BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041129
(106 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WG8|A Chain A, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
Length = 129
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 39 CSRTCVAENCN-SVGIRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG--LTNIK 95
CSRTC ++ C + +RYGKYCG+ +SGCP E+PCD LDAC +HD CVD N
Sbjct: 18 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 77
Query: 96 CQEKFKRCIKK 106
C E CI +
Sbjct: 78 CNENLLSCIDR 88
>pdb|2WG8|B Chain B, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
pdb|2WG8|C Chain C, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
Length = 129
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 39 CSRTCVAENCN-SVGIRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG--LTNIK 95
CSRTC ++ C + +RYGKYCG+ +SGCP E+PCD LDAC +HD CVD N
Sbjct: 18 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 77
Query: 96 CQEKFKRCIKK 106
C E CI +
Sbjct: 78 CNENLLSCIDR 88
>pdb|2WG7|A Chain A, Structure Of Oryza Sativa (Rice) Pla2
pdb|2WG7|B Chain B, Structure Of Oryza Sativa (Rice) Pla2
pdb|2WG9|A Chain A, Structure Of Oryza Sativa (Rice) Pla2, Complex With
Octanoic Acid
pdb|2WG9|B Chain B, Structure Of Oryza Sativa (Rice) Pla2, Complex With
Octanoic Acid
Length = 130
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 39 CSRTCVAENCN-SVGIRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG--LTNIK 95
CSRTC ++ C + +RYGKYCG+ +SGCP E+PCD LDAC +HD CVD N
Sbjct: 19 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 78
Query: 96 CQEKFKRCIKK 106
C E CI +
Sbjct: 79 CNENLLSCIDR 89
>pdb|1AE7|A Chain A, Notexin, A Presynaptic Neurotoxic Phospholipase A2
pdb|4E4C|A Chain A, Crystal Structure Of Notexin At 1.8 A Resolution
Length = 119
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG 90
+ YG YCG G SG P D+LD C KIHD+C D+ G
Sbjct: 23 MDYGCYCGAGGSG----TPVDELDRCCKIHDDCYDEAG 56
>pdb|3VC0|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 1
Length = 118
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
+ YG YCG G SG P DDLD C ++HDEC
Sbjct: 23 MNYGCYCGKGGSG----TPVDDLDRCCQVHDEC 51
>pdb|3GCI|A Chain A, Crystal Structure Of The Complex Formed Between A New
Isoform Of Phospholipase A2 With C-Terminal Amyloid Beta
Heptapeptide At 2 A Resolution
Length = 119
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK-CQEKFK 101
YG YCG G SG P DDLD C + HD C ++ NI C+ KFK
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE--AENISGCRPKFK 65
>pdb|1MH2|A Chain A, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD+C ++HD C +
Sbjct: 24 YGCYCGRGGSG----TPIDDLDSCCQVHDNCYNS 53
>pdb|3ELO|A Chain A, Crystal Structure Of Human Pancreatic Prophospholipase
A2
Length = 133
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG+G SG P D+LD C + HD C D+
Sbjct: 31 NYGCYCGLGGSG----TPVDELDKCCQTHDNCYDQ 61
>pdb|1P7O|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|E Chain E, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|F Chain F, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
Length = 124
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P D+LD C + HD C DK
Sbjct: 24 NYGCYCGKGGSG----TPVDELDRCCQTHDNCYDK 54
>pdb|1MKS|A Chain A, Carboxylic Ester Hydrolase, Trigonal Form Of The Triple
Mutant
pdb|1MKU|A Chain A, Carboxylic Ester Hydrolase, Orthorhombic Form Of The
Triple Mutant
Length = 123
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|2BCH|A Chain A, A Possible Of Second Calcium Ion In Interfacial Binding:
Atomic And Medium Resolution Crystal Structures Of The
Quadruple Mutant Of Phospholipase A2
pdb|2BD1|A Chain A, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
pdb|2BD1|B Chain B, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
Length = 123
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1VL9|A Chain A, Atomic Resolution (0.97a) Structure Of The Triple Mutant
(K53,56,121m) Of Bovine Pancreatic Phospholipase A2
pdb|2B96|A Chain A, Third Calcium Ion Found In An Inhibitor Bound
Phospholipase A2
Length = 123
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1O2E|A Chain A, Structure Of The Triple Mutant (K53,56,120m) + Anisic
Acid Complex Of Phospholipase A2
pdb|1O3W|A Chain A, Structure Of The Inhibitor Free Triple Mutant
(K53,56,120m) Of Phospholipase A2
pdb|1VKQ|A Chain A, A Re-Determination Of The Structure Of The Triple Mutant
(K53,56,120m) Of Phospholipase A2 At 1.6a Resolution
