BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041134
(267 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147815945|emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera]
Length = 539
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 43/288 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CA+H + H T CR+L +E +I G LK++++ + + P+N N+ K I
Sbjct: 256 CAYHKEHGHTTERCRSLHYLVERVIKVGHLKQYLRSKARVRDTPRNHNSGTSKTPIV--- 312
Query: 58 SEPEQIVNTIM-APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK-----------LDV 105
P+ ++N I PL E + +++ + + + ++C+ +
Sbjct: 313 --PKAVINYIHRGPLDEEYNSKRKKQRLLRAKSV-------RECINSIWPGITGGSARPI 363
Query: 106 QSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQD 165
+ F P D I PH DAL++ + IG+ VRRILID G+SV++L + + +M LE
Sbjct: 364 DGTIVFPPIDPTRILQPHRDALILFLGIGDFDVRRILIDPGNSVDLLQASVINQMGLELS 423
Query: 166 KIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMR 214
++ L GF+G T S G ++ FLVV SP+NAILGR W+H M+
Sbjct: 424 DLENPGLILSGFNGAATTSLGDIMLSVQVGPVTLNVQFLVVGDLSPFNAILGRTWLHYMK 483
Query: 215 VVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRN 262
+PSTYHQ++ + T G ++ G Q R C + RE+GS+++
Sbjct: 484 TIPSTYHQMVSFLTEDGQIDLYGSQLAARQCY-----QIAREVGSSKD 526
>gi|158828139|gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 672
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 35/270 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQL-----KEFVKVEDKQPQNQNNFLKKDQIEN 55
C H H T+DC LKK++ EL + G L K+FVK + +N + K +
Sbjct: 403 CDIHKVTGHLTKDCSILKKHLAELWASGDLSKFDIKDFVKEYHEAKENSKDQDSKRPRLS 462
Query: 56 STSEPEQI---VNTIMAPLPL---EVHMTKE--RNVYCKKREIEAPEEFSKKCVKLDVQ- 106
+ EP +N I+ + K+ RNV K E ++D Q
Sbjct: 463 NEEEPRSSKGRINVILGGSRFCGDSISSIKKHRRNVLLKASLSE----------EIDFQG 512
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+ +SF ++ + ++ PHDDALVI++ + N V RILID GSSV+++ +T+EKM + +
Sbjct: 513 ASISFNEEETRHLERPHDDALVITLDVANFEVSRILIDTGSSVDLIFLSTLEKMGISRGD 572
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRV 215
I PL+ F+ S G++ + DF+V + YN ILG WI++M+
Sbjct: 573 IVGPPSPLVAFTSESAMSLGTIKLPVLAKKVSKIVDFVVFDKPAAYNIILGTPWIYRMKA 632
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VPSTY+Q + + T G+E I GDQ +RTC
Sbjct: 633 VPSTYYQCIKFPTSNGVETIRGDQEASRTC 662
>gi|147788587|emb|CAN63201.1| hypothetical protein VITISV_042456 [Vitis vinifera]
Length = 534
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 23/256 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H + H T CR+L ++E+LI G LK++++ + + N + + P
Sbjct: 266 CVYHKEHGHTTETCRSLHYFVEKLIKAGHLKQYLRSKARGRDASRN--HNSGTPRAPAAP 323
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ I+N I L E + +K +KR+ + V+ V S + F P D I
Sbjct: 324 KVIINYINGGLFDEEYDSK------RKRQ----KLLRVALVRERVNSTIIFPPVDPTRIL 373
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
P+ DAL++S+KIG+ VRRIL+D SS +++ + + M +K Q L GF+G
Sbjct: 374 RPYRDALILSLKIGDFDVRRILVDPDSSTDLVQASIISHMGRSLTGLKNPRQILPGFNGA 433
Query: 181 VTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+V+P TYHQ++ + T
Sbjct: 434 STTSLGDIVLSVQADPVTLNIQFSVVQDLSPFNVILGRTWLHYMKVIPYTYHQMVSFLTK 493
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 494 DGQVDLYGSQLVARQC 509
>gi|147780457|emb|CAN72634.1| hypothetical protein VITISV_007594 [Vitis vinifera]
Length = 455
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 28/280 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
C +HN H T CR+L +E LI G LK++++ + + +N N+ K +
Sbjct: 169 CVYHNKHGHTTEMCRSLHYLVERLIKAGHLKQYLRFDARVRDTSRNHNSGTSKIPVA--- 225
Query: 58 SEPEQIVNTIM-APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK----LDVQSEVSFL 112
P ++N I PL E +R + I + + + + F
Sbjct: 226 --PRAVINYIHKGPLDEEYDSKGKRQRLLRAASIWERVNSIRPGIAGRGPRPIDGTIVFP 283
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D I PH DAL++S+++ + VRRILID GSS ++L + + M + ++ +
Sbjct: 284 PVDPTWILQPHHDALILSLEMRDFDVRRILIDLGSSADLLQTSVIGHMGRDLSGLENPGR 343
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ FLVV+ SP+NAILGR W+H M+V+PSTYH
Sbjct: 344 ILSGFNGATTTSLGDIVLPVQAGPVTLNVQFLVVQDLSPFNAILGRTWLHYMKVIPSTYH 403
Query: 222 QVLCYQTIYGIEEIGGDQATTRTCA----SNGMGKQNREL 257
Q++ + T G ++ +Q TR C G +++R L
Sbjct: 404 QMVSFLTEDGQIDLHDNQLATRQCYQIAREAGTNQEDRSL 443
>gi|147769210|emb|CAN65075.1| hypothetical protein VITISV_008148 [Vitis vinifera]
Length = 512
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 132/266 (49%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ ++ + PQ+ N + +
Sbjct: 229 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDNGRRDTPQHHNPGNLR-----AP 283
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
+ P+ ++N I+ P E ++R + I P + +D +
Sbjct: 284 AAPKAVINYIIGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPCPID--GTII 341
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRILID GSS +++ + + M ++
Sbjct: 342 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVMGHMGHTLTGLENP 401
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
E+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 402 ERILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 461
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 462 YHQMVSFLTNDGQIDLYGSQLAARQC 487
>gi|147854055|emb|CAN83396.1| hypothetical protein VITISV_021698 [Vitis vinifera]
Length = 467
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED-----KQPQNQNNFLKKDQIEN 55
CAFH D H T CR+ + +E+LI G LK++++ ++ Q N N
Sbjct: 184 CAFHKDHGHTTETCRSFQFLVEKLIKAGHLKQYLRSDNGGRDASQRHNPGNL-------R 236
Query: 56 STSEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVS 110
+ + P+ ++N I P E ++R + I + + + + +
Sbjct: 237 APAAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTII 296
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V +M + ++
Sbjct: 297 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRMGRSLEGLENP 356
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 357 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 416
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 417 YHQMVSFLTNDGQIDLYGSQLAARQC 442
>gi|147775423|emb|CAN76097.1| hypothetical protein VITISV_005211 [Vitis vinifera]
Length = 500
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 18/256 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR L+ +E LI G LK++++ + ++ + +
Sbjct: 227 CAFHKDHDHTTETCRALQYLVERLIKAGHLKQYLRSDTG---GRDAYQHHNPGXPRAPAA 283
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ V + P + KE + K R P +++ + + F P D
Sbjct: 284 PKAVINYINGRPAD----KEYDSXRKXRNCCRPRQYANALGPRPIDGTIIFPPVDPTRTL 339
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 340 QPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENPRRILSGFNGS 399
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 400 STTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKDIPSTYHQMVSFLTN 459
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 460 EGQIDLYGSQLAARQC 475
>gi|147785767|emb|CAN62122.1| hypothetical protein VITISV_016419 [Vitis vinifera]
Length = 537
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH D H CR+L+ +E+LI G LK++V+ + K +N + + +
Sbjct: 254 CAFHKDHGHTIEACRSLQYLVEKLIKAGHLKQYVRSDAGGKVTSQHHN----PEAPRAPT 309
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLP 113
P+ I+N I P E ++R + + I + + + + F P
Sbjct: 310 VPKAIINYINGGPSNEEYDSRRKRQKLLRAASIRERINSTRPGLTRGGPRPIDGTIIFPP 369
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 370 VDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENLGRV 429
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+ GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ
Sbjct: 430 MSGFNGSSTTSLGDIILPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQ 489
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 490 MVSFLTDEGQIDLYGSQLAARQC 512
>gi|147835120|emb|CAN63372.1| hypothetical protein VITISV_035289 [Vitis vinifera]
Length = 549
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFV--KVEDKQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR + +E LI G LK+++ ED+ NN +
Sbjct: 266 CAFHKDHGHTTETCRVFQFLVERLIKAGHLKQYLCTDTEDRDISQHNN----PGAPRVSV 321
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLP 113
P+ ++N I P E ++R + I + + + + + F P
Sbjct: 322 APKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPP 381
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSSV+++ + V++M ++ +
Sbjct: 382 VDPARTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVVDRMGHSLAGLENPGRI 441
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 442 LSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQ 501
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 502 MVSFLTNDGQIDLYGSQLAARQC 524
>gi|147781482|emb|CAN64960.1| hypothetical protein VITISV_006740 [Vitis vinifera]
Length = 502
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 28/260 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI GQLK++++ + Q+ N+ + +
Sbjct: 231 CAFHKDHGHTTETCRSLQYLVERLIKAGQLKQYIRSDTGGRDVSQHHNSGASRAPVA--- 287
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E + ++R + I E + L + +
Sbjct: 288 --PKAVINYINGGPSDEEYNSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 343
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M + +
Sbjct: 344 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---EHSLAGL 400
Query: 171 EQP---LIGFSGIVTYSDGSLLTDFLVVKAT--SPYNAILGRQWIHKMRVVPSTYHQVLC 225
E P L GF+G T S G ++ L V+A SP+N ILGR W+H M+ +PSTYHQ++
Sbjct: 401 ENPGRILSGFNGSSTTSLGDII---LPVQAGPLSPFNVILGRTWLHYMKAIPSTYHQLVS 457
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 458 FLTNEGQTDLYGSQLAARQC 477
>gi|147833921|emb|CAN75010.1| hypothetical protein VITISV_003558 [Vitis vinifera]
Length = 446
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 32/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++ + + Q+ N+ + +
Sbjct: 163 CAFHKDHXHTTETCRSLQYLVERLIKAGHLKQYXRSDTGGRDXSQHHNSXAPRAPVA--- 219
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSE-------- 108
P+ ++N I P E ++R + I E + ++L + E
Sbjct: 220 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERIN--SIRLGLTGEGPRPIDGI 273
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 274 IIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLE 333
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +P
Sbjct: 334 NPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIP 393
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ++ + T G ++ G Q R C
Sbjct: 394 STYHQMVSFLTDEGQTDLYGSQLAARQC 421
>gi|147794769|emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
Length = 635
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 22/262 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H D H T CR+L +E+L+ G LK++++ K + + + + + P
Sbjct: 354 CDYHKDHGHTTETCRSLHYMVEDLLKAGHLKQYIRTVPKGEGSSHG-----RGPCAPAAP 408
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLPQ 114
++V + PL+ + +R R E S L + + F
Sbjct: 409 VRVVINYIHGGPLDDEYSSKRKRQRLLRAATVREHVSSIQPGLASGGIHPIDGTIVFPAV 468
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D + PH DAL++++ +G+ V+RIL+D GSS ++L A +++M ++ E+ L
Sbjct: 469 DPAQVLQPHRDALILTLGVGDFDVKRILVDPGSSADLLQVAVIKQMGFIPSSLENPERTL 528
Query: 175 IGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G + F VV+ SP+NAILGR W+H M+VVPSTYHQ+
Sbjct: 529 FGFNGSSTTSLGDVTLPVQAGPVILNALFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQM 588
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ G Q R C
Sbjct: 589 VSFITQDGQIDLYGSQLAARQC 610
>gi|147776094|emb|CAN67707.1| hypothetical protein VITISV_038230 [Vitis vinifera]
Length = 549
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+L+ +E LI G LK++++ + + D + P
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGD--PRAPVAP 323
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVSFLP 113
+ ++N I P E ++R + I P + +D + F P
Sbjct: 324 KAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGSRPID--GTIIFPP 381
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 382 VDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGRI 441
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ
Sbjct: 442 LSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQ 501
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 502 MVSFLTNEGQTDLYGSQLAARQC 524
>gi|147787156|emb|CAN64648.1| hypothetical protein VITISV_006642 [Vitis vinifera]
Length = 385
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ ++ PQ+ N + +
Sbjct: 102 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDNGGRDAPQHHNPGNLR-----AP 156
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E ++R + + I + + + + F
Sbjct: 157 AAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTRGGPRPIDGTIIFP 216
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 217 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENPGR 276
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 277 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 336
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 337 QMVSFLTNDGQIDLYGSQLAARQC 360
>gi|147765578|emb|CAN64747.1| hypothetical protein VITISV_041324 [Vitis vinifera]
Length = 533
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH+D H T CR+L+ +E LI G LK++++ D +N + S + P
Sbjct: 250 CAFHSDHGHTTETCRSLQYLVERLIRAGHLKQYLR-SDAGGRNASQHHNSGAPRASVA-P 307
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQD 115
+ ++N I P E ++R + I + + + + + F P D
Sbjct: 308 KAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPVD 367
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S+ IG+ VRR+L+D GSS +++ + + M ++ + L
Sbjct: 368 PTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENPGRILS 427
Query: 176 GFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++
Sbjct: 428 GFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMV 487
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 488 SFLTNEGQTDLYGSQLAARQC 508
>gi|147818476|emb|CAN65181.1| hypothetical protein VITISV_007174 [Vitis vinifera]
Length = 549
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ E Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSEAGGRDASQHHNSXXPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D SS +++ + V MR ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVGHMRHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLLT-----------DFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNGSSTTFLGDIILPVQAGPVTLNLQFSVVQELSPFNVILGRTWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147866075|emb|CAN83046.1| hypothetical protein VITISV_015526 [Vitis vinifera]
Length = 549
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E+LI G LK++++ ++ PQ+ N + +
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVEKLIKAGHLKQYLRSDNGGRDAPQHHNPGNLR-----AP 320
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ ++N I P E ++R + I E + L + +
Sbjct: 321 AAPKAVINYITGGPSDEEFDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147857191|emb|CAN79223.1| hypothetical protein VITISV_018836 [Vitis vinifera]
Length = 549
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
C FH D H T CR+ + +E+LI G LK++++ +++ PQ N + +
Sbjct: 266 CXFHKDHGHTTETCRSFQFLVEKLIKAGHLKQYLRADNRGRDAPQRHNPGNLR-----AP 320
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSE------VS 110
+ P+ ++N I P E ++R + I E + L +S +
Sbjct: 321 AAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGESPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRI++D GSS +++ + V +M ++
Sbjct: 379 FPPVDPTRTLQPHXDALILSLEIGDFDVRRIVVDPGSSADLVQASVVGRMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147773339|emb|CAN60477.1| hypothetical protein VITISV_014549 [Vitis vinifera]
Length = 483
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH D H T CR L +++LI G LK++++ + PQN+N+ + +
Sbjct: 224 CVFHKDHGHTTETCRCLHFLVKKLIKAGHLKQYLRSDAGGRDVPQNRNSGAPR-----AP 278
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ + ++N I P E ++R + + I + + + F
Sbjct: 279 ATAKAVINYINGGPSDEEYDSRRKRQRLLRAALVRERINSIRPGLTGGGPRPIDGTIIFP 338
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ Q
Sbjct: 339 PADPARTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENPGQ 398
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 399 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYH 458
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 459 QIVSFLTNNGQTDLYGSQLAARQC 482
>gi|147857916|emb|CAN82528.1| hypothetical protein VITISV_028060 [Vitis vinifera]
Length = 549
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ ++ Q PQ+ N + +
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDNGQRNAPQHHNPGNLR-----AP 320
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ ++N I P E ++R + I E + L + +
Sbjct: 321 AAPKDVINYITGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VR IL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGHMGHTLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147772290|emb|CAN63006.1| hypothetical protein VITISV_038956 [Vitis vinifera]
Length = 527
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK+++ Q+ N+ + +
Sbjct: 244 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLXSXAGGRDASQHHNSRAPRAPVA--- 300
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E + ++R + I E + L + +
Sbjct: 301 --PKAVINYINGGPSDEEYYSRRKRQKLLRAASIR--EHINSIRPGLTGEGPRPIDGTII 356
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S+ IG+ VRR+L+D GSS N++ + + M ++
Sbjct: 357 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSANLVQASVIGHMGHSLTGLENP 416
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 417 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 476
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 477 YHQMVSFLTNEGQTDLYGSQLAARQC 502
>gi|147807570|emb|CAN66184.1| hypothetical protein VITISV_025184 [Vitis vinifera]
Length = 465
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIE-NS 56
CAFH + H T CR+L+ +E+LI G LK++++ + + Q+ N + + +
Sbjct: 197 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVVSQHYNPGAPRAPVAPRA 256
Query: 57 TSEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK-----------LD 104
P+ ++N I P E ++R + + ++C+
Sbjct: 257 PVAPKAVINYINGGPSDEEYDSRRKRQKLLRAASV-------RECINSIRPGLTGGGPRP 309
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 310 IDGTIIFPPVDPTRTLQPHHDALILSLEIGDFDVRRILVDPGSSADLIQASVVSHMGHSL 369
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ FLVV+ SP+N ILGR W+H M
Sbjct: 370 TGLENPGRVLSGFNGSSTTSLGDIVLPVQAGPVTLNVQFLVVQELSPFNIILGRTWLHYM 429
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 430 KAIPSTYHQMVSFLTNEGQIDLYGSQLAARQC 461
>gi|147802261|emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]
Length = 549
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E +R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRLKRQKLLRAASIRERINSIRSGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLVSLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G+Q TR C
Sbjct: 501 QMVSFLTNDGQTDLYGNQLATRQC 524
>gi|147863622|emb|CAN84034.1| hypothetical protein VITISV_016994 [Vitis vinifera]
Length = 535
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T C++L+ +E LI G LK++++ E Q+ N+ + +
Sbjct: 252 CAFHKDHGHTTETCQSLQYLVERLIKAGHLKQYLRSEAGGRDASQHHNSGAPRAPVA--- 308
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 309 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 364
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 365 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENP 424
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G+++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 425 GRILSGFNGSSTTSLGNIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 484
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 485 YHQMVSFLTNDGQTDLYGSQLVARQC 510
>gi|147845985|emb|CAN84173.1| hypothetical protein VITISV_001473 [Vitis vinifera]
Length = 525
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + + Q+ N+ + +
Sbjct: 244 CAFHKDHGHTTETCRSLQYLVETLIKAGHLKQYLRSDTRGRDASQHHNSGAPRAPVA--- 300
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 301 --PKAVINYINGGPSDEEYDSRRKRQKLLRAALIRERINSIRPGLTGEGPHPIDGTIIFP 358
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P + PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 359 PANPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENPGR 418
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 419 ILSGFNGSSTTSLGDIILPVRAGPITLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYH 478
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 479 QMVSFLTDEGQTDLYGSQLAARQC 502
>gi|147821394|emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]
Length = 549
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + PQ+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDAPQHHNSGXPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D SS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPXSSXDLVXASVIGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147840514|emb|CAN70567.1| hypothetical protein VITISV_010971 [Vitis vinifera]
Length = 549
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 26/265 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYIRSDTEGRDVSQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
P+ ++N I P + R R E + L + + F
Sbjct: 323 --PKAVINYING-GPXDEEYDSRRKXQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 380 PPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPG 439
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 440 RILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTY 499
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 500 HQMVSFLTDEGQTDLYGXQLAARQC 524
>gi|147844137|emb|CAN80571.1| hypothetical protein VITISV_004508 [Vitis vinifera]
Length = 533
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH D H T CR + +E LI LK++++ +++ Q+ N + +
Sbjct: 265 CAFHKDHGHTTETCRAFQYLVERLIKVRHLKQYLRSDNEGRDASQHHN-----PRAPRAP 319
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E + ++R V + I + + + F
Sbjct: 320 ATPKAVINYINGGPSDEEYNSRRKRQKLLRVASIREHINSIRPGLTGGGPRPIDGTIIFP 379
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS N++ + V M +K +
Sbjct: 380 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTNLVQASVVGHMGHSLTGLKNPGR 439
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 440 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYH 499
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 500 QMVSFLTNEGQIDLYGSQLAARQC 523
>gi|147842411|emb|CAN73937.1| hypothetical protein VITISV_022710 [Vitis vinifera]
Length = 527
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED-----KQPQNQNNFLKKDQIEN 55
C FH D H T CR+ + +E+LI G LK++++ ++ Q N N
Sbjct: 244 CXFHKDHGHTTETCRSFQFLVEKLIKAGHLKQYLRSDNGGRDASQRHNPGNL-------R 296
Query: 56 STSEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVS 110
+ + P+ ++N I P E ++R + I + + + + +
Sbjct: 297 APAAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTII 356
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V +M ++
Sbjct: 357 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVVGRMGRSLAGLENP 416
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 417 GRILSGFNGSSTTSLGDIILSIQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 476
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 477 YHQMVSFLTNDGQIDLYGSQLAARQC 502
>gi|147858515|emb|CAN83099.1| hypothetical protein VITISV_008534 [Vitis vinifera]
Length = 515
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 232 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 286
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 287 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 346
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 347 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGR 406
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 407 ILSGFNGSSTTSLGDIILPVRAGPVXLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYH 466
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 467 QMVSFLTNEGQTDLYGSQLAARQC 490
>gi|147783039|emb|CAN61180.1| hypothetical protein VITISV_041927 [Vitis vinifera]
Length = 549
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIQPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V +M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YH+++ + T G ++ G+Q R C
Sbjct: 499 YHKMVSFLTNDGQIDLYGNQLAARQC 524
>gi|147854331|emb|CAN83421.1| hypothetical protein VITISV_034226 [Vitis vinifera]
Length = 549
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147820022|emb|CAN64897.1| hypothetical protein VITISV_002236 [Vitis vinifera]
Length = 549
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147818536|emb|CAN67468.1| hypothetical protein VITISV_031394 [Vitis vinifera]
Length = 549
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 30/267 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPGAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M + E
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHGLAGLEN 437
Query: 173 P---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPS 218
P L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PS
Sbjct: 438 PGRILSGFNGSSTTSLGDIILPVRAGPVILNVQFSVVQELSPFNIILGRTWLHYMKAIPS 497
Query: 219 TYHQVLCYQTIYGIEEIGGDQATTRTC 245
TYHQ++ + T G ++ G Q R C
Sbjct: 498 TYHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147791488|emb|CAN65609.1| hypothetical protein VITISV_036151 [Vitis vinifera]
Length = 549
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQRLLRAASIRERINSIRSGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+ T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNRSSTTSLGDIILPVRAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147851958|emb|CAN82272.1| hypothetical protein VITISV_006243 [Vitis vinifera]
Length = 472
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 23/258 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E LI G LK++++ + + + + P
Sbjct: 205 CAFHKEHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQH--HSSGAPRAPATP 262
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLP 113
+ ++N I P E ++R + I E + L + + F P
Sbjct: 263 KAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIWPGLTGRGPRPIDGTIIFPP 320
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 321 VDPTWTLQPHRDALILSLEIGDYDVRRILVDPGSSADLVQASVVSHMGHNLTGLENPGRI 380
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ FLVV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 381 LSGFNGSSTTSLGDIILSVQADPVTLNVQFLVVQELSPFNVILGRTWLHYMKAIPSTYHQ 440
Query: 223 VLCYQTIYGI-EEIGGDQ 239
+L + Y I E G DQ
Sbjct: 441 MLVARQCYQIAREAGTDQ 458
>gi|147833423|emb|CAN68523.1| hypothetical protein VITISV_025156 [Vitis vinifera]
Length = 483
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T R+ + +E LI G LK++++ ++ + PQ+ N + +
Sbjct: 200 CAFHKDHGHTTETYRSFQYLVERLIKAGHLKQYLRSDNGRRDAPQHHNPGNLR-----AP 254
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ ++N I P E ++R + I E + +L + +
Sbjct: 255 AAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPRLTGGSPRPIDGTII 312
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRILID GSS +++ + + M ++
Sbjct: 313 FPPVDPTWTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVMSHMGHTLTGLENP 372
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 373 GRILSGFNGSSTTSLGDIVLPVQAGSVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 432
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 433 YHQMVSFLTNDGQIDLYGSQLVARQC 458
>gi|147795811|emb|CAN76528.1| hypothetical protein VITISV_017594 [Vitis vinifera]
Length = 477
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH D H T CR L +++LI GQLK++++ + PQN+N+ + ++
Sbjct: 218 CVFHKDHGHTTETCRCLHFLVKKLIKAGQLKQYLRSDAGGRDVPQNRNSGAPR-----AS 272
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSK-KCVKLD--------VQSE 108
+ P+ +++ I E + ++ + ++R + A + ++L +
Sbjct: 273 AAPKAVISYINGGPSDEEYDSRRK----RQRLLRAASTRERINSIRLGLTGGGPRPIDGT 328
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F P D PH D L++S++IG+ VRRILID GSS +++ + V M ++
Sbjct: 329 IIFPPVDPTRTLQPHRDTLILSLEIGDFDVRRILIDPGSSADLVQASVVSHMGHSLTGLE 388
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +P
Sbjct: 389 NPGRILSGFNGSSTTSLGDIVLPVQSGPVTLNVQFSVVQDLSPFNIILGRTWLHYMKAIP 448
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ++ + T G ++ G Q R C
Sbjct: 449 STYHQMVSFLTNDGQIDLYGSQLAARQC 476
>gi|147825269|emb|CAN71085.1| hypothetical protein VITISV_036778 [Vitis vinifera]
Length = 549
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 32/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED-----KQPQNQNNFLKKDQIEN 55
CAFH D H T CR +E LI G LK++++ ++ Q N N
Sbjct: 266 CAFHKDHGHTTETCRAFHFLVERLIKAGHLKQYLRSDNGGRDASQHHNPGN-------PR 318
Query: 56 STSEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSE 108
+ + P+ ++N I P E ++R + I E + L +
Sbjct: 319 APAAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGT 376
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 377 IIFPPIDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLE 436
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +P
Sbjct: 437 NPGRILSGFNGSSTTSLGDIVLPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIP 496
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ++ + T G ++ G Q R C
Sbjct: 497 STYHQIVSFLTNDGQIDLYGSQLAARQC 524
>gi|147843831|emb|CAN79445.1| hypothetical protein VITISV_042481 [Vitis vinifera]
Length = 549
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH+D H T CR+L+ +E LI G LK+++ + Q+ N+ + +
Sbjct: 266 CAFHSDHGHTTETCRSLQYLVERLIRAGHLKQYLXSDAGGRDASQHHNSGAPRPPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
P+ ++N I P E ++R + I P + +D +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPXPID--GTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S+ IG+ VRR+L+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKXIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147773580|emb|CAN65419.1| hypothetical protein VITISV_023203 [Vitis vinifera]
Length = 549
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRALVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D SS +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVIGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQADPITLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTDEGQTDLYGSQLAARQC 524
>gi|147858370|emb|CAN81414.1| hypothetical protein VITISV_027487 [Vitis vinifera]
Length = 534
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR L+ ++ LI G LK++++ + N + + + P
Sbjct: 251 CAFHKEHGHTTETCRCLQNLVKRLIKAGHLKQYLRSDTGGRDTSQN--RNSGAPRTLAAP 308
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + + + + F P D
Sbjct: 309 KAVINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIRPGLTRGGPRPIDGTIIFPPVD 368
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S++IG+ VRRILID SS N++ V M ++ + L
Sbjct: 369 PTRTLQPHRDALILSLEIGDFDVRRILIDPSSSANLVQALVVSHMGHSLTGLENPGRILS 428
Query: 176 GFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G +L F VV+ SP+N ILGR W+H M+ +PSTYHQ++
Sbjct: 429 GFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYHQMV 488
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 489 SFLTKDGQIDLYGSQLAARQC 509
>gi|147866371|emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]
Length = 549
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR +E LI G LK++++ + Q+ N + +
Sbjct: 266 CAFHKDHGHTTETCRAFXFLVERLIKAGHLKQYLRTDTGGRDVSQHSNPGAPRVPVA--- 322
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ I+N I P E ++R + I + + + + + F
Sbjct: 323 --PKAIINYIXGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V +M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147840280|emb|CAN68426.1| hypothetical protein VITISV_022197 [Vitis vinifera]
Length = 503
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 25/263 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR L +E LI G LK++ + + N + +++ P
Sbjct: 223 CAFHKDHGHTTETCRALHFLVERLIKAGHLKQYFRSD-----NGGRDASQHHNPGASATP 277
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLP 113
+ ++N I P E ++R + I E + L + + F
Sbjct: 278 KAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGWGPRPIDGTIIFPL 335
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSS +++ + V MR ++ +
Sbjct: 336 VDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMRHTLTGLENPGRI 395
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 396 LSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQ 455
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 456 MVSFLTNDGQIDLYGSQLAARQC 478
>gi|147812424|emb|CAN61874.1| hypothetical protein VITISV_031102 [Vitis vinifera]
Length = 543
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 379 FPPXDPXRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+ T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNXSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTDEGQTDLYGSQLAARQC 524
>gi|147840668|emb|CAN66268.1| hypothetical protein VITISV_003570 [Vitis vinifera]
Length = 512
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ ++ PQ+ N + +
Sbjct: 229 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDNGGRDAPQHHNPGNLR-----AP 283
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E ++R + + I + + + F
Sbjct: 284 TAPKAVINYITGGPSDEEYDSRRKRQKLLRAASMRERINSIRPGLTGGGPRPIDGTIIFP 343
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 344 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENPGR 403
Query: 173 PLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G +L F VV+ SP+N ILG W+H M+ +PSTYH
Sbjct: 404 ILSGFNGSSTTSLGDIVLPVQAGPVTLKVQFSVVQELSPFNVILGHTWLHYMKTIPSTYH 463
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 464 QMVSFLTNDGQIDLYGSQLAARQC 487
>gi|147827043|emb|CAN62280.1| hypothetical protein VITISV_036523 [Vitis vinifera]
Length = 549
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+ + + LI G LK++++ ++ PQ+ N + +
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVXRLIKAGHLKQYLRSDNGGRDAPQHHNPGNLR-----AP 320
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ ++N I P E ++R + I E + L + +
Sbjct: 321 AAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMSHMGHTLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G +L F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQASPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147807779|emb|CAN68845.1| hypothetical protein VITISV_032037 [Vitis vinifera]
Length = 526
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 253 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 309
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
P+ ++N I E + ++ K++++ ++ + + F P D
Sbjct: 310 --PKVVINYINGGPSDEEYDSRR-----KRQKLLRAASIRERINSIRSDGTIIFPPVDPT 362
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
PH DAL++S++IG+ VR IL+D GSS +++ + V M ++ + L GF
Sbjct: 363 RTLQPHRDALILSLEIGDFDVRCILVDPGSSADLVQASVVGHMGHSLAGLENPRRILSGF 422
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ +
Sbjct: 423 NGSSTTSLGDIILSVQAGPITLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQMVSF 482
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ Q R C
Sbjct: 483 LTNEGQTDLYDSQLAARQC 501
>gi|147822718|emb|CAN72694.1| hypothetical protein VITISV_005169 [Vitis vinifera]
Length = 549
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CVFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNSGAPRALVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTDEGQTDLHGSQLAARQC 524
>gi|147854944|emb|CAN82408.1| hypothetical protein VITISV_023300 [Vitis vinifera]
Length = 549
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ + + PQ+ N + +
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDSGRRDTPQHHNPGNLR-----AP 320
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
+ P+ ++N I P E ++R + I + + + + + F
Sbjct: 321 AAPKAVINYITGDPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPHPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRILID GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLEDPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L F+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSEFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147780794|emb|CAN77221.1| hypothetical protein VITISV_033122 [Vitis vinifera]
Length = 549
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDIRGRDASQHHNSGXPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIREHINSIRSGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVVGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILG W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGCTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147836394|emb|CAN68774.1| hypothetical protein VITISV_042251 [Vitis vinifera]
Length = 537
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
CAFH + H T CR+L+ +E LI G LK++++ + + +Q++ L + + S
Sbjct: 254 CAFHKEHGHTTETCRSLQYLVERLIKAGHLKQYLRSDAGGKVTSQHHNLGAPR---APSA 310
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFL 112
P+ ++N I P E ++R + I E + + L + + F
Sbjct: 311 PKAVINYINGGPSDEEYDSRRKRQKLLRATSIH--ERINSIRLGLTGGSPRPIDGTIIFP 368
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 369 PADPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASIVGHMGHSLAGLENPGR 428
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+ M+ +PSTYH
Sbjct: 429 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLQYMKAIPSTYH 488
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 489 QMVSFLTNKGQIDLYGSQLAARQC 512
>gi|147866484|emb|CAN79432.1| hypothetical protein VITISV_023379 [Vitis vinifera]
Length = 536
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 21/256 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPGAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M + E
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHGLAGLEN 437
Query: 173 P---LIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
P L GF+G T S G ++ VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 438 PGRILSGFNGSSTTSLGDII--LPVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTN 495
Query: 230 YGIEEIGGDQATTRTC 245
G ++ Q R C
Sbjct: 496 EGQTDLYXSQLAARQC 511
>gi|147810881|emb|CAN62963.1| hypothetical protein VITISV_021800 [Vitis vinifera]
Length = 549
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH+D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHSDHGHTTETCRSLQYLVERLIRAGHLKQYLRSDAGGRDASQHHNSGAPRXPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S+ IG+ VRR+L+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMGHSLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILG W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGGTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147765426|emb|CAN78106.1| hypothetical protein VITISV_014414 [Vitis vinifera]
Length = 534
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 251 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 307
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
P+ ++N I P E ++R + I P + +D +
Sbjct: 308 --PKAVINYINGGPSDEEYDSXRKRQKLLRAASIRERINSIRPGLXGEGPRPID--GTII 363
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D P DAL++S++IG+ VRRIL+B GSS +++ + V M ++
Sbjct: 364 FPPVDPTRTLQPXRDALILSLEIGDFDVRRILVBPGSSADLVQASVVGHMGHSLTGLENP 423
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 424 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 483
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 484 YHQMVSFLTDEGQTDLYGSQLAARQC 509
>gi|147775903|emb|CAN77967.1| hypothetical protein VITISV_027331 [Vitis vinifera]
Length = 491
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 51/256 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+L+ +E LI G LK++++ N + +++ P
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLR--------SNTGGRDASQHHNSGAP 317
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
V P P++ + F P D
Sbjct: 318 RAPVAPKAGPRPID--------------------------------GTIIFPPVDPTRTL 345
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 346 QPHCDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLASLENPGRILSGFNGS 405
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 406 STTSLGDIILPVQAGPVILNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTN 465
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 466 EGQTDLYGSQLAARQC 481
>gi|147837609|emb|CAN74763.1| hypothetical protein VITISV_010750 [Vitis vinifera]
Length = 549
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAEHLKQYLRSDTXGRDAXQHHNSGAPRTPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKVVINYINGGPSDEEYDSRRKREKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENPRR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRIWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTDEGQTDLYGSQLAARQC 524
>gi|147805420|emb|CAN67442.1| hypothetical protein VITISV_020355 [Vitis vinifera]
Length = 537
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR + +E LI G LK+++++++ Q+ N + +
Sbjct: 254 CAFHKDHGHTTETCRAFQYLVERLIKAGHLKQYLRLDNGXRNASQHHNPGAPR-----TP 308
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREI-EAPEEFSKKCVKLD---VQSEVSFL 112
+ P+ ++N I P E ++R + I E D + + F
Sbjct: 309 AAPKAVINYINRGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGGDPRPIDGTIIFP 368
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 369 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLMQASVVGHMGHTLTGLENPGR 428
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILG W+H M+ +PSTYH
Sbjct: 429 ILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNFILGHTWLHYMKAIPSTYH 488
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 489 QMVSFLTNDGQIDLYGSQLAIRQC 512
>gi|147862327|emb|CAN84020.1| hypothetical protein VITISV_032574 [Vitis vinifera]
Length = 543
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH H T CR+L+ +E LI G LK++ + + Q+ N+ + +
Sbjct: 266 CAFHKXHGHTTETCRSLQYLVERLIKAGHLKQYXRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147833356|emb|CAN66239.1| hypothetical protein VITISV_041839 [Vitis vinifera]
Length = 549
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
C FH + H T +CR L +E LI G LK++++ + + +NF +
Sbjct: 266 CVFHKEHGHTTEECRCLHYLVERLIRAGHLKQYLRSDAGGRDASRNHNF----GAPRAPV 321
Query: 59 EPEQIVNTIMAPLPLEVHMTKERN-----VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
P+ I+N I E + +K + V + I + + + + F P
Sbjct: 322 APKAIINYINGGPSDEEYDSKRKRQKLLRVASIRERINSIQPRITGGGPCPIDGTIIFPP 381
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D I PH D L++S++IG+ VRRIL+D GSSV+++ + V M +++ +
Sbjct: 382 VDPTRILQPHRDTLILSLEIGDFDVRRILVDPGSSVDLVQASVVSHMGHSLTRLENPGRI 441
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+ T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 442 LSGFNRSSTNSLGDIVLPVQASPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYHQ 501
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 502 MVSFLTKDGQIDLYGSQLAARQC 524
>gi|147777538|emb|CAN71571.1| hypothetical protein VITISV_042954 [Vitis vinifera]
Length = 514
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+L+ +E LI G LK++++ + Q NS +
Sbjct: 248 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLR-------SDTGGRDASQHHNSGAPR 300
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
Q +PL L R ++R + + + + + F P D
Sbjct: 301 PQ------SPLRLRKRQKLLRAASIRERINSIQPGLTGEGPR-PIDGTIIFPPVDPTRTL 353
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL+ S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+G
Sbjct: 354 QPHCDALIXSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGRILSGFNGS 413
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 414 STTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTN 473
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 474 EGQTDLYGSQLAARQC 489
>gi|147783766|emb|CAN70257.1| hypothetical protein VITISV_024386 [Vitis vinifera]
Length = 1032
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
C FH + H T +CR L +E LI G LK++++ + QN N + +
Sbjct: 749 CVFHKEHGHTTEECRCLHYLVERLIRVGHLKQYLRSDAGGKNASQNHNTGAPR-----AP 803
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK----LDVQSEVSFL 112
+ P+ ++N I P E ++R + + + + + + F
Sbjct: 804 TAPKAVINYINGGPSDEEYDSKRKRQKLLRAASVHERINSIRPGISGGGPRPIDGTIIFP 863
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D I PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 864 PVDSTRILHPHRDALILSLEIGDFDVRRILVDPGSSADLIQASVISHMGHSLTGLENPVR 923
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 924 ILSGFNGSSTTSLGDIVLLVQVGPVTLNVRFSVVQDLSPFNVILGRTWLHYMKGIPSTYH 983
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 984 QMVSFLTKDGQIDLYGSQLAARQC 1007
>gi|147818434|emb|CAN67289.1| hypothetical protein VITISV_006206 [Vitis vinifera]
Length = 549
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVMGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ P+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVRAGLVTLNVQFSVVQELPPFNIILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147859142|emb|CAN80403.1| hypothetical protein VITISV_041866 [Vitis vinifera]
Length = 482
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E+LI G LK++++ + + + + + P
Sbjct: 223 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHXPG--TPRAPAAP 280
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLP 113
+ ++N I P E ++R + I E + L + + F P
Sbjct: 281 KXVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTIIFPP 338
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ V+RIL+D GSS +++ + V M + E P
Sbjct: 339 VDPTRTLQPHRDALILSLEIGDFDVQRILVDLGSSADLVQASVVSHM---GHSLAGLENP 395
Query: 174 ---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PST
Sbjct: 396 VRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKVIPST 455
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 456 YHQMVSFLTNEGQIDLYGSQLAARQC 481
>gi|221271541|dbj|BAH15076.1| GAG-POL precursor [Vitis vinifera]
Length = 309
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
CAFH D H T CR+ + +E LI G LK++++ + + +Q+N + +T
Sbjct: 26 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRTDTGGRDVSQHNNPGAPRAPVAT-- 83
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQ 114
+ ++N I P E ++R + I + + + + + F P
Sbjct: 84 -KAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPV 142
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 143 DPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGRIL 202
Query: 175 IGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ+
Sbjct: 203 SGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQM 262
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ G Q R C
Sbjct: 263 VIFLTHDGQIDLYGSQLAARQC 284
>gi|147865017|emb|CAN83240.1| hypothetical protein VITISV_021676 [Vitis vinifera]
Length = 549
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T +CR L +E LI G LK++++ + + N + + P
Sbjct: 266 CVFHKEHGHTTEECRCLHYLVERLIKAGHLKQYLRSDARDRDASRN--PSSGAPRAPTAP 323
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCV----KLDVQSEVSFLPQD 115
+ I+N I P E ++R + + F + + + + F D
Sbjct: 324 KAIINYINGGPFDEEYDSKRKRQRLLRAASVRERVNFIRPGITGGGPRPIDGTIIFPLVD 383
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
I H D L++S++IG+ VRRIL+D GSS +++ + + M ++ + L
Sbjct: 384 PTRILQSHRDVLILSLEIGDFEVRRILVDPGSSTDLVQASVISHMGHSLTGLENPGRILS 443
Query: 176 GFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G +L F VV+ SP+N ILGR W+H M+V+PSTYHQ++
Sbjct: 444 GFNGASTTSLGDTVLSVQAGLVTLNLQFSVVQDLSPFNIILGRTWLHYMKVIPSTYHQMV 503
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G + G Q R C
Sbjct: 504 SFLTKDGQINLYGSQLAARQC 524
>gi|147838114|emb|CAN69666.1| hypothetical protein VITISV_013633 [Vitis vinifera]
Length = 446
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 28/247 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CA+H + H T CR+L +E LI G K++++ E + +++N+ K I
Sbjct: 202 CAYHKEHGHTTEQCRSLHYLVERLIKAGHPKQYIRSEARVGDTSRSRNSGTPKTPIT--- 258
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
P ++N I PL E ++R + I P +D +
Sbjct: 259 --PRVVINYIHGGPLNKEYDSKRKRQRLLQAASIRERVNSIQPGLTGGNAHPID--GIII 314
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D I PH DA ++S+ IG+ V+RIL+D+G+S ++L + +++M LE ++
Sbjct: 315 FPPVDPTRILQPHRDAFILSLGIGDFDVKRILVDSGNSTDLLQASIIKQMGLELSGLENP 374
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
Q L F+G T S G ++ F VV+ SP+NAILGR W+H M+V+PST
Sbjct: 375 GQILSRFNGAATTSLGDVVLPVQVGSVILNVQFSVVEDLSPFNAILGRTWLHYMKVIPST 434
Query: 220 YHQVLCY 226
YHQ++ +
Sbjct: 435 YHQMVSF 441
>gi|147811784|emb|CAN68191.1| hypothetical protein VITISV_025043 [Vitis vinifera]
Length = 386
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 32/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH + H T +CR L +E+LI G LK++++ + QN N +
Sbjct: 103 CAFHKEHGHTTEECRCLHYLVEKLIRAGHLKQYLRSDAGGRNASQNHNTGAPW-----AP 157
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSK-KCVKLDVQSE-------- 108
+ P+ ++N I E + +K + +++ ++A + ++ + E
Sbjct: 158 ATPKVVINYINGGPSDEEYDSKRK----RQKLLQAASVRERINSIRPGITGEGPCPIDGI 213
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F P D I PH DAL++S++IG+ VRRIL+D GSS +++ + + M +K
Sbjct: 214 IIFPPVDPTRILHPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLK 273
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L GF+G T S G ++ F VV+ S +N ILGR W+H M+V+P
Sbjct: 274 NPRRILSGFNGSSTTSLGDIVLPIQAGPVTLNVQFSVVQDLSTFNIILGRTWLHYMKVIP 333
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ++ + T G + G Q R C
Sbjct: 334 STYHQMVSFLTKDGQINLYGSQLVARQC 361
>gi|147811444|emb|CAN72220.1| hypothetical protein VITISV_020540 [Vitis vinifera]
Length = 549
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH D H T CR + +E LI G LK++++ ++ + Q+ N + +
Sbjct: 266 CVFHKDHGHTTETCRAFQFLVERLIKAGHLKQYLRSDNGERDASQHHNPGAPR-----AP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ I+N I +P E ++R + I E + L + +
Sbjct: 321 TAPKAIINYINGSPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG VRRIL++ GSS +++ + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGGFDVRRILVNPGSSADLIQASVASHMGHSLTVLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
Q L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GQILSGFNGSSTISLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFITSEGQIDLYGSQLAARQC 524
>gi|147846798|emb|CAN82733.1| hypothetical protein VITISV_028707 [Vitis vinifera]
Length = 515
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR L +E+LI G LK++++ + + PQN N+ + +
Sbjct: 232 CAFHKDHGHTTETCRCLHFLVEKLIKAGHLKQYLRSDARGRDVPQNPNSGAPR-----AP 286
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ + ++N I P E ++R + + I + + + + F
Sbjct: 287 ATTKAVINYINGGPSDEEYDFRRKRQRLLRATSVRERINSIRPGLTRGGPRPIDGTIIFP 346
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IGN VR IL+D GSS +++ + V M ++ +
Sbjct: 347 PVDPTRTLQPHRDALILSLEIGNFDVRHILVDPGSSADLVQASVVSHMGHSLAGLENPGR 406
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +P TYH
Sbjct: 407 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPFTYH 466
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G+Q C
Sbjct: 467 QMVSFLTNDGQIDLYGNQLAACQC 490
>gi|147853078|emb|CAN79086.1| hypothetical protein VITISV_027045 [Vitis vinifera]
Length = 537
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR+ + +E LI G LK++++ + + NN +
Sbjct: 254 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRTDTGGRDVSKHNN----PGVPRVPV 309
Query: 59 EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLP 113
+ I+N I P E ++R + I + + + + + F P
Sbjct: 310 ASKAIINYITGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPP 369
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
+ PH DAL++S++IG+ VRRIL+D GSS +++ + V +M ++ +
Sbjct: 370 VNPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGRMGHSLAGLENPGRI 429
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 430 LSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQ 489
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 490 MVSFLTNEGQIDLYGSQLAARQC 512
>gi|147844181|emb|CAN82688.1| hypothetical protein VITISV_006268 [Vitis vinifera]
Length = 531
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 122/259 (47%), Gaps = 32/259 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR+L+ +E LI G LK+ + V K N N D+ +S
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQAPRXPVAPKXVINYINGGPSDEEYDSRR 325
Query: 59 EPEQIVNTIMAPLPLEVHMTKER-NVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ +++ L +ER N E P + + F P D
Sbjct: 326 KRQKL---------LWAASIRERINSIRPGLTGEGPRP---------IDGTIIFPPVDPT 367
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF
Sbjct: 368 RTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENPGRILSGF 427
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ +
Sbjct: 428 NGSSTTSIGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSF 487
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 488 LTNEGQTDLYGSQLAARQC 506
>gi|147833065|emb|CAN77474.1| hypothetical protein VITISV_007258 [Vitis vinifera]
Length = 537
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 18/255 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRALQYLVERLIKVGHLKQYLRSDAGGRDASQHHNSGTPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
P+ ++N I P E ++R + + I + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASVRERINSIRPGLTGGSPCPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH D L++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDTLILSLEIGDFDVRRILVDPGSSADLIQASVVSHMGHSLTGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLLTDFLVVKAT--SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
L GF+G T S G ++ L V+A SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 441 ILSGFNGSSTTSLGDIV---LPVQAGPLSPFNIILGRTWLHYMKAIPSTYHQMVSFLTKD 497
Query: 231 GIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 498 GQIDLYGSQLAARQC 512
>gi|147867409|emb|CAN81179.1| hypothetical protein VITISV_004999 [Vitis vinifera]
Length = 549
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR+L+ +E+LI G LK++++ E K +N + +
Sbjct: 266 CVFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHN----PGTPRAPA 321
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVSF 111
P+ ++N I P + ++R + I P +D + F
Sbjct: 322 APKAVINYINGGPSDEKYDSRRKRQKLLRAASIRERINSIRPGLIGGSPRPID--XTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+D GSS +++ V M ++
Sbjct: 380 PPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQATVVSHMGHSLAGLENPG 439
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 440 RILSGFNGSSTTSLGDIVLPVQASPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTY 499
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 500 HQMVSFLTNEGQIDLYGSQLAARQC 524
>gi|47232550|dbj|BAD18985.1| GAG-POL precursor [Vitis vinifera]
Length = 549
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
CAFH D H T CR+ + +E LI G LK++++ + + +Q+N + +T
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRTDTGGRDVSQHNNPGAPRAPVAT-- 323
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFL 112
+ ++N I P E ++R + I E + L + + F
Sbjct: 324 -KAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVIFLTHDGQIDLYGSQLAARQC 524
>gi|147845799|emb|CAN82192.1| hypothetical protein VITISV_017992 [Vitis vinifera]
Length = 549
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH + H T +CR L +E LI LK++++ + QN N+ K +
Sbjct: 266 CAFHKEHGHTTEECRCLHYLVERLIRAVHLKQYLRSKAGGRDASQNHNSRAPK-----AL 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E ++R V + I + + + + F
Sbjct: 321 AAPKVVINYINGGPSDKEFDSKRKRQKLLRVASVRERINSIRPGLTRGGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 PIDPTRTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQASVVSYMGHSLTGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F +V+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIVLSIQAGPVTLNVQFSMVQDLSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T ++ G Q TR C
Sbjct: 501 QMVSFLTKDAQIDLYGSQLATRQC 524
>gi|147790282|emb|CAN63321.1| hypothetical protein VITISV_032615 [Vitis vinifera]
Length = 549
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 26/265 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHXTETCRSLQYLVERLIKAGHLKQYLRSDTXXRDXSQHHNSGAXRAPVA--- 322
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
P+ ++N I P + R R E + L + + F
Sbjct: 323 --PKAVINYING-GPSDEEYDXXRKXQKLLRXASIRERINSIRPGLXGEGPRPIDGTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+B SS +++ + V M ++
Sbjct: 380 PPVDPTRTLQPHRDALILSLEIGDFDVRRILVBPXSSADLVQASVVGHMGHSLAGLENPG 439
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 440 RILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKXIPSTY 499
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 500 HQMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147794165|emb|CAN64459.1| hypothetical protein VITISV_008319 [Vitis vinifera]
Length = 540
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
C FH + H T CR L +E LI G LK++++ + +N N+ + +
Sbjct: 257 CVFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLRSDAGGRDASRNHNSGAPRAXVV--- 313
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERN-----VYCKKREIEAPEEFSKKCVKLDVQSEVSFL 112
P+ ++N I E + +K + ++ + + + + + FL
Sbjct: 314 --PKVVINYINGGPSDEEYDSKRKRQKLLWAASVRKRVNSIRPRMTEGGPRPINGTIIFL 371
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D I PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 372 PVDPTWILHPHCDALILSLEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLENPGR 431
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F +V+ SP+N ILGR W++ M+ +PSTYH
Sbjct: 432 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSMVQDLSPFNVILGRTWLYYMKSIPSTYH 491
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q TR C
Sbjct: 492 QMVSFLTKDGQIDLYGSQLATRQC 515
>gi|147843105|emb|CAN81206.1| hypothetical protein VITISV_020911 [Vitis vinifera]
Length = 549
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
C FH D H T CR+L+ +E LI G LK +++ + Q+ N+ + +
Sbjct: 266 CXFHKDHGHTTETCRSLQYLVERLIKAGHLKXYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGXIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D SS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPXSSADLVQASVVGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPITLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNEGQTDLYGSQLAARQC 524
>gi|147843985|emb|CAN79434.1| hypothetical protein VITISV_043196 [Vitis vinifera]
Length = 549
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHITETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGDPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D G+S +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGNSADLVQASVIGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+ T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNRSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTDEGQTDLYGSQLAARQC 524
>gi|147795070|emb|CAN67429.1| hypothetical protein VITISV_004709 [Vitis vinifera]
Length = 477
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 19/245 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR+L +E+LI G LK++++ + N + + P
Sbjct: 227 CAYHKEHDHTTEACRSLHYLVEKLIRAGHLKQYLRSDAGGRXASRN--HNSGTPTAPAAP 284
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA-----PEEFSKKCVKLDVQSEVSFLPQ 114
+ I+N I P E ++R + + P + + + F P
Sbjct: 285 KAIINYINGCPFDEEYDSKRKRQKLLRAXSMREHVNSIPLGITGGGGACPIDGTIIFPPV 344
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D I PH D L++S++IG+ VR IL+D GSS +++ + + M ++ + L
Sbjct: 345 DPTRILQPHRDTLILSLEIGDFDVRLILVDPGSSXDLVQASVISHMGRSLTGLENPRRIL 404
Query: 175 IGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G ++ FLVV+ SP+N ILGR W+H M+ +PSTYHQ+
Sbjct: 405 SGFNGASTTSLGDIVLPVQAXPVTLNVQFLVVQDLSPFNVILGRTWLHYMKAIPSTYHQM 464
Query: 224 LCYQT 228
+ + T
Sbjct: 465 VSFLT 469
>gi|147863023|emb|CAN82985.1| hypothetical protein VITISV_030340 [Vitis vinifera]
Length = 534
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 32/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED-----KQPQNQNNFLKKDQIEN 55
CAFH D H T CR+ + +E LI G LK++++ + Q N N
Sbjct: 266 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDSGRRDTHQHHNPGNL-------R 318
Query: 56 STSEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSE 108
+ + P+ ++N I P E ++R + I E + +L +
Sbjct: 319 APAAPKAVINYITGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPRLTEEGPRPINGT 376
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F P D H DAL++S++IG+ VRRILID GSS +++ + V M ++
Sbjct: 377 IIFPPVDPTRTLQQHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLE 436
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L F+G T S G ++ F VV+ SP+N ILGR W+H M+ +P
Sbjct: 437 NPGRILSRFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIP 496
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ++ + T G ++ G Q R C
Sbjct: 497 STYHQMVSFLTNDGQIDLYGSQLAARQC 524
>gi|147855528|emb|CAN79601.1| hypothetical protein VITISV_015421 [Vitis vinifera]
Length = 505
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR L+ +E LI G LK++++ + + PQ+ N +
Sbjct: 224 CAFHKDHGHTTETCRALQYLVERLIKAGHLKQYLRSDTRGRDVPQHHNPGAPRAPAAPKV 283
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
++N I P E ++R + I + + + + + F
Sbjct: 284 -----VINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 338
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
D PH DAL++S++IG+ VRRIL+D G+S +++ + V M ++ E
Sbjct: 339 LVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGNSADLVQASVVSHM---GHRLTGLEN 395
Query: 173 P---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPS 218
P L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PS
Sbjct: 396 PGRILSGFNGSSTTSLGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPS 455
Query: 219 TYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRNQPWKK 267
TYHQ++ + T G ++ G Q R + +N+ G R PW +
Sbjct: 456 TYHQMVSFLTNEGQIDLYGSQLVARPMLPDSTRSRNQPRG--RIFPWAQ 502
>gi|147839217|emb|CAN70205.1| hypothetical protein VITISV_028313 [Vitis vinifera]
Length = 481
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 26/258 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR L +E LI G LK++++ + + +NF + +
Sbjct: 236 CVFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLRSDAGGRDASRNHNF----GALRAPA 291
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
P+ ++N I E + ++ + P + + F P DL
Sbjct: 292 APKAVINYINGGPSDEDIGAQACQLHPAWDDWGGPRP---------IDGTIIFPPIDLTQ 342
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+
Sbjct: 343 ILHPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHNLIGLENPGRILFGFN 402
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T S G ++ F VV+ SP+N ILG W+H M+V+PSTYHQ++ +
Sbjct: 403 GSSTTSLGDIVLPVQAGPVILNVQFSVVQDLSPFNVILGCTWLHYMKVIPSTYHQMVSFL 462
Query: 228 TIYGIEEIGGDQATTRTC 245
T ++ G Q R C
Sbjct: 463 TKDRQIDLYGSQLAARQC 480
>gi|147846809|emb|CAN82731.1| hypothetical protein VITISV_022899 [Vitis vinifera]
Length = 506
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 34/269 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE----DKQPQNQNNFLKK------ 50
CAFH D H T CR+L+ +E LI G LK++++ + D + + L+
Sbjct: 223 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGKDASQHHNSGALRAPATPKA 282
Query: 51 --DQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREI-EAPEEFSKKCVKLDVQS 107
+ I +S+ E M L L +ER + I E P +
Sbjct: 283 VINYINEGSSDEEYDFRRKMQKL-LRAASIRERINSIRPGLIGEGPRP---------IDG 332
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+ F P D PH +A ++S++IG+ VRRILID GSS +++ + V M +
Sbjct: 333 TIIFPPVDSTRTLQPHRNAFILSLEIGDFDVRRILIDPGSSADLVQASIVSHMGHSLTDL 392
Query: 168 KPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVV 216
+ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +
Sbjct: 393 ENPRRILSGFNGSSTTSLGDIVLSVQAGPVTRNVQFSVVQKLSPFNIILGRTWLHYMKAI 452
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
PSTYHQ++ + T G ++ Q R C
Sbjct: 453 PSTYHQLVSFLTNEGQIDLYSSQLAVRQC 481
>gi|147810387|emb|CAN67629.1| hypothetical protein VITISV_040829 [Vitis vinifera]
Length = 490
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 37/262 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
C H + H T CR L +E I G LK++++ +D+ QN N+ + +
Sbjct: 239 CVLHKEHGHTTETCRCLHYLVERFIKAGHLKQYLRSDDEGRDASQNHNSGGPR-----AP 293
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
S P+ ++N I E + +K + +++ + A + + F D
Sbjct: 294 SAPKAVINYINGGPSDEKYDSKRK----RQKLLRA--------ALVREHGTIIFPLVDPT 341
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP---L 174
I PH DAL++S++I + VRRIL+D+GSS +++ + V M + + E P L
Sbjct: 342 RILQPHHDALILSLEIRDFDVRRILVDSGSSADLVQASVVNHM---EHSLTGLENPGRLL 398
Query: 175 IGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ+
Sbjct: 399 SGFNGSSTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQM 458
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ G Q R C
Sbjct: 459 VSFLTKDGQIDLYGSQLAARQC 480
>gi|147858403|emb|CAN81407.1| hypothetical protein VITISV_007847 [Vitis vinifera]
Length = 504
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 24/258 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR+L+ +E+LI G LK++++ E K +N +
Sbjct: 233 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHNPGAPRAPAAPKA 292
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
E + K + I + + + F P D
Sbjct: 293 EYDS-----------RRKRQKLLRAASIRERINSIRSGLTGGGPRPIDGTIIFPPVDPTR 341
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
PH DAL++S++IG+ VRRIL+D GSS +++ + V M +K + L GF+
Sbjct: 342 TLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLVGLKNPGRILSGFN 401
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ +
Sbjct: 402 GSSTTSLGDIVLSVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKVIPSTYHQMVSFL 461
Query: 228 TIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 462 TNEGQIDLYGSQLAARQC 479
>gi|4417309|gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 889
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F ++ + PHDDALVI I +GN + I++D GSSV++L ++ K++
Sbjct: 47 ITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQ 106
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ PL GF+G T+S G++ LT+FLVV +P+NAILGR W+H M+ VP
