPR----WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           + D++NEEF ST  GY       R     P      LP +VDWR +G VTP+K+QGQCGS
Sbjct: 78  YGDMTNEEFRSTMNGYKMRNGTSRGSLYLPPSNIGDLPDTVDWRPKGYVTPIKNQGQCGS 137

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FSA  ++EG    KTGKL SLSEQ LVDC     N GC GG M+ AF++I    G+ 
Sbjct: 138 CWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDDAFQYIKDNSGID 197

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-----------------------YA 262
           TE  YPY  KN +C+ +     A T +G+  I ++                        +
Sbjct: 198 TESSYPYEAKNGKCRFNAANVGA-TDSGFTDIKSKSESDLQSAVATVGPISVAIDASHMS 256

Query: 263 FQLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           FQLY  GV+ E +C   +L+HGV  VGYG + G+ YWLVKNSWG SWG+ GYI M+RN  
Sbjct: 257 FQLYRSGVYHEFFCSETRLDHGVLAVGYGTESGKDYWLVKNSWGESWGQKGYIMMSRNKR 316

Query: 321 SSNIGICGILMQASYPV 337
           ++    CGI   ASYP 
Sbjct: 317 NN----CGIATSASYPT 329


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 178/314 (56%), Gaps = 38/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +   +E +   + + Y S  E   RF I++ N  +I   N +     +S+KL  N+FADL
Sbjct: 23  LRTEWEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQFADL 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPS------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
              EF+    GY       R  +      +    LP +VDWRK+GAVTPVKDQGQCGSCW
Sbjct: 83  LPHEFVKMMNGYQGKRLAGRGSTYLPPANLNDSSLPKTVDWRKKGAVTPVKDQGQCGSCW 142

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS+  ++EG + LKTGKLVSLSEQ LVDC     NQGCNGG M+ +F +I   GG+ TE
Sbjct: 143 AFSSTGSLEGQHFLKTGKLVSLSEQNLVDCSSAYGNQGCNGGLMDNSFNYIKANGGIDTE 202

Query: 228 DDYPYRGKNDRCQ-------------------TDKTKHHAVTITGYEAI---PARYAFQL 265
           D YPY  ++  C+                   ++K    AV   G  ++    ++ +FQL
Sbjct: 203 DSYPYEAEDGDCRYKKEDVGATDTGFVDIKEGSEKDLQKAVATVGPVSVAIDASQQSFQL 262

Query: 266 YSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE  C  + L+HGV  VGYG  +G+KYWLVKNSW  +WG+ GYI M+R+  +  
Sbjct: 263 YSEGVYDEPNCSSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWGQDGYILMSRDKNNQ- 321

Query: 324 IGICGILMQASYPV 337
              CGI   ASYP+
Sbjct: 322 ---CGIASSASYPL 332


>gi|1709574|sp|P10056.2|PAPA3_CARPA RecName: Full=Caricain; AltName: Full=Papaya peptidase A; AltName:
           Full=Papaya proteinase III; Short=PPIII; AltName:
           Full=Papaya proteinase omega; Flags: Precursor
 gi|18098|emb|CAA46862.1| proteinase omega [Carica papaya]
          Length = 348

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 188/323 (58%), Gaps = 39/323 (12%)

Query: 48  GYPQKYDPQSMEER----FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSF 103
           GY Q  D  +  ER    F +W+  +++ Y + DE   RF I+  N+ YID  N +N S+
Sbjct: 32  GYSQ--DDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSY 89

Query: 104 KLTDNKFADLSNEEFISTYLG------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
            L  N+FADLSN+EF   Y+G        + Y+E  + +   + LP +VDWRK+GAVTPV
Sbjct: 90  WLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDE-EFINEDTVNLPENVDWRKKGAVTPV 148

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           + QG CGSCWAFSAVA VEGINK++TGKLV LSEQELVDC+  S   GC GGY   A E+
Sbjct: 149 RHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS--HGCKGGYPPYALEY 206

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG------------YEAIPAR----- 260
           + K  G+     YPY+ K   C+  +     V  +G              AI  +     
Sbjct: 207 VAK-NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVV 265

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
                  FQLY  G+F+  CG +++H VT VGYG+  G+ Y L+KNSWGT+WGE GYIR+
Sbjct: 266 VESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRI 325

Query: 316 ARNSPSSNIGICGILMQASYPVK 338
            R +P ++ G+CG+   + YP K
Sbjct: 326 KR-APGNSPGVCGLYKSSYYPTK 347


>gi|242093944|ref|XP_002437462.1| hypothetical protein SORBIDRAFT_10g027570 [Sorghum bicolor]
 gi|241915685|gb|EER88829.1| hypothetical protein SORBIDRAFT_10g027570 [Sorghum bicolor]
          Length = 366

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 178/334 (53%), Gaps = 59/334 (17%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFAD 112
           +S+   +E W   Y  +R++G   E  RRF ++  N + I   N Q N ++ L  N+F+D
Sbjct: 42  ESLWALYERWCAHYNMARDHG---EKTRRFDLFKENARRIYEHNHQGNATYTLGLNRFSD 98

Query: 113 LSNEEFISTYLGY------------------------NKPYNEPRWPSVQYLGLPASVDW 148
           +++EEF  +  G                         +  +N         LG P +VDW
Sbjct: 99  MTDEEFNRSPYGGCLTAPRMSDDEIEELHHHHHQQEDDGSFNLTHGSGGGKLGAPPAVDW 158

Query: 149 RKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCN 207
           R   AVT VKDQG  CGSCWAFSA+AAVEGIN ++T  LV LSEQ+LVDCD    N GCN
Sbjct: 159 RGR-AVTRVKDQGPTCGSCWAFSAIAAVEGINAIRTRNLVPLSEQQLVDCD--KLNHGCN 215

Query: 208 GGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--------- 258
           GG M  AF F+ +  GV  E  YPY G+  RC+        VTI GY+ +P         
Sbjct: 216 GGLMTTAFSFVVRNRGVVPEGAYPYMGREGRCK--HVMAPPVTIYGYQRVPRFDANALMN 273

Query: 259 -------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGT 305
                        + + F+ Y  GVF+  CG +L H  T VGYG D G  +W+VKNSWG 
Sbjct: 274 AVAAQPVSVAIEASSFEFRHYQGGVFNGNCGGRLGHAATAVGYGADAGGPFWIVKNSWGP 333

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
            WGE GY+R++RN+P    G+CGIL + SYPVKR
Sbjct: 334 GWGEGGYVRISRNTPVRQ-GVCGILTENSYPVKR 366


>gi|156371477|ref|XP_001628790.1| predicted protein [Nematostella vectensis]
 gi|156215775|gb|EDO36727.1| predicted protein [Nematostella vectensis]
          Length = 330

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 180/325 (55%), Gaps = 38/325 (11%)

Query: 44  AWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSF 103
           A + G+  K+D    E++++ W   ++++Y +  E   R  I+  N++ I   N++  SF
Sbjct: 12  AVASGFVVKFDED--EQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGHSF 69

Query: 104 KLTDNKFADLSNEEFISTYLGYNKPYNE------PRWPSVQYLGLPASVDWRKEGAVTPV 157
            L  N   DL+ +EF   Y G    Y+         + +  ++ +P +VDWRKEG VTPV
Sbjct: 70  TLAMNHLGDLTQDEFRYFYTGMRSHYSNYTKKQGSAFLAPSHVQVPDTVDWRKEGYVTPV 129

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+QGQCGSCWAFS   ++EG N  KTGKLVSLSEQ LVDC     N GC GG M+ AF++
Sbjct: 130 KNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYAFKY 189

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY--------EAI------------ 257
           I + GG+ TE+ YPY  +NDRC+  K+   AV  TG+        EA+            
Sbjct: 190 IKENGGIDTEESYPYEARNDRCRFQKSNIGAVD-TGFVDVTHGDEEALKTAAGTVGPISV 248

Query: 258 ---PARYAFQLYSHGVFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGY 312
                  +FQ Y  GV++        L+HGV VVGYG   G  YWLVKNSWG  WG  GY
Sbjct: 249 AIDAGHMSFQFYHSGVYNNAGCSSTSLDHGVLVVGYGTYQGSDYWLVKNSWGERWGMEGY 308

Query: 313 IRMARNSPSSNIGICGILMQASYPV 337
           I M+RN  +     CG+  QASYP+
Sbjct: 309 IMMSRNKNNQ----CGVATQASYPL 329


>gi|326493706|dbj|BAJ85314.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 175/330 (53%), Gaps = 52/330 (15%)

Query: 55  PQS-MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSF---------- 103
           P+S + ERF  W+ +YS+ Y  + E + RF ++ +N   I  ++ QN +           
Sbjct: 40  PESEVRERFSKWMIKYSKHYSCKQEEEMRFQVFKNNTNSIGQLDRQNPNPGVGGALGPSG 99

Query: 104 -------KLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL----PASVDWRKEG 152
                  K++ N+F DLS  E I  Y G N      R  S  YL      P  VDWR  G
Sbjct: 100 SQVHTFQKVSMNRFGDLSPREVIQQYTGLNT--TSFRTASPTYLPYHSFKPCCVDWRSSG 157

Query: 153 AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYME 212
           AVT VK QG CGSCWAF+AVAA+EG+NK++TG+LVSLSEQ LVDCD  S   GC GG+ +
Sbjct: 158 AVTGVKHQGTCGSCWAFAAVAAIEGMNKIRTGELVSLSEQVLVDCDTVST--GCGGGHSD 215

Query: 213 KAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIPAR----------- 260
            A   +   GG+T+E+ YPY G   +C  DK    H  +I G++A+P+            
Sbjct: 216 SAMALVAARGGITSEERYPYAGFQGKCDVDKLMFDHQASIKGFKAVPSNNEAQLAIAVAM 275

Query: 261 -----------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE--KYWLVKNSWGTSW 307
                       AFQ YS G++   C   +NH VT+VGY E  GE  KYW+ KNSW   W
Sbjct: 276 QPVTVYIDASGSAFQFYSGGIYRGPCSANVNHAVTIVGYCEGPGEGNKYWIAKNSWSNDW 335

Query: 308 GEAGYIRMARNSPSSNIGICGILMQASYPV 337
           GE GY+ +A++   S  G CG+     YP 
Sbjct: 336 GEQGYVYLAKDVAWST-GTCGLATSPFYPT 364


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  225 bits (573), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 180/321 (56%), Gaps = 46/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           ++E +  +  ++ + Y  E E + R  I++ N   I   N +     ++FK+  NK+AD+
Sbjct: 23  IKEEWHTFKLEHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYADM 82

Query: 114 SNEEFISTYLGYNKPYN------EPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
            + EF  T  G+N   +      +P +  + ++      LP SVDWR++GAVT VKDQG 
Sbjct: 83  LHHEFRETMNGFNYTLHKELRASDPSFTGITFISPAHVKLPKSVDWREKGAVTAVKDQGH 142

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+  A+EG +  KTG LVSLSEQ LVDC     N GCNGG M+ AF +I   G
Sbjct: 143 CGSCWAFSSTGALEGQHFRKTGTLVSLSEQNLVDCSAKYGNNGCNGGLMDNAFRYIKDNG 202

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G+ TE  YPY G +D C  +K    A T  G+  IP                       +
Sbjct: 203 GIDTEKSYPYEGIDDSCHFNKDSVGA-TDRGFADIPQGNEKKMAEAVATIGPVSVAIDAS 261

Query: 260 RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMA 316
             +FQ YS G+++E  C  Q L+HGV VVGYG D  G+ YWLVKNSWGT+WG+ G+I+MA
Sbjct: 262 HESFQFYSEGIYNEPECNSQNLDHGVLVVGYGTDESGKDYWLVKNSWGTTWGDKGFIKMA 321

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CGI   +SYP+
Sbjct: 322 RNEDNQ----CGIASASSYPL 338


>gi|112490572|pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490573|pdb|2FO5|B Chain B, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490574|pdb|2FO5|C Chain C, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490575|pdb|2FO5|D Chain D, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
          Length = 262

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/223 (52%), Positives = 144/223 (64%), Gaps = 28/223 (12%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP SVDWR++GAVT VKDQG+CGSCWAFS V +VEGIN ++TG LVSLSEQEL+DCD  +
Sbjct: 4   LPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD-TA 62

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHA---VTITGYEAIP 258
           +N GC GG M+ AFE+I   GG+ TE  YPYR     C   +   ++   V I G++ +P
Sbjct: 63  DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVP 122

Query: 259 ARY----------------------AFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEK 295
           A                        AF  YS GVF   CG +L+HGV VVGYG  + G+ 
Sbjct: 123 ANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKA 182

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YW VKNSWG SWGE GYIR+ ++S +S  G+CGI M+ASYPVK
Sbjct: 183 YWTVKNSWGPSWGEQGYIRVEKDSGASG-GLCGIAMEASYPVK 224


>gi|157278117|ref|NP_001098157.1| cathepsin S precursor [Oryzias latipes]
 gi|50251130|dbj|BAD27582.1| cathepsin S [Oryzias latipes]
          Length = 327

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 173/314 (55%), Gaps = 42/314 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDNKFADL 113
           +++ +  W K YS+ Y  E E   R  I+  N++ I   N   S  L S++L  N   DL
Sbjct: 21  LDQHWNLWKKTYSKTYSHEIEEFGRRRIWEENLEMISVHNLEVSLGLHSYELAMNHLGDL 80

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQY------LGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           + EE I++  G   P    R   + Y        +P SVDWR+ G VT VK QG+CGSCW
Sbjct: 81  TIEELIASLTGTVAPVGLER---IHYDLVKINTSVPESVDWREGGLVTSVKTQGRCGSCW 137

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSAV A+EG  K  TG L SLS Q LVDC     N GC GG+M  AF+++ K  G++++
Sbjct: 138 AFSAVGALEGQLKKTTGILTSLSPQNLVDCSTKYGNYGCKGGFMSNAFQYVIKNQGISSD 197

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQ 264
             YPY GK D+C+ D +KH A   TGY  +P                       +R  F 
Sbjct: 198 AAYPYIGKRDKCKYD-SKHRAANCTGYNFLPKGDEFALKVGVATIGPISVAIDASRPKFL 256

Query: 265 LYSHGVF-DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
            Y HGV+ D  C H +NHGV VVGYG ++GE YWLVKNSWG  +G+ GYI+MARN  +  
Sbjct: 257 FYRHGVYKDHSCSHNVNHGVLVVGYGTENGEDYWLVKNSWGERYGDGGYIKMARNRRNQ- 315

Query: 324 IGICGILMQASYPV 337
              CGI + A +PV
Sbjct: 316 ---CGIALYACFPV 326


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/355 (39%), Positives = 193/355 (54%), Gaps = 61/355 (17%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           +L    L VL I A ++       YD   + E ++ +  ++ + Y ++ E + R  I+  
Sbjct: 3   ILFFIALTVLSINAVSF-------YD--LVMEEWQLFKAEHKKNYNNDVEEKFRMKIFMD 53

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPS-------- 136
           N Q I   N++     + +KL  NK++D+ + EFI+T+ G+NK    P   S        
Sbjct: 54  NKQKITKHNTKYQRGEVGYKLGLNKYSDMLHHEFINTFNGFNKSIIPPHLRSNNGKTHLK 113

Query: 137 ------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
                    + LP  VDW K GAVTPVKDQG CGSCWAFSA  A+EG++  KT  LVSLS
Sbjct: 114 GSFFIPPANVKLPKHVDWVKLGAVTPVKDQGHCGSCWAFSATGALEGLHFRKTKVLVSLS 173

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ L+DC     N GCNGG M++AF+++   GG+ TE  YPY G ND C+ +     A+ 
Sbjct: 174 EQNLIDCSTEEGNNGCNGGLMDQAFQYVRINGGIDTERSYPYEGNNDVCRYEPENSGAID 233

Query: 251 ITGYEAIP-----------------------ARYAFQLYSHGV-FDEYCGHQ---LNHGV 283
            TGY  +P                       ++ +FQLYS GV F+  C ++   L+HGV
Sbjct: 234 -TGYTDVPLGDEDALKSAVATVGPVSVAIDASQESFQLYSSGVYFEPNCKNEPESLDHGV 292

Query: 284 TVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
            VVGYG D    + YWLVKNSWG SWGE GYI+MARN+ +     CGI  Q S+P
Sbjct: 293 LVVGYGTDEETQQDYWLVKNSWGDSWGENGYIKMARNADNQ----CGIATQPSFP 343


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  224 bits (572), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 181/318 (56%), Gaps = 44/318 (13%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +E +  ++S++Y SE E   R  I++ N   I   N      + ++KL+ NK+ D+ +
Sbjct: 27  EEWEAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDMLH 86

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLG-----------LPASVDWRKEGAVTPVKDQGQCG 164
            EF+ST  G+   +      +  Y G           LP +VDWR +GAVTP+KDQGQCG
Sbjct: 87  HEFVSTMNGFRGNHTGGYKNNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQGQCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFSA  A+EG    KTG+LVSLSEQ LVDC     N GCNGG M+ AFE++ + GG+
Sbjct: 147 SCWAFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKFGNNGCNGGLMDNAFEYVKENGGI 206

Query: 225 TTEDDYPYRGKNDRCQ-------------------TDKTKHHAVTITG--YEAIPARY-A 262
            TE+ YPY  ++++C                    ++     AV   G    AI A + +
Sbjct: 207 DTEESYPYDAEDEKCHYNPRAAGAEDKGFVDVREGSEHALKKAVATVGPVSVAIDASHES 266

Query: 263 FQLYSHGVF--DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
           FQ YSHGV+   E     L+HGV VVGYG +D G  YWLVKNSWGT+WG+ GY++MARN 
Sbjct: 267 FQFYSHGVYIEPECSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNR 326

Query: 320 PSSNIGICGILMQASYPV 337
            +     CGI   AS+P+
Sbjct: 327 DNQ----CGIASSASFPL 340


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  224 bits (572), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 37/313 (11%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFAD 112
           S+ ++++N+  ++ R Y S  E + R  ++  N Q+ID  N++     ++F L  N+F D
Sbjct: 17  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 76

Query: 113 LSNEEFISTYLGY-NKPYNEPRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +++EE ++T  G+   P   P          LP  VDWR +GAVTPVKDQ QCGSCWAFS
Sbjct: 77  MTSEEIVATMNGFLGAPTRRPAAVLKADDETLPEKVDWRTKGAVTPVKDQKQCGSCWAFS 136

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
              ++EG + LK GKLVSLSEQ LVDC     N GC GG M++AF +I    G+ TED Y
Sbjct: 137 TTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFRNMGCMGGLMDQAFRYIKANKGIDTEDSY 196

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYS 267
           PY  ++ +C+ D +   A T TGY  +                        ++  F  Y 
Sbjct: 197 PYEAQDGKCRFDASNVGA-TDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYH 255

Query: 268 HGVF-DEYCGH-QLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            GV+ D++C    L+HGV  VGYG D +G  +WLVKNSW TSWG+ GYI+M+RN  ++  
Sbjct: 256 TGVYHDDHCSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNN-- 313

Query: 325 GICGILMQASYPV 337
             CGI  QASYP+
Sbjct: 314 --CGIASQASYPL 324


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/306 (43%), Positives = 173/306 (56%), Gaps = 42/306 (13%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY SE E   R  IY  N   I   N +     +S+KL  N++ D+ + EF+ST  G
Sbjct: 36  HGKEYQSETEEYYRLKIYMENRMMIARHNEKYANNKVSYKLAMNEYGDMLHHEFVSTRNG 95

Query: 125 YNKPY-NEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
           + + Y ++PR  S       ++   LP +VDWRK+GAVTPVK+QGQCGSCWAFS   ++E
Sbjct: 96  FRRDYRSKPRQGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLE 155

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G +  K+G +VSLSEQ LVDC     N GC GG M+ AF++I   GG+ TE  YPY G +
Sbjct: 156 GQHFRKSGDMVSLSEQNLVDCSTAFGNNGCEGGLMDNAFKYIKANGGIDTEKSYPYNGTD 215

Query: 237 DRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE 273
             C   K+   A T TG+  IP                       +  +FQ YS GV+DE
Sbjct: 216 GTCHFKKSDVGA-TDTGFVDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDE 274

Query: 274 -YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C  + L+HGV VVGYG    + YWLVKNSWGT+WG+ GYI M RN  +     CGI  
Sbjct: 275 PECSSENLDHGVLVVGYGTKDDQDYWLVKNSWGTTWGDGGYIYMTRNKDNQ----CGIAS 330

Query: 332 QASYPV 337
            ASYP+
Sbjct: 331 SASYPL 336


>gi|357477225|ref|XP_003608898.1| Cysteine proteinase, partial [Medicago truncatula]
 gi|355509953|gb|AES91095.1| Cysteine proteinase, partial [Medicago truncatula]
          Length = 260

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/263 (48%), Positives = 157/263 (59%), Gaps = 51/263 (19%)

Query: 108 NKFADLSNEEFISTY----LGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVK 158
           NKFAD++N EF S Y    + +++ +      +  ++     G+P+S+DWRK GAVT VK
Sbjct: 3   NKFADMTNYEFRSIYADSKVNHHRMFRGMSHDNGPFMYENVEGVPSSIDWRKIGAVTGVK 62

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           DQGQCGSCWAFS + AVEGIN++KT KLVSLSEQELVDCD    NQGCNGG ME AFEFI
Sbjct: 63  DQGQCGSCWAFSTIVAVEGINQIKTQKLVSLSEQELVDCDTEV-NQGCNGGLMEYAFEFI 121

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA---------------- 262
            K  G+TTE +YPY  K+  C   K    AV+I G+E +PA                   
Sbjct: 122 -KQNGITTETNYPYAAKDGTCNIQKENKPAVSIDGHENVPANNEKALLKAAANQPISVAI 180

Query: 263 ------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
                 FQ YS GVF  +CG +LNHGV                 NSWG+ WGE GYIRM 
Sbjct: 181 DAGGSDFQFYSEGVFTGHCGTELNHGV-----------------NSWGSEWGEQGYIRMQ 223

Query: 317 RNSPSSNIGICGILMQASYPVKR 339
           R + S   G+CGI M+ASYP+K+
Sbjct: 224 R-AISHKQGLCGIAMEASYPIKK 245


>gi|403333364|gb|EJY65772.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 192/315 (60%), Gaps = 34/315 (10%)

Query: 51  QKYDPQSMEER-FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDN 108
           Q Y P + E+  F N++ +Y + YG+++E+  R  ++  N+  +   N++N ++++L  N
Sbjct: 31  QLYTPITAEDHAFTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNARNDVTYRLGLN 90

Query: 109 KFADLSNEEFISTYLGYNKPYNE-PRWPSVQYLGLPAS--VDWRKEGAVTPVKDQGQCGS 165
           KFAD +  E+    LG+    N+ PR  +++ LG P +  V+W ++GAVTPVKDQGQCGS
Sbjct: 91  KFADYTEAEY-KRLLGFGGQKNKNPR--NIKVLGAPKNDGVNWVEQGAVTPVKDQGQCGS 147

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FSA  A+EG  K++ G L SLSEQ+LVDC     N+GC GG+M++AF+++ +   + 
Sbjct: 148 CWSFSATGAMEGHAKIQFGTLYSLSEQQLVDCSQAEGNEGCGGGWMDQAFQYVEQT-ALE 206

Query: 226 TEDDYPYRGKNDRCQ------------TDKTKHHAVTITGY-------EAIPA-RYAFQL 265
           TED YPY   +D C+             D T ++   +           AI A +  FQ 
Sbjct: 207 TEDQYPYEAVDDTCRASSAGVVKVDSFVDVTPNNVNELKAALDKGPVSVAIEADQMVFQF 266

Query: 266 YSHGVF-DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV  D  CG  L+HGV  VGYG + G+ Y+LVKNSWG SWGE GY+++A  SP +  
Sbjct: 267 YSGGVINDASCGTTLDHGVLAVGYGNESGQDYFLVKNSWGASWGEEGYVKIAA-SPDN-- 323

Query: 325 GICGILMQASYPVKR 339
            ICGIL QASYP+ +
Sbjct: 324 -ICGILSQASYPIMK 337


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 174/320 (54%), Gaps = 45/320 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFADL 113
           ++E +  +  Q+ + Y +E E + R  I++ N   I   N       +S+KL  NK+AD+
Sbjct: 24  IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLG----------LPASVDWRKEGAVTPVKDQGQC 163
            + EF  T  GYN    +        +G          +P SVDWR+ GAVT VKDQG C
Sbjct: 84  LHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHC 143

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS+  A+EG +  K G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG
Sbjct: 144 GSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGG 203

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------AR 260
           + TE  YPY G +D C  +K    A T TG+  IP                       + 
Sbjct: 204 IDTEKSYPYEGIDDSCHFNKATIGA-TDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASH 262

Query: 261 YAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMAR 317
            +FQLYS GV++E  C  Q L+HGV VVGYG D  G  YWLVKNSWGT+WGE GYI+MAR
Sbjct: 263 ESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMAR 322

Query: 318 NSPSSNIGICGILMQASYPV 337
           N  +     CGI   +SYP 
Sbjct: 323 NQNNQ----CGIATASSYPT 338


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/349 (40%), Positives = 189/349 (54%), Gaps = 52/349 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR ++L  F++    +   A S         + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRISLLCAFVV----VTTAASSH--------EILRTQWEAFKATHKKSYQSNMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPS--- 136
            I+S N   +   N +     +S+KL  N+F DL   EF   + GY       R  +   
Sbjct: 49  KIFSENSLLVARHNEKYARGLVSYKLGMNQFGDLLPHEFARMFNGYRGARTAGRGSTFLP 108

Query: 137 ---VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
              V Y  LP S+DWR++GAVTPVK+QGQCGSCWAFS   ++EG + LKTG LVSLSEQ 
Sbjct: 109 PANVNYSSLPQSMDWREKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFLKTGVLVSLSEQN 168

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDC     N GC GG M+ AF++I   GG+ TE  YPY  ++  C+  K ++   T TG
Sbjct: 169 LVDCSETFGNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEAEDGECRF-KKQNVGATDTG 227

Query: 254 Y----------------------EAIPARY-AFQLYSHGVFDEY--CGHQLNHGVTVVGY 288
           +                       AI A + +FQLYS GV+DE      QL+HGV VVGY
Sbjct: 228 FVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECSSEQLDHGVLVVGY 287

Query: 289 GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G + G+KYWLVKNSW  SWG+ GYI+M+R+  +     CGI   ASYP+
Sbjct: 288 GVEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQ----CGIASAASYPL 332


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 180/315 (57%), Gaps = 47/315 (14%)

Query: 64  NWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFI 119
           N+  ++++ Y ++DE   RF +++SN + I+  N +      SF L+ NKFAD++N EF 
Sbjct: 45  NFKLKHAKSYKTKDEELLRFQVFASNHKVIEQHNIEYEAGQHSFALSLNKFADMTNAEFR 104

Query: 120 STYLGYNKPYNEPRWPSVQY------------LGLPASVDWRKEGAVTPVKDQGQCGSCW 167
               G+  P       S               + +P SVDWRKEG VT VKDQG CGSCW
Sbjct: 105 QRMNGFKLPAKRKLAKSQPLKEDGMIFEMPDNVTIPDSVDWRKEGYVTKVKDQGSCGSCW 164

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA  ++EG +  +TGKLVSLSEQ LVDCDVN +++GCNGGYM+ AF+++    G+ TE
Sbjct: 165 AFSATGSLEGQHYKQTGKLVSLSEQNLVDCDVNGDDEGCNGGYMDGAFQYVETNKGIDTE 224

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQ 264
             YPY+G++ RC+  K++    T TG+  IP                       A + FQ
Sbjct: 225 ASYPYKGRDGRCRF-KSEDVGATDTGFVDIPEGNETLLEAAIATVGPVSVAIDAASFKFQ 283

Query: 265 LYSHGV-FDEYCGHQ-LNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            YSHGV +D  C  + L+HGV  VGY     G++Y++VKNSW   WG+ GYI M+R   +
Sbjct: 284 FYSHGVYYDRSCSPEYLDHGVLAVGYNSTKDGKQYYIVKNSWSEDWGDDGYILMSRRKNN 343

Query: 322 SNIGICGILMQASYP 336
           +    CGI   ASYP
Sbjct: 344 N----CGIATMASYP 354


>gi|357130488|ref|XP_003566880.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 356

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 180/320 (56%), Gaps = 47/320 (14%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEEFI 119
           R E W+ ++ R Y    E  RR  ++ +N +Y+D +N + N ++ L  NKF+DL+++EF+
Sbjct: 38  RHEEWMAKFGRVYTDAQEKARRQEVFGANARYVDAVNRAGNRTYTLGLNKFSDLTDDEFV 97

Query: 120 STYLGYN-------KPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCW 167
            T+LGY        +P  E     V  LG     +P SVDWR +GAVT VK+QG CG CW
Sbjct: 98  QTHLGYRGHQQGGLRP-EEENVSKVAALGYGQADMPESVDWRAQGAVTGVKNQGSCGCCW 156

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG----CNGGYMEKAFEFITKIGG 223
           AF+AVAA EG+ K+ TG L+S+SEQ+++DC   S   G    C+GG+++ A  ++    G
Sbjct: 157 AFAAVAATEGLVKIATGNLISMSEQQVLDCTGQSPGMGNTNTCDGGHIDDALRYVAASRG 216

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHA--------VTITGYE--------------AIPARY 261
           +  E  Y Y G    CQ+  T + A        VT+ G E              ++ A  
Sbjct: 217 LQPEAAYAYTGLQGACQSGFTPNSAASFGEPQTVTLQGDEGRLQGLVAGQPIAVSVEASD 276

Query: 262 AFQLYSHGVF---DEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMAR 317
            F+ Y  GVF      CG +LNH VTVVGYG  D G++YWLVKN WGTSWGE GY+R+AR
Sbjct: 277 DFRHYMSGVFTAGTSSCGQRLNHAVTVVGYGSADGGQEYWLVKNQWGTSWGEGGYMRIAR 336

Query: 318 NSPSSNIGICGILMQASYPV 337
            + + N   CGI   A YP 
Sbjct: 337 GNGAPN---CGISAYAYYPT 353


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 181/314 (57%), Gaps = 38/314 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFAD 112
           S+ +++ ++  ++ R Y S  E + R  ++  N Q+ID  N++     ++F L  N+F D
Sbjct: 19  SLRQQWRDFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 78

Query: 113 LSNEEFISTYLGY-NKPYNEPR--WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           +++EEF +T  G+ N P   P     +     LP  VDWR +GAVTPVKDQ QCGSCWAF
Sbjct: 79  MTSEEFTATMNGFLNVPSRRPTAILRADPDETLPKEVDWRTKGAVTPVKDQKQCGSCWAF 138

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           S   ++EG + LK GKLVSLSEQ LVDC     N GC GG M++AF +I    G+ TED 
Sbjct: 139 STTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDS 198

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLY 266
           YPY  ++ +C+ D +   A T TGY  +                        ++ +FQ Y
Sbjct: 199 YPYEAQDGKCRFDASNVGA-TDTGYVDVEHGSESALKKAVATIGPISVAIDASQPSFQFY 257

Query: 267 SHGV-FDEYCGH-QLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
             GV ++E C    L+HGV  VGYGE + GE YWLVKNSW TSWG  GYI+M+R+  ++ 
Sbjct: 258 HDGVYYEEGCSSTMLDHGVLAVGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDKKNN- 316

Query: 324 IGICGILMQASYPV 337
              CGI  QASYP+
Sbjct: 317 ---CGIASQASYPL 327


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/354 (39%), Positives = 186/354 (52%), Gaps = 57/354 (16%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           + LFLL V  + A      +        ++E +  +  Q+ ++Y SE E + R  IY  N
Sbjct: 1   MKLFLLLVSFLAAANAVSIF------NLVKEEWNAFKLQHRKKYDSESEERIRMKIYVQN 54

Query: 90  VQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKP---------------YN 130
              I   N +       F+L  NK+ADL +EEF+ T  G+N+                  
Sbjct: 55  KHKIAKHNQRYDLGQEKFRLRVNKYADLLHEEFVHTLNGFNRSAAAGSKLLGREQLMTIE 114

Query: 131 EP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
           EP  W     + +P ++DWR++GAVTPVKDQG CGSCW+FSA  A+EG +  KTGKLVSL
Sbjct: 115 EPITWIEPANVDVPTTIDWREKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSL 174

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ LVDC     N GCNGG M+ AF+++    G+ TE  YPY   +D C  +  K    
Sbjct: 175 SEQNLVDCSTKYGNNGCNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDECHYN-PKAIGA 233

Query: 250 TITGYEAIP-----------------------ARYAFQLYSHGVFDE-YC-GHQLNHGVT 284
           T  G+  IP                       +  +FQ YS GV+ E  C   QL+HGV 
Sbjct: 234 TDKGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVL 293

Query: 285 VVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            VGYG  + GE YWLVKNSWGT+WG+ GY++MARN  +     CGI   ASYP+
Sbjct: 294 AVGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRENH----CGIATTASYPL 343


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/300 (42%), Positives = 169/300 (56%), Gaps = 33/300 (11%)

Query: 65  WLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF--ISTY 122
           W   +++ Y  + E   R+ I+  N + I   N Q   F L  N+F D++N EF   + Y
Sbjct: 30  WKMAHNKAYSHDGEETVRYTIWKDNERRIREHNLQGGDFLLEMNQFGDMTNNEFKDFNGY 89

Query: 123 LGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
           L + K  +   + +      P SVDWR EG VTPVKDQGQCGSCWAFS   ++EG N  K
Sbjct: 90  LSH-KHVSGSTFLTPNSFVAPDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQNFKK 148

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TGKLVSLSEQ LVDC     N GCNGG M+ AF +I +  G+ +E  YPY  K+ +C   
Sbjct: 149 TGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDGKCAFT 208

Query: 243 KTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDEY--CGH 277
           K  + A T TG+  IP                       + ++FQ Y  GV++E      
Sbjct: 209 K-PNVAATDTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQFYRKGVYNERKCSST 267

Query: 278 QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +L+HGV VVGYG + G+ YWLVKNSW TSWG+ GYI+M+RN+ +     CGI   ASYP+
Sbjct: 268 ELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQ----CGIATNASYPL 323


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 37/313 (11%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFAD 112
           S+ ++++N+  ++ R Y S  E + R  ++  N Q+ID  N++     ++F L  N+F D
Sbjct: 18  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 77

Query: 113 LSNEEFISTYLGY-NKPYNEPRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +++EE ++T  G+   P   P          LP  VDWR +GAVTPVKDQ QCGSCWAFS
Sbjct: 78  MTSEEIVATMNGFLGAPTRRPAAVLKADDETLPEKVDWRTKGAVTPVKDQKQCGSCWAFS 137

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
              ++EG + LK GKLVSLSEQ LVDC     N GC GG M++AF +I    G+ TED Y
Sbjct: 138 TTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSY 197

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYS 267
           PY  ++ +C+ D +   A T TGY  +                        ++  F  Y 
Sbjct: 198 PYEAQDGKCRFDASNVGA-TDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYH 256

Query: 268 HGVF-DEYCGH-QLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
            GV+ D++C    L+HGV  VGYG D +G  +WLVKNSW TSWG+ GYI+M+RN  ++  
Sbjct: 257 TGVYHDDHCSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNN-- 314

Query: 325 GICGILMQASYPV 337
             CGI  QASYP+
Sbjct: 315 --CGIASQASYPL 325


>gi|30690594|ref|NP_564321.2| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|28393492|gb|AAO42167.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332192920|gb|AEE31041.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 179/316 (56%), Gaps = 40/316 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           + E  + W+ ++SR Y  E E Q RF ++  N+++I+  N + + ++KL  N+FAD + E
Sbjct: 43  VAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTRE 102

Query: 117 EFISTYLGYNK----PYNE------PRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EFI+T+ G       P +E      P W  +V  +    + DWR EGAVTPVK QGQCG 
Sbjct: 103 EFIATHTGLKGVNGIPSSEFVDEMIPSWNWNVSDVAGRETKDWRYEGAVTPVKYQGQCGC 162

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS+VAAVEG+ K+    LVSLSEQ+L+DCD   +N GCNGG M  AF +I K  G+ 
Sbjct: 163 CWAFSSVAAVEGLTKIVGNNLVSLSEQQLLDCDRERDN-GCNGGIMSDAFSYIIKNRGIA 221

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------AF 263
           +E  YPY+     C+ +     +  I G++ +P+                         F
Sbjct: 222 SEASYPYQAAEGTCRYNGKP--SAWIRGFQTVPSNNERALLEAVSKQPVSVSIDADGPGF 279

Query: 264 QLYSHGVFDE-YCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
             YS GV+DE YCG  +NH VT VGYG    G KYWL KNSWG +WGE GYIR+ R+   
Sbjct: 280 MHYSGGVYDEPYCGTNVNHAVTFVGYGTSPEGIKYWLAKNSWGETWGENGYIRIRRDVAW 339

Query: 322 SNIGICGILMQASYPV 337
              G+CG+   A YPV
Sbjct: 340 PQ-GMCGVAQYAFYPV 354


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/350 (40%), Positives = 186/350 (53%), Gaps = 55/350 (15%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FL+ +LG  A A +    +      ++E +  +  Q+ ++Y SE E + R  IY  N   
Sbjct: 4   FLILILGFVAAANAISIFE-----LVKEEWTAFKLQHRKKYDSETEERIRMKIYVQNKHK 58

Query: 93  IDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN--------------KPYNEP-R 133
           I   N +       F+L  NK+ADL +EEF+ T  G+N              KP  EP  
Sbjct: 59  IAKHNQRYDLGQEKFRLRVNKYADLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVT 118

Query: 134 WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           W     + +P ++DWR +GAVT VKDQG CGSCW+FSA  A+EG +  KTGKLVSLSEQ 
Sbjct: 119 WIEPANVDVPTAMDWRTKGAVTQVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQN 178

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LVDC     N GCNGG M+ AF++I    G+ TE  YPY   +D C  +  K    T  G
Sbjct: 179 LVDCSQKYGNNGCNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDECHYN-PKAVGATDKG 237

Query: 254 YEAIP-----------------------ARYAFQLYSHGVFDE-YC-GHQLNHGVTVVGY 288
           +  IP                       +  +FQ YS GV+ E  C   QL+HGV  VGY
Sbjct: 238 FVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGY 297

Query: 289 G-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  + GE YWLVKNSWGT+WG+ GY++MARN  +     CGI   ASYP+
Sbjct: 298 GTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRDNH----CGIATTASYPL 343


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 184/320 (57%), Gaps = 51/320 (15%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYID---YINSQ-NLSFKLTDNKFADLS 114
           E+ ++++   + R YG  +E QR+  ++ +N++ I+   Y++SQ   S+++  N+FAD+ 
Sbjct: 41  EKLWQDFKTVHERNYGETEEMQRK-EVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADME 99

Query: 115 NEEFISTYLGY------------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
            +EF S   G+            +  Y  P  P    + LPA VDWRKEG VTP+KDQG 
Sbjct: 100 VKEFASVVNGFRMNNRTKVRDHLHSHYISPAIP----VSLPAEVDWRKEGYVTPIKDQGH 155

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCW+FS   A+EG +  KTGKLVSLSEQ L+DC  +  N GCNGG M+ AF++I    
Sbjct: 156 CGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCSTSYGNNGCNGGVMDYAFQYIKDND 215

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G  TED YPY   +  C+  K ++   T TGY  +P                       +
Sbjct: 216 GDDTEDSYPYEAADGPCRF-KKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDAS 274

Query: 260 RYAFQLYSHGVFDEY-CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ+Y  GV+DE  C  + L+HGV VVGYG + G+ YWLVKNSWGT WG+ GYI+M+R
Sbjct: 275 HTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTELGQDYWLVKNSWGTKWGDEGYIKMSR 334

Query: 318 NSPSSNIGICGILMQASYPV 337
           N  +     CGI   ASYP+
Sbjct: 335 NKNNQ----CGISSMASYPL 350


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 178/313 (56%), Gaps = 39/313 (12%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           + F  + K + +EY +E E   R  I+  N + I+  NS+     +SFKL  N  AD+  
Sbjct: 25  DEFTLFKKFHRKEYDNELEESYRKKIFLENKKRIEKHNSRYKQGKVSFKLKLNHLADMLI 84

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLGLPAS-------VDWRKEGAVTPVKDQGQCGSCWA 168
            E+   YLG+NK           Y  +P +       VDWR +GAVTPVK+QG CGSCWA
Sbjct: 85  HEYSDVYLGFNKSSKANNNKLQSYTFIPPAHVTLNKEVDWRTKGAVTPVKNQGHCGSCWA 144

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   A+EG N  KTGKLVSLSEQ LVDC  +  N GC GG M+ AF++I +  G+ TE 
Sbjct: 145 FSTTGALEGQNFRKTGKLVSLSEQNLVDCSGSYGNNGCEGGLMDNAFQYIKENHGIDTEK 204

Query: 229 DYPYRGKNDRCQTDKTKHHA-----VTIT-GYE---------------AIPARY-AFQLY 266
            YPY G+++ C+  KT   A     V IT G E               AI A + +FQ Y
Sbjct: 205 SYPYEGEDETCRFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAIDASHQSFQFY 264

Query: 267 SHGVF--DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           S GV+   E     L+HGV VVGYG +  +KYWLVKNSWGT WG+ GYI+MAR+  ++  
Sbjct: 265 SEGVYYEPECSSENLDHGVLVVGYGVEDNQKYWLVKNSWGTQWGDGGYIKMARDQDNN-- 322

Query: 325 GICGILMQASYPV 337
             CGI  QASYP+
Sbjct: 323 --CGIATQASYPL 333


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 178/321 (55%), Gaps = 46/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           ++E +  +  Q+ + Y SE E + R  IY  N   I   N +       ++L  NK+ADL
Sbjct: 23  VKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADL 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQY-----------LGLPASVDWRKEGAVTPVKDQGQ 162
            +EEF+ T  G+N+  ++     V+            + +P +VDWRK+GAVTPVKDQG 
Sbjct: 83  LHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGH 142

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCW+FSA  A+EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF++I   G
Sbjct: 143 CGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQYIKDNG 202

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G+ TE  YPY   +D C  +  K    T  GY  IP                       +
Sbjct: 203 GIDTEKSYPYEAIDDTCHFN-PKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDAS 261

Query: 260 RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMA 316
             +FQ YS GV+ E  C  + L+HGV  VGYG  + GE YWLVKNSWGT+WG+ GY++MA
Sbjct: 262 HESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMA 321

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CG+   ASYP+
Sbjct: 322 RNRDNH----CGVATCASYPL 338


>gi|9502421|gb|AAF88120.1|AC021043_13 Putative cysteine proteinase [Arabidopsis thaliana]
          Length = 331

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 179/316 (56%), Gaps = 40/316 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           + E  + W+ ++SR Y  E E Q RF ++  N+++I+  N + + ++KL  N+FAD + E
Sbjct: 19  VAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTRE 78

Query: 117 EFISTYLGYNK----PYNE------PRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           EFI+T+ G       P +E      P W  +V  +    + DWR EGAVTPVK QGQCG 
Sbjct: 79  EFIATHTGLKGVNGIPSSEFVDEMIPSWNWNVSDVAGRETKDWRYEGAVTPVKYQGQCGC 138

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS+VAAVEG+ K+    LVSLSEQ+L+DCD   +N GCNGG M  AF +I K  G+ 
Sbjct: 139 CWAFSSVAAVEGLTKIVGNNLVSLSEQQLLDCDRERDN-GCNGGIMSDAFSYIIKNRGIA 197

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------AF 263
           +E  YPY+     C+ +     +  I G++ +P+                         F
Sbjct: 198 SEASYPYQAAEGTCRYNGKP--SAWIRGFQTVPSNNERALLEAVSKQPVSVSIDADGPGF 255

Query: 264 QLYSHGVFDE-YCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
             YS GV+DE YCG  +NH VT VGYG    G KYWL KNSWG +WGE GYIR+ R+   
Sbjct: 256 MHYSGGVYDEPYCGTNVNHAVTFVGYGTSPEGIKYWLAKNSWGETWGENGYIRIRRDVAW 315

Query: 322 SNIGICGILMQASYPV 337
              G+CG+   A YPV
Sbjct: 316 PQ-GMCGVAQYAFYPV 330


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 195/373 (52%), Gaps = 67/373 (17%)

Query: 19  IDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDE 78
           I +++M R   + L +  ++ I            +  +  +  FENW+ ++ ++Y    E
Sbjct: 145 IFLKIMNRYINILLLIFGLIAISNALL-------FSEEQYKNEFENWIDRFEKKYDVS-E 196

Query: 79  WQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNK------PYNEP 132
           +++RF I+ SN+ ++   NS+N    L  N  ADL+N E+   YLG +K      P N  
Sbjct: 197 FKKRFSIFKSNMDFVHSWNSKNSQTVLGLNHLADLTNLEYRQFYLGTHKKAVLGTPGNHE 256

Query: 133 RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQ 192
                   G  A+VDWR++GAV+P+KDQGQCGSCW+FS   +VEG +++K+G +V LSEQ
Sbjct: 257 VSNLQSVFGDSATVDWRQKGAVSPIKDQGQCGSCWSFSTTGSVEGAHQIKSGNMVELSEQ 316

Query: 193 ELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTKHHAVTI 251
            LVDC  +  N GCNGG M+ AFE+I    G+ TE  YPY   +   C+ +K    A TI
Sbjct: 317 NLVDCSTSEGNMGCNGGLMDYAFEYIITNNGIDTESSYPYTASSGTTCKYNKANSGA-TI 375

Query: 252 TGYEAIPA-----------------------RYAFQLYSHGV-FDEYCGH-QLNHGVTVV 286
           + Y+ I A                         +FQLYSHG+ +D  C    L+HGV VV
Sbjct: 376 SSYKNITAGSESDLADAVKNAGPVSVAIDASHNSFQLYSHGIYYDASCSSVNLDHGVLVV 435

Query: 287 GYGE----------------------DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           GYG                       D  + YW+VKNSWGTSWG+ G+I M+++  ++  
Sbjct: 436 GYGSGTPDSDSRVHKGSQVRVKVPKTDDTKNYWIVKNSWGTSWGDKGFIYMSKDRDNN-- 493

Query: 325 GICGILMQASYPV 337
             CGI   ASYP+
Sbjct: 494 --CGIASCASYPI 504


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/323 (41%), Positives = 178/323 (55%), Gaps = 48/323 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           + E +  +  ++S+ Y SE E + R  IY  N   I   N +     +S+KL  NK+AD+
Sbjct: 23  VREEWSAFKLEHSKRYDSEVEDKFRMKIYLENKHRIAKHNQRFEQGAVSYKLRPNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPR-------------WPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            + EF+    G+NK    P+             + +  ++  P  VDWRK+GAVT VKDQ
Sbjct: 83  LSHEFVHVMNGFNKTLKHPKAVHGKGRESRPATFIAPAHVTYPDHVDWRKKGAVTEVKDQ 142

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCWAFS   A+EG +  KTG LVSLSEQ L+DC     N GCNGG M+ AF++I  
Sbjct: 143 GKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNGCNGGLMDNAFKYIKD 202

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------- 258
            GG+ TE  YPY G +D+C+ +  K+      G+  IP                      
Sbjct: 203 NGGIDTEKAYPYEGVDDKCRYN-AKNSGADDVGFVDIPQGDEEKLMQAVATVGPVSVAID 261

Query: 259 -ARYAFQLYSHGV-FDEYCGH-QLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIR 314
            ++ +FQ YS GV +DE C    L+HGV VVGYG D  G  YWLVKNSWG +WG+ GYI+
Sbjct: 262 ASQESFQFYSDGVYYDENCSSTDLDHGVMVVGYGTDEQGGDYWLVKNSWGRTWGDLGYIK 321

Query: 315 MARNSPSSNIGICGILMQASYPV 337
           MARN  +     CGI   ASYP+
Sbjct: 322 MARNKNNH----CGIASSASYPL 340


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 183/338 (54%), Gaps = 44/338 (13%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A L+  L+ VL            Q +   S + ++  W   + + Y  E+E  RR  I++
Sbjct: 3   AFLACLLVAVL----------IAQCFSELSQDRQWHAWKDFHGKTYTGEEEDLRR-AIWN 51

Query: 88  SNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE---PRWPSVQYLGLPA 144
            N++ +   N++N S+KL  N FADL+  EF   ++GY    N      +  +  + LPA
Sbjct: 52  DNLEIVKKHNAENHSYKLDMNHFADLTVTEFKQRFMGYRAASNSTGGSTFLPLSNVQLPA 111

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQ 204
            VDWR +G VT VK+QGQCGSCWAFS+  ++EG +  KTGKLVSLSEQ LVDC     N 
Sbjct: 112 EVDWRDKGFVTAVKNQGQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNN 171

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE--------- 255
           GC GG M+ AF++I    G+ TE  YPY  ++ +C   K      T+TGY          
Sbjct: 172 GCEGGLMDYAFKYIKNNDGIDTEQSYPYTARDGQCHF-KPGSVGATVTGYTDVQRGSEGD 230

Query: 256 -------------AIPARY-AFQLYSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLV 299
                        AI A + +FQLY  GV+ E      QL+HGV  VGYG + G+ YWLV
Sbjct: 231 LQSAVATVGPISVAIDAGHSSFQLYKTGVYSEPDCSSTQLDHGVLAVGYGAEDGKDYWLV 290

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWG  WG  GYI+M+RN  +     CGI  QASYP+
Sbjct: 291 KNSWGEGWGMNGYIKMSRNKDNQ----CGIATQASYPL 324


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 181/319 (56%), Gaps = 44/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDNKFADL 113
           ++E++  +   + ++Y SE E + R  I+  N   +   N   +Q L SFKL  NK++D+
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 114 SNEEFISTYLGYNKPYNEPRW----PSVQYLG-----LPASVDWRKEGAVTPVKDQGQCG 164
            N EF+ T  GYN+     R      S+ ++      LP  +DWRK GAVTPVKDQGQCG
Sbjct: 83  LNHEFVHTLNGYNRSKTPLRSGELDESITFIPPANVELPKQIDWRKLGAVTPVKDQGQCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FS   ++EG +  K+ KLVSLSEQ L+DC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKDNGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGY--------EAIPARYA-------------- 262
            TE  YPY+ ++++C   K ++   T  G+        E + A  A              
Sbjct: 203 DTEQSYPYKAEDEKCHY-KPRNKGATDRGFVDIESGDEEKLKAAVATVGPISVAIDASHP 261

Query: 263 -FQLYSHGVF--DEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
            FQ YS GV+   E    QL+HGV VVGYG D  G  YWLVKNSWG SWG+ GYI+MARN
Sbjct: 262 TFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQGYIKMARN 321

Query: 319 SPSSNIGICGILMQASYPV 337
             ++    CGI  QASYP+
Sbjct: 322 RDNN----CGIATQASYPL 336


>gi|113120269|gb|ABI30274.1| VS-B, partial [Vasconcellea stipulata]
          Length = 341