Using Sulphur-Sas At 1.54a Wavelength
Length = 123
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1GH4|A Chain A, Structure Of The Triple Mutant (K56m, K120m, K121m) Of
Phospholipase A2
Length = 123
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|4BP2|A Chain A, Crystallographic Refinement Of Bovine Pro-Phospholipase
A2 At 1.6 Angstroms Resolution
Length = 130
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 31 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 58
>pdb|1C74|A Chain A, Structure Of The Double Mutant (K53,56m) Of
Phospholipase A2
pdb|2BAX|A Chain A, Atomic Resolution Structure Of The Double Mutant
(K53,56m) Of Bovine Pancreatic Phospholipase A2
Length = 123
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|2BP2|A Chain A, The Structure Of Bovine Pancreatic Prophospholipase A2
At 3.0 Angstroms Resolution
Length = 130
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 31 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 58
>pdb|1CEH|A Chain A, Structure And Function Of The Catalytic Site Mutant
Asp99asn Of Phospholipase A2: Absence Of Conserved
Structural Water
Length = 123
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|2NOT|A Chain A, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
pdb|2NOT|B Chain B, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
Length = 119
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDEC---VDKKGLT 92
+ YG YCG G SG P D+LD C KIHD+C +KKG +
Sbjct: 23 MDYGCYCGWGGSG----TPVDELDRCCKIHDDCYSDAEKKGCS 61
>pdb|1KVX|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D99a Of Bovine
Pancreatic Pla2, 1.9 A Orthorhombic Form
Length = 123
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1PWO|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
Length = 124
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P D+LD C + HD C DK
Sbjct: 25 YGCYCGKGGSG----TPVDELDRCCQTHDNCYDK 54
>pdb|1IRB|A Chain A, Carboxylic Ester Hydrolase
Length = 123
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1BPQ|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1YXH|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera With A Strong Anticoagulant Activity
Length = 126
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 31 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNQ 60
>pdb|3BP2|A Chain A, Role Of The N-Terminus In The Interaction Of Pancreatic
Phospholipase A2 With Aggregated Substrates. Properties
And Crystal Structure Of Transaminated Phospholipase A2
Length = 123
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1BVM|A Chain A, Solution Nmr Structure Of Bovine Pancreatic
Phospholipase A2, 20 Structures
pdb|1G4I|A Chain A, Crystal Structure Of The Bovine Pancreatic Phospholipase
A2 At 0.97a
pdb|1BP2|A Chain A, Structure Of Bovine Pancreatic Phospholipase A2 At 1.7
Angstroms Resolution
pdb|1FDK|A Chain A, Carboxylic Ester Hydrolase (Pla2-Mj33 Inhibitor Complex)
pdb|1MKT|A Chain A, Carboxylic Ester Hydrolase, 1.72 Angstrom Trigonal Form
Of The Bovine Recombinant Pla2 Enzyme
pdb|1MKV|A Chain A, Carboxylic Ester Hydrolase Complex (Pla2 + Transition
State Analog Complex)
pdb|1UNE|A Chain A, Carboxylic Ester Hydrolase, 1.5 Angstrom Orthorhombic
Form Of The Bovine Recombinant Pla2
pdb|2BPP|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1OXR|A Chain A, Aspirin Induces Its Anti-inflammatory Effects Through
Its Specific Binding To Phospholipase A2: Crystal
Structure Of The Complex Formed Between Phospholipase
A2 And Aspirin At 1.9a Resolution
pdb|1SZ8|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 From
Naja Naja Sagittifera At 1.5 A Resolution
pdb|1TD7|A Chain A, Interactions Of A Specific Non-steroidal
Anti-inflammatory Drug (nsaid) With Group I
Phospholipase A2 (pla2): Crystal Structure Of The
Complex Formed Between Pla2 And Niflumic Acid At 2.5 A
Resolution
pdb|1YXL|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera At 1.5 A Resolution
Length = 119
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1S6B|B Chain B, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|B Chain B, Structure Of Zinc Induced Heterodimer Of Two Calcium
Free Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera At 2.7a Resolution
pdb|2RD4|B Chain B, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipase A2
With Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A
Resolution
Length = 119
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1OZY|A Chain A, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