Sbjct: 107 GRKTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVP 166
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTC 245
STYHQ + + + GI + G Q ++R C
Sbjct: 167 STYHQCIKFPSYKGIAVVYGSQRSSRKC 194
>gi|147858903|emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
Length = 508
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH + H T +CR L +E LI G LK+++ + + QN N+ + I
Sbjct: 225 CVFHKEHDHTTEECRCLHFLVERLIKVGHLKQYLHSDAESRNTSQNHNSGAPRAPIA--- 281
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERN-----VYCKKREIEAPEEFSKKCVKLDVQSEVSFL 112
P+ ++N I E + +K + + I + + + F
Sbjct: 282 --PKAVINYINEGPSDEEYASKRKRQKLLRAASVRERINSIRSGLTGGGPRPIDGTIIFP 339
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH AL++S++IG+ VRRIL+D GSSV+++ + V +M ++ +
Sbjct: 340 PVDPTWTLQPHRGALILSLEIGDFDVRRILVDPGSSVDLVQASVVGRMGHSLTSLENPRR 399
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ S +N ILGR W+H M+ +PSTYH
Sbjct: 400 ILPGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSSFNVILGRTWLHYMKAIPSTYH 459
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 460 QMVSFLTKDGQIDLYGSQLAARQC 483
>gi|147773059|emb|CAN69410.1| hypothetical protein VITISV_012162 [Vitis vinifera]
Length = 523
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAF + H CR+L+ +E LI G LK++++++ Q+ N + +
Sbjct: 240 CAFXKEQGHTIEACRSLQYLVERLIKAGHLKQYIRLDAGGKITSQHHN-----PEAPRAP 294
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
+ P+ ++N I P ++R + I P +D +
Sbjct: 295 TXPKAVINYINGDPSDEXYDFMRKRQKLLRAASIRXRINSIXPGLXGGSPRPID--GTII 352
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VR IL+D GSS +++ + V M ++
Sbjct: 353 FPPVDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGHMGHSLTSLENP 412
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PST
Sbjct: 413 GRILSGFNGSYTTSLGDIILPVKAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPST 472
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 473 YHQMVSFLTDEGQIDLYGSQLAARQC 498
>gi|147798487|emb|CAN72191.1| hypothetical protein VITISV_037821 [Vitis vinifera]
Length = 549
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR+L+ +E+LI G LK++++ E K +N +
Sbjct: 266 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYIRSDTEGKVTSQHHNPGAPRAPAAPKA 325
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
++N I P E ++R + I E + + L + + F
Sbjct: 326 ----VINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRLGLTGGGPRPIDGTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH D L++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 380 PPVDPTRKLQPHRDTLILSLEIGDFDVRRILVDPGSSADLIQASVISHMGHSLTSLENPG 439
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T G ++ F VV+ SP+N ILGR W+H M+V+PSTY
Sbjct: 440 RILSGFNGSSTTFLGDIVLPVQAGPITLNVQFSVVQELSPFNIILGRTWLHYMKVIPSTY 499
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 500 HQMVSFLTNKGQIDLYGSQLAARQC 524
>gi|3377834|gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
gi|7267161|emb|CAB77873.1| putative transposon protein [Arabidopsis thaliana]
Length = 681
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFV--KVEDKQPQNQNNFLKKDQIENSTS 58
C +H + T +CR +KK I + G+ K+ KVE P Q Q + +
Sbjct: 386 CKYHKKRGYSTEECRAVKKLI---AAGGKTKKGSNPKVETPPPDEQEEEQTPKQKKRERT 442
Query: 59 EPEQIVNTIMAP------LPLEV---------HMTKER-------------NVYCKKREI 90
PE I AP PL + H++ +R ++ K
Sbjct: 443 -PEGITTPPPAPHKKNMRFPLRLLKFCRSATEHLSPKRIDFIMGGSQLCNDSINSIKTHQ 501
Query: 91 EAPEEFSK-KCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSV 149
+ ++K K + +++F + + PHDDALVI I +GN + I+ID GSSV
Sbjct: 502 RKADSYTKGKSPMMGPNHQITFWESETTDLNKPHDDALVIRIDVGNYELSHIMIDTGSSV 561
Query: 150 NILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKAT 198
++L ++M +++ + PL GF+G T+S G++ LT FLVV
Sbjct: 562 DVLFYDAFKRMGHLDSELQGRKTPLTGFAGDTTFSLGTIQLPTIARGVRRLTSFLVVNKK 621
Query: 199 SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
+P+NAILGR W+H M+ VPSTYHQ + + + GI + A
Sbjct: 622 APFNAILGRPWLHAMKAVPSTYHQCIKFPSDKGIAVVSAANA 663
>gi|147860808|emb|CAN81064.1| hypothetical protein VITISV_000727 [Vitis vinifera]
Length = 515
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 30/268 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
CAFH + H T CR L +E LI G LK+++ ++ QN N+ +
Sbjct: 244 CAFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLLLDVGGRDASQNHNS-----GAPRAP 298
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ P+ ++N I P E +ER I + + + F P D
Sbjct: 299 AAPKAVINYINGGPSDEEAASVRER--------INSIRPGLTGGGPRPIDGTIIFPPVDP 350
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L G
Sbjct: 351 TRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENLGRILSG 410
Query: 177 FSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S G ++ F VV+ P+N ILGR W+H M+ +PSTYHQ++
Sbjct: 411 FNGSSTTSLGDIVLTVQVGPVTLNVQFSVVQDLLPFNVILGRTWLHYMKAIPSTYHQMVS 470
Query: 226 YQTIYGIEEIGGDQATTRTC--ASNGMG 251
+ T G ++ G Q R C + G+G
Sbjct: 471 FLTNDGQIDLYGSQLAARQCYQIARGVG 498
>gi|147852095|emb|CAN82275.1| hypothetical protein VITISV_040384 [Vitis vinifera]
Length = 527
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 244 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 300
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 301 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 358
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D G+S +++ + V M ++ +
Sbjct: 359 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGNSTDLVQASVVGHMGHSLAGLENPGR 418
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+ T S G ++ F VV+ SP+N ILG W+H M+ +PSTYH
Sbjct: 419 ILSGFNRSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGCTWLHYMKAIPSTYH 478
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 479 QMVSFLTNDGQTDLYGSQLAARQC 502
>gi|4836930|gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
Length = 1295
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 36/271 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEF--------------VKVEDKQPQNQNN 46
C H H T+D + L + + + G++ + + E P N+
Sbjct: 331 CEIHKMNGHATKDYKALGRLLAAKFASGEIHDIDVTTIDLAQTAYDVLDFEISSPPNKKQ 390
Query: 47 FLKKDQIENSTSEPEQIVNTIMAPLPL---EVHMTKERNVYCKKREIEAPEEFSKKCVKL 103
K + + P+++V IM L V K+ +R++ AP K ++
Sbjct: 391 --KNEPAPVTPKGPKKMVKVIMGGSKLFRDSVSAIKQH-----ERKVVAPVAKRPKTNQI 443
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D E+SF ++ + PHDDALVIS+ +GNC V+R+LID GSSV+++ T+ +M +
Sbjct: 444 DC-PEISFSEEETSDLDKPHDDALVISLDVGNCEVQRVLIDTGSSVDLIFLDTLVRMGIS 502
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTDFLVVKATSPYNAILGRQWIHK 212
+ IK PL+ F+ VT + +F V + YN ILG W+++
Sbjct: 503 KKDIKGALSPLVSFTSETSMLLRTITLPVTAQGIVKMIEFTVFDRPAAYNIILGTPWLYE 562
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTR 243
M+ VPSTYHQ + + T G+++I G Q T+R
Sbjct: 563 MKAVPSTYHQCVKFPTPTGVKQILGSQRTSR 593
>gi|147812662|emb|CAN68370.1| hypothetical protein VITISV_027470 [Vitis vinifera]
Length = 549
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T R+L+ +E LI G LK++++ E Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETYRSLQYLVERLIKAGHLKQYLRSETGGRDASQHHNSXAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ +++ I P E ++R + I + + + + + F
Sbjct: 323 --PKAVISYINGGPSDEEYDSRRKRQKLLRAASIREXINSIRSGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DA ++S++IG+ VRRIL+D SS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHRDAHILSLEIGDLDVRRILVDPDSSADLVQASVVGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTNDGQTDLYGSQLAARQC 524
>gi|147838530|emb|CAN67675.1| hypothetical protein VITISV_020901 [Vitis vinifera]
Length = 508
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 49/256 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H CR+L+ +E LI G LK++ +Q L+ I +
Sbjct: 266 CAFHKDHGHTXETCRSLQYLVERLIKAGHLKQYDSRRKRQ-----KLLRAASIRERINSI 320
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ T P P++ + F P D
Sbjct: 321 RPGL-TXXGPXPID--------------------------------XTIIFPPVDPTRTL 347
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL+JS++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 348 QPHRDALIJSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENPGRILSGFNGS 407
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 408 STTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTN 467
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 468 DGQTDLYGSQLAARQC 483
>gi|147769760|emb|CAN70062.1| hypothetical protein VITISV_025666 [Vitis vinifera]
Length = 491
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 32/258 (12%)
Query: 3 FHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK----VEDKQPQNQNNFLKKDQIENSTS 58
FH + H T CR L +E LI G LK+++ V K N N D+ +S
Sbjct: 247 FHKEHGHTTETCRCLHYLVERLIRAGHLKQYLHSDAGVAPKAVINYINGGSSDEKYDSKR 306
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
+ +++ L + ER + R E + + F P D
Sbjct: 307 KRQKL---------LRATLVCERVNSIRPRVTEGGPR--------PIDGTIIFPPVDPTR 349
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH +AL++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+
Sbjct: 350 ILHPHRNALILSLEIGDFDVRRILVDPGSSTDLVQASIISHMGHNLTGLESPGRILSGFN 409
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ +
Sbjct: 410 GSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFL 469
Query: 228 TIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 470 TKDGQIDLYGSQLAARQC 487
>gi|147852879|emb|CAN83382.1| hypothetical protein VITISV_024224 [Vitis vinifera]
Length = 463
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 33/256 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H + H T CR L +E+LI G LK++++ + + N + + P
Sbjct: 213 CVYHKEHGHTTEACRCLHYLVEKLIRAGHLKQYLRSDARGRDASRN--HNSGTPRAPAAP 270
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ I+N I + EE+ K + + S D I
Sbjct: 271 KAIINYI--------------------NRGPSNEEYDSKRKRQRLLRAASVHELDPTRIL 310
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S+ IG+ VRRIL+D GSS +++ + + M ++ + L GF+G
Sbjct: 311 QPHRDALILSLDIGDFDVRRILVDPGSSTDLVQASVISHMGHSLTGLENPGRILSGFNGA 370
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ FLVV+ SP+N ILG W++ M+ +PSTYHQ++ + T
Sbjct: 371 STTSLGDIVLPVQASPVTLNVQFLVVEDLSPFNVILGWTWLYYMKAIPSTYHQMVSFLTE 430
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 431 DGQIDLYGSQLAARQC 446
>gi|147769062|emb|CAN61407.1| hypothetical protein VITISV_039734 [Vitis vinifera]
Length = 549
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAF+ D H T CR + +E LI G LK++++ ++ Q+ N +
Sbjct: 266 CAFYKDHGHTTETCRAFQYLVERLIKAGHLKQYLRSDNGGRDASQHHNPGXPRAPAAPKA 325
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVS 110
++N I P E ++R + I E + L + +
Sbjct: 326 -----VINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSSV+++ V M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQALVVSHMGHSLTGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSGFNGSSTTSLGDIVLPVQADPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTNEGHIDLYGSQLAARQC 524
>gi|147771297|emb|CAN76249.1| hypothetical protein VITISV_015056 [Vitis vinifera]
Length = 549
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH D + T CR+L+ +E LI LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGNTTETCRSLQYLVERLIKARHLKQYLRSDXXGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 379 FPPADPIRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L F+G T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 439 GRILSXFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 499 YHQMVSFLTDEGQTDLYGSQLAARQC 524
>gi|147775800|emb|CAN62718.1| hypothetical protein VITISV_035362 [Vitis vinifera]
Length = 549
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+L+ +E LI G LK++++ D ++ + + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVESLIKTGHLKQYLR-SDTGGRDVSQHHNSEAPXPPVAPK 324
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQDL 116
I P E ++R + I + + + + + F P D
Sbjct: 325 AVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRSGLTGEGPRPIDGTIIFPPVDP 384
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ + L G
Sbjct: 385 TRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVIGHMGHSLVGLENPGRILSG 444
Query: 177 FSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S G ++ F VV+ SP+N ILGR W++ M+ +PSTYHQ++
Sbjct: 445 FNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLNYMKAIPSTYHQMVS 504
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 505 FLTNEGQTDLYGSQLAARQC 524
>gi|147816415|emb|CAN70763.1| hypothetical protein VITISV_028036 [Vitis vinifera]
Length = 506
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+ + +E LI G LK++++ + + PQ+ N + +
Sbjct: 223 CAFHKDHGHTTETCRSFQYLVERLIKAGHLKQYLRSDSGRRDTPQHHNPGNLR-----AP 277
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
+ P+ ++N I P E ++R + I + + + + + F
Sbjct: 278 AAPKAVINYITGGPSDEEYDSRRKRQRLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 337
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + + ++ +
Sbjct: 338 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVMSHIGHTLTGLENPGR 397
Query: 173 PLIGFSGIVTYSDGSLLTDF-----------LVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ V + SP+N ILG W+H M+ +PSTYH
Sbjct: 398 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQSSVAQELSPFNVILGHTWLHYMKAIPSTYH 457
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 458 QMVSFLTNDGQIDLYGSQLAARQC 481
>gi|147778224|emb|CAN76478.1| hypothetical protein VITISV_028118 [Vitis vinifera]
Length = 517
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR + +E LI G LK++++ ++ Q+ N +
Sbjct: 234 CAFHKDHGHTTETCRAFQYLVERLIKAGHLKQYLRSDNGGRDVSQHHNPGAPRAPAAPKV 293
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVS 110
++N I P E ++R + I E + L + +
Sbjct: 294 -----VINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 346
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V+ M ++
Sbjct: 347 FPPVDPTWTLQPHRDALILSLEIGDFDVRRILVDLGSSADLVQASVVDHMGHSLTGLENP 406
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+ T S G ++ F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 407 GRILSGFNESSTTSLGDIVLPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPST 466
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 467 YHQMVSFLTNNGQIDLYGSQLAARQC 492
>gi|147805360|emb|CAN71958.1| hypothetical protein VITISV_011548 [Vitis vinifera]
Length = 528
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 28/280 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
C +H + H T CR+L +E LI+ G LK++++ + + +N N+ + +
Sbjct: 245 CVYHKEHGHTTETCRSLHYLVERLINVGHLKQYLRSDARVRDTSRNHNSGTSRIPVA--- 301
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK----LDVQSEVSFL 112
P+ ++N I PL E ++R + + + + + + F
Sbjct: 302 --PKAVINYIHGGPLDEEYDSKRKRQRLLRAASVRERVNSIRPGIAGGSPRPIDGTIVFP 359
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P L + AL++S+++G+ VR IL+D GSSV+ L + + M + ++ +
Sbjct: 360 PSRLHTDITTAPRALILSLEMGDFDVRCILVDPGSSVDFLQASVISHMGRDLTGLENLGR 419
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 420 ILSGFNGAATTSLGDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYH 479
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC----ASNGMGKQNREL 257
Q++ + G ++ G Q R C G ++NR L
Sbjct: 480 QMVSFLAEDGQIDLYGSQLAARQCYQIVREAGTSQENRSL 519
>gi|147826524|emb|CAN68506.1| hypothetical protein VITISV_034994 [Vitis vinifera]
Length = 549
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR + +E LI LK++++ + + NN +
Sbjct: 266 CAFHKNHGHTTETCRVFQFLVERLIKAEHLKQYLRTDTGGRDVSQHNN----PGAPRAPV 321
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
P+ ++N I P E ++R V + I + + + F P
Sbjct: 322 APKAVINYINGGPSDEEYDSRRKRQKLLRVASIRERINSIRPGLTGGGPRPIDGTIIFPP 381
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++ ++IG+ VRRILID GSS + + + V M ++ +
Sbjct: 382 VDPTRTLQPHRDALILFLEIGDFDVRRILIDPGSSADFVQASVVSHMGHTLTGLENPGRI 441
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ
Sbjct: 442 LSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQKLSPFNVILGRTWLHYMKAIPSTYHQ 501
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 502 MVSFLTNDGQIDLYGSQLVARQC 524
>gi|147772906|emb|CAN64575.1| hypothetical protein VITISV_003432 [Vitis vinifera]
Length = 504
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 16/254 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E+LI G LK++++ + K + + + P
Sbjct: 254 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTKGKVTSQH--HNPGAPRAPAAP 311
Query: 61 EQIVNTI-MAPLPLEVHMTKERN------VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
+ I+N I P E ++R C++ P +D + F P
Sbjct: 312 KAIINYINGGPSDEEYDSRRKRQKLLRVASICERINSIRPGLTGGGPCPID--GTIIFPP 369
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ +R IL+D GSS +++ + V M ++ Q
Sbjct: 370 VDPTRTLQPHRDALILSLEIGDFDMRHILVDPGSSTDLVQASVVAHMGHSLAGLENPRQI 429
Query: 174 LIGFSGIVTYSDGSLLTDFLVVKAT--SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
L FSG T S G ++ L V+A SP+N ILGR W+H M+V+PSTYHQ++ + T G
Sbjct: 430 LSEFSGSSTTSLGDII---LPVQAGPLSPFNIILGRTWLHYMKVIPSTYHQMVSFLTNEG 486
Query: 232 IEEIGGDQATTRTC 245
++ G Q R C
Sbjct: 487 QIDLYGSQLAARQC 500
>gi|4406792|gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 764
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 38 DKQPQNQNNFLKKDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREI---EAPE 94
D +P +N + DQ N P + VN IM L T R+ + +E A
Sbjct: 266 DMEPPKKNR--ENDQQHNDAPVPRRRVNMIMGGL------TACRDSFRSIKEYIKSGAAT 317
Query: 95 EFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDD 154
+S K + ++F +DL + PH+D LVI + IG V RILID GSSVN++
Sbjct: 318 LWSSPATK--EMTPLTFTSEDLFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFK 375
Query: 155 ATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNA 203
++KM++ IKP +PL GF G ++G++ F+VV + YN
Sbjct: 376 DVLQKMKVHDRHIKPSVRPLTGFDGNTMMTNGTIKLPIYLGGAATWHKFVVVDKPTIYNI 435
Query: 204 ILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
ILG WIH M+ +PS+YHQ + T GIE I G+Q
Sbjct: 436 ILGTPWIHDMQAIPSSYHQCIKIPTSIGIETIRGNQ 471
>gi|147778589|emb|CAN64616.1| hypothetical protein VITISV_036197 [Vitis vinifera]
Length = 539
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQN-------NFLKK 50
CAFH D H CR + +E LI G LK++++ ++ Q+ N +
Sbjct: 244 CAFHKDHGHTIETCRAFQFLVERLIKAGHLKQYLRSDNGGRDASQHHNPGAPRAPAAPRA 303
Query: 51 DQIENSTSEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------ 103
+ + P+ ++N I P E ++R + I E + +L
Sbjct: 304 PAAPRAPAAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPRLTGGGPR 361
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 362 PIDGTIIFPPIDPARTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHS 421
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHK 212
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H
Sbjct: 422 LTGLENPGRILSGFNGSSTTSXGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHY 481
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
M+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 482 MKAIPSTYHQMVSFLTNEGQIDLYGSQLVARQC 514
>gi|147765695|emb|CAN60197.1| hypothetical protein VITISV_019179 [Vitis vinifera]
Length = 486
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR+L+ +E+LI G LK++++ E K +N + +
Sbjct: 203 CVFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHN----PGTLRAPA 258
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
P+ ++N I P E ++R + I E + L + + F
Sbjct: 259 APKAVINYINGGPSDEEYDSKRKRQKLLRAASIR--ERINSIRXGLIGRGPRPIDGTIIF 316
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++I + VRRIL+D GSS +++ + V M ++
Sbjct: 317 PPVDPTRTLQPHRDALILSLEIRDFDVRRILVDPGSSADLIQASVVSHMGHSLTGLENPG 376
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ S +N ILGR W+H M+ +PSTY
Sbjct: 377 RILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSLFNIILGRTWLHYMKAIPSTY 436
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 437 HQMVSFLTNEGQIDLYGSQLAARQC 461
>gi|147780874|emb|CAN74913.1| hypothetical protein VITISV_016245 [Vitis vinifera]
Length = 455
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
CAFH + H T C L +E+LI G LK++++ + + PQN+N+ + +
Sbjct: 193 CAFHKEHGHTTETCMCLHFLVEKLIKAGHLKQYLRSDAGGXEVPQNRNS-----EAPRTP 247
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ P+ + L +ER I + + + F P D
Sbjct: 248 AAPKAKL--------LRAASVRER--------INSIRPGLNGGGPRPIDETIIFPPVDPT 291
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + + GF
Sbjct: 292 QTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHNLAGLENPGRIMSGF 351
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ +
Sbjct: 352 NGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSF 411
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q C
Sbjct: 412 LTNEGQIDLYGSQFAAHQC 430
>gi|147839135|emb|CAN61391.1| hypothetical protein VITISV_014768 [Vitis vinifera]
Length = 549
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 36/270 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR+L+ +E+LI G LK++++ E K +N +
Sbjct: 266 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSNTEGKVTSQHHNPGAPRAPAAPKA 325
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL-----------DVQ 106
++N I P E ++R + I ++C+ +
Sbjct: 326 ----VINYINGGPSDEEYDSRRKRQKLLRAASI-------RECINSIRPGLTGGGPHPID 374
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+ F P + PH DAL++S++IG+ VRRIL+D SS +++ + V M
Sbjct: 375 GTIIFPPINPTRTLQPHLDALILSLEIGDFDVRRILVDPSSSADLVQASVVSHMGHSLAG 434
Query: 167 IKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRV 215
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M+
Sbjct: 435 LENPGRILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKA 494
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+PSTYHQ++ + T G ++ G Q R C
Sbjct: 495 IPSTYHQMVSFLTNEGQIDLYGSQLAARQC 524
>gi|147841874|emb|CAN78099.1| hypothetical protein VITISV_019421 [Vitis vinifera]
Length = 498
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR L +E LI G LK++++ + N + + P
Sbjct: 245 CAFHKEHGHTTETCRCLHYLVERLIRAGHLKQYLRSDTGXRDASRN--HNSGAPRALAAP 302
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ ++N I E + ++ P + + F P D I
Sbjct: 303 KAVINYINGGPSDEDIXARACQLHPAWDNWGGPRP---------IDGTIIFPPVDPTXIL 353
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH +AL++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+
Sbjct: 354 QPHRNALILSLEIGDFDVRRILVDPGSSTDLVQASVISHMGHSLIGLENPGRILSGFNRA 413
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ+L +
Sbjct: 414 STTSLGDIVLLVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYHQMLAARQC 473
Query: 230 YGIEEIGG 237
Y I G
Sbjct: 474 YQIAREAG 481
>gi|147802761|emb|CAN70850.1| hypothetical protein VITISV_039360 [Vitis vinifera]
Length = 501
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 30/259 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH + H T+ CR L +E+LI G LK++++ + PQN+N+ + +
Sbjct: 250 CAFHKEHGHTTKTCRCLHFLVEKLIKAGHLKQYLRSNAGGREVPQNRNSGAPR-----AP 304
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
P+ ++N I P + ++R + + I + + + + F
Sbjct: 305 DVPKAVINYINGGPSDDKYDSRRKRQKLLRAASIRERINSIQPGLTGGGPRPIDGTIIFP 364
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M + E
Sbjct: 365 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHM---GHSLACLEN 421
Query: 173 P---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPS 218
P L GF+G T S G ++ F VV+ SP+N IL R W+H M+V+PS
Sbjct: 422 PGRILSGFNGSSTTSLGDIVLPVQAGSITLNVQFSVVQELSPFNIILRRTWLHYMKVIPS 481
Query: 219 TYHQVLCYQTIYGIEEIGG 237
TYHQ++ + T G ++ G
Sbjct: 482 TYHQMVSFLTNEGQIDLYG 500
>gi|147805831|emb|CAN76027.1| hypothetical protein VITISV_031528 [Vitis vinifera]
Length = 527
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR L+ +E LI G LK++++ E + +N + + +
Sbjct: 244 CVFHKEHGHTTETCRCLQYLVERLIKAGHLKQYLRSDAEGRGASQHHN----SEAPKAPT 299
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLP 113
P+ ++N I P E ++R + + I + + + F P
Sbjct: 300 VPKTVINYINGGPSDEEYDSRQKRQKLLRAASIRERINSIRPGLTGGGPCPIDGTIIFPP 359
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VR IL+D GSS +++ + V +M ++ +
Sbjct: 360 VDPTRTLQPHRDALILSLEIGDFDVRHILVDPGSSADLVQASVVGRMGHSLTGLENPGRI 419
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G+++ F VV+ SP+N IL R W+H M+ +PSTYHQ
Sbjct: 420 LSGFNGSSTTSLGNIILTVQAGPVTLNVQFSVVQDLSPFNVILRRTWLHYMKAIPSTYHQ 479
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + G + G Q R C
Sbjct: 480 MVSFLIKDGQVNLYGSQLAARQC 502
>gi|147862848|emb|CAN78786.1| hypothetical protein VITISV_006287 [Vitis vinifera]
Length = 525
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 32/256 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR+L+ +E+LI G LK++++ E K +N +
Sbjct: 266 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKFTSQHHNPGAPRAPAAPKA 325
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
++N I P E ++R + I E + L + + F
Sbjct: 326 ----VINYINGGPSDEEYDSRRKRQKSLRAASIR--ERINSIWPGLTGEGPHPIDGTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+D GSSV+++ + V M
Sbjct: 380 PPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVVSHM----------- 428
Query: 172 QPLIGFSGIVTYSDG--SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
G + ++ G +L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 429 ----GHNIVLPVQAGPVNLNVQFSVVQELSPFNIILGRAWLHDMKAIPSTYHQMVSFLTN 484
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 485 EGQIDLYGSQLAARQC 500
>gi|147855835|emb|CAN79633.1| hypothetical protein VITISV_038059 [Vitis vinifera]
Length = 549
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+L+ +E LI G LK++++ + + + + + P
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDSSQH--HNSGAPTAPAAP 323
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + + + P D
Sbjct: 324 KAVINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIRPGLTGGGPRPIDGTIILPPVD 383
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S++IG VRRIL+D GSS +++ + V M ++ + L
Sbjct: 384 STRTLQPHRDALILSLEIGEFDVRRILVDPGSSTDLVQASVVGHMGHSLVGLENPGRILS 443
Query: 176 GFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G ++ F VV+ SP+N ILG W+H M+ +PSTYHQ++
Sbjct: 444 GFNGSSTTSLGDIILPVQDGPVTLNVQFSVVQELSPFNVILGHTWLHYMKAIPSTYHQMV 503
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 504 SFLTNEGQIDLYGSQLAARQC 524
>gi|3695395|gb|AAC62796.1| contains similarity to reverse transcriptase (Pfam: PF00078 rvt,
E=4.3e-08) [Arabidopsis thaliana]
gi|7267135|emb|CAB80803.1| AT4g03800 [Arabidopsis thaliana]
Length = 637
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 127/271 (46%), Gaps = 65/271 (23%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLK-----KDQIENSTSEPEQI 63
H T+DC LK+Y+ EL + G L +F N ++F+K +D E S+ ++
Sbjct: 81 HLTKDCIVLKRYLAELWASGDLSKF---------NIDDFVKQYHEARDNSETQNSKRPRL 131
Query: 64 ------------VNTIMAPLPL---EVHMTKER--NVYCKKREIEAPEEFSKKCVKLDVQ 106
+N I+ L V K+ NV K EE + +C
Sbjct: 132 TNEEEPRSSKGKINVILGGSKLCHNSVSAIKKHRPNVLLKS---SLSEEVNYQC------ 182
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
S VSF ++ + I+ PHDDAL+I++ + N + RIL+D GSSV+++
Sbjct: 183 SSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLI-------------F 229
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRV 215
+ P PL+ F+ S G++ + DF+V + YN ILG WI +M+
Sbjct: 230 LGP-PSPLVAFTSESAMSLGTIKLPVLAGKMSKIVDFVVFDKPATYNIILGTPWIFQMKA 288
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
VPSTYHQ L + T G+E I GD +RT A
Sbjct: 289 VPSTYHQWLKFPTSNGVETIWGDLEGSRTSA 319
>gi|147842207|emb|CAN73594.1| hypothetical protein VITISV_004696 [Vitis vinifera]
Length = 287
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 19/250 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E+LI G K++++ + ++ ++ + ++P
Sbjct: 27 CAFHKEHGHTTETCRSLQYLVEKLIKAGHQKQYLRSDTERKITSQHY--NPGAPRAPADP 84
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQD 115
+ ++N I P E ++R + I F + + + + F P D
Sbjct: 85 KAVINYINGGPSNEEYDSRQKRQKLLRAASIHERINFIRPGLTGGGPHPIDGTIIFPPVD 144
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
P+ DAL++S+++G+ VRRIL+D GSS +++ + V M +D + +
Sbjct: 145 STRTLQPYRDALILSLEVGDFDVRRILVDPGSSADLVQASVVSHMG-HRDIVLSIQ---- 199
Query: 176 GFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEI 235
+G VT L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++
Sbjct: 200 --AGPVT-----LNVQFSVVQELSPFNIILGRAWLHYMKAIPSTYHQMVSFLTNEGQIDL 252
Query: 236 GGDQATTRTC 245
G Q C
Sbjct: 253 YGSQLAACQC 262
>gi|147859537|emb|CAN83531.1| hypothetical protein VITISV_012857 [Vitis vinifera]
Length = 550
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 51/277 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T+ CR L Y++ L S + + + N N+ +I + + P
Sbjct: 306 CVFHKEHGHTTKACRCLH-YLQYLRSDARGGDASR-------NHNS-----RIPRAPAAP 352
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ I+N I N + P + + F P D I
Sbjct: 353 KAIINYI--------------NEGPSDEDWGGPHP---------IDGTIIFPPVDPTRIL 389
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 390 QPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENPGRILSGFNGS 449
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 450 STTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTK 509
Query: 230 YGIEEIGGDQATTRTC----ASNGMGKQNRELGSTRN 262
G ++ G Q R C G ++N L + N
Sbjct: 510 DGQIDLYGSQLAARQCYQIAREAGTSQENEPLPESSN 546
>gi|147861980|emb|CAN80914.1| hypothetical protein VITISV_039822 [Vitis vinifera]
Length = 671
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 18/256 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H H T CR+L +E+LI G LK++++ + + N + P
Sbjct: 398 CVYHKKHGHTTETCRSLHYLVEKLIRVGHLKQYLRSDARSSDASRN--HNSGTPKIPAAP 455
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ I+N I E + +E + K++ + ++ + + F P D I
Sbjct: 456 KAIINYIH-----EGPLDEEYDSKRKRQRLLRAASMRERGGPRPIDGIIIFPPIDPTQIL 510
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH D L++S+++G+ VRRIL+D+ SSV++L + + M ++ + L GF+
Sbjct: 511 QPHCDTLILSLEMGDFDVRRILVDHSSSVDLLQASVISHMGRNLTGLENPGRILSGFNEA 570
Query: 181 VTYSDG--------SLLT---DFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G SL+T F VV+ S +N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 571 TTTSLGDIVLPVQASLVTLNVQFSVVQNLSLFNVILGRTWLHYMKVIPSTYHQMVSFLTE 630
Query: 230 YGIEEIGGDQATTRTC 245
++ Q R C
Sbjct: 631 DRQIDLYSSQLAARQC 646
>gi|147855792|emb|CAN80728.1| hypothetical protein VITISV_034200 [Vitis vinifera]
Length = 422
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T R+L+ +E+ I G LK++++ E K +N +
Sbjct: 151 CAFHKEHGHTTETYRSLQYLVEKFIKAGHLKQYLRSDTEGKVTSQHHNPGAPRAPAAPKA 210
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVSFL 112
I+N I P + R R E + L + + F
Sbjct: 211 ----IINYING-CPSDEQYDSRRKRQKLLRAASIRERINSIRPGLTGGGPRPIDGTIIFA 265
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D SS +++ + V M ++ +
Sbjct: 266 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVAHMGHSLAGLENLGR 325
Query: 173 PLIGFSGIVTYSDGSLLTDFLVVKAT--SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
L GF+G T S G ++ L V+A SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 326 ILSGFNGSSTTSLGDII---LPVQAGPLSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNE 382
Query: 231 GIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 383 GQIDLYGSQLAARQC 397
>gi|147779459|emb|CAN69926.1| hypothetical protein VITISV_027209 [Vitis vinifera]
Length = 549
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH + H T CR+L+ E+LI G LK++++ + ++ Q+ N K
Sbjct: 266 CVFHKEHGHTTETCRSLQYLAEKLIKAGHLKQYLRSDTERKITSQHHNAGAPKAPAAPKV 325
Query: 58 SEPEQIVNTIMAPLPLEVHMT--KERNVYCK---KREIEAPEEFSKKCVKLDVQSEVSFL 112
++N I E H + K + + C + I + + + F
Sbjct: 326 -----VINYINGGPSDEEHDSRRKRQRLLCAASTRERINSIRPGLTGGGPHPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ +
Sbjct: 381 LVDPNRTLQPHRDALILSLEIGDFEVRRILVDPGSSADLIQASVVSHMGHTLIGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F +V+ SP+N ILGR W+H M+V+PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSMVQELSPFNIILGRIWLHYMKVIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q + + T G ++ G Q R C
Sbjct: 501 QTVSFLTNNGQIDLYGSQLAARQC 524
>gi|147779381|emb|CAN65566.1| hypothetical protein VITISV_030138 [Vitis vinifera]
Length = 408
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 31/272 (11%)
Query: 2 AFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPE 61
A+H + H T CR+L +E+LI G LK++++ E K + +TS
Sbjct: 144 AYHKEHGHTTEQCRSLHYLVEKLIKVGHLKQYIRSEGKSGETSRG---PSTTAPTTSVAL 200
Query: 62 QIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQS 121
++V + PL + +R ++R + A V+ V +S P
Sbjct: 201 RVVINYIHSGPLNEEYSSKRK---RQRLLRA------ASVREQV---ISVRPGLTNGSTR 248
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
P D + + N VRRIL+D+GSS N+L +++M ++ + L+GF+G
Sbjct: 249 PIDGVITFPPESMNFNVRRILVDSGSSANLLQVFVIKQMGFSPSNLENPGRILLGFNGAS 308
Query: 182 TYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S G ++ FLVV+ P+N ILG W+H M+V+PSTYHQ++ Y T
Sbjct: 309 TTSLGDIVLPAQAGLITLNMSFLVVEDLCPFNVILGHSWLHGMKVIPSTYHQMVSYLTED 368
Query: 231 GIEEIGGDQATTRTCASNGMGKQNRELGSTRN 262
G + G Q R C + E+GS+R+
Sbjct: 369 GHISLYGSQLAARQCY-----QVAPEVGSSRD 395
>gi|147856922|emb|CAN82831.1| hypothetical protein VITISV_005335 [Vitis vinifera]
Length = 531
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T +CR L +E I G LK+ ++ E +QN+ + P
Sbjct: 249 CAFHKEHGHTTEECRCLHYLVERFIRAGHLKQHLRSEAGGRASQNH---NSGAPRAPPAP 305
Query: 61 EQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R V + I + + + F P D
Sbjct: 306 KAVINYINGGPSDEEFDSKRKRQKLLRVASVRERINSIRSGLTGGGPRPIDGTIIFPPVD 365
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S++IG+ VRRIL++ GSS +++ + V MR ++ + L
Sbjct: 366 PTRTLQPHRDALILSLEIGDFDVRRILVNPGSSADLVQASVVSHMRHSLIGLENPRRILS 425
Query: 176 GFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G ++ F V++ SP+N ILGR W+H M+ + STYHQ++
Sbjct: 426 GFNGSSTTSLGDIVLLVQAGPVTLNVQFSVIQDLSPFNVILGRTWLHHMKAILSTYHQMV 485
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T ++ Q R C
Sbjct: 486 SFLTKDAQIDLYSIQLAARQC 506
>gi|147774488|emb|CAN70063.1| hypothetical protein VITISV_031483 [Vitis vinifera]
Length = 452
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 32/256 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR+L+ +E LI G L ++++ + D+ +N +
Sbjct: 211 CAFHKDHGHTTETCRSLQYLVERLIKAGHLNQYLRSDTRDRDASQHHNPGAPRAPAAPKA 270
Query: 59 EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVSF 111
++N P E ++R I PE +D + F
Sbjct: 271 ----VINYFNEEPSDEEYDSRRKRQKLLWAASIRERINSIRPELAGGGPRPID--GIIIF 324
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VR IL+D GSS +++ + V+ M
Sbjct: 325 PPVDPTRTLQPHRDALILSLEIGDFNVRCILVDPGSSADLVQASVVDHM----------- 373
Query: 172 QPLIGFSGIVTYSDGS--LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
G++ I+ GS L F VV+ SP+N ILGR W+H ++V+PSTYHQ++ + T
Sbjct: 374 ----GYNIILPVQAGSVTLNVQFSVVQELSPFNVILGRTWLHYIKVIPSTYHQMVSFLTN 429
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q TR C
Sbjct: 430 EGQIDLYGSQLATRQC 445
>gi|147834533|emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]
Length = 1387
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 50/259 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
A+H + H T C+ L+ +E LI G LK+++ + K QN N+ + +
Sbjct: 266 SAYHKEHGHTTEACKCLRYLVERLIKAGHLKQYLHSDAKGRDASQNHNSGTPR-----AP 320
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ P+ I+N I L E + +K + Q L
Sbjct: 321 TVPKAIINYINGGLFDEEYDSKRKR-------------------------------QRLL 349
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
+ SPH DAL++S++I + VRRIL+D GS +++ + + M ++ + L GF
Sbjct: 350 RVASPHRDALILSLEIRDFDVRRILVDPGSLADLVQASVISHMGRNLAGLENPGRILSGF 409
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G ++ F VV+ SP++ ILGR W+H M+ +PSTYHQ++ +
Sbjct: 410 NGASTTSLGDIVLPIQAGPVTLNIQFSVVQGLSPFDVILGRTWLHYMKAIPSTYHQMVSF 469
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 470 LTKDGQIDLYGSQLAARQC 488
>gi|109659804|dbj|BAE96748.1| GAG-POL precursor [Vitis vinifera]
Length = 279
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 20/257 (7%)
Query: 6 DCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSEPEQIV 64
D H T CR+ + +E LI G LK++++ + + +Q+N + +T + ++
Sbjct: 1 DHGHTTETCRSFQYLVERLIKAGHLKQYLRTDTGGRDVSQHNNPGAPRAPVAT---KAVI 57
Query: 65 NTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQDLKLI 119
N I P E ++R + I + + + + + F P D
Sbjct: 58 NYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPVDPTRT 117
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 118 LQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGRILSGFNG 177
Query: 180 IVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 178 SSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVIFLT 237
Query: 229 IYGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 238 HDGQIDLYGSQLAARQC 254
>gi|147775887|emb|CAN66797.1| hypothetical protein VITISV_039228 [Vitis vinifera]
Length = 478
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 32/263 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H CR L ++ LI G LK+ QN N+ + + + P
Sbjct: 205 CAFHKEHGHTIETCRCLHYLVKRLIKAGHLKD-------ASQNHNSGAPR-----APAVP 252
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVSFLP 113
++N I P E ++R + + E + + + + F P
Sbjct: 253 NAVINYINGGPXDEEYDSKRKRQKLLRAASVR--ERINSIWPGITGGGPRPIDGTIIFPP 310
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D I PH DAL++S++IG+ VRRIL+D GSS ++ + V M ++ +
Sbjct: 311 LDPTRILQPHRDALIMSLEIGDFDVRRILVDPGSSADLXQASVVNHMGHSLTGLENPGRI 370
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L F+G T S G ++ F V++ SP+N ILG W+H M+ +PSTYHQ
Sbjct: 371 LSRFNGSSTTSLGDIILXVQASPVTLNVQFSVLQXLSPFNVILGXTWLHYMKAIPSTYHQ 430
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 431 MVSFLTKDGQIDLYGSQLAARQC 453
>gi|147845203|emb|CAN79471.1| hypothetical protein VITISV_019587 [Vitis vinifera]
Length = 514
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 51/260 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED--KQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR + +E LI LK++++ ++ K +N + +
Sbjct: 266 CAFHKDHDHTTETCRAFQYLVERLIKAWHLKQYLRSDNGGKNASQHHN----PGXPRAPA 321
Query: 59 EPEQIVNTI--MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
P+ I+N I P P++ + F P D
Sbjct: 322 GPKAIINYINRGGPHPID--------------------------------GTIIFPPVDP 349
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 350 TRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHTLTGLENPGRILSE 409
Query: 177 FSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S G ++ F +V+ SP+N IL R W+H M+ +PSTYHQ++
Sbjct: 410 FNGSSTTSLGDIVLPVQAGPVTLNVQFSIVQELSPFNVILERTWLHYMKAIPSTYHQMVS 469
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 470 FLTNDGQIDLYGSQLAARQC 489
>gi|147856658|emb|CAN80311.1| hypothetical protein VITISV_040994 [Vitis vinifera]
Length = 434
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 44/258 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK--QPQNQNNFLKKDQIENSTS 58
C FH H T CR L +E LI G LK++++ + + +NF + +
Sbjct: 183 CVFHKGHGHTTEACRCLHYLVERLIKAGHLKQYLRSDARGGDASRNHNF----GTPRAPA 238
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
P+ ++ I + EE+ K K + S +
Sbjct: 239 APKAVIKYINGG--------------------PSDEEYDSKGKKQRLLRAAS-------V 271
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH D L++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+
Sbjct: 272 REHPHRDVLILSLEIGDFDVRRILVDPGSSADLVQISVISHMGHSLTGLENPGRILSGFN 331
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ +
Sbjct: 332 GASTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFL 391
Query: 228 TIYGIEEIGGDQATTRTC 245
T G ++ G Q C
Sbjct: 392 TKDGQIDLYGSQLAALQC 409
>gi|147771526|emb|CAN62496.1| hypothetical protein VITISV_027484 [Vitis vinifera]
Length = 526
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
C FH + H T CR L +E LI G LK+++++E QN N+ +
Sbjct: 243 CVFHKEHGHTTEICRCLHYLVERLIKAGHLKQYLRLEAGGRDASQNHNS-----GAPRAP 297
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK----LDVQSEVSFL 112
+ P+ I+N I P E ++R + + + + + + F
Sbjct: 298 AAPKAIINYINGGPFDEEYDSKRKRQKLLRAASVRERINSIRPGITGGGLRPIDETIIFP 357
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D I PH +A ++S++IG+ VRRIL+D GS +++ + V M ++ +
Sbjct: 358 PVDPTRILQPHRNAFILSLEIGDFDVRRILVDPGSLTDLVQASVVSHMGHSLTGLENPGR 417
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N +LGR +H M+V+PSTYH
Sbjct: 418 ILSGFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVVLGRTRLHYMKVIPSTYH 477
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 478 QMVSFLTNDGQIDLYGSQLAARQC 501
>gi|147777322|emb|CAN73692.1| hypothetical protein VITISV_042264 [Vitis vinifera]
Length = 539
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 41/281 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR+L+ +E LI G LK++++ + K +N + + +
Sbjct: 266 CVFHKEHGHTTEACRSLQYLVERLIKAGHLKQYIRSDAGGKVTSQHHN----PEAPRAPT 321
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVSF 111
+ ++N I P E ++R + I P +D + F
Sbjct: 322 ALKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLIGGGPRPID--GTIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH D L++S++I + VRRIL+D GSSV+++ + V +
Sbjct: 380 PPVDPTRTLQPHRDTLILSLEIRDFDVRRILVDPGSSVDLVQASVVGHI----------G 429
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 430 HILSGFNGSSTTSLGDIILPVQVGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTY 489
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
HQ++ + T G + G Q R C + RE G++R
Sbjct: 490 HQMVSFLTNEGQINLYGSQLAARQCY-----QIARETGTSR 525
>gi|147771452|emb|CAN73655.1| hypothetical protein VITISV_002495 [Vitis vinifera]
Length = 440
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C F + H T CR L +E+LI G LK++++ + +D +N S
Sbjct: 202 CVFLKEHGHTTETCRCLHYLVEKLIKAGHLKQYLRSDAG---------GRDASQNHNSRA 252
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ A L L +ER I + + + F P D
Sbjct: 253 PRASAATKAKL-LRAASIRER--------INSIRPGLTGGGPRPINGTIIFPPVDPTRTL 303
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 304 QPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENPGRILSGFNGS 363
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR +H M+V+PSTYH+++ + T
Sbjct: 364 STTSLGDIVLQIQAGPITLNVQFSVVQELSPFNIILGRTCLHYMKVIPSTYHKMVSFLTN 423
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 424 DGQIDLYGSQLAARQC 439
>gi|147835108|emb|CAN76905.1| hypothetical protein VITISV_005126 [Vitis vinifera]
Length = 477
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 37/256 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H CR L +E+LI G LK+++ + + KD +N S
Sbjct: 223 CAFHKEHGHTIETCRCLHYLVEKLIKAGHLKQYLCSDTR---------GKDASQNHNS-- 271
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
AP +V + Y + E++ K + + S P L+
Sbjct: 272 ----GAPRAPAATKVVIN-----YINGGPSD--EKYDSKRKRQRLLRAASTPPGTLQ--- 317
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH D L++S+++ + VRRIL+D GSS +++ + V M ++ ++ L GF+G
Sbjct: 318 -PHRDTLILSLEVVDFDVRRILVDPGSSADLVQASVVSHMGHSLAGLENPKRILSGFNGS 376
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 377 STTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTN 436
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 437 DGQIDLYGSQLAARQC 452
>gi|147779189|emb|CAN76798.1| hypothetical protein VITISV_031331 [Vitis vinifera]
Length = 549
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T +C L +E LI G LK+++ + N + + P
Sbjct: 266 CVFHKEHGHTTEECGCLHYLVERLIRAGHLKQYLCSDAGGKNTSQN--HNTGAPKAPAAP 323
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVS---------- 110
+ ++N I E + +K +KR+ +KC+ ++ +S
Sbjct: 324 KAVINYINGSPSDEEYDSK------RKRQKLLRVASVRKCIN-SIRPRISGGGPRLIDGT 376
Query: 111 --FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
F P D I H DAL++S++IG+ VRRIL+D GSS +++ + + M +
Sbjct: 377 IIFPPIDPTRILHLHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVISHM---GHSLT 433
Query: 169 PFEQP---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMR 214
E P L GF+G T S G ++ F VV+ SP+N ILGR W+H M+
Sbjct: 434 GLENPGLILSGFNGSSTTSLGDIVLSVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMK 493
Query: 215 VVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+PSTYHQ++ + T G ++ G Q R C
Sbjct: 494 AIPSTYHQMISFLTKDGQIDLYGSQLAARQC 524
>gi|147852424|emb|CAN83773.1| hypothetical protein VITISV_043299 [Vitis vinifera]
Length = 497
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 60/256 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR+L +E+LI LK++++++ + Q + ++ +P
Sbjct: 266 CAYHKEHGHTTETCRSLHYLVEKLIRARHLKQYLRLDARARQLHTAW-------DNWGDP 318
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
I TI+ P P D I
Sbjct: 319 RLIDGTIIFP------------------------------------------PVDPTRIL 336
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S+++ + VRRIL+D G+S +++ + + M ++ + L GF+
Sbjct: 337 QPHRDALIMSLEMEDFDVRRILVDPGNSADLVQPSAISHMGRNLTGLENPRRILSGFNET 396
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 397 ATTSLGDIVLSVQANPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTE 456
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 457 DGQIDLYGSQLAARQC 472
>gi|147806335|emb|CAN72090.1| hypothetical protein VITISV_019913 [Vitis vinifera]
Length = 519
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR L+ +E LI G LK+++ D + + +
Sbjct: 253 CAFHKEHGHTTETCRCLQYLVERLIKAGHLKQYL-CSDAGGRGASQHHNSGAPRAPAAP- 310
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVSFLP 113
+ ++N I P E ++R + I E + L + + F P
Sbjct: 311 KAVINYINGDPYDEEYDSRRKRQKLLRAASIR--ERINSIWPGLTGGGPRPINGTIIFPP 368
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH +AL++S++IG+ VR IL+D GSSV+++ + V M ++ +
Sbjct: 369 VDPTRTLQPHRNALILSLEIGDFDVRHILVDPGSSVDLVQASVVGHMGHSLTGLENLGRI 428
Query: 174 LIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
L GF+G T S G ++ + SP+N ILGR W+H M+ + STYHQ++ + T G
Sbjct: 429 LSGFNGSSTTSLGD------IILSLSPFNVILGRTWLHYMKAILSTYHQMVSFLTNDGQI 482
Query: 234 EIGGDQATTRTC 245
++ G Q R C
Sbjct: 483 DLYGSQLAARQC 494
>gi|147788833|emb|CAN68916.1| hypothetical protein VITISV_006670 [Vitis vinifera]
Length = 446
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T CR L +E+LI G LK++++ + ++D +N S
Sbjct: 195 CVFHKEHSHTTETCRCLHYLVEKLIKAGHLKQYLRSDAG---------RRDASQNHNSR- 244
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKRE-IEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
T AP TK+ RE I + + + + F P D
Sbjct: 245 -----TPRAPA-----ATKKMLWAASVRERINSIRPGLTRGGPRPIDGTIIFPPVDPTRT 294
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF-- 177
PH DAL++ ++IG+ VRRIL+D G+S +++ K + +I+ ++G
Sbjct: 295 LQPHRDALILFLEIGDFDVRRILVDPGNSADLVQPHKPRKPWMNPVRIQRVVNYVLGRHC 354
Query: 178 SGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
+ ++ S T LVV+ SP+N ILGR W+H M+V+PSTYHQ++ + T G ++ G
Sbjct: 355 TAGPSWPSHSQRT-ILVVQELSPFNIILGRTWLHYMKVIPSTYHQMVSFLTNDGQIDLYG 413
Query: 238 DQATTRTC 245
Q R C
Sbjct: 414 SQLAARQC 421
>gi|147858743|emb|CAN82904.1| hypothetical protein VITISV_007040 [Vitis vinifera]
Length = 479
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H CR L +E LI G LK++++ + +D +N S
Sbjct: 233 CVFHKEHGHTMETCRCLHYLVERLIKAGHLKQYLRSDAG---------GRDTSQNHNSRA 283
Query: 61 EQIVNTIMAPLPLEVHMTKERN-------VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
+ AP + + +K + C++ P +D + F P
Sbjct: 284 PR------APTATKAYDSKRKRQKLLRAATVCERINSIQPRITGGGPHPID--GTIIFPP 335
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D PH DAL++S++IG+ VRRIL+D GSS N++ A+V L D I P +
Sbjct: 336 VDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSANLVQ-ASVSTTSLG-DIILPVQ-- 391
Query: 174 LIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
+G +T L F VV+ SP+N ILGR W+H M+ +PSTY+Q++ + T G
Sbjct: 392 ----AGSIT-----LNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYYQMVSFLTNDGQV 442
Query: 234 EIGGDQATTRTC 245
++ G Q R C
Sbjct: 443 DLYGSQLAARQC 454
>gi|147823329|emb|CAN70869.1| hypothetical protein VITISV_029059 [Vitis vinifera]
Length = 501
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 27/258 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CA+H + H T CR+L +E+LI G L ++ + P+ N++ + Q+++
Sbjct: 233 CAYHKEHGHTTETCRSLHYLVEKLIRAGHLIPLLRCQRVPAAPKAIINYINEGQLDDEYD 292
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
+ + + + +V + I PE + +D + F P D
Sbjct: 293 SKRK-----------KQRLLRATSVSERVNSIR-PEITGRGPRPID--GTIIFPPVDPTR 338
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH + L++S+ +G+ VR IL+D G+S +++ + + M ++ + L F+
Sbjct: 339 ILQPHRETLILSLGMGDFDVRGILVDPGNSADLVQASVISHMGRNLIGLENPGRILSRFN 398
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T S G ++ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ +
Sbjct: 399 GTTTTSLGDIVLPVQGGPVTLNVQFSVVQDLSPFNVILGRIWLHHMKVIPSTYHQMVSFL 458
Query: 228 TIYGIEEIGGDQATTRTC 245
T G ++ G+Q R C
Sbjct: 459 TEDGQIDLYGNQLAARQC 476
>gi|147779354|emb|CAN70083.1| hypothetical protein VITISV_008998 [Vitis vinifera]
Length = 514
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 46/275 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T CR +E L+ G LK++++ +N KD ++ S
Sbjct: 255 CVFHKEHGHTTETCRCFHYLVERLVKAGHLKQYLR---------SNAGGKDTSQDHNS-- 303
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFL-------- 112
+ AP +V + N E ++ + K + V+ ++ +
Sbjct: 304 ----GALRAPAATKV-VISYINGGPSDEEYDSKRKRQKLLLVASVRERINSIRPGLIGGG 358
Query: 113 --PQDLKLI---------QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMR 161
P D +I PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 359 PRPIDGTIIFPLVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMG 418
Query: 162 LEQDKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWI 210
++ + L GF+ T S G ++ FLVV+ P+N ILGR W+
Sbjct: 419 HSLTGLENPGRILSGFNRSSTTSLGDIVLPVQAGPVTLNVQFLVVQELPPFNIILGRTWL 478
Query: 211 HKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
H M+ +PSTYHQ++ + T G ++ G Q TR C
Sbjct: 479 HYMKAIPSTYHQMVSFLTNDGQVDLYGSQLATRQC 513
>gi|147798136|emb|CAN73896.1| hypothetical protein VITISV_032337 [Vitis vinifera]
Length = 410
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH H T CR L +E LI G LK++++ + + + P
Sbjct: 161 CVFHKKHGHTTETCRCLHYLVERLIRVGHLKQYLRSDTGGRDASRD--HNSGAPRAPXAP 218
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK-----KREIEAPEEFSKKCVKLDVQSEVSFLPQ 114
+ ++N I P E ++R + +R + + + F P
Sbjct: 219 KAVINYINXGPSDEEYDSKRKRQKLLRAASXHERVXSIRPGITGGGGPRPIDGTIIFPPV 278
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D I PH DAL++S++IG+ VR IL+D SS +++ + + M ++ + L
Sbjct: 279 DPTRILQPHXDALILSLEIGDFDVRCILVDPDSSADLVQASVISHMGHSLTGLENPGRIL 338
Query: 175 IGFSGIVTYSDGSLLTDFLVVKAT---SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
GF+G T S G ++ L+V+A SP+N ILGR W+H M+V+PSTYHQ++ + T G
Sbjct: 339 SGFNGASTTSLGDIV---LLVQAGPDLSPFNVILGRTWLHYMKVIPSTYHQMIRFLTKDG 395
Query: 232 IEEIGGDQATTRTC 245
++ G Q R C
Sbjct: 396 QIDLYGSQLAARQC 409
>gi|147775563|emb|CAN78198.1| hypothetical protein VITISV_037292 [Vitis vinifera]
Length = 522
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 28/264 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
C FH + H T+ CR L +E+LI G LK++++ + + PQN+N+ +
Sbjct: 266 CVFHKEHGHTTKTCRCLHFLVEKLIKVGHLKQYLRSDAGGREVPQNRNS-----GAPTAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
+ P+ ++N I P E ++R + I E + + L + +
Sbjct: 321 AAPKAVINYINGGPSNEEYDSRRKRQKSLRAASIR--EHINSIRLGLTGGGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D H DAL++S++IG+ VRRIL+D GSS +++ + V M ++
Sbjct: 379 FPPVDPIRTLQLHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L F+G T S G ++ F VV+ SP+N ILGR W++ M+V+PST
Sbjct: 439 GRILSEFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLYYMKVIPST 498
Query: 220 YHQVLCYQTIYGIEEIGGDQATTR 243
YHQ++ + T G ++ G Q R
Sbjct: 499 YHQMMSFLTNEGQIDLYGSQLAAR 522
>gi|147839825|emb|CAN70557.1| hypothetical protein VITISV_036328 [Vitis vinifera]
Length = 549
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 24/264 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
CAFH + H +CR L +E LI G LK +++ + QN N + +
Sbjct: 266 CAFHKEHGHTMEECRCLHYLVERLIRAGHLKHYLRSDVGGKNVSQNHNTGAPR-----AP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ + I+N I P E ++R + + I + + + F
Sbjct: 321 AALKAIINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIRPGISGGGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
D I PH D ++S++I + VRRIL+D GSS +++ + + M ++ +
Sbjct: 381 LVDPTRILHPHRDVFILSLEIRDFDVRRILVDPGSSADLVQASVISHMGRSLTGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 441 ILSGFNGSSTTSLGDIVLSVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTYH 500
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 501 QMVSFLTKDGQIDLYGIQLAVRQC 524
>gi|147773586|emb|CAN65418.1| hypothetical protein VITISV_016768 [Vitis vinifera]
Length = 510
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 30/262 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
CAFH D H T E LI G LK++++ + + +Q+N + +T
Sbjct: 237 CAFHKDHGHTT----------ETLIKAGHLKQYLRTDTGGRDVSQHNNPGAPRAPVAT-- 284
Query: 60 PEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQ 114
+ ++N I P E ++R + I + + + + + F P
Sbjct: 285 -KAVINYISGGPSDEEYDSRRKRQKLLRAASIRERINSIRSGLTGEGPRPIDGTIIFPPV 343
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 344 DPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVGHMGHSLVGLENPGRIL 403
Query: 175 IGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ+
Sbjct: 404 SGFNGSSTTSLGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQM 463
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ G Q R C
Sbjct: 464 VSFLTYDGQIDLYGSQLAARQC 485
>gi|147769079|emb|CAN63675.1| hypothetical protein VITISV_021680 [Vitis vinifera]
Length = 517
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+ + + + Q N N + P
Sbjct: 254 CAFHKDHGHTTETCRSF---------------YGRRDTPQHHNPGNL-------RAPVAP 291
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSE--------VSF 111
+ ++N I P E ++R + I ++L + E + F
Sbjct: 292 KAVINYITGGPSDEEYDSRRKRQKLLRAASIRE----LINSIRLGLTGEGPRPIDGTIIF 347
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRILID GSS +++ + V M ++
Sbjct: 348 PPVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSTDLVQASVVGHMGHTLTGLENPG 407
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 408 RILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTY 467
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 468 HQMVSFLTNDGQIDLYGSQLAARQC 492
>gi|147769742|emb|CAN60950.1| hypothetical protein VITISV_000873 [Vitis vinifera]
Length = 509
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH D H T C+ + +E LI G LK++++ + N +
Sbjct: 251 CVFHKDHGHTTETCQAFQYLVERLIKAGHLKQYLRSD-----------------NGGRDA 293
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
Q N + P T + + I + + + F P D
Sbjct: 294 SQHHNPGVPRAP-----TAPKAXXSIRERINSIRPGLTGGGPRPIDGTIIFPPVDPNRTL 348
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+
Sbjct: 349 QPHCDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHTLTGLENPGRILSGFNRS 408
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILG W+H M+ +PSTYHQ++ + T
Sbjct: 409 STTSLGDIVLSVQADPVTLNVQFSVVQELSPFNVILGCTWLHYMKAIPSTYHQMVSFLTN 468
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 469 DGQIDLYGSQLAARQC 484
>gi|147770553|emb|CAN73415.1| hypothetical protein VITISV_013267 [Vitis vinifera]
Length = 562
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C FH + H T +CR L + LI G LK++++ + K +D +N S
Sbjct: 279 CVFHKEHGHTTEECRCLHYLVVRLIRAGNLKQYLRSDTK---------GRDAFQNHNSGA 329
Query: 59 -----EPEQIVNTIMAPLPLEVHMTKE------RNVYCKKREIEAPEEFSKKCVKLDVQS 107
P+ ++N I E + +K R+ ++R + ++ +
Sbjct: 330 PKASAAPKAVINYINGGSSDEEYDSKRKRQKLLRDASVRERINSIRPGLTGGGLR-SIDG 388
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+ F P D PH DAL++S++I + +RRIL+ G+S N++ + V M +
Sbjct: 389 TIIFPPVDPTPTLQPHRDALILSLEIRDFNMRRILVYPGNSANLVQASVVSHMGHSLTNL 448
Query: 168 KPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVV 216
+ + L GF+G T S G ++ F V+ S +N ILGR W+H M+V+
Sbjct: 449 ENPRRILSGFNGSSTMSLGDIVLPVQVDPITLNVQFSAVQDLSHFNVILGRTWLHYMKVI 508
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
PSTYHQ++ + T G ++ G Q R C
Sbjct: 509 PSTYHQMVSFLTKDGQIDLYGSQLVARQC 537
>gi|147803264|emb|CAN64381.1| hypothetical protein VITISV_024226 [Vitis vinifera]
Length = 471
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 22/262 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C + D H T CR+L +E+L+ G LK++++ P+ + + + + + P
Sbjct: 201 CDYRKDHGHTTEMCRSLHYMVEDLLKVGHLKQYIRTT---PRGEGS--SHGRGPRAPTXP 255
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLPQ 114
+ V + PL+ + +R R E S L + + F
Sbjct: 256 VRAVINYIHREPLDDEYSSKRKRQRLLRAATVREHVSSIRPGLVDGSIHPIDGTIVFPVV 315
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D + PH DAL++++ +G+ V+RIL+D GS ++L A +++M ++ + L
Sbjct: 316 DPTQVLQPHRDALILTLGVGDFDVKRILVDPGSFADLLQVAVIKQMGFIPSSLENPGRTL 375
Query: 175 IGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+ T S G + F VV+ SP+N ILGR W+H M+V+PSTYHQ+
Sbjct: 376 SGFNSSSTTSLGDVTLPVQAGPVILNVLFSVVEDLSPFNVILGRTWLHGMKVIPSTYHQM 435
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ Q R C
Sbjct: 436 VSFITQDGQIDLYRSQLAARQC 457
>gi|147823326|emb|CAN64193.1| hypothetical protein VITISV_027122 [Vitis vinifera]
Length = 394
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H T CR+L +E+LI G LK++++ + + N +S + ++++
Sbjct: 159 HTTETCRSLHYLVEKLIRAGHLKQYLRSDARGRDASRNHNSGTPRYDSKRKRQRLLRA-- 216
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
M + N P + + F P D I PH D+L+
Sbjct: 217 ------TSMRERVNSIRPXITGRGPRP---------IDGTIIFPPVDPTRILQPHRDSLI 261
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL 188
+S+++G+ VRRIL+D GSS +++ + + M ++ + L F+G T S G +
Sbjct: 262 LSLEMGDFDVRRILVDPGSSADLVQASVISHMGRNLIGLENPGRILSRFNGATTTSLGDI 321
Query: 189 L-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
+ F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T G + G
Sbjct: 322 VLPVQAGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTEDGQINLYG 381
Query: 238 DQATTRTC 245
Q R C
Sbjct: 382 SQLAARQC 389
>gi|147860446|emb|CAN80435.1| hypothetical protein VITISV_001562 [Vitis vinifera]
Length = 529
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR L+ +E LI LK++++ + + + S P
Sbjct: 266 CAFHKDHGHTTETCRALQYLVERLIKAXHLKQYLRSD-----TEGRITSQHHNPGSPQGP 320
Query: 61 EQIVNTIMAPLPLEVHMTKER-NVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ L +ER N P + + F P D
Sbjct: 321 SXPQGQKL----LRAASIRERINSIRPGLTXGGPRP---------IDGTIIFPPVDPTRT 367
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP---LIG 176
H DAL++S++IG+ V RIL+D SS +++ + V M + E P L G
Sbjct: 368 LQXHRDALILSLEIGDFDVWRILVDPDSSADLVQASVVGHM---GHSLXGLENPGXILSG 424
Query: 177 FSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++
Sbjct: 425 FNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVS 484
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 485 FLTNDGQIDLYGSQLXARQC 504
>gi|147863549|emb|CAN81923.1| hypothetical protein VITISV_016003 [Vitis vinifera]
Length = 512
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 47/257 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR+L+ +E LI G L + D + K+ ++ + S
Sbjct: 266 CAFHKKHGHTTETCRSLQYLVERLIKAGHLNSSDEEYDSR-------RKRQKLLRAASIR 318
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD-LKLI 119
E+I N+I L C + + F P D ++ +
Sbjct: 319 ERI-NSIRPGL--------TGGGLCP------------------IDGTIIFPPVDPIRTL 351
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
QS H DAL++S++IG+ VRRIL+D GS +++ + V M ++ + L GF+G
Sbjct: 352 QS-HRDALILSLEIGDFDVRRILVDPGSLADLVQASVVGHMGHSLAGLENPGRILSGFNG 410
Query: 180 IVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 411 SSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLT 470
Query: 229 IYGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 471 NEGQIDLYGSQLAARQC 487
>gi|359485690|ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
Length = 955
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 53/257 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H D H CR+L +E L+ +G LK++V+ K + + + +
Sbjct: 328 CAYHKDHGHTAEACRSLHLLVENLLKEGHLKQYVRAATKSGEPS----RDHGLRGPIAPV 383
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
I+N I PL E + ++R + + I+ +
Sbjct: 384 RAIINYIHGGPLDEEYNSKRKRQILLRAATIQEHK------------------------- 418
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+IG+ V+RIL+D GSS ++L + V++M + + L GF+G
Sbjct: 419 ------------RIGDFDVKRILVDPGSSTDLLQVSVVKQMGFIPSSQENPGRMLSGFNG 466
Query: 180 IVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
T S G ++ F VV+ SP+NAILGR W+H M+V+PSTYHQ++ + T
Sbjct: 467 ASTTSLGDVILPIQAGPVILNVLFSVVEDLSPFNAILGRTWLHSMKVIPSTYHQMVSFIT 526
Query: 229 IYGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 527 HDGQVDLYGSQLVARQC 543
>gi|147841593|emb|CAN64232.1| hypothetical protein VITISV_008999 [Vitis vinifera]
Length = 388
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 17/166 (10%)
Query: 97 SKKCVKLD------VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVN 150
++KC +L + ++F D I PH DA ++ + I + VR+IL+D GSS+N
Sbjct: 198 NRKCPRLTNGSARPIDGVITFPSVDPNRILQPHKDAFILMLGINDFDVRQILVDPGSSIN 257
Query: 151 ILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATS 199
+L + +++M ++ Q L GF+G T S G ++ F +V S
Sbjct: 258 LLQVSVIKQMGFSPSSLENLGQILSGFNGASTTSLGDIVLPVQVGPVILSVQFSIVNDLS 317
Query: 200 PYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
P+NAILGR W+H M+V+PSTYHQ++ Y T ++ G Q R C
Sbjct: 318 PFNAILGRAWLHGMKVIPSTYHQMVSYLTEDRQIDLYGSQLANRKC 363
>gi|147811674|emb|CAN72670.1| hypothetical protein VITISV_028693 [Vitis vinifera]
Length = 493
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 26/244 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
C FH + H T CR L+ +E LI G LK++++ E + +N + +
Sbjct: 226 CVFHKEHGHTTEICRCLQYLVERLIKAGHLKQYLRSDTEGRGASQHHN----SGAPKARA 281
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVSF 111
P+ ++N I P E ++R + I E + +L + + F
Sbjct: 282 APKAVINYINGGPSDEEYDSKRKRQKLLRAASIR--ERINSIRPRLTRGGPRPIDGTIIF 339
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+D GS +++ + V +M ++
Sbjct: 340 PPVDPTRTLQPHCDALILSLEIGDFDVRRILVDPGSLADLVQASVVGRMGHSLTGLENPG 399
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
+ L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTY
Sbjct: 400 EILSGFNGSSTTSLGDIILTVQAGPINLNVQFSVVQDLSPFNVILGRTWLHYMKAIPSTY 459
Query: 221 HQVL 224
HQ++
Sbjct: 460 HQMV 463
>gi|147807456|emb|CAN77423.1| hypothetical protein VITISV_032394 [Vitis vinifera]
Length = 498
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 49/251 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK-QPQNQNNFLKKDQIENSTSE 59
CAFH D H T CR+ + +E LI G LK++++ + + + +Q+N + +T
Sbjct: 266 CAFHKDHXHTTETCRSFQYLVERLIKAGHLKQYLRTDTRGRDVSQHNNPGAPRAPVAT-- 323
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQ 114
+ ++N I P E ++R + I + + + + + F P
Sbjct: 324 -KXVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTREGPRPIDGTIIFPPV 382
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D PH DAL++S++IG+ VRRIL+D GSS ++
Sbjct: 383 DPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADL----------------------- 419
Query: 175 IGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEE 234
F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G +
Sbjct: 420 -----------------FSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNDGQID 462
Query: 235 IGGDQATTRTC 245
+ G Q R C
Sbjct: 463 LYGSQLAARHC 473
>gi|147775628|emb|CAN67188.1| hypothetical protein VITISV_015934 [Vitis vinifera]
Length = 527
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 38/266 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ Q+ N + +
Sbjct: 254 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYIRSNTGGRDVSQHHNXGAPRAPVA--- 310
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 311 --PKAVINYINGXPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 366
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D + M ++
Sbjct: 367 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVD----------PVIGHMGHSLAGLENP 416
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N ILGR +H M+ +PST
Sbjct: 417 GRILSGFNGSSTTSLGDIILPVQAGPXTLNVQFSVVQELSPFNVILGRTXLHYMKAIPST 476
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
YHQ++ + T G ++ G Q R C
Sbjct: 477 YHQMVSFLTDEGQTDLYGSQLAARQC 502
>gi|147765788|emb|CAN60191.1| hypothetical protein VITISV_038417 [Vitis vinifera]
Length = 449
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 273 IDGTIIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDXGSSADLVQASVVGHMGHSL 332
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 333 XGLENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYM 392
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRNQP 264
+ +PSTYHQ++ + T G ++ G Q R C + G++ +P
Sbjct: 393 KAIPSTYHQMVSFLTNEGQTDLYGSQLAARQCYQIAREAGTSQEGASPPEP 443
>gi|147819382|emb|CAN71221.1| hypothetical protein VITISV_043564 [Vitis vinifera]
Length = 1145
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 20/220 (9%)
Query: 21 IEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIMA-PLPLEVHMTK 79
+E+L+ G LK++V+ K ++ + + I + + I+N I PL E + +
Sbjct: 215 VEDLLKAGHLKQYVRTTSKSGESSHGHGPRAPI----APVKAIINYIHGGPLNDEYNSRR 270
Query: 80 ERNVYCKKREI-EAPEEFSKKCVKLDVQS---EVSFLPQDLKLIQSPHDDALVISIKIGN 135
++ + + E + ++ V S + F P D + PH DAL++++ IG+
Sbjct: 271 KKQRLLQATTVREHVSSIRPRLARVSVHSIDRAIVFSPIDPTRVLQPHRDALILTMGIGD 330
Query: 136 CLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD---- 191
V+RIL+D+GSS ++L + V++M ++ + L GF+G T S G ++
Sbjct: 331 FDVKRILVDSGSSADLLQVSMVKQMGFIPSSLENLGRILSGFNGASTTSLGDIILPIQAG 390
Query: 192 -------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F VV+ SP+NAIL R W+H M+ +PSTYHQ++
Sbjct: 391 PVTLNVLFSVVEDLSPFNAILRRTWLHSMKAIPSTYHQMI 430
>gi|147844598|emb|CAN80065.1| hypothetical protein VITISV_035227 [Vitis vinifera]
Length = 471
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 22/248 (8%)
Query: 30 LKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIMA-PLPLEVHMTKERNVYCKKR 88
L+E + + Q Q +FLK + P+ I+N I PL E ++R +