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 178/318 (55%), Gaps = 41/318 (12%)

Query: 38  LGIPAGAWS-EGYPQKYDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
           LG+ +  +S  GY Q  D  S+E     FE+W+ ++ + Y + DE   RF  +  N+ YI
Sbjct: 21  LGLSSADFSIVGYSQD-DLTSIESSIRLFESWMLKHDKVYKTIDEKIYRFETFKDNLMYI 79

Query: 94  DYINSQNLSFKLTDNKFADLSNEEFISTYLG-------YNKPYNEPRWPSVQYLGLPASV 146
           D  N +N S+ L  N+FADL+++EF   Y+G         +  ++  +P+   +  P S+
Sbjct: 80  DETNKKNNSYWLGLNEFADLTHDEFKEKYVGSIPEDSMIIEQSDDVEFPNKHVVDYPESI 139

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWR++GAVTPVK+Q  CGSCWAFS VA VEGINK+ TG L+SLSEQEL+DCD  S   GC
Sbjct: 140 DWRQKGAVTPVKNQNPCGSCWAFSTVATVEGINKIVTGNLISLSEQELLDCDRRS--HGC 197

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------ 260
            GGY   + +++    GV TE +YPY  K   C+    K   V I GY+ +P+       
Sbjct: 198 KGGYQTTSLKYVVD-NGVHTEKEYPYEKKQGNCRAKNKKGLKVYINGYKRVPSNDEISLI 256

Query: 261 ----------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWG 304
                             FQ Y  GVF   CG +L+H VT VGYG+D    Y L+KNSWG
Sbjct: 257 KTISIQPVSVLVESKGRPFQFYKGGVFGGPCGTKLDHAVTAVGYGKD----YILIKNSWG 312

Query: 305 TSWGEAGYIRMARNSPSS 322
             WG+ GYI++ R S  S
Sbjct: 313 PKWGDKGYIKIKRASGQS 330


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/293 (45%), Positives = 172/293 (58%), Gaps = 37/293 (12%)

Query: 76  EDEWQRRFGIYSSNVQYIDYINSQNLS---FKLTDNKFADLSNEEFISTYLGY---NKPY 129
           ++E  RRF I+  N+  I+  N  N S   F L  N+FAD++N EF +  LG    NK  
Sbjct: 43  QEELIRRF-IFEDNLHTIEEFNRVNASLAGFTLGVNEFADMTNTEFSNMLLGLGGRNKIA 101

Query: 130 NEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
            +  + S     LPA VDW ++G VT VK+QGQCGSCWAFS   ++EG    KTGKLVSL
Sbjct: 102 GDSVFESSHVQDLPAEVDWTQKGYVTEVKNQGQCGSCWAFSTTGSLEGQVFKKTGKLVSL 161

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ LVDC  +  NQGCNGG M++AF +I K GG+ TE  YPY G +  C+  + K  A 
Sbjct: 162 SEQNLVDCSTSEGNQGCNGGLMDQAFTYIKKNGGIDTEAAYPYTGSDGTCRFLENKVGA- 220

Query: 250 TITGY------------EAI----PARYA-------FQLYSHGVFDE-YCGH-QLNHGVT 284
           T++G+            EA+    P   A       FQ Y  GV++  +C   +L+HGV 
Sbjct: 221 TVSGFVDVKSGDENALKEAVATVGPISVAIDASSIFFQFYRGGVYNPWFCSSTELDHGVL 280

Query: 285 VVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VVGYG + G+ YWLVKNSWG+SWG  GYI+M RN  +     CGI  QASYP 
Sbjct: 281 VVGYGTEGGKDYWLVKNSWGSSWGLKGYIKMVRNKKNR----CGIATQASYPT 329


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 178/321 (55%), Gaps = 46/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           ++E +  +  Q+ + Y SE E + R  IY  N   I   N +       ++L  NK+ADL
Sbjct: 23  VKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADL 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQY-----------LGLPASVDWRKEGAVTPVKDQGQ 162
            +EEF+ T  G+N+  ++     V+            + +P +VDWRK+GAVTPVKDQG 
Sbjct: 83  LHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGH 142

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCW+FSA  A+EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF++I   G
Sbjct: 143 CGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQYIKDNG 202

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G+ TE  YPY   +D C  +  K    T  GY  IP                       +
Sbjct: 203 GIDTEKSYPYEAIDDTCHFN-PKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDAS 261

Query: 260 RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMA 316
             +FQ YS GV+ E  C  + L+HGV  VGYG  + GE YWLVKNSWGT+WG+ GY++MA
Sbjct: 262 HESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMA 321

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CG+   ASYP+
Sbjct: 322 RNHDNH----CGVATCASYPL 338


>gi|146216002|gb|ABQ10203.1| cysteine protease Cp5 [Actinidia deliciosa]
          Length = 509

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 177/320 (55%), Gaps = 43/320 (13%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS---FKLTDNKFADLSNE 116
           E F+ W +++ + Y    E +++F  +  N++Y+   N +  +     +  NKFAD+SNE
Sbjct: 49  ELFKKWTEKHGKVYKHGQEVEKKFQNFRDNLRYVMEKNGERGASGGHLVGLNKFADMSNE 108

Query: 117 EFISTYLG-YNKPYNEPRWPSVQYLGL------------PASVDWRKEGAVTPVKDQGQC 163
           EF   Y+    KP ++      +  G             P S+DWRK G VT VKDQG C
Sbjct: 109 EFREVYVSKVKKPTSKRMAIERRRQGKAAAAKAVAACDGPTSLDWRKYGIVTGVKDQGDC 168

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS+  A+EGIN L  G L+SLSEQELVDCD  S N GC GGYM+ AFE++   GG
Sbjct: 169 GSCWAFSSTGAIEGINALANGDLISLSEQELVDCD--STNDGCEGGYMDYAFEWVMSNGG 226

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA--------------------- 262
           + TE DYPY G++  C T K +  AV+I GYE +    +                     
Sbjct: 227 IDTETDYPYTGEDGTCNTTKEETKAVSIDGYEDVAEEESALFCAVLKQPISVGIDGGAID 286

Query: 263 FQLYSHGVF---DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
           FQLY+ G++          ++H V VVGYG + GE+YW++KNSWGT WG  GY  + RN+
Sbjct: 287 FQLYTGGIYDGDCSDDPDDIDHAVLVVGYGAESGEEYWIIKNSWGTDWGMKGYAYIKRNT 346

Query: 320 PSSNIGICGILMQASYPVKR 339
            S + G+C I   ASYP K 
Sbjct: 347 -SKDYGVCAINAMASYPTKE 365


>gi|359483753|ref|XP_002266308.2| PREDICTED: oryzain alpha chain-like [Vitis vinifera]
          Length = 501

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 171/318 (53%), Gaps = 37/318 (11%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + + E F  W +++ R Y   +E  +RF I+  N++Y+   NS+     L  NKFAD+SN
Sbjct: 40  ERVRELFHLWKERHKRVYKHAEETAKRFEIFKENLKYVIERNSKGHRHTLGMNKFADMSN 99

Query: 116 EEFISTYLGYNKPYNEP-----RWPSVQYLGL-----PASVDWRKEGAVTPVKDQGQCGS 165
           EEF   YL   K          R    Q  G      P+S+DWRK+G VT +KDQG CGS
Sbjct: 100 EEFKEKYLSKIKKPINKKNNYLRRSMQQKKGTASCEAPSSLDWRKKGVVTGIKDQGDCGS 159

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS+  A+EGIN + TG L+SLSEQELVDCD    N GC GGYM+ AFE++   GG+ 
Sbjct: 160 CWAFSSTGAMEGINAIVTGDLISLSEQELVDCDTT--NYGCEGGYMDYAFEWVISNGGID 217

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------ARYAFQ 264
           +E DYPY G +  C T K     V+I GY+ +                      +   FQ
Sbjct: 218 SESDYPYTGTDGTCNTTKEDTKVVSIDGYKDVDESDSALLCAAVNQPISVGMDGSALDFQ 277

Query: 265 LYSHGVF---DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           LY+ G++          ++H V +VGYG +  E YW+ KNSWGTSWG  GY  + RN+  
Sbjct: 278 LYTSGIYAGDCSDDPDDIDHAVLIVGYGSEDSEDYWICKNSWGTSWGMEGYFYIKRNTDL 337

Query: 322 SNIGICGILMQASYPVKR 339
              G C I   ASYP K 
Sbjct: 338 P-YGECAINAMASYPTKE 354


>gi|358345461|ref|XP_003636796.1| Cysteine proteinase [Medicago truncatula]
 gi|355502731|gb|AES83934.1| Cysteine proteinase [Medicago truncatula]
          Length = 475

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/338 (38%), Positives = 183/338 (54%), Gaps = 42/338 (12%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKYDP--QSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           SL  L   GIP+      +     P  + + E F+ W K++ + Y   +E   R   +  
Sbjct: 18  SLTFLSCYGIPSEYSILAFDLNKFPSEEQVVELFQQWKKEHQKFYIHPEEAALRLENFKR 77

Query: 89  NVQYI---DYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPAS 145
           N++YI   + + +  +   L  N+FAD+SNEEF + ++   +  ++           P S
Sbjct: 78  NLKYIVERNAMRNSPVGHHLGLNRFADMSNEEFKNKFISKVESCDDA----------PYS 127

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           +DWRK+G VT VKDQG CGSCW+FS+  A+EG+N + TG L+SLSEQELVDCD  + N G
Sbjct: 128 LDWRKKGVVTGVKDQGNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCD--TTNDG 185

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           C GGYM+ AFE++   GG+ TE DYPY G    C   K +   VTI GY  +        
Sbjct: 186 CEGGYMDYAFEWVINNGGIDTEADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALF 245

Query: 259 --------------ARYAFQLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKN 301
                         +   FQLY+ G++D  C      ++H V +VGYG D  + YW+VKN
Sbjct: 246 CATVKQPISVGIDGSTLDFQLYTGGIYDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKN 305

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           SWGTSWG  G+I + RN+ +   G+C I   AS+P K 
Sbjct: 306 SWGTSWGIEGFIYIRRNT-NLKYGVCAINYMASFPTKE 342


>gi|255635645|gb|ACU18172.1| unknown [Glycine max]
          Length = 355

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/298 (42%), Positives = 176/298 (59%), Gaps = 34/298 (11%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           FE WL ++ + Y +  E ++RF I+ +N+++ID  NS N ++KL  N FADL+N E+ + 
Sbjct: 45  FEEWLVKHDKVYNALGEKEKRFQIFKNNLRFIDERNSLNRTYKLGLNVFADLTNAEYRAM 104

Query: 122 YLGY--NKPY----NEPRWPSVQYLG--LPASVDWRKEGAVTPVKDQG-QCGSCWAFSAV 172
           YL    + P       PR   V  +G  +P SVDWRKEGAVTPVK+QG  C SCWAF+AV
Sbjct: 105 YLRTWDDGPRLDLDTPPRNRYVPRVGDTIPKSVDWRKEGAVTPVKNQGATCNSCWAFTAV 164

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            AVE + K+KTG L+SLSEQE+VDC   S ++GC GG ++  + +I K  G++ E DYPY
Sbjct: 165 GAVESLVKIKTGDLISLSEQEVVDC-TTSSSRGCGGGDIQHGYIYIRK-NGISLEKDYPY 222

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGV 270
           RG   +C ++K K+  VTI G+  +P +                      Y FQ Y+ GV
Sbjct: 223 RGDEGKCDSNK-KNAIVTIDGHGWVPTQLEEALKQGIANQPVAVPIPADDYEFQYYTSGV 281

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           F   CG +LNH + +VGYG +    YW+ KNS+   WGE GYIR+ R   +   G  G
Sbjct: 282 FKGKCGTELNHALLLVGYGAEKDGDYWIAKNSYSDKWGENGYIRIQRKLSTCKFGNGG 339


>gi|66735056|gb|AAY53767.1| cysteine protease [Saprolegnia parasitica]
          Length = 523

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 176/312 (56%), Gaps = 35/312 (11%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSN 115
           S E +F +W+K+++ +  +  EW  RF ++  N Q I+  N   + SF +  N+++ L+ 
Sbjct: 23  SYEAKFLSWMKKFAVKL-NPLEWVHRFEVFILNDQRIEAHNKDASSSFTMGHNEYSHLTF 81

Query: 116 EEF--ISTYLGYNKPYNEPRW------PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +EF  + T L  +  Y + R       P+V    +P  +DW ++G VTPVK+QG CGSCW
Sbjct: 82  DEFKKLRTGLRVSPSYIQSRAKYALMAPAVNMTDVPNEMDWVEQGGVTPVKNQGMCGSCW 141

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   A+EG   + + +LVS+SEQELVDCD N +  GCNGG M+ AF+++    G+  E
Sbjct: 142 AFSTTGAIEGAAFVSSKQLVSVSEQELVDCDHNGD-MGCNGGLMDNAFKWVKTHKGLCKE 200

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQL 265
           +DYPY  K   C   K K     +T +  +PA                      +  FQ 
Sbjct: 201 EDYPYHAKEGTCALKKCKP-VTKVTAFHDVPANDEQALKAAVAKQPVSVAIEADQPEFQF 259

Query: 266 YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
           Y  GVFD+ CG +L+HGV VVGYGE+ G+KYW VKNSWG  WG+ GYI++AR       G
Sbjct: 260 YKSGVFDKSCGTKLDHGVLVVGYGEEGGKKYWKVKNSWGADWGDKGYIKLAREF-GPETG 318

Query: 326 ICGILMQASYPV 337
            CG+ M  SYP 
Sbjct: 319 QCGVAMVPSYPT 330


>gi|326503122|dbj|BAJ99186.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512552|dbj|BAJ99631.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 182/332 (54%), Gaps = 58/332 (17%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           M  RF  W+   +R Y +  E   RF +Y SN++YI+ +N++      +++L +  F DL
Sbjct: 56  MMARFHVWMTVQNRSYPTSSEKAHRFKVYRSNMRYIEALNAEATTSGFTYELGEGPFTDL 115

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQ------------------------YLGLPASVDWR 149
           ++EEFIS Y G   P ++ R   V                           G P  +DWR
Sbjct: 116 TDEEFISLYTG-KIPDDDHREDGVHDEQIITTHAGSVNGAEGVTVYANFSAGAPIRMDWR 174

Query: 150 KEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGG 209
           K GAVTPVKDQG+CGSCWAF  VA +EGI+K+K G+LVSLSEQ+LVDCD    + GCNGG
Sbjct: 175 KRGAVTPVKDQGKCGSCWAFPTVATIEGIHKIKRGRLVSLSEQQLVDCDF--LDGGCNGG 232

Query: 210 YMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY-------- 261
           +   AF++I + GG+TT   Y Y+    +C+ ++    A  ITGY  + +          
Sbjct: 233 WPRNAFQWIIQNGGITTTSSYTYKAAEGQCKGNRKP--AAKITGYRKVKSNSEVSMVNIV 290

Query: 262 --------------AFQLYSHGVFDEYCG-HQLNHGVTVVGYGED-HGEKYWLVKNSWGT 305
                          FQ Y  G+++  C   +LNH +T+VGYG+  +G KYW+VKNSWG 
Sbjct: 291 ANQPIAASIVVHGGQFQHYKGGIYNGPCATSKLNHVITIVGYGQQAYGAKYWIVKNSWGA 350

Query: 306 SWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +WG  GY+ M R + +  +G CGI ++  +P+
Sbjct: 351 AWGNKGYMLMKRGTKNP-LGQCGIAVRPIFPL 381


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 178/322 (55%), Gaps = 47/322 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           ++E +  +  Q+ ++Y SE E + R  IY  N   I   N +       F+L  NK+ DL
Sbjct: 23  VKEEWNAYKLQHRKKYDSETEERLRLKIYVQNKHKIAKHNQRFEQGQEKFRLRVNKYTDL 82

Query: 114 SNEEFISTYLGYNKP-YNEPRWPSVQY-----------LGLPASVDWRKEGAVTPVKDQG 161
            +EEF+ T  G+N+    +P    V+            + +P +VDWR++GAVTPVKDQG
Sbjct: 83  LHEEFVQTLNGFNRTNAKKPMLKGVKIDEPVTYIEPANVEVPKTVDWREKGAVTPVKDQG 142

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCW+FSA  A+EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF++I   
Sbjct: 143 HCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGMMDFAFQYIKDN 202

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------- 258
           GG+ TE  YPY   +D C  +  K    T  G+  IP                       
Sbjct: 203 GGIDTEKAYPYEAIDDTCHYN-PKAVGATDKGFVDIPQGDEKALMKAIATAGPVSVAIDA 261

Query: 259 ARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRM 315
           +  +FQ YS GV+ E  C  + L+HGV  VGYG  + GE YWLVKNSWGT+WG+ GY++M
Sbjct: 262 SHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKM 321

Query: 316 ARNSPSSNIGICGILMQASYPV 337
           ARN  +     CGI   ASYP+
Sbjct: 322 ARNRDNH----CGIATAASYPL 339


>gi|82796372|gb|ABB91778.1| cathepsin L [Hymeniacidon perlevis]
          Length = 323

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 178/314 (56%), Gaps = 41/314 (13%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDY--INSQNLSFKLTDNKFADLS 114
           S  + +E+W  +++++Y  + E   R+ I+  N + I+    NS    F L  NKF DL 
Sbjct: 17  SFSQDWEDWKNEHNKKYSDDLEELTRYKIWQGNQKIIEVHNANSDKFGFTLGMNKFGDLE 76

Query: 115 NEEFISTYLGYNKPYNEPRWPSVQ-YLGLP-----ASVDWRKEGAVTPVKDQGQCGSCWA 168
           + EF   + GY     + R  S + ++  P      +VDWR +GAVT VK+QGQCGSCWA
Sbjct: 77  SHEFAEMFNGY---MMQARSNSTKVFVADPNYKADPTVDWRTKGAVTGVKNQGQCGSCWA 133

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FS   ++EG + LKTGKLVSLSEQ LVDC     N+GCNGG M++AFE+I K GG+ TE 
Sbjct: 134 FSTTGSLEGQHFLKTGKLVSLSEQNLVDCSGKEGNEGCNGGLMDQAFEYIKKNGGIDTEA 193

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY-AFQL 265
            YPY+  ++RC+  K      T TGY                       AI A + +FQL
Sbjct: 194 SYPYQAHDERCRF-KASDVGATCTGYVDIKREDENALMQAVEKIGPVSVAIDASHSSFQL 252

Query: 266 YSHGVFDEYCGHQ--LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Y  GV+ E    Q  L+HGV  +GYG + G  YWLVKNSWGT WG  GYI M+RN  ++ 
Sbjct: 253 YRSGVYYERECSQTALDHGVLAIGYGTEGGSDYWLVKNSWGTDWGMEGYIMMSRNRNNN- 311

Query: 324 IGICGILMQASYPV 337
              CGI  +ASYP 
Sbjct: 312 ---CGIATEASYPT 322


>gi|403368476|gb|EJY84073.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 191/315 (60%), Gaps = 34/315 (10%)

Query: 51  QKYDPQSMEER-FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDN 108
           Q Y P + E+  F N++ +Y + YG+++E+  R  ++  N+  +   N +N ++++L  N
Sbjct: 31  QLYTPITPEDHAFTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNVRNDVTYRLGLN 90

Query: 109 KFADLSNEEFISTYLGYNKPYNE-PRWPSVQYLGLPAS--VDWRKEGAVTPVKDQGQCGS 165
           KFAD +  E+    LG+    N+ PR  +++ LG P +  V+W ++GAVTPVKDQGQCGS
Sbjct: 91  KFADYTEAEY-KRLLGFGGQKNKNPR--NIKVLGAPKNDGVNWVEQGAVTPVKDQGQCGS 147

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CW+FSA  A+EG  K++ G L SLSEQ+LVDC     N+GC GG+M++AF+++ +   + 
Sbjct: 148 CWSFSATGAMEGHAKIQFGTLYSLSEQQLVDCSQAEGNEGCGGGWMDQAFQYVEQT-ALE 206

Query: 226 TEDDYPYRGKNDRCQ------------TDKTKHHAVTITGY-------EAIPA-RYAFQL 265
           TED YPY   +D C+             D T ++   +           AI A +  FQ 
Sbjct: 207 TEDQYPYEAVDDTCRASSAGVVKVDSFVDVTPNNVNELKAALDKGPVSVAIEADQMVFQF 266

Query: 266 YSHGVF-DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           YS GV  D  CG  L+HGV  VGYG + G+ Y+LVKNSWG SWGE GY+++A  SP +  
Sbjct: 267 YSGGVINDASCGTTLDHGVLAVGYGNESGQDYFLVKNSWGASWGEEGYVKIAA-SPDN-- 323

Query: 325 GICGILMQASYPVKR 339
            ICGIL QASYP+ +
Sbjct: 324 -ICGILSQASYPIMK 337


>gi|414887427|tpg|DAA63441.1| TPA: hypothetical protein ZEAMMB73_713985 [Zea mays]
          Length = 355

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/335 (39%), Positives = 185/335 (55%), Gaps = 52/335 (15%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           A+L   L+ VL   AGA S G     D   M +RF  W   Y+R Y +  E  RRF +Y 
Sbjct: 9   ALLCACLMLVL--MAGAASGGRVDVED-MLMMDRFRAWQATYNRSYLTAAERLRRFEVYR 65

Query: 88  SNVQYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNK------------------- 127
            N++ I+  N +  LS++L++  F DL++EEF++T+    +                   
Sbjct: 66  QNMELIEATNRRAELSYQLSETPFTDLTSEEFLATHTMSTRLHASEAARRHRELITTHAG 125

Query: 128 PYNE--PRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLK 182
           P ++   +W    Y   L +P SVDWR +GAVT VKDQG CG CW+F+ VAA+EG++K++
Sbjct: 126 PVSDGGRQWNRRNYTTDLDVPESVDWRTKGAVTTVKDQGACGGCWSFATVAAIEGLHKIR 185

Query: 183 TGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 242
           TG+LVSLSEQE++DC  +  N GC+GG    A ++++  GG+TTE DYPY G+  +C+ D
Sbjct: 186 TGQLVSLSEQEVLDCS-SPPNNGCHGGNPAAAIDWVSANGGLTTESDYPYEGRQGKCKLD 244

Query: 243 KTKHHAVTITGYEAI---------------PARYAF------QLYSHGVFDEYCGHQ-LN 280
           K ++H   I G + +               P           Q Y  GVF   C  + LN
Sbjct: 245 KARNHVAKIRGRKLVDQNNEAALEVAVAQQPVAVGMNVHPIQQHYKSGVFHGPCDPEDLN 304

Query: 281 HGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIR 314
           H VT+VGYG E  G KYW+VKNSWG  WGE GY R
Sbjct: 305 HAVTMVGYGAESGGRKYWIVKNSWGEKWGEKGYFR 339


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 180/321 (56%), Gaps = 46/321 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           ++E++  +  Q+ ++Y S+ E + R  I+  N   +   N       +S+KL  NK+AD+
Sbjct: 23  VQEQWGTFKLQHKKQYKSDTEEKFRMKIFMENSHKVAKXNKLYEMGLVSYKLKINKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQ-----------YLGLPASVDWRKEGAVTPVKDQGQ 162
            + EF+ T  G+N+  N P   + +            +  P +VDWR+ GAVT VKDQG 
Sbjct: 83  LHHEFVHTVNGFNRTKNTPLLGTSEDEQGATFIAPANVKFPENVDWREHGAVTXVKDQGH 142

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCW+FSA  A+EG +  KT KLVSLSEQ LVDC     N GCNGG M+ AF+++    
Sbjct: 143 CGSCWSFSATGALEGQHFRKTNKLVSLSEQNLVDCSTKFGNDGCNGGLMDNAFKYVKYNH 202

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------A 259
           G+ TE  YPY   +++C  +  K    T  G+  IP                       +
Sbjct: 203 GIDTEASYPYHADDEKCHYN-PKTSGATDRGFVDIPTGDEEKLMAAVATVGPVSVAIDAS 261

Query: 260 RYAFQLYSHGV-FDEYC-GHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMA 316
             +FQLYS GV +D  C   +L+HGV VVGYG D +G+ YW+VKNSWG SWGE GYI+MA
Sbjct: 262 HESFQLYSEGVYYDPECSSEELDHGVLVVGYGTDENGQDYWIVKNSWGESWGEQGYIKMA 321

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  ++    CGI  QASYP+
Sbjct: 322 RNRDNN----CGIATQASYPL 338


>gi|326531188|dbj|BAK04945.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 181/325 (55%), Gaps = 49/325 (15%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           M +RF  W   +++ Y S +E  RRF +Y  NV+YI+  N + +L+++L +N+FADL+ E
Sbjct: 38  MMDRFLMWQATHNQSYRSAEERLRRFQVYRDNVEYIETTNRRGDLTYQLGENQFADLTRE 97

Query: 117 EFISTYLGYNKPY------------------NEPRWPSV-QYLGL-PASVDWRKEGAVTP 156
           EFI+ +  YN                     +   W S    + L P SVDWR +GAV P
Sbjct: 98  EFIARFTSYNGDDDRTGDDDSVITTAAVGGGDPDLWSSGGDDVSLDPPSVDWRAKGAVVP 157

Query: 157 VKDQGQCGSC-WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAF 215
            K Q    S  WAF AVA +E ++ +KTGKLV+LSEQ+LVDCD    + GCN G   +AF
Sbjct: 158 PKSQSSSCSSSWAFVAVATIESLHAIKTGKLVALSEQQLVDCD--QYDGGCNRGTFRRAF 215

Query: 216 EFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA------RYA------- 262
            ++ + GG+TTE +YPY      C + K+ HH   I+G+ ++P       ++A       
Sbjct: 216 HWVIQNGGLTTEAEYPYTAAQGTCNSAKSDHHVAAISGHASVPGSNELAMKHAVATQPVA 275

Query: 263 --------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGY 312
                    Q Y  GV+   CG +L H VTVVGYG D   G+KYW+VKNSWG +WGE GY
Sbjct: 276 AAIELGSDMQFYKSGVYSGPCGARLEHAVTVVGYGADESTGDKYWIVKNSWGQTWGERGY 335

Query: 313 IRMARNSPSSNIGICGILMQASYPV 337
           IRM R       G+CGI++  +YP 
Sbjct: 336 IRMQRKILGP--GLCGIMLDVAYPT 358


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/307 (42%), Positives = 177/307 (57%), Gaps = 45/307 (14%)

Query: 67  KQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-------SFKLTDNKFADLSNEEFI 119
           KQY++ Y +E+E +RR  ++ SN   +D+I   NL       +F +  N++ D++NEEF 
Sbjct: 32  KQYNKLYQNEEEARRRL-VWESN---LDFITLHNLAADRGEHTFWVGMNEYGDMTNEEFT 87

Query: 120 STYLGY---NKPYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            T  GY   NK  N P +     +G LP +VDWR +G VTP+K+QGQCGSCW+FSA  ++
Sbjct: 88  KTMNGYRMRNKTSNAPVFMPPNNMGDLPDTVDWRPKGYVTPIKNQGQCGSCWSFSATGSL 147

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG    KTGKLVSLSEQ LVDC     N GC GG M+ AF +I    G+ TE  YPY+ +
Sbjct: 148 EGQTFKKTGKLVSLSEQNLVDCSKKQGNHGCEGGLMDDAFTYIKANNGIDTEASYPYKAR 207

Query: 236 NDRCQTDKTKHHAVTITGYEAIPAR-----------------------YAFQLYSHGVF- 271
           + +C+  K+     T TG+  I  +                        +FQLY  GV+ 
Sbjct: 208 DGKCEF-KSADVGATDTGFVDIKTKDEEALKQAVATVGPISVAIDASHMSFQLYRTGVYH 266

Query: 272 DEYCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           D +C   +L+HGV  VGYG +  + YWLVKNSWG SWG+ GYI+M+RN  ++    CGI 
Sbjct: 267 DWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNRRNN----CGIA 322

Query: 331 MQASYPV 337
             ASYP 
Sbjct: 323 TSASYPT 329


>gi|328776427|ref|XP_625135.3| PREDICTED: cathepsin L-like [Apis mellifera]
          Length = 351

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 174/310 (56%), Gaps = 45/310 (14%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFADLSNEEFISTYL 123
           ++ + Y S+ E + R  I+  N   I   NS    + +S+KL  NK+ D+ + EF++   
Sbjct: 40  EHKKVYKSDVEERFRMKIFMDNKHKIAKHNSNYEMKKVSYKLKMNKYGDMLHHEFVNILN 99

Query: 124 GYNKPYN----EPRWP------SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           G+NK  N      R P          + LP  VDWRKEGAVTPVKDQG CGSCW+FSA  
Sbjct: 100 GFNKSINTQLRSERLPVGASFIEPANVVLPKKVDWRKEGAVTPVKDQGHCGSCWSFSATG 159

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           A+EG +  +TG LVSLSEQ L+DC     N GCNGG M++AF++I    G+ TE  YPY 
Sbjct: 160 ALEGQHFRRTGVLVSLSEQNLIDCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEASYPYE 219

Query: 234 GKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGV 270
            +ND+C+ +     A+ + GY  IP                       +  +FQ YS GV
Sbjct: 220 AENDKCRYNPANSGAIDV-GYIDIPTGDEKLLKAAVATIGPVSVAIDASHQSFQFYSEGV 278

Query: 271 F--DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           +   E    +L+HGV V+GYG  ++G+ YWLVKNSWG +WG  GYI+MARN     +  C
Sbjct: 279 YYEPECSSEELDHGVLVIGYGTNENGQDYWLVKNSWGETWGNNGYIKMARNK----LNHC 334

Query: 328 GILMQASYPV 337
           GI   ASYP+
Sbjct: 335 GIASSASYPL 344


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 189/345 (54%), Gaps = 49/345 (14%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
            L  +L + A A +  Y        ++E ++ +  ++ + Y  E E + R  I++ N   
Sbjct: 3   ILFALLALVAVAQAVSYAD-----VIKEEWQTFKLEHRKNYVDETEERFRLKIFNENKHK 57

Query: 93  IDYIN----SQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN------EPRWPSVQYLG- 141
           I   N    S  +SFK+  NK+AD+ + EF +T  G+N   +      +P +  V ++  
Sbjct: 58  IAKHNQRYASGEVSFKMAVNKYADMLHHEFHTTMNGFNYTLHKQLRASDPSFVGVTFISP 117

Query: 142 ----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
               +P SVDWR +GAVT VKDQG CGSCWAFS+  A+EG +  K G L+SLSEQ LVDC
Sbjct: 118 EHVKIPKSVDWRSKGAVTEVKDQGHCGSCWAFSSTGALEGQHFRKAGTLISLSEQNLVDC 177

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ----------------- 240
                N GCNGG M+ AF +I   GG+ TE  YPY G +D C                  
Sbjct: 178 STKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDRGSVDIP 237

Query: 241 --TDKTKHHAVTITG--YEAIPARY-AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH- 292
              +K    AV   G    AI A + +FQ YS G+++E  C  Q L+HGV VVGYG D  
Sbjct: 238 QGDEKKMAEAVATIGPVSVAIDASHESFQFYSEGIYNEPQCDPQNLDHGVLVVGYGTDES 297

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G+ YWLVKNSWGT+WG+ G+I+MARN+ +     CGI   +SYP+
Sbjct: 298 GQDYWLVKNSWGTTWGDKGFIKMARNADNQ----CGIASASSYPL 338


>gi|8886940|gb|AAF80626.1|AC069251_19 F2D10.37 [Arabidopsis thaliana]
          Length = 315

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 160/283 (56%), Gaps = 40/283 (14%)

Query: 53  YDPQSME------ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLT 106
           Y P+ +E      E FENW+  + + Y + +E   RF ++  N+++ID  N +  S+ L 
Sbjct: 36  YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLG 95

Query: 107 DNKFADLSNEEFISTYLGYN---------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
            N+FADLS+EEF   YLG           + Y E  +  V+   +P SVDWRK+GAV  V
Sbjct: 96  LNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVE--AVPKSVDWRKKGAVAEV 153

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           K+QG CGSCWAFS VAAVEGINK+ TG L +LSEQEL+DCD  + N GCNGG M+ AFE+
Sbjct: 154 KNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDT-TYNNGCNGGLMDYAFEY 212

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------- 260
           I K GG+  E+DYPY  +   C+  K +   VTI G++ +P                   
Sbjct: 213 IVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVA 272

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                  FQ YS GVFD  CG  L+HGV  VGYG   G  Y +
Sbjct: 273 IDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYII 315


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/307 (43%), Positives = 173/307 (56%), Gaps = 44/307 (14%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYI-----DYINSQNLSFKLTDNKFADLSNEEFISTYL 123
           + ++Y S+ E   R  IY  N   I      Y  SQ +S+KL  N+F DL + EF+ST  
Sbjct: 34  HGKDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQ-VSYKLAMNEFGDLLHHEFVSTRN 92

Query: 124 GYNKPYNE-PRWPSV-------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           G+ + Y + PR  S        + L LP +VDWRK+GAVTPVK+QGQCGSCWAFS   ++
Sbjct: 93  GFKRNYRDSPREGSFFVEPEGFEDLQLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSL 152

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  KT KLVSLSEQ LVDC  +  N GC GG M+ AF++I    G+ TE  YPY   
Sbjct: 153 EGPHFRKTRKLVSLSEQNLVDCSRSFGNNGCEGGLMDNAFKYIKSNKGIDTEWSYPYNAT 212

Query: 236 NDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFD 272
           +  C  +++   A T TG+  IP                       +  +FQ YS GV+D
Sbjct: 213 DGVCHFNRSDVGA-TDTGFVDIPEGDENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYD 271

Query: 273 --EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
             E    QL+HGV VVGYG   G+ YWLVKNSWGT+WG+ GYI M RN  +     CGI 
Sbjct: 272 EPECSSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQ----CGIA 327

Query: 331 MQASYPV 337
             ASYP+
Sbjct: 328 SSASYPL 334


>gi|260516672|gb|ACX43963.1| cysteine protease 3, partial [Brachiaria hybrid cultivar]
          Length = 319

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/286 (44%), Positives = 164/286 (57%), Gaps = 33/286 (11%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNLSFKLTDNKFADLSNE 116
           +++ F  ++KQYS+ Y S  E+  RF  + ++V+ I   N+  N S+ +  N+FADLS E
Sbjct: 38  LQDMFTAFMKQYSKAY-SHAEFSSRFNQFKASVETIRLHNTLANASYTMGLNEFADLSFE 96

Query: 117 EFISTYLG---YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
           EF   Y G     + +        +    P S+DWR   AVTP+KDQGQCGSCWAFSA  
Sbjct: 97  EFKGKYFGCKHVEREFARSNNLHQEVEAAPTSIDWRTSNAVTPIKDQGQCGSCWAFSATG 156

Query: 174 AVEGINKLKTGK--LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
           ++EG   L+ GK  L SLSEQ+LVDC  +  N GCNGG M+ AFE+I    G+  E  YP
Sbjct: 157 SIEGAWVLQ-GKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIANKGICAESAYP 215

Query: 232 YRGKNDRCQTDKTKHHAVTITGYE----------------------AIPARYA-FQLYSH 268
           Y+G    CQ   TK   VTI+G++                      AI A  A FQ YS 
Sbjct: 216 YKGVGGLCQKSCTK--VVTISGHKDVASGDEASSLNAVGTVGPVSVAIEADQAGFQFYSS 273

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIR 314
           GVF   CGH L+HGV  VGYG    + YW+VKNSWGTSWGE+GYIR
Sbjct: 274 GVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIR 319


>gi|357139514|ref|XP_003571326.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2-like
           [Brachypodium distachyon]
          Length = 363

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/338 (35%), Positives = 175/338 (51%), Gaps = 48/338 (14%)

Query: 46  SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS--- 102
           + G P   D   + +R+  W  +YS+ Y S +E ++RFG++  N   I   ++   +   
Sbjct: 27  AAGKPAADDDSELRQRWSKWQAKYSKRYPSHEEQEKRFGVFRDNSNSIGAFSAPQTTTSA 86

Query: 103 -------------FKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG----LPAS 145
                         ++  N+F DL   E +  + G+N      + P    L      P  
Sbjct: 87  VVGSFGAPQTVTTVRVGMNRFGDLQPREVLDQFTGFNNTAAVLKTPPPTRLPHHSRKPCC 146

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR  GAVT VK QG C SCWAF+AVAA+EG+NK++TG LVSLSEQ+LVDCD  S   G
Sbjct: 147 VDWRSSGAVTGVKFQGSCQSCWAFAAVAAIEGMNKIRTGTLVSLSEQQLVDCDNGSS--G 204

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIP------ 258
           C GG  + A + + + GG+T+ + Y Y G N RC+ DK    H   + G++A+P      
Sbjct: 205 CAGGRTDTALDLVARRGGITSGERYAYGGFNGRCKVDKLLFDHGAAVGGFKAVPPNDEHQ 264

Query: 259 ----------------ARYAFQLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLV 299
                           + + FQ YS G+F   C     ++NH VT+VGY E+ G+K+W+ 
Sbjct: 265 LAMAVARQPVTAYVDASTWEFQFYSGGIFRGPCSGDPARVNHAVTIVGYCEEFGDKFWIA 324

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSW   WG+ GYI +A++  SS  G CG+     YP 
Sbjct: 325 KNSWSDDWGDQGYILLAKDVLSSPNGTCGLATSPFYPT 362


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 177/320 (55%), Gaps = 45/320 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFADL 113
           ++E ++ +  ++ + Y SE E + R  I++ N   I   N       +SFKL  NK+AD+
Sbjct: 23  IKEEWQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADM 82

Query: 114 SNEEFISTYLGYN----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
            + EF  T  GYN          + +N   + S   + +P +VDWR+ GAVT VKDQG C
Sbjct: 83  LHHEFKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSVKDQGHC 142

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCW+FS+  ++EG +  K G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG
Sbjct: 143 GSCWSFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGG 202

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------AR 260
           V TE  YPY G +D C  +K    A T TG+  IP                       + 
Sbjct: 203 VDTEKSYPYEGIDDSCHFNKATVGA-TDTGFVDIPQGDEEAMMKAVATMGPVAVAIDASN 261

Query: 261 YAFQLYSHGVF-DEYC-GHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMAR 317
            +FQLYS GV+ D  C    L+HGV VVGYG D  G+ YWLVKNSWGT+WG+ GYI+MAR
Sbjct: 262 ESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGTDKDGQDYWLVKNSWGTTWGDQGYIKMAR 321

Query: 318 NSPSSNIGICGILMQASYPV 337
           N  +     CGI   +S+P 
Sbjct: 322 NQDNQ----CGIATASSFPT 337


>gi|310942960|pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
          Length = 220

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 136/219 (62%), Gaps = 24/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP  VDWR  GAV  +KDQGQCGSCWAFS +AAVEGINK+ TG L+SLSEQELVDC    
Sbjct: 1   LPDYVDWRSSGAVVDIKDQGQCGSCWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ 60

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
             +GC+GG+M   F+FI   GG+ TE +YPY  +  +C  D  +   V+I  YE +P   
Sbjct: 61  NTRGCDGGFMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNN 120

Query: 259 -------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                              A Y FQ YS G+F   CG  ++H VT+VGYG + G  YW+V
Sbjct: 121 EWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIV 180

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSWGT+WGE GY+R+ RN     +G CGI  +ASYPVK
Sbjct: 181 KNSWGTTWGEEGYMRIQRN--VGGVGQCGIAKKASYPVK 217


>gi|118119|sp|P13277.2|CYSP1_HOMAM RecName: Full=Digestive cysteine proteinase 1; Flags: Precursor
 gi|11051|emb|CAA45127.1| cysteine proteinase preproenzyme [Homarus americanus]
 gi|228243|prf||1801240A Cys protease 1
          Length = 322

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/306 (41%), Positives = 174/306 (56%), Gaps = 36/306 (11%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           E +  ++ R+Y   +E + R  ++  N+QYI+  N +     +++ L  N+F+D++NE+F
Sbjct: 21  EEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF 80

Query: 119 ISTYLGYNK-PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
            +   GY K P     + S         VDWR +GAVTPVKDQGQCGSCWAFS    +EG
Sbjct: 81  NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEG 140

Query: 178 INKLKTGKLVSLSEQELVDCDVNS-ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
            + LKTG+LVSLSEQ+LVDC   S  NQGCNGG++E+A  ++   GGV TE  YPY  ++
Sbjct: 141 QHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARD 200

Query: 237 DRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYSHGVFDE 273
           + C+ +     A T TGY  I                        +  +FQ Y  GV+ E
Sbjct: 201 NTCRFNSNTIGA-TCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYE 259

Query: 274 --YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
                 QL+H V  VGYG + G+ +WLVKNSW TSWGE+GYI+MARN  ++    CGI  
Sbjct: 260 PSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNN----CGIAT 315

Query: 332 QASYPV 337
            A YP 
Sbjct: 316 DACYPT 321


>gi|186701255|gb|ACC91281.1| putative cysteine proteinase [Capsella rubella]
          Length = 324

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 192/327 (58%), Gaps = 32/327 (9%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER---FENWLKQYSREYGSE-DEWQRRFG 84
           +++L LL +  +P  +  +        +S EE    F+ W+ ++ + Y +   + ++RF 
Sbjct: 9   MITLSLLIIFLLPPSSAMDLSVTSGGLRSNEEVGFIFQTWMSKHGKTYTNALGDKEQRFQ 68

Query: 85  IYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL---- 140
            +  N+++ID  N++NLS++L   +FADL+ +E+   + G  +P  + +   V +     
Sbjct: 69  NFKDNLRFIDQHNAKNLSYRLGLTQFADLTVQEYQDLFSG--RPIQKQKALRVTHRYVPL 126

Query: 141 ---GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
               LP SVDWR++GAV+ +KDQG+C           VE INK+ TG+L+SLSEQELVDC
Sbjct: 127 AEDQLPQSVDWRQKGAVSEIKDQGRC----------TVESINKIVTGELISLSEQELVDC 176

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK-TKHHAVTITGYEA 256
            +  +N GCNGG M+ AF+F+    G+  + DYPY+     C  ++ T    + I GYE 
Sbjct: 177 SI--DNHGCNGGLMDSAFQFLINNNGLEYQSDYPYQAVQGYCNHNQNTSKKVIKIDGYED 234

Query: 257 IPARYAFQL-----YSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAG 311
           +PA     L     +  G++   CG  L+H V +VGYG ++G+ YW+V+NSWGT WGEAG
Sbjct: 235 VPANNENSLQKAVAHQPGIYTGPCGTDLDHAVVIVGYGTENGQDYWIVRNSWGTVWGEAG 294

Query: 312 YIRMARNSPSSNIGICGILMQASYPVK 338
           Y ++ARN  +   G+CGI M ASYP+K
Sbjct: 295 YAKIARNFENPT-GVCGIAMVASYPIK 320


>gi|357127811|ref|XP_003565571.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 364

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/329 (37%), Positives = 177/329 (53%), Gaps = 49/329 (14%)

Query: 55  PQS-MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS----------- 102
           P+S + +R+ NW  +YS+ Y S +E ++RFG++  N+  I   ++   +           
Sbjct: 38  PESELRQRWTNWQAKYSKTYPSHEEQEKRFGVFRGNINNIGAFSAAQTTTTAVVGSFGAP 97

Query: 103 -----FKLTDNKFADLSNEEFISTYLGYNKP--YNEPRWPSVQYLGL-PASVDWRKEGAV 154
                 ++  N+F DL   E +  + G+N       P+   + Y    P  VDWR  GAV
Sbjct: 98  QTVTTVRVGMNRFGDLQPSEVLEQFTGFNSTVVLKTPKPTRLPYHSRKPCCVDWRSSGAV 157

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
           T VK QG C SCWAF+AVAA+EG+NK++TG LVSLSEQ+LVDCD  S   GC GG  + A
Sbjct: 158 TGVKFQGSCLSCWAFAAVAAIEGMNKIRTGTLVSLSEQQLVDCDKGSS--GCAGGRTDTA 215

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-HHAVTITGYEAIP--------------- 258
            + + K GG+T+E+ YPY G N +C  DK    HA  + G++A+P               
Sbjct: 216 LDLVAKRGGITSEEKYPYGGFNGKCNVDKLLFEHAAIVKGFKAVPPNDEHQLALAVAQQP 275

Query: 259 -------ARYAFQLYSHGVFDEYCG---HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWG 308
                  + + FQ YS G+F   C     ++NH VT+VGY ED GEK+W+ KNSW   WG
Sbjct: 276 VTVYVDASTWEFQFYSGGIFRGPCSTDPARVNHAVTIVGYCEDFGEKFWIAKNSWSNDWG 335

Query: 309 EAGYIRMARNSPSSNIGICGILMQASYPV 337
           + GYI +A++  +   G C +     YP 
Sbjct: 336 DQGYIYLAKDV-AWPTGTCSLASSPFYPT 363


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 177/319 (55%), Gaps = 44/319 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFADL 113
           ++E ++ +  ++ + + SE E + R  I++ N   I   N       +SFKL  NK++D+
Sbjct: 23  IKEEWQTFKMEHRKNFLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYSDM 82

Query: 114 SNEEFISTYLGYN----KPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCG 164
              EF  T  GYN    K      +  + Y+      +P SVDWR+ GAVT VKDQG CG
Sbjct: 83  LYHEFKETMNGYNHTMRKVLRAQGFSGIIYIPPANVQIPKSVDWRQHGAVTAVKDQGHCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+ AA+EG +  K G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWAFSSTAALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY G +D C   K+   A T TG+  IP                       +  
Sbjct: 203 DTEKSYPYEGIDDSCHFTKSGVGA-TDTGFVDIPQGDEEALMKAVATMGPVSVAIDASHE 261

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQLYS GV++E  C  Q L+HGV VVGYG D  G  YWLVKNSWGT+WG+ GYI+MARN
Sbjct: 262 SFQLYSEGVYNEPECDAQNLDHGVLVVGYGTDKTGLDYWLVKNSWGTTWGDQGYIKMARN 321

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP 
Sbjct: 322 QDNQ----CGIATASSYPT 336


>gi|357122137|ref|XP_003562772.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 358

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 178/325 (54%), Gaps = 48/325 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           M +RF  +   Y+R Y S +E  RRF +Y  NV YI+ +N + +L+++L +N+FADL+ +
Sbjct: 36  MMDRFRAFQATYNRTYASPEERLRRFEVYRRNVDYIEAMNRRGDLTYELGENQFADLTVQ 95

Query: 117 EFISTYLGYNKPYNEP-RWPSVQYLGL---------------------PASVDWRKEGAV 154
           EF + Y    +  + P  W   Q +                       P SVDWR +GAV
Sbjct: 96  EFRAMYTMPARVDSRPDAWRRRQMITTLAGPVTEDGGSYYSDAWEEAGPTSVDWRSKGAV 155

Query: 155 TPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKA 214
           TPVKDQG CG CWAF+ VA +EG++K+KTG+LVSLSEQELVDCD   +  G      E A
Sbjct: 156 TPVKDQGGCGCCWAFATVATIEGLHKIKTGQLVSLSEQELVDCDDADDGCGGG--LPEIA 213

Query: 215 FEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE------------------- 255
            E++   GG+TTE +YPY GK  +C   K  +HA  I   +                   
Sbjct: 214 MEWVAHNGGLTTEANYPYTGKAGKCDRGKASNHAAKIAAAQMVRANSEAELERAVARQPV 273

Query: 256 --AIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGY 312
             AI A  +   Y  GV+   C  + +H VTVVGYG D+ G KYW++KNSW  +WGE GY
Sbjct: 274 AVAINAPDSLMFYKSGVYSGPCTAEFDHAVTVVGYGADNKGHKYWIIKNSWAETWGEKGY 333

Query: 313 IRMARNSPSSNIGICGILMQASYPV 337
            RM R   +   G+CGI   ASYPV
Sbjct: 334 GRMQRGVAAKE-GLCGIATHASYPV 357


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 184/315 (58%), Gaps = 38/315 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFA 111
           Q  E+ ++ +   + + Y + +E  RRF I+  NVQ I+  N        S+ L  N+F+
Sbjct: 50  QPYEQAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFS 109

Query: 112 DLSNEEFISTYLGYNKPYNE----PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           DL +EEF+  Y G  K   +      + +   L  P SVDWRK+G VT VK+QGQCGSCW
Sbjct: 110 DLKHEEFVK-YNGLKKTSLKDGGCSSYLAANNLVEPDSVDWRKKGYVTDVKNQGQCGSCW 168

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           +FS   ++EG +  K+GKLVSLSE +LVDC  +  N+GCNGG M+ AF++I  +GG+ +E
Sbjct: 169 SFSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGGLESE 228

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTI------TGYE---------------AIPARY-AFQL 265
           +DYPY+ K   C+ D TK  A         +G E               AI A + +FQ 
Sbjct: 229 EDYPYKPKQGTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQS 288

Query: 266 YSHGVFD--EYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           Y+ GV+D  E    QL+HGV  VGYG +D G+ YW+VKNSWG  WGE GY++M+RN  + 
Sbjct: 289 YAGGVYDEPECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRNKKNQ 348

Query: 323 NIGICGILMQASYPV 337
               CGI  QASYP+
Sbjct: 349 ----CGIATQASYPL 359


>gi|449530091|ref|XP_004172030.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 351

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 181/320 (56%), Gaps = 41/320 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           +S+ + ++ W   + R   + +E   RF ++ +N +++  +N    S KL  N+FAD+S+
Sbjct: 35  KSLMQLYKRW-SSHHRISRNANEMHNRFKVFKNNAKHVFKVNLMGKSLKLKLNQFADMSD 93

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLG-------------LPASVDWRKEGAVTPVKDQGQ 162
           +EF + Y      Y +     ++  G             +P+S+DWRK+GAV  +K+QG+
Sbjct: 94  DEFRNMYSSNITYYKDLHAKKIEATGGRIGGFMYEHANNIPSSIDWRKKGAVNAIKNQGR 153

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAF+AVAAVE I+++KT +LVSLSE+E++DCD    + GC GG+   AFEF+    
Sbjct: 154 CGSCWAFAAVAAVESIHQIKTNELVSLSEEEVLDCDY--RDGGCRGGFYNSAFEFMMDND 211

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA--RYA------------------ 262
           GVT ED+YPY   N  C+    ++  V I GYE +P    YA                  
Sbjct: 212 GVTIEDNYPYYEGNGYCRRRGGRNKRVRIDGYENVPRNNEYALMKAVAHQPVAVAIASGG 271

Query: 263 --FQLYSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
             F+ Y  G+F E  +CG  ++H V VVGYG D    YW+++N +G  WG  GY++M R 
Sbjct: 272 SDFKFYGGGMFTENDFCGFNIDHTVVVVGYGTDEDGDYWIIRNQYGHRWGMNGYMKMQRG 331

Query: 319 SPSSNIGICGILMQASYPVK 338
           + S   G+CG+ MQ +YPVK
Sbjct: 332 AHSPQ-GVCGMAMQPAYPVK 350


>gi|2098464|pdb|1PCI|A Chain A, Procaricain
 gi|2098465|pdb|1PCI|B Chain B, Procaricain
 gi|2098466|pdb|1PCI|C Chain C, Procaricain
          Length = 322