pdb|1OZY|B Chain B, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
Length = 121
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P D+LD C + HD C DK
Sbjct: 24 NYGCYCGKGGSG----TPVDELDRCCQTHDYCYDK 54
>pdb|3V9M|A Chain A, Phospholipase Acii4 From Australian King Brown Snake
pdb|3V9M|B Chain B, Phospholipase Acii4 From Australian King Brown Snake
Length = 118
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG 90
YG YCG G SG P D+LD C ++HD C ++ G
Sbjct: 25 YGCYCGWGGSG----TPVDELDRCCQVHDNCYEQAG 56
>pdb|1HN4|A Chain A, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
pdb|1HN4|B Chain B, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
Length = 131
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLTNIK 95
YG YCG+G SG P D+LD C + HD C D K L + K
Sbjct: 31 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 69
>pdb|1FX9|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FX9|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FXF|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1FXF|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1L8S|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|1L8S|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|2AZY|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Cholate
pdb|2AZZ|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurocholate
pdb|2B00|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycocholate
pdb|2B01|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B03|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B04|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycochenodeoxycholate
pdb|1P2P|A Chain A, Structure Of Porcine Pancreatic Phospholipase A2 At 2.6
Angstroms Resolution And Comparison With Bovine
Phospholipase A2
pdb|1PIR|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1PIS|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1SFV|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, Minimized
Average Structure
pdb|1SFW|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, 18 Structures
pdb|4P2P|A Chain A, An Independent Crystallographic Refinement Of Porcine
Phospholipase A2 At 2.4 Angstroms Resolution
pdb|3HSW|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 2-Methoxycyclohexa-2-5-Diene-1,4-Dione
pdb|3L30|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Dihydroxyberberine
pdb|3FVI|A Chain A, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|B Chain B, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|C Chain C, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|D Chain D, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVJ|A Chain A, Crystal Structure Of Phospholipase A2 1b Crystallized In
The Presence Of Octyl Sulfate
pdb|3O4M|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 1,2-Dihydroxybenzene
pdb|3QLM|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With N-Hexadecanoic Acid
pdb|4DBK|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Berberine
pdb|4G5I|A Chain A, Crystal Structure Of Porcine Pancreatic Pla2 In Complex
With Dbp
Length = 124
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLTNIK 95
YG YCG+G SG P D+LD C + HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 62
>pdb|2PHI|A Chain A, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
pdb|2PHI|B Chain B, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
Length = 124
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLTNIK 95
YG YCG+G SG P D+LD C + HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 62
>pdb|2OSH|A Chain A, Crystal Structure Of Natratoxin, A Snake Spla2 That
Blocks A-Type K+ Channel
Length = 119
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|2WQ5|A Chain A, Non-Antibiotic Properties Of Tetracyclines: Structural
Basis For Inhibition Of Secretory Phospholipase A2
Length = 119
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|3P2P|A Chain A, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
pdb|3P2P|B Chain B, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
Length = 119
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLT 92
YG YCG+G SG P D+LD C + HD C D K L+
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLS 59
>pdb|1S6B|A Chain A, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|A Chain A, Structure Of Zinc Induced Heterodimer Of Two Calcium
Free Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera At 2.7a Resolution
