Query 041132
Match_columns 370
No_of_seqs 174 out of 1290
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:20:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 9.3E-80 3.2E-84 598.0 29.8 328 16-351 5-346 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 8.2E-75 2.8E-79 555.1 24.2 298 48-363 2-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.8E-74 1.6E-78 549.1 25.1 295 47-347 4-306 (312)
4 1odm_A Isopenicillin N synthas 100.0 1.7E-70 5.9E-75 528.4 26.5 288 47-348 6-322 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.3E-69 4.6E-74 517.7 19.4 271 48-345 3-300 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 2.4E-64 8.1E-69 474.5 21.4 255 48-345 2-272 (280)
7 3dkq_A PKHD-type hydroxylase S 95.6 0.031 1.1E-06 50.5 7.8 80 215-312 98-194 (243)
8 2rg4_A Uncharacterized protein 94.0 0.89 3E-05 40.0 13.0 80 218-315 105-209 (216)
9 3itq_A Prolyl 4-hydroxylase, a 88.7 0.88 3E-05 40.0 6.7 103 191-312 94-211 (216)
10 2jig_A Prolyl-4 hydroxylase; h 88.2 1.2 4E-05 39.2 7.3 87 217-313 99-217 (224)
11 2hbt_A EGL nine homolog 1; pro 88.1 1.3 4.4E-05 39.8 7.6 79 218-312 119-212 (247)
12 3s57_A Alpha-ketoglutarate-dep 86.0 2 7E-05 37.3 7.5 83 216-310 100-200 (204)
13 2iuw_A Alkylated repair protei 83.6 4.6 0.00016 35.9 8.8 85 216-312 126-229 (238)
14 3i3q_A Alpha-ketoglutarate-dep 65.0 15 0.0005 32.0 6.7 81 216-312 105-202 (211)
15 3tht_A Alkylated DNA repair pr 58.4 17 0.00059 34.1 6.4 96 214-316 196-316 (345)
16 3o2g_A Gamma-butyrobetaine dio 47.0 7.2 0.00025 37.2 1.8 52 49-108 122-173 (388)
17 2dbn_A Hypothetical protein YB 46.5 8.3 0.00028 37.6 2.1 54 48-108 99-152 (461)
18 3rcq_A Aspartyl/asparaginyl be 36.2 56 0.0019 27.9 5.6 66 234-315 114-186 (197)
19 1m5a_B Insulin B chain; alpha 33.6 40 0.0014 19.6 2.8 17 68-84 10-26 (30)
20 1otj_A Alpha-ketoglutarate-dep 29.6 48 0.0016 29.5 4.3 50 48-106 16-65 (283)
21 1otf_A 4-oxalocrotonate tautom 29.0 36 0.0012 22.3 2.6 29 51-79 1-29 (62)
22 1e5r_A Proline oxidase; oxidor 28.7 43 0.0015 30.5 3.7 62 235-311 104-175 (290)
23 2opa_A Probable tautomerase YW 27.4 40 0.0014 22.0 2.6 29 51-79 1-29 (61)
24 4ay7_A Methylcobalamin\: coenz 27.1 88 0.003 28.8 5.8 47 58-107 298-348 (348)
25 3kt7_A PKHD-type hydroxylase T 26.5 1.4E+02 0.0047 30.2 7.2 104 191-315 105-231 (633)
26 2opi_A L-fuculose-1-phosphate 26.1 33 0.0011 29.4 2.4 37 49-91 125-161 (212)
27 3m20_A 4-oxalocrotonate tautom 25.1 69 0.0024 21.3 3.5 28 51-79 1-28 (62)
28 1oih_A Putative alkylsulfatase 24.1 70 0.0024 28.8 4.4 52 48-108 26-78 (301)
29 2da7_A Zinc finger homeobox pr 23.7 38 0.0013 24.0 1.8 40 172-211 14-53 (71)
30 3ry0_A Putative tautomerase; o 22.4 56 0.0019 21.9 2.6 29 51-79 1-29 (65)
31 2x4k_A 4-oxalocrotonate tautom 22.2 57 0.002 21.2 2.6 29 51-79 4-32 (63)
32 3nrl_A Uncharacterized protein 22.2 20 0.00068 26.0 0.1 19 275-293 31-49 (81)
33 3ghf_A Septum site-determining 21.9 82 0.0028 24.5 3.8 36 52-93 51-86 (120)
34 1e4c_P L-fuculose 1-phosphate 21.6 46 0.0016 28.6 2.4 37 49-91 122-158 (215)
35 3jsy_A Acidic ribosomal protei 21.3 1.6E+02 0.0056 25.2 5.9 41 64-104 3-44 (213)
36 1gyx_A YDCE, B1461, hypothetic 20.7 77 0.0026 22.1 3.1 29 51-79 1-30 (76)
37 2irp_A Putative aldolase class 20.4 37 0.0012 29.0 1.5 37 48-91 138-177 (208)
38 2fk5_A Fuculose-1-phosphate al 20.1 57 0.0019 27.7 2.7 36 49-90 117-153 (200)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=9.3e-80 Score=597.98 Aligned_cols=328 Identities=27% Similarity=0.435 Sum_probs=293.4
Q ss_pred hhHhHHHhhcCCCCCCCCCCCCCCCCCCCC----C----CCCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEe
Q 041132 16 LVFDASVLQFQSTIPSQFIWPDGEKPSLEL----P----ELVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVN 87 (370)
Q Consensus 16 ~~~~~~~~~~~~~vp~~~~~p~~~~~~~~~----~----~~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~n 87 (370)
.+|++++++++.+||++|++|+++++.... . ..+||||||+.+.++|+++|.+++++|.+||++||||||+|
T Consensus 5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n 84 (356)
T 1gp6_A 5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN 84 (356)
T ss_dssp CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 358999999999999999999887776321 1 24699999999987787788899999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccC--CCCccccCCCCCCcCCCCCcccccccccccCCCCCchhhhhhhcc
Q 041132 88 HGVDSMLIKKAHKYMDSFFATQLSKKQKAQRKI--GDHCGYSSSFTGRFSNKLPWKETLTFRYRANDENSSTVVEDYFFN 165 (370)
Q Consensus 88 hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~p~~~~~~~~~~~p~~ 165 (370)
|||+.++++++++.+++||+||.|+|+++.... ..++||.........+..||+|.|.++.. |... ...+.||..