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 187/323 (57%), Gaps = 39/323 (12%)

Query: 48  GYPQKYDPQSMEER----FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSF 103
           GY Q  D  +  ER    F +W+  +++ Y + DE   RF I+  N+ YID  N +N S+
Sbjct: 6   GYSQ--DDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSY 63

Query: 104 KLTDNKFADLSNEEFISTYLG------YNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPV 157
            L  N+FADLSN+EF   Y+G        + Y+E  + +   + LP +VDWRK+GAVTPV
Sbjct: 64  WLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDE-EFINEDIVNLPENVDWRKKGAVTPV 122

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           + QG CGSCWAFSAVA VEGINK++TGKLV LSEQELVDC+  S   GC GGY   A E+
Sbjct: 123 RHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS--HGCKGGYPPYALEY 180

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG------------YEAIPAR----- 260
           + K  G+     YPY+ K   C+  +     V  +G              AI  +     
Sbjct: 181 VAK-NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVV 239

Query: 261 -----YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
                  FQLY  G+F+  CG +++  VT VGYG+  G+ Y L+KNSWGT+WGE GYIR+
Sbjct: 240 VESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRI 299

Query: 316 ARNSPSSNIGICGILMQASYPVK 338
            R +P ++ G+CG+   + YP K
Sbjct: 300 KR-APGNSPGVCGLYKSSYYPTK 321


>gi|219362839|ref|NP_001136636.1| uncharacterized protein LOC100216764 precursor [Zea mays]
 gi|194696462|gb|ACF82315.1| unknown [Zea mays]
 gi|413934556|gb|AFW69107.1| hypothetical protein ZEAMMB73_554980 [Zea mays]
          Length = 361

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 178/330 (53%), Gaps = 55/330 (16%)

Query: 56  QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           +S+   +E W   Y  +R+ G   E  RRF ++  N   I   N  N ++ L  N+F+D+
Sbjct: 41  ESLWALYERWCAHYNMARDLG---EKTRRFNLFKENAHRIYEHNQGNATYTLGLNRFSDM 97

Query: 114 SNEEFISTYLGY---------------------NKPYNEPRWPSVQYLGLPASVDWRKEG 152
           ++EEF  +  G                      +  +N     +   LGLP SVDWR   
Sbjct: 98  TDEEFSRSPYGRCLFAPVQRISDGENEELQQHEDVSFNLTHGGATAALGLPPSVDWRGR- 156

Query: 153 AVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYM 211
           +VT VKDQG  CGSCWAF+A+AAVEGIN ++T  LV+LSEQ+LVDCD  + + GC GG++
Sbjct: 157 SVTRVKDQGLTCGSCWAFAAIAAVEGINAIRTWSLVTLSEQQLVDCD--NVDHGCAGGWI 214

Query: 212 EKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI-------------- 257
             A +FI +  G+  E  YPY G   RC+        VTI GY  +              
Sbjct: 215 PSALDFIVRNRGIVPEGTYPYIGTQGRCR--HVMAPPVTIDGYRRVLPFDVNALMSAVAA 272

Query: 258 --------PARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGE 309
                    + +AF+ Y  GVF+  CG +L H   VVGYG+  G  +W+VKNSWG  WGE
Sbjct: 273 QPVAVAMESSAWAFRHYQGGVFNGNCGGRLGHAAAVVGYGDGAGGPFWIVKNSWGPKWGE 332

Query: 310 AGYIRMARNSPSSNIGICGILMQASYPVKR 339
            GY+R++RN+P + +GICGIL Q  YPVKR
Sbjct: 333 GGYVRISRNAP-NRLGICGILTQPLYPVKR 361


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/309 (43%), Positives = 175/309 (56%), Gaps = 39/309 (12%)

Query: 63  ENWLK---QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E WL    Q+ + Y +  E   R  +Y  N + ID  N +     +S+KL  N F DL  
Sbjct: 24  EEWLAFKAQFGKSYKNSFEELFRMNVYKENQRKIDEHNKRYENGEVSYKLKMNHFGDLMQ 83

Query: 116 EEF--ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVA 173
            EF  ++      K  N           LPA VDWR++GAVTPVKD GQCGSCWAFS+  
Sbjct: 84  HEFKALNKLKRSAKQQNSGEVFRATGGKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTG 143

Query: 174 AVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYR 233
           ++ G   LK  KLVSLSEQ+LVDC  N  N GC+GG M +AF++I   GG+ TE  YPY 
Sbjct: 144 SLGGQLFLKNKKLVSLSEQQLVDCSGNYGNDGCDGGIMVQAFQYIKGNGGIDTEGSYPYE 203

Query: 234 GKNDRCQTDKTKHHAVTITGY------------EAI-----------PARYAFQLYSHGV 270
            ++D+C+  KTK  A T  GY            EA+               +FQ YS G+
Sbjct: 204 AEDDKCRY-KTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQFYSEGI 262

Query: 271 FDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           +DE +C + +L+HGV VVGYG ++G+ YWLVKNSWG SWGE GYI++ARN  +     CG
Sbjct: 263 YDEPFCSNTELDHGVLVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNH----CG 318

Query: 329 ILMQASYPV 337
           I   ASYP+
Sbjct: 319 IASMASYPI 327


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 170/310 (54%), Gaps = 42/310 (13%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEE 117
           F  +  QY R+Y +  E + R  +Y  N+++I+  N Q     +++ L  N+F D++NEE
Sbjct: 22  FHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMTNEE 81

Query: 118 FISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
            I+  +    P +E R   V  LG     LPA VDWR +GAVTPVKDQ  CGSCWAFSA 
Sbjct: 82  -INAVMNGLLPASESR--GVAVLGGRDDTLPAEVDWRTKGAVTPVKDQKACGSCWAFSAT 138

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            ++EG + LK GKLVSLSEQ LVDC     + GC GG M+ AF +I   GG+ TE  YPY
Sbjct: 139 GSLEGQHFLKDGKLVSLSEQNLVDCSTKQGDHGCGGGLMDFAFTYIKDNGGIDTEASYPY 198

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYSHG 269
              + +CQ +     A T+TGY  +                        +R  F  Y  G
Sbjct: 199 EATDGKCQYNPANSGA-TVTGYVDVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKG 257

Query: 270 V-FDEYCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V +D+ C    L+HGV  VGYG   G  YWLVKNSW  +WG  G+I M+RN  ++    C
Sbjct: 258 VYYDKECSSTSLDHGVLAVGYGTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNN----C 313

Query: 328 GILMQASYPV 337
           GI  QASYP+
Sbjct: 314 GIATQASYPL 323


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 182/318 (57%), Gaps = 46/318 (14%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLS 114
           +  F  W  ++ R Y S  E  +R  I+  N + +   N+     + +++L    +ADL 
Sbjct: 23  DHDFHAWKLKFGRSYNSSSEEDKRMQIWLRNREIVMAHNAMADQGHSTYRLGMTFYADLE 82

Query: 115 NEEFISTYLG-----YNKPYNEPRWPSV-----QYLGLPASVDWRKEGAVTPVKDQGQCG 164
           +EEF  T  G     +N   ++PR  S      ++  LP ++DWR+ G VTPVK+QG CG
Sbjct: 83  HEEFKQTVFGVCLGSFNA--SKPRGGSSFLKMHRFYNLPQTIDWRQWGFVTPVKNQGSCG 140

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FS+  A+EG N  KTG+LVSLSEQELVDC  N  N GCNGG+M+ AF +I   GG+
Sbjct: 141 SCWSFSSTGALEGQNFRKTGRLVSLSEQELVDCSGNYGNYGCNGGWMDNAFRYIVNKGGI 200

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TED YPY G+  +C+ +  +  A T TGY  IP                       +  
Sbjct: 201 HTEDSYPYEGQVGQCRANYGEIGA-TCTGYYDIPSGNEHALKEAVATFGPVSVAIHASDQ 259

Query: 262 AFQLYSHGVFDE-YC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
           +FQLY  GV++  YC G  L+H V +VGYG ++G+ YWLVKNSWG +WG+ GYI+M+RN 
Sbjct: 260 SFQLYHSGVYNNPYCSGTALDHAVLIVGYGTEYGQDYWLVKNSWGPAWGDQGYIKMSRNR 319

Query: 320 PSSNIGICGILMQASYPV 337
            +     CGI   AS+P+
Sbjct: 320 YNQ----CGIASAASFPL 333


>gi|57118009|gb|AAW34136.1| cysteine protease gp3a [Zingiber officinale]
          Length = 475

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/344 (38%), Positives = 191/344 (55%), Gaps = 38/344 (11%)

Query: 28  AVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYS 87
           AV  +  L +L +   AW+   P     + +   ++ W  ++      +     R  ++ 
Sbjct: 20  AVSVVPPLDILTLSKQAWAA--PAGRSDEEVRIIYQEWRVKHRPAENDQYVGDYRLEVFK 77

Query: 88  SNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV--QYL- 140
            N++++D  N+       +++L  N+FADL+NEE+ + +L             +  QY  
Sbjct: 78  ENLRFVDEHNAAADRGEHAYRLGMNRFADLTNEEYRARFLRDLSRLGRSTSGEISNQYRL 137

Query: 141 ----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                LP S+DWR++GAV  VK+QG+CGSCWAF+A+AAVEGIN++ TG L+SLSEQ+LVD
Sbjct: 138 REGDVLPDSIDWREKGAVVAVKNQGRCGSCWAFAAIAAVEGINQIVTGDLISLSEQQLVD 197

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           C  ++ N GC GG+  +AF++I   GGV +E+ YPY G N  C T K   H V+I  Y  
Sbjct: 198 C--STRNYGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNGTCNTTKENAHVVSIDSYRN 255

Query: 257 IPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGE 294
           +P+                         FQLY  G+F   C   LNHGVTVVGYG ++G 
Sbjct: 256 VPSNDEKSLQKAAANQPISVGIDASGRNFQLYHSGIFTGSCNTSLNHGVTVVGYGTENGN 315

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
            YW+VKNSWG +WG +GYI M RN   S+ G CGI +  SYP+K
Sbjct: 316 DYWIVKNSWGENWGNSGYILMERNIAESS-GKCGIAISPSYPIK 358


>gi|66810271|ref|XP_638859.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
 gi|166201983|sp|Q23894.2|CYSP3_DICDI RecName: Full=Cysteine proteinase 3; AltName: Full=Cysteine
           proteinase II; Flags: Precursor
 gi|60467526|gb|EAL65548.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 192/347 (55%), Gaps = 45/347 (12%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           +R ++  +F L VL I   +    +  K      ++ F +W++  ++ Y +  E+  R+ 
Sbjct: 1   MRLSITLIFTLIVLSISFISAGNVFSHK----QYQDSFIDWMRSNNKAY-THKEFMPRYE 55

Query: 85  IYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLG---------YNKPYNEPRWP 135
            +  N+ Y+   NS+     L  N+ ADLSNEE+   YLG         Y+K     R  
Sbjct: 56  EFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLN 115

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
             Q+   P +VDWR++ AVTPVKDQGQCGSC++FS   +VEG+  +KTGKLVSLSEQ ++
Sbjct: 116 RPQF-KQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNIL 174

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK-NDRCQTDKTKHHAVTITGY 254
           DC  +  N+GCNGG M  AFE+I K  G+ +E+ YPY  K ND C+  +    A  IT Y
Sbjct: 175 DCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGS-VAAKITSY 233

Query: 255 EAIPA----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGE 290
           + I A                        +FQLY+ GV+ E  C  + L+HGV  VG G 
Sbjct: 234 KEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGT 293

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           D+GE Y++VKNSWG SWG  GYI MARN  ++    CGI   ASYP+
Sbjct: 294 DNGEDYYIVKNSWGPSWGLNGYIHMARNKDNN----CGISTMASYPI 336


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/304 (41%), Positives = 173/304 (56%), Gaps = 33/304 (10%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           +++  QY R+YG   E   R  ++  N Q I+  N +     ++FK+  N+F D++NEEF
Sbjct: 20  DHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEF 79

Query: 119 ISTYLGYNK-PYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
            +   GY K    EP+       G + A VDWR +  VTPVKDQ QCGSCWAFSA  A+E
Sbjct: 80  NAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALE 139

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G + LK  +LVSLSEQ+LVDC  +  N GC GG+M  AF++I   GG+ TE  YPY  ++
Sbjct: 140 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 199

Query: 237 DRCQTDKTKHHAVTITGYE--------------------AIPA-RYAFQLYSHGV-FDEY 274
             C+ D     A+     E                    AI A  ++FQ YS GV +++ 
Sbjct: 200 RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQN 259

Query: 275 CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV  VGYG +  + YWLVKNSWG+SWG+AGYI+M+RN  ++    CGI  + 
Sbjct: 260 CSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNN----CGIASEP 315

Query: 334 SYPV 337
           SYP 
Sbjct: 316 SYPT 319


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/304 (41%), Positives = 173/304 (56%), Gaps = 33/304 (10%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           +++  QY R+YG   E   R  ++  N Q I+  N +     ++FK+  N+F D++NEEF
Sbjct: 21  DHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEF 80

Query: 119 ISTYLGYNK-PYNEPRWPSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
            +   GY K    EP+       G + A VDWR +  VTPVKDQ QCGSCWAFSA  A+E
Sbjct: 81  NAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALE 140

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G + LK  +LVSLSEQ+LVDC  +  N GC GG+M  AF++I   GG+ TE  YPY  ++
Sbjct: 141 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 200

Query: 237 DRCQTDKTKHHAVTITGYE--------------------AIPA-RYAFQLYSHGV-FDEY 274
             C+ D     A+     E                    AI A  ++FQ YS GV +++ 
Sbjct: 201 RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQN 260

Query: 275 CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV  VGYG +  + YWLVKNSWG+SWG+AGYI+M+RN  ++    CGI  + 
Sbjct: 261 CSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNN----CGIASEP 316

Query: 334 SYPV 337
           SYP 
Sbjct: 317 SYPT 320


>gi|410898132|ref|XP_003962552.1| PREDICTED: cathepsin L-like [Takifugu rubripes]
          Length = 335

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 185/322 (57%), Gaps = 43/322 (13%)

Query: 54  DPQSMEE-RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI---DYINSQNL-SFKLTDN 108
           D  S+EE  F  W  ++ R Y +  E  +R  I+ +N + +   + +  Q + S++L   
Sbjct: 18  DGMSLEEMEFHAWKLKFGRSYRTPSEEVQRMQIWLNNRKLVLVHNILADQGIKSYRLGMT 77

Query: 109 KFADLSNEEFISTY-LGYNKPYN--EPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQ 160
           +FAD+ NEE+ S   LG  + +N   PR  S  +       LP +VDWR +G VT VKDQ
Sbjct: 78  QFADMDNEEYKSLISLGCLRAFNTSAPRRGSAFFRLAEGTHLPTTVDWRDKGYVTGVKDQ 137

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
            QCGSCWAFSA  ++EG N  KTGKLVSLSEQ+LVDC  +  N GCNGG M+ AF++I +
Sbjct: 138 KQCGSCWAFSATGSLEGQNFRKTGKLVSLSEQQLVDCSGDYGNMGCNGGLMDYAFKYIQE 197

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY------------EAI----------- 257
            GG+ TE  YPY  ++ +C+  K ++     TGY            EA+           
Sbjct: 198 NGGIDTEKSYPYEAEDGQCRF-KPENVGAKCTGYVDVTVGDEDALKEAVATIGPVSVGID 256

Query: 258 PARYAFQLYSHGVFDEY-CGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRM 315
            +  +FQLY  GV+DE  C  Q L+HGV  VGYG D+G+ YWLVKNSWG  WG+ GYI M
Sbjct: 257 ASHSSFQLYDSGVYDEQDCSSQDLDHGVLAVGYGTDNGQDYWLVKNSWGLGWGQEGYIMM 316

Query: 316 ARNSPSSNIGICGILMQASYPV 337
           +RN  +     CGI   ASYP+
Sbjct: 317 SRNKDNQ----CGIATAASYPL 334


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 180/323 (55%), Gaps = 48/323 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           + E +  +  ++ ++Y SE E + R  IY+ N   +   N +     +S++L  NK++D+
Sbjct: 23  VREEWNTFKLEHKKQYDSETEEKFRMKIYAENKHKVAKHNQRYQKGLVSYRLKTNKYSDM 82

Query: 114 SNEEFISTYLGYNKPYNEPR-------------WPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            + EF++T  G+NK     +             + S   +  P +VDWR+ GAVTPVKDQ
Sbjct: 83  LHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSPANVAAPPTVDWRQHGAVTPVKDQ 142

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCW+FS   A+EG +  K+G LVSLSEQ L+DC     N GCNGG M+ AF++I  
Sbjct: 143 GKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDCSSAYGNNGCNGGLMDNAFKYIKD 202

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA--------------------- 259
             G+ TE  YPY   +D+C+ +  K+      G+  IPA                     
Sbjct: 203 NDGIDTEKTYPYEAVDDKCRYN-PKNSGAEDVGFVDIPAGDEHKLMLALATVGPVSVAID 261

Query: 260 --RYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIR 314
             + +FQLYS GV +DE C  + L+HGV VVGYG D  G  YWLVKNSWG SWG+ GYI+
Sbjct: 262 ASQESFQLYSDGVYYDENCSSENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSWGDEGYIK 321

Query: 315 MARNSPSSNIGICGILMQASYPV 337
           MARN  +     CGI   ASYP+
Sbjct: 322 MARNRDNH----CGIASSASYPL 340


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 187/347 (53%), Gaps = 49/347 (14%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           +  +L +L + A A +  Y +      ++E +  +  ++ + Y  E E + R  I++ N 
Sbjct: 3   TALILPLLALVAVAQAVSYAE-----VIQEEWHTFKLEHRKNYQDETEERFRLKIFNENK 57

Query: 91  QYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLGYN-----------KPYNEPRWP 135
             I   N    +  +SFK+  NK+AD+ + EF ST  G+N           + +    + 
Sbjct: 58  HKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFNYTLHKQLRNADESFKGVTFI 117

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
           S +++ LP  VDWR +GAVT VKDQG CGSCWAFS+  A+EG +  K+G LVSLSEQ LV
Sbjct: 118 SPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLV 177

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ--------------- 240
           DC     N GCNGG M+ AF +I   GG+ TE  YPY   +D C                
Sbjct: 178 DCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGSIGATDRGFVD 237

Query: 241 ----TDKTKHHAVTITGYEAI---PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGED 291
                +K    AV   G  A+    +  +FQ YS GV++E  C  Q L+HGV VVG+G D
Sbjct: 238 IPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACDAQNLDHGVLVVGFGTD 297

Query: 292 H-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             GE YWLVKNSWGT+WG+ G+I+M RN  +     CGI   +SYP+
Sbjct: 298 ESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQ----CGIASASSYPL 340


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 176/334 (52%), Gaps = 40/334 (11%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
             +L VL   +  WS  + Q       +  +  W   + + Y    E + R  I+  N++
Sbjct: 4   FLVLCVLVASSRGWSVRFGQ-------DSEWVAWKSYHGKSYSDVHEERTRMAIWQQNLE 56

Query: 92  YIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASV 146
            I   N+++ S+K+  N   DL+ +EF   YLG    +N  +     Y+      +P+SV
Sbjct: 57  KIKRHNAEDHSYKMAMNHLGDLTEDEFRYFYLGVRAHHNSTKRGWATYMPPSNVKIPSSV 116

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DW ++G VT VK+QGQCGSCWAFS   +VEG +  KTG LVSLSEQ L+DC  +  N GC
Sbjct: 117 DWSQKGYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGC 176

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA------- 259
            GG M+ AF +I   GG+ TE  YPY G+   C    + H    +TGY+ IP        
Sbjct: 177 QGGLMDNAFRYIESNGGIDTESSYPYLGQQGSCHF-SSSHVGARVTGYQDIPQGSEQALQ 235

Query: 260 --------------RYAFQLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSW 303
                            +Q YS GV+D  YC   QL+HGV V+GYG  +G+ YWLVKNSW
Sbjct: 236 SAVATVGPVSVAVDASQWQFYSSGVYDNPYCSSTQLDHGVLVIGYGNYNGQDYWLVKNSW 295

Query: 304 GTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G SWG  GYI M+RN  +     CGI   ASYP+
Sbjct: 296 GYSWGVEGYIMMSRNKNNQ----CGIASSASYPL 325


>gi|354549232|gb|AER27707.1| putative cysteine protease [Phytophthora sp. SH-2011]
          Length = 533

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 172/318 (54%), Gaps = 46/318 (14%)

Query: 55  PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFAD 112
           P   E  F  W+  +   +    E+ RR   Y  N  YI   N++N      L  N F+ 
Sbjct: 21  PLEYEHEFSAWMGAHGVTFSDALEFARRLENYIVNDMYIMEHNAENAWTGVTLGHNAFSH 80

Query: 113 LSNEEFISTYLGYNKP--YNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           +S +EF     G   P  Y E R        W  V+   +P++VDW  +G VTPVK+QG 
Sbjct: 81  MSFDEFKFKMTGLVLPEGYLEQRLASRVDGLWSDVE---VPSAVDWVDKGGVTPVKNQGM 137

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   AVEG   + +GKL SLSEQELVDCD N +  GCNGG M+ AF++I   G
Sbjct: 138 CGSCWAFSTTGAVEGATFVSSGKLPSLSEQELVDCDHNGD-MGCNGGLMDHAFQWIEDHG 196

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE---------------------AIPA-R 260
           G+ +EDDY Y+ K   C+   +    V +TG++                     AI A +
Sbjct: 197 GICSEDDYEYKAKAQVCRECDS---VVKVTGFQDVNPQDEHALKVAVAQQPVSVAIEADQ 253

Query: 261 YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR--N 318
            AFQ Y  GVF+  CG +L+HGV  VGYG D+G K+W VKNSWG SWGE GYIR+AR  N
Sbjct: 254 KAFQFYKSGVFNLTCGTRLDHGVLAVGYGNDNGHKFWKVKNSWGASWGEQGYIRLAREEN 313

Query: 319 SPSSNIGICGILMQASYP 336
            P+   G CGI    SYP
Sbjct: 314 GPA---GQCGIASVPSYP 328


>gi|330805275|ref|XP_003290610.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
 gi|325079249|gb|EGC32858.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
          Length = 334

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/343 (37%), Positives = 182/343 (53%), Gaps = 42/343 (12%)

Query: 25  LRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           +R AV  +  L +L I   A +      +  Q+ +  F  W+K++++ Y    E+  ++ 
Sbjct: 1   MRLAVFLIVSLVILSINVCAAT----NLFSAQTYQTSFLGWMKKHNKAY-HHHEFNDKYQ 55

Query: 85  IYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL-- 142
            +  N+ +I   NS+     L  N+FADL+NEE+  TYLG +   N  R   V   GL  
Sbjct: 56  TFKDNMDFIHNWNSKESDTVLGLNRFADLTNEEYKKTYLGMSINVN-LRANQVPMNGLNF 114

Query: 143 -----PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
                P+S+DWR+ GAV  VKDQG CGSCWAF+   AVEG +++KTG +V+ SEQ LVDC
Sbjct: 115 ERFTGPSSIDWRQNGAVAYVKDQGHCGSCWAFATTGAVEGAHQIKTGNMVTFSEQHLVDC 174

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                N GC+GG M  AF++I    G+ TE+ YPY    +RC  + T      I+GY+ +
Sbjct: 175 SGRYGNNGCDGGLMTSAFKYIIDNDGIATEEAYPYTATQNRCVYNTTM-LGTAISGYKDV 233

Query: 258 P----------------------ARYAFQLYSHGVFDEYC--GHQLNHGVTVVGYGEDHG 293
           P                      +   FQLY  GV+ E     ++LNHGV  VGYG   G
Sbjct: 234 PRGSESALTAAISKQPVAVAIDASPITFQLYKSGVYQEATCSSYRLNHGVLAVGYGTLEG 293

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           + Y++VKNSW  +WG  GYI MARN+ +     CGI   ASY 
Sbjct: 294 KDYYIVKNSWAETWGNQGYILMARNANNH----CGIATMASYA 332


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 183/317 (57%), Gaps = 47/317 (14%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS-----FKLTDNKFA 111
           S +E+++N+   +S+ Y +  E +RRF I+ SN+  I+  N QN S     +++  NKFA
Sbjct: 18  SDKEKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHN-QNFSRGLSTYEMGVNKFA 76

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSC 166
           DL+ EEF+  +    K   +P++ S Q        LPA VDW K+GAVT VK QG CGSC
Sbjct: 77  DLTPEEFMERFRPLRK--TKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGSC 134

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS   +VE  N +KTGKL+SLSEQ+LVDC  N  N GC GG+M+ A E+I +  G+ +
Sbjct: 135 WAFSTTGSVESHNFIKTGKLISLSEQQLVDCVKN--NSGCAGGWMDIALEYI-EADGIMS 191

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQ 264
           EDDYPY  +N  C+ + +K  AV I  Y+AI                          AFQ
Sbjct: 192 EDDYPYEERNTTCRFNNSK-AAVQIKSYKAIKKNDEIDLQKAVALEGPVSVAIEVTIAFQ 250

Query: 265 LYSHGVF-DEYCGH---QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           LY+ G+  D  C +    L H V V GYG   G+ YW+VKNSWG  +G  GY+RM+RN+ 
Sbjct: 251 LYARGILNDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNAD 310

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI  +ASYPV
Sbjct: 311 NQ----CGIATRASYPV 323


>gi|159485468|ref|XP_001700766.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
 gi|158281265|gb|EDP07020.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
          Length = 498

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/324 (41%), Positives = 173/324 (53%), Gaps = 54/324 (16%)

Query: 59  EERFENWLKQYSREYG-SEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEE 117
           E  F  W  Q++R Y     E+ RR G+++ NV+ I   N +N    L  N++AD + EE
Sbjct: 37  ERAFGLWATQHARTYSEGSPEYTRRLGVFADNVRAIAEQNRRNTGITLALNEYADETWEE 96

Query: 118 FISTYLGYNKPYNEP---------------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
           F +  LG      +                R+  VQ    PA+VDWR + AVT VK+QGQ
Sbjct: 97  FAAKRLGLKISQEQLKAREARSSSSSSSSWRYAQVQ---TPAAVDWRAKNAVTQVKNQGQ 153

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFSAV ++EG N L TG+LV+LSEQ+LVDCD  S N GC+GG M+ AF+++   G
Sbjct: 154 CGSCWAFSAVGSIEGANALATGQLVALSEQQLVDCDTAS-NMGCSGGLMDDAFKYVLDNG 212

Query: 223 GVTTEDDYPYRGK-------NDRCQTDKTKHHAVTITGYEAIP----------------- 258
           G+ TE+DY Y          N R QTD+    AV+I GYE +P                 
Sbjct: 213 GIDTEEDYSYWSGYGFGFWCNKRKQTDRP---AVSIDGYEDVPTSEPALLKAVAGQPVAV 269

Query: 259 ---ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIR 314
              A    Q YS GV +  C   LNHGV  VGY   D  + YW+VKNSWG SWGE GY R
Sbjct: 270 AICASANMQFYSSGVINSCC-EGLNHGVLAVGYDTSDKAQPYWIVKNSWGGSWGEQGYFR 328

Query: 315 MARNSPSSNIGICGILMQASYPVK 338
           +         G+CGI   ASY VK
Sbjct: 329 LKMGEGPK--GLCGIASAASYAVK 350


>gi|303283194|ref|XP_003060888.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457239|gb|EEH54538.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 422

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 178/326 (54%), Gaps = 43/326 (13%)

Query: 54  DP-QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFK----LTDN 108
           DP  ++E RF+ WL  + + Y    E  +R  I++ N +++   N  + + K    L  N
Sbjct: 61  DPVATIEARFDRWLATHGKAYACPKERAKRLAIFADNAEFVRVHNEAHAAGKKSHWLRLN 120

Query: 109 KFADLSNEEFISTYLGYN--KPYNEPRWPSV-----QYLGL--PASVDWRKEGAVTPVKD 159
             ADL+ EEF    LGY+  K   E   P V     +Y  +  P ++DW   GAVTPVK+
Sbjct: 121 HLADLTREEF-KHMLGYDASKKRVESSSPPVDAANWEYADVTPPETMDWVSRGAVTPVKN 179

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QGQCGSCWAFS V AVEG+  +KTG L+SLSEQELV C     N GC GG M+  FE+I 
Sbjct: 180 QGQCGSCWAFSTVGAVEGVVAVKTGDLISLSEQELVSCAKIGGNNGCKGGLMDNGFEWIV 239

Query: 220 KIGGVTTEDDYPYRGKNDRCQ-TDKTKHHAVTITGYEAIPA------------------- 259
           +  GV  E+D+ Y  K+ RC    K +  A +I G++ +P                    
Sbjct: 240 ENRGVDDEEDWGYLAKDRRCNWFKKRRAKAASIDGFKDVPRNDEDALKKAVSQQPVAVAI 299

Query: 260 ---RYAFQLYSHGVFDEYCGHQLNHGVTVVGY---GEDHGEK-YWLVKNSWGTSWGEAGY 312
                 FQLYS GVFD  CG  L+HGV VVGY   GE  G K YW VKNSWG  WGE GY
Sbjct: 300 EADHREFQLYSGGVFDGECGTNLDHGVLVVGYGYDGESAGHKHYWTVKNSWGAKWGEEGY 359

Query: 313 IRMARNSPSSNIGICGILMQASYPVK 338
           IR+AR       G CG+ MQASYP K
Sbjct: 360 IRIARGG-MGPAGQCGVAMQASYPTK 384


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 177/311 (56%), Gaps = 42/311 (13%)

Query: 63  ENWLK---QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ---NLS-FKLTDNKFADLSN 115
           E W++   + ++ Y +  E Q+RF I+  +++ I+  N +    LS FKL   KFADL+ 
Sbjct: 21  EEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTE 80

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYL----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           +EF S  LG ++     R   +  L     LP+  DWR++GAVT VKDQG CGSCW+FS 
Sbjct: 81  KEF-SDMLGISRSTKSSRPRVIHSLTPVKDLPSKFDWREKGAVTEVKDQGSCGSCWSFST 139

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
              VEG   LKTGKLVSLSEQ LVDC    +  GC+GGYM+KA E+I   GG+ +E+DYP
Sbjct: 140 TGTVEGAYFLKTGKLVSLSEQNLVDC-AKEDCYGCSGGYMDKALEYIETAGGIMSENDYP 198

Query: 232 YRGKNDRCQTDKTK-------------------HHAVTITG--YEAIPARYAFQLYSHGV 270
           Y G +D+C+ D +K                    +AV   G    AI A + FQLY  G+
Sbjct: 199 YEGIDDKCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAIDASFNFQLYDSGI 258

Query: 271 FDEYCGH----QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
            D+   +     LNHGV VVGYG +  + YW+VKNSWG  WG  GYI M+RN  +     
Sbjct: 259 LDDSSCYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWGMDGYIWMSRNKNNQ---- 314

Query: 327 CGILMQASYPV 337
           CGI   A+YP 
Sbjct: 315 CGIATDATYPT 325


>gi|32394728|gb|AAM96000.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 322

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 176/302 (58%), Gaps = 37/302 (12%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYL 123
           QY R YG+  E   R  ++  N Q+I+  N++     ++F L  N+F D+++EEF +T  
Sbjct: 25  QYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEEFAATMN 84

Query: 124 GY-NKPYNEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
           G+ N P   P          LP  VDWR +GAVTPVKDQ QCGSCWAFS   ++EG + L
Sbjct: 85  GFLNVPTRHPVAILEADDETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFL 144

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
           K GKLVSLSEQ LVDC     N GC GG M++AF++I +  G+ TE+ YPY  ++ +C+ 
Sbjct: 145 KDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDGKCRF 204

Query: 242 DKTKHHAVTITGY----------------------EAIPARY-AFQLYSHGVF--DEYCG 276
           D +   A T TG+                       AI A + +FQ Y  GV+   E   
Sbjct: 205 DSSNVGA-TDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSS 263

Query: 277 HQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
             L+HGV  +GYGE D G++YWLVKNSW TSWG+ G+I+M+RN  ++    CGI  QASY
Sbjct: 264 TMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNN----CGIASQASY 319

Query: 336 PV 337
           P+
Sbjct: 320 PL 321


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 170/310 (54%), Gaps = 39/310 (12%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEE 117
           +E+W  +Y + Y    E   R  ++ SN+Q +   N        +++L  N +ADL NEE
Sbjct: 19  WESWKGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADLYNEE 78

Query: 118 FI-----STYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           F+     S  L      +   +  +  + LP+SVDWR +G VTPVKDQGQCGSCW+FSA 
Sbjct: 79  FMALKGSSGILQAKDQSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWSFSAT 138

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            ++EG +  KTG LVSLSEQ+LVDC  +  N GC+GG ME A+++I   GGV  E  YPY
Sbjct: 139 GSLEGQHFAKTGTLVSLSEQQLVDCSWSYGNYGCSGGLMESAYDYIRDAGGVQLESAYPY 198

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHG 269
             +N RC  D++K  A T TG+ AIP                       + Y FQLY  G
Sbjct: 199 TAQNGRCHFDQSKAVA-TCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASGYDFQLYESG 257

Query: 270 VFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V+D        L+HGV   GYG + G  YWLVKNSWG  WG  GYI+M+RN  +     C
Sbjct: 258 VYDRSRCSSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQGYIKMSRNKSNQ----C 313

Query: 328 GILMQASYPV 337
           GI   A YP+
Sbjct: 314 GIATMACYPL 323


>gi|32394730|gb|AAM96001.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 306

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 176/302 (58%), Gaps = 37/302 (12%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYL 123
           QY R YG+  E   R  ++  N Q+I+  N++     ++F L  N+F D+++EEF +T  
Sbjct: 9   QYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEEFAATMN 68

Query: 124 GY-NKPYNEP-RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
           G+ N P   P          LP  VDWR +GAVTPVKDQ QCGSCWAFS   ++EG + L
Sbjct: 69  GFLNVPTRHPVAILEADDETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFL 128

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
           K GKLVSLSEQ LVDC     N GC GG M++AF++I +  G+ TE+ YPY  ++ +C+ 
Sbjct: 129 KDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDGKCRF 188

Query: 242 DKTKHHAVTITGY----------------------EAIPARY-AFQLYSHGVF--DEYCG 276
           D +   A T TG+                       AI A + +FQ Y  GV+   E   
Sbjct: 189 DSSNVGA-TDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSS 247

Query: 277 HQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
             L+HGV  +GYGE D G++YWLVKNSW TSWG+ G+I+M+RN  ++    CGI  QASY
Sbjct: 248 TMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNN----CGIASQASY 303

Query: 336 PV 337
           P+
Sbjct: 304 PL 305


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 174/315 (55%), Gaps = 41/315 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           + + ++ W +  ++ Y   +E  RR   +  N+Q +   N Q      ++ L  NK+AD+
Sbjct: 24  LNQHWKLWKEANNKRYSDAEEHVRR-ATWEGNLQKVQEHNLQADLGVHTYWLGMNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQY------LGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           +  EF+    GYN      R            + LP +VDWR +G VT VKDQGQCGSCW
Sbjct: 83  TVTEFVKVMNGYNATMRGQRTQDRHTFSFNSKIALPDTVDWRDKGYVTDVKDQGQCGSCW 142

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   A+EG +  +TGKLVSLSEQ LVDC     N GCNGG M++AFE+I +  G+ TE
Sbjct: 143 AFSTTGALEGQHFKQTGKLVSLSEQNLVDCSGKQGNMGCNGGLMDQAFEYIKENNGIDTE 202

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-----------------------YAFQ 264
           D YPY   +++C+  K  +   T TG+  I ++                        +FQ
Sbjct: 203 DSYPYEAVDNQCRF-KAANVGATDTGFTDITSKDESALQQAVATVGPISVAIDAGHTSFQ 261

Query: 265 LYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
           LY HGV++E +C   +L+HGV  VGYG D G+ YWLVKNSWG  WG+ GYI+M RN  + 
Sbjct: 262 LYKHGVYNEPFCSQTRLDHGVLAVGYGTDSGKDYWLVKNSWGEGWGDKGYIKMTRNKRNQ 321

Query: 323 NIGICGILMQASYPV 337
               CGI   ASYP+
Sbjct: 322 ----CGIATAASYPL 332


>gi|326430491|gb|EGD76061.1| cathepsin [Salpingoeca sp. ATCC 50818]
          Length = 381

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/277 (42%), Positives = 164/277 (59%), Gaps = 38/277 (13%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEE 117
           F+++   + ++Y S +E  RRF I++ N+ +I   N++      +  +  N+FADL+NEE
Sbjct: 20  FDDFKTTFEKQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEE 79

Query: 118 FISTYLGYNKPYNEP---RWPSVQYLGLP--ASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
           +   YL   +PY      R     +L  P   SVDWR++GAVTP+K+QGQCGSCW+FS  
Sbjct: 80  YRQLYL---RPYPTELLGRERQEVWLDGPNAGSVDWRQKGAVTPIKNQGQCGSCWSFSTT 136

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            +VEG + + TG LVSLSEQ+LVDC  +  NQGCNGG M+ AF++I   GG+ TE DYPY
Sbjct: 137 GSVEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPY 196

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYAFQLYSHGV 270
             ++  C   K   HAV+I+GY+ +P                       + +FQ+YS GV
Sbjct: 197 TARDGVCDKSKESKHAVSISGYKDVPQNNEDQLAAAVEKGPVSVAIEADQQSFQMYSSGV 256

Query: 271 FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSW 307
           F   CG  L+HGV VVGY  D    YW+VKNSWG SW
Sbjct: 257 FSGPCGTNLDHGVLVVGYTSD----YWIVKNSWGASW 289


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 181/320 (56%), Gaps = 45/320 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS---QNL-SFKLTDNKFADL 113
           ++E++ ++  Q+ ++Y SE E + R  I+  N   +   N    Q L  +KL  NK+ DL
Sbjct: 23  VQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQGLYPYKLAMNKYGDL 82

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQ---------YLGLPASVDWRKEGAVTPVKDQGQCG 164
            + EF+    G+N+     +   +Q         ++ +P +VDWR+EGAVTPVKDQG CG
Sbjct: 83  LHHEFVGLLNGFNRTKTYLKRGELQDSITFIEPAHVDIPDTVDWRQEGAVTPVKDQGHCG 142

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FSA  A+EG +  +T KLVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 143 SCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRFGNNGCNGGLMDNAFRYIKNNGGI 202

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY G++++ +    K+   T  G+  IP                       +  
Sbjct: 203 DTEAAYPYMGEDEKFRY-SAKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIAIDASHE 261

Query: 262 AFQLYSHGVF-DEYCGH-QLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMAR 317
           +FQLYS+GV+ D  C   +L+HGV VVGYG D   G  YWLVKNSWG +WG  GYI+MAR
Sbjct: 262 SFQLYSNGVYSDPTCSSTELDHGVLVVGYGTDEKTGMDYWLVKNSWGDTWGLDGYIKMAR 321

Query: 318 NSPSSNIGICGILMQASYPV 337
           N  +     CG+  QASYP+
Sbjct: 322 NQDNQ----CGVATQASYPL 337


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 175/314 (55%), Gaps = 39/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S  E   RF I++ N   I   N++     +S+KL  N+F DL
Sbjct: 23  LRTQWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDL 82

Query: 114 SNEEFISTYLGYN---KPYNEPRWP--SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              EF   + G++   K       P  +V    LP +VDWRK+GAVTPVKDQGQCGSCWA
Sbjct: 83  LAHEFARIFNGHHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWA 142

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  ++EG + LK G+LVSLSEQ LVDC  +  N GC GG ME AF++I    G+ TE 
Sbjct: 143 FSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEK 202

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQL 265
            YPY   +  C+  K    A T TGY  I A                         +FQL
Sbjct: 203 SYPYEAVDGECRFKKEDVGA-TDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQL 261

Query: 266 YSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE  C  + L+HGV VVGYG   G+KYWLVKNSW  SWG+ GYI M+R+    N
Sbjct: 262 YSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRD----N 317

Query: 324 IGICGILMQASYPV 337
              CGI  QASYP+
Sbjct: 318 NNQCGIASQASYPL 331


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 187/348 (53%), Gaps = 51/348 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR +VL      ++ +   A S+        + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRLSVLCA----IVAVTVAASSQ--------EILRTQWEAFKTTHKKTYQSHMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWP- 135
            I++ N   I   N++     +S+KL  N+F DL   EF   + GY+   K       P 
Sbjct: 49  KIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNGYHGSRKSGGSTFLPP 108

Query: 136 -SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    LP +VDWRK+GAVTPVKDQGQCGSCWAFS   ++EG + LK G+LVSLSEQ L
Sbjct: 109 ANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKNGELVSLSEQNL 168

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC  +  N GC GG ME AF++I    G+ TE  YPY   +  C+  K    A T TGY
Sbjct: 169 VDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGA-TDTGY 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG 289
             I A                         +FQLYS GV+DE  C  + L+HGV VVGYG
Sbjct: 228 VEIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYG 287

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G+KYWLVKNSW  SWG+ GYI M+R+    N   CGI  QASYP+
Sbjct: 288 VKGGKKYWLVKNSWAESWGDQGYILMSRD----NNNQCGIASQASYPL 331


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 197/368 (53%), Gaps = 56/368 (15%)

Query: 8   AIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLK 67
            ++    L   ++M + L   +LSL L      P          + DP  ++  ++ W  
Sbjct: 3   VLFLARRLSRFVNMNVCL--TILSLCLGLAFAAP----------RVDP-DLDSHWQLWKS 49

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYL 123
            +S++Y   +E  RR  ++  N++ I+  N  +     S+KL  N+F D++ EEF     
Sbjct: 50  WHSKDYHEREESWRRV-VWEKNLKMIELHNLDHSLGKHSYKLGMNQFGDMTAEEFRQLMN 108

Query: 124 GYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGI 178
           GY    +E ++   Q+L       P SVDWR++G VTPVKDQGQCGSCWAFS   A+EG 
Sbjct: 109 GYKHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQ 168

Query: 179 NKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR 238
           +  KTGKLVSLSEQ LVDC     NQGCNGG M++AF+++   GG+ +E+ YPY  K+D 
Sbjct: 169 HFRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDE 228

Query: 239 CQTDKTKHHAVTITGYEAIPARY-----------------------AFQLYSHGVFDE-- 273
               K +++A   TG+  IP  +                       +FQ Y  G++ E  
Sbjct: 229 DCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPD 288

Query: 274 YCGHQLNHGVTVVGY---GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
                L+HGV VVGY   GED  G+KYW+VKNSWG  WG+ GYI MA++  +     CGI
Sbjct: 289 CSSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNH----CGI 344

Query: 330 LMQASYPV 337
              ASYP+
Sbjct: 345 ATAASYPL 352


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 187/348 (53%), Gaps = 51/348 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR +VL      ++ +   A S+        + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRLSVLCA----IVAVTVAASSQ--------EILRTQWEAFKTTHKKTYQSHMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWP- 135
            I++ N   I   N++     +S+KL  N+F DL   EF   + G+    K       P 
Sbjct: 49  KIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNGHRGTRKTGGSTFLPP 108

Query: 136 -SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    LP +VDWRK+GAVTPVKDQGQCGSCWAFSA  ++EG + LK G+LVSLSEQ L
Sbjct: 109 ANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNL 168

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC  +  N GC GG ME AF++I    G+ TE  YPY   +  C+  K    A T TGY
Sbjct: 169 VDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGA-TDTGY 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG 289
             I A                         +FQLYS GV+DE  C  + L+HGV VVGYG
Sbjct: 228 VEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYG 287

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G+KYWLVKNSW  SWG+ GYI M+R+    N   CGI  QASYP+
Sbjct: 288 VKGGKKYWLVKNSWAESWGDQGYILMSRD----NNNQCGIASQASYPL 331


>gi|327263389|ref|XP_003216502.1| PREDICTED: cathepsin L1-like [Anolis carolinensis]
          Length = 339

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 182/320 (56%), Gaps = 44/320 (13%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFAD 112
           ++++ ++ W   +S++Y  ++E  RR  I+  N++ I   N  +     S++L  N F D
Sbjct: 24  ALDDHWQAWKTWHSKKYHQQEEGWRRM-IWEKNLKMIQLHNLDHSLGKHSYRLGMNHFGD 82

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCW 167
           ++NEEF     GY     E ++   ++L      +P SVDWR++G VTPVKDQGQCGSCW
Sbjct: 83  MTNEEFRQVMNGYKHSKTEKKYRGSEFLEPNFLVVPKSVDWREKGYVTPVKDQGQCGSCW 142

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   ++EG +  KTGKLVSLSEQ LVDC     NQGCNGG M++AFE+I   GG+ +E
Sbjct: 143 AFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFEYIADNGGIDSE 202

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQ 264
           + YPY  K+D     K++ +A   TG+  +P                       +   FQ
Sbjct: 203 ESYPYIAKDDEDCLYKSEFNAANDTGFVDVPEGHERALMKAVAAVGPVSVAIDASHSTFQ 262

Query: 265 LYSHGV-FDEYC-GHQLNHGVTVVGYG-----EDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
            Y  G+ +D  C   +L+HGV VVGYG     +D+ +KYW+VKNSW   WG+ GYI MA+
Sbjct: 263 FYESGIYYDPDCSSEELDHGVLVVGYGFEGTDDDNKKKYWIVKNSWSDKWGDKGYILMAK 322

Query: 318 NSPSSNIGICGILMQASYPV 337
           +  +     CGI   ASYP+
Sbjct: 323 DRNNH----CGIATAASYPL 338


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 173/306 (56%), Gaps = 40/306 (13%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYL 123
           ++ + Y SE E   R  IY  N   I   N +     + + +  N+F D+ + EF+ST  
Sbjct: 33  KHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHEFVSTRN 92

Query: 124 GYNKPY-NEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           G+ + Y ++PR  S       ++   LP +VDWR +GAVTPVK+QGQCGSCWAFSA  ++
Sbjct: 93  GFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSATGSL 152

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  K+G +VSLSEQ LVDC  +  N GC GG M+ AF++I    G+ TE  YPY G 
Sbjct: 153 EGQHFRKSGSMVSLSEQNLVDCSTDFGNNGCEGGLMDNAFKYIRANKGIDTEKSYPYNGT 212

Query: 236 NDRCQTDKTK-------------------HHAVTITG--YEAIPARY-AFQLYSHGVFDE 273
           +  C   K+                      AV   G    AI A + +FQ YS GV+DE
Sbjct: 213 DGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYDE 272

Query: 274 -YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C  + L+HGV VVGYG  +G  YWLVKNSWGT+WG+ GYIRM+RN  +     CGI  
Sbjct: 273 PECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMSRNKKNQ----CGIAS 328

Query: 332 QASYPV 337
            ASYP+
Sbjct: 329 SASYPL 334


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 174/307 (56%), Gaps = 44/307 (14%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYI-----DYINSQNLSFKLTDNKFADLSNEEFISTYL 123
           + +EY S+ E   R  IY  N   I      Y  SQ +S+KL  N+F D+ + EF+ST  
Sbjct: 30  HGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQ-VSYKLAMNEFGDMLHHEFVSTRN 88

Query: 124 GYNKPYNE-PRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           G+ + Y + PR  S       ++   LP +VDWRK+GAVTPVK+QGQCGSCW+FS   ++
Sbjct: 89  GFKRNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPVKNQGQCGSCWSFSTTGSL 148

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  K  KLVSLSEQ L+DC  +  N GC GG M+ AF++I    G+ TE  YPY   
Sbjct: 149 EGQHFRKLHKLVSLSEQNLIDCSRSFGNNGCEGGLMDYAFKYIKANKGIDTEQSYPYNAT 208

Query: 236 NDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFD 272
           +  C  +K+   A T TG+  IP                       +  +FQ YS GV+D
Sbjct: 209 DGVCHFNKSAVGA-TDTGFVDIPEGDENKLKKAVATVGPVSVAIDASHESFQFYSEGVYD 267

Query: 273 E-YC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
           E  C   QL+HGV VVGYG   G+ YWLVKNSWGT+WG+ GYI M+RN  +     CGI 
Sbjct: 268 EPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGGYIYMSRNKDNQ----CGIA 323

Query: 331 MQASYPV 337
             ASYP+
Sbjct: 324 SAASYPL 330


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 175/314 (55%), Gaps = 39/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S  E   RF I++ N   I   N++     +S+KL  N+F DL
Sbjct: 23  LRTQWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDL 82

Query: 114 SNEEFISTYLGYN---KPYNEPRWP--SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              EF   + G++   K       P  +V    LP  VDWRK+GAVTPVKDQGQCGSCWA
Sbjct: 83  LAHEFARIFNGHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWA 142

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  ++EG + LK G+LVSLSEQ LVDC  +  N GC GG ME AF++I    G+ TE 
Sbjct: 143 FSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEK 202

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQL 265
            YPY+  +  C+  K    A T TGY  I A                         +FQL
Sbjct: 203 SYPYKAVDGECRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQL 261

Query: 266 YSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE  C  + L+HGV VVGYG   G+KYWLVKNSW  SWG+ GYI M+R+    N
Sbjct: 262 YSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRD----N 317

Query: 324 IGICGILMQASYPV 337
              CGI  QASYP+
Sbjct: 318 NNQCGIASQASYPL 331


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 187/347 (53%), Gaps = 49/347 (14%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           +  +L +L + A A +  Y +      ++E +  +  ++ + Y  E E + R  I++ N 
Sbjct: 3   TALILPLLALVAVAQAVSYAE-----VIQEEWHTFKLEHRKNYQDETEERFRLKIFNENK 57

Query: 91  QYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLGYN-----------KPYNEPRWP 135
             I   N    +  +SFK+  NK+AD+ + EF ST  G+N           + +    + 
Sbjct: 58  HKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFNYTLHKQLRNADESFKGVTFI 117

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
           S +++ LP  VDWR +GAVT VKDQG CGSCWAFS+  A+EG +  K+G LVSLSEQ LV
Sbjct: 118 SPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLV 177

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ--------------- 240
           DC     N GCNGG M+ AF +I   GG+ TE  YPY   +D C                
Sbjct: 178 DCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFVD 237

Query: 241 ----TDKTKHHAVTITGYEAI---PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGED 291
                +K    AV   G  A+    +  +FQ YS GV++E  C  Q L+HGV VVG+G D
Sbjct: 238 IPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACDAQNLDHGVLVVGFGTD 297

Query: 292 H-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             G+ YWLVKNSWGT+WG+ G+I+M RN  +     CGI   +SYP+
Sbjct: 298 ESGQDYWLVKNSWGTTWGDKGFIKMLRNKENQ----CGIASASSYPL 340


>gi|306992173|gb|ADN19567.1| cathepsin L-like proteinase [Spodoptera frugiperda]
          Length = 344