pdb|2RD4|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipase A2
With Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A
Resolution
Length = 119
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVD 87
YG YCG G SG P DDLD C ++HD C +
Sbjct: 24 YGCYCGRGGSG----TPIDDLDRCCQVHDNCYN 52
>pdb|1MH2|B Chain B, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C + HD C ++
Sbjct: 24 YGCYCGRGGSG----TPSDDLDRCCQTHDNCYNE 53
>pdb|1POB|A Chain A, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POB|B Chain B, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POA|A Chain A, Interfacial Catalysis: The Mechanism Of Phospholipase A2
Length = 118
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1PSH|A Chain A, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|B Chain B, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|C Chain C, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1A3F|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|B Chain B, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|C Chain C, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3D|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
Length = 119
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C ++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1LN8|A Chain A, Crystal Structure Of A New Isoform Of Phospholipase A2
From Naja Naja Sagittifera At 1.6 A Resolution
pdb|1MF4|A Chain A, Structure-Based Design Of Potent And Selective
Inhibitors Of Phospholipase A2: Crystal Structure Of
The Complex Formed Between Phosholipase A2 From Naja
Naja Sagittifera And A Designed Peptide Inhibitor At
1.9 A Resolution
pdb|3JQ5|A Chain A, Phospholipase A2 Prevents The Aggregation Of Amyloid
Beta Peptides: Crystal Structure Of The Complex Of
Phospholipase A2 With Octapeptide Fragment Of Amyloid
Beta Peptide, Asp- Ala-Glu-Phe-Arg-His-Asp-Ser At 2 A
Resolution
pdb|3JQL|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And A Hexapeptide Fragment Of Amyloid
Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala At 1.2 A
Resolution
pdb|3NJU|A Chain A, Crystal Structure Of The Complex Of Group I
Phospholipase A2 With 4- Methoxy-Benzoicacid At 1.4a
Resolution
pdb|3JTI|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 With Beta-Amyloid Fragment,
Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met At 1.8 A Resolution
pdb|3OSH|A Chain A, Crystal Structure Of The Complex Of Group 1
Phospholipase A2 With Atropin At 1.5 A Resolution
pdb|3Q4Y|A Chain A, Crystal Structure Of Group I Phospholipase A2 At 2.3 A
Resolution In 40% Ethanol Revealed The Critical
Elements Of Hydrophobicity Of The Substrate-Binding
Site
Length = 119
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C + HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE 53
>pdb|1T37|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Formed Between Group I
Phospholipase A2 And A Designed Pentapeptide
Leu-Ala-Ile- Tyr-Ser At 2.6a Resolution
pdb|1ZM6|A Chain A, Crystal Structure Of The Complex Formed Beween A Group I
Phospholipase A2 And Designed Penta Peptide
Leu-ala-ile- Tyr-ser At 2.6a Resolution
Length = 119
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G SG P DDLD C + HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE 53
>pdb|1GP7|A Chain A, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|B Chain B, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|C Chain C, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
Length = 151
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG G SG P +K LD C ++HD C
Sbjct: 52 YGCYCGAGGSGTPVDK----LDRCCQVHDNC 78
>pdb|2ZP3|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + H+ C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHNNC 51
>pdb|1FE5|A Chain A, Sequence And Crystal Structure Of A Basic Phospholipase
A2 From Common Krait (Bungarus Caeruleus) At 2.4
Resolution: Identification And Characterization Of Its
Pharmacological Sites
Length = 118
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ YG YCG G SG P D+LD C HD C ++
Sbjct: 21 VNYGCYCGKGGSG----TPVDELDRCCYTHDNCYNE 52
>pdb|1KVY|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49e
Coordinated To Calcium
Length = 123
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + H+ C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHENC 51
>pdb|3VBZ|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