T Consensus 85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~-p~~~--~~~~~wP~~ 161 (356)
T 1gp6_A 85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAY-PEEK--RDLSIWPKT 161 (356)
T ss_dssp CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEE-SGGG--CCGGGSCCS
T ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecC-Cccc--cccccCCCc
Confidence 999999999999999999999999999998754 35889988766555678899999998765 4321 224566653
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHhhhc---CCceeEEEeccCCCCCCCCCCccccccCCC
Q 041132 166 VMGQDFRQFGKVYQEYCEAMSSLSLGIMELLGMSLGVGRAHFREFFQ---GHDSIMRLNYYPPCQKPNLTLGTGPHCDPT 242 (370)
Q Consensus 166 ~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~ 242 (370)
++.||+.+.+|+++|.+++..||++|+++||+++++|.+.+. .+.+.||++|||||+.++..+|+++|||+|
T Consensus 162 -----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g 236 (356)
T 1gp6_A 162 -----PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVS 236 (356)
T ss_dssp -----STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCS
T ss_pred -----chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCC
Confidence 478999999999999999999999999999999999999887 477889999999999988899999999999
Q ss_pred ceEEEecCCCCCeeeeeCCeeEEccCCCCeEEEEeccchhhccCCeeccccccCCCCCCCceEEEEEecCCCCCc-eEeC
Q 041132 243 SLTILHQDQVGGLQVYVDEQWQSVSPNPDAFVVNIGDTFMALSNGIYKSCLHRAAVNNTTVRKSLAFFLCPKMDK-VVTP 321 (370)
Q Consensus 243 ~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~le~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p 321 (370)
+||||+||.++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||++++.++|||++||++|+.|+ +|+|
T Consensus 237 ~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~p 316 (356)
T 1gp6_A 237 ALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKP 316 (356)
T ss_dssp SEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECC
T ss_pred eEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeC
Confidence 999999999999999999999999999999999999999999999999999999998888999999999999999 9999
Q ss_pred CCCCcCCCCCCCCCCcCHHHHHHHHHHhhh
Q 041132 322 PNNLVNANNPRIYPDFTWHNLLHFTQNYFR 351 (370)
Q Consensus 322 ~~~~v~~~~p~~y~~~~~~ey~~~~~~~~~ 351 (370)
+++++++++|++|+++|++||+........
T Consensus 317 l~~~~~~~~p~~y~~~t~~eyl~~~~~~~~ 346 (356)
T 1gp6_A 317 LPEMVSVESPAKFPPRTFAQHIEHKLFGKE 346 (356)
T ss_dssp CGGGCCSSSCCSSCCEEHHHHHHHHHHHHH
T ss_pred ChhhcCCCCCccCCCccHHHHHHHHHHhcc
Confidence 999999999999999999999986444333
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.2e-75 Score=555.08 Aligned_cols=298 Identities=26% Similarity=0.471 Sum_probs=258.9
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCCcccc
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFATQLSKKQKAQRKIGDHCGYS 127 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~GY~ 127 (370)
.+||||||+.+. ++++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l~---~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKVN---GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALE 75 (319)
T ss_dssp CCCCEEEGGGGG---STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHT
T ss_pred CCCCEEECcccC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCC
Confidence 369999999885 235778999999999999999999999999999999999999999999999998654 34887
Q ss_pred CCCCCCcCCCCCcccccccccccCCCCCchhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHH
Q 041132 128 SSFTGRFSNKLPWKETLTFRYRANDENSSTVVEDYFFNVMGQDFRQFGKVYQEYCEAMSSLSLGIMELLGMSLGVGRAHF 207 (370)
Q Consensus 128 ~~~~~~~~~~~d~~E~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~ 207 (370)
+...+ .+..||+|.|.++.. |.. ..+.||.. ++.||+.+.+|+++|.+++..||++|+++||+++++|
T Consensus 76 ~~~~e--~~~~d~ke~~~~~~~-p~~----~~~~wP~~-----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 143 (319)
T 1w9y_A 76 GVQAE--VTDMDWESTFFLKHL-PIS----NISEVPDL-----DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYL 143 (319)
T ss_dssp TCCCC--GGGCCCCEEEEEEEE-SCC----GGGGCTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHH
T ss_pred ccccc--CCCCChhhheeeecC-Ccc----cccccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 65433 467899999998764 532 24667754 3899999999999999999999999999999999999
Q ss_pred HhhhcC---CceeEEEeccCCCCCCCCCCccccccCCCceEEEecC-CCCCeeeeeCCeeEEccCCCCeEEEEeccchhh
Q 041132 208 REFFQG---HDSIMRLNYYPPCQKPNLTLGTGPHCDPTSLTILHQD-QVGGLQVYVDEQWQSVSPNPDAFVVNIGDTFMA 283 (370)
Q Consensus 208 ~~~~~~---~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~le~ 283 (370)
.+.+.. ..+.||++|||||++++..+|+++|||+|+||||+|| .++||||+++|+|++|+|.||++|||+||+||+
T Consensus 144 ~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 144 KNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEV 223 (319)
T ss_dssp HHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHH
T ss_pred HHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHH
Confidence 998863 5578999999999998889999999999999999995 799999999999999999999999999999999
Q ss_pred ccCCeeccccccCCCCCCCceEEEEEecCCCCCceEeCCCCCcCCC---CCCCCCCcCHHHHHHHHHHhhhhhhhh-HHH
Q 041132 284 LSNGIYKSCLHRAAVNNTTVRKSLAFFLCPKMDKVVTPPNNLVNAN---NPRIYPDFTWHNLLHFTQNYFRADVKT-LNA 359 (370)
Q Consensus 284 ~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-~~~ 359 (370)
||||+|||+.|||++++.++|+|++||+.|+.|++|+|++++++++ +|++|+++|++||+....+.+..++.. ++.
T Consensus 224 ~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~ 303 (319)
T 1w9y_A 224 ITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEA 303 (319)
T ss_dssp HTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHH
T ss_pred HhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHH
Confidence 9999999999999999888999999999999999999999999988 599999999999998765555555443 555
Q ss_pred HHHH
Q 041132 360 FSAW 363 (370)
Q Consensus 360 ~~~~ 363 (370)
+++.