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 176/326 (53%), Gaps = 51/326 (15%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           + E +  +  ++S++Y SE E + R  IY  N   I   N +     +S+KL  NK+AD+
Sbjct: 23  VREEWNAFKMEHSKQYDSEVEDKFRMKIYVENKHRIAKHNQRFEQRLVSYKLKPNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNE----------------PRWPSVQYLGLPASVDWRKEGAVTPV 157
            + EF+ T  G+NK                      + +  ++  P  VDWRK+GAVT V
Sbjct: 83  LHHEFVHTMNGFNKTAKHGGRNKAVHSKGRDGRAATFIAPAHVSYPDHVDWRKKGAVTDV 142

Query: 158 KDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEF 217
           KDQG+CGSCWAFS   A+EG +  KTG LVSLSEQ LVDC     N GCNGG M+ AF++
Sbjct: 143 KDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLVDCSAAYGNNGCNGGLMDNAFKY 202

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------------------- 258
           I   GG+ TE  YPY   +D+C+ +  K+      G+  IP                   
Sbjct: 203 IKDNGGIDTEKSYPYEAVDDKCRYN-PKNSGADDVGFVDIPQGDEEKLMQAVATVGPISV 261

Query: 259 ----ARYAFQLYSHGV-FDEYCGH-QLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAG 311
               ++  FQ YS GV +DE C    L+HGV VVGYG E+ G  YWLVKNSWG SWGE G
Sbjct: 262 AIDASQETFQFYSKGVYYDENCSSTDLDHGVMVVGYGTEEEGGDYWLVKNSWGRSWGELG 321

Query: 312 YIRMARNSPSSNIGICGILMQASYPV 337
           YI+MA N  +     CGI   ASYP+
Sbjct: 322 YIKMAHNKNNH----CGIASSASYPL 343


>gi|389608655|dbj|BAM17937.1| cathepsin L [Papilio xuthus]
          Length = 341

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 178/323 (55%), Gaps = 48/323 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           ++E +  +  ++ ++Y SE E + R  IY+ N   I   N +     +SF+L  NK+ D+
Sbjct: 23  VKEEWNAFKMEHQKQYDSEVEDKFRMKIYAENKHNIAKHNQKYARGEVSFRLKQNKYGDM 82

Query: 114 SNEEFISTYLGYNKPYNEPR-------------WPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            + EF+ T  G+NK     +             + +   + LP  VDWRK GAVT VKDQ
Sbjct: 83  LHHEFVHTMNGFNKTTKNSKGLFGKSAGERGATFITPANVHLPDHVDWRKHGAVTEVKDQ 142

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCW+FS+  A+EG +  +T  LVSLSEQ L+DC     N GCNGG M+ AF++I  
Sbjct: 143 GKCGSCWSFSSTGALEGQHYRRTNILVSLSEQNLIDCSAAYGNNGCNGGLMDNAFKYIKD 202

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------- 258
             G+ TE  YPY G +D+C+ +  K+      G+  IP                      
Sbjct: 203 NRGIDTEKSYPYEGIDDKCRYN-PKNTGADDNGFVDIPSGDEGKLMAAVATVGPVSVAID 261

Query: 259 -ARYAFQLYSHGV-FDEYC-GHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIR 314
            ++ +FQ YS GV FDE C    L+HGV VVGYG D +G  YWLVKNSWG SWG+ GYI+
Sbjct: 262 ASQSSFQFYSDGVYFDENCSSSSLDHGVLVVGYGTDENGGDYWLVKNSWGRSWGDLGYIK 321

Query: 315 MARNSPSSNIGICGILMQASYPV 337
           MARN  +     CGI   ASYP+
Sbjct: 322 MARNRDNH----CGIATAASYPL 340


>gi|413953048|gb|AFW85697.1| hypothetical protein ZEAMMB73_051316 [Zea mays]
          Length = 298

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/297 (44%), Positives = 170/297 (57%), Gaps = 45/297 (15%)

Query: 85  IYSSNVQYIDYIN--SQNLSFKLTDNKFADLSNEEFISTYL---GYNKPYNEPRWPSVQY 139
           +YS NV++I  +N  S   S++L +N+F DL+ EEF  TYL       P  E   P+V  
Sbjct: 2   VYSENVRFIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMPPTVGT 61

Query: 140 LGL------------PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
           +              P SVDWR +GAVTPVK+Q QCGSCWAF+ VA++EG++++KTG+LV
Sbjct: 62  MSTAGMSNGDNTGEAPNSVDWRTKGAVTPVKNQQQCGSCWAFATVASIEGVHQIKTGRLV 121

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ++VDCD    + GC+GGY   A E++T+ GG+TTE DYPY G   +C + K  H 
Sbjct: 122 SLSEQQIVDCDRGGNDHGCHGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHQ 181

Query: 248 AVTITGYEA---------------------IPARYAFQLYSHGVFDEYCG-HQLNHGVTV 285
           A  I GY+A                     I A  AFQ Y  GVF   C    +NH VTV
Sbjct: 182 AARIRGYQAVQRKNEAELERAVAGRPVAVVIDASRAFQFYKRGVFSGPCNTTTVNHAVTV 241

Query: 286 V-----GYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           V     G     G KYW+VKNSWG  WGE GY+RMAR   +   G+C I ++  YPV
Sbjct: 242 VGYGSTGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRARE-GMCAIAIEPYYPV 297


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 187/337 (55%), Gaps = 40/337 (11%)

Query: 33  FLLWVLGI-PAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           F+ W++G+ P  +++     K DP +++  +  W K YS++Y  E+E   R  I+  N++
Sbjct: 8   FMKWLVGLLPLCSYAVAQVHK-DP-TLDHHWNLWKKTYSKQYKEENEEVARRLIWEKNLK 65

Query: 92  YIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPA 144
           ++   N ++     S+ L  N   D++ EE IS       P    R   + S     LP 
Sbjct: 66  FVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKLPD 125

Query: 145 SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-EN 203
           SVDWR++G VT VK QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC      N
Sbjct: 126 SVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGN 185

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----- 258
           +GCNGG+M  AF++I    G+ +E  YPY+  N +C+ D +K  A T + Y  +P     
Sbjct: 186 KGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYD-SKKRAATCSKYTELPFGSED 244

Query: 259 ------------------ARYAFQLYSHGVFDE-YCGHQLNHGVTVVGYGEDHGEKYWLV 299
                             + Y+F LY  GV+ E  C   +NHGV VVGYG  +G+ YWLV
Sbjct: 245 ALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLV 304

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           KNSWG ++G+ GYIRMARNS +     CGI    SYP
Sbjct: 305 KNSWGLNFGDQGYIRMARNSGNH----CGIASYPSYP 337


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/356 (39%), Positives = 196/356 (55%), Gaps = 54/356 (15%)

Query: 15  LKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYG 74
           L+++  M+++   AV+ L         A A S       +P ++ + +EN+  +++++Y 
Sbjct: 50  LRVSAGMKLLAVLAVIGL---------ASALSP------NP-NLNQHWENFKAEHNKKYE 93

Query: 75  SEDEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
           S  E   R  I+  N Q+I+  NS+    F L  N F DL+N+E+   YLGY +P N P 
Sbjct: 94  SFPEELMRRLIFEENHQFIEDHNSKKEFDFYLGMNHFGDLTNKEYRERYLGYRRPENTPS 153

Query: 134 WPSVQYL------GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLV 187
             S  +        +P  +DWR +G VTPVK+QGQCGSCWAFSAV ++EG +   TGKLV
Sbjct: 154 KASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQGQCGSCWAFSAVGSLEGQHFKSTGKLV 213

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQ LVDC     N GCNGG+M++AFE++    G+ TED YPY G +  C   K K  
Sbjct: 214 SLSEQNLVDCSTPEGNSGCNGGWMDQAFEYVKDNHGIDTEDSYPYVGTDGSCHF-KNKSI 272

Query: 248 AVTITGY--------EAI--------PARYA-------FQLYSHGVFD-EYCG-HQLNHG 282
             T+ G+        EA+        P   A       FQ Y  GV++  +C   +L+HG
Sbjct: 273 GATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASSMLFQFYRGGVYNVPWCSTSELDHG 332

Query: 283 VTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           V VVGYG+   G+ +W+VKNSWG  WG  GYI M+RN  +     CGI  +AS P 
Sbjct: 333 VLVVGYGKQFQGKDFWMVKNSWGVGWGIYGYIEMSRNKGNQ----CGIASKASIPT 384


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 188/348 (54%), Gaps = 51/348 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR +VL      ++ +   A S+        + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRLSVLCA----IVAVTVAASSQ--------EILRTQWEAFKTTHKKTYQSHMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWP- 135
            I++ N   I   N++     +S+KL  N+F DL   EF   + G++   K       P 
Sbjct: 49  KIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNGHHGTRKTGGSTFLPP 108

Query: 136 -SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    LP  VDWRK+GAVTPVKDQGQCGSCWAFSA  ++EG + LK G+LVSLSEQ L
Sbjct: 109 ANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGRHFLKNGELVSLSEQNL 168

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC  +  N GC GG ME AF++I +  G+ TE  YPY   +  C+  K    A T TGY
Sbjct: 169 VDCSQSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAVDGECRFKKEDVGA-TDTGY 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG 289
             I A                         +FQLYS GV+DE  C  + L+HGV VVGYG
Sbjct: 228 VEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYG 287

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G+KYWLVKNSW  SWG+ GYI M+R+    N   CGI  QASYP+
Sbjct: 288 VKGGKKYWLVKNSWAESWGDQGYILMSRD----NNNQCGIASQASYPL 331


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 175/317 (55%), Gaps = 51/317 (16%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEE 117
           F  +  QY ++Y S+   + R  +Y  N +++   N +     +++K+  N  AD+   E
Sbjct: 23  FTRFKSQYRKDYPSDSVERYRKKVYKQNEKFVREHNERYERGEVTYKMALNHLADMHPRE 82

Query: 118 FISTYLGYNK------------PYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           F++T+LG+N+            P+   +   +Q       VDWR++GA++PVKDQG CGS
Sbjct: 83  FMATFLGFNRSLRATNKVPEGIPFRHNKDAVIQ-----KEVDWRQKGAISPVKDQGHCGS 137

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS+  A+E    LK G+ VSLSEQ L+DC +N  N GC GG ME+AF+++    G+ 
Sbjct: 138 CWAFSSTGALEAHTFLKKGRRVSLSEQNLIDCSLNYGNNGCEGGLMEQAFQYVRDNDGID 197

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYA 262
           TE+ YPY G++  C+  K    A T  G+  IP                       +  +
Sbjct: 198 TEEAYPYEGEDSECRFKKNNVGA-TDAGFVTIPSGDEQALMEAVATQGPLSIAIDASNPS 256

Query: 263 FQLYSHGVF--DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           FQ YS GV+   E    QL+HGV +VGYG +  +KYWLVKNSW   WGE GYI+MARN  
Sbjct: 257 FQFYSEGVYYEPECSSAQLDHGVLLVGYGVEKDQKYWLVKNSWSEQWGENGYIKMARNKD 316

Query: 321 SSNIGICGILMQASYPV 337
           ++    CGI  QAS+P+
Sbjct: 317 NN----CGIATQASFPI 329


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 187/348 (53%), Gaps = 51/348 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR +VL      ++ +   A S+        + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRLSVLCA----IVAVTVAASSQ--------EILRTQWEAFKTTHKKSYQSHMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWP- 135
            I++ N   I   N++     +S+KL  N+F DL   EF   + G++   K       P 
Sbjct: 49  KIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNGHHGTRKTGGSTFLPP 108

Query: 136 -SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    LP  VDWRK+GAVTPVKDQGQCGSCWAFSA  ++EG + LK G+LVSLSEQ L
Sbjct: 109 ANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNL 168

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC  +  N GC GG ME AF++I    G+ TE  YPY   +  C+  K    A T TGY
Sbjct: 169 VDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGA-TDTGY 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG 289
             I A                         +FQLYS GV+DE  C  + L+HGV VVGYG
Sbjct: 228 VEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYG 287

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G+KYWLVKNSW  SWG+ GYI M+R+    N   CGI  QASYP+
Sbjct: 288 VKGGKKYWLVKNSWAESWGDQGYILMSRD----NNNQCGIASQASYPL 331


>gi|293334761|ref|NP_001168296.1| uncharacterized protein LOC100382061 [Zea mays]
 gi|223947281|gb|ACN27724.1| unknown [Zea mays]
          Length = 322

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 172/305 (56%), Gaps = 49/305 (16%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NLSFKLTDNKFADLSNE 116
           M +RF  W   Y+R Y +  E  RRF +Y  N++ I+  N +  LS++L++  F DL++E
Sbjct: 3   MMDRFRAWQATYNRSYLTAAERLRRFEVYRQNMELIEATNRRAELSYQLSETPFTDLTSE 62

Query: 117 EFISTYLGYNK-------------------PYNE--PRWPSVQY---LGLPASVDWRKEG 152
           EF++T+    +                   P ++   +W    Y   L +P SVDWR +G
Sbjct: 63  EFLATHTMSTRLHASEAARRHRELITTHAGPVSDGGRQWNRRNYTTDLDVPESVDWRTKG 122

Query: 153 AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYME 212
           AVT VKDQG CG CW+F+ VAA+EG++K++TG+LVSLSEQE++DC  +  N GC+GG   
Sbjct: 123 AVTTVKDQGACGGCWSFATVAAIEGLHKIRTGQLVSLSEQEVLDCS-SPPNNGCHGGNPA 181

Query: 213 KAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI--------------- 257
            A ++++  GG+TTE DYPY G+  +C+ DK ++H   I G + +               
Sbjct: 182 AAIDWVSANGGLTTESDYPYEGRQGKCKLDKARNHVAKIRGRKLVDQNNEAALEVAVAQQ 241

Query: 258 PARYAF------QLYSHGVFDEYCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGE 309
           P           Q Y  GVF   C  + LNH VT+VGYG E  G KYW+VKNSWG  WGE
Sbjct: 242 PVAVGMNVHPIQQHYKSGVFHGPCDPEDLNHAVTMVGYGAESGGRKYWIVKNSWGEKWGE 301

Query: 310 AGYIR 314
            GY R
Sbjct: 302 KGYFR 306


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/348 (37%), Positives = 189/348 (54%), Gaps = 50/348 (14%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           + LFLL ++ I A A +  + +      + + +  +  ++++ Y ++ E + R  I+  N
Sbjct: 1   MKLFLLLIVAILATAQAISFFE-----LVNQEWTTFKMEHNKVYKNDIEERFRMKIFMDN 55

Query: 90  VQYIDYINS----QNLSFKLTDNKFADLSNEEFISTYLGYNKPYN----EPRWP------ 135
              I   N     + +S+KL  NK+ D+ + EF++T  G+NK  N      R P      
Sbjct: 56  KHKIAKHNGNYEMKKVSYKLKMNKYGDMLHHEFVNTLNGFNKSINTQLRSERLPIGASFI 115

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               + LP +VDWR+ GAVTPVKDQG CGSCW+FSA  A+EG +  +TG L+ LSEQ L+
Sbjct: 116 EPANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLI 175

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC     N GCNGG M++AF++I    G+ TE  YPY  +ND+C+ +     A  + GY 
Sbjct: 176 DCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTYPYEAENDKCRYNAANSGARDV-GYV 234

Query: 256 AIP-----------------------ARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYGE 290
            IP                       +  +FQ YS GV+   E     L+HGV  VGYG 
Sbjct: 235 DIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSENLDHGVLAVGYGT 294

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           D +G+ YWLVKNSWG +WG+ GYI+MARN     +  CGI   ASYP+
Sbjct: 295 DENGQDYWLVKNSWGETWGDNGYIKMARNK----LNHCGIASTASYPL 338


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 177/317 (55%), Gaps = 48/317 (15%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-------SFKLTDNKFA 111
           +E +E + +Q+++ Y  + +  RR  I+ +N++ I   N+ NL       S++L  N FA
Sbjct: 23  DEHWELFKRQHNKTYLQKQDVGRR-AIFEANIKKI---NAHNLLYDLGRSSYRLGLNGFA 78

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSC 166
           D++ +EF   Y G     NE R   +Q+     + +P +VDWR EG VTPVK+QG CGSC
Sbjct: 79  DMTPDEF-EKYRGTRFEANEARVSKLQHRDNRSMHVPDTVDWRTEGYVTPVKNQGVCGSC 137

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS   A+EG +  ++G LVSLSEQ LVDC     N GCNGG M+ AF FI   GG+ T
Sbjct: 138 WAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSAVYGNAGCNGGLMDNAFRFIKDAGGLET 197

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-----------------------YAF 263
           E  YPY GK+  C  D  +     +TG+  +P+R                         F
Sbjct: 198 EKSYPYTGKDGTCHFD-ARGIGAKLTGFVDVPSRDEEALKEAAGVVGPVSVAIDASGQNF 256

Query: 264 QLYSHGVFDEYC--GHQLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           Q Y  GV+DE       L+HGV VVGYG    G+ YWLVKNSWG+SWG++GYI+M+RN  
Sbjct: 257 QFYKDGVYDEITCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQSGYIQMSRNKE 316

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI   ASYP 
Sbjct: 317 NQ----CGIATMASYPT 329


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 187/348 (53%), Gaps = 51/348 (14%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR +VL      ++ +   A S+        + +  ++E +   + + Y S  E   RF
Sbjct: 1   MLRLSVLCA----IVAVTVAASSQ--------EILRTQWEAFKTTHKKTYQSHMEELLRF 48

Query: 84  GIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWP- 135
            I++ N   I   N++     +S+KL  N+F DL   EF   + G++   K       P 
Sbjct: 49  KIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNGHHGTRKTGGSSFLPP 108

Query: 136 -SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
            +V    LP  VDWRK+GAVTPVKDQGQCGSCWAFSA  ++EG + LK G+LVSLSEQ L
Sbjct: 109 ANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNL 168

Query: 195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
           VDC  +  N GC GG ME AF++I    G+ TE  YPY   +  C+  K    A T TGY
Sbjct: 169 VDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGA-TDTGY 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG 289
             I A                         +FQLYS GV+DE  C  + L+HGV VVGYG
Sbjct: 228 VEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYG 287

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              G+KYWLVKNSW  SWG+ GYI M+R+    N   CGI  QASYP+
Sbjct: 288 VKGGKKYWLVKNSWAESWGDQGYILMSRD----NNNQCGIASQASYPL 331


>gi|356517368|ref|XP_003527359.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 332

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/307 (43%), Positives = 170/307 (55%), Gaps = 37/307 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSN 115
           SM ER E  + +Y + Y  +D  +R F     NV YI+  N + N  +K   N+FA    
Sbjct: 34  SMXERHEQRMTRYGKVY--KDPPKRXF---KENVNYIEACNNAANKPYKRGINQFA--PR 86

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
             F              ++ +V     P++VD R++GAVTP+KDQGQCG CWAFSAVAA 
Sbjct: 87  NRFKGHMCSSIIRITTFKFENV--TATPSTVDCRQKGAVTPIKDQGQCGCCWAFSAVAAT 144

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP-YRG 234
           EGI+ L  GKL+SLSEQELVDCD    + GC GG M+ AF+FI +  G+      P Y G
Sbjct: 145 EGIHALSAGKLISLSEQELVDCDTKGVDXGCEGGLMDDAFKFIIQNHGLKHXSQLPLYMG 204

Query: 235 KNDRCQTDKTKHHAVT-ITGYEAIPARYA-----------------------FQLYSHGV 270
            + +C  ++   +A T ITGYE +PA                          FQ Y  GV
Sbjct: 205 VDGKCNANEAAKNAATIITGYEDVPANNEKAHLQKAVANNPVSEAIDASGSDFQFYKSGV 264

Query: 271 FDEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
           F   CG +L+HGVT VGYG  D G +YWLVKNSWGT WGE GYIRM R   S    +CGI
Sbjct: 265 FTGSCGTELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEE-ALCGI 323

Query: 330 LMQASYP 336
            +QASYP
Sbjct: 324 AVQASYP 330


>gi|298705581|emb|CBJ28832.1| Cathepsin L-like proteinase [Ectocarpus siliculosus]
          Length = 553

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/326 (39%), Positives = 178/326 (54%), Gaps = 51/326 (15%)

Query: 61  RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN--LSFKLTDNKFADLSNEEF 118
           RF  W+ Q+   +G++ E+ RR  I++ N   ID  N+ N   +F L+ N+F+ LS +EF
Sbjct: 42  RFRAWMAQHGVTFGTKGEFDRRLKIFAENSDLIDTHNTANDGSTFTLSHNEFSHLSWDEF 101

Query: 119 ISTYLGYNKPYNEP--------RWPSVQYLG------------LPASVDWRKEGAVTPVK 158
             T+ GY +  ++P        R P  +  G            +P  VDW +EGAVTPV+
Sbjct: 102 KETHFGYKRSSDKPKPARQTPERRPMEKVAGGRRRLVELTGSEIPDEVDWVREGAVTPVQ 161

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QG CGSCWAFS + A+EG   L T  L+  SE++LVDCD    ++GC GG ME+AF++I
Sbjct: 162 NQGMCGSCWAFSTIGAMEGAYYLATDDLIKFSEEQLVDCD--KVDKGCFGGDMEQAFDWI 219

Query: 219 TKIGGVTTEDDYPYRG---KNDRCQT-------------------DKTKHHAVTITGYEA 256
            + GGV  ED+YPY G       C T                   D+    A+   G  A
Sbjct: 220 KENGGVCPEDEYPYVGLWPPFKTCATTCTPVEGSQVKEWAQVKATDEALMTALATVGPIA 279

Query: 257 IPA---RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE-DHGEKYWLVKNSWGTSWGEAGY 312
           I     + AFQ YS GV+   CG +L+HGV  VGYG  + G  YW VKNSWG SWG+ GY
Sbjct: 280 IAIEADQMAFQFYSDGVYTAPCGDKLDHGVLAVGYGTWEDGTDYWKVKNSWGDSWGQGGY 339

Query: 313 IRMAR-NSPSSNIGICGILMQASYPV 337
           I + R +S     G CG+L++A YP+
Sbjct: 340 ILLERADSEEDEGGQCGLLIEAIYPI 365


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/362 (38%), Positives = 190/362 (52%), Gaps = 50/362 (13%)

Query: 17  IAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE 76
           IAI + M+  NA + +F+L        A+      +  P++        + ++ + Y  E
Sbjct: 64  IAIVVVMLFVNAFILVFIL----KKRKAYQNLKATEEQPRTSYAATSTHVLEHRKNYLDE 119

Query: 77  DEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLGYN------ 126
            E + R  I++ N   I   N    S  +S+KL  NK+AD+ + EF     G+N      
Sbjct: 120 TEERFRLKIFNENKHKIAKHNQLWASGKVSYKLAVNKYADMLHHEFRQLMNGFNYTLHKE 179

Query: 127 -----KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
                + +    + S +++ LP SVDWR +GAVT VKDQG CGSCWAFS+  A+EG +  
Sbjct: 180 LRAADESFKGVTFISPEHVTLPKSVDWRDKGAVTGVKDQGHCGSCWAFSSTGALEGQHYR 239

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
           K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+ TE  YPY   +D C  
Sbjct: 240 KSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEALDDSCHF 299

Query: 242 DKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE-YCGH 277
           +K    A T  G+  IP                       +  +FQ YS GV+ E  C  
Sbjct: 300 NKGTIGA-TDRGFVDIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEGVYVEPACDA 358

Query: 278 Q-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
           Q L+HGV VVG+G D  G+ YWLVKNSWGT+WG+ G+I+M RN  +     CGI   +SY
Sbjct: 359 QNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNKDNQ----CGIASASSY 414

Query: 336 PV 337
           P+
Sbjct: 415 PL 416


>gi|57118011|gb|AAW34137.1| cysteine protease gp3b [Zingiber officinale]
          Length = 466

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 170/290 (58%), Gaps = 36/290 (12%)

Query: 82  RFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV 137
           R  ++  N++++D  N+       +++L  N+FADL+NEE+ + +L             +
Sbjct: 63  RLEVFKENLRFVDEHNAAADRGEHAYRLGMNRFADLTNEEYRARFLRDLSRLGRSTSGEI 122

Query: 138 --QYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             QY       LP S+DWR++GAV  VK QG+CGSCWAF+A+A VEGIN++ TG L+SLS
Sbjct: 123 SNQYRLREGDVLPDSIDWREKGAVVAVKSQGRCGSCWAFAAIATVEGINQIVTGDLISLS 182

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ+LVDC  ++ N GC GG+  +AF++I   GGV +E+ YPY G N  C T K   H V+
Sbjct: 183 EQQLVDC--STRNHGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNGTCNTTKGNAHVVS 240

Query: 251 ITGYEAIPAR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
           I  Y  +P+                         FQLY  G+F   C   LNHGVTVVGY
Sbjct: 241 IDSYRNVPSNDEKSLQKAVANQPISVGINASGRNFQLYHSGIFTGSCNTSLNHGVTVVGY 300

Query: 289 GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G  +G  YW+VKNSWG SWG++GYI M RN   S+ G CGI +  SYP+K
Sbjct: 301 GTVNGNDYWIVKNSWGESWGDSGYILMERNIAESS-GKCGIAISPSYPIK 349


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 174/314 (55%), Gaps = 39/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S  E   RF I++ N   I   N++     +S+KL  N+F DL
Sbjct: 23  LRTQWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDL 82

Query: 114 SNEEFISTYLGYN---KPYNEPRWP--SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              EF   + G++   K       P  +V    LP  VDWRK+GAVTPVKDQGQCGSCWA
Sbjct: 83  LAHEFARIFNGHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWA 142

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  ++EG + LK G+LVSLSEQ LVDC  +  N GC GG ME AF++I    G+ TE 
Sbjct: 143 FSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEK 202

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQL 265
            YPY   +  C+  K    A T TGY  I A                         +FQL
Sbjct: 203 SYPYEAVDGECRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQL 261

Query: 266 YSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE  C  + L+HGV VVGYG   G+KYWLVKNSW  SWG+ GYI M+R+    N
Sbjct: 262 YSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRD----N 317

Query: 324 IGICGILMQASYPV 337
              CGI  QASYP+
Sbjct: 318 NNQCGIASQASYPL 331


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/352 (39%), Positives = 195/352 (55%), Gaps = 55/352 (15%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           ML  AV++L L   L  P+           DPQ +++ +E W   +S++Y  ++E  RR 
Sbjct: 1   MLPLAVVALCLSAALSAPS----------LDPQ-LDDHWELWKSWHSKKYHEKEEGWRRM 49

Query: 84  GIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSV-- 137
            ++  N++ I+  N ++     S++L  N F D+++EEF     GY +        S+  
Sbjct: 50  -VWEKNLKKIELHNLEHSMGTHSYRLGMNHFGDMTHEEFRQLMNGYKRKAETKARGSLFL 108

Query: 138 --QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
              +L  P SVDWR  G VTPVKDQGQCGSCWAFS   A+EG +  KTGKLVSLSEQ LV
Sbjct: 109 EPNFLEAPKSVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLV 168

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR-CQTDKTKHHAVTITGY 254
           DC     N+GCNGG M++AF+++    G+ +ED YPY G +D+ C  D T +++V  TG+
Sbjct: 169 DCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPT-YNSVNDTGF 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVF--DEYCGHQLNHGVTVVGY- 288
             IP+                         +FQ Y  G++   E    +L+HGV VVGY 
Sbjct: 228 VDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLVVGYG 287

Query: 289 --GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             GED  G+KYW+VKNSW   WG+ GYI MA++  +     CGI   ASYP+
Sbjct: 288 FQGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNH----CGIATAASYPL 335


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/310 (40%), Positives = 176/310 (56%), Gaps = 37/310 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +E +   + + Y ++ E   R  I+ +N + I+  N++     +S+K+  N F DL +
Sbjct: 25  EEWETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEAHNAKYEQGEVSYKMKMNHFGDLMS 84

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
            E  +   G+    N  R   + +     LP SVDWR++GAVTPVKDQGQCGSCW+FSA 
Sbjct: 85  HEIKALMNGFKMTPNTKREGKIYFPSNDKLPKSVDWRQKGAVTPVKDQGQCGSCWSFSAT 144

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            ++EG   LK GKLVSLSEQ L+DC     N GC GG M+KAF++++   G+ TE  YPY
Sbjct: 145 GSLEGQIFLKKGKLVSLSEQNLMDCSKEYGNNGCEGGLMDKAFQYVSDNKGIDTESSYPY 204

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHG 269
             ++  C+  K K    T  GY  IP                       +  +F  YS G
Sbjct: 205 EARDYACRFKKDKVGG-TDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEG 263

Query: 270 VFDE-YC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V++E YC  + L+HGV  VGYG ++G+ YWLVKNSWG SWGE+GYI++ARN  +     C
Sbjct: 264 VYNEPYCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHSNH----C 319

Query: 328 GILMQASYPV 337
           GI   ASYP+
Sbjct: 320 GIASMASYPI 329


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 173/319 (54%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  E E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 57  EEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 116

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N           + +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 117 HEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 176

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 177 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 236

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 237 DTEKSYPYEAIDDSCHFNKGTVGA-TDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHE 295

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  GE YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 296 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN 355

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 356 KENQ----CGIASASSYPL 370


>gi|344275470|ref|XP_003409535.1| PREDICTED: cathepsin S-like isoform 1 [Loxodonta africana]
          Length = 331

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 189/336 (56%), Gaps = 41/336 (12%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           +LLWV  + + A +  +    DP +++  ++ W K YS++Y  ++E   R  I+  N+++
Sbjct: 3   WLLWVALVCSSAMARLHK---DP-TLDNHWDLWKKTYSKQYKEKNEEVARRLIWEKNLKF 58

Query: 93  IDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPAS 145
           +   N ++     S+ L+ N   D+++EE +S       P    R   + S     LP S
Sbjct: 59  VMLHNLEHSMGMHSYDLSMNHLGDMTSEEVMSLMSSLRVPSQWQRNVTFKSNPNQKLPDS 118

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQ 204
           +DWR++G VT VK QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+
Sbjct: 119 LDWREKGCVTDVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSGEKYSNK 178

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D  K+ A T + Y  +P      
Sbjct: 179 GCNGGFMTRAFQYIIDNNGIDSEASYPYKATDGKCQYD-PKNRAATCSKYTELPYGSEDA 237

Query: 259 -----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                            +R +F LY  GV +D  C   +NHGV VVGYG  +G+ YWLVK
Sbjct: 238 LKEAVANKGPVSVGIDASRPSFFLYKSGVYYDPSCTDNVNHGVLVVGYGNLNGKDYWLVK 297

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           NSWG ++GE GYIRMARNS +     CGI    SYP
Sbjct: 298 NSWGLNFGEQGYIRMARNSGNH----CGIASFPSYP 329


>gi|255544115|ref|XP_002513120.1| cysteine protease, putative [Ricinus communis]
 gi|223548131|gb|EEF49623.1| cysteine protease, putative [Ricinus communis]
          Length = 362

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/233 (48%), Positives = 151/233 (64%), Gaps = 6/233 (2%)

Query: 32  LFLLWVLGIPAGAW-SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           + + + L    GAW S+   +     SM ER E W+  Y+R Y   +E Q R+ I+  NV
Sbjct: 8   ICITFALFFSIGAWTSQCMARTLQEASMYERHEQWMASYARVYKDANEKQMRYKIFKENV 67

Query: 91  QYIDYINSQ-NLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY---LGLPASV 146
           Q ID  NS+ + S+KL  N+FADL+NEEF S   G+       +    +Y     +PAS+
Sbjct: 68  QRIDSFNSESDKSYKLAVNQFADLTNEEFKSLRNGFKGHMCSAQAGHFRYENVTAVPASI 127

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGC 206
           DWRK+GAVT +K+QGQCGSCWAFSAVAAVEGI ++KTGKL+SLSEQELVDCD NSE+QGC
Sbjct: 128 DWRKKGAVTQIKEQGQCGSCWAFSAVAAVEGITEIKTGKLISLSEQELVDCDTNSEDQGC 187

Query: 207 NGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA 259
            GG M+ AF+FI +  G+ +E  YPY   +  C+T +    +  ITGYE +PA
Sbjct: 188 QGGLMDDAFKFIEQ-HGLASEATYPYDAADSTCKTKEEAKPSAKITGYEDVPA 239


>gi|326494040|dbj|BAJ85482.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 355

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 167/319 (52%), Gaps = 45/319 (14%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSNEE 117
             R E W+ +Y R Y    E  RR  ++++N ++ID +N + N ++ L  N F+DL+NEE
Sbjct: 38  RHRHERWMAKYGRVYADAAEKLRRQEVFAANARHIDAVNRAGNRTYTLGLNHFSDLTNEE 97

Query: 118 FISTYLGY-------------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           F  T+LGY             + P         Q    P SVDWR  GAVTPVK QG CG
Sbjct: 98  FAQTHLGYRHQPGPGGLRPEDSSPAAAVNVTDAQLQSTPDSVDWRARGAVTPVKHQGHCG 157

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAF+AVAA EG+ ++ TG L+S+SEQ+++DC   + +  C  GY+  A  +IT  GG+
Sbjct: 158 SCWAFAAVAATEGLVQIATGNLISMSEQQVLDCTGGTSS--CKSGYVNAALTYITASGGL 215

Query: 225 TTEDDYPYRGKNDRCQTDKTK---------HHAVTITGYE--------------AIPARY 261
            TE  Y Y  +   C++             H +  + G E              A+ A  
Sbjct: 216 QTEAAYAYSAEQGACRSGGASPNSAAAVGVHRSAMLNGDEGALQVLVAGQPVAVAVEAEP 275

Query: 262 AFQLYSHGVF--DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARN 318
            F  Y  GV+     CG +L+H VTVVGYG D  G+ YW+VKN WG  WGE GY+R+ R 
Sbjct: 276 DFHHYKSGVYVGSPSCGQKLHHAVTVVGYGADGDGQGYWVVKNQWGAGWGEVGYMRLTRG 335

Query: 319 SPSSNIGICGILMQASYPV 337
           +  +N   CG+   A YP 
Sbjct: 336 NGGNN---CGMATHAYYPT 351


>gi|310942958|pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
 gi|310942959|pdb|3P5V|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
 gi|310942961|pdb|3P5X|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
          Length = 220

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/219 (49%), Positives = 135/219 (61%), Gaps = 24/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP  VDWR  GAV  +KDQGQCGS WAFS +AAVEGINK+ TG L+SLSEQELVDC    
Sbjct: 1   LPDYVDWRSSGAVVDIKDQGQCGSXWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ 60

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
             +GC+GG+M   F+FI   GG+ TE +YPY  +  +C  D  +   V+I  YE +P   
Sbjct: 61  NTRGCDGGFMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNN 120

Query: 259 -------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                              A Y FQ YS G+F   CG  ++H VT+VGYG + G  YW+V
Sbjct: 121 EWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIV 180

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSWGT+WGE GY+R+ RN     +G CGI  +ASYPVK
Sbjct: 181 KNSWGTTWGEEGYMRIQRN--VGGVGQCGIAKKASYPVK 217


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 174/316 (55%), Gaps = 43/316 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S  E   RF I++ N   I   N++     +S+KL  N+F DL
Sbjct: 23  LRTQWEAFKTTHKKSYESHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDL 82

Query: 114 SNEEFISTYLGY-------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
              EF   + GY          +  P   +V    LP++VDWRK+GAVTPVKDQGQCGSC
Sbjct: 83  LAHEFAKIFNGYRGQRTSRGSTFMPP--ANVNDSSLPSTVDWRKKGAVTPVKDQGQCGSC 140

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA  ++EG + LK G+LVSLSEQ LVDC  +  N GC GG M+ AF++I    G+  
Sbjct: 141 WAFSATGSLEGQHFLKDGELVSLSEQNLVDCSQSFGNNGCEGGLMDNAFKYIKANDGIDA 200

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAF 263
           E+ YPY   +D+C+  K    A T TG+  I                           +F
Sbjct: 201 EESYPYEAMDDKCRFKKEDVGA-TDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSF 259

Query: 264 QLYSHGVFD--EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           QLYS GV+D  E    +L+HGV  VGYG   G+KYWLVKNSWG SWG+ GYI M+R+  +
Sbjct: 260 QLYSEGVYDEPECSSEELDHGVLAVGYGVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNN 319

Query: 322 SNIGICGILMQASYPV 337
                CGI   ASYP+
Sbjct: 320 Q----CGIASAASYPL 331


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/344 (39%), Positives = 188/344 (54%), Gaps = 51/344 (14%)

Query: 38  LGIPAG-------AWS------EGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFG 84
           +G PAG       AW+         P   DP +++  +  W K Y ++Y  ++E   R  
Sbjct: 1   MGAPAGSTIRTWLAWALLACSYAAAPVDRDP-ALDHHWNLWKKTYGKQYKEKNEEVARRL 59

Query: 85  IYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSV 137
           I+  N++++   N ++     S+ L  N   D+++EE IS       P   PR   + S 
Sbjct: 60  IWEKNLKFVTLHNLEHSMGMHSYDLGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSN 119

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
               LP SVDWR++G VT VK QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC
Sbjct: 120 SNQKLPDSVDWREKGCVTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 179

Query: 198 DVNS-ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
                 N+GCNGG+M +AF++I    G+ +E  YPY+  + +C+ D +K+ A T + Y  
Sbjct: 180 STEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKATDGKCRYD-SKNRAATCSKYTE 238

Query: 257 IP----------------------ARY-AFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDH 292
           +P                      AR+ +F LY  GV +D  C   +NHGV VVGYG  +
Sbjct: 239 LPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLN 298

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           G+ YWLVKNSWG ++G+ GYIRMARNS +     CGI    SYP
Sbjct: 299 GKDYWLVKNSWGLNFGDQGYIRMARNSGNH----CGIASYPSYP 338


>gi|340508003|gb|EGR33817.1| papain family cysteine protease, putative [Ichthyophthirius
           multifiliis]
          Length = 334

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/347 (40%), Positives = 192/347 (55%), Gaps = 41/347 (11%)

Query: 16  KIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSME--ERFENWLKQYSREY 73
           KI I M+ +L  A+ S  LL V   P    S   P     Q++     FEN+  +Y+++Y
Sbjct: 3   KIKIQMKGLLLLALASFTLLSVG--PILLLSPQTPLIRSSQNVNYVSEFENFNFKYNKQY 60

Query: 74  GSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPR 133
            S+ ++Q R  +++ N++YI+  N ++ SF L  N  + L+ EEFI TYLG N     P 
Sbjct: 61  QSQQQYQYRLQVFTENLKYIEQQNKKSQSFTLGVNSISHLTREEFIQTYLGLNIINYYPE 120

Query: 134 WPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
             S + +    LP SVDWR +GAVTPVKDQGQCGSCWAFS   ++EG N L+   L + S
Sbjct: 121 NISQEIVNVEDLPDSVDWRTQGAVTPVKDQGQCGSCWAFSTTGSLEGANYLQNKTLSAFS 180

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ+L+DC     N GCNGG M +AF+++    GVTTED YPY  K+    + K K+    
Sbjct: 181 EQQLMDCSWLYGNLGCNGGLMPRAFKWVAS-HGVTTEDKYPYEAKSHF--SCKNKNGEFK 237

Query: 251 ITGYEAIPA--------------------RYAFQLYSHGVFDEYCGHQLNHGVTVVGYGE 290
           I+ Y+ IP                        +Q YS GVFD+ C  +LNHGV  VGY  
Sbjct: 238 ISSYQEIPVGDCDALAQSVSQRPTSIAVDASNWQSYSSGVFDD-CATRLNHGVLAVGYTS 296

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +    YW+VKNSW TSWG+ GYI + R +       CG+   ASYPV
Sbjct: 297 E----YWIVKNSWNTSWGQQGYINLKRGN------TCGLCNSASYPV 333


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 173/319 (54%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  E E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 61  EEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 120

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N           + +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 121 HEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 180

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 181 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 240

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 241 DTEKSYPYEAIDDSCHFNKGTVGA-TDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHE 299

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  GE YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 300 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN 359

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 360 KENQ----CGIASASSYPL 374


>gi|313118768|gb|ADR32296.1| C14 cysteine protease [Solanum demissum]
 gi|313118770|gb|ADR32297.1| C14 cysteine protease [Solanum demissum]
          Length = 217

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 137/218 (62%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           N+GC+GG M+ AFEF+   GG+ TE+DYPY+ +N  C   +     VTI  YE +P    
Sbjct: 61  NEGCDGGLMDYAFEFVINNGGIDTEEDYPYKERNGVCDQYRKNAKVVTIDSYEDVPVNNE 120

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV V GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVVAGYGTENGMDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG  WGE GY+R+ RN  SS+ G+CG+ ++ SYPVK
Sbjct: 181 NSWGAKWGEKGYLRVQRNVASSS-GLCGLAIEPSYPVK 217


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 174/311 (55%), Gaps = 41/311 (13%)

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEE 117
           +E+W  +Y + Y    E   R  ++ SN+Q +   N        +++L  N +ADL NEE
Sbjct: 19  WESWKGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADLYNEE 78

Query: 118 FIST------YLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSA 171
           F++           +K   +   P V  + LP+SVDWR +G VTPVKDQGQCGSCW FSA
Sbjct: 79  FMALKGSGGLLQAKDKSSTQTFKPLVG-VTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSA 137

Query: 172 VAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYP 231
             ++EG +  KTG L+SLSEQ+LVDC     N GCNGG ME A+++I  +GGV  E  YP
Sbjct: 138 TGSLEGQHFAKTGNLLSLSEQQLVDCAGRYGNYGCNGGLMESAYDYIKGVGGVELESAYP 197

Query: 232 YRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSH 268
           Y  ++ RC+ D++K  A T  GY  IP                       + Y+FQLY  
Sbjct: 198 YTARDGRCKFDRSKVVA-TCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQLYES 256

Query: 269 GVFD-EYCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGI 326
           GV+D   C    L+HGV  VGYG + G+ YWLVKNSWG  WG+ GYI+M+++  +     
Sbjct: 257 GVYDFRRCSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQ---- 312

Query: 327 CGILMQASYPV 337
           CGI   + YP+
Sbjct: 313 CGIATDSCYPL 323


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 175/314 (55%), Gaps = 39/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S  E   RF I++ +   I   N++     +S+KL  N+F DL
Sbjct: 23  LRTQWEAFKTTHKKTYQSHMEELLRFKIFTESSLIIARHNAKYAKGLVSYKLGMNQFGDL 82

Query: 114 SNEEFISTYLGYN---KPYNEPRWP--SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              EF   + G++   K       P  +V    LP +VDWRK+GAVTPVKDQGQCGSCWA
Sbjct: 83  LAHEFARIFNGHHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWA 142

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  ++EG + LK G+LVSLSEQ LVDC  +  N GC GG ME AF++I    G+ TE 
Sbjct: 143 FSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEK 202

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQL 265
            YPY   +  C+  K    A T TGY  I A                         +FQL
Sbjct: 203 SYPYEAVDGECRFKKEDVGA-TDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQL 261

Query: 266 YSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE  C  + L+HGV VVGYG   G+KYWLVKNSW  SWG+ GYI M+R+    N
Sbjct: 262 YSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRD----N 317

Query: 324 IGICGILMQASYPV 337
              CGI  QASYP+
Sbjct: 318 NNQCGIASQASYPL 331


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 173/319 (54%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  E E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 27  EEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 86

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N           + +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 87  HEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 207 DTEKSYPYEAIDDSCHFNKGTVGA-TDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHE 265

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  GE YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 266 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN 325

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 326 KENQ----CGIASASSYPL 340


>gi|307192137|gb|EFN75465.1| Cathepsin L [Harpegnathos saltator]
          Length = 339

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/347 (39%), Positives = 191/347 (55%), Gaps = 52/347 (14%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           ++FLL  LGI A A +  +        + E +  +   + + Y S+ E   R  I+  N 
Sbjct: 4   AIFLL--LGILAAAQAISFFNL-----VTEEWNTFKVTHRKAYDSKIEESFRMKIFMENW 56

Query: 91  QYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYNKPYNE----------PRWPS 136
             I   N +     +S+KL  NK+ D+ + EFI+T  G+NK  +            R+  
Sbjct: 57  HKIALHNQKYELNEVSYKLGMNKYGDMLHHEFINTLNGFNKSVSAQLRAQRRPIGSRFIE 116

Query: 137 VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
              + +P+SVDWR  GAVTP+KDQG CGSCW+FSA  A+EG +   TGKLVSLSEQ L+D
Sbjct: 117 PANVEIPSSVDWRTHGAVTPIKDQGHCGSCWSFSATGALEGQHYRITGKLVSLSEQNLID 176

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           C     N GCNGG M++AF++I    G+ TE  YPY  +ND+C+ +  +++  T +GY  
Sbjct: 177 CSGRYGNNGCNGGLMDQAFQYIKDNHGLDTEISYPYEAENDKCRYN-PRNNGATDSGYVD 235

Query: 257 IP-----------------------ARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG-E 290
           IP                       +  +FQ Y  GV+ E  C  + L+HGV VVGYG +
Sbjct: 236 IPEGNEKKLKAAVATIGPVSVAIDASAESFQFYREGVYYEPRCSSENLDHGVLVVGYGTD 295

Query: 291 DHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           D+ + YWLVKNSWG +WG+ GYI+MARN  +     CGI   ASYP+
Sbjct: 296 DNDQDYWLVKNSWGVTWGDEGYIKMARNKDNH----CGIASSASYPL 338


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 172/305 (56%), Gaps = 34/305 (11%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           +++  QY R+YG   E   R  ++  N Q I+  N +     ++FK+  N+F D++NEEF
Sbjct: 20  DHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEF 79

Query: 119 ISTYLGYNK-PYNEPRWP-SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
            +   GY K    EP+   + +   +   VDWR +  VTPVKDQ QCGSCWAFSA  A+E
Sbjct: 80  NAVMKGYKKGSRGEPKAVFTAEGRPMARDVDWRTKALVTPVKDQEQCGSCWAFSATGALE 139

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G + LK  +LVSLSEQ+LVDC  +  N GC GG+M  AF++I   GG+ TE  YPY  ++
Sbjct: 140 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 199

Query: 237 DRCQTDKTKHHAVTITGYEAI----------------------PARYAFQLYSHGV-FDE 273
             C+ D     A+     E +                       + ++FQ YS GV +++
Sbjct: 200 RSCRFDANSIGAICTGSVEIVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQ 259

Query: 274 YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQ 332
            C    L+HGV  VGYG +  + YWLVKNSWG+SWG+AGYI+M+RN  ++    CGI  +
Sbjct: 260 NCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNN----CGIASE 315

Query: 333 ASYPV 337
            SYP 
Sbjct: 316 PSYPT 320


>gi|387015022|gb|AFJ49630.1| Cathepsin L1-like [Crotalus adamanteus]
          Length = 338

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/345 (38%), Positives = 197/345 (57%), Gaps = 47/345 (13%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           +  L +L +  GA S   P   DP ++ + + +W   +S++Y  ++E  RR  I+  N++
Sbjct: 1   MIYLCILALSFGA-SFAAP-GLDP-ALNDHWLSWKSWHSKKYHEKEEGWRRM-IWEKNLK 56

Query: 92  YIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GL 142
            I+  N  +     S++L  N F D++NEEF     G+ +  ++ ++   Q+L       
Sbjct: 57  MIELHNLDHSLGKHSYRLGMNHFGDMTNEEFRQVMNGFKQSRSQRKYKGSQFLEPNFLQA 116

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR++G VTPVKDQGQCGSCWAFSA  A+EG +  KTGKLVSLSEQ L+DC     
Sbjct: 117 PKSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQHFRKTGKLVSLSEQNLIDCSGPEG 176

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           NQGCNGG M++AF++I    G+ +E+ YPY GK+D     K ++++   TG+  IP    
Sbjct: 177 NQGCNGGLMDQAFQYIKDNNGIDSEESYPYIGKDDEDCLYKPEYNSANDTGFVDIPEGRE 236

Query: 259 -------------------ARYAFQLYSHGVFDE-YC-GHQLNHGVTVVGYG-----EDH 292
                              +  +FQ Y  GV+ E  C   +L+HGV VVGYG     +D+
Sbjct: 237 RALMKAVAAVGPISVAIDASHTSFQFYESGVYYEPQCNSEELDHGVLVVGYGYEGTDDDN 296

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            ++YW+VKNSW   WG+ GYI MA++  ++    CGI   ASYP+
Sbjct: 297 KKRYWIVKNSWSEKWGDQGYIHMAKDRSNN----CGIASAASYPM 337


>gi|194352764|emb|CAQ00110.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 406

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 181/347 (52%), Gaps = 70/347 (20%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
           M +RF  W+  ++R Y +  E  RRF +Y SN+++I+ +N++     L+++L +  F DL
Sbjct: 59  MMDRFHVWMTVHNRSYSTAGEKARRFEVYRSNMRFIEAVNAEAATSGLTYELGEGPFTDL 118

Query: 114 SNEEFISTYLG------------YNKPYNEPRWPSVQYLGL--------------PASVD 147
           +NEEF+  Y G             ++        S+  LG               P S+D
Sbjct: 119 TNEEFMELYTGQILEDDQSEDGDDDEQIITTHAGSIDGLGTHKGATVYANFSASAPTSID 178

Query: 148 WRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCN 207
           WRK G VTPVK+Q QCGSCWAF  VA +EGI+K+K G LVSLSEQ+L+DCD    + GC 
Sbjct: 179 WRKRGVVTPVKNQKQCGSCWAFPTVATIEGIHKIKRGTLVSLSEQQLIDCDY--LDNGCK 236

Query: 208 GGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQL-- 265
           GG + +AF++I K GG+T+   Y Y+    RC   + +  A  I G+  + +     L  
Sbjct: 237 GGLVTRAFQWIKKNGGITSTSSYKYKAVRGRCL--RNRKPAAKIVGFRKVKSNSEVSLMN 294

Query: 266 --------------------YSHGVFDEYCG-HQLNHGVTVVGYGEDH------------ 292
                               Y  G+++  C   +LNH VTVVGYG+              
Sbjct: 295 AVANQPVAVSISSHSSHFHHYKGGIYNGPCSTTKLNHAVTVVGYGQQQQNGADSVHASAP 354

Query: 293 GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           G KYW+VKNSWGT+WG+ GYI M R +  S+ G CGI  +  +P+ +
Sbjct: 355 GAKYWIVKNSWGTTWGDKGYILMKRGTKHSS-GQCGIATRPVFPLMK 400


>gi|67605684|ref|XP_666697.1| cryptopain precursor [Cryptosporidium hominis TU502]
 gi|54657738|gb|EAL36466.1| cryptopain precursor [Cryptosporidium hominis]
          Length = 401

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 195/364 (53%), Gaps = 49/364 (13%)

Query: 21  MRMMLRNAVLSLFLLWVLGIP-------AGAWSEGYPQKY-DPQSMEER--FENWLKQYS 70
           ++ ++   ++++F++ V+ +        +    +  P  Y DP + E R  FE + K+Y+
Sbjct: 35  LKNIIIATLIAIFIVLVVTVSLYITNNTSDKIDDFVPGDYVDPATREYRKSFEEFKKKYN 94