pdb|3VBZ|B Chain B, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
Length = 118
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
+ YG YCG G P DDLD C ++HDEC
Sbjct: 23 MNYGCYCGTVGRG----TPVDDLDRCCQVHDEC 51
>pdb|1G2X|A Chain A, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|B Chain B, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|C Chain C, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|2OSN|A Chain A, An Alternate Description Of A Crystal Structure Of
Phospholipase A2 From Bungarus Caeruleus
Length = 118
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
I YG YCG G SG P +K LD C HD C ++
Sbjct: 21 INYGCYCGKGGSGTPVDK----LDRCCYTHDHCYNQ 52
>pdb|1Y75|B Chain B, A New Form Of Catalytically Inactive Phospholipase A2
With An Unusual Disulphide Bridge Cys 32- Cys 49
Reveals Recognition For N- Acetylglucosmine
Length = 118
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG 90
YG YCG G P DDLD C ++HD C + G
Sbjct: 24 YGCYCGSG-----SGSPVDDLDRCCQVHDNCYNAGG 54
>pdb|1DPY|A Chain A, Three-Dimensional Structure Of A Novel Phospholipase A2
From Indian Common Krait At 2.45 A Resolution
Length = 118
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ YG YCG G SG P D+LD C HD C ++
Sbjct: 21 VAYGCYCGKGGSG----TPVDELDRCCYTHDHCYNE 52
>pdb|1BUN|A Chain A, Structure Of Beta2-Bungarotoxin: Potassium Channel Binding
By Kunitz Modules And Targeted Phospholipase Action
Length = 120
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDEC---VDKKGLTNIKCQEKFKRCIKK 106
YG YCG G SG +P D LD C +HD C +KK N K Q + K+
Sbjct: 25 YGCYCGAGGSG----RPIDALDRCCYVHDNCYGDAEKKHKCNPKTQSYSYKLTKR 75
>pdb|5P2P|A Chain A, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
pdb|5P2P|B Chain B, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
Length = 119
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLT 92
YG YCG G SG P D+LD C + HD C D K L+
Sbjct: 24 NYGCYCGWGGSG----TPVDELDRCCETHDNCYRDAKNLS 59
>pdb|1PO8|A Chain A, Crystal Structure Of A Complex Formed Between Krait
Venom Phospholipase A2 And Heptanoic Acid At 2.7 A
Resolution.
pdb|1TC8|A Chain A, Crystal Structure Of Krait-Venom Phospholipase A2 In A
Complex With A Natural Fatty Acid Tridecanoic Acid
Length = 118
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVD 87
YG YCG G SG P DDLD C HD C +
Sbjct: 21 TNYGCYCGKGGSG----TPVDDLDRCCYTHDHCYN 51
>pdb|1Y6O|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6O|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6P|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
pdb|1Y6P|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
Length = 131
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDECV-DKKGLTNIK 95
YG YCG+G SG P D+LD C + HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDCCYRDAKNLDSCK 62
>pdb|2ZP4|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + +D C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTNDNC 51
>pdb|2ZP5|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49k Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + H C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHKNC 51
>pdb|1KVW|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48q Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCG+G SG P DDLD C + D C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTQDNC 51
>pdb|1OWS|B Chain B, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKG 90
YG YCG G P DDLD C + HD C G
Sbjct: 24 YGCYCGSG-----SGSPTDDLDRCCQTHDNCYGAGG 54
>pdb|1OWS|A Chain A, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIKCQEKFK 101
YG YCG G SG P DDLD C ++H C + G + C+ KFK
Sbjct: 24 YGCYCGCG-SG----TPTDDLDRCCQVHCNCYRQAGEIS-GCRPKFK 64
>pdb|1Y75|A Chain A, A New Form Of Catalytically Inactive Phospholipase A2 With
An Unusual Disulphide Bridge Cys 32- Cys 49 Reveals
Recognition For N- Acetylglucosmine
Length = 118
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIKCQEKFK 101
YG YCG G SG P DDLD C ++H C + G + C+ KFK
Sbjct: 24 YGCYCGCG-SG----TPVDDLDRCCQVHCNCYRQAGEIS-GCRPKFK 64
>pdb|3V2W|A Chain A, Crystal Structure Of A Lipid G Protein-Coupled Receptor
At 3.35a
pdb|3V2Y|A Chain A, Crystal Structure Of A Lipid G Protein-Coupled Receptor
At 2.80a
Length = 520
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 12 RVISTLAFVFIIVFSESAGAINDTQVKCSRTCVAENCN-SVGIRYGKYCG 60
+ I L+++F +VF+ + G + VK R+ V++ N + +R+ Y G
Sbjct: 2 KTIIALSYIFCLVFAGAPGPTSVPLVKAHRSSVSDYVNYDIIVRHYNYTG 51
>pdb|1GMZ|A Chain A, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai.