Sbjct: 217 LREAPPYDPRPIQLQRHFLKSQL--RILATPKAIINYIHGGPLDEEYDSKRKRQRLLRAA 274
Query: 89 EIEAPEEFSKKCVK----LDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILID 144
I + + + + F D I PH +AL++S+ +G+ VRRILID
Sbjct: 275 SIRERVNSIRPGIAGGGPQPIDGTIIFPLIDPTRILQPHREALILSLGMGDFDVRRILID 334
Query: 145 NGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS---------DGSLLTD--FL 193
GSS ++L + + M + ++ + L GF+G+VT S GS+ + FL
Sbjct: 335 PGSSTDLLQTSVIGHMGRDLSGLENLGRILSGFNGVVTTSLRDIVLPVQAGSVTLNVQFL 394
Query: 194 VVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCAS----NG 249
VV+ SP+NAILG W+H M+V+PSTY+Q++ + T G ++ G Q R C G
Sbjct: 395 VVQDLSPFNAILGLTWLHYMKVIPSTYYQMVSFLTEDGQIDLHGSQLVVRQCYQIAREAG 454
Query: 250 MGKQNREL 257
+++R L
Sbjct: 455 TSQEDRSL 462
>gi|8778610|gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 84 YCKKREIEAPEEFSKKCVKLDVQSE-VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRIL 142
Y KK E+ S + QS +SF DL+ + +PH+D LV+ + I + V R+L
Sbjct: 574 YRKKAEMVVAWPSSTSTTRNPNQSAPISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVL 633
Query: 143 IDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTD 191
ID GSSV+++ + M + +IKP +PL GF G + G++
Sbjct: 634 IDTGSSVDLIFKDVLTAMNITDRQIKPVSKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVK 693
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGI 232
F+V+ + YN ILG WIH+M+ +PSTYHQ + + T GI
Sbjct: 694 FVVIGKPAVYNVILGTPWIHQMQAIPSTYHQCVKFPTHNGI 734
>gi|147810824|emb|CAN65034.1| hypothetical protein VITISV_041070 [Vitis vinifera]
Length = 475
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH+D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHSDHGHTTETCRSLQYLVERLIRAGHLKQYLRSDAGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S+ IG+ VRR+L+D GSS +++ + + M +D I P
Sbjct: 379 FPPVDPTRTLQPHRDALILSLGIGDFDVRRVLVDPGSSADLVQASVIGHMG-HRDIILPV 437
Query: 171 EQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ +G VT L F VV+ SP+N ILGR W+H M+ +PST
Sbjct: 438 Q------AGPVT-----LNVQFSVVQELSPFNVILGRTWLHYMKAIPST 475
>gi|147770371|emb|CAN73648.1| hypothetical protein VITISV_036842 [Vitis vinifera]
Length = 526
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 41/261 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR+ + Q N N + + P
Sbjct: 266 CAFHKDHGHTTETCRSFQGA------------------PQHHNPGNL-------RAPAAP 300
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + + + F P D
Sbjct: 301 KXVINYITGGPSDEEYDSRRKRQKLLRAASMRERINSIRPGLTGGGPRPIDGTIIFPPVD 360
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S++IG+ VRRILID GSS +++ + V M ++ + L
Sbjct: 361 PTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLVQASVVGHMGHTLTGLENPGRILS 420
Query: 176 GFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++
Sbjct: 421 GFNGFSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMV 480
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q C
Sbjct: 481 SFLTNDGQIDLYGSQLAACQC 501
>gi|147776509|emb|CAN65131.1| hypothetical protein VITISV_005198 [Vitis vinifera]
Length = 494
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 11/135 (8%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 335 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHSLTGLENPGRILSGFNGSS 394
Query: 182 TYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S G +L F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 395 TTSLGDILLPVQASPVTLNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQMVSFLTKD 454
Query: 231 GIEEIGGDQATTRTC 245
G I Q T R C
Sbjct: 455 GQINIYDSQLTARQC 469
>gi|147814809|emb|CAN72341.1| hypothetical protein VITISV_025653 [Vitis vinifera]
Length = 474
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ V M
Sbjct: 298 IDGTIIFPPVDPTRTLQPHHDALILSLEIGDFDVRRILVDPGSSADLVQALVVSHMGHSL 357
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ Q L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 358 TGLENPGQILSGFNGSSTTSLGDIILSVQAGPVTLNVQFSVVQELSPFNVILGRTWLHYM 417
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+V+PSTYHQ++ + T G ++ Q R C
Sbjct: 418 KVIPSTYHQMVSFLTNDGQIDLYDSQLAARQC 449
>gi|147766522|emb|CAN69878.1| hypothetical protein VITISV_015633 [Vitis vinifera]
Length = 502
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH D H T CR + + + + G + V V K N N D+ +S +
Sbjct: 266 CVFHKDHGHTTETCRAFQD-VSQHNNLGAPR--VSVAPKAVINYINGGPSDEEYDSRRKR 322
Query: 61 EQIVNTIMAPLPLEVHMTKER-NVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+++ L +ER N E P + + F P D
Sbjct: 323 QKL---------LRAASIRERINSIRPGLTGEGPRP---------IDGTIIFPPVDPART 364
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH DAL++S++IG+ VRRIL+D GSS +++ + V++M + I P + +G
Sbjct: 365 LQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVDRM--GHNIILPVQ------AG 416
Query: 180 IVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
VT L F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T G ++ G Q
Sbjct: 417 PVT-----LNVQFSVVQELSPFNVILGRTWLHYMKVIPSTYHQMVSFLTNDGQIDLYGSQ 471
Query: 240 ATTRTC 245
R C
Sbjct: 472 LAARQC 477
>gi|147856422|emb|CAN82845.1| hypothetical protein VITISV_005762 [Vitis vinifera]
Length = 514
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH D L++S+++G+ VRRIL+D GSS +++ + V M
Sbjct: 338 IDGTIIFPPVDPTRTLQPHRDTLILSLEVGDFDVRRILVDPGSSADLVQASVVSHMGHSL 397
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ FL+V+ SP+N ILGR W+H M
Sbjct: 398 AGLENPGRILSGFNGSSTTSLGDIVLLVQAGPVTLNVQFLMVQELSPFNIILGRAWLHYM 457
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 458 KAIPSTYHQMVSFLTNEGQIDLYGSQLAARQC 489
>gi|147769223|emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
Length = 781
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T CR L +E LI G LK+++ + N+ + + P
Sbjct: 202 CVFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLLSDTGGRDASQNY--NSGAPRAPAAP 259
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ ++N I + EE+ K + Q L
Sbjct: 260 KAVINYINGG--------------------PSDEEYDSKRKR-----------QKLLRAA 288
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
H DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 289 XSHHDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHNLTGLENLGRILSGFNGS 348
Query: 181 VTYS-----------DGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S +L F VV+ SP+N ILGR W+H M+V+PSTY+Q++ + T
Sbjct: 349 TTTSLRDIVLPVKAGPVTLNLQFSVVQDLSPFNVILGRTWLHYMKVIPSTYYQMVSFLTK 408
Query: 230 YGIEEIGGDQATTRTC 245
G ++ Q R C
Sbjct: 409 DGQIDLYDSQLAARQC 424
>gi|147822340|emb|CAN68500.1| hypothetical protein VITISV_026903 [Vitis vinifera]
Length = 501
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D I PH DAL++S++IG+ VRRIL+D GSSV+++ + + M
Sbjct: 346 IDGTIIFPPADPTQILQPHRDALILSLEIGDFDVRRILVDPGSSVDLVQASVISHMGRSL 405
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+ T S G ++ F VV+ SP+N ILGR W++ M
Sbjct: 406 TGLENPXRILSGFNXASTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLYYM 465
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 466 KAIPSTYHQMVSFLTKDGQIDLYGSQLAARQC 497
>gi|147781053|emb|CAN65844.1| hypothetical protein VITISV_031777 [Vitis vinifera]
Length = 345
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 152 IDGTIIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSL 211
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L F+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 212 TGLENPGRILSRFNGSSTTSLGDIVLPVQTGPVTLNVQFSVVQELSPFNVILGRTWLHYM 271
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q TR C
Sbjct: 272 KAIPSTYHQMVSFLTNDGQIDLHGSQLATRQC 303
>gi|224129068|ref|XP_002328882.1| predicted protein [Populus trichocarpa]
gi|222839312|gb|EEE77649.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H T DC L K +E L+++G L F+K + Q + ++D++
Sbjct: 160 CQLHRERGHDTEDCNALIKEVERLLAQGYLIPFLKKDPSQDR------ERDKVRQQGPTL 213
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAP--EEFSKKCVKLDVQSEVSFLPQDLKL 118
+I+ I+ V + + + + + A E F + ++F P D +
Sbjct: 214 SEIL-IILGGSTTNVGVARNKRTRVGDQVLVAANQERFWYE--------PITFTPTDGRG 264
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I+ PH+ ALVIS + V RIL+DN S VNI+ + K+ ++ ++ PLIG
Sbjct: 265 IEYPHEYALVISTVMERHKVHRILVDNDSLVNIMSAEAMMKIGIDDSRMTLVPTPLIGIE 324
Query: 179 GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
G + F+V+ PYNAI+GR +H++R ST + L + T GI + +
Sbjct: 325 GTTV----PVKETFMVIITHHPYNAIIGRPLLHQLRAEVSTKYLTLKFPTSKGIVAVKRN 380
Query: 239 QATTRTCAS 247
Q +R CA+
Sbjct: 381 QEISRECAN 389
>gi|147803268|emb|CAN71051.1| hypothetical protein VITISV_003718 [Vitis vinifera]
Length = 491
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 11/135 (8%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+G
Sbjct: 332 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGRILSGFNGSS 391
Query: 182 TYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 392 TTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNE 451
Query: 231 GIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 452 GQTDLYGSQLAARQC 466
>gi|147782920|emb|CAN76814.1| hypothetical protein VITISV_044115 [Vitis vinifera]
Length = 507
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 331 IDGTIIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSL 390
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 391 AGLENPGRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNVILGRTWLHYM 450
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T ++ G Q R C
Sbjct: 451 KAIPSTYHQMVSFLTNEWQTDLYGSQLAARQC 482
>gi|147863995|emb|CAN80938.1| hypothetical protein VITISV_035835 [Vitis vinifera]
Length = 484
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P DL I PH DAL++S+++ + VRRIL+D GSS +++ + +
Sbjct: 308 IDGTIIFPPVDLTRILHPHRDALILSLEVEDFDVRRILVDPGSSTDLVQASVISHRGQSL 367
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ ++ L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 368 TGLENPKRILSGFNGSSTTSLGDIVLPVQAGPIALNVQFSVVQDLSPFNVILGRTWLHYM 427
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 428 KAIPSTYHQMVSFLTKDGQIDLYGSQLAARQC 459
>gi|147789466|emb|CAN66604.1| hypothetical protein VITISV_036968 [Vitis vinifera]
Length = 496
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 44/259 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR+L+ +E+LI G LK++++ E K +N +
Sbjct: 243 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHNPGAPRAPAAPKA 302
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
++N I P + +ER + F P +
Sbjct: 303 ----VINYINRGPSDEQYDSRRERTII--------------------------FPPVNPT 332
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
PH D L++S++ N +R IL + GSS +++ + V M ++ + L GF
Sbjct: 333 RTLHPHRDTLILSLEKRNFDMRCILXNPGSSTDLVQVSVVSHMGHSLAXLENPGRILSGF 392
Query: 178 SGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G +L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ +
Sbjct: 393 NGSSTTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRAWLHYMKAIPSTYHQMVSF 452
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 453 LTNEGQIDLYGSQLAARQC 471
>gi|77552432|gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1980
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H H T +CR + +E+ +++ + K + D++ QN + +IE P
Sbjct: 632 CHIHGPGGHSTEECRQMTHLLEKHVNRYENK-YEGARDQRGQNAIKAPQVMKIEAIEEVP 690
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
++++N I L V ++R Y R++ + + ++ +SF P+D + I
Sbjct: 691 KRVINAITGGSSLGVESKRQRKAYV--RQVNHVGTIYQSKPPVYSKTVISFGPEDAEGIL 748
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH D LV+S++I C V+R+LID GSS ++L +KM++ +D++ PL GF G
Sbjct: 749 FPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQ 808
Query: 181 VTYSDGSLLTDFLVVKATS---------------PYNAILGRQWIHKMRVVPSTYHQVLC 225
++ G + + K T+ YNAILGR I+ + +H +C
Sbjct: 809 QVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAI--IHHNYIC 866
Query: 226 YQ--TIYGIEEIGGDQATTRTCASNG 249
+ G+ + G+Q R G
Sbjct: 867 MKLPGPRGVITVRGEQLVARKYELQG 892
>gi|147789540|emb|CAN69591.1| hypothetical protein VITISV_001704 [Vitis vinifera]
Length = 429
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH DAL++ + IG+ VRRIL+ GSS ++L + +++M L ++ L GF+
Sbjct: 267 ILQPHRDALIMFLGIGDFDVRRILVYPGSSADLLQVSAIKQMGLVPSSLENMRWILSGFN 326
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G S G ++ F VV+ SP+NAILGR W+H M+ +PSTYHQ++ +
Sbjct: 327 GATITSLGDVVLSVQAGPIILNVQFSVVEDLSPFNAILGRTWLHYMKAIPSTYHQMVSFL 386
Query: 228 TIYGIEEIGGDQATTRTCASNGMGKQNRELGS 259
T G ++ G Q R C + RE+GS
Sbjct: 387 TEDGHIDLYGSQLAARQCY-----QIAREVGS 413
>gi|147844812|emb|CAN80646.1| hypothetical protein VITISV_028506 [Vitis vinifera]
Length = 378
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D + PH DAL++++ I VRRIL+D GS N+L + +++M
Sbjct: 167 IDGVILFPPVDPVRVLQPHRDALILTLGIDGFDVRRILVDPGSLANLLQVSVIKQMGFMP 226
Query: 165 DKIKPFEQPLIGFSGIVTYS-----------DGSLLTDFLVVKATSPYNAILGRQWIHKM 213
++ + L+GF+ T S +L FL+V+ SP+NAILGR W+H M
Sbjct: 227 SNLENLGRILLGFNEASTTSIEDIVLPIQVGPITLNVQFLMVEDLSPFNAILGRAWLHNM 286
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 287 KAIPSTYHQMVSFITKNGQIDLYGIQLAARQC 318
>gi|147781767|emb|CAN61299.1| hypothetical protein VITISV_027058 [Vitis vinifera]
Length = 434
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 60/239 (25%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR++ +E+LI G LK+++ + + Q + ++ P
Sbjct: 230 CAYHKEHGHTTEMCRSIYYLVEKLIRAGHLKQYLYSDTRAHQLHTAW-------DNWGGP 282
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
I TI+ P P D I
Sbjct: 283 RPIDGTIIFP------------------------------------------PVDPTRIL 300
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
H DA ++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+G
Sbjct: 301 QLHRDAFILSLEIGDFDVRRILVDLGSSTDLVQASVISHMGRNLTSLENPGRILSGFNGA 360
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
T S G ++ F V++ SP+N ILG W+H M+V+PSTYHQ++ + T
Sbjct: 361 STTSLGDIVLPIQADPVTLNVQFSVIQDLSPFNVILGHTWLHYMKVIPSTYHQMVSFLT 419
>gi|147818093|emb|CAN64725.1| hypothetical protein VITISV_003445 [Vitis vinifera]
Length = 508
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH BAL++S++IG+ VRRIL+D GS +++ + V M
Sbjct: 277 IDGTIIFPPVDPTRTLXPHRBALILSLEIGDFDVRRILVDPGSXADLVQASVVAHMGHSL 336
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ SP+N ILG W+H M
Sbjct: 337 AGLENPXRILSGFNGSSTTSLGDIILPVQAGPVILNVQFSVVQELSPFNIILGHTWLHYM 396
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 397 KAIPSTYHQMVSFLTNEGXIDLYGSQLAARQC 428
>gi|77555058|gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1889
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H H T +CR + +E+ +++ + K + D++ QN + +IE P
Sbjct: 632 CHIHGPGGHSTEECRQMTHLLEKHVNRYEDK-YEGARDQRGQNAIEAPQVMKIEAIEEVP 690
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
++++N I L V ++R Y R++ + + ++ +SF P+D + I
Sbjct: 691 KRVINAITGGSSLGVESKRQRKAYV--RQVNHVGTSYQSNPPVYSKTVISFGPEDAEGIL 748
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH D LV+S++I C V+R+LID GSS ++L +KM++ +D++ PL GF G
Sbjct: 749 FPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQ 808
Query: 181 VTYSDGSLLTDFLVVKATS---------------PYNAILGRQWIHKMRVVPSTYHQVLC 225
++ G + + K T+ YNAILGR I+ + +H +C
Sbjct: 809 QVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAI--IHHNYIC 866
Query: 226 YQ--TIYGIEEIGGDQATTRTCASNG 249
+ G+ + G+Q R G
Sbjct: 867 MKLPGPRGVITVRGEQLAARKYELQG 892
>gi|147861838|emb|CAN83182.1| hypothetical protein VITISV_037717 [Vitis vinifera]
Length = 566
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 24/235 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH + H T CR+L+ +E LI G LK++++ + + Q+ N K +
Sbjct: 266 CAFHKEHGHTTEACRSLQYLVERLIKAGHLKQYLRSDAGRKFTSQHHNPGTPK-----AP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E ++R + + I + + + ++F
Sbjct: 321 AAPKAVINYINRGPSDEEYDSRRKRQKLLRAASIRERINSIQPGLTGGGPRPIDGTITFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D SS +++ + V M ++ +
Sbjct: 381 PVDPTRTLQPHCDALILSLEIGDFDVRRILVDPSSSADLVQASVVGHMGHSLTDLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVV 216
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +
Sbjct: 441 ILSGFNGSSTTSLGDIILPVQDGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAI 495
>gi|109659800|dbj|BAE96745.1| GAG-POL precursor [Vitis vinifera]
Length = 167
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 11/135 (8%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 8 PHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGRILSGFNGSS 67
Query: 182 TYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 68 TTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVIFLTHD 127
Query: 231 GIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 128 GQIDLYGSQLAARQC 142
>gi|38194929|gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 66/311 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQN--------QNNFLKKDQ 52
C +H + H T C+ LK IEEL+ G L++FVK P++ + + + D+
Sbjct: 464 CQYHRNYGHTTEGCQALKDKIEELVQAGHLRKFVKTTITAPRSPQRDHDPRERSGRRDDR 523
Query: 53 IENS--------------------TSEPEQ----------IVNTIMAPL-----PLEVHM 77
++ + PE+ ++NTI P+ P E++
Sbjct: 524 TRDNHYRSSRRKRSESPIRRTRPKSESPERRSRTKQKVRTVINTIAGPVSLGQPPQEINY 583
Query: 78 TKERNV------YCKKREIEAPEEF-SKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVIS 130
+K+ + A + S + ++F +D I DD +VI+
Sbjct: 584 IAGGFAGGGCSNSARKKHLRAIQSVHSTPTQRRPHIPPITFTDEDFTAIDPSQDDPMVIT 643
Query: 131 IKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS-------GIV-- 181
++I + ++L+D GSSV+IL T +KM++ + +I+P+ + ++GFS G +
Sbjct: 644 VEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQIVGFSRERVDTKGFIDL 703
Query: 182 --TYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG-IEE 234
T+ D L +L+V A + YN +LGR I++++ + ST H + + ++ G I
Sbjct: 704 YTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGDIAT 763
Query: 235 IGGDQATTRTC 245
+ DQ T R C
Sbjct: 764 VHIDQKTAREC 774
>gi|147765594|emb|CAN71503.1| hypothetical protein VITISV_021014 [Vitis vinifera]
Length = 510
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V +
Sbjct: 334 IDGTIIFPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHIGHSL 393
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 394 ASLENPRRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYM 453
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G+Q C
Sbjct: 454 KAIPSTYHQMVSFLTNEGQIDLYGNQLAACQC 485
>gi|147854117|emb|CAN78581.1| hypothetical protein VITISV_013553 [Vitis vinifera]
Length = 509
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 44/254 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH D H T CR + +E LI G LK++++ + ++ NN +
Sbjct: 266 CAFHKDHGHTTETCRAFQFLVERLIKAGHLKQYLRTDTGNRDVSQHNN----PGAPRVSV 321
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
P+ +++ I P E ++R + I E + L + + F
Sbjct: 322 APKAVISYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDETIIF 379
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D P+ DAL++S++IG+ VRRIL+D G NI+
Sbjct: 380 PPVDPARTLQPYSDALILSLEIGDFDVRRILVDPG---NII------------------- 417
Query: 172 QPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
L +G VT L F VV+ SP+N ILGR W++ M+ +PSTYHQ++ + T G
Sbjct: 418 --LSVQAGPVT-----LNVQFSVVQELSPFNVILGRTWLYYMKAIPSTYHQMVSFLTNDG 470
Query: 232 IEEIGGDQATTRTC 245
++ G Q R C
Sbjct: 471 QIDLYGSQLAARQC 484
>gi|147838579|emb|CAN72119.1| hypothetical protein VITISV_012998 [Vitis vinifera]
Length = 508
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 37/249 (14%)
Query: 8 RHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENSTSEPEQIV 64
R CR+L+ +E I G LK+++ + + P+N+++ + I P+ I+
Sbjct: 261 RSLPETCRSLQYLVERPIKVGHLKQYLCSDARGRDTPRNRDSGSLRTPIS-----PKAII 315
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
N I PL+ +E N K++++ ++ V + F P D I PH
Sbjct: 316 NYIHGG-PLD----EEYNSKRKRQKLLRATSVRERGSAQPVDGTIIFPPVDPTRILQPHR 370
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
DAL++S+ +G+ D + V +M LE ++ L+GF+G+ T S
Sbjct: 371 DALILSLVMGD----------------FDASVVNQMGLELSDLENPGWVLLGFNGVATTS 414
Query: 185 DGSLL--------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIG 236
G ++ F VV SP+N ILGR W++ M+ +PSTYHQ++ + T G +
Sbjct: 415 LGDIVLPVQVTLNVQFSVVGDLSPFNVILGRAWLYYMKAIPSTYHQMVSFLTKDGQTNLY 474
Query: 237 GDQATTRTC 245
G Q R C
Sbjct: 475 GSQLAARQC 483
>gi|147857041|emb|CAN79655.1| hypothetical protein VITISV_001095 [Vitis vinifera]
Length = 455
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D + PH DAL++++++G+ V+RIL+D SS ++L A +++M ++ + L
Sbjct: 289 DPARVLQPHRDALILTLRVGDFDVKRILVDPSSSADLLQVAVIKQMSFIPSSLENLGRTL 348
Query: 175 IGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
GF+G T S G + F VV+ SP+NAILGR W+H M+VVPSTYHQ+
Sbjct: 349 SGFNGSSTTSLGDVTLPVQAGPVILNVLFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQM 408
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ + T G ++ Q + C
Sbjct: 409 VSFITQDGQIDLYESQLAAQQC 430
>gi|147835953|emb|CAN63969.1| hypothetical protein VITISV_007954 [Vitis vinifera]
Length = 451
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F DL + PH DALV+++ I + V+RIL+D GSS ++L + V++M
Sbjct: 275 IDGTIVFPTIDLARVLQPHRDALVMTLGIRDFDVKRILVDPGSSADLLQVSVVKQMGFIP 334
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ P+NAILGR W+H M
Sbjct: 335 SSLENPGRMLSGFNGASTTSLGDVILSIQAGPVILNVLFSVVEDLFPFNAILGRMWLHSM 394
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ + STYHQ++ + T G ++ G Q R C
Sbjct: 395 KAISSTYHQMVSFITQDGQVDLYGSQLAARQC 426
>gi|147798698|emb|CAN67612.1| hypothetical protein VITISV_011155 [Vitis vinifera]
Length = 438
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S +IG+ VRRIL+D SS +++ + V M
Sbjct: 286 IDGTIIFPPVDPTRTLQPHHDALILSQEIGDFDVRRILVDPVSSADLVQASVVSHMGHNL 345
Query: 165 DKIKPFEQPLIGFSGIVTYS-----------DGSLLTDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S +L FLVV+ SP+N ILGR W+H M
Sbjct: 346 TGLENPGRILSGFNGSSTTSLEDIVLSVQAGPVTLNVQFLVVQELSPFNIILGRTWLHYM 405
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 406 KAIPSTYHQMVSFLTNDGQIDLYGSQLAARQC 437
>gi|147818790|emb|CAN65037.1| hypothetical protein VITISV_007006 [Vitis vinifera]
Length = 271
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F P DL + PH DAL++++ I N VR+I +D SS+++L + ++M
Sbjct: 95 INGVITFPPVDLNRVLQPHQDALILTLGISNFDVRQIFVDPSSSIDLLQMSAFKQMEFPP 154
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T G ++ FLV++ SP+NAI+ R W+H M
Sbjct: 155 SALENLGRILSGFNGAFTTFLGDIMLPVQAKPVILNIQFLVIEDLSPFNAIMERTWLHGM 214
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PS YHQ++ Y G + G Q C
Sbjct: 215 KSIPSIYHQMVSYLIEDGQINLYGSQLAAHQC 246
>gi|147781722|emb|CAN76498.1| hypothetical protein VITISV_004732 [Vitis vinifera]
Length = 467
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 12/140 (8%)
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
+L+Q PH DAL++S++I N VRRIL+D GSS +++ + + M ++ + L G
Sbjct: 304 RLLQ-PHRDALILSLEIRNFDVRRILVDPGSSTDLVQASVISHMGHSLIGLENPGRILSG 362
Query: 177 FSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S G +L F VV+ SP+N ILGR W+H M+V+ STYHQ++
Sbjct: 363 FNGASTTSLGDIVLPVQVGPVTLNVQFSVVQDLSPFNVILGRTWLHYMKVIHSTYHQMVS 422
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 423 FLTKDGQVDLYGSQLAARQC 442
>gi|147773532|emb|CAN76263.1| hypothetical protein VITISV_000566 [Vitis vinifera]
Length = 508
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 65/264 (24%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+K Q+ N + ++ + P
Sbjct: 266 CAFHKEHGHTTETCRSLQKIXS-------------------QHHN-----PEAPSALTAP 301
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + + + + F P D
Sbjct: 302 KVVINYINGGPFNEEYDXRRKRQKLLRAASIRERINSIRPGLTRGGSRPIDGTIIFPPVD 361
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP-- 173
PH DAL +S++IG+ VRRIL+D GS E P
Sbjct: 362 PTRTLQPHRDALTLSLQIGDFDVRRILVDPGS----------------------LENPGR 399
Query: 174 -LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYH
Sbjct: 400 ILSGFNGSSTTSLGDIVLPVQADPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYH 459
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q +R C
Sbjct: 460 QMVSFLTNEGQTDLYGSQLASRQC 483
>gi|147788947|emb|CAN64846.1| hypothetical protein VITISV_014510 [Vitis vinifera]
Length = 729
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 107/254 (42%), Gaps = 65/254 (25%)
Query: 2 AFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPE 61
AFH H T CR L +E LI G LK+ +L+ D
Sbjct: 421 AFHKKHGHTTETCRCLHYLVERLIRAGHLKQ--------------YLRSD---------- 456
Query: 62 QIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQS 121
A P + EE+ K + + S + +
Sbjct: 457 -------AGGPFD-------------------EEYDSKQKRQKLLRAASVRERVNSIRPG 490
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF+G
Sbjct: 491 PHRDALILSLEIGDFDVRRILVDLGSSADLVQASVISHMGHSLTSLENPGRILSGFNGSS 550
Query: 182 TYS-----------DGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S +L F VV+ SP+N ILGR W+H M+V+PSTYHQ++ Y I
Sbjct: 551 TISLEDIVLSVQAGPVTLNIQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVVYPCIL 610
Query: 231 GIE----EIGGDQA 240
+ IGG Q
Sbjct: 611 AQQLRNHLIGGLQG 624
>gi|147821431|emb|CAN72343.1| hypothetical protein VITISV_002338 [Vitis vinifera]
Length = 482
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 66/259 (25%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H CR+L +++ +G + + + PQ S P
Sbjct: 251 CAFHKDHGHTIETCRSLHTS-AQILEEGTYLSIITLRPRGPQ---------------SPP 294
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+NT K RN C R+ + + +P
Sbjct: 295 R--LNTTPG--------VKGRNC-CGPRQYAS-----------------ALIPSG----- 321
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP---LIGF 177
PH DAL++S++IG+ VRRIL+D GSS +++ + + M + E P L GF
Sbjct: 322 RPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGLENPGXILSGF 378
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G ++ F VV+ SP+N ILGR +H M+ +PSTYHQ++ +
Sbjct: 379 NGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFNIILGRTXLHYMKAIPSTYHQMVSF 438
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 439 LTNEGQTDLYGSQLAARQC 457
>gi|46981243|gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1459
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 24/263 (9%)
Query: 4 HNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQI 63
H C H T +CR + +E+ + + K + V+ Q N K +IE P+++
Sbjct: 154 HGPCNHATEECRQMASLVEKHVRQYDGK-YEGVQGGQ--NMLEGQKVMKIEAIEEAPKRV 210
Query: 64 VNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPH 123
+N I L V ++R Y R+I + + +SF P+D + I PH
Sbjct: 211 INAITGGSSLGVESKRQRKAYV--RQIHHVGTSYQSVPPAYSNTVISFGPEDAEGILFPH 268
Query: 124 DDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTY 183
D LVIS++I C V+R+L+D GSS ++L +KM++ +D++ PL GF G +
Sbjct: 269 QDPLVISVEIAQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGHQVH 328
Query: 184 SDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ- 227
+ G + F VV YNA+LGR I+ + +H +C +
Sbjct: 329 TIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAVLGRSTINIFEAI--IHHNYICMKL 386
Query: 228 -TIYGIEEIGGDQATTRTCASNG 249
G+ + G Q R G
Sbjct: 387 PGPKGVISVRGGQLAARKFELQG 409
>gi|147766937|emb|CAN72129.1| hypothetical protein VITISV_022471 [Vitis vinifera]
Length = 508
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH H T +CR L +E LI G LK++++ E + QN N+ + +
Sbjct: 244 CVFHKKHGHITEECRCLHYLVERLIRAGHLKQYLRSEARSRDASQNHNSGAPR-----AP 298
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ P+ ++N I N E ++ + K V ++ + L
Sbjct: 299 TAPKAVINYI--------------NGGPFDEEYDSKRKRQKLLRAASVHERINSIRPGLT 344
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
D ++I I RIL++ GSS +++ + V M ++ + L GF
Sbjct: 345 GGGPCPIDGIIIFPPIDPTRTLRILVNPGSSDDLVQASFVSHMGHSLTGLENPGRILSGF 404
Query: 178 SGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G +L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ +
Sbjct: 405 NGSSTTSLGDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRTWLHYMKAMPSTYHQMVSF 464
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 465 LTNDGQIDLYGSQLAARQC 483
>gi|147828281|emb|CAN77711.1| hypothetical protein VITISV_039025 [Vitis vinifera]
Length = 480
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D PH DAL++S++IG+ VRRIL+D GS +++ + V M
Sbjct: 304 IDGTIIFPPVDPTQTLQPHHDALILSLEIGDFDVRRILVDPGSLADLVQASVVSHMGHSL 363
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ SP+N ILGR W+H M
Sbjct: 364 AGLENPGRILSGFNGSSTTSLGDIILPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYM 423
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T ++ G Q C
Sbjct: 424 KAIPSTYHQMVSFLTNEVQIDLYGSQLAAHQC 455
>gi|147781099|emb|CAN69448.1| hypothetical protein VITISV_007849 [Vitis vinifera]
Length = 500
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E LI G LK++++ + ++ + P
Sbjct: 248 CAFHKEHGHTTEACRSLQYLVERLIKAGHLKQYIRSD-----------VGGKVTSQHHNP 296
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
E AP V T R ++R I + + + F P D
Sbjct: 297 E-------APRAPTVPKTLLRAASNRER-INSIRPGLTGGGPRPINETIIFPPVDPTRTL 348
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 349 QPHRDALILSLEIGDFDVRRILVDPGSSADLVQTSVVGHMGHSLTGLENPGRVLSGFNGS 408
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N +V+PSTYHQ++ + T
Sbjct: 409 STTSLGDIILPVQAGPVTLNVQFSVVQKLSPFN-----------KVIPSTYHQMVSFLT- 456
Query: 230 YGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G ++ G Q R C + RE G++R
Sbjct: 457 EGHIDLYGSQLAARQCY-----QIAREAGTSR 483
>gi|147852044|emb|CAN82277.1| hypothetical protein VITISV_008350 [Vitis vinifera]
Length = 334
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL+++I +G+ V+RI +D SS ++L A +++M + ++ + L GF+G
Sbjct: 191 PHRDALILTIGVGDYDVKRISVDPSSSADLLQVAVIKRMGFKPSNLENPRRTLSGFNGSS 250
Query: 182 TYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
T S G ++ L SP NAILG W+H M+V+PSTYHQ + + T G ++ G Q T
Sbjct: 251 TTSLGDVILSDL-----SPSNAILGCTWLHGMKVIPSTYHQRVSFITQDGQIDLYGSQLT 305
Query: 242 TRTC 245
R C
Sbjct: 306 ARQC 309
>gi|147815943|emb|CAN77143.1| hypothetical protein VITISV_038338 [Vitis vinifera]
Length = 605
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F D + PH DAL++++ +G+ V+RIL+D GSS ++L A +++M
Sbjct: 429 IDGTIVFPTIDPARVLHPHRDALILTLGVGDFDVKRILVDLGSSADLLQVAVIKQMGFIP 488
Query: 165 DKIKPFEQPLIGFSGIVTYSDG--SLLTD---------FLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G +LL F VV+ SP+NAILG W+H M
Sbjct: 489 SSLENPGRTLSGFNGSSTTSLGDVTLLVQTGPVTLNVLFFVVEDLSPFNAILGCTWLHGM 548
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ + T G ++ Q R C
Sbjct: 549 KDIPSTYHQMVSFITQDGQIDLYRSQLAARQC 580
>gi|147853749|emb|CAN79563.1| hypothetical protein VITISV_020823 [Vitis vinifera]
Length = 536
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
+AL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G T S
Sbjct: 380 NALILSLEIGDFDVRRILVDPGSSADLIQASVVSHMGHSLAGLENPGRILSGFNGSSTTS 439
Query: 185 DGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G
Sbjct: 440 LGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQI 499
Query: 234 EIGGDQATTRTC 245
++ G Q R C
Sbjct: 500 DLYGSQLAARQC 511
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED 38
C FH D H T CR + +E LI G LK++++ ++
Sbjct: 266 CTFHKDHGHTTETCRAFQFLVERLIKAGHLKQYLRSDN 303
>gi|147801549|emb|CAN63601.1| hypothetical protein VITISV_010205 [Vitis vinifera]
Length = 295
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D + PH DA++++++I + VR+I +D SS+++L + ++M ++
Sbjct: 123 ITFPPVDPNRVLQPHQDAIILTLRISDFDVRQIFVDPSSSIDLLQMSAFKQMEFPPSALE 182
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L GF+G T S G ++ FLV++ SP+NAI+ R W+H M+ +P
Sbjct: 183 NLRRILSGFNGAFTTSLGDIMLPVQAEPVILNIQFLVIEDLSPFNAIMERTWLHGMKSIP 242
Query: 218 STYHQVLCY 226
S YHQ++ Y
Sbjct: 243 SIYHQMVSY 251
>gi|359488149|ref|XP_003633709.1| PREDICTED: uncharacterized protein LOC100853021 [Vitis vinifera]
Length = 587
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 50/273 (18%)
Query: 10 YTRDCRTL-KKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
+ RD T+ Y+ + + K V++ QP+ + + I+
Sbjct: 26 HQRDSATIYPSYLTQCVQGWDRKHLVRIGHMQPRPRRH--------------------IL 65
Query: 69 APLPLEVHMTKER----NVYCKKREIEAPEEFSKKCVKLD------VQSEVSFLPQDLKL 118
P P H++ E Y K +EI+ +L + + F P
Sbjct: 66 VPQP---HLSHEAIPHTKHYDKSKEIQQMSTLLGSISRLTSGSTHPIDGTIIFPPIYPIW 122
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH DAL+ S+ IG+ VRRIL++ SS ++L + V++M L ++ + L GF+
Sbjct: 123 ILQPHQDALIPSLGIGDFDVRRILVNPSSSADLLQVSVVKQMGLVPSSLENPRRVLSGFN 182
Query: 179 GIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G T G +L F +V+ SP+NAIL R W+H M+ +PSTYHQ++ Y
Sbjct: 183 GASTTFLGDVVLPVQAGPITLNVQFPIVEDLSPFNAILRRTWLHYMKAIPSTYHQMVSYL 242
Query: 228 TIYGIEEIGGDQATTRTCASNGMGKQNRELGST 260
T ++ G Q R C RE GS+
Sbjct: 243 TEDEQIDLYGSQLAARQCYQIA-----REAGSS 270
>gi|147783947|emb|CAN70250.1| hypothetical protein VITISV_028040 [Vitis vinifera]
Length = 504
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 33/259 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH H T +CR L +E LI G LK++++ E QN N+ + +
Sbjct: 240 CVFHKKHGHITEECRCLHYLVERLIRAGHLKQYLRSEAGSRDASQNHNSGAPR-----AP 294
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ P+ ++N I N E ++ + K V ++ + L
Sbjct: 295 TAPKAVINYI--------------NGGPFDEEYDSKRKRQKLLRAASVHKRINSIRPGLT 340
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
D +I I RIL++ GSS +++ + V M ++ + L GF
Sbjct: 341 GGGPCPIDGTIIFPPIDPTRTLRILVNPGSSDDLVQASFVSHMGHSLTGLENPRRILSGF 400
Query: 178 SGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+G T S G +L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ +
Sbjct: 401 NGSSTTSLGDIVLPVQADPVTLNVQFSVVQDLSPFNVILGRIWLHYMKAMPSTYHQMVSF 460
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G ++ G Q R C
Sbjct: 461 LTNDGQVDLYGSQLAARQC 479
>gi|158828306|gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]
Length = 498
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH+D LVI + IG+ V R+LI+ GS+++++ T+ +M+++ ++ P +P++GFSG
Sbjct: 2 PHNDPLVIMLAIGDHDVSRVLIETGSTIDVIFRKTLRQMKIDISRVSPTPRPVLGFSGER 61
Query: 182 TYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
+ G++ + DFLV + YN I+G W++ MR + STYH + + +
Sbjct: 62 LMTLGTIQLPVRAGGITKIVDFLVTDQPTIYNVIMGTPWLNLMRAIASTYHLCVKFSSPN 121
Query: 231 GIEEIGGDQATTRTCAS 247
G++ G+ T CAS
Sbjct: 122 GVKRY-GESKRTPGCAS 137
>gi|4680208|gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor]
gi|4378066|gb|AAD19359.1| polyprotein [Sorghum bicolor]
Length = 1877
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 106 QSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQD 165
++ ++F +DL+L PH DALVI+ + V RIL+D+GSS +I+ T ++M+L +
Sbjct: 617 RTPITFTEEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRS 676
Query: 166 KIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQWI 210
+++P E PLIGF G ++ G + F VV PYNAI GR ++
Sbjct: 677 QLQPSESPLIGFGGKQIHALGKVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGFL 736
Query: 211 HKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTR 243
+K + + ++G+ + G Q R
Sbjct: 737 NKFNAAAHMGYLCMKIPALHGVITVHGSQKEAR 769
>gi|147795700|emb|CAN61203.1| hypothetical protein VITISV_041580 [Vitis vinifera]
Length = 505
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + + M + I P + +G V
Sbjct: 370 PHRDALILSLEIGDFDVRRILVDLGSSADLVQASVISHM--GHNIILPVQ------AGPV 421
Query: 182 TYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
T L F VV+ SP+N ILG W+H M+ +PSTYHQ++ + T G ++ G Q
Sbjct: 422 T-----LNVQFSVVQELSPFNIILGHTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQLA 476
Query: 242 TRTC 245
R C
Sbjct: 477 ARQC 480
>gi|147787922|emb|CAN76129.1| hypothetical protein VITISV_043916 [Vitis vinifera]
Length = 340
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 12 RDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIMAPL 71
R L +E LI LK++V +Q + N + Q ++ P+ ++N I
Sbjct: 106 RRANNLHYLVERLIRVEHLKQYVCAIGRQRETTRNLVV--QALTFSTAPKVVINYIH--- 160
Query: 72 PLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISI 131
E + + N KK+ + V ++F P + + PH+ LV+++
Sbjct: 161 --EGPVDERYNFKWKKQSMRL------------VDGTITFPPINASRVLQPHEYVLVLTL 206
Query: 132 KIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD 191
+ VRR+LID GSS N+L + ++M ++ + L F+G T S +
Sbjct: 207 GMSGFDVRRVLIDPGSSANLLQMSAYKQMGYSLSTLENPGRILSRFNGATTTSQXDV--- 263
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
V+ S +N I+GR W+H+++V+PS YHQ++ Y T G + G Q T C
Sbjct: 264 --VLPDLSHFNVIMGRAWLHRIKVIPSMYHQMVSYLTEEGQIDFLGSQLATHQC 315
>gi|5262172|emb|CAB45815.1| putative protein [Arabidopsis thaliana]
gi|7268845|emb|CAB79049.1| putative protein [Arabidopsis thaliana]
Length = 853
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 106 QSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQD 165
Q + F +D IQ PH+DALVI + + + V RILID GSSVN++ T+ KM + +
Sbjct: 460 QEPIIFTSEDASGIQHPHNDALVIKLVMEDFDVERILIDTGSSVNLMFLKTLFKMGISES 519
Query: 166 KIKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMR 214
KI P +P+ G+ G S G + T F+V+ + YNAILG WI+ M+
Sbjct: 520 KIMPKIRPMTGYDGEAKMSIGEIKLQVQVGGITQKTKFVVIDSEPIYNAILGSPWIYSMK 579
Query: 215 VVPST 219
+PST
Sbjct: 580 AIPST 584
>gi|147863289|emb|CAN80483.1| hypothetical protein VITISV_015090 [Vitis vinifera]
Length = 441
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PH DAL++S++IG+ VRRIL+D GSS +++ + M ++ + L GF+
Sbjct: 282 PHRDALIMSLEIGDFDVRRILVDPGSSTDLIQASVASHMGHSLTGLENPGRILSGFNRSS 341
Query: 182 TYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
T S G ++ F VV+ P+N ILGR W+H M+V+PSTYHQ++ + T
Sbjct: 342 TTSLGDIVLPVQAGPVTLNVQFSVVQELLPFNIILGRTWLHYMKVIPSTYHQMVSFLTSE 401
Query: 231 GIEEIGGDQATTRTC 245
G ++ Q R C
Sbjct: 402 GQIDLYDSQLAARQC 416
>gi|147862525|emb|CAN81502.1| hypothetical protein VITISV_030487 [Vitis vinifera]
Length = 682
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D I PH DAL++S++IG+ VRRI + G+S +++ + + M
Sbjct: 533 IDGTIIFPPVDPTRILQPHRDALILSLEIGDFDVRRIRVYPGNSTDLVQASVISHMGRSL 592
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L GF+G T S G ++ F VV+ S +N ILGR W+H M
Sbjct: 593 TGLEIPGRILSGFNGASTTSLGDIVLPVQAGPVTLNVQFSVVQDLSSFNVILGRTWLHYM 652
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQ 239
+V+PSTYHQ++ + T G ++ G Q
Sbjct: 653 KVIPSTYHQMVSFLTKDGQVDLYGSQ 678
>gi|224090917|ref|XP_002309115.1| predicted protein [Populus trichocarpa]
gi|222855091|gb|EEE92638.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 46/228 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T +C LKK +E L+++G LK+ +K K +E E
Sbjct: 104 CQFHREKGHDTENCYALKKEVERLLAQGYLKQCLK-------------KDPSLEGEGDEA 150
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
Q + M ER + + +E K KL ++F P D + I+
Sbjct: 151 RQ-----------QRPMLPERTRLGDQDLVTMGQE--KFWHKL-----ITFTPVDGQGIK 192
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DALV SI + V RIL+D+GSS+NIL + M ++ ++ PLIG G
Sbjct: 193 YPHRDALVFSIIMEGHRVHRILVDSGSSMNILSTKAITNMGIDASRMTLVSTPLIGIEGS 252
Query: 181 VTYSDGS---------------LLTDFLVVKATSPYNAILGRQWIHKM 213
G+ L F+++ PYNAI+GR +H++
Sbjct: 253 AVPVKGATRLIVIMGTAPCCVTLQKTFIIIDTHPPYNAIIGRPLLHQL 300
>gi|147819530|emb|CAN65354.1| hypothetical protein VITISV_012645 [Vitis vinifera]
Length = 381
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F D + PH D L++++ I + VRRIL+D GSS ++L T +++
Sbjct: 229 IDGTITFPSIDPNRVLHPHQDVLILTLGINDFDVRRILVDLGSSADLLQMFTFKQIGFSS 288
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKM 213
++ + L+GF+G S G ++ F +V+ S +N I+ R W+H M
Sbjct: 289 SALENLRKILLGFNGASMTSLGDVVLPVQAKPVVLNVQFSIVEDLSLFNTIMERTWLHDM 348
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +PSTYHQ++ Y T G + G Q + C
Sbjct: 349 KTIPSTYHQMVSYLTKDGHVNLFGSQLAAQQC 380
>gi|356510495|ref|XP_003523973.1| PREDICTED: uncharacterized protein LOC100812732 [Glycine max]
Length = 1456
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 21/260 (8%)
Query: 1 CAFHNDC-RHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE 59
C +H H C LK ++ L+ G EF+++ Q+ F +Q+ N T
Sbjct: 161 CKYHGGAPGHSIEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPA 212
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
++ +M+ P + K N ++I E F + + ++F +++
Sbjct: 213 RVSLLELLMSSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAE 271
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
H+ AL +S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 272 GRGHNKALHVSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDG 331
Query: 180 I-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
V + F ++ PY+ +LGR WIH + VVPST HQ L +
Sbjct: 332 TRREVRGEIDLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVA 391
Query: 229 IYGIEEIGGDQATTRTCASN 248
+ + G++ +C S+
Sbjct: 392 EGNLVIVSGEEDILVSCPSS 411
>gi|147821377|emb|CAN65668.1| hypothetical protein VITISV_022190 [Vitis vinifera]
Length = 451
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 71/265 (26%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR+L +E+LI G LK++++V+ + + P
Sbjct: 213 CAYHKEHGHTTETCRSLHYLVEKLIRAGHLKQYLRVDAR------------------AAP 254
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS--------EVSF 111
+ I+N I PL E +R + + ++L + + F
Sbjct: 255 KAIINYINGGPLDDEYDSKWKRQRLLRAASVRE----RVNSIRLGITGGGPRPIDETIIF 310
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
DL I PH D L++ +G L+ ++N +
Sbjct: 311 PSVDLTRILQPHRDTLIL--HMGRNLIG---LENLGRI---------------------- 343
Query: 172 QPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
L GF+G+ T S G ++ F VV+ SP+N ILGR W+H M+V+PSTY
Sbjct: 344 --LSGFNGVTTTSLGDIVLSVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKVIPSTY 401
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G + G Q R C
Sbjct: 402 HQMVSFLTEDGQINLYGSQLAARQC 426
>gi|356502974|ref|XP_003520289.1| PREDICTED: uncharacterized protein LOC100784699 [Glycine max]
Length = 1826
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 438 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 489
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 490 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 548
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 549 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRREVRGEI 608
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 609 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 668
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 669 EEDILVSCPSS 679
>gi|116310100|emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]
Length = 2933
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E++F +D + S H+ L I IG +RRILID GS+VNIL ++ +
Sbjct: 1466 NEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLTRAGFTTKD 1525
Query: 167 IKPFEQPLIGFS-------GIVT----YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
++P + + GF G +T S S F V++A + Y+A+LGR WIHK RV
Sbjct: 1526 LEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGRPWIHKYRV 1585
Query: 216 VPSTYHQVLCY 226
VPST HQ L +
Sbjct: 1586 VPSTLHQCLKF 1596
>gi|218195281|gb|EEC77708.1| hypothetical protein OsI_16788 [Oryza sativa Indica Group]
gi|222629278|gb|EEE61410.1| hypothetical protein OsJ_15603 [Oryza sativa Japonica Group]
Length = 1108
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E++F +D + S H+ L I IG +RRILID GS+VNIL ++ +
Sbjct: 872 NEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLTRAGFTTKD 931
Query: 167 IKPFEQPLIGFS-------GIVT----YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
++P + + GF G +T S S F V++A + Y+A+LGR WIHK RV
Sbjct: 932 LEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGRPWIHKYRV 991
Query: 216 VPSTYHQVLCYQTIYGIEE--IGGDQATT 242
VPST HQ L + G ++ +G + T
Sbjct: 992 VPSTLHQCLKFLDGKGAQQRIVGNSSSYT 1020
>gi|147811798|emb|CAN74866.1| hypothetical protein VITISV_002409 [Vitis vinifera]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH++AL++ + +G VRRIL+D G SV+ L KM ++ + L GF+
Sbjct: 130 VLQPHENALILMLGMGGFDVRRILVDPGGSVDHLQMLAYRKMGYSPSTLENPRRLLSGFN 189
Query: 179 GIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
G T S G ++ F +V SPYNAI+G W+HKM+V+P TYHQ+
Sbjct: 190 GTTTTSIGDVMLHVQADPVTMSVRFSMVDDLSPYNAIMGHAWLHKMKVIPFTYHQM 245
>gi|9927274|dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
Length = 2876
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E++F +D + H+ L I IG+ +RRILID GS+VNIL ++ +
Sbjct: 1362 NEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLTRAGFTTKD 1421
Query: 167 IKPFEQPLIGFS-------GIVT----YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
++P + + GF G +T S S F V++A + Y+A+LGR WIHK RV
Sbjct: 1422 LEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGRPWIHKYRV 1481
Query: 216 VPSTYHQVLCYQTIYGIEE 234
VPST HQ L + G+++
Sbjct: 1482 VPSTLHQCLKFLDGNGVQQ 1500
>gi|356566411|ref|XP_003551425.1| PREDICTED: uncharacterized protein LOC100794033 [Glycine max]
Length = 1199
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 252 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 303
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 304 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 362
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 363 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRREVRGEI 422
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 423 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 482
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 483 EEDILVSCPSS 493
>gi|38567867|emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]
Length = 2657
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E++F +D + S H+ L I IG +RRILID GS+VNIL ++ +
Sbjct: 1444 NEITFADEDNIIEGSDHNRPLYIEGNIGPAHLRRILIDPGSAVNILPVRSLTRAGFTTKD 1503
Query: 167 IKPFEQPLIGFS-------GIVT----YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
++P + + GF G +T S S F V++A + Y+A+LGR WIHK RV
Sbjct: 1504 LEPTDMVICGFDNQGKSTLGAITVKIQMSTFSFKVHFFVIEANTSYSALLGRPWIHKYRV 1563
Query: 216 VPSTYHQVLCY 226
VPST HQ L +
Sbjct: 1564 VPSTLHQCLKF 1574
>gi|356523394|ref|XP_003530325.1| PREDICTED: uncharacterized protein LOC100777325 [Glycine max]
Length = 1159
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 207 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARISLLELLM 258
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 259 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 317
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 318 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRQEVRGEI 377
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 378 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 437
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 438 EEDILVSCPSS 448
>gi|147836363|emb|CAN62093.1| hypothetical protein VITISV_034669 [Vitis vinifera]
Length = 483
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 14 CRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTI-MAPLP 72
CR L ++ LI G LK++++ + + N + + P+ I+N I P
Sbjct: 267 CRCLHYLVKRLIRAGHLKQYLRSDARGRDXSRN--HNSGTPRAPAAPKAIINYINGGPFD 324
Query: 73 LEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIK 132
+ ++R + + + + + D ++I
Sbjct: 325 EKYDSKRKRQTLLRAASVRERVNSIRPGITGGGPRPI---------------DGIIIFPL 369
Query: 133 IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG------ 186
IG+ VRRIL+D GSS ++ A++ R+ L GF+G S G
Sbjct: 370 IGDFDVRRILVDPGSSADL---ASINPGRI-----------LSGFNGASXTSLGDIVLPV 415
Query: 187 -----SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
+L F VV+ SP+N ILGR W+H M+V+PSTYHQ++ + T G ++ G Q
Sbjct: 416 QAGPATLKVQFSVVQDLSPFNVILGRTWLHYMKVIPSTYHQMVSFLTKDGQIDLYGSQLA 475
Query: 242 TRTC 245
R C
Sbjct: 476 ARQC 479
>gi|147821496|emb|CAN67783.1| hypothetical protein VITISV_004474 [Vitis vinifera]
Length = 531
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 46/266 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGXRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEA------PEEFSKKCVKLDVQSEVS 110
P+ ++N I P E ++R + I P + +D +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRXRINSIXPGLXGEGPRPID--GTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ L GF+G T S G ++ F VV+ SP+N
Sbjct: 439 GRILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFN----------------- 481
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
HQ++ + T G ++ G Q R C
Sbjct: 482 -HQMVSFLTNEGQTDLYGSQLAARQC 506
>gi|147784166|emb|CAN70586.1| hypothetical protein VITISV_013306 [Vitis vinifera]
Length = 531
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
P+ ++N I P E ++R + I + + + + + F
Sbjct: 323 --PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ +
Sbjct: 381 PVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENPGR 440
Query: 173 PLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L GF+G T S G ++ F VV+ SP+N H
Sbjct: 441 ILSGFNGSSTTSLGDIILPVRAGPVTLNVQFSVVQELSPFN------------------H 482
Query: 222 QVLCYQTIYGIEEIGGDQATTRTC 245
Q++ + T G ++ G Q R C
Sbjct: 483 QMVSFLTNEGQTDLYGSQLAARQC 506
>gi|356551150|ref|XP_003543941.1| PREDICTED: uncharacterized protein LOC100803865 [Glycine max]
Length = 1207
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 245 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 296
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 297 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 355
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 356 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDGTRREVRGEI 415
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 416 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 475
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 476 EEDILVSCPSS 486
>gi|356565902|ref|XP_003551175.1| PREDICTED: uncharacterized protein LOC100813923 [Glycine max]
Length = 1292
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +++ N T ++ +M
Sbjct: 221 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEKL-NKTPARVSLLELLM 272
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ + H+ AL
Sbjct: 273 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPVEGRGHNKALH 331
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 332 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRREVRGEI 391
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 392 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 451
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 452 EEDILVSCPSS 462
>gi|356551506|ref|XP_003544115.1| PREDICTED: uncharacterized protein LOC100783732 [Glycine max]
Length = 1229
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 218 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPGRVSLLELLM 269
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 270 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 328
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL 188
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G G +
Sbjct: 329 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNVSHLKPSSMVVRAFDGTRREVRGEI 388
Query: 189 -----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 389 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 448
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 449 EEDILVSCPSS 459
>gi|356506670|ref|XP_003522099.1| PREDICTED: uncharacterized protein LOC100817680 [Glycine max]
Length = 1197
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 251 HSIEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 302
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 303 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 361
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 362 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDGTRREVRGEI 421
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 422 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 481
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 482 EEDILVSCPSS 492
>gi|356502987|ref|XP_003520295.1| PREDICTED: uncharacterized protein LOC100793173 [Glycine max]
Length = 1150
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 199 HSIEKCMALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 250
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 251 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 309
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 310 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDGTRREVRGEI 369
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 370 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 429
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 430 EEDILVSCPSS 440
>gi|147844599|emb|CAN80066.1| hypothetical protein VITISV_035228 [Vitis vinifera]
Length = 961
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Query: 133 IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS-------- 184
+G+ VRRILID GSS ++L + + M + ++ + L GF+G+VT S
Sbjct: 1 MGDFDVRRILIDPGSSTDLLQTSVIGHMGRDLSGLENLGRILSGFNGVVTTSLRDIVLPV 60
Query: 185 -DGSLLTD--FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
GS+ + FLVV+ SP+NAILG W+H M+V+PSTY+Q++ + T G ++ G Q
Sbjct: 61 QAGSVTLNVQFLVVQDLSPFNAILGLTWLHYMKVIPSTYYQMVSFLTEDGQIDLHGSQEF 120
Query: 242 T 242
T
Sbjct: 121 T 121
>gi|356541586|ref|XP_003539255.1| PREDICTED: uncharacterized protein LOC100809507 [Glycine max]
Length = 1322
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 248 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 299
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 300 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPTEGRGHNKALH 358
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 359 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRREVRGEI 418
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR W H + VVPST HQ L + + + G
Sbjct: 419 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWFHSVGVVPSTLHQKLKFVVEGHLVIVSG 478
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 479 EEDILVSCPSS 489
>gi|147790885|emb|CAN72653.1| hypothetical protein VITISV_019105 [Vitis vinifera]
Length = 741
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH DAL+IS+ + + VR I++D GSS ++L + +++M LE ++ L GF+
Sbjct: 384 ILQPHRDALIISLGMRDFDVRWIIVDPGSSTDLLQASVIKQMGLELSDLENHGWILSGFN 443
Query: 179 GIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
S G +L F VV+ S +NAILGR W+H M+ + STYHQ++ +
Sbjct: 444 EASITSLGDVVLPVQAGLVTLNVQFSVVEYLSSFNAILGRTWLHYMKAILSTYHQMVSFL 503
Query: 228 TIYGIEEIGGDQATTRTC 245
T ++ G Q R C
Sbjct: 504 TKDEQIDLYGSQLAARQC 521
>gi|356565922|ref|XP_003551185.1| PREDICTED: uncharacterized protein LOC100779154 [Glycine max]
Length = 1946
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 532 HSIEKCMALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 583
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 584 SSEPHRALLVKVLNEAHVAQDISV-EGFEGLVNNITANNYLAFAEEEIPAEGRGHNKALH 642
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 643 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDGTRREVRGEI 702
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 703 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 762
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 763 EEDILVSCPSS 773
>gi|356506918|ref|XP_003522220.1| PREDICTED: uncharacterized protein LOC100800605 [Glycine max]
Length = 1467
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 203 HSIEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 254
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 255 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 313
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T++K+ +KP + F G
Sbjct: 314 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDGTRREVRGEI 373
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 374 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 433
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 434 EEDILVSCPSS 444
>gi|108706251|gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 52 QIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSF 111
+IE P++++N I L V ++R Y R+I + + +SF
Sbjct: 33 KIEAIEEAPKRVINAITGGSSLGVESKRQRKAYV--RQINHVGTSYQSIPPAYSNTVISF 90
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P+D + I PH D LVIS++I C V+R+L+D GSS ++L +KM++ +D++
Sbjct: 91 GPEDAEGILFPHQDPLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAG 150
Query: 172 QPLIGFSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVV 216
PL GF G ++ G + F VV YNAILGR I+ +
Sbjct: 151 IPLQGFGGQQVHAIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIFEAI 210
Query: 217 PSTYHQVLCYQ--TIYGIEEIGGDQATTRTCASNG 249
+H +C + G+ + G Q R G
Sbjct: 211 --IHHNYICMKLPGPKGVISVRGGQLAARKFELQG 243
>gi|356566094|ref|XP_003551270.1| PREDICTED: uncharacterized protein LOC100784162 [Glycine max]
Length = 1145
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C K ++ LI G EF+ + Q+ F +Q+ N T ++ +M
Sbjct: 196 HSIEKCLAFKYKVQHLIDAGC--EFLCI-----IQQSEFKVIEQL-NKTPARVSLLELLM 247
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 248 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNIAANNYLAFAEEEIPAEGRGHNKALH 306
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F+G
Sbjct: 307 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFNGTRREVRGEI 366
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 367 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 426
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 427 EEDILVSCPSS 437
>gi|147777291|emb|CAN60289.1| hypothetical protein VITISV_011784 [Vitis vinifera]
Length = 884
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 42/225 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H D H CR+L +E+L+ G LK++V+ K ++ + + + + P
Sbjct: 353 CDYHKDHGHTIETCRSLHYMVEDLLKVGHLKQYVRTAPKGERSSHG-----RGPRAPAAP 407
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ V + PL+ + +R ++R + A + +
Sbjct: 408 VRAVINYIHGGPLDDEYSSKRK---RQRLLRA-----------------------ATVRE 441
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++++ +G+ ++RIL+D GSS ++L A +++M ++ + L GF+G
Sbjct: 442 HPHRDALILALGVGDFDMKRILVDPGSSADLLQVAVIKQMGFIPSSLENPGRILSGFNGS 501
Query: 181 VTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMR 214
T S G + F VV+ S +NAILGR W+H M+
Sbjct: 502 STTSLGDITLPVQAGPVILNILFSVVEDLSHFNAILGRTWLHGMK 546
>gi|356503020|ref|XP_003520310.1| PREDICTED: uncharacterized protein LOC100811791 [Glycine max]
Length = 1289
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ G EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 225 HSVEKCLALKYKVQHLMDAGC--EFLRI-----IQQSEFKVIEQL-NKTPTRVSLLELLM 276
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F+ +++ H+ L
Sbjct: 277 SSKPHRALLVKVLNEAHVAQDISI-EGFGGLVNNITANNYLAFVEEEIPAEGRGHNKDLH 335
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F G
Sbjct: 336 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDGTRREVRGEI 395
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 396 DLPVQIGPHTCQVTFQIMDINPPYSYLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 455
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 456 EEDILVSCPSS 466
>gi|147807927|emb|CAN62152.1| hypothetical protein VITISV_032404 [Vitis vinifera]
Length = 660
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 57/261 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H D H CR+L +E L+ +G LK++V+ K + + + I +
Sbjct: 417 CAYHKDHGHTAEACRSLHLLVENLLKEGHLKQYVRAATKSGEPSRDHGLRGPI----APV 472
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
I+N I PL E + ++R + + I+
Sbjct: 473 RAIINYIHGGPLDEEYNSKRKRQILLRAATIQE--------------------------- 505
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF-EQP---LI 175
H ++ + G+ + NG V D +R E+D + E P L
Sbjct: 506 ---HKSSIRPGLTSGS-----VHPINGPIV--FPDIRDWGLRCEKDTSRSGQENPGRMLS 555
Query: 176 GFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GF+G T S G ++ F VV+ SP+NAILGR W+H M+V+PSTYHQ++
Sbjct: 556 GFNGASTTSLGDVILPIQAGPVILNVLFSVVEDLSPFNAILGRTWLHSMKVIPSTYHQMV 615
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
+ T G ++ G Q R C
Sbjct: 616 SFITHDGQVDLYGSQLVARQC 636
>gi|147864947|emb|CAN79366.1| hypothetical protein VITISV_036684 [Vitis vinifera]
Length = 423
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 134 GNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL---- 189
G+ VRRILID GSS +++ + + M +K + L+GF+ T S G ++
Sbjct: 300 GDFDVRRILIDPGSSADLVQASVISHMGHSLTGLKNLGRILLGFNWSSTTSLGDIVLSVQ 359
Query: 190 -------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATT 242
F VV+ P+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q T
Sbjct: 360 AGPVTLNVQFSVVQDLIPFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLPT 419
Query: 243 RTC 245
R C
Sbjct: 420 RQC 422
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE 37
CAFH + H T CR L +E LI G LK++++ +
Sbjct: 262 CAFHKEHGHTTETCRCLHYLVERLIRAGHLKQYLRSD 298
>gi|242254054|gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 90 IEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSV 149
+E P +F + ++F +D+KL PH DA+VI + V +IL+D GSS
Sbjct: 631 VEGPHKFGRWS-----HIPITFDSRDMKLRDYPHTDAMVIETNLAGWTVTKILVDTGSSA 685
Query: 150 NILDDATVEKMRLEQDKIKPFEQPLIGFSG-----------IVTYSDG----SLLTDFLV 194
+IL +T + M+L+++ ++P + PL GF G VT+ D + F V
Sbjct: 686 DILFASTFDSMKLDRNLLQPADNPLYGFGGQQVRAVGKISLPVTFGDQINCRTEHITFDV 745
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASN-GMGKQ 253
V PYNAI GR + V + + G+ + GDQ R N G++
Sbjct: 746 VDMFYPYNAIFGRGVTNAFNAVIHPAYLCMKLPAPKGVVAVYGDQDIARAAEGNVAPGQR 805
Query: 254 N 254
N
Sbjct: 806 N 806
>gi|147799109|emb|CAN63705.1| hypothetical protein VITISV_013105 [Vitis vinifera]
Length = 516
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
C FH + H T +CR L +E LI LK++++ + QN N K +
Sbjct: 252 CVFHKEHGHTTEECRCLHYLVERLIKARHLKQYLRSDTGGRDVSQNHNTGAPK-----AP 306
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ ++N I P E ++R + + I + + + + F
Sbjct: 307 AVPKAVINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIQPGITGGAPRPIDGTIMFP 366
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D I PH DAL++S++IG+ VRRILID GSS ++ + V M ++ +
Sbjct: 367 PVDPTQILHPHLDALIMSLEIGDFDVRRILIDPGSSAYLVQASVVSHMGHSLIGLENPGR 426
Query: 173 PLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILG 206
L GF+G+ T S G +L F +V+ SP+N ILG
Sbjct: 427 ILSGFNGLSTMSLGDIVLPVQAGPVALNVQFSMVQDLSPFNVILG 471
>gi|147822691|emb|CAN63934.1| hypothetical protein VITISV_000168 [Vitis vinifera]
Length = 839
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+ PH+DAL+++++I + VR IL+D S ++L T ++M ++ + + GF+G
Sbjct: 246 EQPHEDALILTLRINDFDVRWILVDPDSLTDLLQMFTFKQMGFPPSALENPRRIISGFNG 305
Query: 180 IVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
+T S G +L F V++ SP+N I+G W+H M+V+PSTYHQ+ Q
Sbjct: 306 ALTTSLGDVLLPVQVGSVIQNAQFSVMEDLSPFNTIMGGTWLHGMKVIPSTYHQMPIRQK 365
Query: 229 I 229
+
Sbjct: 366 V 366
>gi|147822788|emb|CAN68292.1| hypothetical protein VITISV_044076 [Vitis vinifera]
Length = 529
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
Query: 86 KKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDN 145
K +E E+ +F K+ ++ +Q E + + L+L ++DALV+++ +G +RR+L+D
Sbjct: 59 KLQENESLRDFMKRFEQVVLQVESCSVNRVLQL----YEDALVLTLGVGKFDMRRLLVDP 114
Query: 146 GSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG--IVTYSDG---------SLLTDFLV 194
GSSV++ + +KM ++ L F+G + + SD +L FL+
Sbjct: 115 GSSVDLFKMSAYKKMSYSPSALENLRCLLSRFNGATMTSLSDVVLPVQVGPVTLNIQFLM 174
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
V SPYN I+ R W+ KM+V+PSTYHQ++ Y
Sbjct: 175 VDDLSPYNPIMRRAWLRKMKVIPSTYHQMVSY 206
>gi|147865861|emb|CAN78972.1| hypothetical protein VITISV_006186 [Vitis vinifera]
Length = 481
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL--------- 189
RRIL+D GSSV+++ + V M ++ + L GF+G T S G ++
Sbjct: 339 RRILVDPGSSVDLVQASVVAHMGHSLAGLENPGRILSGFNGSSTTSLGDIILPVQAGPVT 398
Query: 190 --TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 399 LNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQLAARQC 456
>gi|356510620|ref|XP_003524035.1| PREDICTED: uncharacterized protein LOC100801712 [Glycine max]
Length = 1186
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C LK ++ L+ + EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 199 HSVEKCLALKYKVQHLMDEAN--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 250
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 251 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 309
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F
Sbjct: 310 VSVKCIDHVVAKVLIDNGSSLNVMPTSTLEKLPFNASHLKPSSMVVRAFDDTRREVRGEI 369
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 370 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 429
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 430 EEDILVSCPSS 440
>gi|356566034|ref|XP_003551240.1| PREDICTED: uncharacterized protein LOC100800043 [Glycine max]
Length = 1267
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 20/251 (7%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H C K ++ L+ + EF+++ Q+ F +Q+ N T ++ +M
Sbjct: 263 HSVEKCLAFKYKVQHLMDEAS--EFLRI-----IQQSEFKVIEQL-NKTPARVSLLELLM 314
Query: 69 APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALV 128
+ P + K N ++I E F + + ++F +++ H+ AL
Sbjct: 315 SSEPHRALLVKVLNEAHVAQDISV-EGFGGLVNNITANNYLAFAEEEIPAEGRGHNKALH 373
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-------- 180
+S+K + +V ++LIDNGSS+N++ +T+EK+ +KP + F
Sbjct: 374 VSVKCMDHIVAKVLIDNGSSLNVMPKSTLEKLPFNASHLKPSSMVVRAFDDTRQEVRGEI 433
Query: 181 ---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
V + F ++ PY+ +LGR WIH + VVPST HQ L + + + G
Sbjct: 434 DLPVQIGPHTCQVTFQIMDINPPYSCLLGRPWIHSVGVVPSTLHQKLKFVVEGHLVIVSG 493
Query: 238 DQATTRTCASN 248
++ +C S+
Sbjct: 494 EEDILVSCPSS 504
>gi|147790279|emb|CAN67735.1| hypothetical protein VITISV_012279 [Vitis vinifera]
Length = 476
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH + H T CR L +E LI G LK++++ + QN N+ + +
Sbjct: 240 CAFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLRSDAGGRDASQNHNS-----RAPRAP 294
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ + ++N I + ++ + ++ + + + + F P DL
Sbjct: 295 AASKVVINYING-------GPSDEDIGTRAYQLHPAWDNWGEGRPRPIDGTIIFPPVDLT 347