T Consensus 304 ~~~~ 307 (319)
T 1w9y_A 304 MKAM 307 (319)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 5543
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.8e-74 Score=549.05 Aligned_cols=295 Identities=24% Similarity=0.361 Sum_probs=256.9
Q ss_pred CCCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCCccc
Q 041132 47 ELVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFATQLSKKQKAQRKIGDHCGY 126 (370)
Q Consensus 47 ~~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~GY 126 (370)
..+||||||+.+.+ .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||
T Consensus 4 ~~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy 79 (312)
T 3oox_A 4 TSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGY 79 (312)
T ss_dssp CCSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEE
T ss_pred CCCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccc
Confidence 35799999998742 46688999999999999999999999999999999999999999999999997754457899
Q ss_pred cCCCCCCc--CCCCCcccccccccccCCCCCchhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 041132 127 SSSFTGRF--SNKLPWKETLTFRYRANDENSSTVVEDYFFNVMGQDFRQFGKVYQEYCEAMSSLSLGIMELLGMSLGVGR 204 (370)
Q Consensus 127 ~~~~~~~~--~~~~d~~E~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~ 204 (370)
.+.+.+.. .+..||+|+|.++...+... ......+.+.||+.++.||+.+.+|+++|.+++..||++|+++||+++
T Consensus 80 ~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~--~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 157 (312)
T 3oox_A 80 IPFGVETAKGADHYDLKEFWHMGRDLPPGH--RFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 157 (312)
T ss_dssp ECCCCCCSTTSCSCCCCEEEEECCCCCTTC--GGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred ccccceecCCCCCCCceeeeEeecCCCcCC--cchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 77665533 35689999998865323221 111223445566666899999999999999999999999999999999
Q ss_pred hHHHhhhcCCceeEEEeccCCCCCCCCCCccccccCCCceEEEecCCCCCeeee-eCCeeEEccCCCCeEEEEeccchhh
Q 041132 205 AHFREFFQGHDSIMRLNYYPPCQKPNLTLGTGPHCDPTSLTILHQDQVGGLQVY-VDEQWQSVSPNPDAFVVNIGDTFMA 283 (370)
Q Consensus 205 ~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvVnvGd~le~ 283 (370)
++|.+.+..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+
T Consensus 158 ~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 158 DFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp TTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred HHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence 999999988889999999999998655599999999999999999999999996 6899999999999999999999999
Q ss_pred ccCCeeccccccCCCCC----CCceEEEEEecCCCCCceEeCCCCCcCCCCCCCCC-CcCHHHHHHHHH
Q 041132 284 LSNGIYKSCLHRAAVNN----TTVRKSLAFFLCPKMDKVVTPPNNLVNANNPRIYP-DFTWHNLLHFTQ 347 (370)
Q Consensus 284 ~TnG~~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~-~~~~~ey~~~~~ 347 (370)
||||+|||+.|||+.++ ..+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||+....
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~ 306 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRL 306 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHH
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHH
Confidence 99999999999998653 46799999999999999999999999999999999 999999998533
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.7e-70 Score=528.38 Aligned_cols=288 Identities=20% Similarity=0.315 Sum_probs=252.5
Q ss_pred CCCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHh-hcCCHHHHHHhhccCCCCcc
Q 041132 47 ELVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSF-FATQLSKKQKAQRKIGDHCG 125 (370)
Q Consensus 47 ~~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~G 125 (370)
..+||||||+.|.++|+++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +|
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~G 77 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RA 77 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cC
Confidence 35799999999988788888999999999999999999999999 999999999999 9999999999965 68
Q ss_pred ccCCCCCCc--C------CCCCcccccccccccCCCCC-------chhhhhhhccccCchhHHHHHHHHHHHHHHHHHHH
Q 041132 126 YSSSFTGRF--S------NKLPWKETLTFRYRANDENS-------STVVEDYFFNVMGQDFRQFGKVYQEYCEAMSSLSL 190 (370)
Q Consensus 126 Y~~~~~~~~--~------~~~d~~E~~~~~~~~p~~~~-------~~~~~~~p~~~~~~~~~~fr~~~~~y~~~~~~l~~ 190 (370)
|.+.+.+.. + +..||+|+|+++...+.+.+ ....+.||.. +.++.||+.+.+|+++|.+++.
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~---~~~p~fr~~~~~y~~~~~~l~~ 154 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDE---TKHPGFQDFAEQYYWDVFGLSS 154 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCT---TTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCC---CCChHHHHHHHHHHHHHHHHHH
Confidence 876554432 1 57899999998754222110 0113445432 0158999999999999999999
Q ss_pred HHHHHHHHhcCCChhHHHhhhcCCceeEE--EeccC------C---CCCCCC-CCccccccCCCceEEEecCCCCCeeee
Q 041132 191 GIMELLGMSLGVGRAHFREFFQGHDSIMR--LNYYP------P---CQKPNL-TLGTGPHCDPTSLTILHQDQVGGLQVY 258 (370)
Q Consensus 191 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr--~~~Yp------p---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqV~ 258 (370)
.||++|+++||+++++|.+.++.+.+.|| ++||| | |++++. .+|+++|||+|+||||+||.++||||+
T Consensus 155 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 234 (331)
T 1odm_A 155 ALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVE 234 (331)
T ss_dssp HHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEE
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEE
Confidence 99999999999999999999988889999 99999 7 777776 899999999999999999999999999
Q ss_pred -eCCeeEEccCCCCeEEEEeccchhhccCCeeccccccCCCCCCCceEEEEEecCCCCCceEeCCCCCcCCCCCCCCCCc
Q 041132 259 -VDEQWQSVSPNPDAFVVNIGDTFMALSNGIYKSCLHRAAVNNTTVRKSLAFFLCPKMDKVVTPPNNLVNANNPRIYPDF 337 (370)
Q Consensus 259 -~~g~W~~V~p~pg~lvVnvGd~le~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~ 337 (370)
++| |++|+|.||++|||+||+||+||||+|||+.|||+. +.++|||++||+.|+.|++|+|+++++++++ ++|+++
T Consensus 235 ~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~ 311 (331)
T 1odm_A 235 TAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPL 311 (331)
T ss_dssp ETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCC
T ss_pred cCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCc
Confidence 678 999999999999999999999999999999999985 4789999999999999999999999999888 999999
Q ss_pred CHHHHHHHHHH
Q 041132 338 TWHNLLHFTQN 348 (370)
Q Consensus 338 ~~~ey~~~~~~ 348 (370)
|++||++...+
T Consensus 312 t~~e~l~~~~~ 322 (331)
T 1odm_A 312 SYGDYLQNGLV 322 (331)
T ss_dssp BHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999986444
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.3e-69 Score=517.72 Aligned_cols=271 Identities=18% Similarity=0.279 Sum_probs=231.4
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcCC-HHHHHHhhccC-CCCcc
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFATQ-LSKKQKAQRKI-GDHCG 125 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~-~~~~G 125 (370)
.+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ...+|
T Consensus 3 ~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 47999999988654432 289999999999999999999999999999999999999 99999998753 45799
Q ss_pred ccCCCCCCc------CCCCCcccccccccccCCCCCchhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041132 126 YSSSFTGRF------SNKLPWKETLTFRYRANDENSSTVVEDYFFNVMGQDFRQFGKVYQEYCEAMSSLSLGIMELLGMS 199 (370)
Q Consensus 126 Y~~~~~~~~------~~~~d~~E~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~ 199 (370)
|.+.+.+.. .+..||+|+|.++.. .+.|| ++.||+.+.+|+++|.+++..||++|+++
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~---------~n~wP-------~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 140 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA---------DNLFP-------SGDFERIWTQYFDRQYTASRAVAREVLRA 140 (311)
T ss_dssp EEEC-----------------CEEEEECSS---------SCCCS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC---------CCCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987765532 467899999988643 24576 38999999999999999999999999999
Q ss_pred cCC----ChhHHHhhhcCCceeEEEeccCCCCCCC--C--CCccccccCCCceEEEecC-CCCC---eeeeeCCeeEEcc
Q 041132 200 LGV----GRAHFREFFQGHDSIMRLNYYPPCQKPN--L--TLGTGPHCDPTSLTILHQD-QVGG---LQVYVDEQWQSVS 267 (370)
Q Consensus 200 Lgl----~~~~~~~~~~~~~~~lr~~~Ypp~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---LqV~~~g~W~~V~ 267 (370)
||+ ++++|.+. .+.||++|||||+.++ . .+|+++|||+|+||||+|| .++| |||+++|+|++|+
T Consensus 141 Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~ 216 (311)
T 1dcs_A 141 TGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLP 216 (311)
T ss_dssp TTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECC
T ss_pred cCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCc
Confidence 999 88888765 6789999999998863 3 6789999999999999998 8999 9999999999999
Q ss_pred CCCCeEEEEeccchhhccCCeeccccccCCCCC-----CCceEEEEEecCCCCCceEeCCCCCcCCCCCCCC--CCcCHH
Q 041132 268 PNPDAFVVNIGDTFMALSNGIYKSCLHRAAVNN-----TTVRKSLAFFLCPKMDKVVTPPNNLVNANNPRIY--PDFTWH 340 (370)
Q Consensus 268 p~pg~lvVnvGd~le~~TnG~~kS~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y--~~~~~~ 340 (370)
|+||++|||+||+||+||||+|||+.|||+.++ .++|||++||+.|+.|++|. +++++++++|++| +++|++
T Consensus 217 p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ 295 (311)
T 1dcs_A 217 YRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQ 295 (311)
T ss_dssp CCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHH
T ss_pred CCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHH
Confidence 999999999999999999999999999999887 67899999999999999999 9999999999999 999999
Q ss_pred HHHHH
Q 041132 341 NLLHF 345 (370)
Q Consensus 341 ey~~~ 345 (370)
||+..
T Consensus 296 ey~~~ 300 (311)
T 1dcs_A 296 DWIGG 300 (311)
T ss_dssp HHHCS
T ss_pred HHHHH
Confidence 99874
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.4e-64 Score=474.54 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=216.4
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcCCHHHHHHhhccCCCCcccc
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFATQLSKKQKAQRKIGDHCGYS 127 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~GY~ 127 (370)
++||||||++. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++....+..+||.
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFF 70 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccc
Confidence 57999999963 23568999999999999999999999999999999999998 78999877656689998
Q ss_pred CCC-CCCc--CCCCCcccccccccccCCCCCchhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 041132 128 SSF-TGRF--SNKLPWKETLTFRYRANDENSSTVVEDYFFNVMGQDFRQFGKVYQEYCEAMSSLSLGIMELLGMSLGVGR 204 (370)
Q Consensus 128 ~~~-~~~~--~~~~d~~E~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~ 204 (370)
+.. .+.. ....||+|.|.+. | ||.. ++.||+.+.+|+++|.+++..||++|+++||++.
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~~~---p----------~~~~-----p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 132 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYHVY---P----------WGRI-----PDSLRANILAYYEKANTLASELLEWIETYSPDEI 132 (280)
T ss_dssp CCC--------CCCCSCEEEEEC---T----------TSCC-----CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred cCccccccCCCCcccHHHHHhcC---C----------CCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 765 3322 2467999988652 1 3322 2689999999999999999999999999999763
Q ss_pred --hH---HHhhhcCCc-eeEEEeccCCCCCCC--CCCccccccCCCceEEEecCCCCCeeee-eCCeeEEccCCCCeEEE
Q 041132 205 --AH---FREFFQGHD-SIMRLNYYPPCQKPN--LTLGTGPHCDPTSLTILHQDQVGGLQVY-VDEQWQSVSPNPDAFVV 275 (370)
Q Consensus 205 --~~---~~~~~~~~~-~~lr~~~Ypp~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvV 275 (370)
++ |.+.+..+. +.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++||
T Consensus 133 ~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vV 212 (280)
T 3on7_A 133 KAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIII 212 (280)
T ss_dssp HTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEE
T ss_pred hhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEE
Confidence 22 556665554 889999999999754 4789999999999999999999999998 68999999999999999
Q ss_pred EeccchhhccCCeeccccccCCCCC----CCceEEEEEecCCCCCceEeCCCCCcCCCCCCCCCCcCHHHHHHH
Q 041132 276 NIGDTFMALSNGIYKSCLHRAAVNN----TTVRKSLAFFLCPKMDKVVTPPNNLVNANNPRIYPDFTWHNLLHF 345 (370)
Q Consensus 276 nvGd~le~~TnG~~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~ey~~~ 345 (370)
|+||+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|+| ++|++||++.