Query: 71  REYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKP-- 128
           + Y S +E  +RF IY  N+ +I   NSQ  S+ L  N+F DLS EEF++ + GY K   
Sbjct: 95  KTYSSMEEENQRFEIYKQNMNFIKTTNSQGFSYVLEMNEFGDLSKEEFMARFTGYIKDSK 154

Query: 129 -----YNEPRWPSVQY---LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
                +   R  + +       P S++W + G V P+++Q  CGSCWAFSAVAA+EG   
Sbjct: 155 DDERVFKSSRVSASELEEEFVPPNSINWVEAGCVNPIRNQKNCGSCWAFSAVAALEGATC 214

Query: 181 LKTGK-LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC 239
            +T + L SLSEQ+ VDC   + N GC+GG M  AF++  K   + T DDYPY  +   C
Sbjct: 215 AQTNRGLPSLSEQQFVDCSKQNGNFGCDGGTMGLAFQYAIKNKYLCTNDDYPYFAEEKTC 274

Query: 240 QTDKTKHH-AVTITGYEAIPAR-----------------------YAFQLYSHGVFDEYC 275
                +++  + +  Y+ +  R                         FQ Y  GVFD  C
Sbjct: 275 MDSFCENYIEIPVKAYKYVFPRNINTLKTALAKYGPISVAIQADQTPFQFYKSGVFDAPC 334

Query: 276 GHQLNHGVTVVGY--GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           G ++NHGV +VGY   ED  ++YWLV+NSWG +WGE GYI++A +S     G CGIL++ 
Sbjct: 335 GTKVNHGVVLVGYDMDEDTNKEYWLVRNSWGEAWGEKGYIKLALHSGKK--GTCGILVEP 392

Query: 334 SYPV 337
            YPV
Sbjct: 393 VYPV 396


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 180/319 (56%), Gaps = 38/319 (11%)

Query: 50  PQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKL 105
           P   DP +++  +  W K Y ++Y  ++E   R  I+  N++++   N ++     S+ L
Sbjct: 14  PVDRDP-ALDHHWNLWKKTYGKQYKEKNEEVARRLIWEKNLKFVTLHNLEHSMGMHSYDL 72

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVKDQGQ 162
             N   D+++EE IS       P   PR   + S     LP SVDWR++G VT VK QG 
Sbjct: 73  GMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSNSNQKLPDSVDWREKGCVTKVKYQGA 132

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQGCNGGYMEKAFEFITKI 221
           CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+GCNGG+M +AF++I   
Sbjct: 133 CGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDN 192

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------A 259
            G+ +E  YPY+  + +C+ D +K+ A T + Y  +P                      A
Sbjct: 193 NGIDSEASYPYKATDGKCRYD-SKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDA 251

Query: 260 RY-AFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
           R+ +F LY  GV +D  C   +NHGV VVGYG  +G+ YWLVKNSWG ++G+ GYIRMAR
Sbjct: 252 RHSSFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMAR 311

Query: 318 NSPSSNIGICGILMQASYP 336
           NS +     CGI    SYP
Sbjct: 312 NSGNH----CGIASYPSYP 326


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 188/348 (54%), Gaps = 50/348 (14%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           + LFL  ++ + A A +  + +      + + +  +  ++++ Y ++ E + R  I+  N
Sbjct: 1   MKLFLFLIVAVLATAQAISFFE-----LVNQEWTTFKMEHNKVYKNDVEERFRMKIFMDN 55

Query: 90  VQYIDYINS----QNLSFKLTDNKFADLSNEEFISTYLGYNKPYN----EPRWPSVQY-- 139
              I   N     + +S+KL  NK+ D+ + EF++T  G+NK  N      R P      
Sbjct: 56  KHKIAKHNGNYEMKKVSYKLKMNKYGDMLHHEFVNTLNGFNKSINTQLRSERLPIAASFI 115

Query: 140 ----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
               + LP +VDWR+ GAVTPVKDQG CGSCW+FSA  A+EG +  +TG L+ LSEQ L+
Sbjct: 116 EPANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLI 175

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE 255
           DC     N GCNGG M++AF++I    G+ TE  YPY  +ND+C+ +     A  + GY 
Sbjct: 176 DCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTYPYEAENDKCRYNAANSGARDV-GYV 234

Query: 256 AIP-----------------------ARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYGE 290
            IP                       +  +FQ YS GV+   E     L+HGV  VGYG 
Sbjct: 235 DIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSENLDHGVLAVGYGT 294

Query: 291 D-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           D +G+ YWLVKNSWG +WG+ GYI+MARN     +  CGI   ASYP+
Sbjct: 295 DENGQDYWLVKNSWGETWGDNGYIKMARNK----LNHCGIASTASYPL 338


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 171/304 (56%), Gaps = 39/304 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY S+ E + R  IY  N   +   N        S+ +  NKF DL + EF S   G
Sbjct: 34  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYHVAMNKFGDLLHHEFRSIMNG 93

Query: 125 Y-NKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           Y +K  N  R  S         + +P SVDWR++GA+TPVKDQGQCGSCWAFS+  A+EG
Sbjct: 94  YQHKKQNSSRAESTFTFMEPANVTVPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEG 153

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
               KTGKLVSLSEQ L+DC     N+GCNGG M++AF++I    G+ TE+ YPY  ++D
Sbjct: 154 QTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDD 213

Query: 238 RC--------------------QTDKTKHHAVTITGYE-AIPARY-AFQLYSHGVFDE-Y 274
            C                    + DK K    T+     AI A + +FQ YS GV+ E  
Sbjct: 214 VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPS 273

Query: 275 C-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV VVGYG D+G+ YWLVKNSW   WG+ GYI+MARN  +     CG+   A
Sbjct: 274 CDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKMARNRKNH----CGVASAA 329

Query: 334 SYPV 337
           SYP+
Sbjct: 330 SYPL 333


>gi|118424553|gb|ABK90824.1| cathepsin L-like cysteine proteinase [Spodoptera exigua]
          Length = 344

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 171/316 (54%), Gaps = 51/316 (16%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYL 123
           ++S++Y SE E + R  IY  N   I   N +     +S+KL  NK+AD+ + EF+ T  
Sbjct: 33  EHSKQYDSEVEDKFRMKIYVENKHRITKHNQRFEQRLVSYKLKPNKYADMLHHEFVHTMN 92

Query: 124 GYNKPYNE----------------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
           G+NK                      + +  ++  P  VDWRK+GAVT VKDQG+CGSCW
Sbjct: 93  GFNKTAKHGGRNKNVHGKGHDGRAATFIAPAHVSYPDHVDWRKKGAVTDVKDQGKCGSCW 152

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   A+EG +  KTG LVSLSEQ L+DC     N GCNGG M+ AF++I   GG+ TE
Sbjct: 153 AFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNGCNGGLMDNAFKYIKDNGGIDTE 212

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQ 264
             YPY   +D+C+ +  K       G+  IP                       ++  FQ
Sbjct: 213 KSYPYEAVDDKCRYN-PKESGADDVGFVDIPQGDEEKLMQAVATVGPISVAIDASQETFQ 271

Query: 265 LYSHGV-FDEYCGH-QLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            YS GV +DE C    L+HGV VVGYG E+ G   WLVKNSWG SWGE GYI+MARN  +
Sbjct: 272 FYSKGVYYDENCSSTDLDHGVMVVGYGTEEDGSDDWLVKNSWGRSWGELGYIKMARNKNN 331

Query: 322 SNIGICGILMQASYPV 337
                CGI   ASYP+
Sbjct: 332 H----CGIASSASYPL 343


>gi|72005575|ref|XP_783218.1| PREDICTED: cathepsin L2-like isoform 2 [Strongylocentrotus
           purpuratus]
 gi|390337647|ref|XP_003724610.1| PREDICTED: cathepsin L2-like isoform 1 [Strongylocentrotus
           purpuratus]
          Length = 334

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 187/343 (54%), Gaps = 45/343 (13%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           +  F++ +L + AGA +   P +      +E ++ W+  + +EY +  E   R  I+  N
Sbjct: 1   MKTFIIVLLSV-AGALATRLPSR----DFDEEWKEWVDYHGKEYSAMGEEMERRMIWEDN 55

Query: 90  VQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYL-----GYNKPYNEPRWPSVQYL 140
           ++ I   N ++     +++L  N+F D++N EF++T       G  K      +   ++L
Sbjct: 56  LRIITKHNLEHSQGKTTYRLGMNEFGDMTNAEFVATRTMKKMSGVPKVGQGSTFLPSEFL 115

Query: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVN 200
            LP SVDWR EG VTPVKDQGQCGSCWAFS V A+EG + +KTG LVSLSEQ LVDC   
Sbjct: 116 QLPDSVDWRTEGYVTPVKDQGQCGSCWAFSTVGALEGQHFVKTGTLVSLSEQNLVDCSQA 175

Query: 201 SENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA- 259
             N GCNGG+   A E+I   GG+ TE  YPY G +D C   +T     TITG+  + A 
Sbjct: 176 EGNDGCNGGWPAWADEYIKSNGGIDTEVGYPYEGVDDSCHY-RTSDVGATITGFAEVEAD 234

Query: 260 ----------------------RYAFQLYSHGVFDE--YCGHQLNHGVTVVGYGED-HGE 294
                                 + +FQLY  GV+DE       L+H VT VGY     G+
Sbjct: 235 SEKALEKALAQVGPISVCIDATQPSFQLYESGVYDEPDCSSTALDHCVTAVGYDSTADGD 294

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KY++VKNSWGT+WG+ GYI M+R+        CGI   A+YP+
Sbjct: 295 KYYIVKNSWGTTWGQEGYIWMSRDKQKQ----CGIATNATYPL 333


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/342 (40%), Positives = 190/342 (55%), Gaps = 51/342 (14%)

Query: 33  FLLW---VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSS 88
           F++W   VL +P  +++  YP++     ++  +E W K + ++Y S+ DE  RR  I+  
Sbjct: 53  FVMWGLKVLLLPMVSFAL-YPEEI----LDTHWELWKKTHRKQYTSKVDEISRRL-IWEK 106

Query: 89  NVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG--- 141
           N++YI   N +      +F+L  N   D+++EE +    G   P +  R     Y+    
Sbjct: 107 NLKYISIHNLEASLGVHTFELAMNHLGDMTSEEVVQKMTGLKVPTSFSRSNDTLYIPDWE 166

Query: 142 --LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
              P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC  
Sbjct: 167 GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV- 225

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP- 258
            SEN GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T   A    GY  IP 
Sbjct: 226 -SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPE 283

Query: 259 ----------ARY------------AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGE 294
                     AR             +FQ YS GV +DE C    LNH V  VGYG   G 
Sbjct: 284 GNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGN 343

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           K+W++KNSWG +WG  GYI MARN  ++    CGI   AS+P
Sbjct: 344 KHWIIKNSWGENWGNKGYILMARNKNNA----CGIANLASFP 381


>gi|417409876|gb|JAA51427.1| Putative cathepsin s, partial [Desmodus rotundus]
          Length = 342

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 185/338 (54%), Gaps = 38/338 (11%)

Query: 31  SLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNV 90
           S+ + W++ +  G  S    Q +   +++  ++ W K Y ++Y  ++E   R  I+  N+
Sbjct: 9   SIIMKWLVLVLLGC-SSAMAQLHKDPTLDRHWDLWKKTYGKQYKEKNEEGVRRLIWEKNL 67

Query: 91  QYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLP 143
           +++   N ++     S+ L  N   D+++EE  +       P    R   + S     LP
Sbjct: 68  KFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVTALMSSLRVPSQWQRNVTYKSNPNQKLP 127

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-E 202
            SVDWR +G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC V    
Sbjct: 128 DSVDWRDKGCVTDVKYQGSCGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSVGKYS 187

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           N+GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D +K+ A T + Y  +P    
Sbjct: 188 NRGCNGGFMTEAFQYIIDNNGIESEASYPYKAMDGKCQYD-SKYRAATCSRYTELPEDSE 246

Query: 259 -------------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWL 298
                              +  +F LY  GV +D  C   +NHGV VVGYG  +G+ YWL
Sbjct: 247 DALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDPACTLHVNHGVLVVGYGNLNGKDYWL 306

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           VKNSWG  +G+ GYIRMARNS +     CGI   ASYP
Sbjct: 307 VKNSWGLHFGDQGYIRMARNSGNH----CGIASYASYP 340


>gi|530734|emb|CAA56914.1| cathepsin l [Nephrops norvegicus]
 gi|1582620|prf||2119193A cathepsin L-related Cys protease
          Length = 324

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 176/308 (57%), Gaps = 38/308 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEF 118
           E +  ++ R+Y   +E + R  ++  N+QYI+  N    S  +++ L  N+F+DL+N+EF
Sbjct: 21  EEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYESGEVTYNLAINQFSDLTNDEF 80

Query: 119 ISTYLGYN---KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
            S   GY    +P     + S         VDWR +G VT VKDQGQCGSCWAFSA  ++
Sbjct: 81  NSMMKGYKTSLRPKPVAVFTSTDAAPETTEVDWRTKGCVTHVKDQGQCGSCWAFSATGSL 140

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNS-ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           EG + LK G+LVSL+EQ+LVDC      NQGCNGG++ +AF++I   GG+ TE  YPY  
Sbjct: 141 EGQHFLKYGELVSLAEQQLVDCAGGIYYNQGCNGGWVNQAFKYIKANGGIDTESSYPYEA 200

Query: 235 KNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYSHGVF 271
           +++ C+ + +   A T +G+ +I                        A  +FQ YS GV+
Sbjct: 201 RDNTCRFN-SNSVAATCSGFVSIAQGSESPEVRRTTNTGPISVAIDAAHRSFQSYSSGVY 259

Query: 272 DE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
            E      QL+H V  VGYG + G+ +WLVKNSWGTSWG AGYI MARN  ++    CGI
Sbjct: 260 YEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWGTSWGSAGYINMARNRNNN----CGI 315

Query: 330 LMQASYPV 337
              ASYP 
Sbjct: 316 ATDASYPT 323


>gi|356552228|ref|XP_003544471.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 351

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/336 (38%), Positives = 191/336 (56%), Gaps = 45/336 (13%)

Query: 28  AVLSLFLLWVLGIPA--------GAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEW 79
           A++ LF+++ +             A ++   ++ D + M   FE WL ++ + Y +  E 
Sbjct: 4   AIVLLFMVFAVSSALDMSIISHDNAHADRATRRTDDEVMS-MFEEWLVKHDKVYNALGEK 62

Query: 80  QRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYL---------GYNKPYN 130
           ++RF I+ +N+++ID  NS N ++KL  N FADL+N E+ + YL           + P  
Sbjct: 63  EKRFQIFKNNLRFIDERNSLNRTYKLGLNVFADLTNAEYRAMYLRTWDDGPRLDLDTP-- 120

Query: 131 EPRWPSVQYLG--LPASVDWRKEGAVTPVKDQG-QCGSCWAFSAVAAVEGINKLKTGKLV 187
            PR   V  +G  +P SVDWRKEGAVTPVK+QG  C SCWAF+AV AVE + K+KTG L+
Sbjct: 121 -PRNHYVPRVGDTIPKSVDWRKEGAVTPVKNQGATCNSCWAFTAVGAVESLVKIKTGDLI 179

Query: 188 SLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHH 247
           SLSEQE+VDC   S ++GC GG ++  + +I K  G++ E DYPYRG   +C ++K K+ 
Sbjct: 180 SLSEQEVVDC-TTSSSRGCGGGDIQHGYIYIRK-NGISLEKDYPYRGDEGKCDSNK-KNA 236

Query: 248 AVTITGYEAIPARY------------AFQLY------SHGVFDEYCGHQLNHGVTVVGYG 289
            VTI G+  +P +             A+ LY        GVF   CG +LNH + +VGYG
Sbjct: 237 IVTIDGHGWVPTQLEEALNRALFCYCAYFLYVDKFFLCQGVFKGKCGTELNHALLLVGYG 296

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
            +    YW+ KNS+   WGE GYIR+ R   +   G
Sbjct: 297 TEKDGDYWIAKNSYSDKWGENGYIRIQRKLSTCKFG 332


>gi|313118772|gb|ADR32298.1| C14 cysteine protease [Solanum demissum]
          Length = 217

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 135/218 (61%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGDLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-- 260
           NQGC+GG M+ AFEF+   GG+ TE+DYPY+ +ND C   +     V I  YE +P    
Sbjct: 61  NQGCDGGLMDYAFEFVINNGGIDTEEDYPYKERNDVCDQYRKNAKVVKIDSYEDVPVNNE 120

Query: 261 --------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV   GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVAAGYGTENGMDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG  WGE GY+R+ RN  SS+ G+CG+  + SYPVK
Sbjct: 181 NSWGAKWGEKGYLRVQRNIASSS-GLCGLATEPSYPVK 217


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 36  YPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 94

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D++NEE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 95  NHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 154

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 155 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 212

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 213 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 271

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 272 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 331

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 332 NKNNA----CGIANLASFP 346


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 172/317 (54%), Gaps = 43/317 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFAD 112
           +DP  +   F  W++  S+ Y S +E+  R+ ++  N Q I+  N  N +  L  NKF D
Sbjct: 23  HDP--LTGVFAEWMRDNSKSY-SNEEFVFRWNVWRENQQLIEEHNRSNKTSFLAMNKFGD 79

Query: 113 LSNEEFISTYLGY--------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           L+N EF   + G         NK   E   P+    GL A  DWR++GAVT VK+QGQCG
Sbjct: 80  LTNAEFNKLFKGLAFDYSFHANKAAAEKAVPAP---GLSADFDWRQKGAVTHVKNQGQCG 136

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCW+FS   + EG N LKTG+L SLSEQ L+DC  +  N GCNGG M+ AFE+I    G+
Sbjct: 137 SCWSFSTTGSTEGANFLKTGRLTSLSEQNLIDCSGSYGNNGCNGGLMDYAFEYIINNKGI 196

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYE---------------------AIPARY-A 262
            TE  YPY+     CQ +       ++T Y                      AI A + +
Sbjct: 197 DTEASYPYQTAQYTCQYNPANSGG-SLTSYTDVSSGDENALLNAVATEPTSVAIDASHNS 255

Query: 263 FQLYSHGVFDEYC--GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           FQ YS GV+ E      QL+HGV  VG+G + G+ YWLVKNSWG  WG AGYI+MARN  
Sbjct: 256 FQFYSGGVYYESACSSTQLDHGVLAVGWGTEDGQDYWLVKNSWGADWGLAGYIKMARNRS 315

Query: 321 SSNIGICGILMQASYPV 337
           ++    CGI   ASYP 
Sbjct: 316 NN----CGIATSASYPT 328


>gi|296228726|ref|XP_002759933.1| PREDICTED: cathepsin S isoform 1 [Callithrix jacchus]
          Length = 330

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 178/314 (56%), Gaps = 37/314 (11%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNK 109
           DP +++  +  W K Y ++Y  ++E   R  I+  N++++   N ++     S+ L  N 
Sbjct: 21  DP-TLDHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNH 79

Query: 110 FADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
             D+++EE +S       P    R   + S     LP SVDWR++G VT VK QG CG+C
Sbjct: 80  LGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGAC 139

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSAV A+E   KLKTGKLVSLS Q LVDC     N+GCNGG+M +AF++I    G+ +
Sbjct: 140 WAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDS 199

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAF 263
           E  YPY+  + +CQ D +K+ A T + Y  +P                       +  +F
Sbjct: 200 EASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHSSF 258

Query: 264 QLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
            LY  GV +D  C   +NHGV V+GYG+ +GE+YWLVKNSWG+++GE GYIRMARN  + 
Sbjct: 259 FLYRSGVYYDPACTQNVNHGVLVIGYGDLNGEEYWLVKNSWGSNFGERGYIRMARNKGNH 318

Query: 323 NIGICGILMQASYP 336
               CGI    SYP
Sbjct: 319 ----CGIASYPSYP 328


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 186/336 (55%), Gaps = 40/336 (11%)

Query: 34  LLWVLGI-PAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           + W++G+ P  +++     K DP +++  +  W K YS++Y  E+E   R  I+  N+++
Sbjct: 1   MKWLVGLLPLCSYAVAQVHK-DP-TLDHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKF 58

Query: 93  IDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPAS 145
           +   N ++     S+ L  N   D++ EE IS       P    R   + S     LP S
Sbjct: 59  VMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKLPDS 118

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQ 204
           VDWR++G VT VK QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+
Sbjct: 119 VDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNK 178

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GCNGG+M  AF++I    G+ +E  YPY+  N +C+ D +K  A T + Y  +P      
Sbjct: 179 GCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYD-SKKRAATCSKYTELPFGSEDA 237

Query: 259 -----------------ARYAFQLYSHGVFDE-YCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                            + Y+F LY  GV+ E  C   +NHGV VVGYG  +G+ YWLVK
Sbjct: 238 LKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLVK 297

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           NSWG ++G+ GYIRMARNS +     CGI    SYP
Sbjct: 298 NSWGLNFGDQGYIRMARNSGNH----CGIASYPSYP 329


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 180/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTQWELWKKTYGKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGAHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P ++ R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPPSDSRNNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQDESCMYNPT-GKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/308 (39%), Positives = 176/308 (57%), Gaps = 35/308 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDY--INSQNLSFKLTDNKFADLSNEE 117
           + F++W  +Y++ Y +++    R  I+ SN ++++    NS    F +  N+FADL   E
Sbjct: 22  QEFQDWKVKYNKVYETKETELERQIIWESNKKFVENHNANSDKFGFTVAMNEFADLDAGE 81

Query: 118 FISTYLGY-NKP--YNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           F   + G   +P  YN         + +P +VDW+++GAVTP+K+QGQCGSCW+FS+  +
Sbjct: 82  FGRIFNGLLPRPSSYNSTNIYKPSGVKVPDTVDWKEKGAVTPIKNQGQCGSCWSFSSTGS 141

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EG + + TG LVSLSEQ+L+DC     N GCNGG M+ +F ++  + G  TED+YPY  
Sbjct: 142 LEGQHFINTGTLVSLSEQQLMDCSTKYGNHGCNGGLMDNSFRYLKSVAGDETEDNYPYTA 201

Query: 235 KNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVF 271
           +N  C+ D +    VT   Y  IP                       +  +FQLY+ GV+
Sbjct: 202 ENGVCRYD-SSLAVVTDKSYVDIPQGDEDSLKDAVANVGPISVAIDASHSSFQLYNSGVY 260

Query: 272 --DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
                   QL+HGV  +GYG + G+ YWLVKNSWGTSWG  GYI+M+RN  ++    CGI
Sbjct: 261 YASTCSSTQLDHGVLAIGYGTEDGKDYWLVKNSWGTSWGMEGYIKMSRNRNNN----CGI 316

Query: 330 LMQASYPV 337
             QASYP 
Sbjct: 317 ATQASYPT 324


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/306 (41%), Positives = 172/306 (56%), Gaps = 33/306 (10%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           +E +  W   +++ Y  + E   R+ I+  N + I   N +   F L  N+F D++N EF
Sbjct: 24  DESWIQWKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFLLKMNQFGDMTNSEF 83

Query: 119 ISTYLGY--NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
              + GY  +K  N   + +      P +VDWR EG VTPVKDQGQCGSCWAFS   ++E
Sbjct: 84  -KAFNGYLSHKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLE 142

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF +I +  G+ +E  YPY  ++
Sbjct: 143 GQHFKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAED 202

Query: 237 DRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE 273
            +C   K    A T TG+  +P                       +  +FQ YS GV++E
Sbjct: 203 GKC-VFKKPSVAATDTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNE 261

Query: 274 -YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C   +L+HGV VVGYG + G+ YWLVKNSW TSWG+ GYI+M RN+ +     CGI  
Sbjct: 262 PSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQ----CGIAT 317

Query: 332 QASYPV 337
           +ASYP+
Sbjct: 318 KASYPL 323


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AFE++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFEYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV FDE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSRGVYFDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|348525618|ref|XP_003450319.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 330

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 175/318 (55%), Gaps = 37/318 (11%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           ++D  S++ ++E W   + REY    E   R  I+  N++ I+  N +      SF++  
Sbjct: 17  RFDESSLDAQWEEWKSTHRREYNGLGEEGIRRAIWEKNMRMIEAHNEEAALGIHSFEMGM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPA----SVDWRKEGAVTPVKDQGQC 163
           N   D+++EE +    G   P N+ R  ++    +P+    SVD+RK+G VT VK+QG C
Sbjct: 77  NHLGDMTSEEVVEKMTGLQIPMNQERSFTLAMDDMPSKIPKSVDYRKKGMVTSVKNQGAC 136

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFSA  A+EG     TGKLV LS Q LVDC     N GCNGG+M +AF+++    G
Sbjct: 137 GSCWAFSAAGALEGQLAKSTGKLVDLSPQNLVDCSGKYGNHGCNGGFMTRAFQYVIDNHG 196

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------R 260
           + ++  YPY G++++C+ +     A   + Y+ +P                        R
Sbjct: 197 IDSDASYPYTGRDEQCRYNPAT-RAANCSSYQFLPEGDENALKQALATIGPISVAIDARR 255

Query: 261 YAFQLYSHGVF-DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
             F  Y  GV+ D  C  ++NHGV  VGYG  +G+ YWLVKNSWG+++G+ GYIRMARN+
Sbjct: 256 PRFSFYRSGVYNDPSCTQEVNHGVLAVGYGSLNGQDYWLVKNSWGSTFGDQGYIRMARNT 315

Query: 320 PSSNIGICGILMQASYPV 337
            +     CGI + A YPV
Sbjct: 316 GNQ----CGIALYACYPV 329


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D++NEE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|66475996|ref|XP_627814.1| cryptopain - cysteine proteinase secreted, possible transmembrane
           domain near N-terminus [Cryptosporidium parvum Iowa II]
 gi|32399065|emb|CAD98305.1| cryptopain precursor [Cryptosporidium parvum]
 gi|46229218|gb|EAK90067.1| cryptopain - cysteine proteinase secreted, possible transmembrane
           domain near N-terminus [Cryptosporidium parvum Iowa II]
 gi|76160841|gb|ABA40395.1| cryptopain-1 [Cryptosporidium parvum]
          Length = 401

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 196/374 (52%), Gaps = 49/374 (13%)

Query: 11  TNLHLKIAIDMRMMLRNAVLSLFLLWVLGIP-------AGAWSEGYPQKY-DPQSMEER- 61
           TN   +    ++ ++   ++++F++ V+ +        +    +  P  Y DP + E R 
Sbjct: 25  TNQQREPNKKLKNIIIATLIAIFIVLVVTVSLYITNNTSDKIDDFVPGDYVDPATREYRK 84

Query: 62  -FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
            FE + K+Y + Y S +E  +RF IY  N+ +I   NSQ  S+ L  N+F DLS EEF++
Sbjct: 85  SFEEFKKKYHKVYSSMEEENQRFEIYKQNMNFIKTTNSQGFSYVLEMNEFGDLSKEEFMA 144

Query: 121 TYLGYNKPYNEPRW----------PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            + GY K   +              S +    P S++W + G V P+++Q  CGSCWAFS
Sbjct: 145 RFTGYIKDSKDDERVFKSSRVSASESEEEFVPPNSINWVEAGCVNPIRNQKNCGSCWAFS 204

Query: 171 AVAAVEGINKLKTGK-LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           AVAA+EG    +T + L SLSEQ+ VDC   + N GC+GG M  AF++  K   + T DD
Sbjct: 205 AVAALEGATCAQTNRGLPSLSEQQFVDCSKQNGNFGCDGGTMGLAFQYAIKNKYLCTNDD 264

Query: 230 YPYRGKNDRCQTDKTKHH-AVTITGYEAIPAR-----------------------YAFQL 265
           YPY  +   C     +++  + +  Y+ +  R                         FQ 
Sbjct: 265 YPYFAEEKTCMDSFCENYIEIPVKAYKYVFPRNINALKTALAKYGPISVAIQADQTPFQF 324

Query: 266 YSHGVFDEYCGHQLNHGVTVVGY--GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Y  GVFD  CG ++NHGV +VGY   ED  ++YWLV+NSWG +WGE GYI++A +S    
Sbjct: 325 YKSGVFDAPCGTKVNHGVVLVGYDMDEDTNKEYWLVRNSWGEAWGEKGYIKLALHSGKK- 383

Query: 324 IGICGILMQASYPV 337
            G CGIL++  YPV
Sbjct: 384 -GTCGILVEPVYPV 396


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 180/316 (56%), Gaps = 41/316 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
            +  +E W   Y + Y +E+E +R++ I+  N++Y+   N +      ++K+  N+FADL
Sbjct: 20  FQNEWEEWKTLYGKVYRAEEELKRQY-IWLENLKYVTQHNLEADEGKHTYKVDTNQFADL 78

Query: 114 SNEEFISTYLG-YNKPYNEPRWPSVQYLGL------PASVDWRKEGAVTPVKDQGQCGSC 166
           SN+E+         +P N+  + ++ ++ +      P +VDWRKEG VTPVKDQ QCGSC
Sbjct: 79  SNDEWRELMTSQVTRPTNQMSFCNMTFMTVGDHVIAPKNVDWRKEGYVTPVKDQKQCGSC 138

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS   ++EG +  KTGKLVSLSEQ LVDC +   N GC GG M+  FE+I   GG+ T
Sbjct: 139 WAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSMKEGNHGCQGGLMDLGFEYIFDNGGIDT 198

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITG----------------------YEAIPARY-AF 263
           E  YPY  KN+     K  +   T+TG                        AI A + +F
Sbjct: 199 ESSYPYMAKNEPQCMYKRSNSGATLTGCVDIKRGSESALMKAVADVGPISVAIDAGHKSF 258

Query: 264 QLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           Q+Y  GV+ E  C   +L+HGV  VG+G D+GE +WLVKNSWG  WG  GYI M+RN  +
Sbjct: 259 QMYKSGVYYEPSCSSVKLDHGVLAVGFGADNGEDFWLVKNSWGPIWGMEGYIMMSRNRDN 318

Query: 322 SNIGICGILMQASYPV 337
           +    CGI  QASYP+
Sbjct: 319 N----CGIATQASYPL 330


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/306 (41%), Positives = 173/306 (56%), Gaps = 33/306 (10%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           +E +  W   +++ Y  + E   R+ I+  N + I   N +   F L  N+F D++N EF
Sbjct: 24  DESWIQWKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFILKMNQFGDMTNSEF 83

Query: 119 ISTYLGY--NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVE 176
              + GY  +K  N   + +      P +VDWR EG VTPVKDQGQCGSCWAFS   ++E
Sbjct: 84  -KAFNGYLSHKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLE 142

Query: 177 GINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 236
           G +  KTGKLVSLSEQ LVDC     N GC+GG M+ AF +I +  G+ +E  YPY  ++
Sbjct: 143 GQHFKKTGKLVSLSEQNLVDCSTAYGNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAED 202

Query: 237 DRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGVFDE 273
            +C   K+   A T TG+  IP                       +  +FQ YS GV++E
Sbjct: 203 GKCVFKKSS-VAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNE 261

Query: 274 -YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C   +L+HGV VVGYG + G+ YWLVKNSW TSWG+ GYI+M RN+ +     CGI  
Sbjct: 262 PSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQ----CGIAT 317

Query: 332 QASYPV 337
           +ASYP+
Sbjct: 318 KASYPL 323


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/303 (41%), Positives = 172/303 (56%), Gaps = 41/303 (13%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLG 124
           + + Y ++ E   R  I+  N + I+  N++     +S+K+  N F DL   EF +   G
Sbjct: 34  HGKTYKNQFEEMFRMKIFMDNKKKIEAHNAKYEQGEVSYKMMMNHFGDLMVHEFKALMNG 93

Query: 125 YNKPYNEPR-----WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGIN 179
           +    +  R     +PS     LP +VDWR++GAVTPVKDQGQCGSCW+FSA  ++EG  
Sbjct: 94  FKMSPDTKRNGELYFPSNS--NLPKTVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQV 151

Query: 180 KLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC 239
            LKTGKLVSLSEQ LVDC  +  N GC GG M++AF++++   G+ TE  YPY  + + C
Sbjct: 152 FLKTGKLVSLSEQNLVDCSTSYGNNGCEGGLMDQAFQYVSDNKGIDTEASYPYEARENTC 211

Query: 240 QTDKTKHHAVTITGYEAIPA-----------------------RYAFQLYSHGVFDE--Y 274
           +  K K    T  G+  IPA                         +FQ YS GV++E   
Sbjct: 212 RFKKNKVGG-TDKGHVDIPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGVYNEPNC 270

Query: 275 CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS 334
             + L+HGV  VGYG ++G+ YWLVKNSWG SWGE GYI++ARN  +     CGI   AS
Sbjct: 271 SSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHSNH----CGIASMAS 326

Query: 335 YPV 337
           YP+
Sbjct: 327 YPL 329


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/343 (40%), Positives = 190/343 (55%), Gaps = 49/343 (14%)

Query: 31  SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYSS 88
           SLFL  + LGI + A      QK+D +S++E++  W   Y + Y + E++W+R   ++  
Sbjct: 4   SLFLTALCLGIASAA------QKHD-ESLDEQWYQWKSLYKKPYAANEEDWRR--AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-L 142
           N++ I+  N +       F +T N F D++NEEF     G+ N+   + +       G +
Sbjct: 55  NMKMIERHNQEYSQGKHGFTMTMNAFGDMTNEEFRQVMNGFQNQKRIQGKLLYEPVFGHI 114

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDW ++G VTPVKDQGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC     
Sbjct: 115 PKSVDWTQKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRREG 174

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-- 260
           N+GCNGG M+ AF++I   GG+ +E+ YPY   + +      K+ A   TG+  IP +  
Sbjct: 175 NEGCNGGLMDNAFQYIKDNGGLDSEESYPYTAMDKQDCRYNPKYSAANDTGFVDIPPQEK 234

Query: 261 --------------------YAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG----EDHGE 294
                                +FQ Y  G+ +D  C  + LNHGV VVGYG    +    
Sbjct: 235 ALMKAVATVGPISVAVDAGHESFQFYKSGIYYDSNCSSKDLNHGVLVVGYGFEGIDSANN 294

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +YWLVKNSWGT WG  GYI+MA++  +     CGI   ASYP 
Sbjct: 295 RYWLVKNSWGTGWGTDGYIKMAKDRNNH----CGIATAASYPT 333


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 173/319 (54%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  + E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 27  EEWHTFKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 86

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N           + +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 87  HEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 207 DTEKSYPYEAIDDSCHFNKGTIGA-TDRGFTDIPQGDEKKMAEAVATVGPVAVAIDASHE 265

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  GE YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 266 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN 325

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 326 KENQ----CGIASASSYPL 340


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 184/324 (56%), Gaps = 44/324 (13%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           + DP+ ++  ++ W   ++++Y   +E  RR  ++  N++ I+  N  +     S+KL  
Sbjct: 1   RADPE-LDGHWQLWKSWHNKDYHEREESWRRV-VWEKNLKMIELHNLDHTLGKHSYKLGM 58

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N+F D++ EEF     GY    +E ++   Q+L       P SVDWR++G VTPVKDQGQ
Sbjct: 59  NQFGDMTTEEFRQLMNGYAHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQ 118

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS   A+EG +  KTGKLVSLSEQ LVDC     NQGCNGG M++AF+++   G
Sbjct: 119 CGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNG 178

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY--------------------- 261
           G+ +E+ YPY  K+D     K +++A   TG+  IP  +                     
Sbjct: 179 GIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAG 238

Query: 262 --AFQLYSHGVFDE--YCGHQLNHGVTVVGY---GED-HGEKYWLVKNSWGTSWGEAGYI 313
             +FQ Y  G++ E       L+HGV VVGY   GED  G+KYW+VKNSWG  WG+ GYI
Sbjct: 239 HSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYI 298

Query: 314 RMARNSPSSNIGICGILMQASYPV 337
            MA++  +     CGI   ASYP+
Sbjct: 299 YMAKDRKNH----CGIATAASYPL 318


>gi|403302730|ref|XP_003942006.1| PREDICTED: cathepsin S isoform 1 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/342 (38%), Positives = 186/342 (54%), Gaps = 48/342 (14%)

Query: 38  LGIPAGA------------WSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           +G PAG+             S    Q +   +++  +  W K Y ++Y  ++E   R  I
Sbjct: 1   MGAPAGSITMKQLVCVLFVCSSAVTQLHKDPTLDHHWNLWKKTYGKQYKEKNEEAVRRLI 60

Query: 86  YSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQ 138
           +  N++++   N ++     S+ L  N   D+++EE +S       P    R   + S  
Sbjct: 61  WEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNP 120

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              LP SVDWR++G VT VK QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC 
Sbjct: 121 NQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS 180

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
               N+GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D +K+ A T + Y  +P
Sbjct: 181 EKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYD-SKYRAATCSKYTELP 239

Query: 259 -----------------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGE 294
                                  +  +F LY  GV +D  C  ++NHGV V+GYG+ +G+
Sbjct: 240 YGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGK 299

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           +YWLVKNSWG+++GE GYIRMARN  +     CGI    SYP
Sbjct: 300 EYWLVKNSWGSNFGEQGYIRMARNKGNH----CGIASYPSYP 337


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/304 (42%), Positives = 172/304 (56%), Gaps = 39/304 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY S+ E + R  IY  N   +   N        S+++  NKF DL + EF S   G
Sbjct: 38  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 125 Y-NKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           Y +K  N  R  S         + +P SVDWR++GA+TPVKDQGQCGSCWAFS+  A+EG
Sbjct: 98  YQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEG 157

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
               KTGKL+SLSEQ L+DC     N+GCNGG M++AF++I    G+ TE+ YPY  ++D
Sbjct: 158 QTFRKTGKLISLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDD 217

Query: 238 RC--------------------QTDKTKHHAVTITGYE-AIPARY-AFQLYSHGVFDE-Y 274
            C                    + DK K    T+     AI A + +FQ YS GV+ E  
Sbjct: 218 VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPS 277

Query: 275 C-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV VVGYG D+G+ YWLVKNSW   WG+ GYI++ARN  +     CG+   A
Sbjct: 278 CDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKIARNRKNH----CGVATAA 333

Query: 334 SYPV 337
           SYP+
Sbjct: 334 SYPL 337


>gi|62510453|sp|Q8HY82.1|CATS_SAIBB RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497536|gb|AAO13008.1| cathepsin S preproprotein [Saimiri boliviensis]
          Length = 330

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 36/322 (11%)

Query: 46  SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL---- 101
           S    Q +   +++  +  W K Y ++Y  ++E   R  I+  N++++   N ++     
Sbjct: 12  SSAVTQLHKDPTLDHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMH 71

Query: 102 SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVK 158
           S+ L  N   D+++EE +S       P    R   + S     LP SVDWR++G VT VK
Sbjct: 72  SYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVK 131

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
            QG CG+CWAFSAV A+E   KLKTGKLVSLS Q LVDC     N+GCNGG+M +AF++I
Sbjct: 132 YQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYI 191

Query: 219 TKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-------------------- 258
               G+ +E  YPY+  + +CQ D +K+ A T + Y  +P                    
Sbjct: 192 IDNKGIDSEASYPYKATDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVCVG 250

Query: 259 ---ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIR 314
              +  +F LY  GV +D  C  ++NHGV V+GYG+ +G++YWLVKNSWG+++GE GYIR
Sbjct: 251 VDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIR 310

Query: 315 MARNSPSSNIGICGILMQASYP 336
           MARN  +     CGI    SYP
Sbjct: 311 MARNKGNH----CGIASYPSYP 328


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 180/323 (55%), Gaps = 37/323 (11%)

Query: 46  SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL---- 101
           S    Q +   +++  ++ W K Y ++Y  ++E   R  I+  N++ +   N ++     
Sbjct: 12  SSAMAQVHRDPTLDHHWDLWKKTYGKQYEEKNEEVARRLIWEKNLKTVMLHNLEHSMGMH 71

Query: 102 SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASVDWRKEGAVTPVK 158
           S++L  N   D+++EE IS+      P   PR   + S     LP S+DWR++G VT VK
Sbjct: 72  SYELGMNHLGDMTSEEVISSMSSLRVPSQWPRNVTYKSSPNQKLPDSLDWREKGCVTEVK 131

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD-VNSENQGCNGGYMEKAFEF 217
            QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC  V   N+GCNGG+M +AF++
Sbjct: 132 YQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVKYGNKGCNGGFMTEAFQY 191

Query: 218 ITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------------------- 258
           I    G+ +E  YPY+  + RCQ D  K+ A T + Y  +P                   
Sbjct: 192 IIDNNGIDSEASYPYKAMDGRCQYD-VKNRAATCSRYIELPFGSEEALKEAVANKGPVSV 250

Query: 259 ----ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYI 313
                + +F LY  GV +D  C   +NHGV VVGYG  +G+ YWLVKNSWG ++G+ GYI
Sbjct: 251 GIDAKQTSFFLYKTGVYYDPSCTQNVNHGVLVVGYGSLNGKDYWLVKNSWGLNFGDQGYI 310

Query: 314 RMARNSPSSNIGICGILMQASYP 336
           RMARNS +     CGI    SYP
Sbjct: 311 RMARNSGNH----CGIANFPSYP 329


>gi|414875906|tpg|DAA53037.1| TPA: hypothetical protein ZEAMMB73_586844 [Zea mays]
          Length = 1039

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/197 (53%), Positives = 132/197 (67%), Gaps = 24/197 (12%)

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS +AAVEGIN++ TG L+SLSEQELVDCD  S NQGCNGG M+ AFEFI   GG
Sbjct: 713 GSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIINNGG 771

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------Y 261
           + TE DYPY+G + RC  ++     VTI  YE +PA                        
Sbjct: 772 IDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEAAGT 831

Query: 262 AFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            FQLYS G+F   CG  L+HGVTVVGYG ++G+ YW++KNSWG+SWGE+GY+RM RN  +
Sbjct: 832 TFQLYSSGIFTGSCGTALDHGVTVVGYGTENGKDYWIMKNSWGSSWGESGYVRMERNIKA 891

Query: 322 SNIGICGILMQASYPVK 338
           S+ G CGI ++ SYP+K
Sbjct: 892 SS-GKCGIAVEPSYPLK 907


>gi|291398027|ref|XP_002715626.1| PREDICTED: cathepsin S [Oryctolagus cuniculus]
          Length = 331

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/338 (38%), Positives = 181/338 (53%), Gaps = 45/338 (13%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           +L+W L +     S    Q +   +++  +  W K Y ++Y  ++E   R  I+  N+++
Sbjct: 3   WLVWALLVC----SSTVAQLHRDPTLDHHWHLWKKAYGKQYKEKNEEAARRLIWEKNLKF 58

Query: 93  IDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLP 143
           +   N ++     S+ +  N  AD+++EE +S       P+  PR  +V Y       LP
Sbjct: 59  VTLHNLEHSMGMHSYDVGMNHLADMTSEEVVSLMSSLRIPHQWPR--NVTYKLNPNQKLP 116

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-E 202
            SVDWR+ G VT VK QG CG+CWAFSAV A+E   KLKTG LVSLS Q LVDC      
Sbjct: 117 DSVDWRERGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTTKYG 176

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           N+GCNGG+M +AF++I    G+ +E  YPY+  + +C  D +KH A T + Y  +P    
Sbjct: 177 NKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDQKCHYD-SKHRAATCSKYTELPFGSE 235

Query: 259 -------------------ARYAFQLYSHGVFDE-YCGHQLNHGVTVVGYGEDHGEKYWL 298
                              +  +F LY  GV+ E  C   +NHGV  VGYG   G+ YWL
Sbjct: 236 EALKEAVANKGPVSVAIDASHSSFFLYRSGVYYEPSCTQNVNHGVLAVGYGNLKGKDYWL 295

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           VKNSWG  +GE GYIRMARNS +     CGI    SYP
Sbjct: 296 VKNSWGIHFGEQGYIRMARNSKNH----CGIANYPSYP 329


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 190/342 (55%), Gaps = 51/342 (14%)

Query: 33  FLLW---VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSS 88
           F++W   VL +P  +++  YP+    + ++  +E W K + ++Y ++ DE  RR  I+  
Sbjct: 13  FVMWGLKVLLLPVVSFAL-YPE----EILDTHWELWKKTHRKQYNNKVDEISRRL-IWEK 66

Query: 89  NVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG--- 141
           N++YI   N +      +++L  N   D+++EE +    G   P +  R     Y+    
Sbjct: 67  NLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPDWE 126

Query: 142 --LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
              P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC  
Sbjct: 127 GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV- 185

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP- 258
            SEN GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T   A    GY  IP 
Sbjct: 186 -SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPE 243

Query: 259 ----------ARY------------AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGE 294
                     AR             +FQ YS GV +DE C    LNH V  VGYG   G 
Sbjct: 244 GNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGN 303

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           K+W++KNSWG +WG  GYI MARN  ++    CGI   AS+P
Sbjct: 304 KHWIIKNSWGENWGNKGYILMARNKNNA----CGIANLASFP 341


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 180/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G+K+W++KNSWG +WG  GYI MAR
Sbjct: 254 LTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 179/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 17  YPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPPSHTRSNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPQGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANMASFP 327


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 190/342 (55%), Gaps = 51/342 (14%)

Query: 33  FLLW---VLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSS 88
           F++W   VL +P  +++  YP+    + ++  +E W K + ++Y ++ DE  RR  I+  
Sbjct: 13  FVMWGLKVLLLPVVSFAL-YPE----EILDTHWELWKKTHRKQYNNKVDEISRRL-IWEK 66

Query: 89  NVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG--- 141
           N++YI   N +      +++L  N   D+++EE +    G   P +  R     Y+    
Sbjct: 67  NLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPDWE 126

Query: 142 --LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
              P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC  
Sbjct: 127 GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV- 185

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP- 258
            SEN GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T   A    GY  IP 
Sbjct: 186 -SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPE 243

Query: 259 ----------ARY------------AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGE 294
                     AR             +FQ YS GV +DE C    LNH V  VGYG   G 
Sbjct: 244 GNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGN 303

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           K+W++KNSWG +WG  GYI MARN  ++    CGI   AS+P
Sbjct: 304 KHWIIKNSWGENWGNKGYILMARNKNNA----CGIANLASFP 341


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 172/319 (53%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  + E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 27  EEWHTFKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNKYADLLH 86

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N             +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 87  HEFRQLMNGFNYTLHKQLRSTDDSFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 207 DTEKSYPYEAIDDSCHFNKGAIGA-TDRGFTDIPQGDEKKMAEAVATVGPVAVAIDASHE 265

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVGYG D  G+ YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 266 SFQFYSEGVYNEPQCDAQNLDHGVLVVGYGTDESGDDYWLVKNSWGTTWGDKGFIKMLRN 325

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 326 KDNQ----CGIASASSYPL 340


>gi|356514419|ref|XP_003525903.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 343

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/360 (36%), Positives = 187/360 (51%), Gaps = 65/360 (18%)

Query: 5   LFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEER--- 61
           +FI  +T L +  A+D+ ++                   ++   +  K   +S EE    
Sbjct: 11  IFILFFTVLAVSSALDLSII-------------------SYDRSHADKSGWRSDEEVMSI 51

Query: 62  FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIST 121
           +E  L ++ + Y + DE + RF I   N+++++  N+ N ++K+  N+FAD S       
Sbjct: 52  YEEXLAKHGKVYNAIDEMEERFQISKENLKFVEQHNAGNRTYKVGLNRFADRSRM----- 106

Query: 122 YLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKL 181
                +P    R+       L  SVDWRKEGAV  VK Q +C SC  F+ +AAVEGINK+
Sbjct: 107 ---MTRP--SSRYAPRVSDNLSESVDWRKEGAVVRVKTQSECESCRTFTVIAAVEGINKI 161

Query: 182 KTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 241
            TG L +LS     DCD  + N GC+GG  + A EFI   GG+ TE+DYP++G    C  
Sbjct: 162 VTGNLTALS-----DCD-RTVNAGCSGGLADYALEFIINNGGIDTEEDYPFQGAVGIC-- 213

Query: 242 DKTKHHAVTITGYEAIPA-----------------------RYAFQLYSHGVFDEYCGHQ 278
           D+ K +AV   GYE +PA                          FQLY  G+F   CG  
Sbjct: 214 DQYKINAVD--GYERVPAYDELALKKAVANQPVSVAYIEAYGKEFQLYESGIFTGKCGTS 271

Query: 279 LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           ++HGVT VGYG ++G  YW+VKNSWG +WGEAGY+RM RN+     G CGI +   YP+K
Sbjct: 272 IDHGVTAVGYGTENGIDYWIVKNSWGENWGEAGYVRMERNTAEDTAGKCGIAILTLYPIK 331


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 175/320 (54%), Gaps = 42/320 (13%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYS 87
           VL+   L  +G+         P   D Q+    +E++  +Y + Y S E+E  RR   + 
Sbjct: 4   VLAFACLVAVGLA-------LPLSDDNQA---EWESYKAKYGKTYESNENEAARRTIYFM 53

Query: 88  SNVQYIDY---INSQNLSFKLTDNKFADLSNEEFISTYLGYNK--PYNEPRWPSVQYLGL 142
           +  + +++        +S+KL  N FAD+ N EF     GY +  P N         + L
Sbjct: 54  AKEKVMEHNARFEQGLVSYKLGLNSFADMHNGEFRKMMNGYRRGTPRNSVVVHVESNITL 113

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           PASVDWR +GAVTP+K+QGQCGSCWAFS   ++EG + LK GKLVSLSEQELVDC     
Sbjct: 114 PASVDWRTKGAVTPIKNQGQCGSCWAFSTTGSLEGQHALKKGKLVSLSEQELVDCSAAEG 173

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI----- 257
           N GC+GG M+ AF +I K  G+ TE  YPY G++  C   K+   A T+TG+  +     
Sbjct: 174 NDGCDGGLMDDAFTYIKKNNGIDTEQSYPYTGEDGTCSFKKSD-VAATVTGFVDVTSGSE 232

Query: 258 ------------------PARYAFQLYSHGVFD--EYCGHQLNHGVTVVGYGEDHGEKYW 297
                              + + FQLY  GV+D  +    +L+HGV VVGYG D G  YW
Sbjct: 233 SGLQDASATIGPISVAIDASSWDFQLYESGVYDVSDCSTTELDHGVLVVGYGTDDGTAYW 292

Query: 298 LVKNSWGTSWGEAGYIRMAR 317
           LVKNSWGT WG  GYI+M+R
Sbjct: 293 LVKNSWGTDWGHHGYIQMSR 312


>gi|413919735|gb|AFW59667.1| hypothetical protein ZEAMMB73_680472 [Zea mays]
          Length = 344

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/261 (44%), Positives = 153/261 (58%), Gaps = 35/261 (13%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W+  + R Y +  E +RRF ++  N++Y+D  N+       SF+L
Sbjct: 34  YGERSEEEARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRL 93