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
I PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++ + L GF
Sbjct: 348 RILQPHRDALIMSLEIGDFDVRRILVDLGSSADLVQASVISHMGHSLTGLENLGRILSGF 407
Query: 178 SGIVTYSDGSLLTDFLVVKATS 199
+G T S G ++ L V+A S
Sbjct: 408 NGSSTTSLGDIV---LPVQAGS 426
>gi|147780890|emb|CAN61712.1| hypothetical protein VITISV_034503 [Vitis vinifera]
Length = 668
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
D +I IG+ VR IL+D GSS +++ + V + ++ + L GF+G+ T S
Sbjct: 513 DGTIIFPPIGDFDVRCILVDLGSSTDLVQASVVSHIGHSLTGLENSGRILSGFNGLSTTS 572
Query: 185 DGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G
Sbjct: 573 LGDIILPVQAGLVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNEGQI 632
Query: 234 EIGGDQATTRTC 245
++ Q R C
Sbjct: 633 DLYXSQLAARQC 644
>gi|147774655|emb|CAN67703.1| hypothetical protein VITISV_035851 [Vitis vinifera]
Length = 335
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P DL + PH AL++++ I + VRRIL+D GSS N+L + ++M ++
Sbjct: 187 ITFPPIDLNRVLQPHQYALILTLGINDFDVRRILVDPGSSANLLQMSAFKQMGFPLPALE 246
Query: 169 PFEQPLIGFSGIVTYS---------DGSLLTD--FLVVKATSPYNAILGRQWIHKMRV 215
+ L+GF+G+ T S DG ++ + F +V+ S +NAI+GR W+H M++
Sbjct: 247 NLRRILLGFNGVSTTSLADVVLPVQDGPVILNIQFFMVEDLSLFNAIMGRTWLHDMKL 304
>gi|356502140|ref|XP_003519879.1| PREDICTED: uncharacterized protein LOC100786989 [Glycine max]
Length = 2002
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 104 DVQSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVRRILIDNGSSVNILDDATV 157
DVQSEV+ + + L + P H L I K+ N + ++LID G++VN++ + +
Sbjct: 884 DVQSEVTEIEKQLAYFEKPDFQMKSHLKPLFIRAKVENIGINKVLIDGGAAVNLMPRSML 943
Query: 158 EKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILG 206
K+ + L + G YS G++ D FLV+++ + +N +LG
Sbjct: 944 YKIGKHDTDLSAHNIVLSNYEGKTGYSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLG 1003
Query: 207 RQWIHKMRVVPSTYHQVLCYQTIYGI-EEIGGDQATTRTCASN 248
R+WIH + VPST HQ L GI E I DQ+ ++ N
Sbjct: 1004 REWIHGVGAVPSTLHQKLIIWREDGIVENIEADQSFYKSEVDN 1046
>gi|147777320|emb|CAN75943.1| hypothetical protein VITISV_016460 [Vitis vinifera]
Length = 499
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 32/249 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 254 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 308
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
P+ ++N I P E ++R + I ++ + E P D
Sbjct: 309 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRE----RINSIRPGLTGEGP-RPIDG 363
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
+I P+ S+ I + + R + S + D+T + D I P
Sbjct: 364 TIIFPPYKHQ---SLAIWDTVSRVSKTPDESYL----DSTDHQQHPLGDIILPVR----- 411
Query: 177 FSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIG 236
+G VT L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++
Sbjct: 412 -AGPVT-----LNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQTDLY 465
Query: 237 GDQATTRTC 245
G Q R C
Sbjct: 466 GSQLAARQC 474
>gi|147846098|emb|CAN84157.1| hypothetical protein VITISV_024468 [Vitis vinifera]
Length = 276
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
V ++F P + + PH+D LV+++ I VR+IL+ + +L A LE
Sbjct: 150 VDGVITFPPINPNWVLQPHEDVLVLTLGISRFDVRKILMSAYKQMGLLSSA------LEN 203
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLLTD---FLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
+ L GF+G +D SL+T F +V+ P+NAI+GR W+H M+++P TYH
Sbjct: 204 PRWT-----LSGFNG----NDASLVTQNVQFSIVEDFFPFNAIMGRTWLHSMKLIPFTYH 254
Query: 222 QVLCYQTIYGIEEIGGDQATTR 243
Q++ Y T G + G+Q R
Sbjct: 255 QMVNYLTQDGHINLFGNQLVVR 276
>gi|147800185|emb|CAN73110.1| hypothetical protein VITISV_013435 [Vitis vinifera]
Length = 500
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
P+ ++N I P E ++R + I ++ + E P D
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIRE----RINSIRPGLTGEGP-RPIDG 375
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
+I P L +I + NGSS L D I P
Sbjct: 376 TIIFPPSLAGLENPGRILSGF-------NGSSTTSLGDI-----------ILPVR----- 412
Query: 177 FSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIG 236
+G VT L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++
Sbjct: 413 -AGPVT-----LNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQTDLY 466
Query: 237 GDQATTRTC 245
G Q R C
Sbjct: 467 GSQLAARQC 475
>gi|147865149|emb|CAN84123.1| hypothetical protein VITISV_005636 [Vitis vinifera]
Length = 505
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 54/257 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH D H T CR+L+ +E LI G LK + + K P+ + P
Sbjct: 266 CXFHKDHGHTTETCRSLQYLVERLIKAGHLKHIITL--KAPR-------------APVAP 310
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ ++N I P E ++R + I ++ + E P D +I
Sbjct: 311 KAVINYINGGPSDEEYDSRRKRQKLLRAASIRE----RINSIRPGLTGEGP-RPIDGTII 365
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
P GSS +++ + + M ++ + L GF+G
Sbjct: 366 FPP----------------------PGSSADLVQASVIGHMGHSLAGLENPGRILSGFNG 403
Query: 180 IVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T
Sbjct: 404 SSTTSLGDIILPVXAGPVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLT 463
Query: 229 IYGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 464 BEGQTDLYGSQLAARQC 480
>gi|147856035|emb|CAN78618.1| hypothetical protein VITISV_003661 [Vitis vinifera]
Length = 506
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H CR L+ +E LI G LK++++ + N + + + P
Sbjct: 250 CAFHKEHGHTIETCRCLQNLVERLIKAGHLKQYLRSDTGGRDTSQN--RNSGAPRTPATP 307
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + + + F P D
Sbjct: 308 KAVINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIRPGLTGGGPRPIDGTIIFPPVD 367
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
L PH DAL++S++IG+ VRRIL+D SS +++ + V M ++ + L
Sbjct: 368 LTRTLQPHRDALILSLEIGDFDVRRILVDPSSSTDLVQASVVSHMGHSLTGLENPGRILS 427
Query: 176 GFSGIVTYSDGSLL-----------TDFLVVKATSPYN 202
GF+G T S G ++ F VV+ SP+N
Sbjct: 428 GFNGSSTTSLGDIVLPVQAGPVTLNVQFSVVQDLSPFN 465
>gi|147771539|emb|CAN62506.1| hypothetical protein VITISV_010654 [Vitis vinifera]
Length = 458
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 131 IKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL- 189
I G+ V RIL+D G+S +++ + V M ++ + L GF+G T S G ++
Sbjct: 314 INGGDFDVWRILVDPGNSADLVQASVVSHMGHNLAGLENPGRILSGFNGSSTTSLGDIVL 373
Query: 190 ----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q
Sbjct: 374 PVQAGPVTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQ 433
Query: 240 ATTRTC 245
R C
Sbjct: 434 LAARQC 439
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNN 46
CAFH + H T CR L +E+LI G LK++++++ + PQN+N+
Sbjct: 250 CAFHKEHGHTTETCRCLHFLVEKLIKTGHLKQYLRLDVGGREVPQNRNS 298
>gi|13486715|dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1579
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 115/297 (38%), Gaps = 62/297 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G +D +PQ F ++ I+ TS
Sbjct: 326 CAFHGRSSHTTEQCRNIRQ-------RGN------AQDPRPQKGTTFEASREAIQEQTSP 372
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ------------- 106
EQ + +R V + P + SK+ K+ ++
Sbjct: 373 AEQCQDV-------------QRRVIQVITRADPPSQLSKRQKKMQIRMVHSITSVGEGAP 419
Query: 107 ----SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
+SF P+D ++ PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 420 QYLNQLISFGPEDAGVM-FPHQDLLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGL 478
Query: 163 EQDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGR 207
+ P L GF G ++ + G + F V+ YNAI GR
Sbjct: 479 STQALTPAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVIDIPYNYNAIFGR 538
Query: 208 QWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRNQP 264
++K+ + + L G+ + G Q + A + NR + S +P
Sbjct: 539 ASLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPS--AAAKGDLAIINRAVHSVETEP 593
>gi|147775223|emb|CAN61598.1| hypothetical protein VITISV_013024 [Vitis vinifera]
Length = 510
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 113/269 (42%), Gaps = 47/269 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
CAFH + H T CR + +E LI G LK++++ + + +Q+N ++ +
Sbjct: 240 CAFHKNHGHTTETCRAFQFLVERLIKVGHLKQYLRTDTGGRDVSQHNNPGAPRVP---AA 296
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFL 112
P+ ++N I P E ++R + I E + L + + F
Sbjct: 297 PKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTIIFP 354
Query: 113 PQD-----LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
P D + PH LV C I+ G S+ L++ R+
Sbjct: 355 PVDPTRNTTTTSRRPH---LVPGNWGLRCAAYLIVGHMGHSLAGLENPX----RI----- 402
Query: 168 KPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVV 216
L GF+G T S G ++ FLVV+ SP+N ILGR W+H M+ +
Sbjct: 403 ------LSGFNGSSTTSLGDIILPVQAGPVTLNVQFLVVQELSPFNVILGRTWLHYMKAI 456
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
PSTYHQ++ + T G ++ G Q R C
Sbjct: 457 PSTYHQMVSFLTNDGQIDLYGSQLAARQC 485
>gi|13161535|emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
Length = 1455
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
PHDD ++I I V R+LID GSSV+++ T + L+ ++I P PL+GF G
Sbjct: 483 PHDDPIIIQATIHGAKVSRVLIDTGSSVDVMFLPTFLALGLKIEQIVPETTPLVGFDGST 542
Query: 182 TYSDGS--LLTD-------------FLVVKATS-PYNAILGRQWIHKMRVVPSTYHQVLC 225
+ + GS LL F ++ A + YN I GR + VPS H +
Sbjct: 543 SETLGSIPLLMSWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVK 602
Query: 226 YQTIYGIEEIGGDQATTRTCASNGMG 251
+ GI E+ G+QA R C N M
Sbjct: 603 FPANNGIGEVKGNQARARECRLNTMA 628
>gi|147859417|emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]
Length = 395
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 37/152 (24%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D + P+ DAL++++ I + +RRIL N +
Sbjct: 245 IDGAIVFSPIDHTRVLQPYRDALILTLGIRDFAIRRIL--NPRRI--------------- 287
Query: 165 DKIKPFEQPLIGFSGIVTYSDGS-----------LLTDFLVVKATSPYNAILGRQWIHKM 213
L GF+G+ T S G L F +V+ SP+NAILGR W+H M
Sbjct: 288 ---------LSGFNGVSTTSLGDITLPIQARPVILNAQFFIVEYLSPFNAILGRTWLHNM 338
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+V+PS YHQ++ + T G ++ G Q R C
Sbjct: 339 KVIPSIYHQMVSFITQDGQIDLYGSQLKARQC 370
>gi|147859576|emb|CAN79252.1| hypothetical protein VITISV_038224 [Vitis vinifera]
Length = 479
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH + H T CR L +E+LI G LK++++ + ++ +N + +
Sbjct: 241 CAFHKEHGHTTETCRCLHFLVEKLIKAGHLKQYLRSDAGGREVSQHHN----PGAPRAPA 296
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
P+ ++N I E + +K + +++ + A + + S P D +
Sbjct: 297 TPKAVINYINGGPSDEEYDSKRK----RQKLLRAASTRERINSIRPGLTGGSPRPIDGTI 352
Query: 119 IQSPHDDALVISIKIGNCLVRRILID-NGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
I P +I ++ RIL NGSS L D + P +
Sbjct: 353 IFPPPHGTHLIGLENPG----RILSGFNGSSTTSLGDIVL-----------PVQ------ 391
Query: 178 SGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGG 237
+G VT L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G
Sbjct: 392 AGPVT-----LNVQFSVVQDLSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNNGQIDLYG 446
Query: 238 DQATTRTC 245
Q R C
Sbjct: 447 SQLAARQC 454
>gi|147766514|emb|CAN65401.1| hypothetical protein VITISV_005675 [Vitis vinifera]
Length = 463
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E+LI G LK++++ + ++ + +
Sbjct: 256 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTERKITSQH---HNPGAPRAPAA 312
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ V TI+ L +ER I + + + F P D
Sbjct: 313 PKAVITILTGKLLRAASIRER--------INSIRPGLTGGGPRPIDGTIIFPPIDPTRTL 364
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
H DAL++S++IG+ V+RIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 365 QLHRDALILSLEIGDFDVQRILVDPGSSADLVQASVVSHMGHSLAGLENPGRILSGFNGS 424
Query: 181 VTYSDGSLL-----------TDFLVVKATSPYNAILGR 207
T S G ++ F VV+ SP+N ILGR
Sbjct: 425 STTSLGDIVLPVQAGPVTLNVQFSVVQELSPFNIILGR 462
>gi|147782535|emb|CAN61917.1| hypothetical protein VITISV_027490 [Vitis vinifera]
Length = 475
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL-------- 189
++RIL+D GSS +++ + + M ++ + L GF+G T S G ++
Sbjct: 332 LQRILVDPGSSADLVQASVIGHMGHSLAGLENPGRILSGFNGSSTTSLGDIILPVQAGPV 391
Query: 190 ---TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F VV+ S +N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q TR C
Sbjct: 392 TLNVQFSVVQELSSFNVILGRTWLHYMKAIPSTYHQMVSFLTDEGQTDLYGSQLATRQC 450
>gi|147801383|emb|CAN68057.1| hypothetical protein VITISV_020837 [Vitis vinifera]
Length = 504
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR L +E LI G LK+++ + +N + + P
Sbjct: 266 CAFHKEHGHTTETCRCLHYLVERLIKAGHLKQYLCSDAGGKDASHN--HNTEALKAPPAP 323
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ ++N I P E ++R + + I + K + F P D
Sbjct: 324 KAVINYINGGPSDEEYDSKRKRQKLLRAASVRERINSIRPGLTKGGPRPTDGTIIFPPVD 383
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH DAL++S+KIG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 384 PTRTLQPHRDALILSLKIGDFDVRRILVDPGSSADLVQTSVVSHMGHSLTGLENPGRILS 443
Query: 176 GFSGIVTYSDGSLL 189
GF+G T S G+++
Sbjct: 444 GFNGSSTTSLGNII 457
>gi|147787541|emb|CAN66599.1| hypothetical protein VITISV_039272 [Vitis vinifera]
Length = 441
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEF----VKVEDKQPQNQNNFLKKDQIENS 56
C +H + H T CR+L ++E LI G LK++ V+V D +N N+ K
Sbjct: 193 CVYHKEHGHTTEACRSLHYFVERLIKAGHLKQYLLSNVRVRDTS-RNHNSGTSK-----I 246
Query: 57 TSEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSF 111
+ P+ +N I PL E ++R + + + + + + + F
Sbjct: 247 PAAPKAAINYIHGGPLDEEYDSRRKRQRLLQAASVRERVNSIRPGIAGEGPRPIDGTIVF 306
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P + I PH DAL++S+++G+ VRRIL+D GSS ++L + + M + ++
Sbjct: 307 PPVNPTRILQPHLDALILSLEMGDFNVRRILVDLGSSADLLQASIIGHMGRDLSGLENPG 366
Query: 172 QPLIGFSGIVTYSDGSLL 189
+ L GF+G T S G ++
Sbjct: 367 RILSGFNGASTTSLGDIV 384
>gi|147825145|emb|CAN73243.1| hypothetical protein VITISV_005388 [Vitis vinifera]
Length = 484
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 140 RILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL---------- 189
RIL+D GSS +++ + V +M ++ E+ L GF+G T S G ++
Sbjct: 301 RILVDLGSSADLVQASVVGRMGHSLTSLENPERILSGFNGSSTTSLGDVILTVQVGPVTL 360
Query: 190 -TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F VV+ SP+N ILG W+H M+ +PSTYHQ++ + T G + G Q R C
Sbjct: 361 NVQFSVVQDLSPFNVILGCTWLHYMKAIPSTYHQMVSFLTKDGQVNLYGSQLAVRQC 417
>gi|116309170|emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]
Length = 1348
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G V+D +PQ ++ ++ T+
Sbjct: 642 CAFHGRSSHTTEQCRNIRQ-------RG------NVQDPRPQQGTTVEAPREAVQEQTTP 688
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+Q +T + R V+ E ++ V +SF P+D + +
Sbjct: 689 AKQRQDT------QRRRKMQIRMVHSITSAGEGAPQY--------VNQLISFGPEDAEGV 734
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + P L GFSG
Sbjct: 735 LFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPTQALTPALTSLRGFSG 794
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAI GR ++K+ + ++H L
Sbjct: 795 EAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATLNKLEAI--SHHNYL 852
>gi|147772419|emb|CAN69538.1| hypothetical protein VITISV_021002 [Vitis vinifera]
Length = 495
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDVSQHHNS-----EAPRAP 320
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E ++R + I E + L + +
Sbjct: 321 VAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + + M ++
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHMGHSLAGLENP 438
Query: 171 EQPLIGFSGIVTYSDGSLLTDFLVVKA 197
+ L GF+G T S G ++ L V+A
Sbjct: 439 GRILSGFNGSSTTSLGDII---LPVRA 462
>gi|77556346|gb|ABA99142.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 95/241 (39%), Gaps = 29/241 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR + + S+ Q V+ + Q Q +Q +++
Sbjct: 453 CAFHGRSSHTTEQCRNISQCGNAQDSRPQQGATVEAPREAVQEQAPL--AEQRQDAQRRV 510
Query: 61 EQIVNTIMAPLPLEVHMTKE--RNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
Q++ P L K R V+ E ++ + +SF P+D K
Sbjct: 511 IQVITRADLPTQLSKRQKKMQIRTVHSITSAGEGAPQY--------LNQLISFGPEDAKG 562
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH D LVIS +I VRRIL+D GSS +++ KM + P L GF
Sbjct: 563 VMLPHQDPLVISTEIAGFEVRRILVDGGSSADVIFAEAYAKMGFPTQALTPAPASLCGFG 622
Query: 179 G-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
G ++ + G + F VV YN I GR ++K + ++H
Sbjct: 623 GEAVQVLGQALSMIAFGSGENRREEQVLFDVVDIPYNYNGIFGRATLNKFEAI--SHHNY 680
Query: 224 L 224
L
Sbjct: 681 L 681
>gi|147862160|emb|CAN82601.1| hypothetical protein VITISV_038468 [Vitis vinifera]
Length = 522
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRPPVA--- 322
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
P+ ++N I P E +R + I E + L + +
Sbjct: 323 --PKAVINYINGGPSDEEYDSRPKRQKLLRAASIR--ERINSIRPGLTGEGPRPIDGTII 378
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D GSS +++ + V MR +
Sbjct: 379 FPPVDPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMR---HSLAGL 435
Query: 171 EQPLIGFSGIVTYSDGSLLTDFLVVKA 197
E P SG S SL L V+A
Sbjct: 436 ENPGRILSGFNRSSTTSLGDIILPVRA 462
>gi|32480326|emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]
Length = 992
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 120/304 (39%), Gaps = 67/304 (22%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR +++ +G +D +PQ + + E
Sbjct: 35 CAFHGHSSHTTEQCRNIRQ-------RG------NAQDPRPQ-----------QGTIVEA 70
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ-------------- 106
+ AP P E +R V + P + SK+ K+ ++
Sbjct: 71 SREAIQEQAP-PAEQRQDVQRRVIQVITRADPPSQLSKRQKKMQIRMVHSITSAGEGVPQ 129
Query: 107 ---SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 130 YQNQLISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLP 189
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ P L GF G ++ + G + F +V YNAI GR
Sbjct: 190 TQALTPAPASLRGFGGEAVQVLGQAFLLIAFGSGENKREEQILFDIVDIPYHYNAIFGRA 249
Query: 209 WIHKMRVVPSTYHQVLCYQTI--YGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQP- 264
++K + ++H L + + G+ + G Q + AS G + NR + S +P
Sbjct: 250 TLNKFEAI--SHHNYLKLKMLGPTGVIVVKGLQP---SAASKGDLAIINRVVHSVETEPH 304
Query: 265 -WKK 267
W K
Sbjct: 305 EWPK 308
>gi|147809940|emb|CAN67100.1| hypothetical protein VITISV_016811 [Vitis vinifera]
Length = 506
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 55/274 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H + H T CR L +E LI G LK+++ + K N + + + P
Sbjct: 255 CVYHKEXGHTTEVCRCLHYLVERLIRAGHLKQYLCSDAKGRDTSRN--HNSETLRAPAAP 312
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCKKREI---------------EAPEEFSKKCVKLD 104
+ I+N I P E ++R + + +P +
Sbjct: 313 KAIINHIDGGPFDEEYDSKRKRQRLLRAXSVSERVNSIQPVITGGGRSPHTWDNHFPTSR 372
Query: 105 VQSEVS-------FLPQDLKLIQSPHDDALVISIKIGNCLV-----RRILID-NGSSVNI 151
++++ +P+D +L + H +++ +G+ L RRIL NG+S
Sbjct: 373 PHTDIAAAPRHPHLVPRDRRLRRETHPTSVIS--HMGHSLTGLENPRRILSGFNGASTTS 430
Query: 152 LDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIH 211
L D + P + +G VT L F VV+ P+N ILGR W+H
Sbjct: 431 LGDIVL-----------PVQ------AGPVT-----LNVQFSVVQDLLPFNVILGRTWLH 468
Query: 212 KMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
M+V+PSTYHQ++ + T G ++ Q R C
Sbjct: 469 YMKVIPSTYHQMVSFLTKDGQIDLYDSQLAARQC 502
>gi|224100349|ref|XP_002311842.1| predicted protein [Populus trichocarpa]
gi|222851662|gb|EEE89209.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
+K ++ P++DALVISI + V +ILID+ + VNIL + KM + ++ PLI
Sbjct: 97 IKGVRHPYEDALVISIVMKGHRVYKILIDDSNLVNILLAEAMTKMGMNASRMTLVPTPLI 156
Query: 176 GFSGIVTYSDGS---------------LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
G G G+ L F+V+ PYNAI+ R +H++ VV ST
Sbjct: 157 GIEGSAVPMKGAVGLTITIGTAPHYVTLQQTFMVIDTHLPYNAIIRRPLLHQISVVVSTK 216
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTCASN 248
+ + + T+ + + G+Q +R CA+
Sbjct: 217 YLTMKFPTVKVVVVVKGNQEASRECANT 244
>gi|147807393|emb|CAN66195.1| hypothetical protein VITISV_005139 [Vitis vinifera]
Length = 506
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 98/256 (38%), Gaps = 51/256 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T CR+L +E+LI G LK+ +L+ D TS+
Sbjct: 266 CVFHKEHGHTTETCRSLXYLVEKLIKAGHLKQ--------------YLRSDTXXKXTSQH 311
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
P V R + E P + + F P D
Sbjct: 312 HNPXAPRAPAAPKAVINYINRG----PSDEEGPHP---------IDGTIIFPPVD----- 353
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
P + S R L+ SS +++ + V M ++ + L GF+G
Sbjct: 354 -PTRNTTATS-------RRPHLVPGSSSADLVQASVVSHMGHNLAGLENLGRILSGFNGS 405
Query: 181 VTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTI 229
T S G ++ F VV+ SP+N ILGR W+H M+ +PSTYHQ + + T
Sbjct: 406 STTSLGDIVMSVQAGPVTLNIQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQKVSFLTN 465
Query: 230 YGIEEIGGDQATTRTC 245
G ++ G Q R C
Sbjct: 466 EGQIDLYGSQLAARQC 481
>gi|147779182|emb|CAN69921.1| hypothetical protein VITISV_040638 [Vitis vinifera]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + + +
Sbjct: 233 CAFHKDHGHTTETCRSLQYLVERLIKVGHLKQYIRSDTGGRDVSQHHNSGAPRALVAS-- 290
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD------VQSEVS 110
+ ++N I P E ++R + I E + L + +
Sbjct: 291 ---KAVINYINGGPSDEEYDSRRKRQKLLRAASIS--ERINSIQPGLTGEGPRPIDGTII 345
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P DL PH DAL++S++IG+ VRRIL+D GSS +++ + + M +
Sbjct: 346 FPPVDLTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVIGHM---GHSLAGL 402
Query: 171 EQP---LIGFSGIVTYSDGSLL 189
E P L GF+G T S G ++
Sbjct: 403 ENPGXILSGFNGSSTTSLGDII 424
>gi|147794995|emb|CAN76325.1| hypothetical protein VITISV_011886 [Vitis vinifera]
Length = 460
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR+L+ +E LI G LK++++ + ++ + + P
Sbjct: 244 CAFHKEHGHTTETCRSLQYLVERLIKAGHLKKYLRSDTGGRDASQHY--HSGAPKAPTAP 301
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ ++N I E E P + + F P +
Sbjct: 302 KAVINYING---------------GPSDEEEGPRP---------IDGTIIFPPVNPTRTL 337
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D GSS +++ + V+ M ++ + L GF+G
Sbjct: 338 QPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVDHMGHSLAGLENPGRILSGFNGS 397
Query: 181 VTYSDGSLL 189
T S G ++
Sbjct: 398 STTSLGDII 406
>gi|38343986|emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa Japonica Group]
Length = 2074
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G V+D +PQ ++ ++ T+
Sbjct: 1368 CAFHGRSSHTTEQCRNIRQ-------RG------NVQDPRPQQGTTVEAPREAVQEQTTP 1414
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+Q +T + R V+ E ++ V +SF P+D + +
Sbjct: 1415 AKQRQDT------QRRRKMQIRMVHSITSAGEGAPQY--------VNQLISFGPEDAEGV 1460
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + P L GFSG
Sbjct: 1461 LFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPTQALTPALTSLRGFSG 1520
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAI GR ++K+ + ++H L
Sbjct: 1521 EAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATLNKLEAI--SHHNYL 1578
>gi|147801251|emb|CAN77115.1| hypothetical protein VITISV_016045 [Vitis vinifera]
Length = 480
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH + H T +CR L +E LI G LK++ + + QN N +
Sbjct: 241 CAFHKEHGHITEECRCLHYLVERLIRAGHLKQYFRSDTGGRDASQNHNT-----GAPKAL 295
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ P+ ++N I E + +K + +++ + A + + F P D
Sbjct: 296 AAPKAVINYINGGPSDEEYDSKRK----RQKLLRA--------ASVXEHGTIIFPPVDPT 343
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
I PH D L++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF
Sbjct: 344 RILXPHCDXLIMSLEIGDFDVRRILVDXGSSADLVQASVVSHMGYNLTGLENPRRILSGF 403
Query: 178 SGIVTYSDGSLL-----------TDFLVVKATSPYN 202
+G T S G ++ F VV+ SP+N
Sbjct: 404 NGSSTTSLGDIILPVQAHPVTLNVQFSVVQDLSPFN 439
>gi|356565827|ref|XP_003551138.1| PREDICTED: uncharacterized protein LOC100815866 [Glycine max]
Length = 1303
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H+ AL +S++ + +V ++LIDNGSS+N++ T+EK+ ++KP + F G
Sbjct: 384 HNKALHVSVRCMDHVVAKVLIDNGSSLNVMPKTTLEKLPFSVSRLKPSSMVVRAFDGTRR 443
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
G + F V+ Y+ +LGR WIH + VVPST HQ L +
Sbjct: 444 EVMGEIDIPIQIGPHTCNVVFQVMDINPAYSCLLGRPWIHALGVVPSTLHQKLKFAVGGL 503
Query: 232 IEEIGGDQATTRTCASNG 249
+ + G++ +C S+
Sbjct: 504 LVIVSGEEDILVSCPSSA 521
>gi|147835075|emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera]
Length = 484
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T C++L +E+LI G LK++++ + + N + P
Sbjct: 266 CAYHKEHGHTTETCKSLHYLVEKLIRAGHLKQYLRSDARVRDTSRN--HNSGTSRIPAAP 323
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK----LDVQSEVSFLPQD 115
+ ++N I PL E ++R + + + + + + F P D
Sbjct: 324 KAVINYIHRRPLDEEYDSKRKRQRLLRAASVRERVNSIRPGIASGGPRPIDGTIIFPPID 383
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
K I PH DAL++S+++G+ VRRIL+D GSS ++L + + M
Sbjct: 384 PKRILQPHRDALILSLEMGDFDVRRILVDPGSSADLLQASVISHM 428
>gi|147765412|emb|CAN64902.1| hypothetical protein VITISV_037599 [Vitis vinifera]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK-QPQNQNNFLKKDQIENSTSE 59
CAFH D H T CR + +E LI G LK++++ + + + +Q+N L ++ +
Sbjct: 229 CAFHKDHGHTTETCRAFQFLVERLIKTGHLKQYLRTDTRGRDVSQHNNLGAPRVPVA--- 285
Query: 60 PEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFLPQ 114
P+ ++N I P E ++R + I + + + + + F P
Sbjct: 286 PKAVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPV 345
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
D PH DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 346 DPTRTLQPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHM 391
>gi|115453711|ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
gi|113548927|dbj|BAF12370.1| Os03g0439900, partial [Oryza sativa Japonica Group]
Length = 420
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 25/239 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T C+ +++ ++ Q ++ + Q Q +E
Sbjct: 64 CAFHGRSSHTTEQCQNIRQRGNAQDTRSQQGTTIEAPREAAQEQT-----PPVEQRQDAQ 118
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ I P +++ ++ R + + K+ + V +SF P+D + +
Sbjct: 119 RRVIQVITRADPPGQLSKRQKKMHI--RAVHSITSAGKRAPQY-VNQLISFGPEDAEGVM 175
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG- 179
PH D LVIS +I V RIL+D GSS +++ KM L + P + GF G
Sbjct: 176 FPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGE 235
Query: 180 ----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAILGR ++K + ++H L
Sbjct: 236 AVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAI--SHHNYL 292
>gi|147864002|emb|CAN78804.1| hypothetical protein VITISV_002368 [Vitis vinifera]
Length = 325
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 146 GSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAIL 205
GSSV++L +KM ++ Q L GF+ T S G +F VV+ SP+NAI+
Sbjct: 202 GSSVDLLQMFAFKKMGFPPSTLENPRQILPGFNRASTTSLG----NFSVVEDLSPFNAIM 257
Query: 206 GRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRN 262
G W+H M+ +PS YH+++ Y T+ G + G Q TR + RE GST N
Sbjct: 258 GCTWLHGMKAIPSMYHKMVSYLTLDGHINLYGSQLATRQ-----FYQVAREAGSTSN 309
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CA+H D H T C+ L +E+L+ G LK +V++E F KK ST E
Sbjct: 165 CAYHKDHGHTTEQCKNLHYLVEKLVRLGHLKHYVRLEGSSVDLLQMFAFKKMGFPPSTLE 224
Query: 60 -PEQIV 64
P QI+
Sbjct: 225 NPRQIL 230
>gi|13940598|gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G ++ +PQ ++ ++ T
Sbjct: 326 CAFHGRSSHTTEQCRNIRQ-------RG------NAQNPRPQQGTTVEAPREAVQEQTPP 372
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
EQ + VH +R + R + + + + + +SF P+D + +
Sbjct: 373 AEQRQD---------VHQLSKRQKKMQTRMVHSITSAGEGAPQY-LNQLISFGPEDAEGV 422
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + P L GF G
Sbjct: 423 IFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPVSLRGFGG 482
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAI GR ++K + ++H L
Sbjct: 483 EAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI--SHHNYL 540
>gi|108709044|gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 406
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 25/239 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T C+ +++ ++ Q ++ + Q Q +E
Sbjct: 50 CAFHGRSSHTTEQCQNIRQRGNAQDTRSQQGTTIEAPREAAQEQT-----PPVEQRQDAQ 104
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ I P +++ ++ R + + K+ + V +SF P+D + +
Sbjct: 105 RRVIQVITRADPPGQLSKRQKKMHI--RAVHSITSAGKRAPQY-VNQLISFGPEDAEGVM 161
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG- 179
PH D LVIS +I V RIL+D GSS +++ KM L + P + GF G
Sbjct: 162 FPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGE 221
Query: 180 ----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAILGR ++K + ++H L
Sbjct: 222 AVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAI--SHHNYL 278
>gi|358345054|ref|XP_003636599.1| hypothetical protein MTR_047s0025 [Medicago truncatula]
gi|355502534|gb|AES83737.1| hypothetical protein MTR_047s0025 [Medicago truncatula]
Length = 346
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I KI V ++L+D G++VN+L + + K+ L +KP L + G
Sbjct: 208 HLKPLFIQAKINGVGVNKVLVDGGATVNLLPQSFLGKIGLYDSDLKPHNVILTNYEGTSG 267
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
S G++ +T F+VV + + +N LGR+WIH + VPST HQ + G
Sbjct: 268 NSLGAIELELVVGSTRRITTFMVVPSKANFNVRLGREWIHGVGAVPSTVHQRIAIWKEDG 327
Query: 232 -IEEIGGDQA 240
+E + DQ+
Sbjct: 328 LVENVEADQS 337
>gi|147835299|emb|CAN67790.1| hypothetical protein VITISV_041882 [Vitis vinifera]
Length = 387
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 128 VISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGS 187
V S +I + VRRIL+D SS ++L + +++M ++ L GF+G T S G+
Sbjct: 240 VDSNRIFDFDVRRILVDPSSSTDLLQVSVIKQMGFSPSNMEKPGWILSGFNGASTTSLGN 299
Query: 188 LL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
++ F +V+ SP+NAILG +H M+V+PSTYHQ++ Y T
Sbjct: 300 IVLPVQADPVTLNVQFSIVEDLSPFNAILGSTLLHGMKVIPSTYHQMVSYLT 351
>gi|147798506|emb|CAN74391.1| hypothetical protein VITISV_042652 [Vitis vinifera]
Length = 517
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP---LIGFSGIVTYSDGSLL------ 189
RRIL+D S +++ + + M + E P L GF+G T S G ++
Sbjct: 372 RRILVDPSISADLVQASVIGHM---GHSLTCLENPGRILSGFNGSSTTSLGDIVLPVQAG 428
Query: 190 -----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRT 244
F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q R
Sbjct: 429 PITLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGSQLAARQ 488
Query: 245 C 245
C
Sbjct: 489 C 489
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK 35
C FH + H T CR+L+ +E+LI G LK++++
Sbjct: 296 CVFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLR 330
>gi|356561598|ref|XP_003549068.1| PREDICTED: uncharacterized protein LOC100789798 [Glycine max]
Length = 2277
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 902 HLKPLFIRAKVENIGINKVLIDGGAAVNLMPRSMLHKIGKHDTDLSAHNIVLSNYEGKTG 961
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 962 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1021
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1022 IVENIEADQSFYKSEVDN 1039
>gi|356503011|ref|XP_003520306.1| PREDICTED: uncharacterized protein LOC100807511 [Glycine max]
Length = 736
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +++ + H+ AL + ++ + +V +++IDNGSS+N++ T+EK+ ++K
Sbjct: 453 IAFAEEEIPVEGRGHNKALHVLVRCMDHVVAKVIIDNGSSLNVMPKTTLEKLPFSVSRLK 512
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVP 217
P + F G G + F V+ Y+ +LGR WIH + VVP
Sbjct: 513 PSSMVVRAFDGAQREVMGEIDIPIQIGPHTCNVVFQVMDINPAYSCLLGRPWIHALGVVP 572
Query: 218 STYHQVLCYQTIYGIEEIGGDQATTRTCASNG 249
ST HQ L + + + G++ +C S+
Sbjct: 573 STLHQKLKFAVGGLLVIVSGEEDMLVSCPSSA 604
>gi|356569582|ref|XP_003552978.1| PREDICTED: uncharacterized protein LOC100797050 [Glycine max]
Length = 2073
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 879 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPQSMLYKIGKHDTDLSAHNIVLSNYEGKTG 938
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 939 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 998
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 999 IVENIEADQSFYKSEVDN 1016
>gi|356507113|ref|XP_003522315.1| PREDICTED: uncharacterized protein LOC100818573 [Glycine max]
Length = 2203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENIGINKVLIDGGAAVNLMPRSMLHKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|31126674|gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 49/240 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G +D +PQ ++ ++ T
Sbjct: 594 CAFHGRSSHTTEQCRNIRQ-------RG------NAQDPRPQQGTTVEAPREAVQEQTPP 640
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
EQ +T +R + + A E + +L +SF P+D K +
Sbjct: 641 AEQRQDT-------------QRRIRMVRSITSAGEGAPQYVNQL-----ISFGPEDTKGV 682
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + L GF G
Sbjct: 683 LFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTLAPASLRGFGG 742
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G ++ F VV YNAI GR ++K + ++H L
Sbjct: 743 EAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKFEDI--SHHNYL 800
>gi|108709239|gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1908
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 49/240 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G +D +PQ ++ ++ T
Sbjct: 594 CAFHGRSSHTTEQCRNIRQ-------RG------NAQDPRPQQGTTVEAPREAVQEQTPP 640
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
EQ +T +R + + A E + +L +SF P+D K +
Sbjct: 641 AEQRQDT-------------QRRIRMVRSITSAGEGAPQYVNQL-----ISFGPEDTKGV 682
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + L GF G
Sbjct: 683 LFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTLAPASLRGFGG 742
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G ++ F VV YNAI GR ++K + ++H L
Sbjct: 743 EAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKFEDI--SHHNYL 800
>gi|356523519|ref|XP_003530385.1| PREDICTED: uncharacterized protein LOC100799804 [Glycine max]
Length = 2073
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 890 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 949
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 950 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1009
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1010 IVENIEADQSFYKSEVDN 1027
>gi|356574214|ref|XP_003555246.1| PREDICTED: uncharacterized protein LOC100788106 [Glycine max]
Length = 2203
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356554623|ref|XP_003545644.1| PREDICTED: uncharacterized protein LOC100789762 [Glycine max]
Length = 2243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 919 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 978
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 979 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1038
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1039 IVENIEADQSFYKSEVDN 1056
>gi|356553674|ref|XP_003545178.1| PREDICTED: uncharacterized protein LOC100783555 [Glycine max]
Length = 2312
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356494941|ref|XP_003516339.1| PREDICTED: uncharacterized protein LOC100810819 [Glycine max]
Length = 2238
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|8778245|gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H H+T CR+L + G++ + +ED + + K +Q+ N+ + P
Sbjct: 199 CELHKSYGHHTSRCRSLGARLAAKFLAGEISGGLTIEDLEAKKG----KTEQV-NTVANP 253
Query: 61 EQIVNTIMAPLPLEVHMTKERN------------------VYCK---------KREIEAP 93
EQ P +E + +C+ +R+ +A
Sbjct: 254 EQAAPAANPEGPKRGRGNREADDDEPEAARGRIFTILGDSAFCQDTAASIKAYQRKADAN 313
Query: 94 EEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILD 153
+++ + EV F D + PH+D LVI++ IG+ V ++L+D GS+++I+
Sbjct: 314 RNWARPFNGPN--DEVIFHESDTNGLDRPHNDPLVITLTIGDFNVEQVLVDTGSTLDIVF 371
Query: 154 DATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL 188
T+ +M+++ +I P +P++GFSG T + G++
Sbjct: 372 LTTLREMKIDMTQIMPTPRPVLGFSGETTMTLGTI 406
>gi|356562251|ref|XP_003549385.1| PREDICTED: uncharacterized protein LOC100784663 [Glycine max]
Length = 2160
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356551699|ref|XP_003544211.1| PREDICTED: uncharacterized protein LOC100802634 [Glycine max]
Length = 2201
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 899 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 958
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 959 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1018
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1019 IVENIEADQSFYKSEVDN 1036
>gi|147778920|emb|CAN69319.1| hypothetical protein VITISV_032662 [Vitis vinifera]
Length = 385
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D H T CR + +E LI G LK++++ + N + + + P
Sbjct: 128 CAFHKDHGHTTETCRAFQFLVERLIKAGHLKQYLRSD-----NGGRDASQHHNPGAPAAP 182
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSFLPQ 114
+ ++N I P + R R + E + L + + F P
Sbjct: 183 KAVINYINGG-PSDEEYDSRRKRQKLLRAVSIHERINSILPGLIGEGHRPIDGTIIFPPV 241
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
D P+ DAL++S++IG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 242 DPTRTLQPYRDALILSLEIGDFDVRRILVDPGSSADLVQASVVGHMGHSLTGLENPGRIL 301
Query: 175 IGFSGIVTYSDGSLL 189
F+G T S G ++
Sbjct: 302 SEFNGSSTTSLGDIV 316
>gi|356551735|ref|XP_003544229.1| PREDICTED: uncharacterized protein LOC100817039 [Glycine max]
Length = 2179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 910 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 969
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 970 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1029
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1030 IVENIEADQSFYKSEVDN 1047
>gi|356506259|ref|XP_003521904.1| PREDICTED: uncharacterized protein LOC100796526 [Glycine max]
Length = 2119
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 893 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 952
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 953 YSLGAIQVDVAVGSVVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1012
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1013 IVENIEADQSFYKSEVDN 1030
>gi|356540662|ref|XP_003538805.1| PREDICTED: uncharacterized protein LOC100806642 [Glycine max]
Length = 1995
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 851 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 910
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 911 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 970
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 971 IVENIEADQSFYKSEVDN 988
>gi|356503115|ref|XP_003520357.1| PREDICTED: uncharacterized protein LOC100809115 [Glycine max]
Length = 2203
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|224107098|ref|XP_002314375.1| predicted protein [Populus trichocarpa]
gi|222863415|gb|EEF00546.1| predicted protein [Populus trichocarpa]
Length = 1335
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF +DL L H+ L I + +V RIL+D+GS+VNIL T++++ + D+
Sbjct: 733 TEISFNDEDLLLGSKLHNRPLFIKGYVDQKMVNRILVDDGSAVNILPLKTMKELGIPMDE 792
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----LTD------FLVVKATSPYNAILGRQWIHKMRV 215
+ P + GF+ + G + + D F V+ A + YN +LGR W+H+ +
Sbjct: 793 LFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWMHENGI 852
Query: 216 VPSTYHQVLCY 226
+ ST HQ Y
Sbjct: 853 ISSTLHQCFKY 863
>gi|356557646|ref|XP_003547126.1| PREDICTED: uncharacterized protein LOC100799454 [Glycine max]
Length = 1921
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 652 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 711
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 712 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 771
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 772 IVENIEADQSFYKSEVDN 789
>gi|356503081|ref|XP_003520340.1| PREDICTED: uncharacterized protein LOC100788952 [Glycine max]
Length = 2160
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356573839|ref|XP_003555063.1| PREDICTED: uncharacterized protein LOC100787746 [Glycine max]
Length = 2219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 884 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKRDTDLSAHNIVLSNYEGKTG 943
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 944 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1003
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1004 IVENIEADQSFYKSEVDN 1021
>gi|356537315|ref|XP_003537174.1| PREDICTED: uncharacterized protein LOC100793719 [Glycine max]
Length = 2128
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356507082|ref|XP_003522300.1| PREDICTED: uncharacterized protein LOC100801149 [Glycine max]
Length = 2075
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVVVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356570574|ref|XP_003553460.1| PREDICTED: uncharacterized protein LOC100782050 [Glycine max]
Length = 2129
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356532475|ref|XP_003534798.1| PREDICTED: uncharacterized protein LOC100806767 [Glycine max]
Length = 2160
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|356529936|ref|XP_003533542.1| PREDICTED: uncharacterized protein LOC100788921 [Glycine max]
Length = 2189
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 919 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 978
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 979 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1038
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1039 IVENIEADQSFYKSEVDN 1056
>gi|108709069|gb|ABF96864.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 738
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAF H T CR +++ + + Q V+ + Q Q +Q +++
Sbjct: 491 CAFLRRSSHTTEQCRNIRQRVSGQDPRPQQGAAVEAPREAAQEQ---APPEQCQDAQRRV 547
Query: 61 EQIVNTIMAPLPLEVHMTKE--RNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
Q++ P+ L K R V+ E ++ + ++SF P D +
Sbjct: 548 IQVITRADPPIQLSKRQKKMQLRTVHNITLAGEGAPQY--------LNQQISFRPGDAEG 599
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH D LVIS +I VRRIL+D G+S +++ KM L + P L FS
Sbjct: 600 VMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLATQALTPAPASLRRFS 659
Query: 179 G--IVTYSDGSLLTDFL-------------VVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
G + L+ F VV YNAI GR ++K + ++H
Sbjct: 660 GEAVQVLGQAQLMVAFRTAENRREEQVLFDVVDIPYNYNAIFGRATLNKFEAI--SHHNY 717
Query: 224 L 224
L
Sbjct: 718 L 718
>gi|356570109|ref|XP_003553233.1| PREDICTED: uncharacterized protein LOC100808063 [Glycine max]
Length = 1626
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N V ++LID G++VN++ + + ++ + L + G
Sbjct: 500 HLKPLFIRAKVENVGVNKVLIDGGAAVNLMPRSMLYRIGKHDTDLSAHNIVLSNYEGKTG 559
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 560 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 619
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 620 IVENIEADQSFYKSEVDN 637
>gi|147845877|emb|CAN80080.1| hypothetical protein VITISV_002679 [Vitis vinifera]
Length = 503
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED---KQPQNQNNFLKKDQIENST 57
CAFH D H T CR+L+ +E LI G LK++++ + Q+ N+ + +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDXSQHHNSGAPRAPVAPKA 325
Query: 58 SEPEQIVNTIMAPLPLEVHMTKER-NVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ + L +ER N E P + + F P D
Sbjct: 326 EYDSRRKRQKL----LRAASIRERINSIXPGLTGEGPRP---------IDGTIIFPPVDP 372
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
PH DAL++S++IG+ VRRIL+D SS +++ + V +M ++ + L G
Sbjct: 373 TXTLQPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVGRMGHSLTGLENPGRILSG 432
Query: 177 FSGIVTYSDGSLL 189
F+G T S G ++
Sbjct: 433 FNGSSTTSLGDII 445
>gi|78708038|gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 45/249 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H CR +++ +G V+D +PQ + ++ TS
Sbjct: 307 CAFHGRSPHTIEQCRNIRQ-------RG------NVQDARPQQGATVEAPHEAVQEQTSP 353
Query: 60 PEQ-------IVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSK--KCVKLDVQSEVS 110
EQ ++ I P H++K + KK +I A + + V +S
Sbjct: 354 VEQRQDAQRRVIQVITRADP-PGHLSKRQ----KKMQIRAVHSITSAGEGAPQYVNQLIS 408
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P+D + + PH D LVIS +I VRRI +D GSS +++ KM L + P
Sbjct: 409 FGPEDAEGVMFPHQDPLVISAEIAGFEVRRIQVDGGSSADVIFAEAYAKMGLPTQALTPA 468
Query: 171 EQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRV 215
L GF ++ + G + F VV YNAILGR ++K
Sbjct: 469 PASLRGFGREAVQVLGQALLLIAFGSGESRREEQVLFDVVDIPYNYNAILGRATLNKFEA 528
Query: 216 VPSTYHQVL 224
+ ++H L
Sbjct: 529 I--SHHNYL 535
>gi|147814908|emb|CAN68066.1| hypothetical protein VITISV_035817 [Vitis vinifera]
Length = 511
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H + C++L +++JI G LK++++ + + N + P
Sbjct: 269 CAYHKEHGHTMKMCKSLHXLVDKJIRAGHLKQYLRSDARGRDASRN--HNSGTPRVLATP 326
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSK-------------KCVKLDVQS 107
+ I+N I PL+ +R K+R ++A + + L +
Sbjct: 327 KAIINYING-GPLDEEXDSKRX---KQRLLQATSVRERVNSIRPRITGEGGEGRPLLING 382
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+ F P D I PH BAL++S++IG+ VRRIL+D GSS++++ + + M +
Sbjct: 383 TIIFPPVDPTRILQPHRBALILSLEIGDFDVRRILVDPGSSIDLVQASVISHMGRNLTGL 442
Query: 168 KPFEQPLIGFSGIVTYSDGSLL 189
K + L GF+ T S G ++
Sbjct: 443 KNPGRILSGFNEXSTTSLGDIV 464
>gi|356514268|ref|XP_003525828.1| PREDICTED: uncharacterized protein LOC100776741 [Glycine max]
Length = 2128
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDEGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ ++ N
Sbjct: 1054 IVENIEADQSFYKSEVDN 1071
>gi|113205384|gb|ABI34371.1| Gag/pol polyprotein, 3'-partial, putative [Solanum demissum]
Length = 907
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +L + + H+ L I++K V R+LID GS NI +T++K+ + ++++
Sbjct: 308 ITFSDDELPVEGTGHNQGLHITVKCELSYVTRVLIDGGSGANICPLSTLQKLNVNVERVR 367
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P + F G T + G + +F V+ + YN +LGR W+H+ VP
Sbjct: 368 PNNVCVRAFDGTKTDAIGEIELILKIGHVDFTVNFQVLNINASYNLLLGRPWVHRAGAVP 427
Query: 218 STYHQVLCYQ 227
ST HQ++ ++
Sbjct: 428 STLHQMVKFE 437
>gi|147798270|emb|CAN76859.1| hypothetical protein VITISV_001665 [Vitis vinifera]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP---QNQNNFLKKDQIENST 57
CAFH + H T C+ L +E LI+ G L++++ + + QN N+ + +
Sbjct: 266 CAFHKEHGHTTESCKCLHDLVERLINAGHLRQYLCSDTRGRDTFQNHNSGAPR-----AP 320
Query: 58 SEPEQIVNTIM-APLPLEVHMTKERNVYCKKREIEAPEEFSKKCV----KLDVQSEVSFL 112
+ P+ ++N I P E ++R + F + + + + F
Sbjct: 321 AVPKAVINYINEGPSDEEYDSKRKRQKLLWVASLHERINFIRPGLTGGSPRPIDETIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P D PH DAL++ ++IG+ VRRIL+D GSS +++ + + M + + E
Sbjct: 381 PVDPTRTLQPHRDALILFLEIGDFDVRRILVDLGSSADLMQASVISHM---GNSLTGLEN 437
Query: 173 P---LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYN 202
P L GF+G+ T G ++ F VV+ SP+N
Sbjct: 438 PGRILSGFNGLSTTLLGDIVLPVQAGPVTLNVQFSVVQDLSPFN 481
>gi|356569818|ref|XP_003553092.1| PREDICTED: uncharacterized protein LOC100807161 [Glycine max]
Length = 2650
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 1266 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTD 1325
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 1326 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1385
Query: 232 I-EEIGGDQATTRT 244
I E I DQ+ ++
Sbjct: 1386 IVENIEADQSFYKS 1399
>gi|147840666|emb|CAN68549.1| hypothetical protein VITISV_037963 [Vitis vinifera]
Length = 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFV---KVEDKQPQNQNNFLKKDQIENST 57
CAF+ D H T CR L +E+LI G LK+++ E PQN+N+ + +
Sbjct: 228 CAFYKDHGHTTETCRCLHFLVEKLIKAGHLKQYLCSGAGERDVPQNRNSGAPR-----AP 282
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFL 112
+ P+ +++ I P E ++R + I + + + F
Sbjct: 283 TAPKAVISYINGGPSDEEYDSRRKRQKLLRAASTRERINSIRPGLTGGGPRPIDGTIIFP 342
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
P D PH DAL++S++IG+ VRRILID GSS +++ A+VE +
Sbjct: 343 PVDPTRTLQPHRDALILSLEIGDFDVRRILIDPGSSADLV-QASVETL 389
>gi|147780530|emb|CAN60330.1| hypothetical protein VITISV_015028 [Vitis vinifera]
Length = 711
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 62/227 (27%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFV----KVEDKQPQNQNNFLKKDQIENS 56
CA+H + H T C++L +E LI G LK+++ +V D PQN+++ + I
Sbjct: 203 CAYHKEHGHTTERCKSLHYLVERLIKAGHLKQYLHSKARVRDT-PQNRDSRTTRAPIA-- 259
Query: 57 TSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
P+ ++N I PL+ +R KR+ + ++ S ++ + +L
Sbjct: 260 ---PKAVINYIHGG-PLDEKYNSKR-----KRQ---------RLLRAASASVINHMGLEL 301
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
+++ +G L R NG++ L D +
Sbjct: 302 SGLEN-----------LGKILSRF----NGAATTSLGDIVLSVQ---------------- 330
Query: 177 FSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
+G VT L F VV+ SP+NAILGR W+H M+V+PSTYHQ+
Sbjct: 331 -AGPVT-----LNVQFSVVEDLSPFNAILGRMWLHYMKVIPSTYHQM 371
>gi|297721157|ref|NP_001172941.1| Os02g0455725 [Oryza sativa Japonica Group]
gi|255670866|dbj|BAH91670.1| Os02g0455725 [Oryza sativa Japonica Group]
Length = 752
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 44/213 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
CAFH H T CR +++ +G +D +PQ ++ ++ T
Sbjct: 328 CAFHGRSSHTTEQCRNIRQ-------RG------NAQDPRPQQGTTVEAPREAVQEQTP- 373
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ------------- 106
P E +R V + P + SK+ K+ ++
Sbjct: 374 ------------PAEQRQDVQRRVIQVITRADPPSQLSKRQKKMQIRMVHSITSAGEGAP 421
Query: 107 ----SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 422 QYLNQLISFRPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGL 481
Query: 163 EQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVV 195
+ P L GF G + D ++
Sbjct: 482 PTQALTPAPASLRGFGGEAVQPSAASKGDLAII 514
>gi|18568275|gb|AAL76007.1|AF466646_15 prpol [Zea mays]
Length = 1317
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIH 119
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKM 213
PL GF G + G + F +V PYNAI+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASN 248
+ + + + G I G Q R N
Sbjct: 180 EAILHPAYLCMKIPSDQGPIAIHGSQEAARRAEGN 214
>gi|356561548|ref|XP_003549043.1| PREDICTED: uncharacterized protein LOC100813354 [Glycine max]
Length = 2129
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 1053
Query: 232 I-EEIGGDQATTRTCASN 248
I E + DQ+ ++ N
Sbjct: 1054 IVENMEADQSFYKSEVDN 1071
>gi|224115960|ref|XP_002317171.1| predicted protein [Populus trichocarpa]
gi|222860236|gb|EEE97783.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF +DL L H+ L I + +V RIL+D+GS+VNIL T++++ + D+
Sbjct: 459 TEISFNDEDLLLGSKLHNRPLFIKGYVDEKIVNRILVDDGSAVNILPLKTMKELGIPMDE 518
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----LTD------FLVVKATSPYNAILGRQWIHKMRV 215
+ P + GF+ + G + + D F V+ A + YN +LGR WIH+ +
Sbjct: 519 LFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWIHENGI 578
Query: 216 VPSTYHQVLCY 226
+ ST +Q Y
Sbjct: 579 ISSTLYQCFKY 589
>gi|18092334|gb|AAL59226.1|AF448416_3 Cinful1 polyprotein [Zea mays]
Length = 376
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIH 119
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKM 213
PL GF G + G + F +V PYNAI+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMPITFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASN 248
+ + + + G I G Q R N
Sbjct: 180 EAILHPAYLCMKIPSDQGPIAIHGSQEAARRAEGN 214
>gi|356510705|ref|XP_003524076.1| PREDICTED: uncharacterized protein LOC100807907 [Glycine max]
Length = 2060
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G+++N++ + + K+ + L + G
Sbjct: 877 HLKPLFIRAKVENVGINKVLIDGGAAINLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 936
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 937 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLIIWREDG 996
Query: 232 I-EEIGGDQATTRTCASN 248
I E I DQ+ + N
Sbjct: 997 IVENIEADQSFYKLEVDN 1014
>gi|222635554|gb|EEE65686.1| hypothetical protein OsJ_21305 [Oryza sativa Japonica Group]
Length = 1397
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL L H+ L++ +I + RI++D+GS++N+L T++K+ + +
Sbjct: 1087 MTFTEEDLLLGNKKHNRPLLMYGEIDDLPTNRIMVDDGSAINLLPLRTLKKIGYSRRDLN 1146
Query: 169 PFEQPLIGF-----------SGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ GF S ++ S F ++ A + YNA+LGR W+H+ +VVP
Sbjct: 1147 RSNVVIHGFNQAGQEALGTISLVLKLEPLSTYVTFHIIDAATSYNALLGRPWLHENQVVP 1206
Query: 218 STYHQVLCYQTIYG-IEEIGGDQ 239
ST HQ + Y+ G I I D+
Sbjct: 1207 STLHQCIKYKDKSGEIMRIFADE 1229
>gi|147860822|emb|CAN78906.1| hypothetical protein VITISV_006738 [Vitis vinifera]
Length = 462
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH + H T CR L+ +E LI G LK++ + + N + + P
Sbjct: 256 CVFHKEHGHTTETCRCLQYLVERLIKVGHLKQYFRSDAGGRDASRN--HNSGAPRAPAVP 313
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREI-EAPEEFSKKCVKLD---VQSEVSFLPQD 115
+ +N I P E ++R + + E D + + F P D
Sbjct: 314 KAFINYINGDPSDEEYDSKRKRQKLLRAASVRERVNSIRPGITGRDPYPIDRTIIFPPAD 373
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
I PH DAL++S++IG+ VRRIL+D GSS N++ V M ++ + L
Sbjct: 374 PTRILQPHRDALILSLEIGDFDVRRILVDPGSSANLVQALVVSYMGHSLTGLENPRRILS 433
Query: 176 GFSGIVTYSDGSL 188
F+G DG +
Sbjct: 434 RFNGSFLTKDGQI 446
>gi|147776250|emb|CAN65279.1| hypothetical protein VITISV_035562 [Vitis vinifera]
Length = 513
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CAFH + H T CR+L+ +E+LI G LK++++ + + Q+ N +
Sbjct: 266 CAFHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKVTSQHHNPGAPRAPAAPRA 325
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
++V + P + R R E + L + + F
Sbjct: 326 PAAPKVVINYINGGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGGDPRPIDGTIIF 385
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
D P+ DAL++S++IG+ VRRIL+D GSS +++ + V M
Sbjct: 386 PLVDPTRTLQPYRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHM----------- 434
Query: 172 QPLIGFSGIVTYSDGSLLTDFLVVKATSPYNA---ILGRQWI----HKMRVVPSTYHQV 223
G S V + G +L+ F T P ++ ILG + + + +PSTYHQ+
Sbjct: 435 ----GHSLAVLENPGRILSGFNGSSTTWPSHSQRTILGGTRVITLQYHLGAIPSTYHQM 489
>gi|77556646|gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1767
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 27/240 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T C +++ + Q V+ + Q Q ++ Q
Sbjct: 583 CAFHGRSLHTTEQCLNIRQRGNAQDPRPQQGTTVEAPREAVQEQIPLAEQRQDTQ----- 637
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKK-REIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+++ I P + ++R + + I + E + + V +SF P+D + +
Sbjct: 638 RRVIQVITRADPPSLLSKRQRKMQIRMVHSITSAGEGAPQYVN----QLISFGPEDAEGV 693
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
PH D LVIS +I VRRIL+D GSS +++ KM L + P L GF G
Sbjct: 694 LFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQTLAPAPTSLRGFGG 753
Query: 180 -----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAI GR ++K + ++H L
Sbjct: 754 EAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI--SHHNYL 811
>gi|147792271|emb|CAN68042.1| hypothetical protein VITISV_039276 [Vitis vinifera]
Length = 513
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 134 GNCLVRRILID----NGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG--- 186
G R+I +D GSS ++L + ++M ++ L F+G T S G
Sbjct: 65 GQSRSRQIQLDEIGTKGSSTDLLQMSAYKQMGYSPSTLENLRCLLSEFNGATTTSLGDVX 124
Query: 187 --------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
+L F +V YNAI+GR W+HKM+V+P TYHQ++ Y T G + G+
Sbjct: 125 XPVQAXPITLNVQFSMVDDLXXYNAIMGRAWLHKMKVIPYTYHQMVSYLTEEGQVNLXGN 184
Query: 239 QATTRTC 245
Q TR C
Sbjct: 185 QLATRQC 191
>gi|54291754|gb|AAV32123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1242
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 96/257 (37%), Gaps = 61/257 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNF-LKKDQIENSTSE 59
C FH H T CR +++ +G +D +PQ ++ ++ T
Sbjct: 510 CTFHGRSSHTTEQCRNIRQ-------RGN------AQDPRPQQGTTVEAPREAVQEQTPS 556
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD--------------- 104
EQ +T +R V + P + SK+ K+
Sbjct: 557 AEQRQDT-------------QRRVIQVITRADPPSQLSKRQRKMQIRMVHSITSAGEGAP 603
Query: 105 --VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
V +SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 604 QYVNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGL 663
Query: 163 EQDKIKPFEQPLIGF--SGIVTYSDGSLLTDFL-------------VVKATSPYNAILGR 207
+ P L GF + LL F VV YNAI GR
Sbjct: 664 PTQALTPAPTSLRGFIVEAVQVLGQAFLLIAFGSGENRRVEQILFDVVNIPYNYNAIFGR 723
Query: 208 QWIHKMRVVPSTYHQVL 224
++K + ++H L
Sbjct: 724 ATLNKFEAI--SHHNYL 738
>gi|38345984|emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
Length = 1847
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ K+ L +
Sbjct: 766 ISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKIGLPTQALT 825
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 826 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 885
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQP 264
+ + L G+ + G Q R+ AS G + NR + S +P
Sbjct: 886 EAIFHHNYLKLKMPGPTGVIVVKGLQ---RSAASKGDLAIINRAVHSVETEP 934
>gi|4206306|gb|AAD11615.1| prpol [Zea mays]
Length = 1317
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 60 ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQELEDKIH 119
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKM 213
PL GF G + G + F +V PYNAI+GR ++
Sbjct: 120 DATHPLCGFGGRQIVALGKITMSVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAF 179
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASN 248
+ + + + G I G Q R N
Sbjct: 180 EAILHPAYLCMKMPSDQGPIAIHGSQEAARRAEGN 214
>gi|147865536|emb|CAN81563.1| hypothetical protein VITISV_019697 [Vitis vinifera]
Length = 522
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDK-QPQNQNNFLKKDQIENST 57
C FH + H T CR L+ +E LI G LK++++ VE + PQ+ N+ +
Sbjct: 266 CVFHKEHGHTTETCRCLQYLVERLIKAGHLKQYLRTDVEGRGAPQHHNS-----GAPKAP 320
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVK-----------LDVQ 106
+ P+ ++N I E + ++ +KR+ P ++C+ +
Sbjct: 321 AAPKAVINYINGDPSDEEYDSR------RKRQKLLPATSIRECINSIRPGLTGGGPRPID 374
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+ F P D PH + L++S++IG+ VRRIL+D GSS +++ + V +
Sbjct: 375 GTIIFPPVDPTRTLQPHCNVLILSLEIGDFDVRRILVDPGSSADLVQASVVGRTGHSLIG 434
Query: 167 IKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYN 202
++ + L GF+G T S G ++ F VV+ SP+N
Sbjct: 435 LENPGRILSGFNGSSTTSLGDIILTVQAGPVTLNVQFSVVQDLSPFN 481
>gi|94502647|ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp. mays]
gi|40795086|gb|AAR91130.1| hypothetical protein (mitochondrion) [Zea mays]
Length = 117
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
S +SF QD + IQ PHDDA+V+ +KIG V+R+L+D GSS +IL ++M LE
Sbjct: 18 SVISFSDQDSEGIQRPHDDAIVLVLKIGGNRVKRVLVDTGSSADILYKRAFDQMNLELRH 77
Query: 167 IKPFEQPLIGFSG 179
+ PL+GF+G
Sbjct: 78 LGQVRTPLVGFTG 90
>gi|147859755|emb|CAN82920.1| hypothetical protein VITISV_029583 [Vitis vinifera]
Length = 354
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 27/127 (21%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D I PH DAL++++ I + D + ++KM ++
Sbjct: 205 ITFSPIDPNCILRPHRDALILTLGISD----------------FDVSVIKKMGFVPTNLE 248
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ L+GF+G T S G ++ F VV+ SP+NAILG W+H M+ +P
Sbjct: 249 NPGRILLGFNGAFTTSLGDIVLPVQVCLVTLNVQFSVVEDLSPFNAILGCAWLHGMKAIP 308
Query: 218 STYHQVL 224
STYHQ++
Sbjct: 309 STYHQMV 315
>gi|147858991|emb|CAN80432.1| hypothetical protein VITISV_014125 [Vitis vinifera]
Length = 662
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQ---PQNQNNFLKKDQIENST 57
CAFH + H T CR+L+ +E LI G LK++++ + + Q+ N + T
Sbjct: 468 CAFHKEHGHTTETCRSLQYLVERLIKAGHLKQYLRSDAGEKVTSQHHNPRAPRAPAAPKT 527
Query: 58 SEPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVS 110
++N I P E ++R + I E + L + +
Sbjct: 528 -----VINYINGGPSDEEYDSRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTII 580
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F P D PH DAL++S++IG+ VRRIL+D G+ +++ + V M +
Sbjct: 581 FPPADPTRTLQPHRDALILSLEIGDFDVRRILVDPGTLADLVQASVVGHM---GHSLASL 637
Query: 171 EQP---LIGFSGIVTYSDGSLL 189
E P L GF+G T S G ++
Sbjct: 638 ENPGRILSGFNGSSTTSLGDII 659
>gi|218198159|gb|EEC80586.1| hypothetical protein OsI_22922 [Oryza sativa Indica Group]
Length = 1510
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL L H+ L++ +I + RI++D GS++N+L T++K+ + +
Sbjct: 1195 MTFTEEDLLLGNKKHNRLLLMYGEIDDLPTNRIMVDGGSAINLLPLRTLKKIGYSRRDLN 1254
Query: 169 PFEQPLIGF-----------SGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ GF S ++ S F ++ A + YNA+LGR W+H+ +VVP
Sbjct: 1255 RSNVVIHGFNQAGQEALGTISLVLKLEPLSTYVTFHIIDAATSYNALLGRPWLHENQVVP 1314
Query: 218 STYHQVLCYQTIYG-IEEIGGDQ 239
ST HQ + Y+ G I I D+
Sbjct: 1315 STLHQCIKYKDKSGEIMRIFADE 1337
>gi|50540675|gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709121|gb|ABF96916.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1631
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 534 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 593
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 594 PAPASLRGFGGEAVRVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 653
Query: 214 RVVPSTYHQVL 224
+ ++H L
Sbjct: 654 EAI--SHHNYL 662
>gi|89179378|gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officinalis]
Length = 887
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+++PHDD LVI++ I LV+RI+ID GS +++L + +M +++ + F PL+GFS
Sbjct: 125 VETPHDDPLVITVVINGYLVKRIMIDTGSLMDVLYTSAFNRMGIDKSHLLLFRGPLVGFS 184
Query: 179 GIVTYSDGSLLTDFLV 194
G+ +G + F++
Sbjct: 185 GLALLPEGMITLTFVL 200
>gi|77551059|gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1427
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 96/241 (39%), Gaps = 29/241 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR +++ S+ Q V+ + Q Q +Q +++
Sbjct: 506 CAFHGRSSHTTEQCRNIRQRGNAQDSRPQQGTTVEAPREVVQEQTP--PAEQCQDAQRRV 563
Query: 61 EQIVNTIMAPLPLEVHMTK--ERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
Q++ P L K R V+ E ++ + + SF P+D +
Sbjct: 564 IQVITRANPPSQLSKRQKKMQTRMVHSITSAGEGAPQYLNQLI--------SFGPEDTEG 615
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH D LVIS +I VRRIL+D GSS +++ KM L + P L GF
Sbjct: 616 VMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPASLRGFG 675
Query: 179 G-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
++ + G + F VV YNAI G ++K + ++H
Sbjct: 676 REPVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGCATLNKFEAI--SHHNY 733
Query: 224 L 224
L
Sbjct: 734 L 734
>gi|147774635|emb|CAN76623.1| hypothetical protein VITISV_015232 [Vitis vinifera]
Length = 512
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 32/248 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H H T C +L+ I++LI +G V QP N L
Sbjct: 147 CAYHQGPGHETDRCTSLRHAIQDLIDQG------LVHLSQPSVTQNPLLAHTTHAVPPSA 200
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL-- 118
I A L VHM E + + + E S + + + +P+ +
Sbjct: 201 SGIHFLDFADLDDHVHMLSEDDSNPEPIMPDVIYEMSGVTLGPRMPAPFRLVPEAASVQT 260
Query: 119 ------------IQ-SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQD 165
+Q S H L IS+ V IL+DNGS++N+ AT +R
Sbjct: 261 ATIEPLILPYYSVQGSDHTRPLYISVGCSGRRVPSILLDNGSALNVCPLATAIALRYAPS 320
Query: 166 KIKPFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMR 214
P Q + + + + LT F V++ ++ +N +LGR WIH+
Sbjct: 321 DFGPSTQTVRAYDSTRREVMGTLEIELLIGPATFLTVFQVLRISTSFNLLLGRPWIHRSG 380
Query: 215 VVPSTYHQ 222
+PS+ HQ
Sbjct: 381 AIPSSLHQ 388
>gi|38347142|emb|CAD39495.2| OSJNBa0039G19.2 [Oryza sativa Japonica Group]
Length = 1136
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLK-----EFVKVEDKQPQNQNNFLKKDQIEN 55
C +HN H T DC+ ++ I+ I G++K + +KV+++ + K+Q
Sbjct: 250 CKWHNYGSHSTNDCKVFRQQIQVAIEGGKIKFDDSKKPMKVDEEDKAQPGVGVSKNQAAT 309
Query: 56 STSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ + + + T K+ +++ EE S + V L + V P+
Sbjct: 310 ADEAKRLAKGKSVVTASVNMVFTLPAEFGAKQADVDEVEEASARLV-LSPEQAVFEKPEG 368
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
K + H L I+ + + ++++D G++VN++ AT K+ + + L
Sbjct: 369 TK---NRHLKPLYINGYVNEKPMSKMMVDGGAAVNLMPYATFRKLGRNTEDLIKTSMVLK 425
Query: 176 GFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F G + + G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 426 DFGGNPSETKGVLNLELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 485
Query: 225 CYQTIYGIEEIGGDQATTRTCA 246
IE + D++ A
Sbjct: 486 IQWQGNKIEIVLADKSVNVASA 507
>gi|38567736|emb|CAE76024.1| B1292H11.10 [Oryza sativa Japonica Group]
Length = 1326
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 59/256 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H H T CR +++ +G +D++PQ + + E
Sbjct: 598 CAYHGRSSHTTEQCRNIRQ-------RG------NAQDQRPQ-----------QGAAIEA 633
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS------------- 107
+ AP P+E +R V + P + SK+ K+ +++
Sbjct: 634 PREAAQEQAP-PIEQRQDIQRRVIQVITRADPPVQQSKRQKKMQLRTVYNIIAAGKGAPR 692
Query: 108 ----EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
++SF P+D++ + PH D LVIS K+ VRRIL+D GSS +++ KM L
Sbjct: 693 YLNQQISFGPEDVEGVLFPHQDPLVISAKVAGFEVRRILVDRGSSADVIFAEAYAKMGLP 752
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ L GF G ++ + G + F VV YNAI GR
Sbjct: 753 TLALTEAPASLRGFGGKAVQVLGQVQLVIAFGTGENRREEQILFDVVNIPYNYNAIFGRA 812
Query: 209 WIHKMRVVPSTYHQVL 224
++ + ++H L
Sbjct: 813 TLNMFEAI--SHHNYL 826
>gi|110288815|gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1735
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 59/256 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H CR +++ +G V+D +PQ + +T E
Sbjct: 431 CAFHGRSLHTMEQCRNIRQ-------RG------NVQDPRPQ-----------QGATVEA 466
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ-------------- 106
+ PL E +R V + P + SK+ K+ ++
Sbjct: 467 PREAFQEQTPL-AEQRQDAQRRVIQVITRADPPSQLSKRQKKMQIRMVHSITSAGEGAPQ 525
Query: 107 ---SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
+ F P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 526 YLNQLIYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLT 585
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ P L GF G ++ + G + F VV YN I GR