T Consensus 213 NiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~ 272 (280)
T 3on7_A 213 NIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLME 272 (280)
T ss_dssp EECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHH
T ss_pred EcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHH
Confidence 9999999999999999999998763 468999999999999999974 5899999885
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.59 E-value=0.031 Score=50.46 Aligned_cols=80 Identities=21% Similarity=0.151 Sum_probs=54.8
Q ss_pred ceeEEEeccCCCCCCCCCCccccccCCC-----------ceEEEec--C----CCCCeeeeeCCeeEEccCCCCeEEEEe
Q 041132 215 DSIMRLNYYPPCQKPNLTLGTGPHCDPT-----------SLTILHQ--D----QVGGLQVYVDEQWQSVSPNPDAFVVNI 277 (370)
Q Consensus 215 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~~~GLqV~~~g~W~~V~p~pg~lvVnv 277 (370)
..-+++++|.+-.. ..+|.|.. .+|+++. | ..|.|.+.....=..|+|..|.+|+.-
T Consensus 98 ~e~~~~~rY~~G~~------y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 98 FYPPLFNRYQGGET------FGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEEECTTCE------EEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEE
T ss_pred cccceEEEECCCCe------eccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEEC
Confidence 34588999977432 67777753 4666654 3 234566666544578999999999864
Q ss_pred ccchhhccCCeeccccccCCCCCCCceEEEEEecC
Q 041132 278 GDTFMALSNGIYKSCLHRAAVNNTTVRKSLAFFLC 312 (370)
Q Consensus 278 Gd~le~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~ 312 (370)
. .++|+|..-....|++++.++.
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 3 3689996544568999998876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.04 E-value=0.89 Score=39.96 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=51.4
Q ss_pred EEEeccCCCCCCCCCCccccccCC-CceEEEec----CCCCCeeeeeC-------------------CeeEEccCCCCeE
Q 041132 218 MRLNYYPPCQKPNLTLGTGPHCDP-TSLTILHQ----DQVGGLQVYVD-------------------EQWQSVSPNPDAF 273 (370)
Q Consensus 218 lr~~~Ypp~~~~~~~~g~~~HtD~-~~lTlL~q----d~~~GLqV~~~-------------------g~W~~V~p~pg~l 273 (370)
+-++.|++..- ...|.|. +.|+-.+. ++.|.|.+.+. ..+..|.|.+|.+
T Consensus 105 ~W~~~~~~G~~------~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~l 178 (216)
T 2rg4_A 105 IWINILPEGGV------HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDV 178 (216)
T ss_dssp EEEEEECTTCC------EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEE
T ss_pred EEEEEcCCCCc------ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeE
Confidence 45667765332 4556665 35554432 23455666532 3567899999999
Q ss_pred EEEeccchhhccCCeeccccccCCCCC-CCceEEEEEecCCCC
Q 041132 274 VVNIGDTFMALSNGIYKSCLHRAAVNN-TTVRKSLAFFLCPKM 315 (370)
Q Consensus 274 vVnvGd~le~~TnG~~kS~~HRV~~~~-~~~R~Si~~F~~P~~ 315 (370)
||.-+. ..|.|..+. +++|+||+|-+.+..
T Consensus 179 vlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 179 LLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp EEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred EEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 988764 379997654 468999999988764
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=88.66 E-value=0.88 Score=40.04 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=60.5
Q ss_pred HHHHHHHHhcCCChhHHHhhhcCCceeEEEeccCCCCCCCCCCccccccCCC-----------ceEEEec--C-CCCCee
Q 041132 191 GIMELLGMSLGVGRAHFREFFQGHDSIMRLNYYPPCQKPNLTLGTGPHCDPT-----------SLTILHQ--D-QVGGLQ 256 (370)
Q Consensus 191 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~~~GLq 256 (370)
+|.+.++..+|++... ..-+++.+|.+... ..+|.|.. .+|+++. | ..||=-
T Consensus 94 ~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 3444444556776321 22478888876433 56777753 4787775 2 233422
Q ss_pred eeeCCeeEEccCCCCeEEEEeccchhhccCCe-eccccccCCCCCCCceEEEEEecC
Q 041132 257 VYVDEQWQSVSPNPDAFVVNIGDTFMALSNGI-YKSCLHRAAVNNTTVRKSLAFFLC 312 (370)
Q Consensus 257 V~~~g~W~~V~p~pg~lvVnvGd~le~~TnG~-~kS~~HRV~~~~~~~R~Si~~F~~ 312 (370)
+..+. =+.|.|..|.+++.-.- ..+|. -..++|+|..-....|+++..+++
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred EecCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 32221 27889999998876541 11232 246799996544468999988765
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.21 E-value=1.2 Score=39.16 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=53.8
Q ss_pred eEEEeccCCCCCCCCCCccccccCC--------------CceEEEec--C-CCCC-eeeeeCC-------------eeEE
Q 041132 217 IMRLNYYPPCQKPNLTLGTGPHCDP--------------TSLTILHQ--D-QVGG-LQVYVDE-------------QWQS 265 (370)
Q Consensus 217 ~lr~~~Ypp~~~~~~~~g~~~HtD~--------------~~lTlL~q--d-~~~G-LqV~~~g-------------~W~~ 265 (370)
-+++++|.+... ..+|.|. ..+|+|+. | ..|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~~------y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQK------YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTCC------EEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCcc------ccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 377888876332 4566664 25788864 3 2333 4443211 2478
Q ss_pred ccCCCCeEEEEeccchhhccCCee-ccccccCCCCCCCceEEEEEecCC
Q 041132 266 VSPNPDAFVVNIGDTFMALSNGIY-KSCLHRAAVNNTTVRKSLAFFLCP 313 (370)
Q Consensus 266 V~p~pg~lvVnvGd~le~~TnG~~-kS~~HRV~~~~~~~R~Si~~F~~P 313 (370)
|.|..|.+|+.-- ...+|.. ..++|+|..-...+|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999887653 1123432 578999965445689999888763
No 11
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.13 E-value=1.3 Score=39.77 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=54.4
Q ss_pred EEEeccCCCCCCCCCCccccccCC-----CceEEEec--C------CCCCeeeeeCC--eeEEccCCCCeEEEEeccchh
Q 041132 218 MRLNYYPPCQKPNLTLGTGPHCDP-----TSLTILHQ--D------QVGGLQVYVDE--QWQSVSPNPDAFVVNIGDTFM 282 (370)
Q Consensus 218 lr~~~Ypp~~~~~~~~g~~~HtD~-----~~lTlL~q--d------~~~GLqV~~~g--~W~~V~p~pg~lvVnvGd~le 282 (370)
+.+.+|++. .-...+|.|. -.+|+++. + ..|.|.++..+ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 667888751 1235677776 26888874 2 13446777654 6789999999999887531
Q ss_pred hccCCeeccccccCCCCCCCceEEEEEecC