Query: 106 TDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQ 160
             N+FADL+N+E+ +TYLG        R    +YL      LP SVDWR +GAV  VKDQ
Sbjct: 94  GLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEVKDQ 153

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G CGSCWAFS +AAVEGIN++ TG ++SLSEQELVDCD  S NQGCNGG M+ AFEFI  
Sbjct: 154 GSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT-SYNQGCNGGLMDYAFEFIIN 212

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+ TE+DYPY+G + RC  ++     VTI  YE +PA                     
Sbjct: 213 NGGIDTEEDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQPISVAIEA 272

Query: 261 --YAFQLYSHGVFDEYCGHQL 279
              AFQLY+ G+F   CG+ +
Sbjct: 273 GGRAFQLYNSGIFTGTCGNSV 293


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 182/322 (56%), Gaps = 44/322 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNK 109
           DP+ ++  ++ W   + ++Y   +E  RR  ++  N++ I+  N  +     S+KL  N+
Sbjct: 127 DPE-LDGHWQLWKSWHRKDYHEREEGWRRV-VWEKNLKMIEIHNLDHALGKHSYKLGMNQ 184

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCG 164
           F D++ EEF     GY    +E ++   Q+L       P SVDWR++G VTPVKDQGQCG
Sbjct: 185 FGDMTTEEFRQLMNGYVHKKSERKYRGSQFLEPNFLEAPRSVDWREKGYVTPVKDQGQCG 244

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS   A+EG +  KTGKLVSLSEQ LVDC     NQGCNGG M++AF+++   GG+
Sbjct: 245 SCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGI 304

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------- 261
            +E+ YPY  K+D     K +++A   TG+  IP  +                       
Sbjct: 305 DSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHS 364

Query: 262 AFQLYSHGVFDE--YCGHQLNHGVTVVGY---GED-HGEKYWLVKNSWGTSWGEAGYIRM 315
           +FQ Y  G++ E       L+HGV VVGY   GED  G+KYW+VKNSWG  WG+ GYI M
Sbjct: 365 SFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYM 424

Query: 316 ARNSPSSNIGICGILMQASYPV 337
           A++  +     CGI   ASYP+
Sbjct: 425 AKDRKNH----CGIATAASYPL 442


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/352 (38%), Positives = 194/352 (55%), Gaps = 55/352 (15%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           ML  AVL++ L   L  P+           DPQ ++E ++ W   ++++Y  ++E  RR 
Sbjct: 1   MLPVAVLAVCLSAALSAPS----------LDPQ-LDEHWDLWKSWHTKKYHEKEEGWRRM 49

Query: 84  GIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKP----YNEPRWP 135
            ++  N++ I+  N ++     +++L  N F D+++EEF     GY +     +    + 
Sbjct: 50  -VWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMYGYKRKSERKFKGSLFM 108

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
              +L  P SVDWR  G VTPVKDQGQCGSCWAFS   A+EG +  KTGKLVSLSEQ LV
Sbjct: 109 EPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSLSEQNLV 168

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR-CQTDKTKHHAVTITGY 254
           DC     N+GCNGG M++AF++I    G+ +ED YPY G +D+ C  D  K+++   TG+
Sbjct: 169 DCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYD-PKYNSANDTGF 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVF--DEYCGHQLNHGVTVVGY- 288
             IP+                         +FQ Y  G++   E    +L+HGV VVGY 
Sbjct: 228 IDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLVVGYG 287

Query: 289 --GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             GED  G+KYW+VKNSW   WG+ GYI MA++  +     CGI   ASYP+
Sbjct: 288 FEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNH----CGIATAASYPL 335


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/306 (41%), Positives = 173/306 (56%), Gaps = 39/306 (12%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYL 123
           ++++ Y   +E   R  I+++N ++I   N+ +     SF +  N+FAD++  EF     
Sbjct: 47  EHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEFADMTVHEFAQMMN 106

Query: 124 GYNKPYNEPRWPSVQYLG------LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           G  KP +  R     YL       LP  VDWR +G V+ VK+QG CGSCWAFS   ++EG
Sbjct: 107 GL-KP-DSTRVSGSTYLSPNIDAPLPVEVDWRTKGLVSEVKNQGSCGSCWAFSTTGSLEG 164

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
            +  KTG +V LSEQ LVDC  +  N GCNGG M  AF++I    G+ TE+ YPY G++ 
Sbjct: 165 QHMRKTGTMVDLSEQNLVDCSTSYGNDGCNGGLMTNAFKYIKDNKGIDTEEAYPYAGRDG 224

Query: 238 RCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQLYSHGVFDE- 273
            C+  K K  A T+TG+  IPA                         +F LY  GV+DE 
Sbjct: 225 DCKFKKNKVGA-TVTGFVEIPAGNEKKLQEALATVGPVSVAIDANHQSFMLYKSGVYDEP 283

Query: 274 YC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS-PSSNIGICGILM 331
            C   QL+HGV  VGYG  HG+ Y++VKNSWGT+WGE GYIR +  + P +  GICGIL+
Sbjct: 284 ECDSAQLDHGVLAVGYGSIHGKDYYIVKNSWGTTWGEQGYIRFSTTAVPDAIGGICGILL 343

Query: 332 QASYPV 337
            ASYPV
Sbjct: 344 DASYPV 349


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 169/302 (55%), Gaps = 39/302 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLG 124
           + + Y ++ E   R  ++  N + ID  N++      S+K+  N   DL   EF +   G
Sbjct: 20  HGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFKALMNG 79

Query: 125 YNKPYNEPR-----WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGIN 179
           + K  N  R      PS +   LP SVDWR+ GAVTPVKDQG CGSCW+FSA  ++EG  
Sbjct: 80  FKKTPNAERNGKIYVPSNE--NLPKSVDWRQRGAVTPVKDQGHCGSCWSFSATGSLEGQL 137

Query: 180 KLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC 239
            LKTG+LVSLSEQ LVDC     N GC GG M +AF+++    G+ TE  YPY  + + C
Sbjct: 138 FLKTGRLVSLSEQNLVDCSKTYGNSGCEGGLMNQAFQYVRDNKGIDTEASYPYEARENNC 197

Query: 240 Q-------------------TDKTKHHAVTITGYEAI---PARYAFQLYSHGVFDE-YCG 276
           +                   ++K    AV   G  ++    +  +FQ YS GV+ E YC 
Sbjct: 198 RFKEDKVGGTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESFQFYSEGVYKEQYCS 257

Query: 277 -HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
             QL+HGV  VGYG ++G+ YWLVKNSWG SWGE+GYI++ARN  +     CGI   ASY
Sbjct: 258 PSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHKNH----CGIASMASY 313

Query: 336 PV 337
           PV
Sbjct: 314 PV 315


>gi|357446979|ref|XP_003593765.1| Cysteine proteinase [Medicago truncatula]
 gi|355482813|gb|AES64016.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/290 (41%), Positives = 170/290 (58%), Gaps = 34/290 (11%)

Query: 78  EWQRRFGIYSSNVQYID-YINSQNLSFKLTDNKFADLSNEEFISTYLGY--NKPYNEPRW 134
           E ++R  I+ +N++YI+ + N+ N S+KL  N+++DL+++EF++++ G   +K  +  + 
Sbjct: 78  ELEKRKRIFKNNLEYIENFNNAGNKSYKLGLNQYSDLTSDEFLASHTGLKVSKQLSSSKM 137

Query: 135 PSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSL 189
            S          +P + DWR++GAVT VKDQG CG CWAFS VAAVEG  K+ TG+L+SL
Sbjct: 138 RSAAVPFNLNDDVPTNFDWRQQGAVTDVKDQGSCGCCWAFSVVAAVEGAVKINTGELISL 197

Query: 190 SEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAV 249
           SEQ+LVDCD    N GC+GG M+ AF++I +  G+ +E DYPY+  +  CQ +       
Sbjct: 198 SEQQLVDCD--ERNSGCHGGNMDSAFKYIIQ-KGIVSEADYPYQEGSQTCQLNDQMKFEA 254

Query: 250 TITGYEAIPAR---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGY 288
            IT +  +PA                        FQ Y   V+   CG  +NH VT VGY
Sbjct: 255 QITNFIDVPANDEQQLLQAVAQQPVSVGIEVGDEFQHYMGDVYSGTCGQSMNHAVTAVGY 314

Query: 289 G-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           G  + G KYWL+KNSWG  WGE GY+++ R S     G CGI   ASYP+
Sbjct: 315 GVSEDGTKYWLIKNSWGKGWGEEGYMKLLRESGEPG-GQCGIAAHASYPI 363


>gi|395514298|ref|XP_003761356.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 365

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 191/375 (50%), Gaps = 85/375 (22%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           ++SL L  V  IP          K D ++++ ++  W  Q+ R+YG  ++W+R   I+  
Sbjct: 7   LVSLCLGLVAAIP----------KLD-RTLDAQWYQWKAQHRRDYGENEDWRR--AIWEK 53

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN----------KPYNEP-- 132
           N++ I+  N +      SF++  NKF D++NEEF     G++          + + EP  
Sbjct: 54  NLRSIEMHNLEYSAGKHSFQMEMNKFGDMTNEEFRQVMNGFSTHRVQRRTKGRLFREPLL 113

Query: 133 -------RWPSVQYLG------------------LPASVDWRKEGAVTPVKDQGQCGSCW 167
                   W    Y+                   +P SVDWR +G VTPVK+QGQCGSCW
Sbjct: 114 VQIPKSVDWRDKGYVTPVKNQLVRRLFREPLLVQIPKSVDWRDKGYVTPVKNQGQCGSCW 173

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA  ++EG    KTGKLVSLSEQ LVDC     N GC GG M+ AFE++ + GG+ TE
Sbjct: 174 AFSATGSLEGQWFRKTGKLVSLSEQNLVDCSTAQGNSGCQGGLMDNAFEYVKENGGIDTE 233

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARY-----------------------AFQ 264
           + YPY   +D CQ  K ++    ITGY  IP+R                        +FQ
Sbjct: 234 ESYPYIAADDTCQY-KPQYSGANITGYVDIPSRMEKALEKAVATVGPISVAIDAGHSSFQ 292

Query: 265 LYSHGVF--DEYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            Y  GV+   E     L+HGV  VGYG +    KYW+VKNSWG  WG++GYI MAR+  +
Sbjct: 293 FYRSGVYYEPECSSEDLDHGVLAVGYGVQGKNGKYWIVKNSWGEEWGDSGYILMARDRNN 352

Query: 322 SNIGICGILMQASYP 336
                CGI   ASYP
Sbjct: 353 H----CGIATAASYP 363


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 182/320 (56%), Gaps = 43/320 (13%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLT 106
           +Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L 
Sbjct: 18  QYPEEILDTQWEQWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELA 76

Query: 107 DNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQG 161
            N   D+++EE +    G   P +  R    +Y+      +P S+D+RK+G VTPVK+QG
Sbjct: 77  MNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTRYVPDWEGKVPDSIDYRKKGYVTPVKNQG 136

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF ++ K 
Sbjct: 137 QCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFHYVQKN 194

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY--------- 261
            G+ +ED YPY G+++ C  + T   A    GY+ IP           AR          
Sbjct: 195 QGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDA 253

Query: 262 ---AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
              +FQ YS GV +D+ C    LNH V  VGYG    +K+W++KNSWG SWG  GYI MA
Sbjct: 254 SLTSFQFYSKGVYYDKNCNSDNLNHAVLAVGYGIQKRKKHWIIKNSWGESWGNKGYILMA 313

Query: 317 RNSPSSNIGICGILMQASYP 336
           RN  ++    CGI   AS+P
Sbjct: 314 RNKNNA----CGIANLASFP 329


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 173/319 (54%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  + E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 27  EEWHTFKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 86

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N           + +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 87  HEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 207 DTEKSYPYEAIDDSCHFNKGTIGA-TDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHE 265

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  G+ YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 266 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRN 325

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 326 KENQ----CGIASASSYPL 340


>gi|61661067|gb|AAX51229.1| cathepsin S cysteine protease [Paralichthys olivaceus]
          Length = 337

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 182/344 (52%), Gaps = 46/344 (13%)

Query: 26  RNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGI 85
           R  +L+  LL  L + A A  +          ++  +E W K + + Y +E E  RR  +
Sbjct: 7   RGLMLASLLLVSLCVEAAAMLD--------VRLDVHWELWKKSHGKTYPNEVEDVRRREL 58

Query: 86  YSSNVQYIDYIN---SQNL-SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG 141
           +  N+  I   N   S  L ++ L+ N   DL+ EE + +Y     P +  R P+  ++G
Sbjct: 59  WERNLMLITKHNLEASMGLQTYDLSMNHMGDLTTEEIMQSYATLTPPADIQRAPA-PFVG 117

Query: 142 ----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
               +P SVDWR +G VT VK QG CGSCWAFSA  A+EG     TGKLV LS Q LVDC
Sbjct: 118 SGADVPVSVDWRLQGCVTSVKMQGSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDC 177

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
            +   N+GCNGG+M++AF+++    G+ +E  YPYRG+  +C  + + + A   + Y  +
Sbjct: 178 SLKYGNKGCNGGFMDRAFQYVIDNKGIDSEASYPYRGQLQQCSYNPS-YRAANCSRYSFL 236

Query: 258 P-----------------------ARYAFQLYSHGVF-DEYCGHQLNHGVTVVGYGEDHG 293
           P                        R  F  Y  GV+ D  C  ++NHGV  VGYG + G
Sbjct: 237 PEGDEGALKNALATIGPISVAIDATRPTFAFYRSGVYNDPTCTQRVNHGVLAVGYGTESG 296

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           + YWLVKNSWGTS+G+ GYIRM+RN        CGI +  SYP+
Sbjct: 297 QDYWLVKNSWGTSFGDKGYIRMSRNKNDQ----CGIALYCSYPI 336


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/314 (41%), Positives = 179/314 (57%), Gaps = 39/314 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           +  ++E +   + + Y S+ E   R+ I++ N   I   N++     +S+KL  N+F DL
Sbjct: 3   LRTQWEAFKTTHKKSYQSKMEELLRYKIFTENSLLIAKHNAKYAKGLVSYKLGMNQFGDL 62

Query: 114 SNEEFISTYLGYN---KPYNEPRWP--SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
              EF   + GY+   K       P  +V    LP +VDWRK+GAVTPVKDQGQCGSCWA
Sbjct: 63  LPHEFAKMFNGYHGERKGRGSTFLPPANVNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWA 122

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  ++EG + LK+GKLVSLSEQ L+DC  +  N+GC GG M+ AF++I    G+ TE+
Sbjct: 123 FSATGSLEGQHFLKSGKLVSLSEQNLIDCSGSFGNEGCGGGLMDNAFKYIKANDGIDTEE 182

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY-AFQL 265
            YPY   +  C+  K +    T TG+                       AI A + +FQL
Sbjct: 183 SYPYEAMDGDCRF-KKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDASHSSFQL 241

Query: 266 YSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           YS GV+DE      +L+HGV  VGYG  +G+KYWLVKNSW  +WG+ GYI M+R+  +  
Sbjct: 242 YSEGVYDEPNCSSEELDHGVLAVGYGVKNGKKYWLVKNSWAETWGDNGYILMSRDKDNQ- 300

Query: 324 IGICGILMQASYPV 337
              CGI   ASYP+
Sbjct: 301 ---CGIASSASYPL 311


>gi|313118760|gb|ADR32292.1| C14 cysteine protease [Solanum stoloniferum]
          Length = 217

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           N+GC+GG M+ AFEF+   GG+ +E+DYPY+ +ND C   +     V I  YE +P    
Sbjct: 61  NEGCDGGLMDYAFEFVINNGGIDSEEDYPYKERNDVCDQYRKNAKVVKIDSYEDVPVNNE 120

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV   GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVAAGYGTENGMDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG +WGE GY+R+ RN  SS+ G+CG+  + SYPVK
Sbjct: 181 NSWGANWGEKGYLRVQRNIASSS-GLCGLATEPSYPVK 217


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 175/316 (55%), Gaps = 42/316 (13%)

Query: 56  QSMEERFENWLKQYSREYGS-EDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKF 110
           Q+++ ++  W  Q+ R Y + ED W+R    +  N++ I+  N    +   SF+L  NKF
Sbjct: 23  QTLDSQWHQWKAQHRRTYAANEDGWRR--ATWEKNLKMIEMHNLEYSAGKHSFQLGMNKF 80

Query: 111 ADLSNEEFISTYLGYNKPYNEPRWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGS 165
            D++ EEF     GYN   ++ R     Y       LP SVDWR++G VTPVK+QGQCGS
Sbjct: 81  GDMTTEEFKQVMNGYNSNGSQKRTKGSLYREPLLAQLPKSVDWREKGYVTPVKNQGQCGS 140

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFSA  ++EG    KT KLVSLSEQ LVDC  +  N GC+GG M+ AFE++   GG+ 
Sbjct: 141 CWAFSATGSLEGQWFHKTKKLVSLSEQNLVDCSTSEGNNGCSGGLMDNAFEYVKNNGGID 200

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYA 262
           TE  YPY G+++ C+  + +     +TG+  IP+                         +
Sbjct: 201 TEQAYPYLGQDNECKY-RAECSGANVTGFVDIPSMNERALMKAVANVGPISVAIDAGNPS 259

Query: 263 FQLYSHGVFDE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           FQ Y  GV+ E      QL+HGV VVGYG    ++YW+VKNSWG  WG+ GY+ MA+   
Sbjct: 260 FQFYESGVYYEPQCSSSQLDHGVLVVGYGSIGKDEYWIVKNSWGEEWGKKGYVLMAKFRN 319

Query: 321 SSNIGICGILMQASYP 336
           +     CGI   ASYP
Sbjct: 320 NH----CGIATAASYP 331


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/352 (38%), Positives = 194/352 (55%), Gaps = 55/352 (15%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           ML  AVL++ L   L  P+           DPQ ++E ++ W   ++++Y  ++E  RR 
Sbjct: 1   MLPVAVLAVCLSAALSAPS----------LDPQ-LDEHWDLWKSWHTKKYHEKEEGWRRM 49

Query: 84  GIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKP----YNEPRWP 135
            ++  N++ I+  N ++     +++L  N F D+++EEF     GY +     +    + 
Sbjct: 50  -VWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMNGYKRKSERKFKGSLFM 108

Query: 136 SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195
              +L  P SVDWR  G VTPVKDQGQCGSCWAFS   A+EG +  KTGKLVSLSEQ LV
Sbjct: 109 EPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSLSEQNLV 168

Query: 196 DCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR-CQTDKTKHHAVTITGY 254
           DC     N+GCNGG M++AF++I    G+ +ED YPY G +D+ C  D  K+++   TG+
Sbjct: 169 DCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYD-PKYNSANDTGF 227

Query: 255 EAIPA-----------------------RYAFQLYSHGVF--DEYCGHQLNHGVTVVGY- 288
             IP+                         +FQ Y  G++   E    +L+HGV VVGY 
Sbjct: 228 IDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLVVGYG 287

Query: 289 --GED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
             GED  G+KYW+VKNSW   WG+ GYI MA++  +     CGI   ASYP+
Sbjct: 288 FEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNH----CGIATAASYPL 335


>gi|129614|sp|P00784.1|PAPA1_CARPA RecName: Full=Papain; AltName: Full=Papaya proteinase I; Short=PPI;
           AltName: Allergen=Car p 1; Flags: Precursor
 gi|167391|gb|AAB02650.1| papain precursor [Carica papaya]
 gi|387885|gb|AAA72774.1| papain [synthetic construct]
 gi|225437|prf||1303270A papain
          Length = 345

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 188/341 (55%), Gaps = 41/341 (12%)

Query: 30  LSLFLLWVLGIPAGAWS-EGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRFGI 85
           +++ L   +G+  G +S  GY Q  D  S E   + FE+W+ ++++ Y + DE   RF I
Sbjct: 13  VAICLFVYMGLSFGDFSIVGYSQN-DLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEI 71

Query: 86  YSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRWPSVQYLG- 141
           +  N++YID  N +N S+ L  N FAD+SN+EF   Y G    N    E  +  V   G 
Sbjct: 72  FKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGD 131

Query: 142 --LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDV 199
             +P  VDWR++GAVTPVK+QG CGSCWAFSAV  +EGI K++TG L   SEQEL+DCD 
Sbjct: 132 VNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR 191

Query: 200 NSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI-- 257
            S   GCNGGY   A + + +  G+   + YPY G    C++ +   +A    G   +  
Sbjct: 192 RS--YGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQP 248

Query: 258 --------------------PARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYW 297
                                A   FQLY  G+F   CG++++H V  VGYG +    Y 
Sbjct: 249 YNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN----YI 304

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           L+KNSWGT WGE GYIR+ R + +S  G+CG+   + YPVK
Sbjct: 305 LIKNSWGTGWGENGYIRIKRGTGNS-YGVCGLYTSSFYPVK 344


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +F+L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYTSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTFELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPTSFSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 186/336 (55%), Gaps = 41/336 (12%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           +L+W L + + A ++ +    DP +++  ++ W K Y ++Y  ++E   R  I+  N++ 
Sbjct: 14  WLVWALLLCSSAMAQVH---RDP-TLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKT 69

Query: 93  IDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPAS 145
           +   N ++     S++L  N   D+++EE IS       P   PR   + S     LP S
Sbjct: 70  VTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPNQKLPDS 129

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQ 204
           +DWR++G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+
Sbjct: 130 MDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNK 189

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D  K+ A T + Y  +P      
Sbjct: 190 GCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYD-VKNRAATCSRYIELPFGSEEA 248

Query: 259 -----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                            +  +F LY  GV +D  C   +NHGV VVGYG   G+ YWLVK
Sbjct: 249 LKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVK 308

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           NSWG  +G+ GYIRMARNS +     CGI    SYP
Sbjct: 309 NSWGLHFGDQGYIRMARNSGNH----CGIASYPSYP 340


>gi|50657029|emb|CAH04632.1| cathepsin L [Suberites domuncula]
          Length = 324

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 174/308 (56%), Gaps = 35/308 (11%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS--QNLSFKLTDNKFADLSNEE 117
           E +  W +++S+EY  E E  RR  I+ SN ++ID  NS      + L  N+F DLS  E
Sbjct: 21  EEWVAWKQEHSKEYTEELEELRRHTIWQSNKKFIDSHNSVSDKFGYTLEMNEFGDLSGVE 80

Query: 118 FISTYLGY---NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           F   Y GY    +  +   + +  Y+   ASVDWR++G V+ VK+QGQCGSCW+FSA  +
Sbjct: 81  FKQIYNGYIMQERANDTKLFTASPYMEPAASVDWRQKGVVSEVKNQGQCGSCWSFSATGS 140

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EG + LK G+LVSLSEQ L+DC     N GC GG M+ AF ++    GV TE  YPY  
Sbjct: 141 LEGQHALKMGRLVSLSEQNLMDCSSRFGNHGCKGGIMDDAFRYVISNHGVDTESSYPYTA 200

Query: 235 KNDRCQTDKTKHHAVTITGYE----------------------AIPARY-AFQLYSHGVF 271
           K+  C+ ++    A T T Y                       AI A + +FQ Y +GV+
Sbjct: 201 KDGYCRFNQNNVGA-TETSYRDIARGSESSLTQASAQIGPISVAIDASHRSFQFYKNGVY 259

Query: 272 DE--YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
            E      +L+HGV VVGYG + G+ Y++VKNSWGT WG  GYI M+RN  ++    CGI
Sbjct: 260 YEPSCSSSRLDHGVLVVGYGTEGGQDYFIVKNSWGTRWGMDGYIMMSRNRRNN----CGI 315

Query: 330 LMQASYPV 337
             QASYP+
Sbjct: 316 ASQASYPI 323


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 187/343 (54%), Gaps = 48/343 (13%)

Query: 30  LSLFLL-WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           LSL L  + LGI + A       K+D Q+++ ++  W   + R YG+ +E  RR  ++  
Sbjct: 3   LSLVLAAFCLGIASAA------PKFD-QNLDTQWYQWKATHRRLYGTNEEGWRR-AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGY--NKPYNEPRWPSVQYLGL 142
           N++ I+  N +       F +  N F D++NEEF    + +   K  N   +     L L
Sbjct: 55  NMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQVMVCFRNQKHKNRKVFRGPLLLNL 114

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWRK+G VTPVK+Q QCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC     
Sbjct: 115 PKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSHPQG 174

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA--- 259
           NQGCNGG+M  AF+++ + GG+ +E  YPY  K+  C+  K ++     TG+  IPA   
Sbjct: 175 NQGCNGGFMNNAFQYVKENGGLDSEASYPYVAKDGSCKY-KPENSVANDTGFVVIPAHEK 233

Query: 260 -------------------RYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG----EDHGE 294
                                +FQ Y  G+ F++ C  + L+HGV VVGYG      +  
Sbjct: 234 ELMKAVATVGPISVAVDASHSSFQFYKSGIYFEQDCSSKNLDHGVLVVGYGFEGTNSNNN 293

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YWL+KNSWG  WG  GYI++A++  +     CGI   ASYP+
Sbjct: 294 NYWLIKNSWGPEWGSNGYIKIAKDRNNH----CGIATAASYPI 332


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 171/314 (54%), Gaps = 45/314 (14%)

Query: 64  NWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS----QNLSFKLTDNKFADLSNEEFI 119
           N+  ++ + Y  E E + R  IY  N   I   N     + ++++L  NK+ D+ N EF 
Sbjct: 30  NFKMEHKKCYKHEAEERLRMKIYMKNKLQIAQHNCDYELKKVTYRLKINKYGDMLNHEFK 89

Query: 120 STYLGYNKPYNEP----RWPSVQY------LGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           +   GYN+  N      R P          + LP  VDWRK GAVT VKDQG CGSCWAF
Sbjct: 90  NMLNGYNRTINHTLRNERLPVGAAFIEPCNVELPKMVDWRKCGAVTEVKDQGHCGSCWAF 149

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA  ++EG +  +TG LVSLSEQ L+DC  +  N GCNGG M++AF +I    G+ TE  
Sbjct: 150 SATGSLEGQHFRRTGVLVSLSEQNLIDCSGSYGNNGCNGGLMDQAFSYIKDNKGLDTEKT 209

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLY 266
           YPY G++D+C+ DK    A  + G+  IP                       +  +FQ Y
Sbjct: 210 YPYEGEDDKCRYDKRSSGASDV-GFVDIPVGDEQKLKAAVATVGPVSVAIDASHQSFQFY 268

Query: 267 SHGV-FDEYCGH-QLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           S G+ F+  C    L+HGV VVGYG D  G  YW+VKNSWG SWGE GYI+MARN  +  
Sbjct: 269 SDGIYFEPECSSTNLDHGVLVVGYGTDEEGRDYWIVKNSWGESWGEKGYIKMARNIDNH- 327

Query: 324 IGICGILMQASYPV 337
              CGI   ASYP+
Sbjct: 328 ---CGIASSASYPI 338


>gi|313118766|gb|ADR32295.1| C14 cysteine protease [Solanum demissum]
 gi|313118774|gb|ADR32299.1| C14 cysteine protease [Solanum verrucosum]
 gi|313118776|gb|ADR32300.1| C14 cysteine protease [Solanum verrucosum]
 gi|313118778|gb|ADR32301.1| C14 cysteine protease [Solanum verrucosum]
          Length = 217

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 135/218 (61%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           N+GC+GG M+ AFEF+   GG+ +E+DYPY+ +ND C   +     V I  YE +P    
Sbjct: 61  NEGCDGGLMDYAFEFVINNGGIDSEEDYPYKERNDVCDQYRKNAKVVKIDSYEDVPVNNE 120

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV   GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVAAGYGTENGMDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG  WGE GY+R+ RN  SS+ G+CG+  + SYPVK
Sbjct: 181 NSWGAKWGEKGYLRVQRNIASSS-GLCGLATEPSYPVK 217


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 172/319 (53%), Gaps = 46/319 (14%)

Query: 60  ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSN 115
           E +  +  ++ + Y  + E + R  I++ N   I   N +     +SFKL  NK+ADL +
Sbjct: 27  EEWHTFKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 86

Query: 116 EEFISTYLGYN-----------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
            EF     G+N             +    + S  ++ LP SVDWR +GAVT VKDQG CG
Sbjct: 87  HEFRQLMNGFNYTLHKQLRATDDSFKGVTFISPAHVTLPKSVDWRSKGAVTAVKDQGHCG 146

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFS+  A+EG +  K+G LVSLSEQ LVDC     N GCNGG M+ AF +I   GG+
Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARY 261
            TE  YPY   +D C  +K    A T  G+  IP                       +  
Sbjct: 207 DTEKSYPYEAIDDSCHFNKGTIGA-TDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHE 265

Query: 262 AFQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARN 318
           +FQ YS GV++E  C  Q L+HGV VVG+G D  G+ YWLVKNSWGT+WG+ G+I+M RN
Sbjct: 266 SFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRN 325

Query: 319 SPSSNIGICGILMQASYPV 337
             +     CGI   +SYP+
Sbjct: 326 KDNQ----CGIASASSYPL 340


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/316 (40%), Positives = 173/316 (54%), Gaps = 41/316 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
            +E +  W  ++ + Y S++E   R  I+  N+  +   N +    + ++ L  N+FADL
Sbjct: 24  FDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADL 83

Query: 114 SNEEFISTYLGY------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCW 167
            NEEF++   G+               PS     LP +VDWR +G VTPVKDQGQCGSCW
Sbjct: 84  KNEEFVAMMTGFRVNGTSKAAKGSTFLPSNNIGELPKTVDWRTKGYVTPVKDQGQCGSCW 143

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS   ++EG +   TGKLVSLSEQ LVDC     N+GC+GG M++AF++I K GG+ TE
Sbjct: 144 AFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGKEGNEGCDGGLMDQAFQYIIKAGGIDTE 203

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYE----------------------AIPARY-AFQ 264
           + YPY+  +  C   K    A T+TGY                       AI A + +FQ
Sbjct: 204 ESYPYKAVDGECHFKKANIGA-TVTGYTDVTSDSETALQKAVAHIGPISVAIDASHMSFQ 262

Query: 265 LYSHGVFDE-YCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           LY  GV++E  C    L+HGV  VGYG    G  YW+VKNSW  +WG  GY+ M+RN  +
Sbjct: 263 LYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNKDN 322

Query: 322 SNIGICGILMQASYPV 337
                CGI  QASYP+
Sbjct: 323 Q----CGIATQASYPL 334


>gi|94480716|emb|CAI91577.1| cathepsin L [Aphrocallistes vastus]
          Length = 329

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/339 (39%), Positives = 187/339 (55%), Gaps = 49/339 (14%)

Query: 32  LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQ 91
           +FLL  LG+ AGA      +  + Q     +E W  +Y+R YG ++E +++  I+++N+ 
Sbjct: 4   VFLL--LGLFAGACVCLQCETEEVQDFA--WEGWKLKYNRSYGLDEELRKK--IWANNML 57

Query: 92  YIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWP----------SVQYLG 141
           Y+   N++  S+KL  N+FADL+N E+   YLGY+   NE R             ++   
Sbjct: 58  YVKEFNAEGHSYKLAANQFADLTNLEYRQIYLGYD---NEARLSRKREGKVFQRKMKDED 114

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP +VDWR +G VTPVK+QGQCGSCW+FSA  ++EG   +K+GKLVS SEQELVDC  + 
Sbjct: 115 LPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGSLEGQYAIKSGKLVSFSEQELVDCSTSL 174

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC----QTDKTKHHAVTITGYEAI 257
            N GC GG M+ AF++  +      E DY Y  KN +C    Q   TK  + T    E  
Sbjct: 175 GNHGCQGGLMDYAFKYW-ETNLAEKESDYTYTAKNGKCKYNAQLGVTKDSSFTDIPSENC 233

Query: 258 PA------------------RYAFQLYSHGVFDEY-CGH-QLNHGVTVVGYGEDHGEKYW 297
            A                    +FQ+Y  G++  + C   +L+HGV VVGYG D+G  YW
Sbjct: 234 DALKEAVANKGPIAVAMDASHTSFQMYHSGIYTPFLCSKTKLDHGVLVVGYGTDNGVDYW 293

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           L+KNSWG +WG  GY ++   S       CGI  QASYP
Sbjct: 294 LIKNSWGMAWGMDGYFKIEMKSDK-----CGICTQASYP 327


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 179/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTQWELWKKTYGKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPPSHSRNNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 254 LTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREY-GSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y G  DE  RR  I+  N++YI   N +      +++L+ 
Sbjct: 17  YPEEILDTQWELWKKTYQKQYNGKVDELSRRL-IWEKNLKYISIHNLEASLGVHTYELSM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D++NEE +    G   P          Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTNEEVVQKMTGLKVPPAHSHSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ +  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQQNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  +P           AR           
Sbjct: 194 GIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREVPVGNEKALKRAVARVGPISVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C G  LNH V  VGYG   G K+W++KNSWG +WG  GY+ +AR
Sbjct: 253 LTSFQFYSKGVYYDESCDGDNLNHAVLAVGYGIQRGHKHWILKNSWGENWGNKGYVLLAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNT----CGIANLASFP 327


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 179/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ +++ W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTQWDLWKKTYRKQYNSKVDELSRRL-IWEKNLKHISIHNLEASLGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 254 LTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 176/312 (56%), Gaps = 45/312 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI---DYINSQN-LSFKLTDNKFADL 113
           ++E++ ++  Q+S+ Y SE E + R  I+  N   +     + SQ  + FKL  NK+AD+
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHSKLFSQGFVKFKLGLNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNE----------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
            + EF+ST  G+NK  N            R+ S   + LP +VDWR +GAVT VKDQG C
Sbjct: 83  LHHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHC 142

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCW+FS   ++EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG
Sbjct: 143 GSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKDNGG 202

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE----------------------AIPARY 261
           + TE  YPY  ++++C   KT++   T  G+                       AI A Y
Sbjct: 203 IDTEQSYPYLAEDEKCHY-KTQNSGATDKGFVDIEEGNEDDLKAAVATVGPISIAIDASY 261

Query: 262 -AFQLYSHGVFD--EYCGHQLNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             FQLYS GV+   E    +L+HGV VVGYG  D G+ YWLVKNSW  S G  GYI+MAR
Sbjct: 262 ETFQLYSDGVYSDPECISQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMAR 321

Query: 318 NSPSSNIGICGI 329
           N  +    +CG+
Sbjct: 322 NQDN----MCGV 329


>gi|356582227|ref|NP_001239115.1| cathepsin L1 precursor [Canis lupus familiaris]
 gi|62899810|sp|Q9GL24.1|CATL1_CANFA RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|10185020|emb|CAC08809.1| cathepsin L [Canis lupus familiaris]
          Length = 333

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 184/346 (53%), Gaps = 56/346 (16%)

Query: 31  SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           SLFL  + LGI + A       K+D QS+  ++  W   + R YG  +E  RR  ++  N
Sbjct: 4   SLFLTALCLGIASAA------PKFD-QSLNAQWYQWKATHRRLYGMNEEGWRR-AVWEKN 55

Query: 90  VQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQ 138
           ++ I+  N +       F +  N F D++NEEF     G+        K + EP +  + 
Sbjct: 56  MKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEI- 114

Query: 139 YLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
               P SVDWR++G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC 
Sbjct: 115 ----PKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS 170

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
               N+GCNGG M+ AF ++   GG+ +E+ YPY G++      K +  A   TG+  +P
Sbjct: 171 RAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP 230

Query: 259 AR----------------------YAFQLYSHGV-FDEYCGHQ-LNHGVTVVGY---GED 291
            R                       +FQ Y  G+ FD  C  + L+HGV VVGY   G D
Sbjct: 231 QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTD 290

Query: 292 HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
              K+W+VKNSWG  WG  GY++MA++  +     CGI   ASYP 
Sbjct: 291 SNNKFWIVKNSWGPEWGWNGYVKMAKDQNNH----CGIATAASYPT 332


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 181/321 (56%), Gaps = 51/321 (15%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI---DYINSQNLS-FKLTDNKFADL 113
            E+ ++++   + R YG  +E QR+  ++ +N++ I   ++++ Q  S +++  N+FAD+
Sbjct: 39  FEKLWQDFKTVHERTYGETEESQRK-EVFRNNLKKIQAHNHLHEQGKSPYRMGINQFADM 97

Query: 114 SNEEFISTYLGY------------NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
              EF S   G+            +  Y  P  P    + +PA VDWRKEG VTPVK+QG
Sbjct: 98  EANEFASIMNGFRMNNRTEVRDHLHANYISPAIP----VSVPAEVDWRKEGYVTPVKNQG 153

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCGSCWAFS   ++EG +  KTGKLVSLSEQ LVDC  +  N+GCNGG ++ AF++I   
Sbjct: 154 QCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTSYGNEGCNGGIVDYAFQYIKDN 213

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------- 258
            G  TE  YPY   +  C+  K+     T TGY  +P                       
Sbjct: 214 DGDDTEACYPYEAVDGTCRF-KSVCVGATCTGYTDLPKGDEAKMKEAVALVGPVSVAIDA 272

Query: 259 ARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
           +  +FQ+Y  G++   E    QL+H V VVGYG + G+ YWLVKNSWGT+WG+ GYI+MA
Sbjct: 273 SHSSFQMYQSGIYVEQECSPKQLDHAVLVVGYGTEQGQDYWLVKNSWGTTWGDEGYIKMA 332

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CGI  QASYP+
Sbjct: 333 RNMDNQ----CGIASQASYPL 349


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 176/317 (55%), Gaps = 46/317 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADL 113
           +   ++ +L++Y R Y S+ E +RR GI++ N   I   N       +S+ +  N F+D 
Sbjct: 63  LNSMWQAFLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAFSDK 122

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLGL----PASVDWRKEGAVTPVKDQGQCGSCWAF 169
           +N E +    G+       R  S QY+      PA VDWR +GAVTPVK+QG CGSCWAF
Sbjct: 123 TNSE-LDVLRGFRHSSKASRSGS-QYIPFDAAPPAEVDWRTKGAVTPVKNQGDCGSCWAF 180

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA   +EG + L TGKLVSLSEQ+LVDC  +S N GC+GG M+ AFE++ +  G+ TE  
Sbjct: 181 SATGGIEGQHYLATGKLVSLSEQQLVDC--SSSNDGCDGGLMDLAFEYVKEHKGIDTEVH 238

Query: 230 YPYRGKND----RCQTDKTKHHAVTITGYEAIP-----------------------ARYA 262
           YPY   N     +C  D  K+ AV +TGY  IP                          +
Sbjct: 239 YPYVSGNTGYARQCSFDP-KYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPS 297

Query: 263 FQLYSHGVF-DEYCG-HQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           F  Y  G++ D  C  H L+HGV VVGYG D+G  YWL+KNSWG  WGE GY+R+ RN  
Sbjct: 298 FMAYESGIYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENGYVRILRNHN 357

Query: 321 SSNIGICGILMQASYPV 337
           +    +CG+   ASYP+
Sbjct: 358 N----LCGVATMASYPL 370


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/348 (39%), Positives = 186/348 (53%), Gaps = 58/348 (16%)

Query: 30  LSLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYG-SEDEWQRRFGIYS 87
           LSLFL  + LGI + A       K+D QS++ ++  W   Y + Y  +E++W+R   ++ 
Sbjct: 3   LSLFLAALCLGIASAA------PKFD-QSLDAQWNQWRSTYKKVYAVNEEDWRR--AVWE 53

Query: 88  SNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPS 136
            N++ I+  N +       F +  N F D +NEEF     G+        K + EP +  
Sbjct: 54  KNMKMIERHNQEYSQGKHGFTMAMNAFGDKTNEEFRQLMNGFQSQKHKKGKLFYEPVFGH 113

Query: 137 VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
           +     P SVDW ++G VTPVKDQGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVD
Sbjct: 114 I-----PTSVDWTQKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVD 168

Query: 197 CDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEA 256
           C     N+GCNGG M+ AF+++   GG+ +E+ YPY   + +      K+ A   TG+  
Sbjct: 169 CSWREGNEGCNGGLMDNAFQYVKDNGGLDSEESYPYTATDTQDCRYNPKYSAANDTGFVD 228

Query: 257 IP----------------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYG---- 289
           IP                       + +FQ YS G+ FD  C   +NHGV  VGYG    
Sbjct: 229 IPPQEKALMKAVATVGPISVAIDAGQVSFQFYSSGIYFDPACRLTVNHGVLAVGYGFEGT 288

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +    KYWLVKNSWG SWG  GYI++A++  +     CGI   ASYP 
Sbjct: 289 DPDKNKYWLVKNSWGKSWGADGYIKIAKDRNNH----CGIARAASYPT 332


>gi|313118764|gb|ADR32294.1| C14 cysteine protease [Solanum stoloniferum]
          Length = 217

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 135/218 (61%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA 262
           NQGC+GG M+ AFEF+   GG+ +E+DYPY+ +N  C   +     V I  YE +P    
Sbjct: 61  NQGCDGGLMDYAFEFVINNGGIDSEEDYPYKERNGVCDQYRKNAKVVVIDSYEDVPVNNE 120

Query: 263 ----------------------FQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV   GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVAAGYGTENGLDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG  WGE GY+R+ RN  SS+ G+CG+ ++ SYPVK
Sbjct: 181 NSWGADWGEKGYLRVQRNVASSS-GLCGLAIEPSYPVK 217


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 22  YPEEILDTQWELWKKTYRKQYNSKGDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 80

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 81  NHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 140

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 141 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 198

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 199 GIDSEDAYPYVGQDENCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 257

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ Y  GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 258 LTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 317

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 318 NKNNA----CGIANLASFP 332


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 176/312 (56%), Gaps = 45/312 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSN----VQYIDYINSQNLSFKLTDNKFADL 113
           ++E++ ++  Q+S+ Y SE E + R  I+  N     ++    +   + FKL  NK+AD+
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENDHKVAKHSKLFSQGFVKFKLGLNKYADM 82

Query: 114 SNEEFISTYLGYNKPYNE----------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQC 163
            + EF+ST  G+NK  N            R+ S   + LP +VDWR +GAVT VKDQG C
Sbjct: 83  LHHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHC 142

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCW+FS   ++EG +  KTGKLVSLSEQ LVDC     N GCNGG M+ AF +I   GG
Sbjct: 143 GSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNTGCNGGLMDNAFRYIKDNGG 202

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYE----------------------AIPARY 261
           + TE  YPY  ++++C   KT++   T  G+                       AI A Y
Sbjct: 203 IDTEQSYPYLAEDEKCHY-KTQNSGATDKGFVDIEEGNEDDLKAAVATVGPVSIAIDASY 261

Query: 262 -AFQLYSHGVF-DEYCGHQ-LNHGVTVVGYG-EDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             FQLYS GV+ D  C  Q L+HGV VVGYG  D G+ YWLVKNSW  S G  GYI+MAR
Sbjct: 262 ETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMAR 321

Query: 318 NSPSSNIGICGI 329
           N  +    +CG+
Sbjct: 322 NQDN----MCGV 329


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|348565223|ref|XP_003468403.1| PREDICTED: cathepsin L1-like [Cavia porcellus]
          Length = 333

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 175/321 (54%), Gaps = 50/321 (15%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFA 111
           Q+++ +++ W   + R YG  +E  RR  ++  N++ I+  N +      SF L  N F 
Sbjct: 23  QTLDAQWDQWKAAHGRLYGLNEEGWRR-AVWEKNLRMIELHNGEYSQGRHSFTLGMNHFG 81

Query: 112 DLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           D++NEEF     G+        K Y EP       L LP SVDWR++G VT VK+QGQCG
Sbjct: 82  DMTNEEFRQVMNGFQHQKHKTGKMYQEPL-----LLQLPKSVDWREKGYVTEVKNQGQCG 136

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFSA  ++EG    KTG LVSLSEQ LVDC     NQGCNGG M+ AF+++    G+
Sbjct: 137 SCWAFSATGSLEGQMFHKTGNLVSLSEQNLVDCSRPQGNQGCNGGLMDFAFQYVKDNKGL 196

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YA 262
             E  YPY GK+  C+  K +  A   TG+  +P R                       +
Sbjct: 197 EAEKSYPYVGKDGECKY-KPELSAANDTGFVDVPQREKVVQKALATVGPLSVAIDAGLQS 255

Query: 263 FQLYSHGV-FDEYCGHQ-LNHGVTVVGYGEDHGE----KYWLVKNSWGTSWGEAGYIRMA 316
           FQ Y  G+ +D  C  + LNHGV +VGYG D  E     YWL+KNSWGT+WG  GY+++A
Sbjct: 256 FQFYKEGIYYDPGCSSRDLNHGVLLVGYGTDASETGKGDYWLIKNSWGTTWGADGYVKIA 315

Query: 317 RNSPSSNIGICGILMQASYPV 337
           RN  +     CG+   ASYP+
Sbjct: 316 RNRNNH----CGVATAASYPL 332


>gi|432114311|gb|ELK36239.1| Cathepsin S [Myotis davidii]
          Length = 340

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 181/335 (54%), Gaps = 38/335 (11%)

Query: 34  LLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
           + W+L +  G  S    Q +   +++  ++ W K Y ++Y  E+E   R  I+  N++Y+
Sbjct: 10  MKWLLLVLLGC-SSAMAQLHKDPTLDHHWDLWKKTYGKQYTEENEEVTRRFIWEKNLKYV 68

Query: 94  DYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASV 146
              N ++     S+ L  N  AD+++EE +        P    R   + S     LP S+
Sbjct: 69  MLHNLEHSMGMHSYDLGMNHLADMTSEEVMLLMSSLRVPSQWQRNVTFKSNPNQKLPDSM 128

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQG 205
           DWR +G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+G
Sbjct: 129 DWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSVQNLVDCSTGKYSNKG 188

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           CNGG+M +AF++I    G+ +E  YPY+  + +CQ D  K+ A T + Y  +P       
Sbjct: 189 CNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYD-VKNRAATCSKYVELPFGNEEAL 247

Query: 259 ----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                           +  +F LY  GV +D+ C   +NHGV  VGYG  +G+ YWLVKN
Sbjct: 248 KEAVANKGPVSVAIDASHPSFFLYRSGVYYDKACTLNVNHGVLAVGYGNYNGKDYWLVKN 307

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           SWG  +GE GYIRMARNS +     CGI    SYP
Sbjct: 308 SWGLHFGEQGYIRMARNSGNH----CGIASYPSYP 338


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 184/338 (54%), Gaps = 44/338 (13%)

Query: 35  LWVLGIPAGAWSEGYPQKYDPQSM-EERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQY 92
           +W   I            + P+ M + +++ W + Y +EY S+ DE  RR  I+  N++Y
Sbjct: 1   MWEFSILLLLLPSVVSSAHHPEEMLDTQWKLWKQSYGKEYNSKVDEISRRL-IWEKNLKY 59

Query: 93  IDYIN---SQNL-SFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LP 143
           I   N   S  L +F+L  N   D+++EE +    G   P +  +     Y+       P
Sbjct: 60  ISTHNLEFSLGLHTFELAMNHLGDMTSEEVVQKMTGLKMPLSRSQNNDTLYIPDWEGRTP 119

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
            SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   S+N
Sbjct: 120 ESVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SKN 177

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----- 258
            GC GGYM  AF+++ +  G+ +ED YPY G+++ C  + T   A    GY  IP     
Sbjct: 178 DGCGGGYMTNAFQYVQENRGIDSEDAYPYIGQDESCMYNPTG-KAAKCRGYREIPEGSEK 236

Query: 259 ------ARY------------AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWL 298
                 AR             +FQ YS GV +DE C G  LNH V  VGYG   G K+W+
Sbjct: 237 ALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNGDNLNHAVLAVGYGIQRGTKHWI 296

Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           +KNSWG  WG  GYI MARN  ++    CGI   AS+P
Sbjct: 297 IKNSWGEEWGNKGYILMARNKKNA----CGIANLASFP 330


>gi|301789679|ref|XP_002930256.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281343339|gb|EFB18923.1| hypothetical protein PANDA_020645 [Ailuropoda melanoleuca]
          Length = 334

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/343 (39%), Positives = 187/343 (54%), Gaps = 49/343 (14%)

Query: 31  SLFL-LWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           SLFL +  LGI + A       K D QS+ E++  W   + R YG  +E  RR  ++  N
Sbjct: 4   SLFLSVLCLGIASAA------PKLD-QSLTEQWYQWKATHRRLYGMNEEGWRR-AVWEKN 55

Query: 90  VQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGY--NKPYNEPRWPSVQYLGLP 143
           ++ ID  N +       F +  N F D++NEEF     G+   KP     +    +  +P
Sbjct: 56  MKMIDLHNREYSQGQHGFTMAMNAFGDMTNEEFRQVMNGFRNQKPRKGKVFQEPLFAEIP 115

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
            SVDW  +G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC  +  N
Sbjct: 116 KSVDWTLKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRSQGN 175

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTKHHAVTITGYEAIPAR-- 260
           +GCNGG M+ AF+++ + GG+ +E+ YPY G + D C+  K +  A   TG+  IP R  
Sbjct: 176 EGCNGGLMDNAFQYVKENGGLDSEESYPYLGTDTDSCKY-KPECSAANDTGFVDIPQREK 234

Query: 261 --------------------YAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG----EDHGE 294
                                +FQ Y  G+ +D  C  + L+HGV VVGYG    + +  
Sbjct: 235 ALMKAVATVGPISVAIDAGHQSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNN 294

Query: 295 KYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           K+W+VKNSWG  WG  GY++MA++  +     CGI   ASYP 
Sbjct: 295 KFWIVKNSWGPEWGTNGYVKMAKDQNNH----CGIATAASYPT 333


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/310 (40%), Positives = 167/310 (53%), Gaps = 36/310 (11%)

Query: 59  EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEF 118
           +  ++ W   + +EY +++E   R  I+ +N++ I   N    SFKL  N   D+++ E 
Sbjct: 26  DPNWKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNEGKHSFKLAMNHLGDMTSLEI 85

Query: 119 ISTYLGYNKPYNEPRWPSVQYLGLPA------SVDWRKEGAVTPVKDQGQCGSCWAFSAV 172
             T LG     +    P       PA      S+DWR +G VTPVK+QGQCGSCWAFS  
Sbjct: 86  SQTLLGLKLKKHAESQPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAFSTT 145

Query: 173 AAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPY 232
            A+EG +  KTGKLVSLSEQ LVDC     N GC GG M+ AF++I + GG+ TE  YPY
Sbjct: 146 GALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSYPY 205

Query: 233 RGKNDRCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHG 269
             K+  C  +K+   A   TG+  IP                       ++  F  Y  G
Sbjct: 206 LAKDGVCHYNKSAIGAKD-TGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQG 264

Query: 270 VFD--EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGIC 327
           V+D  +    +L+HGV  VGYG D G+ YWLVKNSWG SWGE GYI++ARN        C
Sbjct: 265 VYDDPDCSSTRLDHGVLAVGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARNDHDK----C 320

Query: 328 GILMQASYPV 337
           G+  +ASYP+
Sbjct: 321 GVASKASYPL 330


>gi|5381317|gb|AAD42940.1|AF091366_1 cryptopain precursor [Cryptosporidium parvum]
          Length = 401