Sbjct: 586 SQALTPAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNTIFGRA 645
Query: 209 WIHKMRVVPSTYHQVL 224
++ V+ ++H L
Sbjct: 646 TLNMFEVI--SHHNYL 659
>gi|78708446|gb|ABB47421.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 678
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 398 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 457
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
P L F + +L D + + YNAI GR ++K + ++H L
Sbjct: 458 PAPASLRAFGSGENRREEQILFDVIDIPYN--YNAIFGRATLNKFEAI--SHHNYL 509
>gi|13992677|gb|AAK51571.1|AC022352_7 Putative retroelement [Oryza sativa Japonica Group]
Length = 1497
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +I+ KM L +
Sbjct: 425 ISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPTQALT 484
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 485 PAPASLRGFGGEPVQVLGQALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRATLNKF 544
Query: 214 RVVPSTYHQVL 224
+ ++H L
Sbjct: 545 EAI--SHHNYL 553
>gi|19225035|gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1722
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 59/256 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H CR +++ +G V+D +PQ + +T E
Sbjct: 418 CAFHGRSLHTMEQCRNIRQ-------RG------NVQDPRPQ-----------QGATVEA 453
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ-------------- 106
+ PL E +R V + P + SK+ K+ ++
Sbjct: 454 PREAFQEQTPL-AEQRQDAQRRVIQVITRADPPSQLSKRQKKMQIRMVHSITSAGEGAPQ 512
Query: 107 ---SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
+ F P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 513 YLNQLIYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLT 572
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ P L GF G ++ + G + F VV YN I GR
Sbjct: 573 SQALTPAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNTIFGRA 632
Query: 209 WIHKMRVVPSTYHQVL 224
++ V+ ++H L
Sbjct: 633 TLNMFEVI--SHHNYL 646
>gi|31432029|gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 387 QISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTLAL 446
Query: 168 KPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHK 212
P L GF G +V + G + F VV YNAI GR ++K
Sbjct: 447 TPAPASLRGFGGKAVQVLGQAQLLVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNK 506
Query: 213 MRVVPSTYHQVL 224
+ ++H L
Sbjct: 507 FEAI--SHHNYL 516
>gi|21671971|gb|AAM74333.1|AC114474_25 Hypothetical protein similar to putative retroelements [Oryza
sativa Japonica Group]
Length = 597
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 398 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 457
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
P L F + +L D + + YNAI GR ++K + ++H L
Sbjct: 458 PAPASLRAFGSGENRREEQILFDVIDIPYN--YNAIFGRATLNKFEAI--SHHNYL 509
>gi|147817100|emb|CAN66440.1| hypothetical protein VITISV_035237 [Vitis vinifera]
Length = 466
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 14 CRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIMAPLPL 73
CR+L ++ LI G L++ V+ +Q + Q +++ P ++N I
Sbjct: 213 CRSLHYLVKRLIRVGHLRQHVRTVIRQRKTVRG--XAVQTPTTSASPRVVINYIHGDPAD 270
Query: 74 EVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL----------KLIQSPH 123
E + +K + ++R + A + L S P D +++QS H
Sbjct: 271 EKYNSKRK----RQRVLYAASIRERISFILHNLPGRSTCPMDGTITFPSINANRVLQS-H 325
Query: 124 DDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTY 183
+D L++++ I D +T ++M L ++ L F+G +T
Sbjct: 326 EDVLILTLGISK----------------FDMSTYKQMGLPPSALENPGWILSXFNGAMTI 369
Query: 184 SDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGI 232
S G ++ F VV+ SP+ AI+G W+H M+V+PSTYHQ++ Y T G
Sbjct: 370 SLGDVVLPIQVGPITQNVQFSVVEELSPFKAIMGCAWLHSMKVIPSTYHQMVSYLTKBGQ 429
Query: 233 EEIGGDQ 239
+I G Q
Sbjct: 430 IDIFGSQ 436
>gi|147838578|emb|CAN72118.1| hypothetical protein VITISV_012997 [Vitis vinifera]
Length = 798
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 174 LIGFSGIVTYSDGSLL--------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
L+GF+G+ T S G ++ F VV SP+N ILGR W++ M+ +PSTYHQ++
Sbjct: 15 LLGFNGVATTSLGDIVLPVQVTLNVQFSVVGDLSPFNVILGRAWLYYMKAIPSTYHQMVS 74
Query: 226 YQTIYGIEEIGGDQATTRTC 245
+ T G + G Q R C
Sbjct: 75 FLTKDGQTNLYGSQLAARQC 94
>gi|147836258|emb|CAN71008.1| hypothetical protein VITISV_025165 [Vitis vinifera]
Length = 269
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 10/120 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F DL L+ PH+DAL++++ I VRRIL++ GSS N+L + ++M ++
Sbjct: 139 ITFPSVDLNLVLQPHEDALILTLGINEYDVRRILVNLGSSANLLQVSAFKQMGFPPFALE 198
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
E+ L GF+G T S G+++ L V+A +L Q++ ++ STYHQ++ Y T
Sbjct: 199 NPERILSGFNGASTTSLGNIV---LFVQARP---VVLNVQFL----IISSTYHQMISYLT 248
>gi|343887294|dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H+DALVI + +RRIL+D GSSV+IL + ++ M + K++ L GF G
Sbjct: 548 HEDALVIKAMVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRL 607
Query: 181 -------VTYSDGS------LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
+ + GS ++ F+VV+ SPY ILGR +I + V ST++ L Y+
Sbjct: 608 TPMGINELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALKYR 667
Query: 228 TIYGIEEIGGDQATTRTCASNG 249
+ + G Q TR+C +
Sbjct: 668 VNGVVGVVKGVQKMTRSCYATA 689
>gi|356561618|ref|XP_003549078.1| PREDICTED: uncharacterized protein LOC100797724 [Glycine max]
Length = 2163
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + + LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKELIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ L G
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKLVIWREDG 1053
Query: 232 I-EEIGGDQATTRT 244
I E I DQ+ ++
Sbjct: 1054 IVENIEADQSFYKS 1067
>gi|356533003|ref|XP_003535058.1| PREDICTED: uncharacterized protein LOC100797932 [Glycine max]
Length = 2105
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ N + ++LID G++VN++ + + K+ + L + G
Sbjct: 934 HLKPLFIRAKVENVGINKVLIDGGAAVNLMPRSMLYKIGKHDTDLSAHNIVLSNYEGKTG 993
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ-VLCYQTIY 230
YS G++ D FLV+++ + +N +LGR+WIH + VPST HQ ++ ++
Sbjct: 994 YSLGAIQVDVAVGSIVRPTLFLVIQSKANFNLLLGREWIHGVGAVPSTLHQKIIIWREDG 1053
Query: 231 GIEEIGGDQATTRTCASN 248
+ I DQ+ ++ N
Sbjct: 1054 IVGNIEADQSFYKSEVDN 1071
>gi|147810474|emb|CAN63220.1| hypothetical protein VITISV_020217 [Vitis vinifera]
Length = 355
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLT------- 190
VR +L+D GSSV++L + ++M ++ + L GF+G +T G +L
Sbjct: 219 VREVLVDLGSSVDLLQMSVYKQMGYSPFALENLGRFLFGFNGDMTTFLGDILLPVQAGPI 278
Query: 191 ----DFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F + SPYNAI+GR W+ +M+V+ TYHQ + Y G ++ G Q C
Sbjct: 279 TLNLQFPMADDLSPYNAIMGRAWLRRMKVIHFTYHQRVSYPIEEGQVDLLGSQLVACQC 337
>gi|147841472|emb|CAN62100.1| hypothetical protein VITISV_033308 [Vitis vinifera]
Length = 498
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE--DKQPQNQNNFLKKDQIENSTS 58
CAFH H T +CR L ++ LI G LK++++ + D+ +N +
Sbjct: 236 CAFHKQHGHTTEECRCLHYLVKRLIRAGHLKQYLRSDAGDRDASQNHNIRAPRAPAAPKA 295
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERN----VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
++N I P E ++R V + I + + + F P
Sbjct: 296 ----VINYINGGPADEEYDSKRKRQKLLQVASVRERINSIRPGITGGGPCPIDGTIIFPP 351
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D I PH DAL++S++IG+ VR IL+D GSS +++ + V M ++ +
Sbjct: 352 VDPTRILQPHRDALIMSLEIGDFDVRCILVDPGSSADLVQASVVSHMGHNLTGLENPGRI 411
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYN 202
L F+G T S G ++ F VV+ SP+N
Sbjct: 412 LSEFNGSSTTSLGDIILPIQAGPVTLNVQFSVVQDLSPFN 451
>gi|224150480|ref|XP_002336963.1| predicted protein [Populus trichocarpa]
gi|222837468|gb|EEE75847.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF +DL L H+ I + +V RIL+D+GS+VNIL T++++ + D+
Sbjct: 234 TEISFNDEDLLLGSKLHNRLPFIKGYVDEKMVNRILVDDGSAVNILPLKTMKELGIPMDE 293
Query: 167 IKPFEQPLIGFSG-----------IVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
+ P + GF+ + D F V+ + YN +LGR WIH+ +
Sbjct: 294 LFPSHLMIQGFNQEGQNAIGKIRLAIHMEDMKFNALFHVIDVKTTYNMLLGRPWIHENGI 353
Query: 216 VPSTYHQVLCY 226
+ ST HQ Y
Sbjct: 354 ISSTLHQCFKY 364
>gi|78708117|gb|ABB47092.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1064
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
V +SF P+D + + PH D LVIS +I VRRIL+D GSS +I+ KM L
Sbjct: 20 VNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDEGSSADIIFAEAYAKMGLPT 79
Query: 165 DKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQW 209
+ P L GF G ++ + G + F VV YNAI GR
Sbjct: 80 QALTPAPASLRGFGGEPVQVLGQALLLIAFGSGDNRREEQILFDVVDIPYNYNAIFGRAT 139
Query: 210 IHKMRVVPSTYHQVL 224
++K + ++H L
Sbjct: 140 LNKFEAI--SHHNYL 152
>gi|89179403|gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1181
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF +D++ ++ HD L + IG+ + R+ +D GS+++I+ ++ + + ++
Sbjct: 164 ISFTQEDMQ-VKHEHDRPLYYTGYIGSSEISRVQVDPGSALSIMPYRVMQVLGIPMHRLH 222
Query: 169 PFEQPLIGFSGIVTYSDGSL-----LTDF------LVVKATSPYNAILGRQWIHKMRVVP 217
+ + GF+ T G + + D ++ A + YN +LGR WIH R+VP
Sbjct: 223 TTQTTIFGFNANSTRPLGKIKLRCQIGDLKSEVACYIIDADTSYNLLLGRPWIHANRIVP 282
Query: 218 STYHQVLCYQTIYG 231
ST HQV+ Y G
Sbjct: 283 STLHQVMKYANDEG 296
>gi|224054366|ref|XP_002298224.1| predicted protein [Populus trichocarpa]
gi|222845482|gb|EEE83029.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF +DL L ++ I + +V RIL+D+GS+VNIL T++++ + D+
Sbjct: 409 TEISFNDEDLLLGSKLYNRPFFIKGYVDQKMVNRILVDDGSAVNILPLKTMKELGIPMDE 468
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----LTD------FLVVKATSPYNAILGRQWIHKMRV 215
+ P + GF+ + G + + D F V+ A + YN +LGR W+H+ +
Sbjct: 469 LFPSHLMIQGFNQGGQNAIGKIRLAMHMEDMESNALFHVIDAKTTYNMLLGRPWMHENGI 528
Query: 216 VPSTYHQVLCY 226
+ ST HQ Y
Sbjct: 529 ISSTLHQCFKY 539
>gi|27764661|gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 971
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 25/239 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T C+ +++ ++ Q ++ + Q Q +E
Sbjct: 615 CAFHGRSSHTTEQCQNIRQRGNAQDTRSQQGTTIEAPREAAQEQT-----PPVEQRQDAQ 669
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ I P +++ ++ R + + K+ + V +SF P+D + +
Sbjct: 670 RRVIQVITRADPPGQLSKRQKKMHI--RAVHSITSAGKRAPQY-VNQLISFGPEDAEGVM 726
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG- 179
PH D LVIS +I V RIL+D GSS +++ KM L + P + GF G
Sbjct: 727 FPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGE 786
Query: 180 ----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAILGR ++K + ++H L
Sbjct: 787 AVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAI--SHHNYL 843
>gi|147838753|emb|CAN69509.1| hypothetical protein VITISV_012512 [Vitis vinifera]
Length = 443
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 53/236 (22%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR+L +E LI G LK + S
Sbjct: 231 CAYHKEHEHTTEQCRSLHYLVERLIKAGHLK----------------YRTSGTPRSPIAS 274
Query: 61 EQIVNTIMA-PLPLEVHMTKERN------VYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
+ ++N I PL E ++R C++ P +D + F
Sbjct: 275 KVVINYIHGGPLDEEYDSKRKRQRLLRAASVCERINSIRPGLTGGSAHPID--GTIIFPL 332
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDA-TVEKMRLEQDKIKPFEQ 172
D I P+ DAL++S IG+ VRRIL+D GSS ++L + ++E+ Q
Sbjct: 333 VDPTRILQPYRDALILSFGIGDFDVRRILVDPGSSADLLQASDSMER------------Q 380
Query: 173 PLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
PL + +S + + L R W+H M+ +PSTYHQ++ + T
Sbjct: 381 PL-SLETLCYWSKQA--------------QSSLIRTWLHYMKAIPSTYHQMVSFLT 421
>gi|90265091|emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group]
Length = 1761
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 59/285 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKK---YIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIEN 55
CAFH H T CR +++ + + +G E + V+++ P + KK QI
Sbjct: 636 CAFHGRSSHTTEQCRNIRQRGNAQDPRLQQGTTVEAPREAVQEQTPPAEQRQDKKMQI-- 693
Query: 56 STSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
++V++I + + K + +SF P+D
Sbjct: 694 ------RMVHSITS---------------------------AGKGAPQYLNQLISFGPED 720
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
+ + PH D LVIS +I VRRIL+D GSS +++ KM L + P L
Sbjct: 721 AEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPASLR 780
Query: 176 GFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTY 220
GF ++ + G + F VV YNAI GR ++K +
Sbjct: 781 GFGREEVQVLGQALLLIAFGSGKNRREEQILFDVVDIPYNYNAIFGRATLNKFEAISHHN 840
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQP 264
+ L G+ + G Q + AS G + NR + S +P
Sbjct: 841 YLKLKMPGPTGVIVVKGLQP---SAASKGDLAIINRAVHSVETEP 882
>gi|358343197|ref|XP_003635693.1| hypothetical protein MTR_001s0012 [Medicago truncatula]
gi|355525248|gb|AET05642.1| hypothetical protein MTR_001s0012 [Medicago truncatula]
Length = 266
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I KI V ++ +D+G++VN+L ++ V K+ L +KP L + G
Sbjct: 138 HLKPLFILAKINGVGVNKVPVDDGATVNLLPESFVGKIGLFDTDLKPHNVILTNYEGTTG 197
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
S G++ D F+VV + +N +LGR+WIH + VPST HQ
Sbjct: 198 NSLGAVELDLVVGSVSRTTMFMVVPSKVNFNMLLGREWIHGVGAVPSTVHQ 248
>gi|19881722|gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1292
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 345 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 404
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 405 PAPVSLRGFGGEAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 464
Query: 214 RVVPSTYHQVL 224
+ ++H L
Sbjct: 465 EAI--SHHNYL 473
>gi|22748420|gb|AAN05385.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 629
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 442 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 501
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GFS ++ + G + F VV YNAI GR ++K
Sbjct: 502 PAPASLRGFSREAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 561
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQPWKK 267
+ + L G+ + G Q + AS G + NR + S +P ++
Sbjct: 562 EAISHHNYLKLKMPGPTGVIVVKGLQP---SAASKGDLAIINRAVHSVETEPHER 613
>gi|29244661|gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709218|gb|ABF97013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 908
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 63/239 (26%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR ++++ +D +PQ + P
Sbjct: 634 CAFHGRSSHTTEQCRNIRQH-------------GNAQDPRPQQGT----------TVEAP 670
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ V +E P E + + + +SF P+D K +
Sbjct: 671 REAV-----------------------QEQTPPAEQRQDVQRRYLNQLISFGPEDAKGVM 707
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG- 179
PH D LVIS +I VRRIL+D GSS +++ KM L + P + L GF G
Sbjct: 708 FPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTPAPESLHGFGGE 767
Query: 180 ----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ + G + F VV YNAI GR ++K + ++H L
Sbjct: 768 AVQILGQALFLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI--SHHNYL 824
>gi|147802357|emb|CAN77127.1| hypothetical protein VITISV_003358 [Vitis vinifera]
Length = 402
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 25/116 (21%)
Query: 130 SIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL 189
SI++G+ VRRIL+D GSS ++L A+V+ G VT L
Sbjct: 287 SIRMGDFDVRRILVDLGSSTDLLQ-ASVQ-------------------VGPVT-----LN 321
Query: 190 TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F V++ SP+N IL W++ M+V+PSTYHQ++ + T G ++ G Q R C
Sbjct: 322 VQFSVIQDLSPFNVILECTWLYYMKVIPSTYHQMVSFLTEDGQIDLHGSQLPARQC 377
>gi|110288971|gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2035
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ M L +
Sbjct: 849 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLPTQSLT 908
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 909 PAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 968
Query: 214 RVV 216
+
Sbjct: 969 EAI 971
>gi|78708084|gb|ABB47059.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 310
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L + I V R+L+D G++VN++ + +++ D++K L GF+G T
Sbjct: 123 HMKPLYLKGHIDGKPVSRMLVDRGAAVNLMPYSLFKRLGRGDDELKKTNMILNGFNGEPT 182
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ G +L T F +V YN ILGR WIH VPST HQ L
Sbjct: 183 EAKGIFSVELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCLIQWDGDD 242
Query: 232 IEEIGGDQAT 241
+E + D +T
Sbjct: 243 VEIVQADTST 252
>gi|147815427|emb|CAN70312.1| hypothetical protein VITISV_011858 [Vitis vinifera]
Length = 438
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H D H T CR+L +E+L+ G LK++++ ++ + Q + + P
Sbjct: 228 CAYHKDHGHTTETCRSLHYMVEDLLKAGHLKQYIRTAPNGGESSHG-----QGPRAPAAP 282
Query: 61 -EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
I+N I + MT Y P S +D + F D +
Sbjct: 283 IRAIINYIHG----DPWMTTTVQEYISSIR---PGLASGSIHPID--GTIVFPAMDPARV 333
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
PH DAL++++ +G+ V+RILID GSS ++L A + R +I+ F
Sbjct: 334 LHPHRDALILTLGVGDFDVKRILIDLGSSADLLQVAIPGESRKSPVRIQWF 384
>gi|18057150|gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
Length = 1931
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ M L +
Sbjct: 772 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLPTQSLT 831
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 832 PAPTSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 891
Query: 214 RVV 216
+
Sbjct: 892 EAI 894
>gi|18254415|gb|AAL66756.1|AF464738_7 putative prpol [Zea mays]
Length = 969
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL+L PH+DA+VIS I LV +L+D GS+ +I+ +M+ +DKI
Sbjct: 254 ITFSQEDLQLKDYPHNDAMVISCIIKGFLVHNVLVDTGSAADIIVAKAFRQMQEPEDKIH 313
Query: 169 PFEQPLIGFSG--IVTYSDGSLLTDFLVVKATS-------------PYNAILGRQWIHKM 213
PL GF G IV + F V T PYNAI+G ++
Sbjct: 314 DSTHPLCGFGGRQIVALDKIMMPVTFGFVNNTRTEQVVFDIVDMEYPYNAIIGHGTLNAF 373
Query: 214 RVVPSTYHQVLCYQTI---YGIEEIGGDQATTRTCASN 248
+ H Y I G I G Q R N
Sbjct: 374 EAI---LHPAYLYMKIPSDQGPIAIHGSQEAARKAEGN 408
>gi|19881646|gb|AAM01047.1|AC091735_20 putative pol polyprotein [Oryza sativa Japonica Group]
Length = 505
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L + I V R+L+D G++VN++ + +++ D++K L GF+G T
Sbjct: 318 HMKPLYLKGHIDGKPVSRMLVDRGAAVNLMPYSLFKRLGRGDDELKKTNMILNGFNGEPT 377
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ G +L T F +V YN ILGR WIH VPST HQ L
Sbjct: 378 EAKGIFSVELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCLIQWDGDD 437
Query: 232 IEEIGGDQAT 241
+E + D +T
Sbjct: 438 VEIVQADTST 447
>gi|147815737|emb|CAN68206.1| hypothetical protein VITISV_019388 [Vitis vinifera]
Length = 466
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 174 LIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G +L FLVV+ SP+N ILGR W+H M+ +P TYHQ
Sbjct: 359 LSGFNGSSTTSLGDIVLSVQAGPVTLNVQFLVVQDLSPFNVILGRTWLHYMKAIPYTYHQ 418
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G ++ G Q R C
Sbjct: 419 MVSFLTKDGQIDLYGSQLAARQC 441
>gi|77555179|gb|ABA97975.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 849
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L + + V R+L+D G++VN++ + +K+ E D++K L GF+G T
Sbjct: 662 HMKPLYLKGHVDGKPVSRMLVDAGAAVNLMPYSLFKKLGREDDELKKTNMILSGFNGEPT 721
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G +L T F +V YN ILGR WIH VPST HQ L
Sbjct: 722 GARGIFSAELTVGNKTLPTAFFIVDVQGNYNVILGRCWIHANCCVPSTLHQCL 774
>gi|449465691|ref|XP_004150561.1| PREDICTED: uncharacterized protein LOC101217069 [Cucumis sativus]
Length = 715
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H AL I +K + ++ R+L+DNGS++NI+ +T+ K+ ++ IK + F G
Sbjct: 396 HIKALHIQVKYKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSYIKSSTMVVRAFDGSRR 455
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+ + F V++ T Y+ +LGR WIH VVPST HQ L +
Sbjct: 456 EVIGDIELPIKIGPCTFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKF 510
>gi|110288780|gb|ABG65975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 528 ISFGPEDAEGVIFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 587
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GFS ++ + G + F VV YNAI GR ++K
Sbjct: 588 PAPASLRGFSREAVQVLGQTLLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKF 647
Query: 214 RVVPSTYHQVL 224
+ ++H L
Sbjct: 648 EAI--SHHNYL 656
>gi|449472426|ref|XP_004153590.1| PREDICTED: uncharacterized protein LOC101218743 [Cucumis sativus]
Length = 625
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H AL I +K + ++ R+L+DNGS++NI+ +T+ K+ ++ IK + F G
Sbjct: 306 HIKALHIQVKYKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSYIKSSTMVVRAFDGSRR 365
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+ + F V++ T Y+ +LGR WIH VVPST HQ L +
Sbjct: 366 EVIGDIELPIKIGPCTFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKF 420
>gi|147839005|emb|CAN77064.1| hypothetical protein VITISV_032535 [Vitis vinifera]
Length = 501
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
CAFH + H T + R L +E LI G LK++++ VE + +N + +
Sbjct: 253 CAFHKEHGHTTEEWRCLHYLVERLIRAGHLKQYLRSDVEGRNASQNHN----TGAPKAPA 308
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLP 113
P+ ++N I P E ++R + + I + + + F P
Sbjct: 309 APKAVINYINGGPSDEEYDSKRKRQKLLRAASVRDRINSIRPGITGGXPRPIDGTIIFPP 368
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D I PH DAL++S++IG+ VR IL+D+GSS +++ + V M ++ +
Sbjct: 369 VDPTRILQPHRDALIMSLEIGDFDVRCILVDSGSSADLVQASVVSHMGHNLIGLENPGRI 428
Query: 174 LIGFSGIVTYSDGSLL 189
L GF+G T S G ++
Sbjct: 429 LSGFNGSSTTSLGDII 444
>gi|147800134|emb|CAN73207.1| hypothetical protein VITISV_009747 [Vitis vinifera]
Length = 163
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 131 IKIGNCL-VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL 189
++IGN V +ILID +S ++L + +M + ++ LIGF+G S G ++
Sbjct: 7 LEIGNFRDVCKILIDLRNSTDLLQMSAYRQMGYSLSTLDNLDRILIGFNGASIVSMGDVI 66
Query: 190 -----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
F +V+ PYNAI+G W+HKM+V+ STYHQ++ Y
Sbjct: 67 LPIQASPVTLNVLFSIVEDLLPYNAIMGGVWLHKMKVISSTYHQMVSY 114
>gi|68685649|gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
+D + + +PH D LV+ + I N LV+R LID G+ NI+ + L+ + + P P
Sbjct: 52 KDYEGVVAPHSDPLVVHLDISNHLVKRCLIDTGAYTNIMFRECFLNLGLKIEDLSPCTNP 111
Query: 174 LIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQWIHKMRVVPS 218
L FSG GS+ L++F+V+ +S YN ++GR + + V S
Sbjct: 112 LYSFSGAGLVPLGSIRLPVMFGQTDAAKNVLSEFVVIDGSSAYNVLIGRVTLSEADAVMS 171
Query: 219 TYHQVLCY 226
L Y
Sbjct: 172 IRALTLMY 179
>gi|19697445|gb|AAL93080.1|AC093180_27 putative polyprotein [Oryza sativa Japonica Group]
Length = 415
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF P D + + PH D LVIS +I VRRIL+D G+S +++ KM L +
Sbjct: 266 QISFRPGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLATQAL 325
Query: 168 KPFEQPLIGFSG--IVTYSDGSLLTDFL-------------VVKATSPYNAILGRQWIHK 212
P L FSG + L+ F VV YNAI GR ++K
Sbjct: 326 TPAPASLRRFSGEAVQVLGQAQLMVAFRTAENRREEQVLFDVVDIPYNYNAIFGRATLNK 385
Query: 213 MRVVPSTYHQVL 224
+ ++H L
Sbjct: 386 FEAI--SHHNYL 395
>gi|32483247|emb|CAE02548.1| OSJNBb0069N01.14 [Oryza sativa Japonica Group]
Length = 722
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 41/240 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLK--------KDQ 52
C+ HN RH DCR++K E + K + E K P N + D
Sbjct: 214 CSVHNTYRHSLADCRSVKNLAERFRKADEEKRQSRWEGKAPATPANDRRGEAKKKAPADD 273
Query: 53 IENSTSEPEQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAP---EEFSKKC----VKL- 103
++S QI +A L T R +RE+ A E ++K VKL
Sbjct: 274 GDDSKDLEFQIHQGTVATLDGGACAHTSRRGFKTMRRELLAAVPTHEAARKARWSEVKLT 333
Query: 104 -DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
D + L + KL ALV+S I N ++R+L+D G+S++I+ AT + ++
Sbjct: 334 FDQSDHPTVLTRGGKL-------ALVVSPTIHNVKMKRVLVDEGASLSIISPATFDALKA 386
Query: 163 EQDKIKPFEQPLIGFS-------GIV----TYSDGSLL----TDFLVVKATSPYNAILGR 207
K++P P+IG + G V T+ D + DF V PYNA+LGR
Sbjct: 387 PGMKLQP-SLPIIGVTPGHRWPLGHVELPLTFGDSTNFRTERIDFDVADLNLPYNAVLGR 445
>gi|19551092|gb|AAL91597.1|AC099400_3 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31429752|gb|AAP51761.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 586
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 45/251 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
C H RH DC KK +E+ ++ + K VE + PQ E+ +
Sbjct: 311 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKSKRVRMVEKDAEAAPQ-----------ESDS 359
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
+ P+ ++ H+ + Y KRE + E + +K+ + ++ F
Sbjct: 360 AYPDSDLHV--------SHIFRGSTAYSSKREYKKVEREVCLTWQGAALKMKWSEQKIEF 411
Query: 112 LPQDL-KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
L +D K P +V+ I N V R+LID GSS+N+L + ++ M + + ++ P
Sbjct: 412 LEEDHPKTAVIPRRYPIVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPT 471
Query: 171 EQPLIG------------FSGIVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMR 214
+QP G + VT+ + F VV+ + YNAI+GR + K
Sbjct: 472 DQPFHGITPQSSSKPLGKITSPVTFGQANNFRTEQITFDVVEFDTAYNAIIGRTALAKFM 531
Query: 215 VVPSTYHQVLC 225
V +QVL
Sbjct: 532 VASHYAYQVLS 542
>gi|147834260|emb|CAN66024.1| hypothetical protein VITISV_028772 [Vitis vinifera]
Length = 294
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 87 KREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNG 146
K I + + K+ V ++F P D+ + H+D L++ + + VRRIL+D G
Sbjct: 162 KEWISSLQHTFKEGSVYPVDDTITFPPIDVNRVLQSHEDILILMLGVSKFDVRRILVDLG 221
Query: 147 SSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLVV 195
SS ++L +T +M ++ L GF+G T S G +L FLVV
Sbjct: 222 SSFDLLQMSTYRQMGYSPSNLENLGHLLSGFNGATTTSLGDVVLPVQAGPITLSVRFLVV 281
Query: 196 KATSPYNAILGR 207
SPYNAI+G
Sbjct: 282 DDLSPYNAIMGH 293
>gi|38346866|emb|CAE02216.2| OSJNBb0002N06.6 [Oryza sativa Japonica Group]
gi|116309528|emb|CAH66592.1| OSIGBa0092G14.3 [Oryza sativa Indica Group]
Length = 1607
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 110/296 (37%), Gaps = 61/296 (20%)
Query: 2 AFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPE 61
A+H H T CR +++ +G +D +PQ E + P
Sbjct: 576 AYHGRSSHTTEQCRNIRQ-------RG------NAQDPRPQQ----------ETTVEAPR 612
Query: 62 QIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ--------------- 106
++V P E +R + + P + SK+ K+ ++
Sbjct: 613 EVVQEQTPPA--EQRQDAQRRIIQVITRADPPSQLSKRQKKMQIRMVHNITLVGEGAPQY 670
Query: 107 --SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+SF P+D + + H D LVIS +I VRRIL+D GSS +++ KM L
Sbjct: 671 LNQLISFGPEDAEGVMFLHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 730
Query: 165 DKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQW 209
L GF G ++ + G + F VV YNAI GR
Sbjct: 731 QAFTLAPASLRGFGGETVQVLSQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRAT 790
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQP 264
++K + + L G+ + G Q + AS G + NR + S +P
Sbjct: 791 LNKFEAISHHNYLKLKMPGPIGVIVVKGLQP---SAASKGDLAIINRAVHSVETEP 843
>gi|147787395|emb|CAN62340.1| hypothetical protein VITISV_035644 [Vitis vinifera]
Length = 507
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 424 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTDEGQTDLYGSQLAARQC 482
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE 37
C FH D H T CR+L+ +E LI G LK++++ +
Sbjct: 266 CXFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSD 302
>gi|147784030|emb|CAN72304.1| hypothetical protein VITISV_036274 [Vitis vinifera]
Length = 506
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 423 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTBEGQTDLYGSQLAARQC 481
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE 37
CAFH D H T CR+L+ +E LI G LK++++ +
Sbjct: 266 CAFHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSD 302
>gi|50080332|gb|AAT69666.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 973
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 663 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 714
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 715 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPSTPQYLRW---SEIT-----I 762
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 763 KFNRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 822
Query: 169 PFEQPLIGFSGIVTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRVVP 217
P P G + VT+ + + T+ F V + Y+AILGR + K VP
Sbjct: 823 PSNAPFHGITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVP 875
>gi|110289037|gb|ABG66060.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 542
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN RH DCR++K E + K + E K P +++ + ++
Sbjct: 211 CSVHNSYRHSLADCRSVKNLAERFRKADENKRQGRRESKAPATSTGDRREEAKNKAPADD 270
Query: 60 -----------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAP---EEFSKKCVKLDV 105
P+ V T+ T R +RE+ A E ++K L+V
Sbjct: 271 GGDSEDLDFQIPQGTVATLDGGGGGACAHTSRRGFKVMRRELLAAVPTHEAARKARWLEV 330
Query: 106 QSEVSFLPQDLKLIQSPHDD-ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F D + S ALV+S I N ++R+L+D G S++I+ A+ + ++
Sbjct: 331 K--LTFDQSDHPTVLSRGGKLALVVSPTIHNVKMKRVLVDGGDSLSIISPASFDALKAPG 388
Query: 165 DKIKP----------FEQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGRQWI 210
K++P PL VT+ D + DF V PYN +LGR +
Sbjct: 389 MKLQPSLSIIGVTPGHMWPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNVVLGRPAL 448
Query: 211 HKMRVVPSTYHQVL 224
++ + +T++ L
Sbjct: 449 --VKFMAATHYAYL 460
>gi|89179430|gb|ABD63165.1| F5M15.26, related [Asparagus officinalis]
Length = 320
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
++ HD L + IG+ + R+ +D GS+++I+ ++ + + ++ + + GF+
Sbjct: 3 VKHEHDRPLYYTGYIGSSEISRVQVDPGSALSIMPYRVMQVLGIPMHRLHTTQTTIFGFN 62
Query: 179 GIVTYSDGSL-----LTDF------LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
T G + + D ++ A + YN +LGR WIH R+VPST HQV+ Y
Sbjct: 63 ANSTRPLGKIKLRCQIGDLKSEVACYIIDADTSYNLLLGRPWIHANRIVPSTLHQVMKYA 122
Query: 228 TIYG 231
G
Sbjct: 123 NDEG 126
>gi|147836495|emb|CAN77599.1| hypothetical protein VITISV_001305 [Vitis vinifera]
Length = 202
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H D H C++L +E+L+ G LK++V E ++ + + Q+ +++ P
Sbjct: 42 CTYHKDHGHTMEQCKSLHYLVEKLLRVGHLKQYVHSEGRRGETTQD--PATQVPTTSAAP 99
Query: 61 EQIVNTIMAPLPLEVHMTKERN-----VYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+ I+N I E + +K + V + + + + ++F D
Sbjct: 100 KAIINYINGESIDEKYNSKRKRQRLLRVVSVREYVSFIQPGLPDGGTRPIDGVITFSLMD 159
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVE 158
+ PH+DAL++++ I + VRRI++D G+S ++L +T +
Sbjct: 160 PNRVLQPHEDALILTLGINDFDVRRIVVDPGNSADLLQLSTFK 202
>gi|50838920|gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1168
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
+D + + PH D LVIS +I VRRIL+D GSS +++ KM L + P
Sbjct: 358 EDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTS 417
Query: 174 LIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPS 218
L GF G IV + G + F VV YNAI GR ++K V+
Sbjct: 418 LRGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVI-- 475
Query: 219 TYHQVL 224
++H L
Sbjct: 476 SHHNYL 481
>gi|38346515|emb|CAE03810.2| OSJNBa0027H09.10 [Oryza sativa Japonica Group]
gi|38567795|emb|CAE76081.1| B1340F09.19 [Oryza sativa Japonica Group]
Length = 1570
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 109/290 (37%), Gaps = 46/290 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D++ D
Sbjct: 592 CPHHPNSNHAAKDCFVYKQFAEQYT-----KTTRKNSDEEQSTSKKKEDGDPPAGFQDHR 646
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A V+ D + + +K
Sbjct: 647 KELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETAIKFDH 694
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 695 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 754
Query: 173 PLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVV 216
P +G G+ G + F V + Y+AILGR + K V
Sbjct: 755 PFLGVIPGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAV 814
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRNQPWK 266
P + ++ G+ + D TC K++ E+ T WK
Sbjct: 815 PHYTYMIMKMPGPRGVSSLRSDIKQAVTC-----DKESCEMAQTHIFAWK 859
>gi|50300537|gb|AAT73678.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1992
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ ++ + K K P + Q+ KKD +
Sbjct: 649 CPHHPNSNHVAKDCFVYKQFADQ---------YTKTTRKNPDEEQSTSRKKDDGDTPAGF 699
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A V+ D+ + + +
Sbjct: 700 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDMPQYLRWSEIAI 747
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 748 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 807
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 808 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 867
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 868 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 917
>gi|147861638|emb|CAN79297.1| hypothetical protein VITISV_021646 [Vitis vinifera]
Length = 548
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 40/131 (30%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNIL 152
PE S+ +D E++F D I H L++S+ I + VR IL+D GSSV++L
Sbjct: 403 PELISRSMRSID--GEITFPLVDSNRILQSHRGDLILSLGISDFDVRWILVDLGSSVDLL 460
Query: 153 DDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHK 212
F +V+ SP+NAILGR W+H
Sbjct: 461 Q--------------------------------------FSIVEDLSPFNAILGRTWLHN 482
Query: 213 MRVVPSTYHQV 223
M++ P TYHQ+
Sbjct: 483 MKITPFTYHQM 493
>gi|108709708|gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
+D + + PH D LVIS +I VRRIL+D GSS +++ KM L + P
Sbjct: 362 EDAEGVTFPHQDPLVISAEIAGFEVRRILVDGGSSTDVIFAEAYAKMGLTTQALTPAPTS 421
Query: 174 LIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPS 218
L GF G IV + G + F VV YNAI GR ++K V+
Sbjct: 422 LRGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNKFEVI-- 479
Query: 219 TYHQVL 224
++H L
Sbjct: 480 SHHNYL 485
>gi|32487629|emb|CAE04075.1| OSJNBb0032D24.5 [Oryza sativa Japonica Group]
Length = 1355
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 111/288 (38%), Gaps = 46/288 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED----------------KQPQNQ 44
C +HN H+T DC+ ++ I+ K Q + + + +D + Q
Sbjct: 200 CKWHNSGSHFTNDCKIFRQQIQRTYGKQQQERYFEEDDGGFDPHWDCEFFRFCWNEDQEI 259
Query: 45 NNFLKKDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVY---------------CKKRE 89
N+ LKK + S Q T + K ++V K+
Sbjct: 260 NHQLKKTKPRQEWSVKNQAATTDEVKADEAKRLAKWKSVVTALVNMVFTLLAEFGAKQAN 319
Query: 90 IEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSV 149
++ EE S + V L ++ V P+ ++ H L I+ + + ++++D G++V
Sbjct: 320 VDEVEEASARLV-LSLEQAVFEKPEG---TENRHLKPLYINGYVNGKPLSKMIVDGGAAV 375
Query: 150 NILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKAT 198
N++ AT K+ D + L F G + + G L T F V+
Sbjct: 376 NLMPYATFRKLGRSSDDLIKTNMVLKDFGGNQSETKGVLNVELTVGSKTVPTTFFVIDGK 435
Query: 199 SPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
Y+ +LGR WIH +PST Q L IE + D++ A
Sbjct: 436 GSYSLLLGRDWIHANCCIPSTMQQCLIQWQGDKIEIVPADRSVNIASA 483
>gi|147816367|emb|CAN70767.1| hypothetical protein VITISV_017696 [Vitis vinifera]
Length = 1801
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL L S H L I + V +L+DNGS++N+ T +R
Sbjct: 558 DRATCIVFSDDDLPLEGSNHVRPLFIDVACLGHRVPSVLLDNGSALNVCPLVTTIALRFS 617
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHK 212
D +P Q + + G G+L T F V++ S +N +LGR WIH+
Sbjct: 618 PDDFRPSTQTVRAYDGTQRTVMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHE 677
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 678 AGAIPSSLHQ 687
>gi|440577271|emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
Length = 2097
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 20/213 (9%)
Query: 50 KDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEV 109
KD E +P+ VN I R++ +RE+ E + + +
Sbjct: 835 KDGDEMEYQDPQHTVNMIFGG---SSSYESRRHLKAMEREVNLVESLTVIKHSKWSDTAI 891
Query: 110 SFLPQDLKLIQS-PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
SF D + + P +V+ I NC V R+L+D GSS+NIL +E+M++ K+K
Sbjct: 892 SFSKDDCPIPSTRPGRFPIVVEPTINNCQVNRVLVDGGSSLNILFVRALEEMQIPMSKVK 951
Query: 169 PFE------------QPLIGFSGIVTYSD-GSLLTD---FLVVKATSPYNAILGRQWIHK 212
P + +P+ S VT+ + T+ F VV S YN ILGR + K
Sbjct: 952 PVKYAFHSIVPGSTAKPIGQVSLPVTFGKPDNFRTERIPFDVVNFESAYNGILGRPALAK 1011
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ +Q L G+ I GDQ C
Sbjct: 1012 FLIATHYGYQSLKMPGPKGVITIRGDQKMAYVC 1044
>gi|224097044|ref|XP_002334646.1| predicted protein [Populus trichocarpa]
gi|222873876|gb|EEF11007.1| predicted protein [Populus trichocarpa]
Length = 572
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF +D L ++ +L I + ++ RIL+D+GS+VNIL T++++ + D+
Sbjct: 408 TEISFNNEDSLLGSKLYNQSLFIKGYVDEKMMNRILVDDGSAVNILPLKTMKELGIPIDE 467
Query: 167 IKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+ F + + + D F V+ A + YN +LGR WIH+ ++ ST HQ Y
Sbjct: 468 L--FSRKI---RLAIHMEDMKFNAFFHVIDAKTTYNMLLGRPWIHENGIISSTLHQCFKY 522
>gi|116311116|emb|CAH68043.1| OSIGBa0139N19-OSIGBa0137L10.12 [Oryza sativa Indica Group]
Length = 1650
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF +D + + PH D LVIS + VRRIL+ GSS +++ KM L +
Sbjct: 526 ISFGSEDAEGVMFPHQDPLVISAERAGFEVRRILVGRGSSADVIFAEAYAKMGLPTQALT 585
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 586 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAIFGRATLNKF 645
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQPWKK 267
+ + L + G+ + G Q + AS G + NRE+ + +P+ +
Sbjct: 646 EAISHHNYLKLKMPGLTGVIVVKGLQP---SAASKGDLAIINREVHNVEAEPYDR 697
>gi|147859709|emb|CAN78889.1| hypothetical protein VITISV_029416 [Vitis vinifera]
Length = 286
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 51/229 (22%)
Query: 9 HYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIVNTIM 68
H T C+ + +++ I G LK++V TS P+ +++ I
Sbjct: 67 HITEQCKNMHYLVQDFIKAGHLKQYVY---------------------TSAPKAVIDYIY 105
Query: 69 A-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDAL 127
P+ + H ++R + + +C+ V S L + ++DAL
Sbjct: 106 GGPVDDKYHFKRQRQRLVRVASVRG------ECISFSVHS--------LTKVDPTYEDAL 151
Query: 128 VISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF--SGIVTYSD 185
V+ + + N V RILI+ SS+N+L + +M ++ + LI F + IV+ D
Sbjct: 152 VLKVGVDNFDVHRILINPRSSINLLQMSAYRQMGYSSSTLENPGRILISFNKASIVSIGD 211
Query: 186 ---------GSLLTDFLVVKATSPYNAILG--RQ--WIHKMRVVPSTYH 221
+L FLVV S YNAI+G RQ +H VV YH
Sbjct: 212 VVLPVQVGPVTLNVYFLVVDDLSSYNAIMGHVRQVDLLHNQLVVRQCYH 260
>gi|32488767|emb|CAE04320.1| OSJNBb0016D16.11 [Oryza sativa Japonica Group]
Length = 1748
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPVGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + K+KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSKLKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVTDFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|77552232|gb|ABA95029.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC KK+ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKKFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|224139508|ref|XP_002323146.1| predicted protein [Populus trichocarpa]
gi|222867776|gb|EEF04907.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+E+SF ++L L H+ I + +V RIL+D+GS++NIL T++++ + D+
Sbjct: 609 TEISFNDENLLLGSKLHNRLSFIKGYVDEKMVNRILMDDGSAINILPLKTMKELGIPMDE 668
Query: 167 IKPFEQPLIGFSG-----------IVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRV 215
+ P + G + + D F V+ + YN +LGR WIH+ +
Sbjct: 669 LFPRHLMIQGLNQEGQNAIGKIRLAIHMEDMKFNALFHVIDVKTTYNMLLGRPWIHENGI 728
Query: 216 VPSTYHQVLCY 226
+ ST HQ Y
Sbjct: 729 ISSTLHQCFKY 739
>gi|32487832|emb|CAE05063.1| OSJNBa0094P09.2 [Oryza sativa Japonica Group]
gi|39546270|emb|CAD39817.3| OSJNBa0079F16.18 [Oryza sativa Japonica Group]
Length = 1802
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G ++ F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQIILPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|242092320|ref|XP_002436650.1| hypothetical protein SORBIDRAFT_10g006610 [Sorghum bicolor]
gi|241914873|gb|EER88017.1| hypothetical protein SORBIDRAFT_10g006610 [Sorghum bicolor]
Length = 303
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 108 EVSFLPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
E+SF +D I P L++ I N R+L+D GSS++IL ++ +++ +
Sbjct: 99 EISFNRKDQWAAIPEPGRFPLILDPCINNIRFVRVLVDGGSSIDILFRNSLPALKISPAQ 158
Query: 167 IKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+KP++ F G++ G +F+V Y+AILGR + K VP + VL
Sbjct: 159 LKPYDA---QFWGVLP---GQKFVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKM 212
Query: 227 QTIYGIEEIGGDQATTRTC 245
T G+ + G+ T TC
Sbjct: 213 PTEKGVLTVRGNVYTAYTC 231
>gi|108709636|gb|ABF97431.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 795
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 39/232 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLK--KDQIENSTS 58
C+ HN RH DCR++K E + K + E K P N K + QI T
Sbjct: 262 CSVHNTYRHSLADCRSVKNLAERFRKADEKKRQSRWEGKAPATPANDCKDLEFQIHQGT- 320
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAP---------EEFSKKCVKLDVQSEV 109
V T+ H ++ +RE+ A +S+ + D
Sbjct: 321 -----VATLDGGGGACAHSSRH-GFKAMRRELLATVPTHEPARKAHWSEVKLTFDQSDHP 374
Query: 110 SFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+ L + KL ALV+S I N ++R+L+D G+S++I+ A + ++ K++P
Sbjct: 375 TVLARGGKL-------ALVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQP 427
Query: 170 ----------FEQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGR 207
PL VT+ D + DF VV PYNA+LGR
Sbjct: 428 SLPIISVTPGHTWPLGHVELSVTFGDSTNFRTERIDFDVVDLNLPYNAVLGR 479
>gi|38346966|emb|CAE02263.2| OSJNBb0049I21.2 [Oryza sativa Japonica Group]
Length = 1843
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 662 CPHHPNSNHVAKDCFVYKQFAEQYT-----KPTRKNSDEE---QSTSRKKDDGDTPAGFQ 713
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 714 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 761
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 762 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 821
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 822 SNTPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 881
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ + G+ + D TC Q RE+ S R
Sbjct: 882 MAVPHYTYMMMKMPGLRGVLTLRSDIKQAVTCDKESCDMAQTREIASAR 930
>gi|147854945|emb|CAN82409.1| hypothetical protein VITISV_023301 [Vitis vinifera]
Length = 985
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+L F VV+ SP+N ILGR W+H M+ +PSTYHQ++ + T G ++ G Q R C
Sbjct: 39 TLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNDGQIDLYGSQLAARQC 97
>gi|28269476|gb|AAO38019.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 761
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 85/221 (38%), Gaps = 51/221 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C+ HN RH DCR++K E + K + E K P N ++ T EP
Sbjct: 262 CSVHNTYRHSLADCRSVKNLAERFRKADEKKRQSRWEGKAPATPANDWRELLATVPTHEP 321
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ + +S+ + D + L + KL
Sbjct: 322 ARKAH------------------------------WSEVKLTFDQSDHPTVLARGGKL-- 349
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP----------F 170
ALV+S I N ++R+L+D G+S++I+ A + ++ K++P
Sbjct: 350 -----ALVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQPSLPIISVTPGH 404
Query: 171 EQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGR 207
PL VT+ D + DF VV PYNA+LGR
Sbjct: 405 TWPLGHVELSVTFGDSTNFRTERIDFDVVDLNLPYNAVLGR 445
>gi|147833610|emb|CAN61770.1| hypothetical protein VITISV_041898 [Vitis vinifera]
Length = 530
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVK--VEDKQPQNQNNFLKKDQIENSTS 58
C FH + H CR+L+ +E+LI G LK++++ E K +N + +
Sbjct: 275 CVFHKEHGHTIETCRSLQYLVEKLIKAGHLKQYLRSNTERKITSQHHN----PGAPKAPA 330
Query: 59 EPEQIVNTI-MAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL------DVQSEVSF 111
+ ++N I P E ++R + I E + L + + F
Sbjct: 331 ASKAVINYINGGPSDEEYESRRKRQKLLRAASIR--ERINSIRPGLTGGGPRPIDGTIIF 388
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P D PH DAL++S++IG+ VRRIL+D SS +++ + V M + E
Sbjct: 389 PPVDPTRTLEPHRDALILSLEIGDFDVRRILVDPSSSADLVQASVVAHM---GHNLMGLE 445
Query: 172 QP---LIGFSGIVTYSDGSLL 189
P L GF+G T S G ++
Sbjct: 446 NPGRILSGFNGSSTTSLGDII 466
>gi|19881674|gb|AAM01075.1|AC092748_13 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
Length = 818
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I V RIL+D GSS +++ KMRL +
Sbjct: 538 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVLRILVDGGSSADVIFAEAYAKMRLPTQALT 597
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
P L F + +L D V+ YNAI GR ++K + + L
Sbjct: 598 PAPASLRAFGSGENRREEQILFD--VIDIPYNYNAIFGRATLNKFEAISHHNYLKLKMPG 655
Query: 229 IYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQPWKK 267
G+ + G Q + AS G + NR + S +P ++
Sbjct: 656 PKGVIVVKGLQPSA---ASKGNLAIINRVVHSVETEPHER 692
>gi|22128689|gb|AAM92802.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 2017
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDTLAGFQDHR 715
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 716 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 763
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 764 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 823
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 824 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 883
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 884 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|50540733|gb|AAT77889.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710909|gb|ABF98704.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1851
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 51/262 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 475 CTVHNTSLHDLADCRVVKSLAERTRKWEEEKRHERCEGKTPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREI--EAPEEFSKKCVKLDV 105
PE V TI H ++ R++ KRE+ AP + + V+
Sbjct: 535 IDDGDDDLGFQEPEATVATIDGGAC--AHASR-RSLKAMKRELLAAAPTHEATRRVRW-- 589
Query: 106 QSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATV 157
SEV+ L Q+ H A+V+S + N + R+LID G+++NIL A
Sbjct: 590 -SEVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAF 643
Query: 158 EKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYN 202
+ ++ ++P QP+IG + T+ G + DF V + PYN
Sbjct: 644 DAIKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTEQVDFDVADLSMPYN 702
Query: 203 AILGRQWIHK-MRVVPSTYHQV 223
A+LGR + K M VV Y Q+
Sbjct: 703 AVLGRPALVKFMAVVHYAYLQM 724
>gi|357513687|ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula]
gi|355521154|gb|AET01608.1| Coatomer subunit zeta-3 [Medicago truncatula]
Length = 1280
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 111 FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
F ++L + H+ AL IS+ + L+ +L+D GSS+N++ T++++ ++
Sbjct: 796 FSEEELPEVGKGHNLALHISVNCKSDLISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 855
Query: 171 EQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPST 219
+ F G +T + L F V+ + Y+ +LGR WIH V ST
Sbjct: 856 TFLVKAFDGSRKNVLGEIDLPITIGPENFLITFQVMDINASYSCLLGRPWIHDAGAVTST 915
Query: 220 YHQVLCY------QTIYGIEEIGGDQATTRTCASNGMGKQNRELGST 260
HQ L + TI+G E Q T+ +C G + G T
Sbjct: 916 LHQKLKFIRNGKLVTIHGEEAYLVSQLTSFSCIEAGSAEGTAFQGLT 962
>gi|147773282|emb|CAN69296.1| hypothetical protein VITISV_019593 [Vitis vinifera]
Length = 446
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 179 GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
G+VT L F VV+ SP+N ILGR W+H M+V+P TYHQ++ + T G ++ G
Sbjct: 384 GLVT-----LNVQFSVVQYLSPFNIILGRTWLHYMKVIPFTYHQMVSFLTKDGQVDLYGS 438
Query: 239 QATTRTC 245
Q R C
Sbjct: 439 QLAARQC 445
>gi|110288733|gb|AAP52499.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDTLAGFQDHR 715
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 716 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 763
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 764 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 823
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 824 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 883
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 884 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|38346013|emb|CAE03952.2| OSJNBb0085H11.1 [Oryza sativa Japonica Group]
Length = 1605
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF +D + + PH D LVIS + VRRIL+ GSS +++ KM L +
Sbjct: 481 ISFGSEDAEGVMFPHQDPLVISAERAGFEVRRILVGRGSSADVIFAEAYAKMGLPTQALT 540
Query: 169 PFEQPLIGFSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P L GF G G L F VV YNAI GR ++K
Sbjct: 541 PAPASLRGFGGEAVQVLGQALLLIALGSGENRREEQVLFDVVDIPYNYNAIFGRATLNKF 600
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQPWKK 267
+ + L + G+ + G Q + AS G + NRE+ + +P+ +
Sbjct: 601 EAISHHNYLKLKMPGLTGVIVVKGLQP---SAASKGDLAIINREVHNVEAEPYDR 652
>gi|52353533|gb|AAU44099.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1645
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 38/226 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T R +++ + ++++ E + Q +Q +++
Sbjct: 572 CAFHGRSSHTTEQWRNIRQRGN--VQDPRMQQGAAAEATREVAQEQVPPAEQRQDAQRRV 629
Query: 61 EQIVNTIMAPLPLEVHMTKE--RNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
Q++ P+ L K R V+ E ++ + ++ F P+D +
Sbjct: 630 IQVITRADPPIQLSKRQKKMQLRTVHNITSAGEGAPQY--------LNQQIFFGPEDAEG 681
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH D LVIS +I VRRIL+D GSS N++ KM E+ +
Sbjct: 682 VMFPHHDPLVISAEIAGFEVRRILVDGGSSANVIFAEAYAKMGREEQVL----------- 730
Query: 179 GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F VV YNAI GR ++K + ++H L
Sbjct: 731 -------------FDVVDIPYNYNAIFGRATLNKFEAI--SHHNYL 761
>gi|77555382|gb|ABA98178.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1271
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|224091749|ref|XP_002309340.1| predicted protein [Populus trichocarpa]
gi|222855316|gb|EEE92863.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRR------ILIDNGSSVNILDDATV 157
D QSE S L + P+ AL+ I I + R +L+D+G++VNIL +
Sbjct: 167 DKQSESS-----LDEVACPNKTALLEEIPIPRGIRRNQPGNVWVLVDDGTTVNILFAEVM 221
Query: 158 EKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLT---------------DFLVVKATSPYN 202
+M + K+ P + L+G G G+L F+V+ YN
Sbjct: 222 VQMGIPSSKLTPVKTFLVGIEGPGVLVKGALKLPIVMGTSSKCVLLQQSFMVIYMALAYN 281
Query: 203 AILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGM-GKQNR 255
AILGR +H++ + ST + L + T G + GDQ +R A+ + GK+ R
Sbjct: 282 AILGRPLLHQINAIISTRYLALKFPTQKG-ATVSGDQTISRQFATTCLKGKKER 334
>gi|21741600|emb|CAD39716.1| OSJNBa0052P16.15 [Oryza sativa Japonica Group]
Length = 858
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 45/252 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVED-KQPQNQNNFLKKDQIENSTSE 59
C +HN H T DC+ ++ I I G+ +K +D K+P +K D S+S
Sbjct: 474 CKWHNSGSHSTNDCKVFRQQIHAAIEGGK----IKFDDSKKP------MKADGSMTSSSR 523
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ I+ M L L ++ + K R FL ++ +
Sbjct: 524 -KSIMKKTMVVLILIGAVSFSDSAGMKSRR---------------------FL-RNHRGT 560
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
++ H L I+ + + +++D G++VN++ AT K+ + + L F G
Sbjct: 561 ENRHLKPLYINGFVNGKPMSNMMVDGGATVNLMPYATFRKLGRNAEDLSKTNMVLKDFGG 620
Query: 180 IVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
+ + G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 621 NPSETKGVLNVELTVGSKTIPTTFFVIDGKGCYSLLLGRDWIHANCCIPSTMHQCLIQWE 680
Query: 229 IYGIEEIGGDQA 240
IE + D++
Sbjct: 681 GNKIEIVPADRS 692
>gi|407731641|gb|AFU25704.1| gag-pol precursor [Castanea mollissima]
Length = 428
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +H D H T DCRTL+ ++ +L G++ F+ D Q Q + N+
Sbjct: 270 CHYHQDKGHTTEDCRTLRDHLNQLAKAGKINHFLARPDGQVGQQG---MQMYWGNTPQLA 326
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSK--KCVKLDVQSEVSFLPQDLKL 118
+N I+A L V E + EE ++ K ++ V + F +D +
Sbjct: 327 LGTINVILAQLRRAVGDPSRVMSVQNGFENKVMEENNQLVKRIRFLVTPVLGFSDKDKEG 386
Query: 119 IQSPHDDALVISIKIGNCLVRRILI-DNGSSVNIL 152
P DDALV++I IG VRR+L+ D+GS V ++
Sbjct: 387 TYQPLDDALVVTICIGGYDVRRVLVDDDGSGVEMM 421
>gi|147766002|emb|CAN76933.1| hypothetical protein VITISV_024663 [Vitis vinifera]
Length = 1211
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T CR L +E LI G LK++ L+ D E
Sbjct: 1057 CAFHKEHGHTTETCRCLHYLVERLIKAGHLKQY--------------LRSDAGET----- 1097
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
++V + T+ N P + + F P D I
Sbjct: 1098 -KVVAGRVG--------TRAFNSIRPGITGGGPRA---------IDGTIIFPPVDPTRIL 1139
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG+ VRRIL+D SS +++ + V M ++ + L GF+G
Sbjct: 1140 QPHHDALIMSLEIGDFNVRRILVDPSSSADLVQASVVSHMGHSLIGLENPGRILSGFNGS 1199
Query: 181 VTYSDGSLL 189
T S G ++
Sbjct: 1200 STTSLGDII 1208
>gi|147858080|emb|CAN81814.1| hypothetical protein VITISV_036990 [Vitis vinifera]
Length = 528
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 14/160 (8%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH D H T CR + +E LI G LK++++ P N+ +
Sbjct: 266 CTFHKDHGHTTETCRAFQYLVERLIKAGHLKQYLR-----PDNEGRDTSQHHNPGPLGPQ 320
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
L L +ER + R + + + F P D
Sbjct: 321 PPPRPRKRQKL-LRAASIRERINSIRPRLMRGGPR--------PIDGTIIFPPVDPTRTL 371
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
PH DAL++S++IG+ VR IL+D GSS +++ + V M
Sbjct: 372 QPHRDALILSLEIGDFDVRCILVDPGSSADLVQASVVGHM 411
>gi|78708235|gb|ABB47210.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKLPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|224117414|ref|XP_002331706.1| predicted protein [Populus trichocarpa]
gi|222874312|gb|EEF11443.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D + I+ PH+DALVIS + V +IL+DN SSVNIL + KM ++ ++
Sbjct: 234 ITFTPTDGQRIEYPHEDALVISPVMEGHRVYKILMDNDSSVNILSTEAMMKMGIDASRMT 293
Query: 169 PFEQPLIGF 177
P P IG
Sbjct: 294 PVPTPFIGI 302
>gi|77554306|gb|ABA97102.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|77553887|gb|ABA96683.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1844
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|51854356|gb|AAU10736.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353374|gb|AAU43942.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1995
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ ++ + K K + Q+ +KKD +
Sbjct: 659 CPHHPNSNHVAKDCFVYKQFADQ---------YTKTTRKNSDEEQSTSMKKDDGDTPAGF 709
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 710 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 757
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 758 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 817
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 818 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPTLAK 877
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 878 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASVR 927
>gi|77555386|gb|ABA98182.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1940
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|357498509|ref|XP_003619543.1| hypothetical protein MTR_6g057800 [Medicago truncatula]
gi|355494558|gb|AES75761.1| hypothetical protein MTR_6g057800 [Medicago truncatula]
Length = 155
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I K+ + ++L+D G++VN++ + ++ + +KP L + G
Sbjct: 41 HLKTLFIQAKVDEIGINKVLVDGGAAVNLMPQSLLKMIGKTDKDLKPHNVILSNYEGKDG 100
Query: 183 YSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+S G+L T F+VV + + +N +LGR+WIH + +VPS+ HQ
Sbjct: 101 HSLGALQVSLTVGTVVRPTLFMVVPSKANFNLLLGREWIHGIGIVPSSMHQ 151
>gi|116309190|emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group]
Length = 1987
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTSE 59
C H + H +DC K++ ++ + K K + Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFIYKQFADQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 707
Query: 60 PE---QIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ ++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 708 QDLRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 755
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 756 KFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 815
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 816 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 875
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREE 927
>gi|18071370|gb|AAL58229.1|AC084762_3 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 2026
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPVGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|19881590|gb|AAM00991.1|AC090482_20 Putative retroelement [Oryza sativa Japonica Group]
Length = 2017
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKLPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|40882693|gb|AAR96234.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708469|gb|ABF96264.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2004
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPVGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|147766542|emb|CAN69696.1| hypothetical protein VITISV_012964 [Vitis vinifera]
Length = 538
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 174 LIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G +L F VV+ SP+N ILGR W+H M+ + STYHQ
Sbjct: 431 LSGFNGSSTTSLGDIVLPVQAGPITLNVQFSVVQDLSPFNVILGRTWLHYMKTISSTYHQ 490
Query: 223 VLCYQTIYGIEEIGGDQATTRTC 245
++ + T G + G Q R C
Sbjct: 491 MVSFLTKDGQVNLYGSQLAARQC 513
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE 37
C FH + H T CR L+ +E LI G LK++++++
Sbjct: 266 CVFHKEYSHTTETCRCLQYLVERLIKAGHLKQYLRLD 302
>gi|147819827|emb|CAN67305.1| hypothetical protein VITISV_031130 [Vitis vinifera]
Length = 392
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDF----------- 192
++ SS N+L ++M +K L GF+G T S G ++
Sbjct: 169 ESCSSANLLQMLAYKQMDHLTSTLKNPGXLLFGFNGDTTTSLGDVMLPIQADLVTLSMRX 228
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
LVV S YNAI+GR W+HKM+V+P TYHQ+L
Sbjct: 229 LVVDDLSXYNAIMGRAWLHKMKVIPYTYHQML 260
>gi|38344177|emb|CAE03508.2| OSJNBa0053K19.16 [Oryza sativa Japonica Group]
Length = 2010
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C+ H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 654 CSHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 705
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 706 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 753
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ ++KP
Sbjct: 754 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPHSELKP 813
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 814 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 873
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 874 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 922
>gi|38344628|emb|CAE02527.2| OSJNBb0003A12.14 [Oryza sativa Japonica Group]
Length = 1863
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTSE 59
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 642 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 692
Query: 60 PE---QIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ ++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 693 QDHRTELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 740
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 741 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 800
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 801 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 860
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 861 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 910
>gi|5902444|dbj|BAA84457.1| GAG-POL precursor [Oryza sativa Japonica Group]
Length = 983
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 112/289 (38%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 662 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 713
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A V+ D + + +K
Sbjct: 714 DHRKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPHYLRWSEIAIK 761
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 762 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 821
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 822 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 881
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 882 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 930
>gi|116309081|emb|CAH66189.1| OSIGBa0144J05.1 [Oryza sativa Indica Group]
Length = 1601
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 643 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 694
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 695 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 742
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 743 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 802
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 803 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 862
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 863 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 911
>gi|15217240|gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Japonica Group]
Length = 1705
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF D + + PH D LVIS +I VRRIL+D SS +++ KM L I
Sbjct: 639 QISFGLGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGESSADVIFAEAYAKMGLTTQAI 698
Query: 168 KPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHK 212
P L GF G +V + G + F VV YNAI GR ++K
Sbjct: 699 TPAPALLRGFGGEAVQVLGQAQLMVAFGTGENRREEQVLFDVVDIPYNYNAIFGRATLNK 758
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG--MGKQNRE 256
+ ++H L + I I D A S G MG++ E
Sbjct: 759 FEAI--SHHNYLKLKMPGPIGVIMIDDADPTKLVSLGGDMGEEEAE 802
>gi|46391121|gb|AAS90648.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46485807|gb|AAS98432.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2000
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFIYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 708
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 709 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 756
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 816
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 817 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVANFETAYHAILGRPALAKF 876
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 877 MAVPHYTYMMMKMSGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 925
>gi|77554274|gb|ABA97070.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1988
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 654 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 705
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 706 DHRKELNHIFGGPLAYE----SKRKKKLTEREINAVQPDTPQYLRW---SEIA-----IK 753
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 754 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 813
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 814 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 873
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 874 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 922
>gi|357488751|ref|XP_003614663.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355515998|gb|AES97621.1| F-box/kelch-repeat protein [Medicago truncatula]
Length = 1043
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H+ AL IS+ + ++ +L+D GSS+N++ +T++++ ++ + F G
Sbjct: 788 HNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRSTFLVKAFDGTRK 847
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ---- 227
+T + L F V+ + Y+ +LGR WIH V ST HQ L +
Sbjct: 848 SVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGK 907
Query: 228 --TIYGIEEIGGDQATTRTCASNGMGKQNRELGST 260
TI+G E Q ++ +C G + G T
Sbjct: 908 LVTIHGEEAYLVSQLSSFSCIEAGSAEGTAFQGLT 942
>gi|147833067|emb|CAN66355.1| hypothetical protein VITISV_004959 [Vitis vinifera]
Length = 500
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH D CR+L+ +E LI G LK+ V K N N D+ +S +
Sbjct: 266 CAFHKDHGXXXETCRSLQYLVERLIKAGHLKQ-APVAPKAVINYINGGPSDEEYDSRRKX 324
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
++++ + + N E P + + F P D
Sbjct: 325 QKLLRA--------ASIXERINSIRPGLTGEGPRX---------IDGTIIFPPVDPTRTL 367
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
PH DAL++S++IG VRRIL+D SS +++ + M ++ + L GF+G
Sbjct: 368 XPHRDALILSLEIGXFDVRRILVDPDSSADLVQALVIGHMGHSLAGLENPGRILSGFNGS 427
Query: 181 VTYSDGSLL 189
T S G ++
Sbjct: 428 STTSLGDII 436
>gi|21741950|emb|CAD40441.1| OSJNBa0035B13.14 [Oryza sativa Japonica Group]
Length = 1736
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 562 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 613
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 614 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 661
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 662 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 721
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 722 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 781
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 782 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 830
>gi|21672041|gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1844
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG----------- 186
V R+L+D ++VN++ + + + E D++K L GF+G T + G
Sbjct: 1013 VSRMLVDGDAAVNLMPYSLFKMLGREDDELKKTNMILNGFNGEPTEAKGIFSAELTVGNK 1072
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+L T F +V YN ILGR WIH VPST HQ L
Sbjct: 1073 TLPTAFFIVNVQGNYNVILGRCWIHANCCVPSTLHQCL 1110
>gi|108710870|gb|ABF98665.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 793
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 33/245 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLK--------KDQ 52
C+ HN +H DCR++K +E K K + E K P N + D
Sbjct: 365 CSVHNTYQHSLADCRSVKNLVERF-RKADEKRQNRREGKAPATPANDWRGEAKKKAPADD 423
Query: 53 IENSTSEPEQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSF 111