Q 041132 283 ALSNGIYKSCLHRAAVNNTTVRKSLAFFLC 312 (370)
Q Consensus 283 ~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~ 312 (370)
-.+|.|.. ..+.|+||+..+.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899965 4578999988665
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=86.05 E-value=2 Score=37.26 Aligned_cols=83 Identities=10% Similarity=-0.018 Sum_probs=51.1
Q ss_pred eeEEEeccCCCCCCCCCCccccccCCC--------ceEEEecCCCCCeeeee----------CCeeEEccCCCCeEEEEe
Q 041132 216 SIMRLNYYPPCQKPNLTLGTGPHCDPT--------SLTILHQDQVGGLQVYV----------DEQWQSVSPNPDAFVVNI 277 (370)
Q Consensus 216 ~~lr~~~Ypp~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~----------~g~W~~V~p~pg~lvVnv 277 (370)
..+-+|+|.+.. -++++|.|-. +.+|-+. ...-+.+.+ .+..+.+.-.+|+++|.-
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 346799998743 2688999862 2233232 112233332 125788888999999999
Q ss_pred ccchhhccCCeeccccccCCCCCCCceEEEEEe
Q 041132 278 GDTFMALSNGIYKSCLHRAAVNNTTVRKSLAFF 310 (370)
Q Consensus 278 Gd~le~~TnG~~kS~~HRV~~~~~~~R~Si~~F 310 (370)
|++=..|..|.-+.. .....|+|+.|-
T Consensus 174 g~~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred chhhheeEeeccccC------CCCCCEEEEEee
Confidence 987777764432211 123679999984
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=83.58 E-value=4.6 Score=35.87 Aligned_cols=85 Identities=12% Similarity=0.107 Sum_probs=54.3
Q ss_pred eeEEEeccCCCCCCCCCCccccccCCC--------ceEEEecCCCCCeeeeeC-----------CeeEEccCCCCeEEEE
Q 041132 216 SIMRLNYYPPCQKPNLTLGTGPHCDPT--------SLTILHQDQVGGLQVYVD-----------EQWQSVSPNPDAFVVN 276 (370)
Q Consensus 216 ~~lr~~~Ypp~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~~-----------g~W~~V~p~pg~lvVn 276 (370)
..+.+|+|.+-. -++++|.|-. +.||-+. ...=+.+... +..+.+.-.+|+++|+
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 457799998642 2689999952 2233332 1122333221 3688899999999999
Q ss_pred eccchhhccCCeeccccccCCCCCCCceEEEEEecC
Q 041132 277 IGDTFMALSNGIYKSCLHRAAVNNTTVRKSLAFFLC 312 (370)
Q Consensus 277 vGd~le~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~ 312 (370)
-|+.=..|..|.-+.. .....|+|+.|=..
T Consensus 200 ~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 200 EGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred ChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 9998777765554321 12468999998654
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=65.00 E-value=15 Score=31.99 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=50.3
Q ss_pred eeEEEeccCCCCCCCCCCccccccCC-----C--ceEEEecCCCCCeeeee---CCeeEEccCCCCeEEEEeccchhhcc
Q 041132 216 SIMRLNYYPPCQKPNLTLGTGPHCDP-----T--SLTILHQDQVGGLQVYV---DEQWQSVSPNPDAFVVNIGDTFMALS 285 (370)
Q Consensus 216 ~~lr~~~Ypp~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqV~~---~g~W~~V~p~pg~lvVnvGd~le~~T 285 (370)
..+-+|+|.+- . ++++|.|. + ++||-+. ...-+.+.. .+....+.-.+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 44779999762 2 79999993 1 2233332 122233332 3568889999999999988863 23
Q ss_pred CCeeccccccCCCCC-------CCceEEEEEecC
Q 041132 286 NGIYKSCLHRAAVNN-------TTVRKSLAFFLC 312 (370)
Q Consensus 286 nG~~kS~~HRV~~~~-------~~~R~Si~~F~~ 312 (370)
.|.|.... ...|+|+.|-..
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~~ 202 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQA 202 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEECC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeeec
Confidence 36653322 246999998643
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=58.38 E-value=17 Score=34.07 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=61.7
Q ss_pred CceeEEEeccCCCCCCCCCCccccccCCC------ceEEEecCCCCCeeeee-CCeeEEccCCCCeEEEEeccchhhccC
Q 041132 214 HDSIMRLNYYPPCQKPNLTLGTGPHCDPT------SLTILHQDQVGGLQVYV-DEQWQSVSPNPDAFVVNIGDTFMALSN 286 (370)
Q Consensus 214 ~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~lvVnvGd~le~~Tn 286 (370)
....+-+|+|.+- -++++|.|.. +.||-+. ...-+.+.. ++.++.+.-.+|+++|.-|+.=..|..
T Consensus 196 ~~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 196 KPDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CCSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCCEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 3455778999762 2799999974 2233222 122233332 467899999999999999999888977
Q ss_pred CeeccccccCC------------------CCCCCceEEEEEecCCCCC
Q 041132 287 GIYKSCLHRAA------------------VNNTTVRKSLAFFLCPKMD 316 (370)
Q Consensus 287 G~~kS~~HRV~------------------~~~~~~R~Si~~F~~P~~d 316 (370)
|.-+-...-+- ......|+|+.|=..+...
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~ 316 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTP 316 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSC
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCC
Confidence 65443322210 0113469999998877653
No 16
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=46.99 E-value=7.2 Score=37.22 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=37.8
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcC
Q 041132 49 VIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFAT 108 (370)
Q Consensus 49 ~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 108 (370)
++|.||++++..+| +...++.+|+.++|++.+.+-.++.+.. .+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d-----~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYD-----EHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCH-----HHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHHhcCH-----HHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 78999998775422 4556799999999999999988875543 3445555443
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=46.48 E-value=8.3 Score=37.56 Aligned_cols=54 Identities=15% Similarity=0.203 Sum_probs=40.0
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhhcC
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFFAT 108 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 108 (370)
.-||.||++++.++. +.++..+.+++.|++.|.|. ||.+......+.+.+|.+.