pdb|1GMZ|B Chain B, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai
Length = 122
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ YG YCGVG G P+ D D C +HD C K
Sbjct: 22 VTYGCYCGVGGRGGPK----DATDRCCFVHDCCYGK 53
>pdb|2QOG|B Chain B, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|C Chain C, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK 95
YG YCG W G R +P D D C +HD C K N K
Sbjct: 24 YGCYCG--WGG--RGRPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|2I0U|E Chain E, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
pdb|2I0U|A Chain A, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
Length = 122
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
I YG YCG G G P+ D D C +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|1JLT|B Chain B, Vipoxin Complex
pdb|1RGB|A Chain A, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|B Chain B, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|K Chain K, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|L Chain L, Phospholipase A2 From Vipera Ammodytes Meridionalis
Length = 122
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
I YG YCG G G P+ D D C +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|3G8H|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin C From
Vipera Ammodytes Ammodytes
Length = 122
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCGVG G P+ D D C +HD C
Sbjct: 24 YGCYCGVGGKGTPK----DATDRCCFVHDCC 50
>pdb|2JF4|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With
Validoxylamine
Length = 535
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 10/28 (35%)
Query: 60 GVGWSG----------CPREKPCDDLDA 77
G GW+ CP+E+PCD++ A
Sbjct: 487 GFGWTNGVTLKXLDLICPKEQPCDNVPA 514
>pdb|2JG0|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With
1- Thiatrehazolin
pdb|2JJB|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With
Casuarine-6-O-Alpha-Glucopyranose
pdb|2JJB|B Chain B, Family 37 Trehalase From Escherichia Coli In Complex With
Casuarine-6-O-Alpha-Glucopyranose
pdb|2JJB|C Chain C, Family 37 Trehalase From Escherichia Coli In Complex With
Casuarine-6-O-Alpha-Glucopyranose
pdb|2JJB|D Chain D, Family 37 Trehalase From Escherichia Coli In Complex With
Casuarine-6-O-Alpha-Glucopyranose
pdb|2WYN|A Chain A, Structure Of Family 37 Trehalase From Escherichia Coli In
Complex With A Casuarine-6-O-A-D-Glucoside Analogue
pdb|2WYN|B Chain B, Structure Of Family 37 Trehalase From Escherichia Coli In
Complex With A Casuarine-6-O-A-D-Glucoside Analogue
pdb|2WYN|C Chain C, Structure Of Family 37 Trehalase From Escherichia Coli In
Complex With A Casuarine-6-O-A-D-Glucoside Analogue
pdb|2WYN|D Chain D, Structure Of Family 37 Trehalase From Escherichia Coli In
Complex With A Casuarine-6-O-A-D-Glucoside Analogue
Length = 535
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 10/28 (35%)
Query: 60 GVGWSG----------CPREKPCDDLDA 77
G GW+ CP+E+PCD++ A
Sbjct: 487 GFGWTNGVTLKMLDLICPKEQPCDNVPA 514
>pdb|3G8G|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin A From
Vipera Ammodytes Ammodytes
Length = 122
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
YG YCGVG G P+ D D C +HD C
Sbjct: 24 YGCYCGVGGKGTPK----DATDRCCFVHDCC 50
>pdb|1AOK|B Chain B, Vipoxin Complex
Length = 122
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
I YG YCG G G P+ D D C +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|1LE6|A Chain A, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|B Chain B, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|C Chain C, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE7|A Chain A, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
pdb|1LE7|B Chain B, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
Length = 123
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 43 CVAENCNSVGIRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
CV ++YG +CG+G G PR D +D C HD C +
Sbjct: 11 CVGPRTPIAYMKYGCFCGLGGHGQPR----DAIDWCCHGHDCCYTR 52
>pdb|2OQD|A Chain A, Crystal Structure Of Bthtx-Ii
pdb|2OQD|B Chain B, Crystal Structure Of Bthtx-Ii
pdb|3JR8|A Chain A, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