++S QI +A L E T R + E+ A + K + SEV
Sbjct: 424 GDDSEDLEFQIPQGTVATLDREACAHTSRRGFKVTRCELLAAVP-THKAARKARWSEVK- 481
Query: 112 LPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
L QS H ALV+S I N ++R+L+D +S++I+ A + ++
Sbjct: 482 ----LTFDQSDHPTMLARGGKLALVVSPTIHNVKMKRVLVDGEASLSIISPAAFDALKAP 537
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
K++P P+IG VT+ D + DF V PYN +LGR + ++ + +T
Sbjct: 538 GMKLQP-SLPIIGLP--VTFGDSTNFCTERIDFDVADLNLPYNVVLGRPAL--VKFMAAT 592
Query: 220 YHQVL 224
++ L
Sbjct: 593 HYAYL 597
>gi|147778604|emb|CAN67043.1| hypothetical protein VITISV_037622 [Vitis vinifera]
Length = 90
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF G+ T S G ++ F VV+ SP+NAILGR W+H M+ +PSTYHQ
Sbjct: 15 LSGFKGMATTSLGDIVLPVQEGPVTLNVQFSVVQDLSPFNAILGRTWLHYMKAIPSTYHQ 74
Query: 223 VLCYQT 228
++ + T
Sbjct: 75 MVSFLT 80
>gi|19881548|gb|AAM00949.1|AC021892_13 Putative retroelement [Oryza sativa Japonica Group]
gi|31431082|gb|AAP52913.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1945
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 607 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 661
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 662 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 709
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 710 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 769
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 770 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 829
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 830 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 875
>gi|77554831|gb|ABA97627.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2010
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 654 CPHHPNSNHMAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 708
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 709 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 756
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 816
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 817 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 876
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 877 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 922
>gi|32488502|emb|CAE03254.1| OSJNBa0011J08.9 [Oryza sativa Japonica Group]
Length = 878
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 48/245 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q KKD +++ +
Sbjct: 642 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNARKPSDG---DQGTSKKKDDEDDAPTGF 693
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R KREI A + + + ++ SE++ +
Sbjct: 694 QDHRKELNHIFGGPLTYE----SKRKQKLTKREINAVQPNTPQYLRW---SEIA-----I 741
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 742 KFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 801
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 802 PSNAPFHGVIPGLSATPLGQITIPVTFGTRENFRTENICFEVADFETAYHAILGRPALAK 861
Query: 213 MRVVP 217
VP
Sbjct: 862 FMAVP 866
>gi|38347303|emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa Japonica Group]
Length = 1950
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 594 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 645
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 646 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 693
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 694 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 753
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 754 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 813
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 814 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 862
>gi|38346188|emb|CAD39529.2| OSJNBa0027O01.4 [Oryza sativa Japonica Group]
Length = 2013
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 708
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 709 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 756
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 816
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 817 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 876
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 877 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 925
>gi|77556423|gb|ABA99219.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2360
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 114/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 2039 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 2089
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 2090 QDHRKELNHIFSGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 2137
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 2138 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 2197
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 2198 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETTYHAILGRPALAK 2257
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + + G+ + D TC Q RE+ S R
Sbjct: 2258 FMAVPHYTYMMTKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 2307
>gi|77555778|gb|ABA98574.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1984
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ K K D++ D
Sbjct: 639 CPHHPNSNHVAKDCFVYKQFADQYT-----KTTWKNSDEEQSTSRKKDDGDAPAGFQDHR 693
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 694 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 741
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 742 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 801
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 802 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 861
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 862 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 907
>gi|108864539|gb|ABA94416.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1714
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 107/275 (38%), Gaps = 53/275 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFV-KVEDKQPQNQNNFLKKDQIENST 57
C H RH DC KK +E+ I+ KG+ V K E+ P E+ +
Sbjct: 627 CPIHKTDRHSLEDCLVFKKSLEKHIAFEKGKRVRVVEKNEEAVPH-----------ESDS 675
Query: 58 SEPEQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPE-----EFSKKCVKLD-VQSEVS 110
+ P+ L V H+ Y KRE + E + K+ + ++
Sbjct: 676 AYPD---------FDLHVSHIFGGSTPYSSKREYKKVECEVCSTWQGAAPKMKWSEQKIE 726
Query: 111 FLPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
F +D K P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P
Sbjct: 727 FSEEDHPKTAVIPGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTP 786
Query: 170 FEQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWI 210
QP F GI+ S L F V + + YNAI+GR +
Sbjct: 787 TNQP---FHGIIPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAL 843
Query: 211 HKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
K +QVL + G I G+ C
Sbjct: 844 AKFMAASHYAYQVLKMSGLKGTITIQGNAKLAVQC 878
>gi|22725926|gb|AAN04936.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1479
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 607 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 661
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 662 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 709
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 710 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 769
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 770 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 829
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 830 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 875
>gi|147804834|emb|CAN78057.1| hypothetical protein VITISV_022118 [Vitis vinifera]
Length = 1504
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ FL DL L S L I++ V +L+DNG ++N+ AT +
Sbjct: 277 IVFLDDDLPLEGSDRTHPLYITVGCSGHRVPSVLLDNGLTLNVCPLATAIALGYAPSDFD 336
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSP-----------YNAILGRQWIHKMRVVP 217
P Q + + G+L+ +FL+ T P +N +LGR WIHK+ +P
Sbjct: 337 PSTQTIRAYDNTKREVMGTLIVEFLIGPTTFPTLFQVLRIPTSFNLLLGRPWIHKVGAIP 396
Query: 218 STYHQ 222
S+ HQ
Sbjct: 397 SSLHQ 401
>gi|77553946|gb|ABA96742.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 553
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDL-KLIQSP--------------HDDALVISIKIGNCL 137
P EF K Q+EV + + L KL+ SP H L I+ +
Sbjct: 79 PAEFEAK------QAEVDGVEEALAKLVLSPEQAIFEKPGVTENRHLKPLYINGFVNGKP 132
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDG 186
+ ++++D G++VN++ AT K+ D + L F G +T
Sbjct: 133 MSKMMVDGGAAVNLMPYATFRKLGRNPDDLIKTNMVLKDFGGNPSETKRVLNVELTVGSK 192
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
++ T FLV+ Y+ +LGR WIH R +PST HQ L IE + D++ A
Sbjct: 193 TVPTTFLVIDGKGSYSLLLGRDWIHANRCIPSTMHQCLIQWQGDKIEIVPADRSVNVANA 252
>gi|108862820|gb|ABA98926.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1991
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 708
Query: 59 EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ + +N I PL E +R +REI A + + + ++ SE++ +K
Sbjct: 709 DHRKELNHIFGDPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 756
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 816
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 817 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 876
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 877 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 925
>gi|22795275|gb|AAN08247.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 1696
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 612 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 666
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 667 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 714
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 715 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 774
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 775 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 834
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 835 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 880
>gi|62734315|gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1587
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + H D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 583 ISFGPEDAEGVMFSHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMELPTQTLT 642
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 643 PAPASLRGFGGEAVQVLGQALLLIAFGSGENGREEQILFDVVDIPYNYNAIFGRATLNKF 702
Query: 214 RVVPSTYHQVL 224
V ++H L
Sbjct: 703 EAV--SHHNYL 711
>gi|108864276|gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1590
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + H D LVIS +I VRRIL+D GSS +++ KM L +
Sbjct: 583 ISFGPEDAEGVMFSHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMELPTQTLT 642
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI GR ++K
Sbjct: 643 PAPASLRGFGGEAVQVLGQALLLIAFGSGENGREEQILFDVVDIPYNYNAIFGRATLNKF 702
Query: 214 RVVPSTYHQVL 224
V ++H L
Sbjct: 703 EAV--SHHNYL 711
>gi|77555161|gb|ABA97957.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1984
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 654 CPHHPNSNHMAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 708
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 709 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 756
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 816
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 817 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 876
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 877 PHYTYMMMKMLGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 922
>gi|38346888|emb|CAE03913.2| OSJNBb0015G09.7 [Oryza sativa Japonica Group]
Length = 1991
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFIYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 708
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 709 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 756
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 816
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 817 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 876
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 877 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 925
>gi|20451040|gb|AAM22011.1|AC093178_6 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430828|gb|AAP52687.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1933
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D++ D
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEEHSTSRKKDDGDTPAGFQDHR 715
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 716 KELNHIFGGPLAYE----SKRKRKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 763
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 764 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 823
Query: 173 PLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKM 213
P F G++ + L F V + Y+AILGR + K
Sbjct: 824 P---FHGVIPGLSATPLCQITLPVTFGTRENFRTENISFEVADFETTYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|77555933|gb|ABA98729.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K DK+ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDKE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ ++
Sbjct: 708 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|19881654|gb|AAM01055.1|AC091735_28 putative pol polyprotein [Oryza sativa Japonica Group]
Length = 1508
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG----------- 186
V R+L+D ++VN++ + + + E D++K L GF+G T + G
Sbjct: 842 VSRMLVDGDAAVNLMPYSLFKMLGREDDELKKTNMILNGFNGEPTEAKGIFSAELTVGNK 901
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+L T F +V YN ILGR WIH VPST HQ L
Sbjct: 902 TLPTAFFIVNVQGNYNVILGRCWIHANCCVPSTLHQCL 939
>gi|62733846|gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550301|gb|ABA93098.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1731
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 108/286 (37%), Gaps = 47/286 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H T+DC K+ E+ + K D D +
Sbjct: 566 CPHHPNSNHATKDCFVYKQIAEQYAKNAR-----KASDGDQSASKKKDDDDDAPTGFQDH 620
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A V+ D + + +K
Sbjct: 621 RKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETTIKFD 668
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 669 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSN 728
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V PY+AILGR + K
Sbjct: 729 APFHGVIPGLSAMPLGQITLPVTFGTRENFRTENVCFEVADFEKPYHAILGRPALAKFMA 788
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ + G+ + D TC K++ E+ TR
Sbjct: 789 VPHYTYMMMKMPSPRGVISLRSDIKQAITC-----DKESCEMAQTR 829
>gi|32489861|emb|CAE04028.1| OSJNBb0068N06.4 [Oryza sativa Japonica Group]
Length = 959
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 57/298 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLK-----EFVKVEDKQ-PQNQNNFLKKDQIE 54
C +HN H T DC+ ++ I+ I G++K + +KV+ P N N + ++
Sbjct: 366 CKWHNSGSHSTNDCKVFRQQIQAAIEGGKIKFDDSNKPMKVDGNPFPVNMNQKRRVQRLR 425
Query: 55 NSTSEPEQIVNTIMAPLPLE-------VHMTKERNVYCKKREIEA--------------P 93
N ++I + + P + V E KR + P
Sbjct: 426 NREEVEQEINHRLKKTKPQQEWRVKNQVPTADEATADEAKRLAKGNSVVTASVNMVFTLP 485
Query: 94 EEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDAL--------------VISIKIGNCLVR 139
EF K +D E S KL+ SP ++ + +
Sbjct: 486 AEFGVKQADVDEVEEAS-----AKLVLSPEQAVFEKPKGTENWYLKPFYVNGYVNGKPMS 540
Query: 140 RILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SL 188
++++D G+ VN++ AT K+ + + L F G + + G ++
Sbjct: 541 KMMVDGGAVVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTI 600
Query: 189 LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
T F V+ Y+ +LGR WIH +PST +Q L + IE + D++ A
Sbjct: 601 PTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMNQCLIQWQVDKIEIVPADRSVNVASA 658
>gi|41393217|gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 680
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ M L +
Sbjct: 24 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAKAYANMGLPTHALT 83
Query: 169 PFEQPLIGFSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGR 207
P L F G G L F VV YNAI GR
Sbjct: 84 PAPASLRSFGGEAVQVLGQALLLIAFGSWENRREEQVLFDVVDIPYNYNAIFGR 137
>gi|77550802|gb|ABA93599.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1912
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K DK+ Q+ KKD +
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDKE---QSTSRKKDDGDTPAGFQ 708
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 709 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 756
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 757 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 816
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILG + K
Sbjct: 817 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALAKF 876
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 877 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 925
>gi|108706114|gb|ABF93909.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 882
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q+ KKD +++ +
Sbjct: 610 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDG---DQDTSKKKDDEDDAPTGF 661
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 662 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEMA-----I 709
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 710 KFDRSDHPDQVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 769
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 770 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAK 829
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 830 FMAVPHYTYMMMKMPGPRGVISLRSDVKQAVTC 862
>gi|32480044|emb|CAE01788.1| OSJNBa0039K24.7 [Oryza sativa Japonica Group]
Length = 1818
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ K K D++ D
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFADQYT-----KTTRKNSDEEQSTSRKKDDGDAPAGFQDHR 715
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 716 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 763
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 764 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 823
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 824 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 883
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 884 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASVR 929
>gi|77555026|gb|ABA97822.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1379
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 49/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D + Q KKD +++++
Sbjct: 465 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDGE---QGTSKKKDDEDDASTGF 516
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 517 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 564
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 565 KFDRSDHPDRVVHPGRYPLVLYLVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 624
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
P P F V + + DF + Y+AILGR + K VP + ++
Sbjct: 625 PSNAP---FHENVCFE----VADF-----ETAYHAILGRPALAKFMAVPHYTYMMMKMLG 672
Query: 229 IYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G+ + + TC K++ E+ TR
Sbjct: 673 PRGVISLRSNIKKAVTC-----DKESCEMAQTR 700
>gi|147797776|emb|CAN69610.1| hypothetical protein VITISV_024102 [Vitis vinifera]
Length = 2037
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L I + C V +L+DNGS++N+ T + D P Q + + G
Sbjct: 487 SNHVRPLFIDVACLGCRVPSVLLDNGSALNVCPLVTATALGFSPDDFGPSTQTVRAYDGT 546
Query: 181 VTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L T F V++ S +N +LGR WIH+ +PS+ HQ
Sbjct: 547 QRTIMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPWIHEAGAIPSSLHQ 599
>gi|62732811|gb|AAX94930.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550198|gb|ABA92995.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1765
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 541 CPHHPNSNHVAKDCFIYKQFAEQYVKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 592
Query: 59 -EPEQIVNTIM-APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ + +N I PL E +R +REI A + + + ++ SE++ +
Sbjct: 593 QDHRKELNHIFDGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 640
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID+GS++NIL T++ M++ + ++K
Sbjct: 641 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDSGSALNILFAKTLDDMQIPRTELK 700
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G++ G + F V + Y+AILGR + K
Sbjct: 701 PSNAPFHGVIPGLLATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAK 760
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 761 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 793
>gi|46575948|gb|AAT01309.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|51451363|gb|AAU03118.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1149
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 654 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 705
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 706 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 753
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 754 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 813
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 814 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 873
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 874 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMTSAR 922
>gi|116309752|emb|CAH66795.1| H0215F08.6 [Oryza sativa Indica Group]
Length = 1991
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ K K D++ D
Sbjct: 635 CPHHPNSNHVAKDCFIYKQFADQYT-----KTTRKNSDEEQSTSRKKDDGDAPAGFQDHR 689
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 690 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 737
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 738 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 797
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 798 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 857
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 858 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 903
>gi|41469087|gb|AAS07061.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 971
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 51/253 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H RH DC KK +E+ ++ KG+ V+ ++ P + E+ ++
Sbjct: 660 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVRVVEKNEESPPH----------ESDSA 709
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPE-------EFSKKCVKLDVQSEVSF 111
P+ ++ H+ Y KRE + E + + +K Q ++ F
Sbjct: 710 YPDSDLHV--------SHIFGGSTTYSSKREYKKVEREVCSTWQGAAPRMKWSEQ-KMEF 760
Query: 112 LPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
L D K P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P
Sbjct: 761 LDADHPKTAVIPGRYPIVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPT 820
Query: 171 EQPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIH 211
+QP F GI S L F V + + YNAI+GR
Sbjct: 821 DQP---FHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHA 877
Query: 212 KMRVVPSTYHQVL 224
K +QVL
Sbjct: 878 KFMAASHYAYQVL 890
>gi|77555338|gb|ABA98134.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1956
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFADQYT-----KTTRKNSDEE---QSTSRKKDDGDAPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 VHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|52353363|gb|AAU43931.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 927
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 708 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|77552546|gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2289
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 929 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPVGFQ 980
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 981 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 1028
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 1029 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 1088
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 1089 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 1148
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 1149 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREE 1199
>gi|34015138|gb|AAQ56335.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 638
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 37/246 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H RH DC KK + + ++ KG+ V+ + K P +++ +D S
Sbjct: 398 CPIHKSDRHSLEDCLVFKKSLAKHMASEKGKRVRMVEKDAKAPTQESDSAYQD----SDL 453
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD-LK 117
I MA + ER V C + AP+ +K Q ++ F +D K
Sbjct: 454 HVSHIFGGSMAYSSKREYKKVEREV-CSTWQGAAPK------MKWSEQ-KIEFSEEDHPK 505
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
P +++ I N V R+LID GSS+N+L +T++ M + + ++ P +QP F
Sbjct: 506 TAVIPGRYPIMVKPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQP---F 562
Query: 178 SGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPS 218
GI S L F V + + YNAI+GR + K
Sbjct: 563 HGITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASH 622
Query: 219 TYHQVL 224
+QVL
Sbjct: 623 YAYQVL 628
>gi|147775414|emb|CAN64945.1| hypothetical protein VITISV_019048 [Vitis vinifera]
Length = 1929
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L +S+ V +L+DNGS++N+ AT +
Sbjct: 554 IVFSDDDLSLEGSDHTRPLYVSVGCSGRRVPSVLLDNGSALNVCPLATAITLGYAPSNFG 613
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ V+P
Sbjct: 614 PSTQTVQAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGVIP 673
Query: 218 STYHQ 222
S+ HQ
Sbjct: 674 SSLHQ 678
>gi|108708718|gb|ABF96513.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 564
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q+ KKD +++ +
Sbjct: 292 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNARKPSDG---DQSTSKKKDDEDDAPTGF 343
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL-DVQSEVSFLPQD 115
+++ + PL E +R +REI A + + + ++ ++ + L
Sbjct: 344 QDHRKELNHIFSGPLAYE----SKRKQKLTEREINAVQPNTPQYLRWSEIAIKFDRLDHH 399
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP-- 173
+++ P LV+ + + N +RR LID+GS++NIL T++ M++ + ++KP P
Sbjct: 400 DRVVH-PGRYPLVLDLVVRNVKLRRTLIDDGSALNILFAKTLDDMQIPRTELKPSNAPFH 458
Query: 174 --LIGFSGI--------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRVVPST 219
++G S VT+ + + T+ F V + Y+AILGR + K VP
Sbjct: 459 GVILGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVPHY 518
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
+ ++ G+ + D TC
Sbjct: 519 TYMMMKMPGPRGVISLRSDIKQAVTC 544
>gi|87241233|gb|ABD33091.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 509
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 94 EEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILD 153
+ FS + + + F ++L + H+ AL IS+ + ++ +L+D GSS+N++
Sbjct: 222 DRFSGIVGNITACNNLWFSEEELPEVGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMP 281
Query: 154 DATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYN 202
T++++ ++ + F G +T + L F V+ + Y+
Sbjct: 282 KTTLDQLSYHGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYS 341
Query: 203 AILGRQWIHKMRVVPSTYHQVLCY------QTIYGIEEIGGDQATTRTCASNG 249
+LGR WIH V ST HQ L + TI+G E Q ++ +C G
Sbjct: 342 CLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEAG 394
>gi|108862668|gb|ABA98473.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 830
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 97/261 (37%), Gaps = 26/261 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C+ HN RH DCR++K E + K + E K P + +
Sbjct: 231 CSVHNTYRHSLADCRSVKNLAERFRKADEEKRQGRREGKAPATSTDTSGNRRHARRGGGG 290
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+T M +E E +S+ + D + L + KL
Sbjct: 291 GACAHTSRRGFKA---MRRELLAAVPTHEAARKARWSEVKLTFDQSDHPTVLARGGKL-- 345
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
ALV+S I N ++R+L++ +S++I+ A + ++ K++P P+IG +
Sbjct: 346 -----ALVVSPTIHNVRMKRVLVEWRASLSIISPAAFDALKAPGMKLQP-SLPIIGVTPG 399
Query: 181 VTYSDGSL---------------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
T+ G + DF V PYNA+LGR + K + +
Sbjct: 400 HTWPLGHVELPMTFGDSTNFRTERNDFDVADLNLPYNAVLGRPTLVKFMAATHYAYLQMK 459
Query: 226 YQTIYGIEEIGGDQATTRTCA 246
Q G + GD TCA
Sbjct: 460 MQGPAGPITVFGDVKVALTCA 480
>gi|147766102|emb|CAN72382.1| hypothetical protein VITISV_026665 [Vitis vinifera]
Length = 166
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 124 DDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTY 183
+D LV+++ + + V + LI++G V++L + +MR + L F+ +T
Sbjct: 65 EDTLVMTLGLDDFNVYKXLINSGHFVDLLQMSAYNQMRYSXVALXNPGCVLFRFNETITI 124
Query: 184 S--DGSLLTD--FLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
S D L + F VV+ S YNAILG+ W++KM+V+PSTYH
Sbjct: 125 SLRDXVLPLNVRFFVVEDLSXYNAILGQSWLNKMKVIPSTYH 166
>gi|53981366|gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa Japonica Group]
Length = 1279
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D + + PH D LVIS +I VRRIL+D GSS +++ KM +
Sbjct: 632 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGFPTQALT 691
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G ++ + G + F VV YNAI R ++K
Sbjct: 692 PAPASLRGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDILYNYNAIFSRATLNKF 751
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG-MGKQNRELGSTRNQPWKK 267
+ + L G+ + G Q + AS G + NR + S +P ++
Sbjct: 752 EAISHHNYLKLKMPGPAGVIVVKGLQPSA---ASKGDLAIINRAVHSVETEPHER 803
>gi|147860695|emb|CAN81448.1| hypothetical protein VITISV_011173 [Vitis vinifera]
Length = 312
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F ++ + P +DAL++++ +RRIL+D SS + D +
Sbjct: 199 ITFPLVNVNRVLQPQEDALILTLSADRFDIRRILVDPSSST-----XLLATTTSLSDIVL 253
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
P + + +L F VV S YNAI+GR W+H+M+V+P TYHQ++ Y T
Sbjct: 254 PVQADPV-----------TLNMRFSVVDNLSLYNAIMGRAWLHRMKVIPFTYHQMVSYLT 302
Query: 229 IYG 231
G
Sbjct: 303 KEG 305
>gi|110288793|gb|ABG65980.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 975
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 654 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDAPAGFQ 705
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 706 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 753
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 754 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 813
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 814 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 873
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 874 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 922
>gi|31432435|gb|AAP54065.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C + + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHYPNSNHVAKDCFVYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|77550747|gb|ABA93544.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 615
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 53/289 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + K D +D +P
Sbjct: 47 CPHHPNSNHAVKDCFVYKQFAEQYAKNAR-----KPTDGDQSTSKKKNDEDDAPTGFQDP 101
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I P+ E +R +REI A V+ D + + +K
Sbjct: 102 RKELNHIFGGPMAYE----SKRRQKLTEREINA--------VEPDTPQYLWWSETAIKFD 149
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID+GS +NIL T++ M++ ++KP
Sbjct: 150 RSDHPDRVVHPGRYPLVLDPVVRNIKLRRYLIDDGSVLNILFPKTLDDMQIPHTELKPSN 209
Query: 172 QPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIHK 212
P F G++ + L+ F V + Y+AILGR + K
Sbjct: 210 AP---FHGVIPGLSSTPLSQITLPVTFGTRENFRTENICFEVADFETAYHAILGRLALAK 266
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 267 FIAVPHYTYMMMKMPGPRGVISLWSDIKQAVTC-----DKESCEMAQTR 310
>gi|147775039|emb|CAN68244.1| hypothetical protein VITISV_023682 [Vitis vinifera]
Length = 1232
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRI---LIDNGSSVNILDDATVEKM 160
D + ++F DL S H L I + CL RR+ L+DNGS++N+ T +
Sbjct: 404 DRATCIAFCNDDLPPKGSNHVRPLFIDVA---CLGRRVSSVLLDNGSALNVCPLVTAIAL 460
Query: 161 RLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQW 209
D P Q + + G G+L T F V++ S +N +LGR W
Sbjct: 461 GFSPDDFGPSTQTVRAYDGTQRTDMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPW 520
Query: 210 IHKMRVVPSTYHQ 222
IH+ +PS+ HQ
Sbjct: 521 IHEAGAIPSSLHQ 533
>gi|108864374|gb|ABA93602.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 62/300 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ ++ + K K P + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFIYKQFADQ---------YAKSTRKNPDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKHKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATT-----RTCASNGMGK------QNRELGSTR 261
VP + + Q G ++ G +QA + R+ +S GK +NR + R
Sbjct: 880 FMAVPHYTYTIRTRQE--GRDQGGINQAVSSRLHQRSPSSRLAGKPGSSSEENRAMAHIR 937
>gi|147788769|emb|CAN65157.1| hypothetical protein VITISV_014181 [Vitis vinifera]
Length = 345
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 174 LIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
L GF+G T ++ F +V+ S +NAI+GR W+H ++V+PSTYHQ++ Y T G
Sbjct: 225 LSGFNGASTTFLRDVVLPFSMVEDLSFFNAIMGRTWLHGIKVIPSTYHQMVSYLTEDGQI 284
Query: 234 EIGGDQATT 242
+ G Q T
Sbjct: 285 NLYGSQLAT 293
>gi|110289529|gb|AAP54912.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC +++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYRQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVDDFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|77554754|gb|ABA97550.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1541
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 26/262 (9%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC +++ E+ + + +N ++ D +
Sbjct: 429 CPHHPNSNHAAKDCFVYRQFAEQYAKNARKASAGDQSTSKKKNDDD----DALTGFQDHR 484
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD-LKLI 119
+++ + PL E +R +REI A + + + ++ ++ + F D L +
Sbjct: 485 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRWS-ETTIKFDRSDHLDRV 539
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FS 178
P LV+ + N +RR LID GS++NIL T++ M++ + ++KP P G
Sbjct: 540 VHPRRYPLVLDPVVRNIKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIP 599
Query: 179 GIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
G+ G + F V + Y+AILGR + K VP + +
Sbjct: 600 GLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAVPHYTYMM 659
Query: 224 LCYQTIYGIEEIGGDQATTRTC 245
+ GI + D TC
Sbjct: 660 MKMPGPRGIISLRSDIKQAVTC 681
>gi|13876521|gb|AAK43497.1|AC020666_7 gag-pol precursor [Oryza sativa Japonica Group]
Length = 2017
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC +++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYRQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVDDFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|108712180|gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 106/276 (38%), Gaps = 55/276 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
C H H DC KK +E+ I+ + K VE + PQ + +++
Sbjct: 559 CPIHKTDIHVLEDCFVFKKSLEKHIASEKGKRVRVVEKDVEAAPQ---------ESDSAY 609
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKC-VKLDVQSEVSFLPQDL 116
+P+ V+ H+ + Y KRE + E + C L ++ + Q +
Sbjct: 610 PDPDLHVS----------HIFGDSTTYSSKREYKKVER--EVCSTWLGAAPKMKWSEQKI 657
Query: 117 KLIQSPHDDA--------LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ + H +V+ I N V R+LID GSS+N+L +T++ M + Q ++
Sbjct: 658 EFSEEDHPKTAVIPGIYPIVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELT 717
Query: 169 PFEQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQW 209
P +QP F GI S L F V + + YNAI+GR
Sbjct: 718 PTDQP---FHGITPQSSSRPLGKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTA 774
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ K +QVL G I G+ C
Sbjct: 775 LAKFMAASHYAYQVLKMPGPKGTITIQGNTKLAVQC 810
>gi|41393250|gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1403
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 106/276 (38%), Gaps = 55/276 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
C H H DC KK +E+ I+ + K VE + PQ + +++
Sbjct: 549 CPIHKTDIHVLEDCFVFKKSLEKHIASEKGKRVRVVEKDVEAAPQ---------ESDSAY 599
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKC-VKLDVQSEVSFLPQDL 116
+P+ V+ H+ + Y KRE + E + C L ++ + Q +
Sbjct: 600 PDPDLHVS----------HIFGDSTTYSSKREYKKVER--EVCSTWLGAAPKMKWSEQKI 647
Query: 117 KLIQSPHDDA--------LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ + H +V+ I N V R+LID GSS+N+L +T++ M + Q ++
Sbjct: 648 EFSEEDHPKTAVIPGIYPIVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELT 707
Query: 169 PFEQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQW 209
P +QP F GI S L F V + + YNAI+GR
Sbjct: 708 PTDQP---FHGITPQSSSRPLGKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTA 764
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ K +QVL G I G+ C
Sbjct: 765 LAKFMAASHYAYQVLKMPGPKGTITIQGNTKLAVQC 800
>gi|147779777|emb|CAN72424.1| hypothetical protein VITISV_011054 [Vitis vinifera]
Length = 295
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F +DL L PH+ L ++ I + RILID GS++NI+ T++++ + K+
Sbjct: 113 ITFNYKDLHLGSKPHNQPLFVTGYIQEQNITRILIDGGSALNIMPKTTMKRLGIAMKKLT 172
Query: 169 PFEQPLIGF--------SGI---VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ GF S I + + S T F V+ A YN ++ + W+H+ V+P
Sbjct: 173 RSRLMIQGFNQRGQRAISMIHLELVMGELSSNTLFHVIDAKPSYNVLIXQPWLHENAVIP 232
Query: 218 STYHQVLCYQTIYG 231
ST +Q C++ G
Sbjct: 233 STLYQ--CFKFYRG 244
>gi|147810276|emb|CAN64705.1| hypothetical protein VITISV_029007 [Vitis vinifera]
Length = 604
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 141 ILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG---------IVTYSDG--SLL 189
+ +D + L + KM+L ++ + L GF G I++ G +L+
Sbjct: 109 VFLDTSGARKWLSMGLI-KMKLPMTTLESLGRALKGFKGSTTIFLCDIILSMVVGLVTLM 167
Query: 190 TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
FLV K PYN ILG+ WI+KM+ VPSTYHQ
Sbjct: 168 AQFLVFKDPFPYNTILGQAWINKMKAVPSTYHQ 200
>gi|260401292|gb|ACX37123.1| gag-pro [Pisum sativum]
Length = 1107
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 94 EEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILD 153
E+F + + +SF DL H+ AL IS+ + + +L+D GSS+N+L
Sbjct: 812 EQFDSIVANITACNTLSFCDADLPEEGRDHNMALHISLNCKSDALSNVLVDTGSSLNVLP 871
Query: 154 DATVEKMRLEQDKIKPFEQPLIGFSGIVTYS-DGSLLT------------------DFLV 194
+T+ ++ ++ P + SG+V + DGS T F V
Sbjct: 872 KSTLSRLS--------YQGPPMRQSGVVVKAFDGSRKTVIGEVDLPIKIGPSDFQVTFQV 923
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
+ Y+ +LGR WIH+ V ST HQ L + + +GG++A
Sbjct: 924 MDIHPSYSCLLGRPWIHEAGAVTSTLHQKLKFVKNKKLVVVGGEKA 969
>gi|29126356|gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1380
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 106/276 (38%), Gaps = 55/276 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE---DKQPQNQNNFLKKDQIENST 57
C H H DC KK +E+ I+ + K VE + PQ + +++
Sbjct: 526 CPIHKTDIHVLEDCFVFKKSLEKHIASEKGKRVRVVEKDVEAAPQ---------ESDSAY 576
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKC-VKLDVQSEVSFLPQDL 116
+P+ V+ H+ + Y KRE + E + C L ++ + Q +
Sbjct: 577 PDPDLHVS----------HIFGDSTTYSSKREYKKVER--EVCSTWLGAAPKMKWSEQKI 624
Query: 117 KLIQSPHDDA--------LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ + H +V+ I N V R+LID GSS+N+L +T++ M + Q ++
Sbjct: 625 EFSEEDHPKTAVIPGIYPIVVEPTIRNIKVARVLIDGGSSINLLFTSTLDAMGIPQSELT 684
Query: 169 PFEQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQW 209
P +QP F GI S L F V + + YNAI+GR
Sbjct: 685 PTDQP---FHGITPQSSSRPLGKITLPVTFGQSNNFRTEQITFDVAEFDTAYNAIIGRTA 741
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+ K +QVL G I G+ C
Sbjct: 742 LAKFMAASHYAYQVLKMPGPKGTITIQGNTKLAVQC 777
>gi|77553881|gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1412
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF P+D + + PH + LVIS ++ VR+IL+D GSS N++ KM L +
Sbjct: 240 QISFGPEDAEGVLFPHQEPLVISAEVAGFEVRQILVDGGSSANVIFAEAYAKMGLPTLAL 299
Query: 168 KPFEQPLIGFSGIVTYSDG------SLLTD---------FLVVKATSPYNAILGRQWIHK 212
L GF G G + TD F +V YNAI GR ++K
Sbjct: 300 TQAPTSLRGFGGEAVQVLGQVQLAVAFGTDENRREEQILFDIVDIPYNYNAIFGRATLNK 359
Query: 213 MRVVPSTYHQVL 224
+ ++H L
Sbjct: 360 FEAI--SHHNYL 369
>gi|147770964|emb|CAN60961.1| hypothetical protein VITISV_013253 [Vitis vinifera]
Length = 434
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH + H T+ C L +E LI G QN N+ K
Sbjct: 215 CAFHKEHGHTTKTCWCLHYLVERLIKAGH-----------SQNHNSGAPKAPAATKA--- 260
Query: 61 EQIVNTI-MAPLPLEVHMTKERNVYCK----KREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
++N I P E ++R + + I + + + + F P D
Sbjct: 261 --VINYINGGPSDEEYDSKRKRQKLLRAASIREHINSIRPGLTRGGPRPIDGTIIFPPVD 318
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
PH D L++S++IG+ VRRIL+D GSS +++ + V M ++ + L
Sbjct: 319 PTRTLQPHRDTLILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLENPGRILS 378
Query: 176 GFSGIVTYSDGSLL 189
GF+G+ T S G ++
Sbjct: 379 GFNGLSTTSLGDIV 392
>gi|54287556|gb|AAV31300.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54291739|gb|AAV32108.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1988
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPVGF 711
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + + TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSNIKQAVTCDKESCDMAQTREIASAR 929
>gi|38347562|emb|CAE04995.2| OSJNBb0093G06.3 [Oryza sativa Japonica Group]
Length = 1986
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ +K
Sbjct: 708 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|50838960|gb|AAT81721.1| putative retrotransposon protein [Oryza sativa Japonica Group]
gi|108710481|gb|ABF98276.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1002
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 45/271 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC LKK +++ ++ + K V+V +K ++ E+ ++ P
Sbjct: 691 CPIHKTDRHSLEDCLVLKKSLKKHMALEKCKR-VRVVEKD-------VEAAAQESDSAYP 742
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLPQ 114
+ ++ H+ Y KRE + E + K+ + ++ F +
Sbjct: 743 DSDLHV--------SHIFGGSTAYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFSEE 794
Query: 115 D-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D K P + +V+ I N V R+LID GSS+N+L +T++ M + + ++ P +QP
Sbjct: 795 DHPKTAVIPGRNPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQP 854
Query: 174 LIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIHKMR 214
F GI S L F V + + YNAI+GR + K
Sbjct: 855 ---FHGITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFM 911
Query: 215 VVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 912 AASHYAYQVLKMPGPKGTITIQGNAKLAVQC 942
>gi|38346695|emb|CAE02180.2| OSJNBa0080E14.11 [Oryza sativa Japonica Group]
Length = 2001
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENST-- 57
C + + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHYPNSNHVAKDCFVYKQFAEQ---------YAKTTRKNSDEEQSTSRKKDDGDTPVEF 711
Query: 58 -SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAR 929
>gi|13957634|gb|AAK50589.1|AC084404_14 putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709362|gb|ABF97157.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 627
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 98/260 (37%), Gaps = 46/260 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C+ HN RH DCR+++ E + K + E K P D+ + E
Sbjct: 342 CSVHNTYRHSLADCRSVRNLAEWFRKADEEKRQGRREGKAPATSTG----DRFKAMRRE- 396
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
++A +P + K R +S+ + D + L + KL
Sbjct: 397 ------LLATVPTHEVVRKAR--------------WSEVKLTFDQSDHPTMLARGGKL-- 434
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP----------F 170
ALV+S I N ++R+L+D G+S++I+ A + ++ K++P
Sbjct: 435 -----ALVVSPTIYNVKMKRVLVDGGASLSIISPAAFDVLKAPGMKLQPSLLIIGVTPGH 489
Query: 171 EQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
PL VT+ D + DF V PYNA+LGR + K + +
Sbjct: 490 TWPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGRPALVKFMAATHYAYLQMKM 549
Query: 227 QTIYGIEEIGGDQATTRTCA 246
G I GD CA
Sbjct: 550 PGPAGPITIFGDVKVALACA 569
>gi|34761724|gb|AAQ82035.1| gag/pol polyprotein [Pisum sativum]
Length = 1105
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
V F DL H+ AL I+++ ++ +L+D GSS+N+L + ++K+ +E +
Sbjct: 813 VGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPNQILKKIDVEGFVLT 872
Query: 169 PFEQPLIGFSG---------IVTYSDGSLLTD--FLVVKATSPYNAILGRQWIHKMRVVP 217
P + + F G + G + D F V+ Y+ +LGR WIH V
Sbjct: 873 PSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVS 932
Query: 218 STYHQVLCY------QTIYGIEEI 235
ST HQ L Y T+ G EEI
Sbjct: 933 STLHQKLKYVWNGQIVTVCGEEEI 956
>gi|449479777|ref|XP_004155704.1| PREDICTED: uncharacterized protein LOC101228241 [Cucumis sativus]
Length = 924
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F +DL L H+ L +S + V RILIDNGS+VNI+ +T+ ++ + D++
Sbjct: 334 IDFSDEDLLLGSKLHNRPLYVSGYVREQRVDRILIDNGSAVNIMPKSTMWQLGILMDELS 393
Query: 169 PFEQPLIGFS-------GIVTY----SDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+ + GF+ G++ D F V+ + + Y ++LG WIH VV
Sbjct: 394 NSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTTYKSLLGCPWIHGNGVVT 453
Query: 218 STYHQVL-CYQTIYGIEEIGGD 238
ST HQ YQ G++++ D
Sbjct: 454 STLHQCFKFYQD--GVKKVEAD 473
>gi|12583803|gb|AAG59655.1|AC084319_13 putative gypsy-type retrotransposon [Oryza sativa Japonica Group]
Length = 1185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 563 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPADG---DQGTSKKKDDEDDAPTGF 614
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE + +
Sbjct: 615 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SETA-----I 662
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 663 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 722
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 723 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAK 782
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 783 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 815
>gi|38344596|emb|CAE05341.2| OSJNBa0079M09.16 [Oryza sativa Japonica Group]
Length = 1601
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 48/289 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ ++ + K D++ Q+ KKD +
Sbjct: 643 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEE---QSTSRKKDDGDTPAGFQ 694
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 695 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 742
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 743 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 802
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 803 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 862
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q E+ S R
Sbjct: 863 MAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTHEMASAR 911
>gi|55168025|gb|AAV43893.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168066|gb|AAV43934.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1565
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 39/265 (14%)
Query: 4 HNDCRHYTRDCRTLKKYIEELIS--KGQLKEFV-KVEDKQPQNQNNFLKKDQIENSTSEP 60
H RH DC KK +E+ I+ KG+ V K E+ P E+ ++ P
Sbjct: 557 HKTDRHSLEDCLVFKKSLEKHIAFEKGKRVRVVEKDEEAVPH-----------ESDSAYP 605
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL-KLI 119
+ ++ + + +R KRE+ + + + +K Q ++ F QD K
Sbjct: 606 DSDLH-VSHIFGGSTTYSSKREYKKVKREVYSTWQGAAPKMKWSEQ-KIEFSEQDHPKTA 663
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP F G
Sbjct: 664 VIPGQYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQP---FHG 720
Query: 180 IVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
I S L F V + + YNAI+GR + K
Sbjct: 721 ITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYA 780
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G + G+ C
Sbjct: 781 YQVLKMSGPKGTITVQGNAKLAVQC 805
>gi|147805290|emb|CAN69360.1| hypothetical protein VITISV_029446 [Vitis vinifera]
Length = 757
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++NI AT + P Q + +
Sbjct: 493 HVRPLYITVGCSGRRVPSVLLDNGSALNIFPLATAIALGFAPSDFGPSTQTVRAYDSTKG 552
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH+ R +PS+ HQ
Sbjct: 553 EVMGTLVIDLQIGPAIFSTLFQVLRIPASFNLLLGRPWIHRARAIPSSLHQ 603
>gi|116309829|emb|CAH66866.1| H0307D04.11 [Oryza sativa Indica Group]
Length = 2017
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ K K D++ D
Sbjct: 661 CPHHPNSNHVAKDCFIYKQFADQYT-----KTTRKNSDEEQSTSRKKDDGDAPAGFQDHR 715
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 716 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTSQYLRW---SEIA-----IKFDR 763
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 764 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 823
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 824 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 883
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 884 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQIREMASAR 929
>gi|22539085|gb|AAN01257.1| Hypothetical protein similar to putative retroelement [Oryza sativa
Japonica Group]
gi|31431343|gb|AAP53138.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 908
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 104/265 (39%), Gaps = 37/265 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH +C KK +E+ ++ + K V+V +E +T
Sbjct: 601 CPIHKSDRHSLEECLIFKKSLEKQLALEKGKR-VRV----------------VEKATEAT 643
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKLDV---QSEVSFLPQDL 116
Q ++ L V H+ Y KRE + E V + + ++ F +D
Sbjct: 644 TQDSDSAYLDSDLHVSHIFGGSTAYSSKREYKKVEREGVTGVAPKMKWSEQKIEFSDEDR 703
Query: 117 -KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
K P +V+ I N V R+L+D GSS+N+L +T++ M + Q + P +QP
Sbjct: 704 PKATVIPGRYPIVVEPTIRNNKVVRVLVDGGSSINLLFASTLDAMGIPQSVLTPTDQPFH 763
Query: 176 GFSGI-----------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
G + VT+ S L F V + + YNAI+GR + K
Sbjct: 764 GITQFSSKPLGKITLPVTFRQASNLRTQQITFDVAEFDTAYNAIIGRTALAKFMAASHYA 823
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 824 YQVLKMPGPKGTITIQGNAKLAVQC 848
>gi|77555082|gb|ABA97878.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 493
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF + +D + S L + + + P H L I+ + + ++++
Sbjct: 241 PAEFGARQANVDEVEDASARLMLSLEQAIFEKPDGTENRHLKPLYINGYVNGKPMSKMMV 300
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF-----------SGIVTYSDGSLLTDF 192
D G++VN++ AT K+ D + L F + +T S ++ T F
Sbjct: 301 DGGATVNLMPYATFRKLGRNSDDLIKTNMVLKEFVDNPSETRGVLNAELTVSSKTVPTTF 360
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGK 252
V+ Y+ +LGR WIH +PST HQ L IE + D++ A +G+
Sbjct: 361 FVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKIEIVPADRSVNVASADLALGR 420
>gi|24899466|gb|AAN65036.1| putative RIRE2 retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1300
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 42/270 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + + K D N +D +
Sbjct: 449 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDGDQGTSNKNDDEDDAPTGFQDH 503
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A + + + ++ SE + +K
Sbjct: 504 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SETA-----IKFD 551
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 552 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFANTLDDMQIPRTELKPSN 611
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+AILGR + +
Sbjct: 612 APFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEVADFETAYHAILGRPALAEFMA 671
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 672 VPHYTYMMMKMPGPRGVISLQSDIKQAVTC 701
>gi|20303586|gb|AAM19013.1|AC084748_3 putative gag-pol precursor protein [Oryza sativa Japonica Group]
Length = 1497
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 42/270 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + + K D N +D +
Sbjct: 372 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDGDQGTSNKNDDEDDAPTGFQDH 426
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A + + + ++ SE + +K
Sbjct: 427 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SETA-----IKFD 474
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 475 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFANTLDDMQIPRTELKPSN 534
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+AILGR + +
Sbjct: 535 APFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEVADFETAYHAILGRPALAEFMA 594
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 595 VPHYTYMMMKMPGPRGVISLQSDIKQAVTC 624
>gi|147795609|emb|CAN72180.1| hypothetical protein VITISV_013586 [Vitis vinifera]
Length = 496
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 55/159 (34%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H + H T CR+L +E+LI G LK++++ + + N P
Sbjct: 266 CAYHKEHGHTTETCRSLHYLVEKLIRAGHLKQYLRSDARAWDNWGG-------------P 312
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
I TI+ PL D I
Sbjct: 313 RPIDGTIIFPL------------------------------------------VDPTRIL 330
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
PH DAL++S+++G +RRIL+D GSSV++ + +++
Sbjct: 331 QPHRDALILSLEMGGFDMRRILVDPGSSVDLANFVRIQR 369
>gi|108705936|gb|ABF93731.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1953
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 42/286 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ K K D++ D
Sbjct: 619 CPHHPNSNHVAKDCFVYKQFADQYT-----KTTRKNSDEEQSTSRKKDDGDAPAGFQDHR 673
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 674 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 721
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 722 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 781
Query: 173 P----LIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVV 216
P ++G S VT+ F V + Y+AILGR + K V
Sbjct: 782 PFHGVILGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 841
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
P + ++ G+ + D TC Q RE+ S R
Sbjct: 842 PHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMTSVR 887
>gi|50511475|gb|AAT77397.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 103/274 (37%), Gaps = 51/274 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKV-EDKQPQNQNNFLKKDQIENST 57
C H RH DC KK +E+ ++ KG+ V++ E+ P ++ + S
Sbjct: 671 CLIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVRVVEMNEETAPHEPDSAYPDSDLHVS- 729
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
H+ Y KRE + E + K+ + ++ F
Sbjct: 730 ------------------HIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEF 771
Query: 112 LPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
+D K P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P
Sbjct: 772 SEEDHPKTAVIPGQYPIVVEPTIRNFKVARVLIDGGSSINLLFASTLDTMGIPQSELTPT 831
Query: 171 EQPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIH 211
+QP F GI S L F V + + YNAI+GR +
Sbjct: 832 DQP---FHGITPQSSSRPLGKIMLPMTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALA 888
Query: 212 KMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
K +QVL G I G+ C
Sbjct: 889 KFMAASHYAYQVLKMPGPKGTITIQGNTKLAVQC 922
>gi|78708515|gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1783
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 101/266 (37%), Gaps = 58/266 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H RH DC KK +E+ ++ KG+ V+ ++ P ++++ D
Sbjct: 746 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVRVVEKNEESPPHESDSAYPDS------ 799
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKL 118
+ V+ I+A K + E EFS+ + + +P +
Sbjct: 800 --DLHVSHILA------------GAAPKMKWSEQKMEFSEAD-----HPKTAVIPGRYPI 840
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ P I N V R+LID GSS+N+L +T+E M + Q ++ P +QP F
Sbjct: 841 VVEP---------TIRNIKVARVLIDGGSSINLLFASTLEAMGIPQSELTPTDQP---FH 888
Query: 179 GIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
GI S L F V + + YNAI+GR + K
Sbjct: 889 GITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFVAASHY 948
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 949 AYQVLKMPGPKGTITIQGNAKLAVQC 974
>gi|108711348|gb|ABF99143.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 42/270 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + + K D N +D +
Sbjct: 467 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDGDQGTSNKNDDEDDAPTGFQDH 521
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A + + + ++ SE + +K
Sbjct: 522 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SETA-----IKFD 569
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 570 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFANTLDDMQIPRTELKPSN 629
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+AILGR + +
Sbjct: 630 APFHGVIPGLSATPLGQITLPVTFGTQENFRTENVCFEVADFETAYHAILGRPALAEFMA 689
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 690 VPHYTYMMMKMPGPRGVISLQSDIKQAVTC 719
>gi|38605822|emb|CAE05231.3| OSJNBa0011K22.13 [Oryza sativa Japonica Group]
Length = 1755
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D EVS KL+ SP H L I+ I +
Sbjct: 844 PTEFGAKQADVDEVEEVS-----AKLVLSPEQEVFEKPEGTENRHLKPLYINSYINGKPM 898
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------S 187
++++D G++VN++ AT K+ + + L F G + + G +
Sbjct: 899 SKMMVDGGAAVNLMPCATFRKLGRNSEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKT 958
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ LGR WIH +PST HQ L
Sbjct: 959 IPTTFFVIDGKGSYSLFLGRDWIHANCFIPSTMHQCL 995
>gi|108709395|gb|ABF97190.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1773
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 701 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPADG---DQGTSKKKDDEDDAPTGF 752
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE + +
Sbjct: 753 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SETA-----I 800
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 801 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 860
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 861 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAK 920
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 921 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 953
>gi|147803555|emb|CAN68715.1| hypothetical protein VITISV_004899 [Vitis vinifera]
Length = 2452
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ C V +++DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSGHTRPLYISVGCSGCRVPSVILDNGSALNVCPLATAIALGYAPSDFG 68
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 69 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 128
Query: 218 STYHQ 222
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|21741359|emb|CAD39982.1| OSJNBa0032B23.2 [Oryza sativa Japonica Group]
Length = 337
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+D PH D LVIS +I V RIL D GSS +++ KM L +
Sbjct: 50 ISFGPEDAVGFMFPHQDPLVISAEIAGFEVPRILDDGGSSADVIFAEAYTKMGLLTQALT 109
Query: 169 PFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKM 213
P L GF G +V + G + F VV YNAI GR ++K
Sbjct: 110 PAPASLRGFGGEAVQVLGQALLLVAFGSGENRHEEQVLFDVVDIPYNYNAIFGRATLNKF 169
Query: 214 RVVPSTYHQVL 224
+ ++H L
Sbjct: 170 DAI--SHHNYL 178
>gi|41469575|gb|AAS07318.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 968
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 413 CTVHNTSLHDLADCRAVKSLAERTRKWAEEKRQERREGKTPAAPAGNRRGEAKQKATAED 472
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 473 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRQARWS 528
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 529 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 583
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 584 IKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVAGLSLPYNAV 642
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 643 LGRPALVKYMAAVHYAYLQM 662
>gi|38345918|emb|CAE04522.2| OSJNBb0076A11.6 [Oryza sativa Japonica Group]
Length = 1453
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 57/291 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQN--QNNFLKKDQIENSTS 58
C H + H +DC K++ E+ + ++P N Q KKD +++ +
Sbjct: 206 CPHHPNSNHAAKDCFVYKQFAEQYVKNA----------RKPSNGDQGTSKKKDDEDDAPT 255
Query: 59 ----EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQ 114
+++ + PL E +R +REI A V+ + + +L
Sbjct: 256 GFQDHRKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPNTPQYLRWLEI 303
Query: 115 DLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+K +S H D LV+ + N +RR LID GS++NIL T+ M++ + +
Sbjct: 304 AIKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLVDMQIPRTE 363
Query: 167 IKPFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWI 210
+KP P G G+ G + F V + Y+ ILGR +
Sbjct: 364 LKPSNSPFHGVIPGLSATPLGQITLPVTFGTRENFRTENICFKVADFETAYHTILGRPAL 423
Query: 211 HKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
K VP + ++ G+ + D TC K++ E+ TR
Sbjct: 424 AKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAITC-----DKESCEMAQTR 469
>gi|61656643|emb|CAE75952.2| B1159F04.15 [Oryza sativa Japonica Group]
Length = 1823
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D EVS KL+ SP H L I+ I +
Sbjct: 844 PTEFGAKQADVDEVEEVS-----AKLVLSPEQEVFEKPEGTENRHLKPLYINSYINGKPM 898
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------S 187
++++D G++VN++ AT K+ + + L F G + + G +
Sbjct: 899 SKMMVDGGAAVNLMPCATFRKLGRNSEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKT 958
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ LGR WIH +PST HQ L
Sbjct: 959 IPTTFFVIDGKGSYSLFLGRDWIHANCFIPSTMHQCL 995
>gi|51038246|gb|AAT94049.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1844
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 108/290 (37%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKK----DQIENS 56
C H + H +DC K + E+ + K K + + KK D
Sbjct: 661 CPHHPNSNHAAKDCFVYKHFAEQ---------YTKTTRKNSDEEQSTSKKKDDGDPPAGF 711
Query: 57 TSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A V+ D + + +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETAI 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + +++
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELR 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGAIPGLSATPLGQITLPVTFGTRENFRTENICFEVTDFETAYHAILGRPALAK 879
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ G+ + D TC Q RE+ S R
Sbjct: 880 FMAVPHYTYIMMKMPGPRGVLSLRSDIKQAVTCDKESCEMAQTREMASAR 929
>gi|38347305|emb|CAE02300.2| OSJNBa0042F21.7 [Oryza sativa Japonica Group]
Length = 1711
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P E+ K +D E S L + ++ + P H L I+ + + +I++
Sbjct: 882 PTEYEAKQANVDEVEEASTRLVLSPEQEVFEKPEGTENRHLKPLYINGYVNGKPMSKIMV 941
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------F 192
+ G++VN++ DAT K+ D + L F G + + G L + F
Sbjct: 942 EGGAAVNLMPDATFRKLGRNSDDLIKTNMVLKDFGGNPSETKGVLNVELTVGSMIVPAIF 1001
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ Y+ +LGR WIH +PST HQ L
Sbjct: 1002 FVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1033
>gi|147815054|emb|CAN72336.1| hypothetical protein VITISV_038597 [Vitis vinifera]
Length = 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D + PH D L++++ I + VR+IL+D GSS+N+L +T +M +K
Sbjct: 57 ITFPPLDPNRVLHPHKDVLILTLGISDFDVRQILVDPGSSINLLQLSTYRQMGFSPSALK 116
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAIL 205
+ L F+G T S G ++ F +V+ SP+N I+
Sbjct: 117 NLRRILSRFNGASTISLGDVVLLVQAGPVIQNVHFSMVEDLSPFNTIM 164
>gi|38347673|emb|CAE05607.2| OSJNBa0054D14.8 [Oryza sativa Japonica Group]
Length = 1702
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L +I V R+ +D G VN++ + +K+ DK+K L GF+G T
Sbjct: 775 HMKPLYRKGRIDGKPVSRMQVDGGVVVNLMPYSLFKKLGCGDDKLKKTNMILNGFNGEPT 834
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G +L T F +V YN ILG WIH VPST HQ L
Sbjct: 835 EAKGIFSVELTAGNKTLPTGFFIVDVQGNYNVILGHCWIHANCCVPSTLHQCL 887
>gi|38344712|emb|CAE05254.2| OSJNBb0115I09.16 [Oryza sativa Japonica Group]
Length = 808
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 475 CTVHNTTLHDLADCRAVKSLAERTRKWEEEKRQERREGKAPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPEATVATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVAWGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V YHQ+
Sbjct: 705 LGRPVLVKFMAAVHYAYHQM 724
>gi|147866425|emb|CAN84140.1| hypothetical protein VITISV_033160 [Vitis vinifera]
Length = 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
L+VK SPYN I+ W+HKM+V+PSTYHQ++ Y G ++ G Q + C
Sbjct: 147 LLVKDLSPYNTIMEWVWLHKMKVIPSTYHQMVSYLIESGQVDLLGSQLVAQQC 199
>gi|38567751|emb|CAE76039.1| B1292H11.25 [Oryza sativa Japonica Group]
Length = 1610
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 107 SEVSFLPQDLKLIQSPHDDA--------LVISIKIGNCLVRRILIDNGSSVNILDDATVE 158
S++ +L Q ++ + + H +V+ I N V R+L+D GSS+N+L +T++
Sbjct: 509 SKMKWLGQKVEFLDADHHKTAVTQGRYPIVVEPTIRNINVARVLVDGGSSINLLFASTLD 568
Query: 159 KMRLEQDKIKPFEQPLIGFSGIVTYSDG------SLLTDFLVVKATSPYNAILGRQWIHK 212
M + + ++ P +QP F GI S +L F V + + YNAI+GR + K
Sbjct: 569 AMGIPRGELTPTDQP---FHGITPQSSSKPLGKITLPITFDVAEFDTAYNAIIGRTALAK 625
Query: 213 MRVVPSTYHQVL 224
+QVL
Sbjct: 626 FMAASHYVYQVL 637
>gi|77555417|gb|ABA98213.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 708 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|54287609|gb|AAV31353.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 114/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 456 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 506
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 507 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 554
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 555 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 614