T Consensus 99 ~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 99 AVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 469999999875332 11245678899999988776 8998888888877777643
No 18
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=36.24 E-value=56 Score=27.95 Aligned_cols=66 Identities=15% Similarity=0.220 Sum_probs=44.5
Q ss_pred ccccccCCC--ceEEEecCCCCCeeeeeCCeeEEccCCCCeEEEEeccchhhccCCee----ccccccCCCCCCCceEEE
Q 041132 234 GTGPHCDPT--SLTILHQDQVGGLQVYVDEQWQSVSPNPDAFVVNIGDTFMALSNGIY----KSCLHRAAVNNTTVRKSL 307 (370)
Q Consensus 234 g~~~HtD~~--~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~le~~TnG~~----kS~~HRV~~~~~~~R~Si 307 (370)
.+.+|+|.. .+++++. +.+++ +...+.||+.-..|..|.. -|-.|.|...++..|+-+
T Consensus 114 ~I~pH~g~~n~~lR~HL~--------------L~~p~--~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL 177 (197)
T 3rcq_A 114 HVWPHTGPTNCRLRMHLG--------------LVIPK--EGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIF 177 (197)
T ss_dssp EEEEECCSCTTEEEEEEE--------------EECCS--SSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEE
T ss_pred CcCCeeCCCCCeEEEEEE--------------EEeCC--CCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEE
Confidence 378899874 4444442 22222 2344668888888888864 367899988888899887
Q ss_pred EE-ecCCCC
Q 041132 308 AF-FLCPKM 315 (370)
Q Consensus 308 ~~-F~~P~~ 315 (370)
.+ |.+|+.
T Consensus 178 ~~D~~rPdl 186 (197)
T 3rcq_A 178 IVDVWHPEL 186 (197)
T ss_dssp EEEEECTTS
T ss_pred EEeeeCCCC
Confidence 65 666755
No 19
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=33.62 E-value=40 Score=19.65 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhccEEE
Q 041132 68 KICQLVDEACKKHGFFL 84 (370)
Q Consensus 68 ~~~~~l~~A~~~~Gff~ 84 (370)
.+++.|.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 56778899999999998
No 20
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=29.58 E-value=48 Score=29.54 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=35.1
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHHHHhh
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSMLIKKAHKYMDSFF 106 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 106 (370)
++|+-||++... +. +..++|.+++.++|++.+.+-.++.+.. .+.++.|=
T Consensus 16 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPL--SD----NQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCC--CH----HHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEEECCCcCccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 367888998854 22 2345799999999999999988876543 33445443
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.99 E-value=36 Score=22.34 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=17.1
Q ss_pred ceeeCCCCCCCChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSGDPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~d~~~~~~~~~~l~~A~~~ 79 (370)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433333556677777777777665
No 22
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=28.70 E-value=43 Score=30.55 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=36.3
Q ss_pred cccccCC--------CceEEEec-CCCCCeeeeeCCeeEEccCCCCe-EEEEeccchhhccCCeeccccccCCCCCCCce
Q 041132 235 TGPHCDP--------TSLTILHQ-DQVGGLQVYVDEQWQSVSPNPDA-FVVNIGDTFMALSNGIYKSCLHRAAVNNTTVR 304 (370)
Q Consensus 235 ~~~HtD~--------~~lTlL~q-d~~~GLqV~~~g~W~~V~p~pg~-lvVnvGd~le~~TnG~~kS~~HRV~~~~~~~R 304 (370)
+.+|.|+ +.+-++.. ...+|..+.-+|+-+..++ |. ..+|. +..|.|.+.++..|
T Consensus 104 I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d~-------------~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 104 VIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLDA-------------ATVHSAVNFSEISR 168 (290)
T ss_dssp EEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECCT-------------TSCEEEEESSSSCC
T ss_pred eeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEcC-------------CCeeEEEcCCCCCe
Confidence 8899998 22334332 1245555555554443333 32 22222 34899998888899
Q ss_pred EEEEEec
Q 041132 305 KSLAFFL 311 (370)
Q Consensus 305 ~Si~~F~ 311 (370)
+.+++=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988654
No 23
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=27.41 E-value=40 Score=22.05 Aligned_cols=29 Identities=17% Similarity=0.185 Sum_probs=17.4
Q ss_pred ceeeCCCCCCCChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSGDPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~d~~~~~~~~~~l~~A~~~ 79 (370)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433333556777777777777665
No 24
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=27.15 E-value=88 Score=28.82 Aligned_cols=47 Identities=23% Similarity=0.157 Sum_probs=33.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccEEEEEecCCC----HHHHHHHHHHHHHhhc
Q 041132 58 FLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVD----SMLIKKAHKYMDSFFA 107 (370)
Q Consensus 58 l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 107 (370)
|..+++++ +.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 298 l~~g~~e~---i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDK---IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHH---HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHH---HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 44555544 33456666778888777789976 5778999999999975
No 25
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=26.54 E-value=1.4e+02 Score=30.22 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=59.6
Q ss_pred HHHHHHHHhcCCChhHHHhhhcCCceeEEEeccCCCCCCCCCCccccccCC-C--ceEEEec----C------CCCCeee
Q 041132 191 GIMELLGMSLGVGRAHFREFFQGHDSIMRLNYYPPCQKPNLTLGTGPHCDP-T--SLTILHQ----D------QVGGLQV 257 (370)
Q Consensus 191 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~-~--~lTlL~q----d------~~~GLqV 257 (370)
.++..|+...|++. +.+...-+.+++|++.. ....|.|. + .+|+++. | ..|-|++
T Consensus 105 ~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK------LSGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC------CCSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc------cCCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 44456666667631 11111226677886533 37888884 2 3566652 2 2455888
Q ss_pred eeC--------CeeEEccCCCCeEEEEeccchhhccCCeeccccccCC-CCCCCceEEEEEecC-CCC
Q 041132 258 YVD--------EQWQSVSPNPDAFVVNIGDTFMALSNGIYKSCLHRAA-VNNTTVRKSLAFFLC-PKM 315 (370)
Q Consensus 258 ~~~--------g~W~~V~p~pg~lvVnvGd~le~~TnG~~kS~~HRV~-~~~~~~R~Si~~F~~-P~~ 315 (370)
+.. .....|.|..|++|+..-. -+ .++|.|. +..++.|+||+-.++ |..