pdb|3JR8|B Chain B, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
Length = 122
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK 95
YG YCG G G P+ D D C +HD C K LTN K
Sbjct: 24 YGCYCGWGGQGQPK----DATDRCCFVHDCCYGK--LTNCK 58
>pdb|1TGM|A Chain A, Crystal Structure Of A Complex Formed Between Group Ii
Phospholipase A2 And Aspirin At 1.86 A Resolution
pdb|1TJK|A Chain A, Crystal Structure Of The Complex Formed Between Group Ii
Phospholipase A2 With A Designed Pentapeptide, Phe- Leu-
Ser- Thr- Lys At 1.2 A Resolution
Length = 121
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIKCQE-KFKR 102
YG YCG G SG P+ D D C +HD C N K K+KR
Sbjct: 24 YGCYCGWGGSGTPK----DATDRCCFVHDCCYGNLPDCNPKSDRYKYKR 68
>pdb|2QOG|A Chain A, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|D Chain D, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK 95
YG YCG G G +P D D C +HD C K N K
Sbjct: 24 YGCYCGWGGQG----RPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|1UMV|X Chain X, Crystal Structure Of An Acidic, Non-Myotoxic
Phospholipase A2 From The Venom Of Bothrops Jararacussu
pdb|1ZL7|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase
A2 With Bound Calcium
pdb|1ZLB|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase
A2 In The Absence Of Calcium
Length = 122
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ YG YCG+G G +P D D C +HD C K
Sbjct: 22 LSYGCYCGLGGQG----QPTDATDRCCFVHDCCYGK 53
>pdb|1OQS|B Chain B, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|D Chain D, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|F Chain F, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|H Chain H, Crystal Structure Of Rv4RV7 COMPLEX
Length = 122
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
I YG YCG G G P+ D D C +HD C
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCC 50
>pdb|1VIP|A Chain A, Anticoagulant Class Ii Phospholipase A2 From The Venom
Of Vipera Russelli Russelli
Length = 121
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G G KP D D C +HD C +K
Sbjct: 24 YGCYCGWGGKG----KPQDATDRCCFVHDCCYEK 53
>pdb|3R0L|D Chain D, Crystal Structure Of Crotoxin
Length = 122
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK 95
YG YCG G G +P D D C +HD C K N K
Sbjct: 24 YGCYCGWGGQG----RPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|1U73|A Chain A, Crystal Structure Of A Dimeric Acidic Platelet
Aggregation Inhibitor And Hypotensive Phospholipase A2
From Bothrops Jararacussu
pdb|1U73|B Chain B, Crystal Structure Of A Dimeric Acidic Platelet
Aggregation Inhibitor And Hypotensive Phospholipase A2
From Bothrops Jararacussu
pdb|1Z76|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
pdb|1Z76|B Chain B, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
Length = 122
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ YG YCG+G G +P D D C +HD C K
Sbjct: 22 LSYGCYCGLGGQG----QPTDATDRCCFVHDCCYGK 53
>pdb|3HD6|A Chain A, Crystal Structure Of The Human Rhesus Glycoprotein Rhcg
Length = 490
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1 MLLGAFV-PFRTRVISTLAFVFIIVFSESAGAINDT 35
M GA + F +ISTL FV++ F ES I DT
Sbjct: 307 MPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDT 342
>pdb|2H4C|B Chain B, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|D Chain D, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|F Chain F, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|H Chain H, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
Length = 122
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGCPREKPCDDLDACYKIHDEC 85
I YG YCG G G P+ D D C +HD C
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCC 50
>pdb|1MH8|A Chain A, Crystal Structure Of A Phopholipase A2 Monomer With
Isoleucine At Second Position
Length = 119
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 71 PCDDLDACYKIHDECVDK 88
P DDLD C ++HD C ++
Sbjct: 36 PTDDLDRCCQVHDNCYNQ 53
>pdb|1MH7|A Chain A, Crystal Structure Of A Calcium-Free Isoform Of
Phospholipase A2 From Naja Naja Sagittifera At 2.0 A
Resolution
Length = 119
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 71 PCDDLDACYKIHDECVDK 88