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 195/374 (52%), Gaps = 49/374 (13%)

Query: 11  TNLHLKIAIDMRMMLRNAVLSLFLLWVLGIP-------AGAWSEGYPQKY-DPQSMEER- 61
           TN   +    ++ ++   ++++F++ V+ +        +    +  P  Y DP + E R 
Sbjct: 25  TNQQREPNKKLKNIIIATLIAIFIVLVVTVSLYITNNTSDKIDDFVPGDYVDPATREYRK 84

Query: 62  -FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
            FE + K+Y + Y S +E  +RF IY  N+ +I   NSQ  S+ L  N+F DLS EEF++
Sbjct: 85  SFEEFKKKYHKVYSSMEEENQRFEIYKQNMNFIKTTNSQGFSYVLEMNEFGDLSKEEFMA 144

Query: 121 TYLGYNKPYNEPRW----------PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            + GY K   +              S +    P S++W + G V P+++Q  CGSCWAFS
Sbjct: 145 RFTGYIKDSKDDERVFKSSRVSASESEEEFVPPNSINWVEAGCVNPIRNQKNCGSCWAFS 204

Query: 171 AVAAVEGINKLKTGK-LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           AVAA+EG    +T + L SLSEQ+ VDC   + N GC+GG M  AF++  K   + T DD
Sbjct: 205 AVAALEGATCAQTNRGLPSLSEQQFVDCSKQNGNFGCDGGTMGLAFQYAIKNKYLCTNDD 264

Query: 230 YPYRGKNDRCQTDKTKHH-AVTITGYEAIPAR-----------------------YAFQL 265
           YPY  +   C     +++  + +  Y+ +  R                         FQ 
Sbjct: 265 YPYFAEEKTCMDSFCENYIEIPVKAYKYVFPRNINALKTALAKYGPISVAIQADQTPFQF 324

Query: 266 YSHGVFDEYCGHQLNHGVTVVGY--GEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSN 323
           Y  GVFD  CG ++NHGV +V Y   ED  ++YWLV+NSWG +WGE GYI++A +S    
Sbjct: 325 YKSGVFDAPCGTKVNHGVVLVEYDMDEDTNKEYWLVRNSWGEAWGEKGYIKLALHSGKK- 383

Query: 324 IGICGILMQASYPV 337
            G CGIL++  YPV
Sbjct: 384 -GTCGILVEPVYPV 396


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 176/319 (55%), Gaps = 48/319 (15%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL-------SFKLTDNK 109
           S++  +  +  +++++Y    E   R G++   ++ ++YI   NL       SF++  N+
Sbjct: 17  SLDREWGMFKVRHNKQYKDNQEEAYRKGVF---MKAVEYIQQHNLEADRGVHSFRVGINE 73

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSVQYL------GLPASVDWRKEGAVTPVKDQGQC 163
           +AD+ NEEF+    GY      P+ P+  Y+       LPA+VDWR +G VT VK+QGQC
Sbjct: 74  YADMPNEEFVRVMNGYKMQEQRPKAPT--YMPPSNVGDLPATVDWRTKGYVTEVKNQGQC 131

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS+  ++EG    K  KL+SLSEQ LVDC     N GC GG M++AF +I    G
Sbjct: 132 GSCWAFSSTGSLEGQTFKKYNKLISLSEQNLVDCSTEQGNMGCGGGLMDQAFTYIKVNDG 191

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------- 260
           + TE  YPY   + +C+ +K    A   TGY  I ++                       
Sbjct: 192 IDTETSYPYEAASGKCRFNKANVGA-NDTGYTDIKSKSESDLQSAVATVGPIAVAIDASH 250

Query: 261 YAFQLYSHGVFDE-YCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
            +FQLY  GV+   +C   +L+HGV  VGYG D G+ YWLVKNSWG +WG+ GYI M+RN
Sbjct: 251 MSFQLYKSGVYHYIFCSQTRLDHGVLAVGYGTDSGKDYWLVKNSWGATWGQQGYIMMSRN 310

Query: 319 SPSSNIGICGILMQASYPV 337
             ++    CGI  QASYP 
Sbjct: 311 RDNN----CGIATQASYPT 325


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 17  YPEEILDTQWELWKKTYRKQYNSKGDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQDENCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ Y  GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/304 (42%), Positives = 170/304 (55%), Gaps = 39/304 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY S+ E + R  IY  N   +   N        S+++  NKF DL + EF S   G
Sbjct: 38  HKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 125 Y-NKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           Y +K  N  R  S         + +P SVDWR++GA+TPVKDQGQCGSCWAFS+  A+EG
Sbjct: 98  YQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEG 157

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
               KTGKLVSLSEQ L+DC     N+GCNGG M++AF++I    G+ TE+ YPY  ++ 
Sbjct: 158 QTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDG 217

Query: 238 RC--------------------QTDKTKHHAVTITGYE-AIPARY-AFQLYSHGVFDE-Y 274
            C                    + DK K    T+     AI A + +FQ YS G + E  
Sbjct: 218 VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGXYYEPS 277

Query: 275 C-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV VVGYG D+GE YWLVKNSW   WG+ GYI++ARN  +     CG+   A
Sbjct: 278 CDSDDLDHGVLVVGYGSDNGEDYWLVKNSWSEHWGDEGYIKIARNRKNH----CGVATAA 333

Query: 334 SYPV 337
           SYP+
Sbjct: 334 SYPL 337


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 26  YPEEILDTQWELWKKTYRKQYNSKGDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 84

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 85  NHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQ 144

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 145 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 202

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 203 GIDSEDAYPYVGQDENCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 261

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ Y  GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 262 LTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 321

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 322 NKNNA----CGIANLASFP 336


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/304 (42%), Positives = 171/304 (56%), Gaps = 39/304 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY S+ E + R  IY  N   +   N        S+++  NKF DL + EF S   G
Sbjct: 38  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 125 Y-NKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           Y +K  N  R  S         + +P SVDWR +GA+TPVKDQGQCGSCWAFS+  A+EG
Sbjct: 98  YQHKKQNSSRAESTFTFMEPANVEVPESVDWRVKGAITPVKDQGQCGSCWAFSSTGALEG 157

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
               KTGKL+SLSEQ L+DC     N+GCNGG M++AF++I    G+ TE+ YPY  +++
Sbjct: 158 QTFRKTGKLISLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDN 217

Query: 238 RC--------------------QTDKTKHHAVTITGYE-AIPARY-AFQLYSHGVFDE-Y 274
            C                    + DK K    T+     AI A + +FQ YS GV+ E  
Sbjct: 218 VCRYNPRNRGAIDRGFVHIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPS 277

Query: 275 C-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV VVGYG D+G+ YWLVKNSW   WG+ GYI++ARN  +     CGI   A
Sbjct: 278 CDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKIARNRKNH----CGIATAA 333

Query: 334 SYPV 337
           SYP+
Sbjct: 334 SYPL 337


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 175/316 (55%), Gaps = 43/316 (13%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADL 113
            +E ++ W  ++ + Y S++E   R  I+  N+  +   N +    + ++ L  N+FADL
Sbjct: 24  FDEDWKEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGHFTYDLGMNQFADL 83

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYL------GLPASVDWRKEGAVTPVKDQGQCGSCW 167
            N+EF++   G+             +L       LP +VDWR +G VTPVKDQGQCGSCW
Sbjct: 84  QNKEFVAMMTGFRVNGTSKAAKGSTFLPPNNVGKLPKTVDWRTKGYVTPVKDQGQCGSCW 143

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFSA  ++EG +  KTGKLVSLSEQ LVDC  + +N GCNGG M++AF++I   GG+ TE
Sbjct: 144 AFSATGSLEGQHFKKTGKLVSLSEQNLVDC--SDKNYGCNGGLMDRAFQYIIDAGGIDTE 201

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQ 264
           + YPY   +  C   KT +   T+TGY  +                        + ++FQ
Sbjct: 202 ESYPYIAMDGNCHF-KTANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHFSFQ 260

Query: 265 LYSHGVFDEY-CGHQ-LNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           LY  GV++E  C    L+HGV  VGYG    G  YW+VKNSW  +WG  GYI M+RN  +
Sbjct: 261 LYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDYWIVKNSWAETWGMNGYIWMSRNKDN 320

Query: 322 SNIGICGILMQASYPV 337
                CGI  QASYP+
Sbjct: 321 Q----CGIATQASYPL 332


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|294885991|ref|XP_002771503.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
 gi|239875207|gb|EER03319.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
          Length = 337

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 178/322 (55%), Gaps = 41/322 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D ++    F  + K++ + Y ++DE  +R  I+  N+ YI+ +N+QNLS+KL  N++ DL
Sbjct: 19  DLETSSLAFIGFQKKHGKSYDNKDEEMKRAAIFHDNLNYIEEVNAQNLSYKLGVNEYTDL 78

Query: 114 SNEEFISTYL-------GYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           + EEF +  L       G    +     P+   L  P SVDWRK+G + PVKDQG CGSC
Sbjct: 79  TLEEFAALKLSSTDMSEGMGDGFVAGAGPTTTTL--PTSVDWRKKGVLNPVKDQGYCGSC 136

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA+ A+E    + TGKL+SLSEQ+LVDC     N+GCNGG M+KAFE+I K  GV  
Sbjct: 137 WAFSAIGALEPRYAIATGKLLSLSEQQLVDCAGAYGNEGCNGGLMDKAFEYI-KATGVDK 195

Query: 227 EDDYPYRGKNDRCQ------TDKTKHHAVT------------ITGYEAIP---ARYA--- 262
           E  YPY G ++ CQ      TD      VT            + G  A P   A YA   
Sbjct: 196 ESTYPYVGSDETCQATVENKTDGLPVGEVTGNQMLHQTEKALMEGVAAAPVSIAMYANLQ 255

Query: 263 -FQLYSHGVF-DEYC---GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
            FQ Y  GV+ D  C   G  ++HGV  VGYG ++G+ Y++++NSWG SWG+ GY+ + R
Sbjct: 256 SFQHYKSGVYSDPNCNAKGGSIDHGVVAVGYGTENGQDYFIIRNSWGRSWGQDGYVYLKR 315

Query: 318 NSPSSNIGICGILMQASYPVKR 339
              S   G C I      P  +
Sbjct: 316 GVGS--FGQCNIYKYMCVPTLK 335


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 185/336 (55%), Gaps = 41/336 (12%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           +L+W L + + A +  +    DP +++  ++ W K Y ++Y  ++E   R  I+  N++ 
Sbjct: 3   WLVWALLLCSSAMAHVH---RDP-TLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKT 58

Query: 93  IDYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPAS 145
           +   N ++     S++L  N   D+++EE IS       P   PR   + S     LP S
Sbjct: 59  VTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPNQKLPDS 118

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQ 204
           +DWR++G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+
Sbjct: 119 MDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNK 178

Query: 205 GCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------ 258
           GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D  K+ A T + Y  +P      
Sbjct: 179 GCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYD-VKNRAATCSRYIELPFGSEEA 237

Query: 259 -----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                            +  +F LY  GV +D  C   +NHGV VVGYG   G+ YWLVK
Sbjct: 238 LKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVK 297

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           NSWG  +G+ GYIRMARNS +     CGI    SYP
Sbjct: 298 NSWGLHFGDQGYIRMARNSGNH----CGIANYPSYP 329


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRTPDSVDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDENCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ Y  GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 254 LTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|227018328|gb|ACP18830.1| cysteine proteinase 1 [Chrysomela tremula]
          Length = 323

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 45/318 (14%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNK 109
           +  S +E + ++ K + + Y S  E + RF I+   ++ I   N++      ++ L  N+
Sbjct: 15  NAASDQELWADFKKAHGKTYKSLREEKLRFNIFQDTLREIAAHNAKYESGESTYYLAINQ 74

Query: 110 FADLSNEEFISTYLGYNKPYNEPRWPSVQYLGL--------PASVDWRKEGAVTPVKDQG 161
           F+D+++EEF +  +      N    PS++ + +        P S+DWR EGAV P+++Q 
Sbjct: 75  FSDITDEEFRAMLM-----KNVESRPSLEDMEIANLTVGAAPESIDWRTEGAVLPIRNQE 129

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
            CGSCWAFSAVAAVEG   +K+G    LS Q+LVDC     N GCNGG M  AF++I K 
Sbjct: 130 DCGSCWAFSAVAAVEGQAAIKSGSKTPLSVQQLVDCSTEGGNSGCNGGLMNGAFDYI-KA 188

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA------------------- 262
            G+ ++  YPY G +D C+ DK+    V +TGY+ + +  A                   
Sbjct: 189 NGLESDAKYPYTGTDDSCKADKSS-SLVKLTGYKKVASSEASLKEAVGTVGPISVAVYAD 247

Query: 263 -FQLYSHGVFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNS 319
            ++ Y  G+F+     G  L+HGVT VGYG D+G+KYW VKNSWG SWGE GYIRMAR++
Sbjct: 248 LWRSYGGGIFNNILCLGFGLDHGVTAVGYGTDNGKKYWPVKNSWGESWGEEGYIRMARDT 307

Query: 320 PSSNIGICGILMQASYPV 337
             +    CGI  QASYP+
Sbjct: 308 LHN----CGINQQASYPI 321


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 2   YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 60

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 61  NHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQ 120

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 121 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 178

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 179 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 237

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 238 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 297

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 298 NKNNA----CGIANLASFP 312


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 179/319 (56%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y ++ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTQWELWKKTYGKQYNNKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPPSHSRSNDSLYIPDWESRAPDSIDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY  IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDESCMYNPTG-KAAKCKGYREIPEGNEKALKRAVARVGPISVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 254 LTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKHWIIKNSWGENWGNKGYILMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|357130490|ref|XP_003566881.1| PREDICTED: actinidain-like [Brachypodium distachyon]
          Length = 350

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 170/305 (55%), Gaps = 37/305 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN-SQNLSFKLTDNKFADLSN 115
           ++  R E W+ ++ R Y   +E  RR  ++ +N +Y+D +N + N ++ L  N+F+DL++
Sbjct: 35  TVAARHEQWMAKFGRVYTDANEKARRQAVFGANARYVDAVNRAGNRTYTLGLNEFSDLTD 94

Query: 116 EEFISTYLGYNKPYNEPRW------PSVQYLG-LPASVDWRKEGAVTPVKDQGQCGSCWA 168
            EF  T+LGY +   E         P     G +P S DWR +GAVT VK QG CG CWA
Sbjct: 95  NEFAKTHLGYREFRPETANISKGVDPGYGLAGNIPKSFDWRTKGAVTEVKSQGGCGCCWA 154

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           F+AVAA EG+ K+  G L+S+SEQ+++DC   + N  C GGYM  A  ++   GG+ TE+
Sbjct: 155 FAAVAATEGLVKIAKGTLISMSEQQVLDC--TTGNNTCKGGYMNDALSYVFASGGLQTEE 212

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP------------ARYA-----------FQL 265
           DY Y  +   C+ D T + A ++   E +P            AR             F+ 
Sbjct: 213 DYEYNAEKGACRRDVTPNPATSVGHAEYMPLDGNEFLLQKLVARQPVVVAVEAYGTDFKN 272

Query: 266 YSHGVF--DEYCGHQLNHGVTVVGYGEDHGEK--YWLVKNSWGTSWGEAGYIRMARNSPS 321
           Y  GVF     CG  L+H  TVVGYG   G K  YWLVKN WGTSWGE+GY+R+AR S +
Sbjct: 273 YGGGVFTGSPSCGQNLDHFFTVVGYGFADGGKQMYWLVKNQWGTSWGESGYMRIARGSSA 332

Query: 322 SNIGI 326
            N G+
Sbjct: 333 RNCGM 337


>gi|261289787|ref|XP_002611755.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
 gi|229297127|gb|EEN67765.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
          Length = 327

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 178/317 (56%), Gaps = 41/317 (12%)

Query: 57  SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFAD 112
           +++ ++E +   + ++Y SE E   R+ I+  N + +   N +      +F +  NKF D
Sbjct: 15  AIDPQWEAFKLLHGKQY-SEYEDGARYAIFQENSRIVKQHNEEAAMGKHTFFMRMNKFGD 73

Query: 113 LSNEEFISTYLGYNKPYNEPR-------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGS 165
           ++NEEF    +G    Y+          + S+  L +  +VDWR++GAVT VK+Q QCGS
Sbjct: 74  MTNEEFQMLVIGSGLLYSNKTQQTEGGVFESLPGLKVNDTVDWRQKGAVTKVKNQEQCGS 133

Query: 166 CWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVT 225
           CWAFS   ++EG + LK+G LVSLSEQ LVDC     N+GC GG M++AF++I   GG+ 
Sbjct: 134 CWAFSTTGSLEGQHFLKSGTLVSLSEQNLVDCSRKEGNKGCQGGLMDQAFKYIKTNGGID 193

Query: 226 TEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYA 262
           TE+ YPY+GKN+R    K+     T++ Y  I                        +  +
Sbjct: 194 TEECYPYKGKNERKCEYKSSCSGATLSSYVDIKTGDEDALMQASATIGPISVGIDASHPS 253

Query: 263 FQLYSHGVFDEY--CGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           FQLY HGV+ E      +L+HGV VVGYG D  + YWLVKNSWG  WG  GYI+M+RN  
Sbjct: 254 FQLYDHGVYHEKRCSSKKLDHGVLVVGYGTDGEKDYWLVKNSWGEEWGMEGYIKMSRNKD 313

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI  QASYPV
Sbjct: 314 NQ----CGIATQASYPV 326


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  
Sbjct: 18  YPEEILDTHWELWKKSYGKQYDSKVDETSRRL-IWEKNLKHISIHNLEAALGVHTYELAM 76

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 77  NHLGDMTSEEVVQKMTGLKVPPSRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 136

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 194

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+++ C  + T   A    GY+ IP           AR           
Sbjct: 195 GIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDAS 253

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ Y  GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GY+ MAR
Sbjct: 254 LTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWGNKGYVLMAR 313

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 314 NKNNA----CGIANLASFP 328


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 191/343 (55%), Gaps = 50/343 (14%)

Query: 31  SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDE-WQRRFGIYSS 88
           SLFL  + LGI + A     PQ    QS++E +  W   + + YG ++E W+R   ++  
Sbjct: 4   SLFLAALCLGIASAA-----PQLN--QSLDELWSQWKATHGKLYGMDEEGWRRE--VWKK 54

Query: 89  NVQYIDYINSQNL----SFKLTDNKFADLSNEEF--ISTYLGYNKPYNEPRWPSVQYLGL 142
           N++ I   N ++     SF +  N F D++NEEF  +   L   K      + +  +  +
Sbjct: 55  NMKMIRQHNWEHSQGKHSFTVAMNGFGDMTNEEFKQVMNGLQMQKHKKGKMFQAPLFAKI 114

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P+SVDWR++G VTPVKDQG CGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC     
Sbjct: 115 PSSVDWREKGYVTPVKDQGPCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSQAEG 174

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           N+GCNGG M  AF+++   GG+ +E+ YPY  +++ C+  K +  A   TG+  IP    
Sbjct: 175 NEGCNGGLMNNAFQYVKDNGGLDSEESYPYHAQDESCKY-KPQDSAANDTGFFDIPQQEK 233

Query: 259 ------------------ARYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYGEDHGEK--- 295
                             + + FQ Y  G+ +D  C  + L+HGV V+GYG + G+    
Sbjct: 234 ALMVAVATKGPISVGIDASHFTFQFYHEGIYYDPDCSSEDLDHGVLVIGYGTEIGQSINK 293

Query: 296 -YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
            YW+VKNSWG +WG  GYI+MA++  +     CGI   AS+PV
Sbjct: 294 TYWIVKNSWGANWGIDGYIKMAKDRKNH----CGIATMASFPV 332


>gi|403367386|gb|EJY83513.1| Cathepsin L [Oxytricha trifallax]
          Length = 339

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 195/343 (56%), Gaps = 37/343 (10%)

Query: 25  LRNAVLSLFLL-WVLGIPAGAWSEGYPQKYDPQSMEER-----FENWLKQYSREYGSEDE 78
           +R++V++L ++  V  I   A SE  P      +ME       F N+L +Y + YG+++E
Sbjct: 1   MRSSVITLAVVGTVAAIAVVALSE-MPSSTSLYTMEVTQENVDFANYLAKYGKSYGTKEE 59

Query: 79  WQRRFGIYSSNVQYIDYINSQNL-SFKLTDNKFADLSNEEFISTYLGYNK-PYNEPRWPS 136
           +Q RF  Y  N+  I + NS N  +F L  NKFAD +  E+    LGY + P    ++  
Sbjct: 60  FQFRFQQYQQNMALIAHHNSNNENTFTLASNKFADYTPAEY-KKLLGYKRMPKANAQYAE 118

Query: 137 VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVD 196
                +P S+DWR +GAVTPVKDQGQCGSCWAFS   ++EG + + TG L S SEQ+LVD
Sbjct: 119 FDLTAVPDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGRDAIATGTLQSYSEQQLVD 178

Query: 197 CDVNSE-NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC--QTDK--TKHHAVTI 251
           CD +++ NQGCNGG M  A ++  K   +  E DYPY+  + +C  + DK  +K+   T 
Sbjct: 179 CDYSTDGNQGCNGGDMGLAMDYSAK-NPLELESDYPYKAIDGKCSYKADKGHSKNKGHTN 237

Query: 252 TGYEAIPARYA-----------------FQLYSHGVFD-EYCGHQLNHGVTVVGYGEDHG 293
               ++P   A                 FQ Y+ G+ + + CG  L+HGV  VGYG ++ 
Sbjct: 238 VKQNSLPDLKAAIAQGPVSVAIEADTMVFQFYNGGILNSKSCGTNLDHGVLAVGYGSENN 297

Query: 294 EKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           + Y++VKNSWG SWGE GY+R+A+       GICGI M+  +P
Sbjct: 298 KPYYIVKNSWGPSWGEQGYLRIAQ---VDGAGICGIQMEPVFP 337


>gi|157829826|pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+
          Length = 218

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 132/219 (60%), Gaps = 24/219 (10%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC    
Sbjct: 1   LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQ 60

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
             +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D      VTI  YE +P   
Sbjct: 61  NTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNN 120

Query: 259 -------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                              A  AF+ YS G+F   CG  ++H VT+VGYG + G  YW+V
Sbjct: 121 EWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIV 180

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           KNSW T+WGE GY+R+ RN   +  G CGI    SYPVK
Sbjct: 181 KNSWDTTWGEEGYMRILRNVGGA--GTCGIATMPSYPVK 217


>gi|330801846|ref|XP_003288934.1| hypothetical protein DICPUDRAFT_153222 [Dictyostelium purpureum]
 gi|325081026|gb|EGC34558.1| hypothetical protein DICPUDRAFT_153222 [Dictyostelium purpureum]
          Length = 334

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 183/338 (54%), Gaps = 45/338 (13%)

Query: 29  VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           VLSL  L +  I +        + + P   +  F  W+K + + Y S DE+ R++  +  
Sbjct: 8   VLSLLFLSINIIAS-------SRVFTPNQYQSSFVQWMKSHGKAY-SHDEFARKYRTFQD 59

Query: 89  NVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYN---KPYNEPRWPSVQYLGLPAS 145
           N+ Y+   NS+N    L  N FAD++N E+ +T LG +   +P+  PR  +   + LP S
Sbjct: 60  NMDYVHQWNSKNSETVLGLNNFADMNNVEYRNTLLGASIEVEPFRTPR--TFSRIQLPTS 117

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR++GAV  +KDQG CGSC++FSA+ A E    +  G++++LSEQ ++DC  +  N+G
Sbjct: 118 VDWREKGAVHDIKDQGHCGSCYSFSAIGAAESAYYIANGEMLTLSEQNILDCSRSYGNEG 177

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK-------------------- 245
           CNGGYM ++F+F+   GG  +E  YPY  K+  C+ D  K                    
Sbjct: 178 CNGGYMLESFQFLLDQGGAVSEASYPYEAKDASCRFDSVKTPIVATFNGTVEIRRGDEGD 237

Query: 246 -HHAVTITGYEAI---PARYAFQLYSHGVFDE-YC-GHQLNHGVTVVGYGEDH--GEKYW 297
              A+   G  A+       +FQLY  GV+ E YC  + L+H V  VGY  D   G+ YW
Sbjct: 238 LQQAIATHGPVAVAIDAGHISFQLYKTGVYYEPYCSSYSLSHAVLAVGYDTDSVTGKDYW 297

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
           +V NSWG  WG++G+I+MARN  +     CGI   +SY
Sbjct: 298 IVANSWGLKWGDSGFIKMARNRGNH----CGISTMSSY 331


>gi|403300975|ref|XP_003941187.1| PREDICTED: cathepsin L1-like isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403300977|ref|XP_003941188.1| PREDICTED: cathepsin L1-like isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403300979|ref|XP_003941189.1| PREDICTED: cathepsin L1-like isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 333

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 175/317 (55%), Gaps = 42/317 (13%)

Query: 56  QSMEERFENWLKQYSREYG-SEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKF 110
            S+E ++  W   ++R YG +E+EW+R   ++  N++ I+  N +      SF +  N F
Sbjct: 23  HSLEAQWIKWKAMHNRLYGKNEEEWRR--AVWEKNMKTIELHNHEYNQGKHSFTMAMNTF 80

Query: 111 ADLSNEEFISTYLGYN--KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            D++NEEF     G+   KP N   +        P SVDWR++G VTPVK+QGQCGSCWA
Sbjct: 81  GDMTNEEFRQVMNGFQNRKPRNGKVFQEPLLHEAPRSVDWREKGYVTPVKNQGQCGSCWA 140

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  A+EG    KTGKLVSLSEQ LVDC     NQGCNGG M+ AF+++ + GG+ +E+
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNQGCNGGLMDYAFQYVQENGGLDSEE 200

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
            YPY    + C+ +  K+     TG+  IP                         +FQ Y
Sbjct: 201 SYPYEATEESCKYN-PKYSVANDTGFVDIPKLEKALMKAVATVGPISVAIDAGHESFQFY 259

Query: 267 SHGV-FDEYCGHQ-LNHGVTVVGYGEDH----GEKYWLVKNSWGTSWGEAGYIRMARNSP 320
             G+ F+  C  + ++HGV VVGYG +       KYWLVKNSWG  WG  GYI+MA++  
Sbjct: 260 KEGIYFEPECSSEDMDHGVLVVGYGFERTGSDNSKYWLVKNSWGEEWGMDGYIKMAKDRK 319

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI   ASYP 
Sbjct: 320 NH----CGIASAASYPT 332


>gi|350583407|ref|XP_003481511.1| PREDICTED: cathepsin S [Sus scrofa]
          Length = 331

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 186/335 (55%), Gaps = 41/335 (12%)

Query: 34  LLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
           L+WVL + + A ++ +    DP +++  ++ W K Y ++Y  ++E   R  I+  N++ +
Sbjct: 4   LVWVLLLCSSAMAQLHR---DP-TLDRHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTV 59

Query: 94  DYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASV 146
              N ++     S+ L  N   D+++EE IS       P   PR   + S     LP S+
Sbjct: 60  MLHNLEHSMGMHSYDLGMNHLGDMTSEEVISLMSCVRVPSQWPRNVTYKSNPNQKLPDSM 119

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQG 205
           DWR++G VT VK QG CGSCWAFSAV A+E   K+KTG+LVSLS Q LVDC      N+G
Sbjct: 120 DWREKGCVTEVKYQGSCGSCWAFSAVGALEAQVKMKTGRLVSLSAQNLVDCSTEKYRNKG 179

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           CNGG+M +AF++I    G+ +E  YPY+  + +C+ D +K+ A T + Y  +P       
Sbjct: 180 CNGGFMTEAFQYIIDNNGIDSEASYPYKAVDGKCKYD-SKNRAATCSRYTELPFADEYAL 238

Query: 259 ----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                              +F  Y  GV +D  C   +NHGV VVGYG  +G+ YWLVKN
Sbjct: 239 KEAVANKGPVSVAIDAKHSSFFFYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKN 298

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           SWG ++G+ GYIRMARNS +     CGI    SYP
Sbjct: 299 SWGLNFGDGGYIRMARNSENH----CGIANYPSYP 329


>gi|384941728|gb|AFI34469.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 186/349 (53%), Gaps = 59/349 (16%)

Query: 30  LSLFLL-WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           LSL L  + LGI +         K+D Q+++ ++  W   + R YG+ +E  RR  ++  
Sbjct: 3   LSLVLAAFCLGIASAV------PKFD-QNLDTKWYQWKATHRRLYGASEEGWRR-AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTY-------LGYNKPYNEPRWPSV 137
           N++ I+  N +       F +  N F D++NEEF           L   K + EP     
Sbjct: 55  NMKMIELHNGEYSQGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPL---- 110

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
            +L LP SVDWRK+G VTPVK+Q QCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC
Sbjct: 111 -FLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                NQGCNGG+M  AF ++ + GG+ +E+ YPY   +  C+  ++++     TG+E +
Sbjct: 170 SRPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKY-RSENSVANDTGFEVV 228

Query: 258 PA-----------------------RYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG--- 289
           PA                         +FQ Y  G+ F+  C  + L+HGV VVGYG   
Sbjct: 229 PAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEG 288

Query: 290 -EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
                 KYWLVKNSWG  WG  GY+++A++  +     CGI   ASYP 
Sbjct: 289 ANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNH----CGIATAASYPT 333


>gi|28932704|gb|AAO60046.1| midgut cysteine proteinase 3 [Rhipicephalus appendiculatus]
          Length = 334

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/306 (45%), Positives = 171/306 (55%), Gaps = 43/306 (14%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYI-----DYINSQNLSFKLTDNKFADLSNEEFISTYL 123
           + +EY S+ E   R  IY  N   I      Y  SQ +S+KL  N+F DL + EF+ST  
Sbjct: 34  HGKEYDSDTEEYYRLKIYMENRLKIARHNEKYAKSQ-VSYKLAMNEFGDLLHHEFVSTRN 92

Query: 124 GYNKPYNE-PRWPSV-------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           G+ + Y + PR  S        + L LP +VDWRK+GAVTPVK+QGQCGSCWAFS   ++
Sbjct: 93  GFKRNYRDTPREGSFFIEPEGFEDLHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSL 152

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  K  KLVSLSEQ LVDC     N GC GG M+ AF++I    G+ TE  YPY   
Sbjct: 153 EGQHFRKMRKLVSLSEQNLVDCMQKLGNNGCGGGLMDNAFKYIKANKGIDTELSYPYNAT 212

Query: 236 NDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSHGVFD- 272
           +  C   K+   A T TG+E IPAR                       +FQ YS GV D 
Sbjct: 213 DGVCHFKKSGVGA-TATGFEDIPARDENSWDAVAPVGPVSVAIDASHESFQFYSEGVLDE 271

Query: 273 -EYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
            E    QL+HGV VVGYG   G+ YWLVKNSWGT+WG+ GYI M RN  +     CGI  
Sbjct: 272 PECSSDQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQ----CGIAS 327

Query: 332 QASYPV 337
            ASYP+
Sbjct: 328 SASYPL 333


>gi|391338876|ref|XP_003743781.1| PREDICTED: cathepsin L-like isoform 4 [Metaseiulus occidentalis]
          Length = 336

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 185/341 (54%), Gaps = 42/341 (12%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           LS+  L +L +  GA S     +   Q  +  ++N+   ++++Y        R  I+  N
Sbjct: 4   LSMKFL-ILAVLVGAASAALTLE---QLFDAEWQNFKVHHNKKYEGSTVEAFRKKIFLQN 59

Query: 90  VQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRWPSVQYLGL 142
              I   N ++     ++KL  N+F D+ + EF+ST  G    N+ Y    W   + + L
Sbjct: 60  THLIARHNIKHAKGETTYKLKMNQFGDMLHHEFVSTMNGLLRSNRTYFGSTWIEPESVSL 119

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR++GAVTPVK+QG CGSCW+FS   A+EG    KTG+LVSLSEQ L+DC  +  
Sbjct: 120 PKSVDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYG 179

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---- 258
           N GC GG M+ AF +I +  G+ TE+ YPY GK  +C+  K +  A   TG+  IP    
Sbjct: 180 NNGCGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHK-EDSAGRDTGFVDIPSGNE 238

Query: 259 -------------------ARYAFQLYSHGVFD--EYCGHQLNHGVTVVGYG-EDHGEKY 296
                              +  +FQ Y  GV++  +   H L+HGV  VGYG  D G+ Y
Sbjct: 239 RALAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQDY 298

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +++KNSWG  WG+ GY+ MARNS +     CG+  QASYP+
Sbjct: 299 YIIKNSWGERWGQEGYVLMARNSKNE----CGVATQASYPL 335


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|159792912|gb|ABW98676.1| cathepsin L [Apostichopus japonicus]
          Length = 332

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 177/317 (55%), Gaps = 42/317 (13%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFA 111
           +  ++ +E W + +S++Y  E+E  RR  I+  N+Q +   N+++     S+ L  NK+A
Sbjct: 22  KGFDDTWEAWKQTHSKQYTKEEEDNRR-KIWEDNLQKVSKHNTEHSLGLHSYTLGMNKYA 80

Query: 112 DLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSC 166
           DL  EEF+    G     +  R   +++L       P SVDWR EG VTPVKDQGQCGSC
Sbjct: 81  DLRGEEFVQMMNGLKFDASRER-QGIKFLSYAKFQAPDSVDWRDEGYVTPVKDQGQCGSC 139

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFS   ++EG +   TG L SLSEQ LVDC ++  N GC GG M+ AF++I    G+ T
Sbjct: 140 WAFSTTGSLEGQHFRSTGVLTSLSEQNLVDCSISYGNNGCEGGLMDYAFQYIKDNLGIDT 199

Query: 227 EDDYPYRGKNDRCQTDKTKHHAVTITGY----------------------EAIPARY-AF 263
           ED YPY  ++D C+     +   T +GY                       AI A + +F
Sbjct: 200 EDKYPYEAEDDTCRF-SPDNVGATDSGYVDVDSGDEDALKEACAANGPISVAIDASHESF 258

Query: 264 QLYSHGVFD-EYCGH-QLNHGVTVVGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSP 320
           QLY  GV+D E C   +L+HGV VVGYG D  G  YW+VKNSWG SWG+ GYI M+RN  
Sbjct: 259 QLYESGVYDEESCSSIELDHGVLVVGYGTDSVGGDYWIVKNSWGLSWGQEGYIWMSRNKD 318

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI   ASYP 
Sbjct: 319 NQ----CGIATSASYPT 331


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/304 (42%), Positives = 170/304 (55%), Gaps = 39/304 (12%)

Query: 69  YSREYGSEDEWQRRFGIYSSNVQYIDYIN----SQNLSFKLTDNKFADLSNEEFISTYLG 124
           + +EY S+ E + R  IY  N   +   N        S+++  NKF DL + EF S   G
Sbjct: 34  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILFEKGEKSYQVAMNKFGDLLHHEFRSIMNG 93

Query: 125 Y-NKPYNEPRWPSV------QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           Y +K  N  R  S         + +P SVDWR++GA+TPVKDQGQCG CWAFS+  A+EG
Sbjct: 94  YQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQCGPCWAFSSTGALEG 153

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
               KTGKLVSL EQ L+DC     N+GCNGG M++AF++I    G+ TE+ YPY  ++D
Sbjct: 154 QTFRKTGKLVSLREQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDD 213

Query: 238 RC--------------------QTDKTKHHAVTITGYE-AIPARY-AFQLYSHGVFDE-Y 274
            C                    + DK K    T+     AI A + +FQ YS GV+ E  
Sbjct: 214 VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPS 273

Query: 275 C-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQA 333
           C    L+HGV VVGYG D+G+ YWLVKNSW   WG+ GYI++ARN  +     CG+   A
Sbjct: 274 CDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDQGYIKIARNRKNH----CGVATAA 329

Query: 334 SYPV 337
           SYP+
Sbjct: 330 SYPL 333


>gi|417399134|gb|JAA46597.1| Putative cathepsin l1 [Desmodus rotundus]
          Length = 335

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 179/321 (55%), Gaps = 41/321 (12%)

Query: 52  KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTD 107
           K+D  S+   +  W   Y R YG+++E  RR  ++  N + I+  N +       F +  
Sbjct: 20  KFD-HSLNAEWYQWKATYRRLYGADEEGWRR-AVWEKNRKMIELHNREYSQRKHGFTMAM 77

Query: 108 NKFADLSNEEF---ISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           N F D++NEEF   ++ +L   +  N   +    +  +P+SVDWR++G VTPVK+QGQCG
Sbjct: 78  NAFGDMTNEEFRQVMNGFLKQKQHRNGRLFREPLFAEIPSSVDWRQKGYVTPVKNQGQCG 137

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           SCWAFSA  A+EG    KTGKLVSLSEQ LVDC  +  NQGCNGG M+ AF+++    G+
Sbjct: 138 SCWAFSANGALEGQMFRKTGKLVSLSEQNLVDCSHSQGNQGCNGGLMDNAFQYVKDNKGL 197

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYA 262
            +E+ YPY G+       + ++ A   TG+  IP                         +
Sbjct: 198 DSEESYPYLGRESNTCNYRPEYSAANDTGFVDIPQHERGLMKAVATVGPISVAIDAGHSS 257

Query: 263 FQLYSHGVFDE-YCGHQ-LNHGVTVVGYGEDHGE----KYWLVKNSWGTSWGEAGYIRMA 316
           FQ YS G++ E  C  + L+HGV VVGYG +  +    K+W+VKNSWGT WG +GY++MA
Sbjct: 258 FQFYSEGIYYEPNCSSKDLDHGVLVVGYGSEGAQSDSNKFWIVKNSWGTGWGMSGYVKMA 317

Query: 317 RNSPSSNIGICGILMQASYPV 337
           R+  +     CGI   ASYP 
Sbjct: 318 RDQSNH----CGIATAASYPT 334


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 172/312 (55%), Gaps = 47/312 (15%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           E++  +Y R+Y   +E   R  I+  N +YI+  N +     ++F L  NKF D++ EEF
Sbjct: 21  EHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF 80

Query: 119 ISTYLGYNKPYNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            +   G     N PR        +P  +       VDWR +GAVTPVKDQGQCGSCWAFS
Sbjct: 81  NAVMKG-----NIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFS 135

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
              ++EG + LKTG L+SL+EQ+LVDC      QGCNGG+M  AF++I    G+ TE  Y
Sbjct: 136 TTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEASY 195

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYS 267
           PY  ++  C+ D +   A T +G+  I                        A  +FQ YS
Sbjct: 196 PYEARDGSCRFD-SNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYS 254

Query: 268 HGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
            GV+ E  C    L+H V  VGYG + G+ +WLVKNSW TSWG+AGYI+M+RN  ++   
Sbjct: 255 SGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNN--- 311

Query: 326 ICGILMQASYPV 337
            CGI   ASYP+
Sbjct: 312 -CGIATVASYPL 322


>gi|313118762|gb|ADR32293.1| C14 cysteine protease [Solanum stoloniferum]
          Length = 217

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 134/218 (61%), Gaps = 24/218 (11%)

Query: 143 PASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSE 202
           P SVDWR +G +  VKDQG CGSCWAFSAVAA+E IN + TG L+SLSEQELVDCD  S 
Sbjct: 2   PVSVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCD-KSY 60

Query: 203 NQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-- 260
           N+GC+GG M+ AFEF+   GG+ +E+DYPY+ +ND C   +     V I  YE +P    
Sbjct: 61  NEGCDGGLMDYAFEFVINNGGIDSEEDYPYKERNDVCDQYRKNAKVVKIDSYEDVPVNNE 120

Query: 261 --------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVK 300
                                 FQ Y  G+F   CG  ++HGV   GYG ++G  YW+V+
Sbjct: 121 KALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVAAGYGTENGMDYWIVR 180

Query: 301 NSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           NSWG  WGE GY+R+ RN   S+ G+CG+  + SYPVK
Sbjct: 181 NSWGAKWGEKGYLRVQRNIARSS-GLCGLATEPSYPVK 217


>gi|302831223|ref|XP_002947177.1| hypothetical protein VOLCADRAFT_103269 [Volvox carteri f.
           nagariensis]
 gi|300267584|gb|EFJ51767.1| hypothetical protein VOLCADRAFT_103269 [Volvox carteri f.
           nagariensis]
          Length = 514

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 171/343 (49%), Gaps = 72/343 (20%)

Query: 62  FENWLKQYSREYGSED-EWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFIS 120
           F  W +QY R Y  +  E+ RR  I+S NV+ I   + ++    L  N++ADL+ EEF S
Sbjct: 38  FTLWSRQYGRTYVEQSPEYTRRLSIFSDNVRAIQESHEKDPGVTLALNEYADLTWEEFSS 97

Query: 121 TYLGYNKPYNE------------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
           T LG     ++              W     +  P ++DWR++GAV  VK+QGQCGSCWA
Sbjct: 98  TRLGLRIDQDQLDRRSRRSASRRNAWRYAAAVDNPKAIDWREKGAVAEVKNQGQCGSCWA 157

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDV-------------------------NSEN 203
           FS   A+EGIN + TG+L SLSEQ+LVDCD                          N  N
Sbjct: 158 FSTTGAIEGINAIVTGQLQSLSEQQLVDCDTGKRTVTRSKRSCTVILPSYSSNSCRNESN 217

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK-------NDRCQTDKTKHHAVTITGYEA 256
            GC+GG M+ AF+++ + GG+ TE DY Y          N R QTD+    AV+I GYE 
Sbjct: 218 MGCSGGLMDDAFKYVIQNGGLDTEQDYAYWSGYGLGFWCNKRKQTDRP---AVSIDGYED 274

Query: 257 IP--------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYG-EDHGEK 295
           +P                    A  + Q YS GV    C   LNHGV  VGY     GEK
Sbjct: 275 VPQGEDNLLKAVAHQPVAVAICAGASMQFYSRGVISTCC-EGLNHGVLTVGYNVSQDGEK 333

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           YW+VKNSWG  WGE GY R+         G+CGI   ASYP K
Sbjct: 334 YWIVKNSWGAGWGEQGYFRLKMG--VGETGLCGIASAASYPTK 374


>gi|300175245|emb|CBK20556.2| unnamed protein product [Blastocystis hominis]
          Length = 325

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 172/315 (54%), Gaps = 41/315 (13%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D  S+E +F  + K++ + Y  E+E + R  ++S+N++ +DY NS+  SF L    F DL
Sbjct: 16  DTLSVELQFAAFEKKFGKTYVGEEERRFRMSVFSNNLKIVDYYNSKQSSFVLGITPFIDL 75

Query: 114 SNEEFISTYLGYNKPYNEP---------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCG 164
           SN+EF   +   N  + +          +  S  Y  LP S+DWR +  V+ VKDQ  CG
Sbjct: 76  SNDEFRERFAS-NTAFEKKAKSVESSSSQQTSQDYSSLPRSIDWRAKNTVSSVKDQKNCG 134

Query: 165 SCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGV 224
           +CWAF+AVA++EG+   KTGK++  S Q+LVDCD +S   GC+GG M  A+E++    G+
Sbjct: 135 ACWAFAAVASIEGVYAQKTGKILDFSPQQLVDCDYSS--LGCSGGLMTYAYEYVMN-NGI 191

Query: 225 TTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPA----------------------RYA 262
           + E DYPY+     C   K      +I GY  +P                          
Sbjct: 192 SLESDYPYKASQGSC---KKVDFVTSIMGYYEVPVGSTYELLKATTKNPVSVAIGADSIF 248

Query: 263 FQLYSHGVF-DEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
           FQLY+ G+  +E CG  LNHGV +VGY  D    + +VKNSWG SWGE GYIR+A +   
Sbjct: 249 FQLYTSGILAEELCGTTLNHGVLLVGYELDTATPFLIVKNSWGASWGEKGYIRLALS--D 306

Query: 322 SNIGICGILMQASYP 336
           S  G CGI + ASYP
Sbjct: 307 SYAGTCGINLMASYP 321


>gi|261289783|ref|XP_002611753.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
 gi|229297125|gb|EEN67763.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
          Length = 307

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/297 (42%), Positives = 171/297 (57%), Gaps = 42/297 (14%)

Query: 78  EWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYLG---YNKPYN 130
           E  RR  I+ +N + I+  N++      ++ L  N+FA ++N+EF++  +G    ++  +
Sbjct: 15  EESRRMEIFENNTKLINLHNNEADLGMHTYWLGHNQFAHMTNDEFVANVIGGCLLDRNAS 74

Query: 131 EPRWPSV-QY----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK 185
           +     V QY    + LP +VDWR +G VTPVK+Q QCGSCWAFS   ++EG    KTGK
Sbjct: 75  KSTADRVHQYDSNLVELPDTVDWRTKGYVTPVKNQEQCGSCWAFSTTGSLEGQTFKKTGK 134

Query: 186 LVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTK 245
           LVSLSEQ LVDC     NQGCNGG M+ AF++I   GG+ TED YPY  ++ +C+  K  
Sbjct: 135 LVSLSEQNLVDCSGEFGNQGCNGGLMDDAFKYIKANGGIDTEDSYPYEARDGKCRF-KPA 193

Query: 246 HHAVTITGYEAI-----------------------PARYAFQLYSHGVFDE-YCGH-QLN 280
               T+TGY  I                        + + FQ+YSHGV+ E  C   +L+
Sbjct: 194 DVGATVTGYTDISEGDEGALTQAVATVGPISVAIDASHHTFQMYSHGVYYEPQCSSTELD 253

Query: 281 HGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           HGV  VGYG + G+ YWLVKNSWG  WG+ GYI M+RN  +     CGI   ASYP+
Sbjct: 254 HGVLAVGYGTEGGKDYWLVKNSWGEVWGQNGYIMMSRNKNNQ----CGIATSASYPL 306


>gi|351629617|gb|AEQ54772.1| KDEL-tailed cysteine proteinase CP4, partial [Coffea canephora]
          Length = 215

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/202 (53%), Positives = 134/202 (66%), Gaps = 26/202 (12%)

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCWAFS V  VEGINK+KTG+LVSLSEQELVDC+  ++N+GCNGG ME A+EFI K
Sbjct: 1   GKCGSCWAFSTVVGVEGINKIKTGQLVSLSEQELVDCE--TDNEGCNGGLMENAYEFIKK 58

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR-------------------- 260
            GG+TTE  YPY+ ++  C + K    AVTI G+E +PA                     
Sbjct: 59  SGGITTERLYPYKARDGSCDSSKMNAPAVTIDGHEMVPANDENALMKAVANQPVSVAIDA 118

Query: 261 --YAFQLYSHGVFD-EYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIRMA 316
                Q YS GV+  + CG++L+HGV VVGYG    G KYW+VKNSWGT WGE GYIRM 
Sbjct: 119 SGSDMQFYSEGVYTGDSCGNELDHGVAVVGYGTALDGTKYWIVKNSWGTGWGEQGYIRMQ 178

Query: 317 RNSPSSNIGICGILMQASYPVK 338
           R   ++  G+CGI M+ASYP+K
Sbjct: 179 RGVDAAEGGVCGIAMEASYPLK 200


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 177/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +++L  
Sbjct: 17  YPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +  R     Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPTSYSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MAR
Sbjct: 253 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWGNKGYILMAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|290462225|gb|ADD24160.1| Cathepsin L [Lepeophtheirus salmonis]
          Length = 334

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/308 (42%), Positives = 168/308 (54%), Gaps = 37/308 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEF 118
           E+W   + + Y S  E + R  I+  N   I   N++ +    ++ +  N + DL + EF
Sbjct: 30  ESWKLTHQKGYDSSVEEKLRLKIFMENSLRISRHNAEAIQGRHTYFMKMNHYGDLLHHEF 89

Query: 119 ISTYLGY---NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           ++   GY   NK      +   + + LP  VDWR+EGAVTPVK+QGQCGSCW+FSA  ++
Sbjct: 90  VAMVNGYIYNNKTTLGGTFIPSKNINLPEHVDWREEGAVTPVKNQGQCGSCWSFSATGSL 149

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  KTGKL+SLSEQ LVDC     N GC GG M+ AF++I    G+ TE  YPY G 
Sbjct: 150 EGQDFRKTGKLISLSEQNLVDCSRKYGNNGCEGGLMDYAFKYIQDNNGIDTEASYPYEGI 209

Query: 236 NDRCQTD-------------------KTKHHAVTITG--YEAIPARY-AFQLYSHGVFDE 273
           +  C  D                   K    A+   G    AI A + +FQ YSHGV+ E
Sbjct: 210 DGHCHYDPKNKGGSDIGFVDIKKGSEKDLQKALATVGPISVAIDASHMSFQFYSHGVYSE 269

Query: 274 -YCG-HQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
             C    L+HGV  VGYG D   GE YWLVKNSW   WGE GYI+MARN  +    +CGI
Sbjct: 270 KKCSPENLDHGVLAVGYGTDEVTGEDYWLVKNSWSEKWGEDGYIKMARNKDN----MCGI 325

Query: 330 LMQASYPV 337
              ASYPV
Sbjct: 326 ASSASYPV 333


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/335 (39%), Positives = 182/335 (54%), Gaps = 38/335 (11%)

Query: 34  LLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
           + W+  +  G  +     + DP +++  ++ W K YS+ Y  + E   R  I+  N++++
Sbjct: 1   MKWLACVLLGCSAAVAQLQRDP-TLDRHWDLWKKTYSKHYREKIEEVARRLIWEKNLKFV 59

Query: 94  DYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASV 146
              N ++     S+ L  N   D+++EE IS       P    R   + S     LP S+
Sbjct: 60  MLHNLEHSMGMHSYDLGMNHLGDMTSEEVISLMGSLTVPSQWQRNVTYKSNPNQKLPDSL 119

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQG 205
           DWR +G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC      N+G
Sbjct: 120 DWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYSNKG 179

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           CNGG+M  AF++I    G+ +E  YPY+ ++ +CQ D +K  A T + Y  +P       
Sbjct: 180 CNGGFMTSAFQYIIDNNGIDSEASYPYKAQDGKCQYD-SKFRAATCSKYTELPFGSEEAL 238

Query: 259 ----------------ARYAFQLYSHGV-FDEYCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                           +  +F LY  GV +D+ C  ++NHGV VVGYG   G+ YWLVKN
Sbjct: 239 KEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSCTLKVNHGVLVVGYGNLDGKDYWLVKN 298

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           SWG ++G+ GYIRMARNS +     CGI    SYP
Sbjct: 299 SWGLNFGDKGYIRMARNSGNH----CGIASYPSYP 329


>gi|225709022|gb|ACO10357.1| Cathepsin L precursor [Caligus rogercresseyi]
          Length = 332

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/308 (42%), Positives = 170/308 (55%), Gaps = 37/308 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEF 118
           E+W   + + Y S  E + R  I+  N   I   N++ +    S+ +  N + DL + EF
Sbjct: 28  ESWKLTHGKSYESSIEEKLRLKIHMENSLKISRHNAEAINGKHSYYMKMNHYGDLLHHEF 87