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 642 2467899999999987531 01 2467652 112678999976544 544
No 26
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=26.12 E-value=33 Score=29.43 Aligned_cols=37 Identities=38% Similarity=0.491 Sum_probs=28.4
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCC
Q 041132 49 VIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVD 91 (370)
Q Consensus 49 ~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 91 (370)
.||++++... +++ ++++.+.+++.+.-.+.+.|||+=
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~ 161 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQV 161 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcE
Confidence 6999998753 232 566788889988888999999963
No 27
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.05 E-value=69 Score=21.28 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=17.8
Q ss_pred ceeeCCCCCCCChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSGDPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~d~~~~~~~~~~l~~A~~~ 79 (370)
|+|.+.- ...+.++++++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555544 344667777777777777764
No 28
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=24.06 E-value=70 Score=28.78 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=36.4
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecC-CCHHHHHHHHHHHHHhhcC
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHG-VDSMLIKKAHKYMDSFFAT 108 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~l 108 (370)
++|+-||++... +. +..++|.+++.++|++.+.+-. ++. ++..+.++.|=.+
T Consensus 26 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDL--DA----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 357778998754 22 2345799999999999999887 775 4445556655443
No 29
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.65 E-value=38 Score=24.01 Aligned_cols=40 Identities=13% Similarity=0.283 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHhhh
Q 041132 172 RQFGKVYQEYCEAMSSLSLGIMELLGMSLGVGRAHFREFF 211 (370)
Q Consensus 172 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 211 (370)
..-+..+++|+..-.+-...-+..||..+||+.+.....|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 3456888888887777777888899999999998776666
No 30
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.41 E-value=56 Score=21.89 Aligned_cols=29 Identities=21% Similarity=0.305 Sum_probs=18.1
Q ss_pred ceeeCCCCCCCChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSGDPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~d~~~~~~~~~~l~~A~~~ 79 (370)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433344667777777777777775
No 31
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=22.24 E-value=57 Score=21.18 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=18.1
Q ss_pred ceeeCCCCCCCChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSGDPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~d~~~~~~~~~~l~~A~~~ 79 (370)
|.|.+.-....+++++++++++|.+++.+
T Consensus 4 P~i~i~~~~g~s~e~k~~l~~~l~~~l~~ 32 (63)
T 2x4k_A 4 PIVNVKLLEGRSDEQLKNLVSEVTDAVEK 32 (63)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 56666544333556677777777777765
No 32
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=22.19 E-value=20 Score=25.97 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=14.8
Q ss_pred EEeccchhhccCCeecccc
Q 041132 275 VNIGDTFMALSNGIYKSCL 293 (370)
Q Consensus 275 VnvGd~le~~TnG~~kS~~ 293 (370)
..+||.||++.+|++.++.
T Consensus 31 lHCGE~feV~v~~~WiptR 49 (81)
T 3nrl_A 31 LHCGECFDVKVKDVWVPVR 49 (81)
T ss_dssp CCTTCEEEEEETTEEEEEE
T ss_pred cccccEEEEEECCEEEEEE
Confidence 3588888888888888664
No 33
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.87 E-value=82 Score=24.47 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=26.4
Q ss_pred eeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCCHH
Q 041132 52 PIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVDSM 93 (370)
Q Consensus 52 vIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 93 (370)
|||++.+.. + .+ ...|.+.|+++|+.-|--.|.+.+
T Consensus 51 VlDl~~l~~-~-~d----l~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLES-P-VN----WPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCS-S-CC----HHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCC-h-HH----HHHHHHHHHHcCCEEEEEeCCCcH
Confidence 689998852 1 22 236889999999999877776654
No 34
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=21.56 E-value=46 Score=28.59 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=28.2
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCCC
Q 041132 49 VIPPIDLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGVD 91 (370)
Q Consensus 49 ~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 91 (370)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+=
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~ 158 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcE
Confidence 6899988653 222 566788899988888999999963
No 35
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=21.29 E-value=1.6e+02 Score=25.20 Aligned_cols=41 Identities=7% Similarity=-0.003 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhccEEEEEe-cCCCHHHHHHHHHHHHH
Q 041132 64 FEVDKICQLVDEACKKHGFFLVVN-HGVDSMLIKKAHKYMDS 104 (370)
Q Consensus 64 ~~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 104 (370)
+.+.+.+++|.+.+.++..++|++ +|++...+.++....++
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456778889999999998888886 68998888888777653
No 36
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=20.74 E-value=77 Score=22.06 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=20.8
Q ss_pred ceeeCCCCCCC-ChHHHHHHHHHHHHHHHh
Q 041132 51 PPIDLCSFLSG-DPFEVDKICQLVDEACKK 79 (370)
Q Consensus 51 PvIDls~l~~~-d~~~~~~~~~~l~~A~~~ 79 (370)
|.|.+.-+... ++++++++++.|.+++.+
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~ 30 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIR 30 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 55665444444 677888889999888886
No 37
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=20.36 E-value=37 Score=29.02 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=26.9
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHHHhcc---EEEEEecCCC
Q 041132 48 LVIPPIDLCSFLSGDPFEVDKICQLVDEACKKHG---FFLVVNHGVD 91 (370)
Q Consensus 48 ~~iPvIDls~l~~~d~~~~~~~~~~l~~A~~~~G---ff~l~nhgi~ 91 (370)
..||++++. .+ ..++++.+.+++.+.+ .+.+.|||+=
T Consensus 138 ~~vp~~~~~---~g----~~~La~~i~~~l~~~~~~~avll~nHG~~ 177 (208)
T 2irp_A 138 IKIPIFPNE---QN----IPLLAKEVENYFKTSEDKYGFLIRGHGLY 177 (208)
T ss_dssp CEEEEECCC---SC----HHHHHHHHHHHHHHCSCCSCEEETTTEEE
T ss_pred cceeeecCC---CC----HHHHHHHHHHHHhcCCCceEEEEcCCCCe
Confidence 468888763 22 2367778888998875 7888999963
No 38
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=20.14 E-value=57 Score=27.72 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=27.0
Q ss_pred Cccee-eCCCCCCCChHHHHHHHHHHHHHHHhccEEEEEecCC
Q 041132 49 VIPPI-DLCSFLSGDPFEVDKICQLVDEACKKHGFFLVVNHGV 90 (370)
Q Consensus 49 ~iPvI-Dls~l~~~d~~~~~~~~~~l~~A~~~~Gff~l~nhgi 90 (370)
.||++ ++... +++ ++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77643 232 55667888888888899999995
Done!