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 615 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 674
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ + + D TC Q RE+ S R
Sbjct: 675 FMAVPHYTYMMMKMPGPRRVLSLRSDIKQAVTCDKESCDMAQTREMASAR 724
>gi|55168030|gb|AAV43898.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1190
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERCEGKAPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPEATVATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A E
Sbjct: 591 EVA-----LTFDQTDHTPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFEA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTRPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPSLVKFMAAVHYAYLQM 724
>gi|77552111|gb|ABA94908.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1994
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 708 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|77556935|gb|ABA99731.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1752
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 49/272 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + ++P + + K + + + P
Sbjct: 573 CPHHPNSNHVAKDCFVYKQFAEQYVKNA----------RKPSDGDQGTSKKKDDEDDAPP 622
Query: 61 ------EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQ 114
+++ + PL E +R +REI A + + + ++ SE++
Sbjct: 623 GFQDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA---- 671
Query: 115 DLKLIQSPHDD-----ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+K +S H D LV+ + N +RR ID G+++NIL T++ M++ + ++KP
Sbjct: 672 -IKFDRSDHPDRVVRYPLVLDPVVRNVKLRRTFIDGGNALNILFAKTLDDMQIPRTELKP 730
Query: 170 FEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 731 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKF 790
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + + G+ + D TC
Sbjct: 791 MAVPHYTYMTMKMPGPRGVISLRSDIKQALTC 822
>gi|46063437|gb|AAS79740.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1756
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 114/290 (39%), Gaps = 50/290 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENSTS- 58
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 400 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 450
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 451 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 498
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 499 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 558
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 559 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 618
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
VP + ++ + + D TC Q RE+ S R
Sbjct: 619 FMAVPHYTYMMMKMPGPRRVLSLRSDIKQAVTCDKESCDMAQTREMASAR 668
>gi|224106742|ref|XP_002314270.1| predicted protein [Populus trichocarpa]
gi|222850678|gb|EEE88225.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 55/260 (21%)
Query: 3 FHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQ 62
FH RH T C L K IE LI+K +++ VK D + L +++ +S+P Q
Sbjct: 16 FHQGRRHDTEQCYALNKEIERLITKYYIQKIVK-RDTHIE-----LGREE----SSQPNQ 65
Query: 63 I---VNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I+ R Y K+ E + F ++ + +
Sbjct: 66 VLLEINVILGGTSAIGDSGSGRKKYRKQVLTNIWHEL------------IIFTLENREGV 113
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+DALVIS + LV RIL+D+G +++L +E +
Sbjct: 114 TFTLEDALVISTVLAIHLVYRILMDDG--ISMLVKGALEIL------------------- 152
Query: 180 IVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
+ D +V+ + YN IL R +H++ V +T + L + T G++ I G+Q
Sbjct: 153 --------VTNDLIVIDMSLTYNTILERSLLHQINVFINTKYLTLKFPTYKGVDMIWGNQ 204
Query: 240 ATTRTCASNGMGKQNRELGS 259
++R A M K LGS
Sbjct: 205 TSSRQYAFF-MFKGQEGLGS 223
>gi|77554616|gb|ABA97412.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1053
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 57/245 (23%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CAFH H T CR +++ +G +D +PQ + + +E
Sbjct: 283 CAFHERSSHTTEQCRNIRQ-------RG------NAQDPRPQ-----------QGAAAEA 318
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQ-------------- 106
+ AP P E +R V + P + SK+ K+ ++
Sbjct: 319 PREAVQEQAP-PAEQRQDVQRGVMQVIIRADPPNQLSKRQKKMQLRMVHNITSAGEGASQ 377
Query: 107 ---SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
++ F P+D + + PH D+LVIS ++ VR+IL+D GSS +++ K+ L
Sbjct: 378 YLNQQIFFGPEDAEGVMFPHQDSLVISAEVAGFEVRQILVDGGSSADVIFAEAYAKIGLP 437
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ L GF +V + G + + F VV YNAI R
Sbjct: 438 TLALTQTLASLHGFGEEAVQVLGQAQLVVAFGTGENIREEQILFDVVDIPYNYNAIFSRA 497
Query: 209 WIHKM 213
++K
Sbjct: 498 TLNKF 502
>gi|34015095|gb|AAQ56293.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1311
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 189 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 240
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R + EI A + + + ++ SE++ +
Sbjct: 241 QDHRKELNHIFGGPLAYE----SKRKQKLTEWEINAVQPNTPQYLRW---SEIA-----I 288
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 289 KFDRSDHPDRVVHPGRYPLVLDLVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 348
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 349 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAK 408
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 409 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 441
>gi|53982138|gb|AAV25234.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1953
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 708 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 815
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKM 213
P G G+ G + F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 926
>gi|38344494|emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group]
Length = 1230
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 53/289 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K D +Q KKD +++ +
Sbjct: 311 CPHHPNSNHAAKDCFIYKQFTEQYAKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 362
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 363 QDHRKELNHIFGGPLAYE----SKRKQKLTEREISAVQPNTPQYLRW---SEIA-----I 410
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D +LV+ + N ++R LID GS++NIL T++ +++ + ++K
Sbjct: 411 KFDRSDHPDRVVHPGRYSLVLDPVVRNVKLQRTLIDGGSALNILFAKTLDDIQIPRTELK 470
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + YNAILGR + K
Sbjct: 471 PSNAPFHGVIPGLSATPLGQITLSVTFGTQENFRTEKVCFEVADFETAYNAILGRPALAK 530
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 531 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC-----DKESCEMAQTR 574
>gi|77554434|gb|ABA97230.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D +Q KKD +++ +
Sbjct: 481 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 532
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 533 QDHRKELNHIFGGPLAYEY----KRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 580
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 581 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 640
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 641 PSNAPFHGVIPGLSATPLGHITLPVTFGTRENFRTENVCFEVADFETAYHAILGRLALAK 700
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 701 FVAVPHYTYMMIKMPGPRGVISLRNDIKQAVTC 733
>gi|34761721|gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
V F DL H+ AL I+++ ++ +L+D GSS+N+L ++K+ +E +
Sbjct: 813 VGFTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLT 872
Query: 169 PFEQPLIGFSG---------IVTYSDGSLLTD--FLVVKATSPYNAILGRQWIHKMRVVP 217
P + + F G + G + D F V+ Y+ +LGR WIH V
Sbjct: 873 PSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVS 932
Query: 218 STYHQVLCY------QTIYGIEEI 235
ST HQ L Y T+ G EEI
Sbjct: 933 STLHQKLKYVWNGQIVTVCGEEEI 956
>gi|410810514|emb|CCI61379.1| hypothetical protein (K45 marker), partial [Lens orientalis]
Length = 188
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG----------- 186
V ++ +D G+ VN++ + K ++ ++P L + G+ G
Sbjct: 5 VNKVFVDGGAVVNLMPLTLLRKQGKSEEDLRPHNMVLSNYEGMTISILGVIQVELAVGTT 64
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGI-EEIGGDQATTRTC 245
S T F+V+K +N +LGR+WIH + VPST HQ L GI + I DQ+ +T
Sbjct: 65 SRHTLFMVIKYIENFNLLLGREWIHGIGAVPSTLHQRLIIWRKDGIVDNIEADQSYYKTE 124
Query: 246 ASNG 249
G
Sbjct: 125 IPKG 128
>gi|20503036|gb|AAM22724.1|AC092388_8 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1112
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN RH DCR++K E + K + E K P +++ + ++
Sbjct: 403 CSVHNSYRHSLADCRSVKNLAERFRKADENKRQGRRESKAPATSTGDRREEAKNKAPADD 462
Query: 60 -----------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAP---EEFSKKCVKLDV 105
P+ V T+ T R +RE+ A E ++K L+V
Sbjct: 463 GGDSEDLDFQIPQGTVATLDGGGGGACAHTSRRGFKVMRRELLAAVPTHEAARKARWLEV 522
Query: 106 QSEVSFLPQDLKLIQSPHDD-ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F D + S ALV+S I N ++R+L+D G S++I+ A+ + ++
Sbjct: 523 K--LTFDQSDHPTVLSRGGKLALVVSPTIHNVKMKRVLVDGGDSLSIISPASFDALKAPG 580
Query: 165 DKIKP----------FEQPLIGFSGIVTYSDGSLL----TDFLVVKATSPYNAILGR 207
K++P PL VT+ D + DF V PYN +LGR
Sbjct: 581 MKLQPSLSIIGVTPGHMWPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNVVLGR 637
>gi|147768539|emb|CAN60625.1| hypothetical protein VITISV_027087 [Vitis vinifera]
Length = 2221
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V + +DNGS++N+ AT +
Sbjct: 593 IVFSDDDLPPEGSDHTRPLYISVGFSGRRVPSVFLDNGSALNVCPLATAIALGYAPSDFG 652
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ +P+N +LGR WIH+ +P
Sbjct: 653 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTPFNLLLGRPWIHRAGAIP 712
Query: 218 STYHQ 222
S+ HQ
Sbjct: 713 SSLHQ 717
>gi|358343399|ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
gi|355501725|gb|AES82928.1| Receptor-like kinase [Medicago truncatula]
Length = 2313
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H+ AL IS+ + ++ +L+D GSS+N++ +T++++ + ++ + F G
Sbjct: 2055 HNLALHISVNCKSDMLSNVLVDTGSSLNVMPKSTLDQLSYREIPLRRSTFLVKAFDGSRK 2114
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY----- 226
+T + L F V+ + Y+ +LGR WIH V ST HQ L +
Sbjct: 2115 NVLGEIDLPITVGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGK 2174
Query: 227 -QTIYGIEEIGGDQATTRTCASNG 249
T++G E Q ++ +C G
Sbjct: 2175 LVTVHGEEAYLVSQLSSFSCIEAG 2198
>gi|50511459|gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1672
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 114/294 (38%), Gaps = 57/294 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQL--------------KEFVKVEDKQPQNQ 44
C H H DC KK +E+ ++ KG K+F K + P Q
Sbjct: 400 CPIHKSNIHSLEDCLIFKKSLEKQLALEKGNPELPVFRVRKFRSCEKDFPKCSSEVPVFQ 459
Query: 45 -NNFLKKDQIENSTSEPE---------QIVNTIMAPLP------LEVHMTKERNVYCKKR 88
NFL Q + +T P + +N I LP +H +R V C
Sbjct: 460 VRNFLSSFQFKFNTCAPSCEDWLSLLFRNLNFISVLLPGSSCLRTPLHQHVQREV-CSTW 518
Query: 89 EIEAPEEFSKKCVKLDVQSEVSFLPQDL-KLIQSPHDDALVISIKIGNCLVRRILIDNGS 147
+ AP+ +K Q ++ F +D K P +V+ I N V R+L+D GS
Sbjct: 519 QGAAPK------MKWSEQ-KIEFSDEDHPKAAVIPGRYPIVVEPTIRNIKVARVLVDRGS 571
Query: 148 SVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------------IVTYSDGSLL----TD 191
S+N+L +T++ M + + ++ P +QP G + VT+ S
Sbjct: 572 SINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPLGKITLPVTFGRASNFRTEQIT 631
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
F V + + YNAI+GR + K +QVL G I G+ C
Sbjct: 632 FDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPKGTITIQGNAKLAVQC 685
>gi|147801322|emb|CAN77032.1| hypothetical protein VITISV_015343 [Vitis vinifera]
Length = 2281
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL L S H L ISI V +L+DNGS++N+ TV +
Sbjct: 734 DRATCIVFSDDDLPLEGSGHTCPLYISIGCSGRRVPSVLLDNGSALNVCPLTTVIALGYA 793
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHK 212
P Q + + G+L +T F V++ + +N +LGR WIH+
Sbjct: 794 PSDFGPSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPASFNLLLGRPWIHR 853
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 854 AGAIPSSLHQ 863
>gi|147805865|emb|CAN62780.1| hypothetical protein VITISV_014121 [Vitis vinifera]
Length = 434
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D + H+DAL+++ I + VRR+LID G+S+++L + +M L ++
Sbjct: 272 ITFSPIDPNRVLQSHEDALILTPGISSFDVRRVLIDPGNSIDLLQMSVYSQMGLLPSTLE 331
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
L GF+G +T S G ++ L V+A P V+ TYHQ++ Y
Sbjct: 332 NXGWILSGFNGALTISLGDIV---LPVQA-GPITQ----------NVILFTYHQMVSYLX 377
Query: 229 IYGIEEIGGDQATTRTCA 246
G ++ G+Q + C+
Sbjct: 378 XDGHIDLFGNQLSIXQCS 395
>gi|147795639|emb|CAN61210.1| hypothetical protein VITISV_014941 [Vitis vinifera]
Length = 1180
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+I V +L+DNGS++N+ AT + P Q + +
Sbjct: 23 HIRPLYITIGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 82
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +RV+PS+ HQ
Sbjct: 83 KVMGTLMIDLQNSPATFSTLFQVLRIPTSFNLLLGRPWIHIVRVIPSSLHQ 133
>gi|51038039|gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1723
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 45/250 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH +C KK +E ++ + K+ V+V +E +T
Sbjct: 550 CPIHKSDRHSQEECLIFKKTLERQLTLEKGKQ-VRV----------------VEKATEAT 592
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKL-DVQSEVSFLPQDLKL 118
Q ++ L V H + Y KRE + E + C ++ + Q +K
Sbjct: 593 TQDSDSAYPDSDLHVSHTFRGSTAYSSKREYKKVE--CEVCSTWKGAAPKMKWSEQKIKF 650
Query: 119 IQSPHDDALVISIK--------IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
H A VI + I N V R+L+D GSS+N+L +T++ M + + +++P
Sbjct: 651 SDEDHPKAAVIPGRYPIVVKPTIRNIKVARVLVDGGSSINLLFASTLDAMGIPRGELRPT 710
Query: 171 EQPLIGFSG------------IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMR 214
+QP G + VT+ S F V + + YNAI+GR + K
Sbjct: 711 DQPFHGITPQSSSKPLGKITLPVTFGQASNFRTEQITFDVAEFDTTYNAIIGRTALTKFM 770
Query: 215 VVPSTYHQVL 224
+QVL
Sbjct: 771 AASYYVYQVL 780
>gi|21741410|emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]
Length = 2008
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 41/269 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ ++ + K D++ D
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKTAR-----KNSDEEQSTSRKKDDGDAPAGFQDHR 711
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+++ + PL E +R +REI A + + + ++ SE++ +K +
Sbjct: 712 KELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IKFDR 759
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 760 SDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNA 819
Query: 173 PLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 820 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAV 879
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
P + ++ G+ + D TC
Sbjct: 880 PHYTYMMMKMPGPRGVLSLRSDIKQAVTC 908
>gi|108710260|gb|ABF98055.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1890
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 413 CTVHNTSLHDLADCRAVKSLAERTRKWAEEKRQERREGKTPAAPAGNRRGEAKQKATAED 472
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 473 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRQARWS 528
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 529 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 583
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 584 IKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVAGLSLPYNAV 642
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 643 LGRPALVKYMAAVHYAYLQM 662
>gi|20043007|gb|AAM08815.1|AC090486_25 Hypothetical protein [Oryza sativa Japonica Group]
Length = 983
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS---- 178
H L + I V R+L+D G++VN++ + +KM D++K L GF+
Sbjct: 796 HMKPLYLKGHIDGKPVSRMLVDGGAAVNLMLYSLFKKMGRGVDELKKTNMILNGFNDEPT 855
Query: 179 ---GI----VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
GI +T + +L T F +V YN ILGR WIH PST +Q L
Sbjct: 856 EAKGIFSVELTVGNKTLPTAFFIVDVQGNYNVILGRCWIHANCCAPSTLYQCL 908
>gi|147771677|emb|CAN69287.1| hypothetical protein VITISV_035200 [Vitis vinifera]
Length = 439
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
++PH AL++S++IG+ VRRIL+D GSS +++ + V M ++ + L GF+G
Sbjct: 297 KAPHRHALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHNLTGLENPGRILSGFNG 356
Query: 180 IVTYSDGSLL-----------TDFLVVKATSPYNAILG 206
T S G ++ F +V+ SP+N ILG
Sbjct: 357 SSTTSLGDIVLSVQAGPVTLNVQFSMVQDLSPFNVILG 394
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE 37
CAFH + H T +CR L +E LI G LK+++++E
Sbjct: 239 CAFHKEHGHITEECRCLHYLVERLIRAGHLKQYLRLE 275
>gi|48475198|gb|AAT44267.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1315
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 54/275 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + ++Q+ KKD +++ +
Sbjct: 493 CPHHPNSNHAAKDCFVYKQFAEQYAKNARKSTY--------RDQSTSKKKDDEDDAPTGF 544
Query: 59 -EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+P + +N I PL E ++ +REI A V+ D + + +
Sbjct: 545 QDPRKELNHIFGGPLAYESKPKQK----LTEREINA--------VQPDTPQYLRWSETTI 592
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID G+++NIL T++ M++ + ++K
Sbjct: 593 KFDRSDHPDRVVHPGRYPLVLDPVVCNIKLRRSLIDGGTALNILFAKTLDDMQIPRTELK 652
Query: 169 P--FEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
P F I F + DF + Y+AILGR + K VP + ++
Sbjct: 653 PKNFRTENICFE----------VADF-----ETAYHAILGRPALAKFMAVPHYTYMMMKM 697
Query: 227 QTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G+ + D TC K++ E+ TR
Sbjct: 698 PGPRGVISLRSDIKQAVTC-----DKESCEIAQTR 727
>gi|40714700|gb|AAR88606.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1871
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 413 CTVHNTSLHDLADCRAVKSLAERTRKWAEEKRQERREGKTPAAPAGNRRGEAKQKATAED 472
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 473 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRQARWS 528
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 529 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 583
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 584 IKTPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVAGLSLPYNAV 642
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 643 LGRPALVKYMAAVHYAYLQM 662
>gi|147837850|emb|CAN67148.1| hypothetical protein VITISV_008839 [Vitis vinifera]
Length = 1747
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L IS+ V +L+DNGS++NI AT + P Q + +
Sbjct: 645 SDHTRPLYISVGCSGRRVPSVLLDNGSTLNICPLATAIALGYAPSDFGPSTQTVRAYDST 704
Query: 181 VTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L +T F V++ + +N +LGR WIH+ R +PS+ HQ
Sbjct: 705 RREVMGTLEIELLIGPTTFITVFQVLRIPTSFNLLLGRPWIHRARAIPSSLHQ 757
>gi|77553077|gb|ABA95873.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 856
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++SF P+D + + PH D LVIS ++ VRRIL+D GSS +++ KM L
Sbjct: 20 LNQQISFGPEDAEGVLFPHQDPLVISAEVVGFEVRRILVDGGSSADVIFAEAYVKMGLPT 79
Query: 165 DKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQW 209
+ L GF G +V + + F V+ YNAI GR
Sbjct: 80 LALTQAPASLRGFGGEAVQVLGQVQLVVAFGTSENRREEQILFDVIDIPYNYNAIFGRAT 139
Query: 210 IHKMRVVPSTYHQVL 224
++K + ++H L
Sbjct: 140 LNKFEAI--SHHNYL 152
>gi|57863837|gb|AAS75250.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1744
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 42/270 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + + K D+ N +D +
Sbjct: 510 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDEDQGTSNKKDDEDDAPTGFQDH 564
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A + + + ++ SE++ +K
Sbjct: 565 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----IKFD 612
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N ++R LID GS++NIL T++ M++ + ++KP
Sbjct: 613 RSDHPDRVVHPGRYPLVLDPVVRNVKLQRTLIDGGSALNILFAKTLDDMQIPRMELKPSN 672
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V Y+AILGR + K
Sbjct: 673 APFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFEIAYHAILGRPALAKFMA 732
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 733 VPHYTYMMMKMPGPRGVISLRSDIKQAVTC 762
>gi|51854462|gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1528
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++ F P+D + + PH D LVIS +I VRRIL++ GSS +++ KM L
Sbjct: 482 LNQQIFFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVNGGSSADVIFAEAYAKMGLTT 541
Query: 165 DKIKPFEQPLIGFSG--IVTYSDGSLLTDFLV---VKATSPYNAILGRQWIHKMRVVPST 219
+ P L GF G + L+ F + YN I GR ++K + +
Sbjct: 542 QALTPALTSLRGFGGEAVQVLGQAHLIVAFGTGENRREEQNYNTIFGRATLNKFEAI--S 599
Query: 220 YHQVL 224
+H L
Sbjct: 600 HHNYL 604
>gi|54287555|gb|AAV31299.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54291738|gb|AAV32107.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1857
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 53/289 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + + K D ++Q KKD +++ +
Sbjct: 617 CPHHPNSNHTAKDCFVYKQFAEQYVKNAR-----KPSD---EDQGTSKKKDDEDDAPTGF 668
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI + + + ++ SE++ +
Sbjct: 669 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINVVQPNTPQYLQW---SEIA-----I 716
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS+++IL T++ M++ + ++K
Sbjct: 717 KFDRSDHPDRVVHPGQYPLVLDPVVRNVKLRRTLIDGGSALDILFSKTLDDMQIPRTELK 776
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 777 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADLETAYHAILGRPALAK 836
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 837 FMAVPYYTYMMMKMPGPRGVISLQSDIKQAVTC-----DKESCEMAQTR 880
>gi|21672089|gb|AAM74451.1|AC124213_9 Putative retroelement [Oryza sativa Japonica Group]
gi|78708454|gb|ABB47429.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1077
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C +HN H T DC+ ++ ++ L ++ + +E VE Q N+ LKK +
Sbjct: 178 CKWHNSGSHSTNDCKNQERRVQRLRNRQRFQE---VE----QEINHRLKKTKPRQEWRVK 230
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREI--EAPEEFSKKCVKLDVQSEVS----FLPQ 114
Q + K ++V + P EF +D E S LP+
Sbjct: 231 NQAATADEVKADEAKRLAKGKSVVTASVNMVFTLPAEFGANQADVDEIEEASARLVLLPE 290
Query: 115 DLKL-----IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM-RLEQDKIK 168
+ H L + + + ++++D G++V+++ AT +K+ R +D IK
Sbjct: 291 QASFEKPEGTDNRHLKPLYTNGYVNGKPMSKMMVDGGATVHLMQYATFKKLGRNAKDLIK 350
Query: 169 PFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
L F G +T ++ T F V+ Y+ +LGR WIH +P
Sbjct: 351 T-NMVLKDFGGNPSENKGVLNVELTIGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIP 409
Query: 218 STYHQVL 224
ST HQ +
Sbjct: 410 STMHQCM 416
>gi|147770598|emb|CAN69031.1| hypothetical protein VITISV_000841 [Vitis vinifera]
Length = 95
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 194 VVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
VV+ SP+NAI+GR W+H M+V+PSTYHQ++ Y
Sbjct: 46 VVEDLSPFNAIMGRTWLHGMKVIPSTYHQMVSY 78
>gi|52353673|gb|AAU44239.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1568
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 37/231 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQ----NQNNFLKKDQIENS 56
C+ HN RH DCR+++ E + K + E K P NQ K +
Sbjct: 389 CSVHNTYRHSLADCRSVRNLAERFRKADEEKRQGRREGKAPATSTGNQREEAKNKAPADD 448
Query: 57 TSEPE----QIVNTIMAPLP-LEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSF 111
+ E QI I+A L T R+ +RE+ A V + S
Sbjct: 449 GGDSEDLDFQIPQGIVATLDGGACAHTSRRSFKAMRRELLAA-----------VPTHESD 497
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
P L + AL++S I N ++R+L+D G+S++I+ A + ++ K++P
Sbjct: 498 HPTVLSR-GGGGELALLVSPTIYNVKIKRVLVDGGASLSIISPAAFDALKAPGMKLQP-S 555
Query: 172 QPLIGFSG-----------IVTYSDGSLL----TDFLVVKATSPYNAILGR 207
P+IG + VT+ D + DF V PYNA+LGR
Sbjct: 556 LPIIGVTPGHTWPLGHVELPVTFGDSTNFRTERIDFDVADLNHPYNAVLGR 606
>gi|77550214|gb|ABA93011.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1254
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 95 EFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILIDN 145
EF K +D E S FL + + + P H L I+ + + ++++D
Sbjct: 376 EFGVKQADVDEVEEESAKLFLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMSKMMVDG 435
Query: 146 GSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGSLLTDFLV 194
G++VN++ AT K+ + + L FSG +T + ++ T F V
Sbjct: 436 GAAVNLMPYATFRKLGRNTEDLIKTNMVLKDFSGNPSDIKGVLNVELTLGNKTIPTSFFV 495
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
+ Y+ +LGR WIH +PST HQ L IE + D++
Sbjct: 496 IDGKGSYSFLLGRDWIHANCCIPSTMHQCLIQWQADKIEIVPADRSV 542
>gi|110288686|gb|AAP52380.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 987
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP G +
Sbjct: 793 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFYGITPQLSSRPL 852
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ + F V + + YNAI+GR + K +QVL
Sbjct: 853 GNITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTELTKFMAASHYAYQVLKMPGPK 912
Query: 231 GIEEIGGDQATTRTC 245
GI I G+ C
Sbjct: 913 GIITIQGNAKLAVQC 927
>gi|38344460|emb|CAE04931.2| OSJNBa0017P10.8 [Oryza sativa Japonica Group]
gi|38345445|emb|CAE03297.2| OSJNBb0046P18.13 [Oryza sativa Japonica Group]
Length = 766
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 30/179 (16%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E S +L+ SP H L I+ + +
Sbjct: 315 PAEFGAKQADVDEVEEAS-----ARLVLSPEQAVFDKPEETENWHLKPLYINGYVNGKPM 369
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------- 188
++++D G+ VN++ AT K+ + + L F G + + G L
Sbjct: 370 SKMMVDGGAVVNLMPYATFRKLGRNAEDLIKMNMALKDFGGNPSETKGVLNVELSVGSKT 429
Query: 189 -LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
T F V+ Y+ +LGR WIH +PST HQ L IE + D++ A
Sbjct: 430 VPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKIEIVPADRSVNVASA 488
>gi|22711559|gb|AAM01165.2|AC113336_17 Hypothetical protein similar to putative retroelement [Oryza sativa
Japonica Group]
Length = 1001
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP G +
Sbjct: 807 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQPFYGITPQLSSRPL 866
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ + F V + + YNAI+GR + K +QVL
Sbjct: 867 GNITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTELTKFMAASHYAYQVLKMPGPK 926
Query: 231 GIEEIGGDQATTRTC 245
GI I G+ C
Sbjct: 927 GIITIQGNAKLAVQC 941
>gi|147773721|emb|CAN67557.1| hypothetical protein VITISV_018420 [Vitis vinifera]
Length = 533
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
C FH + H CR+L+ +E+LI G LK++++ + K Q+ N +
Sbjct: 266 CVFHKEHGHTKETCRSLQYLVEKLIKAGHLKQYLRSDTKGKVTSQHHNPGAPRAPAAPKA 325
Query: 58 SEPEQIVN-TIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD----VQSEVSFL 112
I+N + P E ++R + I + + + + + F
Sbjct: 326 -----IINYSNEGPSDEEYDSRRKRQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFP 380
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI-KPFE 171
P D H DAL++S++IG+ VRRIL+D GSS +++ + V M + KP+
Sbjct: 381 PVDPTRTLQLHRDALILSLEIGDFDVRRILVDPGSSTDLVQASVVSHMGHSLTGLEKPWT 440
Query: 172 QPL 174
P+
Sbjct: 441 NPI 443
>gi|14091845|gb|AAK53848.1|AC016781_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 2014
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 86 KKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDN 145
K+ +++ EE S K + L Q+ + + + ++ H L I+ + + ++++D
Sbjct: 880 KQADVDEVEEESAKLILLPEQA----IFEKPEGTENRHLKPLYINGYVNGKPMSKMMVDG 935
Query: 146 GSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLV 194
G+ VN++ AT K+ + + LI F G ++ + G ++ T F V
Sbjct: 936 GAEVNLMPYATFRKLGRNVEDLIKTNMVLIDFGGNLSETKGVSNVELTVGNKTIPTTFFV 995
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ Y+ +LGR WIH +PST HQ L
Sbjct: 996 IDGNGSYSLLLGRDWIHANCCIPSTMHQCL 1025
>gi|77552282|gb|ABA95079.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1966
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 708 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 815
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREE 926
>gi|62733490|gb|AAX95607.1| RNase H, putative [Oryza sativa Japonica Group]
gi|108709336|gb|ABF97131.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2282
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 86 KKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDN 145
K+ +++ EE S K + L Q+ + + + ++ H L I+ + + ++++D
Sbjct: 1133 KQADVDEVEEESAKLILLPEQA----IFEKPEGTENRHLKPLYINGYVNGKPMSKMMVDG 1188
Query: 146 GSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLV 194
G+ VN++ AT K+ + + LI F G ++ + G ++ T F V
Sbjct: 1189 GAEVNLMPYATFRKLGRNVEDLIKTNMVLIDFGGNLSETKGVSNVELTVGNKTIPTTFFV 1248
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ Y+ +LGR WIH +PST HQ L
Sbjct: 1249 IDGNGSYSLLLGRDWIHANCCIPSTMHQCL 1278
>gi|77553999|gb|ABA96795.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1371
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK------------PF 170
H L + I + R+L+D G++VN++ + +K+ +++K P
Sbjct: 841 HMKPLYLKGHIDGKPITRMLVDGGAAVNLMPYSLFKKLGRGDNELKKTNMIFNDFNGEPT 900
Query: 171 EQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
E I FS +T + +L T F +V YN ILGR WIH VPST HQ L
Sbjct: 901 EAKDI-FSVELTVENKTLPTAFFIVDVQDNYNVILGRCWIHANCCVPSTLHQYL 953
>gi|77554143|gb|ABA96939.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 389
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF P+D + + PH D LVIS ++ VRRIL+D GSS +++ KM L +
Sbjct: 179 QISFGPEDAEGVLFPHQDPLVISAEVAGFEVRRILVDGGSSADVIFAEAYAKMGLPTLAL 238
Query: 168 KPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L GF G +L +V A Q + +P Y+ + C
Sbjct: 239 TQAPASLRGFGGEAV----QVLGQVQLVVAFGTSENRRKEQILFDAVDIPYNYNAIFCRT 294
Query: 228 TIYGIEEI 235
T+ + I
Sbjct: 295 TLNKFDAI 302
>gi|147776381|emb|CAN74201.1| hypothetical protein VITISV_036912 [Vitis vinifera]
Length = 1896
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 505 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVSSVLLDNGSALNVCPLATAIALGYAPSDFG 564
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ V+P
Sbjct: 565 PSTQTVRAYDSTRREVMGTLKIELLIGPATFVVVFQVLRIPTSFNLLLGRPWIHRAGVIP 624
Query: 218 STYHQ 222
S+ HQ
Sbjct: 625 SSLHQ 629
>gi|31430656|gb|AAP52537.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62733437|gb|AAX95554.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|62733455|gb|AAX95572.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
Length = 1383
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVS----FLPQ-----DLKLIQSPHDDALVISIKIGNCLVRRILI 143
P EF K +D E S LP+ +L+ ++ H L I+ + + ++++
Sbjct: 607 PAEFGVKQANVDKVEEESAKLILLPEQAVFENLEGTENRHLKPLYINGYVNGKPMSKMIV 666
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDF 192
D G++VN++ AT K+ + + L F G + + G ++ T F
Sbjct: 667 DGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTF 726
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ Y+ +LGR WIH +PST HQ L
Sbjct: 727 FVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 758
>gi|147768456|emb|CAN71668.1| hypothetical protein VITISV_002492 [Vitis vinifera]
Length = 1146
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 121 SPHDDALVISIKIGNCLVRRI---LIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
S H L ISI CL RR+ L+DNGS++ I AT + P Q + +
Sbjct: 451 SDHTRPLYISI---GCLGRRVPSVLLDNGSALKICHLATAIALGYAPSNFGPSTQTVRAY 507
Query: 178 SGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L +T F V++ + +N +LGR WIH++ V+PS+ HQ
Sbjct: 508 DSTRREVIGTLKIELLIDPTTFVTVFQVLRIPTSFNLLLGRPWIHRVEVIPSSLHQ 563
>gi|48475214|gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1741
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 47/286 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + K D + D +
Sbjct: 612 CPHHPNSNHAAKDCFVYKQFAEQYAKNAR-----KTPDGEQSTSKKKDDDDDPPTGFQDH 666
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A + + + ++ SE++ +K
Sbjct: 667 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIT-----IKFD 714
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 715 RSDHPDRVVHPGRYPLVLDPVVHNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSN 774
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+AILGR + K
Sbjct: 775 APFHGVIPGLSAKPLGQITLPVTFGTRENFRTENVYFEVADFETAYHAILGRSALAKFMA 834
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 835 VPHYTYMMMKMPGPRGVISLRSDIKQAVTC-----DKESCEMAQTR 875
>gi|38346489|emb|CAE03728.2| OSJNBa0021F22.22 [Oryza sativa Japonica Group]
gi|58532093|emb|CAD40054.3| OSJNBa0085C10.6 [Oryza sativa Japonica Group]
Length = 897
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSPHD------DALVISIKIGNCLVRRILI 143
P +F K +D E S L + + + P + L I+ + L+ ++++
Sbjct: 429 PADFGAKQADVDEVEEASARLVLSPEQAIFEKPEGTENWLLNLLYINSYVNGKLMTKMMV 488
Query: 144 DNGSSVNILDDATVEKM-RLEQDKIKP------FEQPLIGFSGIV----TYSDGSLLTDF 192
D G++VN++ T K+ R +D IK F G G++ T S ++ T F
Sbjct: 489 DGGAAVNLMPYVTFRKLGRNTEDLIKTNMVLKDFGGNPSGKKGVLNVELTVSGKTVPTTF 548
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
V+ Y+ +LGR WIH +PST HQ L IE + D + R C
Sbjct: 549 FVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKIEIVPAD-SFIRPC 600
>gi|20043057|gb|AAM08865.1|AC113339_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1627
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 20/174 (11%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L + + + P H +L I+ + + ++++
Sbjct: 684 PAEFGAKQADVDEVEEASTRLILSPEQAVFEKPEGTENRHLKSLYINGYVNGKPMSKMMV 743
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDF 192
D G++VN++ AT K+ + + L F G + + G L T F
Sbjct: 744 DGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPSENKGVLNVELTVDSKTVPTTF 803
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
V+ Y+ +LGR WIH +PST HQ L IE + D++ A
Sbjct: 804 FVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDKIEIVPADRSVNVASA 857
>gi|77549295|gb|ABA92092.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1658
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 43/270 (15%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H H DC KK +E+ ++ KG+ V+ ++ P + E+ ++
Sbjct: 526 CPIHKMDIHSLEDCLVFKKSLEKHMAFEKGKRVRVVEKNEETPPH----------ESDSA 575
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFL 112
P+ ++ H+ Y KRE + E + K+ + ++ F
Sbjct: 576 YPDSDLHV--------SHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFS 627
Query: 113 PQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+D K P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +
Sbjct: 628 EEDHPKTSVIPRRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTD 687
Query: 172 QPLIGFS--------GIVTY-----SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRV 215
QP+ G + G +T + T+ F V + + YNAI+GR + K
Sbjct: 688 QPVHGITPQSLSRPLGKITLPMTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMA 747
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 748 ASHYAYQVLKMPGPKGTITIQGNTKLAVQC 777
>gi|147784827|emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]
Length = 1241
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D I PH D L++++ I + VR L + ++A+ + D +
Sbjct: 1086 ITFPPVDPNRILQPHRDVLILTLGISDFDVRWTL-------SGFNEASTTSL---GDIVL 1135
Query: 169 PFEQ-PLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
P + P+I L F +V SP+NAILG W+H M+ PSTYHQ+
Sbjct: 1136 PVQAGPVI------------LNVQFSMVANLSPFNAILGCAWLHGMKATPSTYHQM 1179
>gi|108864320|gb|ABG22463.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 870
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 44 QNNFLKKDQIENSTSEPEQIV---NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKC 100
++N ++ +Q S E +++V + + AP+ + + E V + ++ EE S K
Sbjct: 656 EDNVVRTNQWCPSAEEAKRLVKGKSVVTAPINMVFTLPAEFGV--DQANVDEVEEESAKL 713
Query: 101 VKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
V L + + P+ I++ H L I+ + + ++++D G++VN++ AT K
Sbjct: 714 V-LSPERAMFEKPEG---IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKF 769
Query: 161 RLEQDKIKPFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQW 209
+ + L F G +T S ++ T F V+ Y+ +LGR W
Sbjct: 770 GRNAEDLIKTNMVLKDFGGNRSETKGVLNVELTVSSKTIPTTFFVIDGKGSYSLLLGRDW 829
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
IH +PST HQ L +E + D++ A
Sbjct: 830 IHANCCIPSTMHQCLIQWQGDKVEIMPADRSVNVASA 866
>gi|49328062|gb|AAT58762.1| putative polyprotein [Oryza sativa Japonica Group]
gi|49328085|gb|AAT58784.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1178
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + Q K+ P +QP F GI S
Sbjct: 439 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSKLTPTDQP---FHGITPQSSS 495
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
L F V + + YNAI+GR + K +QVL
Sbjct: 496 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVL 552
>gi|78708102|gb|ABB47077.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1663
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 20/174 (11%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L + + + P H +L I+ + + ++++
Sbjct: 684 PAEFGAKQADVDEVEEASTRLILSPEQAVFEKPEGTENRHLKSLYINGYVNGKPMSKMMV 743
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDF 192
D G++VN++ AT K+ + + L F G + + G L T F
Sbjct: 744 DGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPSENKGVLNVELTVDSKTVPTTF 803
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
V+ Y+ +LGR WIH +PST HQ L IE + D++ A
Sbjct: 804 FVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDKIEIVPADRSVNVASA 857
>gi|77553900|gb|ABA96696.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 112 LPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
L +D + I PH D LVIS +I + VRRIL+D G+S +++ T KM L +
Sbjct: 310 LLEDAEGIMFPHQDPLVISAEIASFEVRRILVDGGTSADVIFAGTYAKMGLPTLSLTQAP 369
Query: 172 QPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVV 216
L GF G +V + G + F +V YNAI G ++K +
Sbjct: 370 VSLRGFGGEAVQVLGQAQLLVAFGTGENRREEQILFDMVDIPYNYNAIFGGATLNKFEAI 429
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTCASNG 249
+ L + G+ + G QA + AS G
Sbjct: 430 SHHNYLELKMPGLIGVIVVKGLQA---SAASKG 459
>gi|32483243|emb|CAE02544.1| OSJNBb0069N01.4 [Oryza sativa Japonica Group]
gi|38344507|emb|CAE05186.2| OSJNBa0013A04.23 [Oryza sativa Japonica Group]
Length = 1235
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 50/273 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLK-----EFVKVEDKQ-PQN----------- 43
C +HN H T DC+ ++ I+ I +G++K +KV+D P N
Sbjct: 43 CNWHNTGSHTTNDCKVFRQQIQSAIEQGKIKFDDSKRPMKVDDHPFPVNMVHTSGTAADG 102
Query: 44 ---QNNFLKKDQIENSTSEPEQ--IVNTIMAPLPLEVHMTKE------------RNVYCK 86
+N+ L +I N ++ + + ++ +E K V+
Sbjct: 103 RSHRNSQLNSVRIINKYQRRQEWRVKSKVLTADEVEADKAKRLMKGKAVASSSVNMVFIL 162
Query: 87 KREIEAPE----EFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRIL 142
E EA + + + KL + E + + +++++ H L + + + +++
Sbjct: 163 LAEFEANQADAADMEEASAKLVLSPERAIFEKP-EVVENRHLKPLYVKGFVNGKPMSKMM 221
Query: 143 IDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTD 191
+D G++VN++ AT K+ D + L F G + + G L T
Sbjct: 222 VDGGAAVNLMPYATFRKLGKNADDLIKTNVVLNDFGGNPSENKGVLNVELTIGSKTDPTT 281
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 282 FFVIDGKGSYSMLLGRDWIHANCCIPSTMHQSL 314
>gi|51038037|gb|AAT93841.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1739
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + L+ ++++D G++VN++ AT K+ + + L F G +
Sbjct: 691 HLKPLYINGYVNGKLMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 750
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T FLV+ Y+ LGR WIH +PST HQ L
Sbjct: 751 ETKGVLNVGLTVGSKTIPTTFLVIDGKGSYSLFLGRDWIHANCCIPSTMHQCL 803
>gi|21672054|gb|AAM74416.1|AC120497_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1781
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 20/174 (11%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L + + + P H +L I+ + + ++++
Sbjct: 677 PAEFGAKQADVDEVEEASTRLILSPEQAVFEKPEGTENRHLKSLYINGYVNGKPMSKMMV 736
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDF 192
D G++VN++ AT K+ + + L F G + + G L T F
Sbjct: 737 DGGAAVNLMPYATFRKLGGNSEDLIKTNMVLKDFGGNPSENKGVLNVELTVDSKTVPTTF 796
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
V+ Y+ +LGR WIH +PST HQ L IE + D++ A
Sbjct: 797 FVIDRKGSYSLLLGRDWIHANCCIPSTMHQSLIQWQGDKIEIVPADRSVNVASA 850
>gi|359481118|ref|XP_003632571.1| PREDICTED: uncharacterized protein LOC100854783 [Vitis vinifera]
Length = 2085
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 497 DRATCIVFFADDLPPEGSDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATTIALGFA 556
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHK 212
P Q + + G+L D L V++ + +N +LGR WIH+
Sbjct: 557 PSDFGPSTQTVRAYDSTQREVMGTLTMDLLIDPTTFSILFQVLRIPASFNLLLGRPWIHQ 616
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 617 AGAIPSSLHQ 626
>gi|147792148|emb|CAN72987.1| hypothetical protein VITISV_005625 [Vitis vinifera]
Length = 447
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 148 SVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL----TDFLVVKA---TSP 200
+++I +DA + KM ++ L GF+G T S G ++ + +++ SP
Sbjct: 149 TLDIENDALLCKMGFLPSALENSGHVLSGFNGASTTSLGDIVLPIKVELVILNVQLDLSP 208
Query: 201 YNAILGRQWIHKMRVVPSTYHQV 223
+N I+GR W+H M+V+PSTYHQ+
Sbjct: 209 FNVIMGRTWLHDMKVIPSTYHQM 231
>gi|62732709|gb|AAX94828.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62734472|gb|AAX96581.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550394|gb|ABA93191.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1205
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E S KLI SP H L I+ + +
Sbjct: 777 PAEFGTKQADIDELEEES-----AKLILSPEQAVFEKPEGTENRHLKPLYINGYVNGKPM 831
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGS 187
++++D G++VN++ AT K+ + + L F G +T + +
Sbjct: 832 SKMMVDGGAAVNLIPYATFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGNKT 891
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 892 IPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 928
>gi|34761728|gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
V F DL H+ AL I+++ ++ +L+D GSS+N+L ++K+ +E +
Sbjct: 811 VGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPKQILKKIDVEGFVLT 870
Query: 169 P-------FEQPLIGFSGIVTY--SDGSLLTD--FLVVKATSPYNAILGRQWIHKMRVVP 217
P F++ G VT G + D F V+ Y+ +LGR WIH V
Sbjct: 871 PSDLIVRAFDRSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSCLLGRPWIHAAGAVS 930
Query: 218 STYHQVLCY------QTIYGIEEI 235
ST HQ L Y T+ G EEI
Sbjct: 931 STLHQKLKYVWNGQIVTVCGEEEI 954
>gi|110288766|gb|AAP52584.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1486
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 49/252 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H +H DC KK +E+ ++ KG+ V+ ++ P + E ++
Sbjct: 556 CPIHKTDKHSLEDCIGFKKSLEKHMAFEKGKRVRVVEKNEEMPPH----------EPDSA 605
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFL 112
P+ ++ H+ Y KRE + E + K+ + ++ F
Sbjct: 606 YPDSDLHV--------SHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFS 657
Query: 113 PQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+D K P +V+ I N V R+LID GSS+N+L +T++ M L Q ++ P +
Sbjct: 658 EEDHPKTSVIPGRYPIVVEPTIQNIKVARVLIDGGSSINLLCTSTLDAMGLPQSELTPTD 717
Query: 172 QPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHK 212
QP F GI S L F V + + YN I+GR + K
Sbjct: 718 QP---FHGITPQSSSRPLGKITLPMTFGQANNFRTEQITFDVAEFDTAYNTIIGRTALAK 774
Query: 213 MRVVPSTYHQVL 224
+QVL
Sbjct: 775 FMAASHYAYQVL 786
>gi|34015109|gb|AAQ56307.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1672
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 81 RNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRR 140
+N + E++A EE S + V Q++ + + ++ H AL I+ + + +
Sbjct: 614 KNKHAAADEVKADEEASARLVLSPEQADF----EKPEGTENRHLKALYINGYVNGKPMSK 669
Query: 141 ILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLL 189
+++D G++VN++ A K+ + + L F G + + G ++
Sbjct: 670 MMVDGGAAVNLIPYAKFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIP 729
Query: 190 TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCAS 247
T F V+ Y+ +LGR WIH +PST HQ L +E + D++ A+
Sbjct: 730 TTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDKLEIVPADRSVNVASAN 787
>gi|77555405|gb|ABA98201.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2107
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I++ H L I+ + + ++++D G++VN++ AT K+ + + L F
Sbjct: 933 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFG 992
Query: 179 GIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G + S G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 993 GNPSESKGVLNMELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQW 1052
Query: 228 TIYGIEEIGGDQATT 242
IE + D T
Sbjct: 1053 QGDKIEIVPADSQLT 1067
>gi|108862185|gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1472
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
V+ ++SF P+D + + PH D LVIS ++ VRRIL+D GS +++ KM L
Sbjct: 507 VRKKISFEPEDAEGVLFPHQDPLVISAEVAGFEVRRILVDGGSLADVIFAEAYAKMGLPT 566
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSL-------LTD--------FLVVKATSPYNAILGRQW 209
+ L GF G V G + +++ F +V YNAI R
Sbjct: 567 LALTQAPALLRGFGGEVVQVLGQVQLVVAFGISENRREEQILFDIVDIPYNYNAIFSRAT 626
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATT 242
++K + + L G+ + G Q +T
Sbjct: 627 LNKFEAISHHNYLKLTMPGPIGVIVVKGLQPST 659
>gi|14018058|gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 2079
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T+E M + Q ++ P +QP F GI S
Sbjct: 872 IVVEPTIRNIKVARVLIDGGSSINLLFASTLEAMGIPQSELTPTDQP---FHGITPQSSS 928
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + + YNAI+GR + K +QVL
Sbjct: 929 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFVAASHYAYQVLKMP 988
Query: 228 TIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 989 GPKGTITIQGNAKLAVQC 1006
>gi|22857591|gb|AAN09865.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1469
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 49/252 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS 58
C H +H DC KK +E+ ++ KG+ V+ ++ P + E ++
Sbjct: 539 CPIHKTDKHSLEDCIGFKKSLEKHMAFEKGKRVRVVEKNEEMPPH----------EPDSA 588
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFL 112
P+ ++ H+ Y KRE + E + K+ + ++ F
Sbjct: 589 YPDSDLHV--------SHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFS 640
Query: 113 PQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+D K P +V+ I N V R+LID GSS+N+L +T++ M L Q ++ P +
Sbjct: 641 EEDHPKTSVIPGRYPIVVEPTIQNIKVARVLIDGGSSINLLCTSTLDAMGLPQSELTPTD 700
Query: 172 QPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIHK 212
QP F GI S L F V + + YN I+GR + K
Sbjct: 701 QP---FHGITPQSSSRPLGKITLPMTFGQANNFRTEQITFDVAEFDTAYNTIIGRTALAK 757
Query: 213 MRVVPSTYHQVL 224
+QVL
Sbjct: 758 FMAASHYAYQVL 769
>gi|11967913|dbj|BAB19768.1| putative gypsy-type retrotransposon RIRE2 [Oryza sativa Japonica
Group]
Length = 983
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 110/273 (40%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H H +DC K++ E+ + K K D + Q KKD +++ +
Sbjct: 661 CPHHPKSNHVAKDCFVYKQFAEQYV-----KNARKPSDGE---QGTSKKKDDEDDAPTGF 712
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R + EI A + + + ++ SE++ +
Sbjct: 713 QDHRKELNHIFGGPLAYE----SKRKQKLTEWEINAVQPNTPQYLRW---SEIA-----I 760
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 761 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 820
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 821 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENSRTKNVCFEVADFETAYHAILGRPALAK 880
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 881 FMAVPHYTYMMMKMPGPRGVISLWSDIKQAVTC 913
>gi|218190632|gb|EEC73059.1| hypothetical protein OsI_07016 [Oryza sativa Indica Group]
Length = 537
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + +++ + + +E
Sbjct: 204 CSVHNTSLHDLTDCRAVKNLAERTRKWEEDRRQERREGKSPAVPSGNRRREAKQKAPAED 263
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R+ KRE+ A + + ++ S
Sbjct: 264 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSFKAMKRELLAAAP-THEAMRRARWS 319
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NIL A +
Sbjct: 320 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDA 374
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 375 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 433
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 434 LGRPALVKFMAAVHYAYLQM 453
>gi|62732823|gb|AAX94942.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550210|gb|ABA93007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 646
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 35/260 (13%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H +H DC KK +E+ ++ + K V+V +E +T
Sbjct: 347 CPIHKSDKHSLDDCLVFKKSLEKQLALEKGKR-VRV----------------VEKATEAT 389
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLP 113
Q +++ L V H+ Y KRE + E + K+ + ++ F
Sbjct: 390 TQDLDSAYLDSDLHVSHIFGGSTAYYSKREYKKMEREVCSTWQGAAPKMKWSEQKIEFSD 449
Query: 114 QD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+D K P +V+ I N V R+LID GSS+N+ T++ M + + ++ P Q
Sbjct: 450 EDHPKAAIIPGRYPIVVEPTIRNIKVARVLIDGGSSINLFFACTLDVMGIPRSELTPTNQ 509
Query: 173 PLIGFSGIVTYSDGSLL-------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
P F GI S L F V + + YNAI+GR + K +QVL
Sbjct: 510 P---FHGITPQSSSKPLGKITLPHITFDVAEFDTAYNAIIGRNALAKFMAASHYAYQVLK 566
Query: 226 YQTIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 567 MPGPKGTITIQGNAKLAVQC 586
>gi|50540732|gb|AAT77888.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108710900|gb|ABF98695.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1251
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
N + AP+ + + E + + +++ EE S K V Q+E + + + H
Sbjct: 645 NVVAAPINMVFTLPAEFGI--DQADVDEVEERSAKLVLSPEQAEF----EKPEGTGNRHL 698
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
L I+ + + ++++D G++VN++ AT +K+ + + L F G + +
Sbjct: 699 KPLYINGYVNGKSMSKMMVDGGAAVNLMPYATFKKLGRNAEDLIKTNMVLKDFGGNPSET 758
Query: 185 DG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 759 RGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 809
>gi|77555500|gb|ABA98296.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1312
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
+ +MAP+ + + E + + +++ EE S K V L + V P+ ++ H
Sbjct: 743 SVVMAPVNMVFTLPAEFGI--DQADVDEVEEESAKLV-LSPEQAVFEKPEG---TENRHL 796
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
L I+ + + ++++D G++VN++ AT K+ + + L F G + +
Sbjct: 797 KPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPSET 856
Query: 185 DG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 857 KGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHASCCIPSTMHQCL 907
>gi|147807325|emb|CAN66312.1| hypothetical protein VITISV_027164 [Vitis vinifera]
Length = 836
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 57 TSEPEQI-VNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
TS PE+I V T +P L +HM C + F D
Sbjct: 451 TSAPEEIRVKTTTSPEGL-IHMMTVDRAMC-----------------------IVFSEDD 486
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
L S H +L IS+ + V +L+DNGS++N+ AT + P Q +
Sbjct: 487 LPPGGSNHTRSLYISVGCSSRRVPSVLLDNGSALNVCPLATAIALGYALFNFGPSTQTVR 546
Query: 176 GFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+ G+L + L V++ + +N +LGR WIH+ +PS++HQ
Sbjct: 547 AYDSTRREVMGTLEIELLIGPTTFVAVFQVLRIPTSFNLLLGRPWIHRAGAIPSSFHQ 604
>gi|89179457|gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1146
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S HD L IG+ V RI +D GS+V+I+ + + + K+ + GF+
Sbjct: 6 SNHDRPLYFIGYIGSNKVNRIQVDPGSAVSIMPLRLMHSLGIPVSKLASTGTVIYGFNSS 65
Query: 181 VTYSDGSL-----LTDF------LVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+ G + + D V+ A + YN +LGR WIH ++PST HQ L Y
Sbjct: 66 GSRPLGKIRIKCQMGDLKTEVTCYVIDAETSYNLLLGRPWIHSNVIIPSTLHQCLKY 122
>gi|147815296|emb|CAN61240.1| hypothetical protein VITISV_016131 [Vitis vinifera]
Length = 1755
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRI---LIDNGSSVNILDDATVEKM 160
D + + F DL S H L I++ CL R++ L+DNGS++N+ A +
Sbjct: 588 DRATCIVFSDDDLPPEGSDHVRPLYITVV---CLGRKVPSVLLDNGSALNVYPLAIAIAL 644
Query: 161 RLEQDKIKPFEQPLIGFS------GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMR 214
P Q + + G T+S T F V++ + +N +LGR WIH++R
Sbjct: 645 GFAPSDFGPSTQIVRAYDSTKREIGPTTFS-----TLFQVLRILASFNLLLGRPWIHRVR 699
Query: 215 VVPSTYHQ 222
V+PS+ HQ
Sbjct: 700 VIPSSLHQ 707
>gi|147819110|emb|CAN71226.1| hypothetical protein VITISV_034453 [Vitis vinifera]
Length = 1769
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRI---LIDNGSSVNILDDATVEKM 160
D + ++F DL S H L I + CL RR+ L+DNGS++N+ T +
Sbjct: 506 DRATCIAFSDDDLPPEGSNHVRPLFIDVA---CLGRRVPSVLLDNGSALNVCPLVTAIVL 562
Query: 161 RLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAILGRQW 209
D P Q + + G G+L T F V++ S +N +LGR W
Sbjct: 563 GFSPDDFGPSTQTVRAYDGTQKTVMGTLSTHVMIGPVSYSIVFQVLRIQSSFNLLLGRPW 622
Query: 210 IHKMRVVPSTYHQ 222
IH+ +P + HQ
Sbjct: 623 IHEAGAIPYSLHQ 635
>gi|147774448|emb|CAN63397.1| hypothetical protein VITISV_010233 [Vitis vinifera]
Length = 355
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 157 VEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAIL 205
KM ++ + L F+G S G +L F VV+ S + AI+
Sbjct: 104 AAKMSYSPSALENLGRLLFEFNGATKTSQGDVVLPVQVGPVTLNVQFSVVEDLSHFCAIM 163
Query: 206 GRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
GR W+HKM+VVPSTYH+++ Y T G ++ G C
Sbjct: 164 GRAWLHKMKVVPSTYHEMVSYLTENGQVDLLGSHLAACQC 203
>gi|147858290|emb|CAN83915.1| hypothetical protein VITISV_022301 [Vitis vinifera]
Length = 2174
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L IS+ V + +DNGS++N+ AT +
Sbjct: 643 IVFSDDDLPLEGSDHTRPLYISVGCSGRRVPSVFLDNGSALNVCPLATAIALGYAPSDFG 702
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 703 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 762
Query: 218 STYHQ 222
S+ HQ
Sbjct: 763 SSLHQ 767
>gi|38344380|emb|CAE02238.2| OSJNBb0054B09.2 [Oryza sativa Japonica Group]
gi|116309070|emb|CAH66179.1| OSIGBa0130O15.3 [Oryza sativa Indica Group]
gi|116309097|emb|CAH66204.1| OSIGBa0148D14.10 [Oryza sativa Indica Group]
Length = 1992
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 110/283 (38%), Gaps = 36/283 (12%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKK----DQIENS 56
C H + H +DC K++ ++ + K K + + KK D
Sbjct: 656 CPHHPNSNHVAKDCFIYKQFADQ---------YTKTTRKNSDEEQSTSKKKDDGDAPAGF 706
Query: 57 TSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL-DVQSEVSFLPQD 115
++ + PL E +R +REI A + + + ++ ++ + L
Sbjct: 707 QDHRTELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRWSEIAIKFDRLDHP 762
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
+++ P LV+ + N +RR LID GS++NIL T++ M++ + ++KP P
Sbjct: 763 DRVVH-PGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFH 821
Query: 176 G-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
G G+ G + F V + Y+AILGR + K VP
Sbjct: 822 GVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHY 881
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
+ ++ G+ + D TC Q RE+ S R
Sbjct: 882 TYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQIREMASAR 924
>gi|77551588|gb|ABA94385.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1700
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ D + L F G +
Sbjct: 809 HLKPLYINRFVNGKPMSKMMVDGGAAVNLMPYATFRKLGRSADDLIKMNMVLKDFGGNPS 868
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G L T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 869 ETKGVLNVELTVGNKIVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 921
>gi|147800365|emb|CAN62141.1| hypothetical protein VITISV_038647 [Vitis vinifera]
Length = 2068
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 586 IVFSDDDLPPEGSGHTHPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSNFG 645
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ +P
Sbjct: 646 PSTQTVRAYDSTRKEVMGTLEIELLIGTTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 705
Query: 218 STYHQ 222
S+ HQ
Sbjct: 706 SSLHQ 710
>gi|147767517|emb|CAN66714.1| hypothetical protein VITISV_041527 [Vitis vinifera]
Length = 2066
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 562 DRATCIXFSADDLPPEGSDHTRPLYITVXCSGHRVPSVLLDNGSALNVCPLATAIALGFA 621
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHK 212
P Q + + G+L D L V++ + +N +LGR WIH+
Sbjct: 622 PSDFGPSTQTVRAYDXTQREVMGTLTIDLLIGPTTFSILFQVLRIPASFNLLLGRPWIHQ 681
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 682 AGAIPSSLHQ 691
>gi|147799850|emb|CAN68356.1| hypothetical protein VITISV_040050 [Vitis vinifera]
Length = 116
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 202 NAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
NAI GR W+HKM+V+PS YHQ++ Y T G + G Q R C
Sbjct: 48 NAIKGRPWLHKMKVIPSMYHQMVSYLTEVGQTNLLGSQLAMRQC 91
>gi|38605744|emb|CAE03836.3| OSJNBb0013J13.13 [Oryza sativa Japonica Group]
Length = 1836
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 422 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERCEGKTPAAPAGNRRGEAKQKATAED 481
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 482 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 537
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL +
Sbjct: 538 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPLAFDA 592
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 593 IKAPGMVLRP-SQPIIGVTPGNTWPLGHIDLPVTFGGSANFRMEWVDFDVADLSLPYNAV 651
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 652 LGRPALVKFMAAVHYAYLQM 671
>gi|62733054|gb|AAX95171.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gi|77549581|gb|ABA92378.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 2041
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 102/273 (37%), Gaps = 49/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC KK + + ++ + K+ VE K ++ S+
Sbjct: 1016 CPIHKSNRHTLEDCLVFKKSLAKHMALEKGKQVHVVE-----------KDAEVATQESDS 1064
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD-VQSEVSFLPQDLKLI 119
+ + + H+ Y KRE + E + C ++ + Q +K
Sbjct: 1065 AYLDSDLHV-----SHIFGGSTAYSSKREYKKVER--EVCSTWQGAAPKMKWSEQKIKFS 1117
Query: 120 QSPHDDALVISIK--------IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+ H VI + I N V R+LI+ GSS+N+L +T++ M + + ++ P +
Sbjct: 1118 EEDHPKTAVIPGRYPIVVEPTIRNIKVARVLINGGSSINLLFASTLDAMGIPRSELTPTD 1177
Query: 172 QPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHK 212
QP F GI S L F V + + YNAI+GR + K
Sbjct: 1178 QP---FHGITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAK 1234
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL + G I G+ C
Sbjct: 1235 FMAASHYAYQVLKMPGLKGTITIQGNAKLAVQC 1267
>gi|108705719|gb|ABF93514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 776
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C+ HN H DCR +K E + + + E K P + + + + +
Sbjct: 475 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERCEGKAPAAPAGNRRGEAKQKAPAED 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EPE + T+ H ++ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDNLGFQEPEATIATVDG--GACAHASR-RSLKAMKRELLA-AAPTHEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
GR + K M V Y Q+
Sbjct: 705 RGRPALVKFMAAVHYAYLQM 724
>gi|19920117|gb|AAM08549.1|AC092749_2 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
gi|21672074|gb|AAM74436.1|AC123594_19 Hypothetical protein similar to putative retroelements [Oryza
sativa Japonica Group]
gi|31431423|gb|AAP53204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 483
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF-SGIVTYSD 185
LV+ + N +RR LID GS++NIL T++ M++ + ++KP P F G+ +
Sbjct: 287 LVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSSAPFHRFIPGLSSTPL 346
Query: 186 G--SLLTDFL-------------VVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
G +LL F V + Y+AILGR + K VVP ++++
Sbjct: 347 GQITLLVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMVVPHYIYRMMKMPGPR 406
Query: 231 GIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G+ + D T TC K++ E+ TR
Sbjct: 407 GVISLRSDIKQTVTC-----DKESCEMAQTR 432
>gi|147859498|emb|CAN79257.1| hypothetical protein VITISV_031980 [Vitis vinifera]
Length = 496
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D I PH D L++S++IG+ VRRIL+D GSS +++ + + M
Sbjct: 355 IDGTIIFPPVDPTRILQPHRDTLILSLEIGDFDVRRILVDPGSSADLVQASVISHMGRSL 414
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKA 197
++ + + GF+G T S G ++ L+V+A
Sbjct: 415 TGLENPGRIIFGFNGASTTSLGDIV---LLVQA 444
>gi|147795510|emb|CAN67750.1| hypothetical protein VITISV_034322 [Vitis vinifera]
Length = 1347
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L I++ V +L+DNGS +NI T + +
Sbjct: 459 IVFSDYDLPLEGSNHTRPLYITVGCSGHRVPSVLLDNGSVLNICPLTTTIALSYALLEFS 518
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSP-----------YNAILGRQWIHKMRVVP 217
P Q + + G+L+ + L+ T P +N +LGR WIH++ +P
Sbjct: 519 PSAQTVKAYDSTKRKVMGTLMIELLIGPTTFPILFQVFKIPTSFNLLLGRPWIHRVGDIP 578
Query: 218 STYHQ 222
S+ HQ
Sbjct: 579 SSLHQ 583
>gi|62732906|gb|AAX95025.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 695
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 102/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 362 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 421
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R+ KRE+ A + + + S
Sbjct: 422 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSFKAMKRELLAAAP-THEATRRARWS 477
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NIL A +
Sbjct: 478 EVT-----LTFDQTDHPPCIARGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDA 532
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 533 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 591
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 592 LGRPALVKFMAAVHYAYLQM 611
>gi|147781100|emb|CAN62911.1| hypothetical protein VITISV_036452 [Vitis vinifera]
Length = 2129
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L IS+ V + +DNGS++N+ AT +
Sbjct: 619 IVFSDDDLPLEGSGHTRPLYISVGCSGRRVPSVFLDNGSALNVGPLATTIALGYAPSDFG 678
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ +P
Sbjct: 679 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 738
Query: 218 STYHQ 222
S+ HQ
Sbjct: 739 SSLHQ 743
>gi|28927675|gb|AAO62321.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 1665
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 102/272 (37%), Gaps = 47/272 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC KK +E+ ++ + K V K E + EP
Sbjct: 376 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVCVV-------------KTNKETTPHEP 422
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLP 113
+ + L V H+ Y KRE + E + K+ + ++ F
Sbjct: 423 D----SAYPDSDLHVSHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFSE 478
Query: 114 QD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+D K P + + I N V R+LID GSS+N+L +T++ M + Q+++ P +Q
Sbjct: 479 EDHPKTAVIPGRYPIAVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQNELTPTDQ 538
Query: 173 PLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKM 213
P F GI S L F V + + YNAI+GR + K
Sbjct: 539 P---FHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKF 595
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+Q+L G I G+ C
Sbjct: 596 MAASHYAYQMLKMPGPKGTITIQGNTKLVVQC 627
>gi|20177620|gb|AAM14675.1|AC097446_4 Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|22725915|gb|AAN04925.1| Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|31430219|gb|AAP52165.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1094
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 106 QSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
++ +S+L + + + P H L I+ + + ++++D G++VN++ AT +K
Sbjct: 441 RNRLSWLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMPKMMVDGGAAVNLMPYATFKK 500
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQ 208
+ + + L F G + + G ++ T F V+ Y+ +LGR
Sbjct: 501 LGRNAENLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRD 560
Query: 209 WIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRT 244
WIH +PST HQ L IE + D+ T+
Sbjct: 561 WIHANCCIPSTMHQCLIQWQGNKIEIVPADRWRTQA 596
>gi|77551287|gb|ABA94084.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1756
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 50/274 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENST--- 57
C H + H +DC K+++E+ +VK K KK E+
Sbjct: 632 CPHHPNSNHVAKDCFVYKQFVEQ---------YVKNARKPSDGDQGTSKKKDGEDDVPLG 682
Query: 58 --SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
+++++ PL E +R +REI A + + + ++ SE++
Sbjct: 683 FQDHRKELIHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA----- 730
Query: 116 LKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+K +S H D LV+ + N ++R LID S++NIL T++ M++ + ++
Sbjct: 731 IKFDRSDHPDRVVHPGRYPLVLYPVVRNVKLQRTLIDGSSALNILFAKTLDDMQIPRTEL 790
Query: 168 KPFEQP----LIGFSGI--------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIH 211
KP P ++G S VT+ + + T+ F V + Y+AILGR +
Sbjct: 791 KPSNAPFHGVILGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETTYHAILGRPALA 850
Query: 212 KMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
K VP + ++ G+ + D TC
Sbjct: 851 KFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC 884
>gi|147844453|emb|CAN80009.1| hypothetical protein VITISV_024812 [Vitis vinifera]
Length = 825
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 79/245 (32%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK---QPQNQNNFLKKDQIENST 57
CA+H + CR+L +E LI G LK++++ E + P+N + + I
Sbjct: 266 CAYHKE------RCRSLHYLVERLIKAGHLKQYLRSEARVRDTPRNSDPGTSRTPIA--- 316
Query: 58 SEPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
P+ ++N I PL E + ++R + + E F
Sbjct: 317 --PKVVINYIHGGPLDEEYNSKRKRQRLLRAASVR--ERF-------------------- 352
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
NC+ L+ N +M LE +K + L G
Sbjct: 353 ------------------NCIWPGALVIN-------------QMGLELSGLKNPGRILSG 381
Query: 177 FSGIVTYS-----------DGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
F+G T S +L F +V+ P+N LGR W+H M+ +PSTYHQ+
Sbjct: 382 FNGAATTSFIDIVLSVQAGPITLNVQFSMVEDLPPFNVSLGRTWLHYMKTIPSTYHQMRL 441