Query: 119 ISTYLGY---NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           ++   GY   NK      +   + + LP  VDWR++GAVTPVK+QGQCGSCWAFS+  ++
Sbjct: 88  VAMVNGYEYVNKTSLGGSFIPSKNVKLPTHVDWREDGAVTPVKNQGQCGSCWAFSSTGSL 147

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG    KTGKL+ LSEQ LVDC     N GC GG M+ AF +I    G+ TE  YPY G 
Sbjct: 148 EGQTFRKTGKLIPLSEQNLVDCSRKYGNNGCEGGLMDFAFTYIRDNKGIDTEGSYPYEGV 207

Query: 236 NDRCQTDKTKHHAVTI------TGYE---------------AIPARY-AFQLYSHGV-FD 272
             RC  D +K  +  I       G E               AI A + +FQ YSHGV F+
Sbjct: 208 GGRCHYDPSKKGSSDIGFVDVKKGSEEELLKAVASVGPVSVAIDASHMSFQFYSHGVYFE 267

Query: 273 EYCG-HQLNHGVTVVGYG--EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGI 329
             C    L+HGV VVGYG  E+ GE YWLVKNSW  +WG+ GYI+MARN  +    +CGI
Sbjct: 268 SKCSPENLDHGVLVVGYGTDENSGEDYWLVKNSWSENWGDQGYIKMARNKKN----MCGI 323

Query: 330 LMQASYPV 337
              ASYPV
Sbjct: 324 ASSASYPV 331


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 177/314 (56%), Gaps = 43/314 (13%)

Query: 58  MEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFAD 112
           ++ ++E W K Y ++Y ++ DE  RR  I+  N+++I   N +      +++L  N   D
Sbjct: 23  LDTQWELWKKTYGKQYNNKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGD 81

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCW 167
           +++EE +    G   P +  R     Y+       P S+D+RK+G VTPVK+QGQCGSCW
Sbjct: 82  MTSEEVVQKMTGLKVPPSRSRSNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQCGSCW 141

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  G+ +E
Sbjct: 142 AFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNRGIDSE 199

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY------------AFQ 264
           D YPY G+++ C  + T   A    GY  IP           AR             +FQ
Sbjct: 200 DAYPYVGQDESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQ 258

Query: 265 LYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
            YS GV +DE C    LNH V  VGYG   G K+W++KNSWG +WG  GYI MARN  ++
Sbjct: 259 FYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNA 318

Query: 323 NIGICGILMQASYP 336
               CGI   AS+P
Sbjct: 319 ----CGIANLASFP 328


>gi|391338870|ref|XP_003743778.1| PREDICTED: cathepsin L-like isoform 1 [Metaseiulus occidentalis]
 gi|391338872|ref|XP_003743779.1| PREDICTED: cathepsin L-like isoform 2 [Metaseiulus occidentalis]
 gi|391338874|ref|XP_003743780.1| PREDICTED: cathepsin L-like isoform 3 [Metaseiulus occidentalis]
          Length = 331

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/338 (37%), Positives = 184/338 (54%), Gaps = 43/338 (12%)

Query: 33  FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQY 92
           FL+  + + A + +    Q +D +     ++N+   ++++Y        R  I+  N   
Sbjct: 3   FLILAVLVGAASAALTLEQLFDAE-----WQNFKVHHNKKYEGSTVEAFRKKIFLQNTHL 57

Query: 93  IDYINSQN----LSFKLTDNKFADLSNEEFISTYLGY---NKPYNEPRWPSVQYLGLPAS 145
           I   N ++     ++KL  N+F D+ + EF+ST  G    N+ Y    W   + + LP S
Sbjct: 58  IARHNIKHAKGETTYKLKMNQFGDMLHHEFVSTMNGLLRSNRTYFGSTWIEPESVSLPKS 117

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           VDWR++GAVTPVK+QG CGSCW+FS   A+EG    KTG+LVSLSEQ L+DC  +  N G
Sbjct: 118 VDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYGNNG 177

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           C GG M+ AF +I +  G+ TE+ YPY GK  +C+  K +  A   TG+  IP       
Sbjct: 178 CGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHK-EDSAGRDTGFVDIPSGNERAL 236

Query: 259 ----------------ARYAFQLYSHGVFD--EYCGHQLNHGVTVVGYG-EDHGEKYWLV 299
                           +  +FQ Y  GV++  +   H L+HGV  VGYG  D G+ Y+++
Sbjct: 237 AKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQDYYII 296

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           KNSWG  WG+ GY+ MARNS +     CG+  QASYP+
Sbjct: 297 KNSWGERWGQEGYVLMARNSKNE----CGVATQASYPL 330


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/306 (41%), Positives = 170/306 (55%), Gaps = 40/306 (13%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYL 123
           ++ + Y SE E   R  IY  N   I   N +     + + +  N+F D+ + EF+ST  
Sbjct: 33  KHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHEFVSTRN 92

Query: 124 GYNKPY-NEPRWPS-------VQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAV 175
           G+ + Y ++PR  S       ++   LP +VDWR +GAVTPVK+QGQCGSCWAFSA  ++
Sbjct: 93  GFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSATGSL 152

Query: 176 EGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGK 235
           EG +  K+G +VSLSEQ LV C  +  N GC GG M+ AF++I    G+ TE  YPY G 
Sbjct: 153 EGQHFRKSGSMVSLSEQNLVGCSTDFGNNGCEGGLMDDAFKYIRANKGIDTEKSYPYNGT 212

Query: 236 NDRCQTDKTK-------------------HHAVTITG--YEAIPARY-AFQLYSHGVFDE 273
           +  C   K+                      AV   G    AI A + +FQ YS GV+DE
Sbjct: 213 DGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYDE 272

Query: 274 -YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILM 331
             C  + L+HGV VVGYG  +G  YW VKNSWGT+WG+ GYIRM+RN  +     CGI  
Sbjct: 273 PECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMSRNKKNQ----CGIAS 328

Query: 332 QASYPV 337
            AS P+
Sbjct: 329 SASIPL 334


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 172/312 (55%), Gaps = 47/312 (15%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEF 118
           E++  +Y R+Y   +E   R  I+  N +YI+  N +     ++F L  NKF D++ EEF
Sbjct: 21  EHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF 80

Query: 119 ISTYLGYNKPYNEPR--------WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
            +   G     N PR        +P  +       VDWR +GAVTPVKDQGQCGSCWAFS
Sbjct: 81  NAVMKG-----NIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFS 135

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
              ++EG + LKTG L+SL+EQ+LVDC      QGCNGG+M  AF++I    G+ TE  Y
Sbjct: 136 TTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAY 195

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAI-----------------------PARYAFQLYS 267
           PY  ++  C+ D +   A T +G+  I                        A  +FQ YS
Sbjct: 196 PYEARDGSCRFD-SNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYS 254

Query: 268 HGVFDE-YCGHQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIG 325
            GV+ E  C    L+H V  VGYG + G+ +WLVKNSW TSWG+AGYI+M+RN  ++   
Sbjct: 255 SGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNN--- 311

Query: 326 ICGILMQASYPV 337
            CGI   ASYP+
Sbjct: 312 -CGIATVASYPL 322


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 173/323 (53%), Gaps = 48/323 (14%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADL 113
           ++E +  +  Q+   Y SE E   R  IY+ +   I   N +     +S+KL  NK+ D+
Sbjct: 23  VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 82

Query: 114 SNEEFISTYLGYNKPYNE-------------PRWPSVQYLGLPASVDWRKEGAVTPVKDQ 160
            + EF+ T  G+NK                  ++ S   + LP  VDWRK GAVT +KDQ
Sbjct: 83  LHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQ 142

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCW+FS   A+EG +  ++G LVSLSEQ L+DC     N GCNGG M+ AF++I  
Sbjct: 143 GKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKD 202

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP---------------------- 258
            GG+ TE  YPY G +D+C+ +  K+      G+  IP                      
Sbjct: 203 NGGIDTEQTYPYEGVDDKCRYN-PKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAID 261

Query: 259 -ARYAFQLYSHGVF--DEYCGHQLNHGVTVVGYGED-HGEKYWLVKNSWGTSWGEAGYIR 314
            +  +FQLYS GV+  +E     L+HGV VVGYG D  G  YWLVKNSWG SWGE GYI+
Sbjct: 262 ASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIK 321

Query: 315 MARNSPSSNIGICGILMQASYPV 337
           M RN  +     CGI   ASYP+
Sbjct: 322 MIRNKNNR----CGIASSASYPL 340


>gi|296189340|ref|XP_002742739.1| PREDICTED: cathepsin L1 [Callithrix jacchus]
          Length = 333

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 177/317 (55%), Gaps = 42/317 (13%)

Query: 56  QSMEERFENWLKQYSREYG-SEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKF 110
           +S+E ++  W   ++R YG +E+EW+R   ++  N++ I+  N +      SF +  N F
Sbjct: 23  RSLEAQWIKWKAMHNRLYGMNEEEWRR--AVWEKNMKMIELHNHEYNQGKHSFTMAMNAF 80

Query: 111 ADLSNEEFISTYLGYN--KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWA 168
            D++NEEF     G+   KP N   +    +   P SVDWR++G VTPVK+QGQCGSCWA
Sbjct: 81  GDMTNEEFRQVMNGFQNRKPRNGKVFQEPLFHEAPRSVDWREKGYVTPVKNQGQCGSCWA 140

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  A+EG    KTGKLVSLSEQ LVDC     NQGC+GG M+ AF+++ + GG+ +E+
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNQGCDGGLMDYAFQYVQENGGLDSEE 200

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIP----------------------ARYAFQLY 266
            YPY    + C+ +  ++     TG+  IP                         +FQ Y
Sbjct: 201 SYPYEATEESCKYN-PEYSVANDTGFVDIPKLEKALMKAVATVGPISVAIDAGHESFQFY 259

Query: 267 SHGV-FDEYCGHQ-LNHGVTVVGYGEDH----GEKYWLVKNSWGTSWGEAGYIRMARNSP 320
             G+ F+  C  + ++HGV VVGYG +       KYWLVKNSWG  WG  GYI+MA++  
Sbjct: 260 KEGIYFEPECSSEDMDHGVLVVGYGFERTGSDNSKYWLVKNSWGEKWGMDGYIKMAKDRK 319

Query: 321 SSNIGICGILMQASYPV 337
           +     CGI   ASYP 
Sbjct: 320 NH----CGIASAASYPT 332


>gi|395856029|ref|XP_003800445.1| PREDICTED: cathepsin S [Otolemur garnettii]
          Length = 331

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 183/335 (54%), Gaps = 41/335 (12%)

Query: 34  LLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI 93
           L+W L +   A ++ +    DP +++  +  W K Y ++Y  ++E   R  I+  N++++
Sbjct: 4   LVWTLLVCCSAMAQLHR---DP-ALDHHWHLWKKTYGKQYTEKNEETERRLIWEKNLKFV 59

Query: 94  DYINSQNL----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPR---WPSVQYLGLPASV 146
              N ++     S+ L  N   D+++EE +S       P    R   + S     LP S+
Sbjct: 60  MLHNLEHSMGMHSYDLGMNHLGDMTSEEVVSLMTCLKVPRQSQRNVTYKSSPNQKLPDSL 119

Query: 147 DWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS-ENQG 205
           DWR++G VT VK QG CGSCWAFSAV A+E   KL TGKLVSLS Q LVDC      N+G
Sbjct: 120 DWREKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLTTGKLVSLSAQNLVDCSTEKYRNEG 179

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP------- 258
           C+GG+M +AF++I    G+ +E  YPY+  +++CQ D +K+ A T + Y  +P       
Sbjct: 180 CHGGFMTEAFQYIIDNNGIDSEASYPYKAMDEKCQYD-SKNRAATCSKYTELPFGSEEAL 238

Query: 259 ----------------ARYAFQLYSHGVFDE-YCGHQLNHGVTVVGYGEDHGEKYWLVKN 301
                           +  +F LY  GV+ E  C   +NHGV VVGYG  +G  YWLVKN
Sbjct: 239 KEAVASKGPVSVAIDASHSSFFLYRSGVYYEPACTQVVNHGVLVVGYGNLNGNDYWLVKN 298

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYP 336
           SWG  +G+ GYIRMARN  +     CGI   +SYP
Sbjct: 299 SWGLYFGDKGYIRMARNRENH----CGIASYSSYP 329


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/302 (42%), Positives = 167/302 (55%), Gaps = 37/302 (12%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKLTDNKFADLSNEEFISTYL 123
           +Y ++Y S  E   R  +Y  N ++I+  N Q     +SF L  N+F D++ EE  +   
Sbjct: 28  RYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDMTTEEINAAMN 87

Query: 124 GY-NKPYNEPRWPSVQYL--GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINK 180
           G+ +     PR    Q L   LP +VDWR +GAVTPVKDQ  CGSCWAFSA  ++EG + 
Sbjct: 88  GFLSAGKKVPRGTMYQPLVDELPDTVDWRDKGAVTPVKDQKACGSCWAFSATGSLEGQHF 147

Query: 181 LKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 240
           L TGKLVSLSEQ LVDC     N GC GG M+ AF +I    G+ TE+ YPY  KN  C+
Sbjct: 148 LSTGKLVSLSEQNLVDCSDKYGNFGCGGGLMDNAFRYIKDNNGIDTEESYPYEAKNGPCR 207

Query: 241 TDKTKHHAVTITGY----------------EAIPARYA-------FQLYSHGV-FDEYCG 276
            + + +   T++ Y                E  P   A       F  YS G+ +DE C 
Sbjct: 208 FN-SDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYYDEKCS 266

Query: 277 HQ-LNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASY 335
              L+HGV  VGYG D    YWLVKNSW  +WG++GYI+M+RN  ++    CGI  QASY
Sbjct: 267 SSFLDHGVLAVGYGTDDSSDYWLVKNSWNETWGDSGYIKMSRNRNNN----CGIASQASY 322

Query: 336 PV 337
           PV
Sbjct: 323 PV 324


>gi|73946536|ref|XP_541257.2| PREDICTED: cathepsin L1 [Canis lupus familiaris]
          Length = 333

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/342 (39%), Positives = 191/342 (55%), Gaps = 48/342 (14%)

Query: 31  SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           SLFL  + LGI + A     PQ+    S++  +  W + + + Y  ++E  RR  ++  N
Sbjct: 4   SLFLAALCLGIASAA-----PQQ--DHSLDAHWSQWKEAHGKLYDKDEEGWRR-TVWERN 55

Query: 90  VQYIDYINSQ----NLSFKLTDNKFADLSNEEF--ISTYLGYNKPYNEPRWPSVQYLGLP 143
           ++ I+  N +      SF L  N F D++NEEF  +       K      +P+  +  +P
Sbjct: 56  MEMIEQHNQEYSQGEHSFTLAMNAFGDMTNEEFKQVLNDFKIQKHKKGKVFPAPLFAEVP 115

Query: 144 ASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEN 203
           +SVDWR++G VTPVKDQGQC  CWAFSA  A+EG    KTGKLVSLSEQ LVDC  +  N
Sbjct: 116 SSVDWREQGYVTPVKDQGQCLGCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWSQGN 175

Query: 204 QGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI------ 257
           +GCNGG ME AF+++   GG+ +E+ YPY  +N+ C+  + +  A  +T +  I      
Sbjct: 176 RGCNGGLMEYAFQYVKDNGGLDSEESYPYLARNEPCKY-RPEKSAANVTAFWPILNEEDG 234

Query: 258 ---------PARYA-------FQLYSHGV-FDEYCGHQ-LNHGVTVVGYG----EDHGEK 295
                    P   A       FQ Y  G+ +D  C ++ LNHGV VVGYG    E   +K
Sbjct: 235 LMTTVATVGPVSAAVDSSPQSFQFYKKGIYYDPKCSNKLLNHGVLVVGYGFEGAESDNKK 294

Query: 296 YWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           YW+VKNSWGT+WG  GY+ +A++  +     CGI  +ASYPV
Sbjct: 295 YWIVKNSWGTNWGMQGYMLLAKDRDNH----CGIATRASYPV 332


>gi|225718114|gb|ACO14903.1| Cathepsin L precursor [Caligus clemensi]
          Length = 336

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 166/309 (53%), Gaps = 38/309 (12%)

Query: 63  ENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLS----FKLTDNKFADLSNEEF 118
           E+W   + + Y S  E + R  IY  N   I   NS+ L+    + +  N + DL + EF
Sbjct: 31  ESWKLMHGKTYSSSIEEKLRLKIYMENSLKISRHNSEALNGIHPYYMKMNHYGDLLHHEF 90

Query: 119 ISTYLGYNKPYNEPRWPSV----QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAA 174
           ++   GY                + + LP  VDWR+EGAVTPVK+QGQCGSCW+FSA  A
Sbjct: 91  VAMVNGYQYANKTASLGGTYIPNKNIQLPTHVDWREEGAVTPVKNQGQCGSCWSFSATGA 150

Query: 175 VEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRG 234
           +EG +  KTGKL+SLSEQ LVDC     N GC GG M+ AF +I    G+ TE  YPY G
Sbjct: 151 LEGQDFRKTGKLISLSEQNLVDCSRKFGNNGCEGGLMDFAFTYIRDNKGIDTEASYPYEG 210

Query: 235 KNDRCQ-------------------TDKTKHHAVTITG--YEAIPARY-AFQLYSHGVFD 272
            +  C                    ++K    AV   G    AI A + +FQ YSHGV+ 
Sbjct: 211 IDGHCHYNPKNKGGSDIGFVDIKKGSEKDLKKAVAGVGPISVAIDASHMSFQFYSHGVYV 270

Query: 273 EY--CGHQLNHGVTVVGYGED--HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           E      +L+HGV VVG+G D   GE YWLVKNSW   WG+ GYI+MARN  +    +CG
Sbjct: 271 ESKCSSEELDHGVLVVGFGTDSVSGEDYWLVKNSWSEKWGDQGYIKMARNKEN----MCG 326

Query: 329 ILMQASYPV 337
           I   ASYPV
Sbjct: 327 IASSASYPV 335


>gi|281204231|gb|EFA78427.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 329

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 179/336 (53%), Gaps = 39/336 (11%)

Query: 30  LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSN 89
           L L    ++G+ AG+      + +  +  + +F NW+    R+Y +  E++ R+  +  N
Sbjct: 3   LLLAFFMIVGLAAGS------RLFAEKHYQNQFTNWMVVQDRQYDAY-EFRTRYSAFKDN 55

Query: 90  VQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN----EPRWPSVQYLGLPAS 145
           + +I   N+ N   +L    FADL+NEE+ + YLG N   +    +P      Y  + ++
Sbjct: 56  LDFIHRWNAVNKETELGATVFADLTNEEYRAVYLGMNVDASNFAAQPATLDQVYQPVRST 115

Query: 146 VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG 205
           +DWR  GAV  VKDQGQCGSCWAFS   AVEG +++ TG  VSLSEQ+L+DC  +  N G
Sbjct: 116 LDWRNNGAVGRVKDQGQCGSCWAFSTTGAVEGAHQIATGNFVSLSEQQLMDCSRSYGNHG 175

Query: 206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI-------- 257
           C GG M+ A  +I K GG+ TE+ YPY  ++         ++   ++GY  I        
Sbjct: 176 CQGGLMDSAMSYIVKQGGINTEESYPYEMRDSYTCKYNPANNGAKLSGYSNIKRGSEADL 235

Query: 258 --------------PARYAFQLYSHGVF-DEYCGH-QLNHGVTVVGYGEDHGEKYWLVKN 301
                          +  +FQLY  GVF D  C    L+HGV  VGYG +    YW+VKN
Sbjct: 236 AAKLNIGPVAIALDASHSSFQLYKSGVFYDPACSSTSLSHGVLAVGYGTEGSSAYWIVKN 295

Query: 302 SWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           SWGT WG+AGYI +A++  +     CG+   +S P+
Sbjct: 296 SWGTRWGDAGYIWIAKDRNNH----CGVATMSSIPI 327


>gi|37905511|gb|AAO64477.1| cathepsin S precursor [Fundulus heteroclitus]
          Length = 337

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 169/313 (53%), Gaps = 39/313 (12%)

Query: 58  MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFADL 113
           +++ +E W K + +EY +E+E   R  ++  N+  I   N +      ++ L+ N   DL
Sbjct: 30  LDDHWELWKKTHGKEYQNEEENVHRRDLWEKNLMLITTHNLEASMGFHTYDLSMNFMGDL 89

Query: 114 SNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWA 168
           S EE +  Y     P +  R PS  ++G     +P ++D R++G VT V+ QG CGSCWA
Sbjct: 90  SQEEILQFYTTLTTPTDLQRAPS-SFVGASGADVPDTLDLREKGLVTAVRMQGACGSCWA 148

Query: 169 FSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTED 228
           FSA  A+EG    KTGKL +LS Q LVDC     N GCNGG+M KAF+++    G+ +ED
Sbjct: 149 FSAAGALEGQLAKKTGKLQNLSPQNLVDCSTKYGNHGCNGGFMHKAFQYVIDNQGIDSED 208

Query: 229 DYPYRGKNDRCQTDKTKHHAVTITGYEAIPA-----------------------RYAFQL 265
            YPYRG++ +CQ +     A   + Y+ +P                        R  F  
Sbjct: 209 SYPYRGRDQQCQYNPAT-RAANCSRYDFLPEGDEQALKEAIATIGPISVAIDARRPRFAF 267

Query: 266 YSHGVFDE-YCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNI 324
           Y  GV+D+  C   +NH V  VGYG   G+ YWLVKNSWGTS+G+ GYIRMARN      
Sbjct: 268 YRSGVYDDSSCTQNVNHAVLAVGYGSLGGQDYWLVKNSWGTSFGDQGYIRMARNKNDQ-- 325

Query: 325 GICGILMQASYPV 337
             CGI + A YP+
Sbjct: 326 --CGIALYACYPI 336


>gi|27806673|ref|NP_776457.1| cathepsin L2 precursor [Bos taurus]
 gi|1542853|emb|CAA62870.1| cathepsin L [Bos taurus]
          Length = 334

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 185/348 (53%), Gaps = 59/348 (16%)

Query: 31  SLFL-LWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYG-SEDEWQRRFGIYSS 88
           S FL +  LG+ + A       K DP +++  +  W   + R YG +E+EW+R   ++  
Sbjct: 4   SFFLTVLCLGVASAA------PKLDP-NLDAHWHQWKATHRRLYGMNEEEWRR--AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSV 137
           N + ID  N +      +F++  N F D++NEEF     G+        K ++EP     
Sbjct: 55  NKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPL---- 110

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
             + +P SVDW K+G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC
Sbjct: 111 -LVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                NQGCNGG M+ AF++I   GG+ +E+ YPY   +      K +  A   TG+  I
Sbjct: 170 SRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDI 229

Query: 258 PAR----------------------YAFQLYSHGV-FDEYCG-HQLNHGVTVVGYG---- 289
           P R                       +FQ Y  G+ +D  C    L+HGV VVGYG    
Sbjct: 230 PQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGT 289

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           + +  K+W+VKNSWG  WG  GY++MA++  +     CGI   ASYP 
Sbjct: 290 DSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNH----CGIATAASYPT 333


>gi|402898110|ref|XP_003912074.1| PREDICTED: cathepsin L2 [Papio anubis]
          Length = 334

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 185/349 (53%), Gaps = 59/349 (16%)

Query: 30  LSLFLL-WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           LSL L  + LGI +         K+D Q+++ ++  W   + R YG+ +E  RR  ++  
Sbjct: 3   LSLVLAAFCLGIASAV------PKFD-QNLDTKWYQWKATHRRLYGASEEGWRR-AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTY-------LGYNKPYNEPRWPSV 137
           N++ I+  N +       F +  N F D++NEEF           L   K + EP     
Sbjct: 55  NMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPL---- 110

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
            +L LP SVDWRK+G VTPVK+Q QCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC
Sbjct: 111 -FLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                NQGCNGG+M  AF ++ + GG+ +E+ YPY   +  C+  + ++     TG+E +
Sbjct: 170 SRPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKY-RPENSVANDTGFEVV 228

Query: 258 PA-----------------------RYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG--- 289
           PA                         +FQ Y  G+ F+  C  + L+HGV VVGYG   
Sbjct: 229 PAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEG 288

Query: 290 -EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
                 KYWLVKNSWG  WG  GY+++A++  +     CGI   ASYP 
Sbjct: 289 ANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNH----CGIATAASYPT 333


>gi|294885989|ref|XP_002771502.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
 gi|239875206|gb|EER03318.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
          Length = 337

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 178/322 (55%), Gaps = 41/322 (12%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADL 113
           D ++    F  + K++ + Y +++E  +R  I+  N+ YI+ +N+QNLS+KL  N++ DL
Sbjct: 19  DLEAAGLAFIGFQKKHGKSYDNKEEEMKRAAIFHDNLNYIEEVNAQNLSYKLGVNEYTDL 78

Query: 114 SNEEFISTYL-------GYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSC 166
           + EEF +  L       G    +     P+   L  P SVDWRK+G + PVKDQG CGSC
Sbjct: 79  TLEEFAALKLSSTDMSEGMGDGFVAGAGPTTTTL--PTSVDWRKKGVLNPVKDQGYCGSC 136

Query: 167 WAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTT 226
           WAFSA+ A+E    + TGKL+SLSEQ+LVDC     N+GCNGG M+KAFE+I K  GV  
Sbjct: 137 WAFSAIGALEPRYAIATGKLLSLSEQQLVDCAGAYGNEGCNGGLMDKAFEYI-KATGVDK 195

Query: 227 EDDYPYRGKNDRCQ------TDKTKHHAVT------------ITGYEAIP---ARYA--- 262
           E  YPY G ++ CQ      TD      VT            + G  A P   A YA   
Sbjct: 196 ESTYPYVGSDETCQATVENKTDGLPVGEVTGNQMLHQTEKALMEGVAAAPVSIAMYANLQ 255

Query: 263 -FQLYSHGVF-DEYC---GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
            FQ Y  GV+ D  C   G  ++HGV  VGYG ++G+ Y++++NSWG SWG+ GY+ + R
Sbjct: 256 SFQHYKSGVYSDPNCNAKGGSIDHGVVAVGYGTENGQDYFIIRNSWGRSWGQDGYVYLKR 315

Query: 318 NSPSSNIGICGILMQASYPVKR 339
              S   G C I      P  +
Sbjct: 316 GVGS--FGQCNIYKYMCVPTLK 335


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 182/326 (55%), Gaps = 53/326 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYSSNVQYI-----DYINSQNLSFKL 105
           K+D Q+    +  W   + R YG+ E+EW+R   I+  N++ I     +Y N Q+  F +
Sbjct: 20  KFD-QTFSAEWHQWKSTHRRLYGTNEEEWRR--AIWEKNMRMIQLHNGEYSNGQH-GFSM 75

Query: 106 TDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVK 158
             N F D++NEEF     GY        + + EP       L +P SVDWR++G VTPVK
Sbjct: 76  EMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPL-----MLKIPKSVDWREKGCVTPVK 130

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QGQCGSCWAFSA   +EG   LKTGKL+SLSEQ LVDC     NQGCNGG M+ AF++I
Sbjct: 131 NQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDYAFQYI 190

Query: 219 TKIGGVTTEDDYPYRGKNDRC------------------QTDKTKHHAVTITGYEAI--- 257
            + GG+ +E+ YPY  K+  C                  Q +K    AV   G  ++   
Sbjct: 191 KENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 258 PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAG 311
            +  + Q YS G++ E  C  + L+HGV +VGYG    + +  KYWLVKNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 312 YIRMARNSPSSNIGICGILMQASYPV 337
           YI++A++  +     CG+   ASYPV
Sbjct: 311 YIKIAKDRDNH----CGLATAASYPV 332


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 51/320 (15%)

Query: 56  QSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKF 110
           ++++ ++E W K + ++Y S+ DE  RR  I+  N++ I   N +      +++L  N  
Sbjct: 20  ETLDTQWELWKKTHGKQYNSKVDEISRRL-IWEKNLKKISVHNLEASLGAHTYELAMNHL 78

Query: 111 ADLSNEEFISTYLGYNKPYNE---------PRWPSVQYLGLPASVDWRKEGAVTPVKDQG 161
            D+++EE +    G   P +          P W       +P S+D+RK+G VTPVK+QG
Sbjct: 79  GDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGR----VPDSIDYRKKGYVTPVKNQG 134

Query: 162 QCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKI 221
           QCGSCWAFS+  A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ + 
Sbjct: 135 QCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCV--SENYGCGGGYMTTAFQYVQQN 192

Query: 222 GGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY--------- 261
           GG+ +ED YPY G+++ C  + T   A    GY  IP           AR          
Sbjct: 193 GGIDSEDAYPYVGQDESCMYNATA-KAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251

Query: 262 ---AFQLYSHGV-FDEYCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMA 316
              +FQ YS GV +DE C    +NH V VVGYG   G KYW++KNSWG SWG  GY+ +A
Sbjct: 252 SLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLA 311

Query: 317 RNSPSSNIGICGILMQASYP 336
           RN  ++    CGI   AS+P
Sbjct: 312 RNKNNA----CGITNLASFP 327


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/352 (38%), Positives = 185/352 (52%), Gaps = 68/352 (19%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
           MLR   +   L+ +LG+ +  W                 + + K + + YG ++E  RR 
Sbjct: 1   MLRTTAI---LVALLGLASANW-----------------DLYKKVHGKSYGHDEEHFRRQ 40

Query: 84  GIYSSNVQYIDYINSQNL-------SFKLTDNKFADLSNEEFIS----TYLGYNKPYNEP 132
             Y S    +  IN+ NL       ++++  NKF D+++EEF +     +       N  
Sbjct: 41  LFYKS----VAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRNFKGLKFDATKTKRNGT 96

Query: 133 RWPSVQYLG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLS 190
           R+   + LG  LP  VDWR++G VTPVK+QGQCGSCWAFS   ++EG +   TGKLVSLS
Sbjct: 97  RFQK-ELLGEALPTQVDWREKGYVTPVKNQGQCGSCWAFSTTGSLEGQHFKATGKLVSLS 155

Query: 191 EQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVT 250
           EQ LVDC     N GCNGG M+  F +I + GG+ TE+ YPY GK+  C  ++    A  
Sbjct: 156 EQNLVDCSRVEGNNGCNGGLMDNGFTYIQQNGGIDTEESYPYTGKDGDCAFNENSVGA-R 214

Query: 251 ITGYEAIPAR-----------------------YAFQLYSHGVFDE-YCG-HQLNHGVTV 285
           + G+  +P R                        +FQ Y  GV+DE  C   QL+HGV V
Sbjct: 215 VKGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYYKEGVYDEPSCSFSQLDHGVLV 274

Query: 286 VGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           VGYG ++G  YWLVKNSWG +WG+ GYI+M RN  +     CGI   ASYP 
Sbjct: 275 VGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRNKENQ----CGIASMASYPT 322


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 182/326 (55%), Gaps = 53/326 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYSSNVQYI-----DYINSQNLSFKL 105
           K+D Q+    +  W   + R YG+ E+EW+R   I+  N++ I     +Y N Q+  F +
Sbjct: 20  KFD-QTFSAEWHQWKSTHRRLYGTNEEEWRR--AIWEKNMRMIQLHNGEYSNGQH-GFSM 75

Query: 106 TDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVK 158
             N F D++NEEF     GY        + + EP       L +P SVDWR++G VTPVK
Sbjct: 76  EMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPL-----MLKIPKSVDWREKGCVTPVK 130

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QGQCGSCWAFSA   +EG   LKTGKL+SLSEQ LVDC     NQGCNGG M+ AF++I
Sbjct: 131 NQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYI 190

Query: 219 TKIGGVTTEDDYPYRGKNDRC------------------QTDKTKHHAVTITGYEAI--- 257
            + GG+ +E+ YPY  K+  C                  Q +K    AV   G  ++   
Sbjct: 191 KENGGLDSEESYPYEAKDGSCKYRAEFAVANGTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 258 PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAG 311
            +  + Q YS G++ E  C  + L+HGV +VGYG    + +  KYWLVKNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 312 YIRMARNSPSSNIGICGILMQASYPV 337
           YI++A++  +     CG+   ASYPV
Sbjct: 311 YIKIAKDRDNH----CGLATAASYPV 332


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 182/326 (55%), Gaps = 53/326 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYSSNVQYI-----DYINSQNLSFKL 105
           K+D Q+    +  W   + R YG+ E+EW+R   I+  N++ I     +Y N Q+  F +
Sbjct: 20  KFD-QTFSAEWHQWKSTHRRLYGTNEEEWRR--AIWEKNMRMIQLHNGEYSNGQH-GFSM 75

Query: 106 TDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVK 158
             N F D++NEEF     GY        + + EP       L +P SVDWR++G VTPVK
Sbjct: 76  EMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPL-----MLKIPKSVDWREKGCVTPVK 130

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QGQCGSCWAFSA   +EG   LKTGKL+SLSEQ LVDC     NQGCNGG M+ AF++I
Sbjct: 131 NQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYI 190

Query: 219 TKIGGVTTEDDYPYRGKNDRC------------------QTDKTKHHAVTITGYEAI--- 257
            + GG+ +E+ YPY  K+  C                  Q +K    AV   G  ++   
Sbjct: 191 KENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 258 PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAG 311
            +  + Q YS G++ E  C  + L+HGV +VGYG    + +  KYWLVKNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 312 YIRMARNSPSSNIGICGILMQASYPV 337
           YI++A++  +     CG+   ASYPV
Sbjct: 311 YIKIAKDRDNH----CGLATAASYPV 332


>gi|291383484|ref|XP_002708316.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 171/316 (54%), Gaps = 40/316 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFA 111
           +S++ R+  W  Q+ R Y   +EW+RR  ++  N++ I+  N +       F +  N + 
Sbjct: 23  RSLDARWSQWKAQHRRAYSPHEEWRRR-AVWEKNMRMIELHNGEYSQGKRGFSMAMNAYG 81

Query: 112 DLSNEEFISTYLGYNKPYN--EPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           D+++EEF     G++   +  E  +    +  +P+SVDWR +G VTPVK QG+CGSCWAF
Sbjct: 82  DMTSEEFRQVMNGFHHQPDKKEKVFGKAVFQEVPSSVDWRDKGYVTPVKKQGRCGSCWAF 141

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA  A+EG    KTG+LVSLSEQ L+DC   + N GC GG  + AF+++   GG+ +ED 
Sbjct: 142 SATGALEGQMFRKTGRLVSLSEQNLIDCSWPAGNHGCRGGLTDHAFQYVKDNGGLDSEDS 201

Query: 230 YPYRGKNDRCQTDKTKHHAVTITGYEAIPARY----------------------AFQLYS 267
           YPY  +N  C+ D  K  A   TG+  IP +                       +FQ Y 
Sbjct: 202 YPYEARNLPCRYDPQKSVA-NGTGFVRIPRQENALMEAVATVGPIAVAIDAGHPSFQFYK 260

Query: 268 HGVFDE--YCGHQLNHGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPS 321
            G++ E        NH V VVGYG    E    KYWLVKNSWG  WGEAGYIR+A++  +
Sbjct: 261 EGIYYEPNCSSKHHNHAVLVVGYGYEGAESDSNKYWLVKNSWGKRWGEAGYIRIAKDRNN 320

Query: 322 SNIGICGILMQASYPV 337
                CGI   ASYP 
Sbjct: 321 H----CGIASHASYPT 332


>gi|74834619|sp|O97397.1|CATLL_PHACE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|4210800|emb|CAA76927.1| thiol protease [Phaedon cochleariae]
          Length = 324

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/319 (36%), Positives = 178/319 (55%), Gaps = 46/319 (14%)

Query: 54  DPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYI-----DYINSQNLSFKLTDN 108
           +  S +E + ++ K ++R Y S  E + RF I+   ++ I      Y N ++ ++ L  N
Sbjct: 15  NAASDQELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGES-TYYLAIN 73

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSVQYL--------GLPASVDWRKEGAVTPVKDQ 160
           KF+D+++EEF    +      NE   P+++ L          P S+DWR +G V PV++Q
Sbjct: 74  KFSDITDEEFRDMLM-----KNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQ 128

Query: 161 GQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITK 220
           G+CGSCWA S  AA+E  + +K+G  V LS Q+LVDC  +  N GCNGG+    FE++ K
Sbjct: 129 GECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYV-K 187

Query: 221 IGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYA------------------ 262
             G+ ++ DYPY GK D+C+ +      V +TGY+ + A                     
Sbjct: 188 DNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFG 247

Query: 263 --FQLYSHGVFDEYC--GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
              + Y  G+FD+    G  L+HGV VVGYG ++G+KYW++KN+WG  WGE+GYIR+ R+
Sbjct: 248 KPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRD 307

Query: 319 SPSSNIGICGILMQASYPV 337
           +  S    CG+   ASYP+
Sbjct: 308 TDHS----CGVEKMASYPI 322


>gi|109940313|sp|P25975.3|CATL1_BOVIN RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|74354943|gb|AAI02313.1| CTSL2 protein [Bos taurus]
 gi|154425700|gb|AAI51426.1| Cathepsin L2 [Bos taurus]
 gi|296484466|tpg|DAA26581.1| TPA: cathepsin L2 precursor [Bos taurus]
 gi|440898893|gb|ELR50299.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 334

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 185/348 (53%), Gaps = 59/348 (16%)

Query: 31  SLFL-LWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYG-SEDEWQRRFGIYSS 88
           S FL +  LG+ + A       K DP +++  +  W   + R YG +E+EW+R   ++  
Sbjct: 4   SFFLTVLCLGVASAA------PKLDP-NLDAHWHQWKATHRRLYGMNEEEWRR--AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSV 137
           N + ID  N +       F++  N F D++NEEF     G+        K ++EP     
Sbjct: 55  NKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPL---- 110

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
             + +P SVDW K+G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC
Sbjct: 111 -LVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                NQGCNGG M+ AF++I   GG+ +E+ YPY   +      K +  A   TG+  I
Sbjct: 170 SRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDI 229

Query: 258 PAR----------------------YAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG---- 289
           P R                       +FQ Y  G+ +D  C  + L+HGV VVGYG    
Sbjct: 230 PQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGT 289

Query: 290 EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           + +  K+W+VKNSWG  WG  GY++MA++  +     CGI   ASYP 
Sbjct: 290 DSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNH----CGIATAASYPT 333


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 177/314 (56%), Gaps = 43/314 (13%)

Query: 58  MEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNL----SFKLTDNKFAD 112
           ++ ++E W K YS++Y S+ DE  RR  I+  N+++I   N +      +++L  N   D
Sbjct: 22  LDTQWELWKKTYSKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGD 80

Query: 113 LSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCW 167
           +++EE +    G   P +        Y+       P S+D+RK+G VTPVK+QGQCGSCW
Sbjct: 81  MTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCW 140

Query: 168 AFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTE 227
           AFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ +  G+ +E
Sbjct: 141 AFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENYGCGGGYMTNAFQYVQRNRGIDSE 198

Query: 228 DDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY------------AFQ 264
           D YPY G+++ C  + T   A    GY  IP           AR             +FQ
Sbjct: 199 DAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQ 257

Query: 265 LYSHGV-FDEYCGH-QLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
            YS GV +DE C    +NH V  VGYG   G K+W++KNSWG SWG  GYI MARN  ++
Sbjct: 258 FYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNA 317

Query: 323 NIGICGILMQASYP 336
               CGI   AS+P
Sbjct: 318 ----CGIANLASFP 327


>gi|322799749|gb|EFZ20954.1| hypothetical protein SINV_06041 [Solenopsis invicta]
          Length = 337

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 168/307 (54%), Gaps = 42/307 (13%)

Query: 68  QYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTYL 123
            +++ Y S  E   R  IY  N + I   N +     +++KL  NK+ D+ + EF++T  
Sbjct: 35  HHNKVYKSPVEEGYRMKIYMDNKRKIAEHNRKYELNEVTYKLGMNKYGDMLHHEFVNTLN 94

Query: 124 GYNKPYNEP------RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEG 177
           G+NK            + S   + LP  VDW K+GAVT VKDQG CGSCWAFS+  A+EG
Sbjct: 95  GFNKSVTAGIETEGVTFISPANVKLPDEVDWTKQGAVTAVKDQGHCGSCWAFSSTGALEG 154

Query: 178 INKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKND 237
            +   TG LVSLSEQ L+DC     N GCNGG M+ AF++I    G+ TE  YPY  +ND
Sbjct: 155 QHFRSTGYLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFQYIKDNKGLDTEKTYPYEAEND 214

Query: 238 RCQTDKTKHHAVTITGYEAIP-----------------------ARYAFQLYSHGV-FDE 273
           RC+ +  ++   T  GY  IP                       +  +FQLYS GV +D 
Sbjct: 215 RCRYN-PRNSGATDKGYVDIPQGDEEKLKAAVATIGPISVAIDASHESFQLYSEGVYYDP 273

Query: 274 YC-GHQLNHGVTVVGYGEDH--GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGIL 330
            C    L+HGV +VGYG D   G  YWLVKNSWG +WG+ GYI+MARN  +     CGI 
Sbjct: 274 DCSAENLDHGVLIVGYGTDETSGHDYWLVKNSWGKTWGQKGYIKMARNKNNH----CGIA 329

Query: 331 MQASYPV 337
             ASYP+
Sbjct: 330 SSASYPL 336


>gi|18202415|sp|P82474.1|CPGP2_ZINOF RecName: Full=Zingipain-2; AltName: Full=Cysteine proteinase GP-II
 gi|6137410|pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137411|pdb|1CQD|B Chain B, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137412|pdb|1CQD|C Chain C, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137413|pdb|1CQD|D Chain D, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
          Length = 221

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 108/220 (49%), Positives = 138/220 (62%), Gaps = 26/220 (11%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP S+DWR+ GAV PVK+QG CGSCWAFS VAAVEGIN++ TG L+SLSEQ+LVDC   +
Sbjct: 3   LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDC--TT 60

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP--- 258
            N GC GG+M  AF+FI   GG+ +E+ YPYRG++  C +       V+I  YE +P   
Sbjct: 61  ANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNS-TVNAPVVSIDSYENVPSHN 119

Query: 259 -------------------ARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLV 299
                              A   FQLY  G+F   C    NH +TVVGYG ++ + +W+V
Sbjct: 120 EQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIV 179

Query: 300 KNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           KNSWG +WGE+GYIR  RN  + + G CGI   ASYPVK+
Sbjct: 180 KNSWGKNWGESGYIRAERNIENPD-GKCGITRFASYPVKK 218


>gi|355567966|gb|EHH24307.1| Cathepsin L2 [Macaca mulatta]
 gi|355753494|gb|EHH57540.1| Cathepsin L2 [Macaca fascicularis]
 gi|380790509|gb|AFE67130.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 185/349 (53%), Gaps = 59/349 (16%)

Query: 30  LSLFLL-WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSS 88
           LSL L  + LGI +         K+D Q+++ ++  W   + R YG+ +E  RR  ++  
Sbjct: 3   LSLVLAAFCLGIASAV------PKFD-QNLDTKWYQWKATHRRLYGASEEGWRR-AVWEK 54

Query: 89  NVQYIDYINSQ----NLSFKLTDNKFADLSNEEFISTY-------LGYNKPYNEPRWPSV 137
           N++ I+  N +       F +  N F D++NEEF           L   K + EP     
Sbjct: 55  NMKMIELHNGEYSQGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPL---- 110

Query: 138 QYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDC 197
            +L LP SVDWRK+G VTPVK+Q QCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC
Sbjct: 111 -FLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169

Query: 198 DVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAI 257
                NQGCNGG+M  AF ++ + GG+ +E+ YPY   +  C+  + ++     TG+E +
Sbjct: 170 SHPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKY-RPENSVANDTGFEVV 228

Query: 258 PA-----------------------RYAFQLYSHGV-FDEYCGHQ-LNHGVTVVGYG--- 289
           PA                         +FQ Y  G+ F+  C  + L+HGV VVGYG   
Sbjct: 229 PAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEG 288

Query: 290 -EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
                 KYWLVKNSWG  WG  GY+++A++  +     CGI   ASYP 
Sbjct: 289 ANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNH----CGIATAASYPT 333


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 182/326 (55%), Gaps = 53/326 (16%)

Query: 52  KYDPQSMEERFENWLKQYSREYGS-EDEWQRRFGIYSSNVQYI-----DYINSQNLSFKL 105
           K+D Q+    +  W   + R YG+ E+EW+R   I+  N++ I     +Y N Q+  F +
Sbjct: 20  KFD-QTFSAEWHQWKSTHRRLYGTNEEEWRR--AIWEKNMRIIQLHNGEYSNGQH-GFSM 75

Query: 106 TDNKFADLSNEEFISTYLGYN-------KPYNEPRWPSVQYLGLPASVDWRKEGAVTPVK 158
             N F D++NEEF     GY        + + EP       L +P SVDWR++G VTPVK
Sbjct: 76  EMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPL-----MLKIPKSVDWREKGCVTPVK 130

Query: 159 DQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFI 218
           +QGQCGSCWAFSA   +EG   LKTGKL+SLSEQ LVDC     NQGCNGG M+ AF++I
Sbjct: 131 NQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYI 190

Query: 219 TKIGGVTTEDDYPYRGKNDRC------------------QTDKTKHHAVTITGYEAI--- 257
            + GG+ +E+ YPY  K+  C                  Q +K    AV   G  ++   
Sbjct: 191 KENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 258 PARYAFQLYSHGVFDE-YCGHQ-LNHGVTVVGYG----EDHGEKYWLVKNSWGTSWGEAG 311
            +  + Q YS G++ E  C  + L+HGV +VGYG    + +  KYWLVKNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 312 YIRMARNSPSSNIGICGILMQASYPV 337
           YI++A++  +     CG+   ASYPV
Sbjct: 311 YIKIAKDRDNH----CGLATAASYPV 332


>gi|387914010|gb|AFK10614.1| cathepsin L [Callorhinchus milii]
 gi|392873762|gb|AFM85713.1| cathepsin L [Callorhinchus milii]
 gi|392877488|gb|AFM87576.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 187/354 (52%), Gaps = 54/354 (15%)

Query: 23  MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRR 82
           M L   VLSL L   L  P+           DP  ++  +E W   + + Y  ++E  RR
Sbjct: 1   MRLPFVVLSLCLAGGLAAPS----------LDP-GLDTHWEQWKSWHGKSYEQKEETWRR 49

Query: 83  FGIYSSNVQYIDYINSQNL----SFKLTDNKFADLSNEEFISTYLGY-----NKPYNEPR 133
             ++  +++ I+  N ++     SF+L  N F D+ NEEF     GY     +K      
Sbjct: 50  M-VWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNEEFRQLMNGYKYKQTHKKLQGSH 108

Query: 134 WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQE 193
           +    +L +P  VDWR EG VTPVKDQGQCGSCWAFS   A+EG +  +TG+LVSLSEQ 
Sbjct: 109 FLEPNFLEVPKHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALEGQHFRRTGQLVSLSEQN 168

Query: 194 LVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITG 253
           LV+C     N+GCNGG M++AF+++   GG+ +ED YPY G +D       +++A   TG
Sbjct: 169 LVECSKPEGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTDDTPCHYNPQYNAANDTG 228

Query: 254 YEAIPA-----------------------RYAFQLYSHGV-FDEYCGH-QLNHGVTVVGY 288
           +  IP+                         +FQ Y  G+ F+  C    L+HGV VVGY
Sbjct: 229 FVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECSSTDLDHGVLVVGY 288

Query: 289 G----EDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           G    +  G+KYW+VKNSW   WG+ GYI MA++  +     CGI   ASYP++
Sbjct: 289 GVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDKDNH----CGIATAASYPLE 338


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 178/319 (55%), Gaps = 43/319 (13%)

Query: 53  YDPQSMEERFENWLKQYSREY-GSEDEWQRRFGIYSSNVQYIDYINSQNL----SFKLTD 107
           Y  + ++ ++E W K Y ++Y G  DE  RR  I+  N++YI   N +      +++L+ 
Sbjct: 17  YPEEILDTQWELWKKTYRKQYNGKVDEISRRI-IWEKNLKYISIHNLEASLGVHTYELSM 75

Query: 108 NKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQ 162
           N   D+++EE +    G   P +        Y+       P SVD+RK+G VTPVK+QGQ
Sbjct: 76  NHLGDMTSEEVVQKMTGLKVPPSHSHSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQ 135

Query: 163 CGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIG 222
           CGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ +  
Sbjct: 136 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQENR 193

Query: 223 GVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY---------- 261
           G+ +ED YPY G+ + C  + T   A    GY  IP           AR           
Sbjct: 194 GIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDAS 252

Query: 262 --AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
             +FQ YS GV +DE C G  LNH +  VGYG   G K+W++KNSWG +WG  GY+ +AR
Sbjct: 253 LSSFQFYSKGVYYDESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWGNKGYVLLAR 312

Query: 318 NSPSSNIGICGILMQASYP 336
           N  ++    CGI   AS+P
Sbjct: 313 NKNNA----CGIANLASFP 327


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 177/318 (55%), Gaps = 44/318 (13%)

Query: 55  PQSM-EERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYIN---SQNL-SFKLTDN 108
           P+ M + +++ W   Y +EY S+ DE  RR  I+  N++YI   N   S  L +F+L  N
Sbjct: 21  PEEMLDTQWKLWKDSYRKEYNSKVDEISRRL-IWEKNLKYISTHNLEFSLGLHTFELAMN 79

Query: 109 KFADLSNEEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQC 163
              D+++EE +    G   P +  +     Y        P S+D+RK+G VTPVK+QGQC
Sbjct: 80  HLGDMTSEEVVQKMTGLKVPLSRSQNNDTLYFPDWETKTPDSIDYRKKGYVTPVKNQGQC 139

Query: 164 GSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGG 223
           GSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SEN GC GGYM  AF+++ K  G
Sbjct: 140 GSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNRG 197

Query: 224 VTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP-----------ARY----------- 261
           + +ED YPY G+++ C  + T   A    GY  IP           AR            
Sbjct: 198 IDSEDAYPYIGEDESCMYNPT-GKAAKCRGYREIPEGSEKALKRAVARVGPVAVAIDASL 256

Query: 262 -AFQLYSHGV-FDEYC-GHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARN 318
            +FQ YS GV +DE C    LNH V  VGYG   G K+W++KNSWG  WG  GYI MARN
Sbjct: 257 SSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWGNKGYILMARN 316

Query: 319 SPSSNIGICGILMQASYP 336
             ++    CGI   AS+P
Sbjct: 317 KNNA----CGIANLASFP 330


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.135    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,853,929,499
Number of Sequences: 23463169
Number of extensions: 263114752
Number of successful extensions: 597166
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6764
Number of HSP's successfully gapped in prelim test: 841
Number of HSP's that attempted gapping in prelim test: 570292
Number of HSP's gapped (non-prelim): 10647
length of query: 340
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 197
effective length of database: 9,003,962,200
effective search space: 1773780553400
effective search space used: 1773780553400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)