P DDLD C ++HD C ++
Sbjct: 36 PTDDLDRCCQVHDNCYNQ 53
>pdb|1N29|A Chain A, Crystal Structure Of The N1a Mutant Of Human Group Iia
Phospholipase A2
Length = 124
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIKCQEKF 100
YG +CGVG G P+ D D C HD C K L C KF
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTHDCCY--KRLEKRGCGTKF 63
>pdb|1POE|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1POE|B Chain B, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1AYP|A Chain A, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|B Chain B, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|C Chain C, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|D Chain D, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|E Chain E, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|F Chain F, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1KVO|A Chain A, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|B Chain B, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|C Chain C, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|D Chain D, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|E Chain E, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|F Chain F, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1DCY|A Chain A, Crystal Structure Of Human S-Pla2 In Complex With Indole 3
Active Site Inhibitor
pdb|1DB4|A Chain A, Human S-Pla2 In Complex With Indole 8
pdb|1DB5|A Chain A, Human S-Pla2 In Complex With Indole 6
pdb|1J1A|A Chain A, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1J1A|B Chain B, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1KQU|A Chain A, Human Phospholipase A2 Complexed With A Substrate Anologue
pdb|1BBC|A Chain A, Structure Of Recombinant Human Rheumatoid Arthritic
Synovial Fluid Phospholipase A2 At 2.2 Angstroms
Resolution
pdb|1POD|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|3U8B|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
Length = 124
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIKCQEKF 100
YG +CGVG G P+ D D C HD C K L C KF
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTHDCCY--KRLEKRGCGTKF 63
>pdb|4H0S|A Chain A, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|B Chain B, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|C Chain C, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
Length = 137
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 53 IRYGKY-CGVGWSGCPREKPCDDLDACYKIHDECVDK 88
+ Y KY C G +G R KP D D C IH+ C K
Sbjct: 35 LSYSKYGCNCGMAG--RGKPVDATDTCCSIHNCCYGK 69
>pdb|1JIA|A Chain A, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1JIA|B Chain B, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1B4W|A Chain A, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|B Chain B, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|C Chain C, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|D Chain D, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
Length = 122
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDK 88
YG YCG G G KP D D C +HD C +K
Sbjct: 24 YGCYCGSGGRG----KPKDATDRCCFVHDCCYEK 53
>pdb|1PP2|R Chain R, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
pdb|1PP2|L Chain L, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
Length = 122
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGCPREKPCDDLDACYKIHDECVDKKGLTNIK 95
YG YCG G G P+ D D C +HD C K N K
Sbjct: 24 YGCYCGWGGHGLPQ----DATDRCCFVHDCCYGKATDCNPK 60
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.141 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,940,974
Number of Sequences: 62578
Number of extensions: 106836
Number of successful extensions: 403
Number of sequences better than 100.0: 123
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 269
Number of HSP's gapped (non-prelim): 123
length of query: 106
length of database: 14,973,337
effective HSP length: 71
effective length of query: 35
effective length of database: 10,530,299
effective search space: 368560465
effective search space used: 368560465
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 45 (21.9 bits)