Query: 226 YQTIY 230
I+
Sbjct: 442 MTKIF 446
>gi|20177627|gb|AAM14682.1|AC097446_11 Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|22725922|gb|AAN04932.1| Putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|31430226|gb|AAP52172.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1094
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 106 QSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
++ +S+L + + + P H L I+ + + ++++D G++VN++ AT +K
Sbjct: 441 RNRLSWLSPEQAVFEKPEGTENRHLKPLYINGYVNGKPMPKMMVDGGAAVNLMPYATFKK 500
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQ 208
+ + + L F G + + G ++ T F V+ Y+ +LGR
Sbjct: 501 LGRNAENLIKTNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRD 560
Query: 209 WIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRT 244
WIH +PST HQ L IE + D+ T+
Sbjct: 561 WIHANCCIPSTMHQCLIQWQGNKIEIVPADRWRTQA 596
>gi|108708395|gb|ABF96190.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1602
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 102/272 (37%), Gaps = 47/272 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC KK +E+ ++ + K V K E + EP
Sbjct: 313 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVCVV-------------KTNKETTPHEP 359
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLP 113
+ + L V H+ Y KRE + E + K+ + ++ F
Sbjct: 360 D----SAYPDSDLHVSHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFSE 415
Query: 114 QD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+D K P + + I N V R+LID GSS+N+L +T++ M + Q+++ P +Q
Sbjct: 416 EDHPKTAVIPGRYPIAVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQNELTPTDQ 475
Query: 173 PLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKM 213
P F GI S L F V + + YNAI+GR + K
Sbjct: 476 P---FHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKF 532
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+Q+L G I G+ C
Sbjct: 533 MAASHYAYQMLKMPGPKGTITIQGNTKLVVQC 564
>gi|359475743|ref|XP_003631748.1| PREDICTED: uncharacterized protein LOC100854902 [Vitis vinifera]
Length = 1829
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ + V +L+DNGS++N+ AT +
Sbjct: 285 IVFSDDDLPPEGSGHTRPLYISVGCSSRRVSSVLLDNGSALNVCPLATAIALGYAPSDFG 344
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 345 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 404
Query: 218 STYHQ 222
S+ HQ
Sbjct: 405 SSLHQ 409
>gi|147834845|emb|CAN68307.1| hypothetical protein VITISV_034582 [Vitis vinifera]
Length = 1881
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L ISI V +L+DNGS++N+ AT +
Sbjct: 471 IVFSDDDLPPEGSGHTRPLYISIGCSGRRVPSVLLDNGSALNVCLLATAIALEYAPSDFG 530
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ +P
Sbjct: 531 PSTQTVRAYDSTRREVMGTLEIELLIGPSTFITIFQVLRIPTSFNLLLGRPWIHQAGAIP 590
Query: 218 STYHQ 222
S+ HQ
Sbjct: 591 SSLHQ 595
>gi|19881697|gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Japonica Group]
gi|31431128|gb|AAP52950.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1367
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++SF D + + PH D LVIS +I VRRIL+D SS +++ KM L
Sbjct: 494 LNQQISFGLGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGESSADVIFAEAYAKMGLTT 553
Query: 165 DKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQW 209
I P L GF G +V + G + F VV YNAI GR
Sbjct: 554 QAITPAPALLRGFGGEAVQVLGQAQLMVAFGTGENRREEQVLFDVVDIPYNYNAIFGRAT 613
Query: 210 IHKMRVVPSTYHQVL 224
++K + ++H L
Sbjct: 614 LNKFEAI--SHHNYL 626
>gi|359474674|ref|XP_003631510.1| PREDICTED: uncharacterized protein LOC100243172 [Vitis vinifera]
Length = 2076
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 753 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 812
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH++ +P
Sbjct: 813 PTTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRVGAIP 872
Query: 218 STYHQ 222
S+ HQ
Sbjct: 873 SSLHQ 877
>gi|55168117|gb|AAV43984.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168193|gb|AAV44059.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1681
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L ++ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 752 HHKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKHFGGNPS 811
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L +
Sbjct: 812 ETKGVLNVELTVGSKTIPTTFFVIDGKRSYSLLLGRDWIHTNCCIPSTMHQCLIQWQGHK 871
Query: 232 IEEIGGD 238
IE + D
Sbjct: 872 IEVVPAD 878
>gi|46485805|gb|AAS98430.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2004
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEK---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 713 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 820
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 931
>gi|32489193|emb|CAE04378.1| OSJNBa0027G07.20 [Oryza sativa Japonica Group]
gi|38347087|emb|CAE02559.2| OSJNBa0006M15.2 [Oryza sativa Japonica Group]
Length = 462
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN + DCR +K E + + + E K P + + + + +E
Sbjct: 129 CSVHNTSLYDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKAPAED 188
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P+ V T+ H ++ R++ KRE+ A + + + S
Sbjct: 189 VDDGDDNLGFQEPQATVATVDGGA--CAHASR-RSLKAMKRELLAAAP-THEATRRARWS 244
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NIL A +
Sbjct: 245 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDA 299
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 300 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVNFGGSANFRTERVNFDVADLSLPYNAV 358
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 359 LGRPALVKFMAAVHYAYLQM 378
>gi|21672028|gb|AAM74390.1|AC119149_5 Putative retroelement [Oryza sativa Japonica Group]
Length = 1123
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++SF P D + + PH D+LVIS +I V+RIL+D GSS +++ KM L
Sbjct: 20 LNQQISFGPGDAEGVMFPHQDSLVISAEIAGLEVQRILVDGGSSADVIFAEAYAKMGLST 79
Query: 165 DKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQW 209
+ L GF +V + G + F VV YNAI G
Sbjct: 80 LALTLAPASLRGFDREAVQVLGLTQLLVAFGTGENRREEQVLFDVVDIPYNYNAIFGHAT 139
Query: 210 IHKMRVV 216
++K +
Sbjct: 140 LNKFEAI 146
>gi|46391119|gb|AAS90646.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1991
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEK---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 713 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 820
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREE 931
>gi|116308914|emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]
Length = 1009
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 53/289 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H + C K++ E+ + K D +Q KKD +++ +
Sbjct: 77 CPHHPNSNHAAKYCFIYKQFTEQYAKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 128
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI + + + ++ SE++ +
Sbjct: 129 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINVVQPNTPQYLRW---SEIA-----I 176
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 177 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELK 236
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + YNAILGR + K
Sbjct: 237 PSNAPFHGVIPGLSATPLGQITLPVTFGTQENFRTEKVCFEVADFETAYNAILGRPALAK 296
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 297 FMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTC-----DKESCEMAQTR 340
>gi|147838301|emb|CAN74448.1| hypothetical protein VITISV_042601 [Vitis vinifera]
Length = 2254
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSNFG 766
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ +P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAIP 826
Query: 218 STYHQ 222
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|218201795|gb|EEC84222.1| hypothetical protein OsI_30637 [Oryza sativa Indica Group]
Length = 520
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + +++ + + +E
Sbjct: 187 CSVHNTSLHDLADCRAVKNLAERTRKWEEDRRQERREGKSPAVPSGNRRREAKQKAPAED 246
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREI--EAPEEFSKKCVKLDV 105
P + T+ V R KRE+ AP + + +
Sbjct: 247 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRRFKAMKRELLAAAPTHEATRRARWS- 302
Query: 106 QSEVSFLPQDLKL-IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F D L + A+V+S + N + R+LID G+++NIL A + ++
Sbjct: 303 EVALTFDQTDHPLCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPG 362
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQW 209
++P QP+IG + T+ G + +F V + PYNA+LGR
Sbjct: 363 MVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAVLGRPA 421
Query: 210 IHKMRVVPSTYHQVL 224
+ ++++ + Y+ L
Sbjct: 422 L--VKIMAAVYYAYL 434
>gi|55733826|gb|AAV59333.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 923
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+LID GSS+N+L +T++ M + + ++ P +QP G +
Sbjct: 729 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSEPL 788
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ S F V + + YNAI+GR + K +QVL
Sbjct: 789 GKITLPVTFGQASNFRTEQITFHVTEFDTAYNAIIGRTALAKYMAASHYAYQVLNMPGPK 848
Query: 231 GIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 849 GTITIQGNAKLAVQC 863
>gi|62732692|gb|AAX94811.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 881
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I++ H L I+ + + ++++D G++VN++ AT K + + L F
Sbjct: 703 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKFGRNAEDLIKTNMVLKDFG 762
Query: 179 GI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
G +T S ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 763 GNRSETKGVLNVELTVSSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 819
>gi|147801164|emb|CAN66547.1| hypothetical protein VITISV_036484 [Vitis vinifera]
Length = 881
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ + V +L+DN S++N+ AT + PF Q + +
Sbjct: 522 HVHPLYITVGFSSHRVPSVLLDNDSALNVCPLATAIALGFAPSDFGPFTQTVRAYDSTKR 581
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V + S +N +LGR WIH V+PS+ HQ
Sbjct: 582 EVMGTLMVDLQIGPTTFSTLFQVFRIPSSFNLLLGRPWIHIAGVIPSSLHQ 632
>gi|147768722|emb|CAN62676.1| hypothetical protein VITISV_002828 [Vitis vinifera]
Length = 1762
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H +L IS+ V +L+DNGS++N+ AT +
Sbjct: 152 IVFSDDDLPQEGSDHTRSLYISVGCSGRRVPFVLLDNGSALNVCPLATAIALGYAPSDFG 211
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L V++ + +N +LGR WIH+ +P
Sbjct: 212 PSTQTIRAYDSTRREVMGTLEIELLIGPTTFVAVFQVLRIPTSFNLLLGRPWIHRAEAIP 271
Query: 218 STYHQ 222
S+ HQ
Sbjct: 272 SSLHQ 276
>gi|18958679|gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|20270061|gb|AAM18149.1|AC092172_9 Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430891|gb|AAP52743.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 708 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 815
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILGR + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREE 926
>gi|147768439|emb|CAN73637.1| hypothetical protein VITISV_020488 [Vitis vinifera]
Length = 2301
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 765
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLXIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 218 STYHQ 222
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|108862798|gb|ABA98874.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 893
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 51/242 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFV-KVEDKQPQNQNNFLKKDQIENST 57
C H +H DC KK +E+ ++ KG+ V K E+ P ++ + S
Sbjct: 666 CPIHKTDKHSLEDCLVFKKSLEKHMAFEKGKRVRIVEKNEETAPHESDSAYSDSDLHVS- 724
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
H+ Y KRE + E + K+ + ++ F
Sbjct: 725 ------------------HIFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSKQKIEF 766
Query: 112 LPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
+D K P +VI I N V R+LID GSS+N+L +T++ M + Q ++ P
Sbjct: 767 SEEDHPKTAVIPGRYPIVIEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPT 826
Query: 171 EQPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIH 211
+QP F GI S L F V + + YNAI+GR +
Sbjct: 827 DQP---FHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALA 883
Query: 212 KM 213
K
Sbjct: 884 KF 885
>gi|77552608|gb|ABA95405.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 431
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL--------- 188
+ ++L+D G++VN++ AT +K+ + + L F G + + G L
Sbjct: 129 ISKMLVDGGAAVNLMPYATFKKLGKTAEDLITTNMVLKDFGGNPSETKGVLNVELTIGSK 188
Query: 189 --LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQAT 241
T F V+ YN +LGR WIH +PST HQ L +E + D++
Sbjct: 189 TVPTTFFVIDGKGSYNLLLGRDWIHANCCIPSTMHQSLIQWQGDKVEVVPADKSV 243
>gi|147845704|emb|CAN79906.1| hypothetical protein VITISV_034933 [Vitis vinifera]
Length = 1882
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 681 IVFSDDDLPPEGSDHTRPLYISVXCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 740
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 741 PSTQTVRAYDSTRREVMGTLEIELLIGSATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 800
Query: 218 STYHQ 222
S+ HQ
Sbjct: 801 SSLHQ 805
>gi|147836380|emb|CAN64344.1| hypothetical protein VITISV_042757 [Vitis vinifera]
Length = 383
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 196 KATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
K S +NAI+GR W+H M+V+PSTYHQ++ Y T G + G Q
Sbjct: 337 KDLSHFNAIMGRTWLHGMKVIPSTYHQIVSYLTEDGQVNLFGSQ 380
>gi|147771507|emb|CAN67000.1| hypothetical protein VITISV_019172 [Vitis vinifera]
Length = 250
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 202 NAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
NAI GR W+HKM+V+PS YHQ++ Y T G + G Q R C
Sbjct: 115 NAIKGRPWLHKMKVIPSMYHQMVSYLTEVGQTNLLGSQLAMRQC 158
>gi|108862531|gb|ABA97828.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1644
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 93 PEEFSKKCVK-LDVQSEVS--FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K V+ +DV+ + L + + + P H L I+ + L+ ++++
Sbjct: 725 PAEFEAKQVEVIDVEEASAKLVLSPEQAIFEKPEGTQNRHLKPLYINGFVNGKLMSKMIV 784
Query: 144 DNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTD 191
D G++VN++ AT K+ R D IK L F G + + G L T
Sbjct: 785 DGGAAVNLMPYATFRKLGRNPHDLIKT-NMVLKDFGGNPSETKGVLNVELTVGSKTVPTT 843
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F V+ Y+ +LGR WIH +PST H+ L
Sbjct: 844 FFVIDGKGSYSLLLGRDWIHATCCIPSTMHRCL 876
>gi|58531958|emb|CAE03068.2| OSJNBa0089E12.6 [Oryza sativa Japonica Group]
Length = 1939
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKECFIYKQFAEQYT-----KPTRKNSDEE---QSTSRKKDDGDTPAGFQ 712
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + P+ E +R +REI A + + + ++ SE++ ++
Sbjct: 713 DHRKELNHIFGGPMAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IR 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 761 FDRSNHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 820
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILGR + K
Sbjct: 821 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKF 880
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 881 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDLAQTREMASAREE 931
>gi|147781249|emb|CAN74038.1| hypothetical protein VITISV_028523 [Vitis vinifera]
Length = 2317
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V I++DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSIILDNGSALNVCHLATAIALGYAPSDFG 765
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIHK +P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHKAGAIP 825
Query: 218 STYHQ 222
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|13992671|gb|AAK51565.1|AC022352_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1175
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLK-----EFVKVEDKQP-------------- 41
C +HN H T DC+ ++ I+ I G++K +KV D P
Sbjct: 521 CKWHNSGSHSTNDCKVFRQQIQAAIEGGKIKFDDSKRPMKV-DGNPFPVNMVHTAGRSTD 579
Query: 42 -----------QNQNNFLKKDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREI 90
Q N+ LKK + + Q+ A + K ++V +
Sbjct: 580 GGRTRGFQEVEQESNHRLKKTKPKQEWRVKNQVPTADEATADETKRLAKGKSVVTASVNM 639
Query: 91 E--APEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIG 134
P EF K +D E S KLI SP H L ++ +
Sbjct: 640 AFTLPAEFGIKQADVDEVEEES-----AKLILSPEQAVFEKPEGTENRHLKPLYVNGFVN 694
Query: 135 NCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-------- 186
+ ++++D G++VN++ AT K + + L F G + + G
Sbjct: 695 GKPMSKMMVDGGAAVNLMPYATFRKQGRNAEVLIKTNMVLKDFGGTPSETKGVLNVELTV 754
Query: 187 ---SLLTDFLVVKATSPYNAILGRQWIHKMRVVPST 219
++ T F V+ Y+ +LGR WIH +PST
Sbjct: 755 GSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPST 790
>gi|116309017|emb|CAH66133.1| H0622G10.2 [Oryza sativa Indica Group]
Length = 1224
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 114 QDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
+ L+ ++ H L I+ + + +++ D G++VN++ AT K+ + I
Sbjct: 144 EKLEGTENQHLKPLYINGYVNGKPMSKMMFDGGAAVNLMPYATFRKLGRNAEDIIKTNMV 203
Query: 174 LIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L F G + + G ++ T F V+ Y+ +LGR WIH +PST HQ
Sbjct: 204 LKDFGGNSSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANGCIPSTMHQ 263
Query: 223 VL 224
L
Sbjct: 264 CL 265
>gi|28273421|gb|AAO38507.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 831
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L T++ M + + ++ P +QP F GI S
Sbjct: 637 IVVEPTIRNIKVTRVLIDGGSSINLLFAITLDAMGIPRSELTPTDQP---FHGITPQSSS 693
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + + YNAI+GR + K +QVL
Sbjct: 694 KPLGKITLPVTFGQANNFRTEQITFDVAEFNTTYNAIIGRTALAKFMAASHYAYQVLKMP 753
Query: 228 TIYGIEEIGGDQATTRTC 245
+ G I G+ C
Sbjct: 754 GLKGTITIQGNAKLAVQC 771
>gi|359472600|ref|XP_003631172.1| PREDICTED: uncharacterized protein LOC100852915 [Vitis vinifera]
Length = 2212
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 659 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 718
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 719 PSTQTVRAYDSTRREVMGTLEIELLIGSATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 778
Query: 218 STYHQ 222
S+ HQ
Sbjct: 779 SSLHQ 783
>gi|147862120|emb|CAN78755.1| hypothetical protein VITISV_040529 [Vitis vinifera]
Length = 261
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 5 NDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEPEQIV 64
ND ++ L++ +E LI G LK+++++ Q + + Q +++ P ++
Sbjct: 88 NDHTGSSKPSNQLRQAMERLIKVGHLKQYIRMAGGQKEMVGDL--AIQTPTTSTAPRVVI 145
Query: 65 NTIMAPLPLEVHMTKERN--VYCKKREIEAPEEFSKKCVKLDVQSE---VSFLPQDLKLI 119
N I E + +K + + C E D S ++F P + +
Sbjct: 146 NYIHGGSIDEKYNSKRKRQRLLCATSVRERINSIQHNLSNGDAPSMDDMITFPPINANRV 205
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
PH++AL+ ++ I VRR+L+D GSS N+L + +M L
Sbjct: 206 MQPHENALIPTLGISGFDVRRVLVDPGSSANLLQMSAYRQMGL 248
>gi|38605802|emb|CAE05270.2| OSJNBb0014D23.4 [Oryza sativa Japonica Group]
Length = 1684
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERREGKTPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 535 VDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M VV Y Q+
Sbjct: 705 LGRPALVKFMAVVHYAYLQM 724
>gi|77551359|gb|ABA94156.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 37/255 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + + + +T+E
Sbjct: 475 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P V T+ V R++ KRE+ A + + + S
Sbjct: 535 VDDGDDDLGFQEPGATVATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFL---PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
EV+ L + A+V+S+ + N + R+LID G+++NIL A + ++
Sbjct: 591 EVALTFDQTDHLPCVARGGQIAMVVSLTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPG 650
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQW 209
++P QP+IG + T+ G + +F V + PYNA+LGR
Sbjct: 651 MVLRP-SQPIIGVTPGHTWPLGHINLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPA 709
Query: 210 IHK-MRVVPSTYHQV 223
+ K M V TY Q+
Sbjct: 710 LVKFMAAVHYTYLQM 724
>gi|78708107|gb|ABB47082.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 828
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 140 RILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL---------- 189
+IL+D G++VN++ AT K+ + + L F G T ++G L
Sbjct: 653 KILVDGGAAVNLMPYATFRKLGKNAEYLMKTNMVLKDFGGNPTEANGVLKIKITVGSKTV 712
Query: 190 -TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V+ Y + GR WIH +PST HQ L
Sbjct: 713 PTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 748
>gi|359477856|ref|XP_003632035.1| PREDICTED: uncharacterized protein LOC100854167 [Vitis vinifera]
Length = 2300
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 677 DRATCIVFSADDLPSEGSDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATAIALGFA 736
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHK 212
P Q + + G+L D L V++ + +N +LGR WIH+
Sbjct: 737 PSDFGPSTQTVRAYDSTQRGVMGTLTIDLLIGPTTFSILFQVLRIPASFNLLLGRPWIHQ 796
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 797 AGAIPSSLHQ 806
>gi|38567649|emb|CAE75887.1| B1234D02.11 [Oryza sativa Japonica Group]
gi|38605876|emb|CAD40002.3| OSJNBb0052B05.5 [Oryza sativa Japonica Group]
Length = 1823
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L + + + P H L I+ + + ++++
Sbjct: 744 PAEFGAKQADVDEVEEASARLVLSPEQAIFEKPEGIENQHLKPLYINGYVNRKPMSKMMV 803
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTDF 192
D G++VN++ AT K+ + + L F G + + G L T F
Sbjct: 804 DGGAAVNLMPYATFRKLGKNAEDLIKKNMVLKDFGGNPSETKGVLNVELTVGSKTVPTTF 863
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ Y+ +LGR WIH +PST HQ L
Sbjct: 864 FIIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 895
>gi|356570299|ref|XP_003553327.1| PREDICTED: uncharacterized protein LOC100814838 [Glycine max]
Length = 2284
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 844 LSFSDEELPEEGRNHNLALHISVNYKSDALSNVLVDTGSSLNVMAKSTLDQLFYQGPPMR 903
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 904 RSGVVVKAFDGSRKAVIGEVDLPITIGPSVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 963
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 964 STLHQKLKFVRNGRLITVSGEEA 986
>gi|147852267|emb|CAN80129.1| hypothetical protein VITISV_018340 [Vitis vinifera]
Length = 2285
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSAHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRXGAIP 826
Query: 218 STYHQ 222
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|77556325|gb|ABA99121.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1681
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 106/271 (39%), Gaps = 45/271 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC KK +E+ ++ + K V+V +K + N E+ ++ P
Sbjct: 585 CPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKR-VRVVEKNEETAPN-------ESDSAYP 636
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLPQ 114
+ ++ H+ Y KRE + E + K+ + ++ F +
Sbjct: 637 DSDLHV--------SHIFGSSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEFSEE 688
Query: 115 D-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP 173
D K P +++ I N V R+LID GSS+N+L +T++ + Q ++ P +QP
Sbjct: 689 DHPKTAVIPGRYPIMVEPTIRNIKVARVLIDGGSSINLLFASTLDATGIPQSELTPTDQP 748
Query: 174 LIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMR 214
F GI S L F VV+ + NAI+GR + K
Sbjct: 749 ---FHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVVEFDTACNAIIGRTALVKFM 805
Query: 215 VVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 806 AAFHYVYQVLKMPGPKGTITIRGNAKLAVQC 836
>gi|20043066|gb|AAM08874.1|AC113339_20 Hypothetical protein with similarity to putative retroelements
[Oryza sativa Japonica Group]
Length = 821
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 140 RILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLL---------- 189
+IL+D G++VN++ AT K+ + + L F G T ++G L
Sbjct: 646 KILVDGGAAVNLMPYATFRKLGKNAEYLMKTNMVLKDFGGNPTEANGVLKIKITVGSKTV 705
Query: 190 -TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V+ Y + GR WIH +PST HQ L
Sbjct: 706 PTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 741
>gi|147836100|emb|CAN62090.1| hypothetical protein VITISV_013805 [Vitis vinifera]
Length = 2463
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 620 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 679
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 680 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 739
Query: 218 STYHQ 222
S+ HQ
Sbjct: 740 SSLHQ 744
>gi|110288734|gb|AAP52501.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1964
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 708 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 815
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILG + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREE 926
>gi|38347565|emb|CAE04998.2| OSJNBb0093G06.6 [Oryza sativa Japonica Group]
Length = 1165
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 85 CKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILID 144
K+ +++ EE S K V L ++ V P+ I++ H L ++ + + +++++
Sbjct: 242 AKQADVDEVEEASAKLV-LSLEQAVFEKPEG---IENRHVKPLYVNGYVNGKPMSKMMVN 297
Query: 145 NGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDFL 193
G++VN++ AT K+ + + L F G + + G ++ T F
Sbjct: 298 GGAAVNLMPYATFRKLGRNAEDLIKTNMVLKNFGGNPSETKGVLNVELTAGSKTIPTTFF 357
Query: 194 VVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ YN +LG WIH +PST HQ L
Sbjct: 358 VIDGKGSYNLLLGSDWIHANCCIPSTMHQCL 388
>gi|359474418|ref|XP_003631459.1| PREDICTED: uncharacterized protein LOC100853395 [Vitis vinifera]
Length = 2434
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 807 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 866
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 867 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 926
Query: 218 STYHQ 222
S+ HQ
Sbjct: 927 SSLHQ 931
>gi|110289030|gb|ABB47502.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 870
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 107/276 (38%), Gaps = 47/276 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H RH DC KK +E+ ++ + K V+V +E
Sbjct: 595 CPIHKMDRHSLEDCLVFKKSLEKHMAFEKGKR-VRV----------------VEKDAEAA 637
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLP 113
Q +++ L V H+ Y KRE + E + K+ + ++ F
Sbjct: 638 AQELDSAYPDSDLHVSHIFGGSTAYSSKREYKKVEREVCSTWQGAAPKMKWCEQKIEFSE 697
Query: 114 QD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+D K P +V+ I N V R+LID GSS+N+L + ++ MR+ + ++ P +Q
Sbjct: 698 EDHPKTAVIPGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASALDAMRIPRSELTPTDQ 757
Query: 173 PLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGI 232
P F GI + NAI+GR + K V +QVL G
Sbjct: 758 P---FHGITPH-----------------VNAIIGRTALAKFMAVSHYAYQVLKMPGPKGT 797
Query: 233 EEIGGDQATTRTC--ASNGMGKQNRELGSTRNQPWK 266
I G+ C S M +Q L +T P K
Sbjct: 798 ITIQGNAKLLVQCDKRSLDMVEQTPSLPATTEPPKK 833
>gi|108710522|gb|ABF98317.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1375
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L T++ M + + ++ P +QP F GI S
Sbjct: 637 IVVEPTIRNIKVTRVLIDGGSSINLLFAITLDAMGIPRSELTPTDQP---FHGITPQSSS 693
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + + YNAI+GR + K +QVL
Sbjct: 694 KPLGKITLPVTFGQANNFRTEQITFDVAEFNTTYNAIIGRTALAKFMAASHYAYQVLKMP 753
Query: 228 TIYGIEEIGGDQATTRTC 245
+ G I G+ C
Sbjct: 754 GLKGTITIQGNAKLAVQC 771
>gi|22953960|gb|AAN11193.1| Putative gag-pol precursor [Oryza sativa Japonica Group]
gi|31430035|gb|AAP52006.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K+ E+ + K K D +Q KKD +++ +
Sbjct: 605 CPHHPNSNHVAKDCFVYKQLAEQYV-----KNARKPSDG---DQGTSKKKDDEDDAPTGF 656
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + + PL E +R +REI A + + + ++ SE++ +
Sbjct: 657 QDHRKELNHILGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 704
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 705 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFVKTLDDMQIPRTELK 764
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILG + K
Sbjct: 765 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGGPALAK 824
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 825 FMAVPHYTYMMIKMPGPRGVISLRSDIKQAVTC 857
>gi|21671903|gb|AAM74265.1|AC083943_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431952|gb|AAP53658.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1170
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 446 HLKPLYINGYVNGKTMSKMMVDGGAAVNLMPYATFRKLGRNTEALIKTNMVLKDFGGNPS 505
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 506 ETRGVLNVELTVGSKTIPTTFFVINGNGSYSLLLGRDWIHANCCIPSTMHQCL 558
>gi|52353720|gb|AAU44286.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1316
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF + +D E+S L + + + P H L I+ + + ++++
Sbjct: 625 PAEFEARQADVDDVEEISARLVLSPEQAIFEKPEGTGNRHLKPLYINGFVNGKPMSKMMV 684
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLTDF 192
D G++VN++ AT K+ D + L F G + + G ++ T F
Sbjct: 685 DRGAAVNLMPYATFRKLSRNPDDLIKNNMVLKDFGGNPSETKGVFNVEQTVDSKTVPTTF 744
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ Y+ +LGR WI+ +PST HQ L
Sbjct: 745 FVIDGKGSYSLLLGRDWINANYCIPSTMHQCL 776
>gi|22128685|gb|AAM92798.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1986
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H ++C K++ E+ K K D++ Q+ KKD +
Sbjct: 656 CPHHPNSNHVAKECFIYKQFAEQYT-----KSTRKNSDEE---QSTSRKKDDGDTPAGFQ 707
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 708 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 755
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 756 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKS 815
Query: 169 ---PFEQPLIGFSGI--------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKM 213
PF + G S VT+ F V + Y+AILG + K
Sbjct: 816 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGHPALAKF 875
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMG-KQNRELGSTRNQ 263
VP + ++ G+ + D TC Q RE+ S R +
Sbjct: 876 MAVPHYTYMMMKMPGPRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREE 926
>gi|147818319|emb|CAN73538.1| hypothetical protein VITISV_012619 [Vitis vinifera]
Length = 225
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F P D + PH+DALV+++ +G V +ILID G+S ++L + +M
Sbjct: 10 IDGPITFPPIDSNRVILPHEDALVLTLGVGGFDVHKILIDLGNSTDLLQMSAYRQMGYSL 69
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGR 207
++ L F+G S G ++ F +V+ SPYN I+G+
Sbjct: 70 SALENIVLILTSFNGASIVSLGDVILPVQVGPITLNVRFSIVEDLSPYNTIMGQ 123
>gi|147867376|emb|CAN83278.1| hypothetical protein VITISV_009181 [Vitis vinifera]
Length = 2129
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 644 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 703
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 704 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 763
Query: 218 STYHQ 222
S+ HQ
Sbjct: 764 SSLHQ 768
>gi|356522885|ref|XP_003530073.1| PREDICTED: uncharacterized protein LOC100789592 [Glycine max]
Length = 2315
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 875 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 934
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + VT F V+ + Y+ +LGR WIH+ V
Sbjct: 935 RSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 994
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 995 STLHQKLKFVRNGKLITVSGEEA 1017
>gi|13435244|gb|AAK26119.1|AC084406_2 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1901
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + + +E
Sbjct: 433 CTVHNTSLHDLADCRAVKSLAERTRKWEKEKRQERREGKAPAAPAGNRRGEAKQKAPAED 492
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 493 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 548
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 549 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 603
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 604 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 662
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 663 LGRPALVKFMAAVHYAYLQM 682
>gi|108710404|gb|ABF98199.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1887
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + + +E
Sbjct: 433 CTVHNTSLHDLADCRAVKSLAERTRKWEKEKRQERREGKAPAAPAGNRRGEAKQKAPAED 492
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 493 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 548
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 549 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 603
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 604 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 662
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 663 LGRPALVKFMAAVHYAYLQM 682
>gi|359497336|ref|XP_003635486.1| PREDICTED: uncharacterized protein LOC100853954, partial [Vitis
vinifera]
Length = 1549
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 86 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 145
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 146 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 205
Query: 218 STYHQ 222
S+ HQ
Sbjct: 206 SSLHQ 210
>gi|356570351|ref|XP_003553353.1| PREDICTED: uncharacterized protein LOC100790215 [Glycine max]
Length = 2317
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 877 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 936
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 937 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 996
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 997 STLHQKLKFVRNGSLITVSGEEA 1019
>gi|147791735|emb|CAN68353.1| hypothetical protein VITISV_022217 [Vitis vinifera]
Length = 2168
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 557 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAFALGYAPSDFG 616
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 617 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVVVFQVLRIPTSFNLLLGRPWIHRAGAIP 676
Query: 218 STYHQ 222
S+ HQ
Sbjct: 677 SSLHQ 681
>gi|284434716|gb|ADB85414.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1429
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 22/127 (17%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD------ 191
V R+L+D GSS+NIL +E+M++ K+KP + P F GIV S +
Sbjct: 660 VNRVLVDGGSSLNILFAGALEEMQVPMSKVKPVKYP---FHGIVPGSTAKPIGQVSLPVT 716
Query: 192 -------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
F VV S Y+ ILG+ + K + +Q L G+ I GD
Sbjct: 717 FGRPDNFRTEKIPFDVVNLESAYSGILGQSALAKFLIATHYGYQSLKMPGPKGVITIRGD 776
Query: 239 QATTRTC 245
Q C
Sbjct: 777 QKMAYVC 783
>gi|62732770|gb|AAX94889.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 589
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E S KLI SP H L I+ + +
Sbjct: 274 PAEFGNKQADIDEVEEES-----AKLILSPEQAVFEKLEGTENRHLKPLYINCYVNGKPM 328
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG-----------IVTYSDGS 187
++++D G++VN++ T K+ + + L F G +T + +
Sbjct: 329 SKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVGLTVGNKT 388
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ ++GR WIH +PST HQ L
Sbjct: 389 IPTTFFVLDGKGSYSLLVGRDWIHANCCIPSTMHQCL 425
>gi|356551968|ref|XP_003544344.1| PREDICTED: uncharacterized protein LOC100804218 [Glycine max]
Length = 2290
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 850 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 909
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + VT F V+ + Y+ +LGR WIH+ V
Sbjct: 910 RSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 969
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 970 STLHQKLKFVRNGKLITVSGEEA 992
>gi|77549344|gb|ABA92141.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1929
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 48/252 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q KKD +++ +
Sbjct: 631 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNACKPSDG---DQGTSKKKDDEDDAMTGF 682
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 683 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 730
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ ++K
Sbjct: 731 KFNRSDHPDRVVHSGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPCTELK 790
Query: 169 PFEQPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F + + Y AILGR + K
Sbjct: 791 PSNAPFHGVIPGLSATPLGQITVPVTLGTRENFRTENVCFEIADFETAYYAILGRPALAK 850
Query: 213 MRVVPSTYHQVL 224
VP + ++
Sbjct: 851 FMAVPHYTYMMM 862
>gi|359483561|ref|XP_003632976.1| PREDICTED: uncharacterized protein LOC100852629 [Vitis vinifera]
Length = 2289
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 697 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 756
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 757 PTTQTVRAYDSTRREVMGTLEIELLIDPATFVVVFQVLRIPTSFNLLLGRPWIHRAGAIP 816
Query: 218 STYHQ 222
S+ HQ
Sbjct: 817 SSLHQ 821
>gi|24796778|gb|AAN64455.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709262|gb|ABF97057.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 798
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 40/248 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D D + +
Sbjct: 476 CPHHPNSNHTAKDCFVYKQFTEQYT-----KNSRKASDGDQSTSKKKDDDDDVPTGFQDH 530
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEA--PE-----EFSKKCVKLDVQSEVSFL 112
+ +N I PL E +R KREI A P+ +SK +K D+
Sbjct: 531 RKELNHIFGGPLAYE----SKRKQKLTKREINAVQPDTPQFLRWSKTTIKFDLSDHPD-- 584
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+ P LV+ + N +RR LID GS++NIL ++ M++ + +++P
Sbjct: 585 -----RVVHPGRYPLVLDPVVRNVRLRRSLIDGGSALNILFAKILDDMQIPRAELRPSNA 639
Query: 173 PLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 640 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRLALAKFMAV 699
Query: 217 PSTYHQVL 224
P + ++
Sbjct: 700 PHYTYMMM 707
>gi|62734763|gb|AAX96872.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549715|gb|ABA92512.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1945
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 17/152 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FSGIVTYSD 185
LV+ + N +RR LID GS++NIL T++ M++ + ++KP P G G+
Sbjct: 728 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNVPFHGVIPGLSATPL 787
Query: 186 GSLL---------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
G + F V + Y+AILGR + K VP + ++
Sbjct: 788 GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPVLAKFMAVPHYTYMMMKMPGPR 847
Query: 231 GIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
G+ + D TC Q RE+ S R
Sbjct: 848 GVLSLRSDIKQAVTCDKESCDMAQTREMASAR 879
>gi|356519007|ref|XP_003528166.1| PREDICTED: uncharacterized protein LOC100792217 [Glycine max]
Length = 2265
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 825 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 884
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + VT F V+ + Y+ +LGR WIH+ V
Sbjct: 885 RSGVVVKAFDGSRKSVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 944
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 945 STLHQKLKFVRNGKLITVSGEEA 967
>gi|116317846|emb|CAH65879.1| OSIGBa0160I04.5 [Oryza sativa Indica Group]
Length = 1221
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 17/191 (8%)
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
+ +MAP+ + + E + + +++ EE S K V L + V P+ ++ H
Sbjct: 399 SVVMAPVNMVFTLPAEFGI--DQADVDEVEEESAKLV-LSPEQAVFEKPEG---TENRHL 452
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK-------IKPFEQPLIGF 177
L I+ + L+ ++++D G++VN++ AT K+ + IK F L
Sbjct: 453 KPLYINGYVNGKLMSKMMVDVGAAVNLMPFATFRKLGRNAEGLIKTNMVIKDFGGNLSET 512
Query: 178 SGIV----TYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
GI+ T ++ T F V Y+ +L R WIH +PST HQ L IE
Sbjct: 513 KGILNVELTVGSKTISTTFFVTDGKGSYSLLLRRDWIHANCCIPSTMHQCLIQWQGDKIE 572
Query: 234 EIGGDQATTRT 244
+ D+ T+
Sbjct: 573 IVPADRWRTQA 583
>gi|108864277|gb|ABA92934.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 586
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E S KLI SP H L I+ + +
Sbjct: 271 PAEFGNKQADIDEVEEES-----AKLILSPEQAVFEKLEGTENRHLKPLYINCYVNGKPM 325
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG-----------IVTYSDGS 187
++++D G++VN++ T K+ + + L F G +T + +
Sbjct: 326 SKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVGLTVGNKT 385
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ ++GR WIH +PST HQ L
Sbjct: 386 IPTTFFVLDGKGSYSLLVGRDWIHANCCIPSTMHQCL 422
>gi|356573867|ref|XP_003555077.1| PREDICTED: uncharacterized protein LOC100811111 [Glycine max]
Length = 2265
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 825 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 884
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 885 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 944
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 945 STLHQKLKFVRNGSLITVSGEEA 967
>gi|356519836|ref|XP_003528575.1| PREDICTED: uncharacterized protein LOC100807419 [Glycine max]
Length = 2270
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 830 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLS------- 882
Query: 169 PFEQPLIGFSGIVTYS-DGS------------------LLTDFLVVKATSPYNAILGRQW 209
++ P + SG+V + DGS F V+ + Y+ +LGR W
Sbjct: 883 -YQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPW 941
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
IH+ V ST HQ L + + + G++A
Sbjct: 942 IHEAGAVTSTLHQKLKFVRNGSLITVSGEEA 972
>gi|147798949|emb|CAN61732.1| hypothetical protein VITISV_008285 [Vitis vinifera]
Length = 2237
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 650 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 709
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 710 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 769
Query: 218 STYHQ 222
S+ HQ
Sbjct: 770 SSLHQ 774
>gi|147819107|emb|CAN75602.1| hypothetical protein VITISV_018938 [Vitis vinifera]
Length = 1588
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 668 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 727
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 728 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 787
Query: 218 STYHQ 222
S+ HQ
Sbjct: 788 SSLHQ 792
>gi|147860177|emb|CAN82919.1| hypothetical protein VITISV_008801 [Vitis vinifera]
Length = 2318
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 826
Query: 218 STYHQ 222
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|147865890|emb|CAN78842.1| hypothetical protein VITISV_015163 [Vitis vinifera]
Length = 2177
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 765
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAIFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 218 STYHQ 222
S+ HQ
Sbjct: 826 SSLHQ 830
>gi|147791400|emb|CAN76855.1| hypothetical protein VITISV_007394 [Vitis vinifera]
Length = 2130
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V L+DNGS++N+ AT +R
Sbjct: 644 IVFSDDDLPPEGSDHTRHLYISVGFSGRRVPSALLDNGSALNVCPLATAIALRYAPSDFS 703
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 704 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 763
Query: 218 STYHQ 222
+ HQ
Sbjct: 764 FSLHQ 768
>gi|62701758|gb|AAX92831.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1497
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 28/246 (11%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQL-----KEFVKVEDKQPQNQNNFLKKDQIEN 55
C +HN H T DC+ ++ I+ I G++ K+ +KV D P N Q +
Sbjct: 382 CKWHNSGSHSTNDCKVFRQQIQVAIEGGKIRFDDSKKPMKV-DGNPFPVNMVHTAGQAAD 440
Query: 56 STSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD 115
VN+ ++ + ++ ++R E ++ L+ S L +
Sbjct: 441 RFRAKGFQVNSAKI-----INKCQRKHDKQQERHYEEYDDGFDPHWDLEEGSAKLVLSPE 495
Query: 116 LKLIQSP------HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+ + P H I+ + + ++++D G++VN++ A K+ + +
Sbjct: 496 QAVFEKPEGTENRHLKPFYINGYVNGKPMSKMIVDGGAAVNLMPYAMFRKLGRNVEDLIK 555
Query: 170 FEQPLIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPS 218
L F G + + G ++ T F V+ Y+ +LGR WIH +PS
Sbjct: 556 TNMVLKDFGGNPSETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPS 615
Query: 219 TYHQVL 224
T HQ L
Sbjct: 616 TMHQCL 621
>gi|62701723|gb|AAX92796.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550552|gb|ABA93349.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1163
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L ++ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 862 HLKPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMALKDFGGNPS 921
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 922 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCLIQWQGDK 981
Query: 232 IEEIGGDQATTRTCASNGM 250
IE + D + A G+
Sbjct: 982 IEIVPVDMSVNVASADLGL 1000
>gi|359485628|ref|XP_003633300.1| PREDICTED: uncharacterized protein LOC100854777 [Vitis vinifera]
Length = 2323
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 723 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 782
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 783 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 842
Query: 218 STYHQ 222
S+ HQ
Sbjct: 843 SSLHQ 847
>gi|147815071|emb|CAN74570.1| hypothetical protein VITISV_034081 [Vitis vinifera]
Length = 1998
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 566 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 625
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 626 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 685
Query: 218 STYHQ 222
S+ HQ
Sbjct: 686 SSLHQ 690
>gi|147783484|emb|CAN72956.1| hypothetical protein VITISV_002875 [Vitis vinifera]
Length = 1391
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +J+DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVJLDNGSALNVCPLATAIALGYAPSDFG 68
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 69 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 128
Query: 218 STYHQ 222
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|147823161|emb|CAN75280.1| hypothetical protein VITISV_012467 [Vitis vinifera]
Length = 799
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
+L F +V SPYNAI+G W+H+M+V+PSTYHQ+
Sbjct: 325 TLNVQFSMVDDLSPYNAIMGHAWLHRMKVIPSTYHQM 361
>gi|147805667|emb|CAN67275.1| hypothetical protein VITISV_042514 [Vitis vinifera]
Length = 501
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ ++F P D + PH+D LV+++ +G V ILID GS VN+L + +M
Sbjct: 72 IDEPIAFSPIDSNRVILPHEDVLVLTLGVGGFDVHIILIDLGSFVNLLQMSAYRQMGYSL 131
Query: 165 DKIKPFEQPLIGFSG--IVTYSDGSLLTD---------FLVVKATSPYNAILGRQWIHKM 213
++ + L F+G IV+ D L F +V+ SPYN I HK+
Sbjct: 132 SALENPGRILTSFNGASIVSLGDDILTVQVDPITLNVLFSIVEDLSPYNEIDPFVVTHKL 191
Query: 214 RVVP 217
++P
Sbjct: 192 NILP 195
>gi|57834068|emb|CAD40314.2| OSJNBb0013O03.9 [Oryza sativa Japonica Group]
Length = 507
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+L+D GSS+N+L +T++ M + ++ P +QP G +
Sbjct: 313 IVVEPTIRNIKVARVLVDGGSSINLLFASTLDAMGIPLGELTPTDQPFHGITPQSSSKPL 372
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ S F VV+ + YNAI+GR + K +QVL
Sbjct: 373 GKIMLPVTFGQASNFRTEQITFHVVEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 432
Query: 231 GIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 433 GTITIQGNAKLAVQC 447
>gi|356560472|ref|XP_003548516.1| PREDICTED: uncharacterized protein LOC100811554 [Glycine max]
Length = 1998
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MRLEQDKIKPFE---Q 172
H+ AL IS+ + + +L+D GSS+N++ +T+++ MR +K F+ +
Sbjct: 910 HNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMRRSGVVVKAFDGSRK 969
Query: 173 PLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+IG + VT F V+ + Y+ +LGR WIH+ V ST HQ L +
Sbjct: 970 SVIGEVDLPVTIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVTSTLHQKLKFVRNGK 1029
Query: 232 IEEIGGDQA 240
+ + G++A
Sbjct: 1030 LITVSGEEA 1038
>gi|147865111|emb|CAN79817.1| hypothetical protein VITISV_006609 [Vitis vinifera]
Length = 2155
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNIL---DDATVEKMRLEQD 165
+ F DL S H L IS+ V +L+DNGS++N + D E M +
Sbjct: 410 IVFSDDDLPSEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNTIRAYDSTRREVMGTLEI 469
Query: 166 KIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
++ LIG + VT F V++ + +N +LGR WIH++ V+PS+ HQ
Sbjct: 470 EL------LIGPATFVTV--------FQVLRIPTSFNLLLGRPWIHRVGVIPSSLHQ 512
>gi|18568255|gb|AAL75989.1|AF466204_4 putative GAG-POL precursor -orf1 protein [Sorghum bicolor]
Length = 841
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 108 EVSFLPQD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
E+SF +D I P L++ I + R+L+D GSS++IL ++ +++ +
Sbjct: 615 EISFSRKDQWAAIPEPGRFPLILDPCINSIRFERVLMDGGSSIDILFRNSLPALKISPTQ 674
Query: 167 IKPFEQPLIG-FSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQWI 210
+KP++ G G + G + +F+V Y+AILGR +
Sbjct: 675 LKPYDAQFWGVLPGQSSVPLGQITLPVQFGTPDHFWTEFVNFVVADFDGTYHAILGRPSL 734
Query: 211 HKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
K VP + VL T G+ + G+ T TC
Sbjct: 735 TKFMAVPHYSYLVLKMPTEKGVLTVRGNVYTAYTC 769
>gi|147810674|emb|CAN76372.1| hypothetical protein VITISV_011468 [Vitis vinifera]
Length = 1342
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V ++++NGS++N+ AT +
Sbjct: 124 IVFSDDDLPPEGSDHTRPLYISVSCSGRRVPYVILENGSALNVCSLATAIALGDAPFDFD 183
Query: 169 PFEQPLIG-------FSGIVTYS----DGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
PF Q + GI+ + +T F ++ + +N +LGR WIH+ R +P
Sbjct: 184 PFTQTVRASDSTRRKVMGIIEMELLIGSTTFVTVFQALRILTSFNLLLGRPWIHRARAIP 243
Query: 218 STYHQ 222
S+ HQ
Sbjct: 244 SSLHQ 248
>gi|147793981|emb|CAN77844.1| hypothetical protein VITISV_028932 [Vitis vinifera]
Length = 1928
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 624 IVFSDDDLPPEGSDHTRPLYISVGFSGGRVPSVLLDNGSALNVCPLATAIALGYAPSDFS 683
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
P Q + + T V++ + +N +LGR WIH+ +PS+ HQ
Sbjct: 684 PSTQTVRAYDS----------TRREVLRIPTSFNLLLGRSWIHRAGAIPSSLHQ 727
>gi|38346469|emb|CAE03708.2| OSJNBa0021F22.2 [Oryza sativa Japonica Group]
gi|38346740|emb|CAE04305.2| OSJNBa0083I11.15 [Oryza sativa Japonica Group]
Length = 1563
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 54/277 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQL-----KEFVKVEDKQPQNQNNFLKKDQIEN 55
C +HN H T DC+ ++ I+ I G++ K+ +KV D P N Q +
Sbjct: 728 CKWHNSGSHSTNDCKVFRQQIQVAIEGGKIKFDDSKKPMKV-DGNPFPVNMVHTASQAAD 786
Query: 56 STS------EPEQIVNTIMAPL-------------PLEVHMTKERNVYCKKREIEAP--- 93
+ +I+N + H E +C + P
Sbjct: 787 GSRAKGFQVHSAKIINKYQRRYDKQQGRRYEENDNGFDPHWDCEFFRFCWNERMRLPSIK 846
Query: 94 ---------EEFSKKCVKLDVQSEVSFLPQDLKLIQSP------HDDALVISIKIGNCLV 138
E S+ ++ +S L + + + P H L ++ I +
Sbjct: 847 NCPGCSDIIESSSRPHSRVGEESAKLALSSEQAVFEKPEGTENRHLKPLYVNGYINGKPM 906
Query: 139 RRILIDNGSSVNILDDATVEKM-RLEQDKIKP------FEQPLIGFSGIV----TYSDGS 187
++++D G++VN++ AT K+ R +D IK F G++ T + +
Sbjct: 907 SKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGSNPSETKGVLNVELTVGNKT 966
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 967 IPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1003
>gi|359475724|ref|XP_003631741.1| PREDICTED: uncharacterized protein LOC100260551 [Vitis vinifera]
Length = 1856
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 101 VKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
+ +D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 261 MTVDRATCIVFSADDLPPEGSDHTRPLYITVVCSGHRVLSVLLDNGSALNVCPLATAIVL 320
Query: 161 RLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQW 209
P Q + + G+L D L V++ +N +LGR W
Sbjct: 321 GFAPSDFGPSTQTVRAYDSTQREVMGTLTIDLLIGPTTFSILFQVLRIPVSFNLLLGRPW 380
Query: 210 IHKMRVVPSTYHQ 222
IH+ +PS+ HQ
Sbjct: 381 IHQAGAIPSSLHQ 393
>gi|147814822|emb|CAN65803.1| hypothetical protein VITISV_014920 [Vitis vinifera]
Length = 1187
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 115 DLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL 174
DL S H L IS+ + V +L+DNGS++N+ A + P Q +
Sbjct: 682 DLPPEGSDHTCPLHISVGCSSRRVPSVLLDNGSALNVCPLAIAITIGYVPFDFGPSTQTV 741
Query: 175 IGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+ + G+L +T F V++ + +N +LGR WIHK +V+PS +HQ
Sbjct: 742 RAYDSTRSEVMGTLEVELLIGSTSFITVFQVLRIPTSFNLLLGRPWIHKAKVIPSFFHQ 800
>gi|224112685|ref|XP_002332728.1| predicted protein [Populus trichocarpa]
gi|222833012|gb|EEE71489.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
++F P D + I+ PH+DALVIS + V + L+D+ S +NIL + K+ ++ ++
Sbjct: 29 ITFTPADGQGIKYPHEDALVISTVMEGHRVHKTLVDDDSLMNILSAEAMTKIGMDAFRMT 88
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSP 200
PLIG G G+ +V T+P
Sbjct: 89 IVPTPLIGIEGSAVLMKGA--EGLIVTMGTAP 118
>gi|116308854|emb|CAH65991.1| H1005F08.20 [Oryza sativa Indica Group]
Length = 1571
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C+ H RH DC KK++ + ++ + K V+V +E P
Sbjct: 536 CSIHKTDRHSLEDCLVFKKWLAKHMASEKGKR-VRV----------------VEKDAEAP 578
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
Q +++ L V H+ Y KRE + E
Sbjct: 579 TQELDSAYPDSDLHVSHIFGGSTAYSSKREYKKVER------------------------ 614
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+ P +V+ I N V R+LID GSS+N+L + ++ M + + ++ P +QP F G
Sbjct: 615 RYP----IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQP---FHG 667
Query: 180 IVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
I S L F V + + YNAI+GR + K
Sbjct: 668 ITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALVKFMAASHYA 727
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 728 YQVLKMPGPKGTITIQGNAKLAVQC 752
>gi|356524006|ref|XP_003530624.1| PREDICTED: uncharacterized protein LOC100785887 [Glycine max]
Length = 2320
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 880 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 939
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 940 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 999
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 1000 STLHQKLKFVRNGKLITVSGEEA 1022
>gi|54291771|gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+L+D GSS+N+L +T++ M + + ++ P +QP G +
Sbjct: 259 IVVEPTIRNIKVARVLVDRGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 318
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ S F V + + YNAI+GR + K +QVL
Sbjct: 319 GKITLPVTFGRASNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPK 378
Query: 231 GIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 379 GTITIQGNAKLAVQC 393
>gi|147854545|emb|CAN82781.1| hypothetical protein VITISV_003928 [Vitis vinifera]
Length = 292
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+L F VV+ SP+NAI+GR W+H+M+VV STYHQ++
Sbjct: 37 TLSLQFSVVEDLSPFNAIMGRAWLHRMKVVYSTYHQMI 74
>gi|356498995|ref|XP_003518330.1| PREDICTED: uncharacterized protein LOC100818337 [Glycine max]
Length = 2323
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 883 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 942
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 943 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 1002
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 1003 STLHQKLKFVRNGKLITVSGEEA 1025
>gi|77555936|gb|ABA98732.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1575
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I++ H L I+ + + ++++D G++VN++ AT ++ + + L F
Sbjct: 957 IENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRELGRNAEDLIKTNMVLKDFG 1016
Query: 179 GIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G + + G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 1017 GNPSETKGVLNVELTVDSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQW 1076
Query: 228 TIYGIEEIGGD 238
IE + D
Sbjct: 1077 QGDNIEIVPAD 1087
>gi|41469127|gb|AAS07078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1724
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP F GI S
Sbjct: 754 IVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQP---FHGITPQSSS 810
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
L F V + + YNAI+GR K +QVL
Sbjct: 811 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHAKFMAASHYAYQVL 867
>gi|108708300|gb|ABF96095.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 719
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + + ++ P +QP F GI S
Sbjct: 261 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQP---FHGITPQSSS 317
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
+ F V + + YNAI+GR + K +QVL
Sbjct: 318 KPMGKITLHVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMP 377
Query: 228 TIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 378 GPKGTITIQGNAKLAVQC 395
>gi|108864597|gb|ABA94871.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1965
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAATP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPH--------DDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N +RR+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPLCVARGGQIAMVVSPTICNVKLRRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + L F V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTELVSFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|147775045|emb|CAN59913.1| hypothetical protein VITISV_030726 [Vitis vinifera]
Length = 1957
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 107 SEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDK 166
+ + F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 573 TXIVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSD 632
Query: 167 IKPFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRV 215
P Q + + G+L +T F V++ + +N LGR WIH+
Sbjct: 633 FGPSTQTVRAYDSTRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLRLGRPWIHRAGA 692
Query: 216 VPSTYHQ 222
+PS+ HQ
Sbjct: 693 IPSSLHQ 699
>gi|108708807|gb|ABF96602.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP F GI S
Sbjct: 757 IVVEATIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPTDQP---FHGITPQSSS 813
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
L F V + + YNAI+GR K +QVL
Sbjct: 814 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTAHAKFMAASHYAYQVL 870
>gi|110288898|gb|ABB47187.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 989
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 117 HLKPLYINGYVNGKPLSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 176
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 177 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 229
>gi|147791751|emb|CAN66056.1| hypothetical protein VITISV_020755 [Vitis vinifera]
Length = 1529
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 651 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 710
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 711 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 770
Query: 218 STYHQ 222
S+ HZ
Sbjct: 771 SSLHZ 775
>gi|50897345|gb|AAT85796.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709086|gb|ABF96881.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 712
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 113 PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
P +++ P LV+ + + N +RR LID+GS++NIL T++ M++ + ++KP
Sbjct: 525 PWHDRIMVHPGRYPLVLDLVVHNVKLRRTLIDDGSALNILFAKTLDDMQIPRTELKPSNA 584
Query: 173 PLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVV 216
P G G+ G + F V + Y+AILGR + K V
Sbjct: 585 PFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAV 644
Query: 217 PSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
P + ++ G+ + D TC
Sbjct: 645 PHYTYMMMKMPGPRGVISLRSDIKQAVTC 673
>gi|356561241|ref|XP_003548891.1| PREDICTED: uncharacterized protein LOC100803738 [Glycine max]
Length = 2190
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 750 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLS------- 802
Query: 169 PFEQPLIGFSGIVTYS-DGS------------------LLTDFLVVKATSPYNAILGRQW 209
++ P + SG+V + DGS F V+ + Y+ +LGR W
Sbjct: 803 -YQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPW 861
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
IH+ V ST HQ L + + + G++A
Sbjct: 862 IHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 892
>gi|147781714|emb|CAN60825.1| hypothetical protein VITISV_027420 [Vitis vinifera]
Length = 1918
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q ++ +
Sbjct: 510 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVMAYDSTKR 569
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH + +PS+ HQ
Sbjct: 570 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVVVAIPSSLHQ 620
>gi|32488668|emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group]
Length = 1512
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C+ H RH DC KK++ + ++ + K V+V +E P
Sbjct: 429 CSIHKTDRHSLEDCLVFKKWLAKHMASEKGKR-VRV----------------VEKDAEAP 471
Query: 61 EQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
Q +++ + V H+ Y KRE + E
Sbjct: 472 TQELDSAYPDSDVHVSHIFGGSTAYSSKREYKKVER------------------------ 507
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+ P +V+ I N V R+LID GSS+N+L + ++ M + + ++ P +QP F G
Sbjct: 508 RYP----IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQP---FHG 560
Query: 180 IVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTY 220
I S L F V + + YNAI+GR + K
Sbjct: 561 ITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYA 620
Query: 221 HQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 621 YQVLKMPGPKGTITIQGNAKLAVQC 645
>gi|147790268|emb|CAN74495.1| hypothetical protein VITISV_026191 [Vitis vinifera]
Length = 2172
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
+S H L IS+ V +L+DNGS++N+ AT + P Q + +
Sbjct: 599 RSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSBFGPSTQTVRAYDS 658
Query: 180 IVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVPSTYHQ 222
G+L + L+ AT + +N +LGR WIH+ +PS+ HQ
Sbjct: 659 TRREVMGTLEIELLIGPATFVAXFQVLRIPTSFNLLLGRPWIHRAGAIPSSLHQ 712
>gi|147860317|emb|CAN79703.1| hypothetical protein VITISV_040677 [Vitis vinifera]
Length = 1305
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
+L I I V +L+DNGS++N+ T + P Q +I +
Sbjct: 283 SLYIIIGCSGHRVPXVLLDNGSTLNVCPLTTTIALSFASSNFGPSTQIVIAYDNTKREVM 342
Query: 186 GSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D L V++ + +N +LGR WIH++ +PS+ HQ
Sbjct: 343 GTLVIDLLIGTTTFSTLFQVLRISISFNLLLGRPWIHRVVXIPSSLHQ 390
>gi|78708111|gb|ABB47086.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 949
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLK-----EFVKVEDKQP-------------- 41
C +HN H T DC+ ++ I+ I G++K +KV D P
Sbjct: 248 CKWHNSGSHSTNDCKVFRQQIQAAIEGGKIKFDDSKRPMKV-DGNPFPVNMVHTAGRSTD 306
Query: 42 -----------QNQNNFLKKDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREI 90
Q N+ LKK + + Q+ A + K ++V +
Sbjct: 307 GGRTRGFQEVEQESNHRLKKTKPKQEWRVKNQVPTADEATADETKRLAKGKSVVTASVNM 366
Query: 91 E--APEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIG 134
P EF K +D E S KLI SP H L ++ +
Sbjct: 367 AFTLPAEFGIKQADVDEVEEES-----AKLILSPEQAVFEKPEGTENRHLKPLYVNGFVN 421
Query: 135 NCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-------- 186
+ ++++D G++VN++ AT K + + L F G + + G
Sbjct: 422 GKPMSKMMVDGGAAVNLMPYATFRKQGRNAEVLIKTNMVLKDFGGTPSETKGVLNVELTV 481
Query: 187 ---SLLTDFLVVKATSPYNAILGRQWIHKMRVVPST 219
++ T F V+ Y+ +LGR WIH +PST
Sbjct: 482 GSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPST 517
>gi|38344571|emb|CAE05529.2| OSJNBa0053B21.3 [Oryza sativa Japonica Group]
gi|38347235|emb|CAE05030.2| OSJNBa0044M19.17 [Oryza sativa Japonica Group]
Length = 1802
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQ----NQNNFLKK------ 50
C+ HN H DCR +K E + + + E K P N+ K+
Sbjct: 388 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKAPAED 447
Query: 51 --DQIEN-STSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
D +N EP+ V T+ H ++ R++ KRE+ A + + + S
Sbjct: 448 VDDGDDNLGFQEPQATVATVNGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 503
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N +RR+LID G+++NIL A +
Sbjct: 504 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLRRVLIDGGAALNILSPAAFDA 558
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 559 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 617
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 618 LGRPALVKFMAAVHYAYLQM 637
>gi|356551859|ref|XP_003544290.1| PREDICTED: uncharacterized protein LOC100815788 [Glycine max]
Length = 2270
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 830 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLFYQGPPMR 889
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 890 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 949
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 950 STLHQKLKFVRNGRLITVSGEEA 972
>gi|77554860|gb|ABA97656.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 874
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + Q ++ P +QP F GI S
Sbjct: 528 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGILQSELTPTDQP---FHGITPQSSS 584
Query: 187 SLLTD-------------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + + YNAI+G+ + K +QVL
Sbjct: 585 RPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGKTALAKFMAASHYAYQVLKMP 644
Query: 228 TIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 645 GPKGTITIQGNAKLAVQC 662
>gi|356506842|ref|XP_003522184.1| PREDICTED: uncharacterized protein LOC100786848 [Glycine max]
Length = 2243
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 835 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLFYQGPPMR 894
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH+ V
Sbjct: 895 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHEAGAVT 954
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 955 STLHQKLKFVRNGRLITVSGEEA 977
>gi|32489969|emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group]
Length = 598
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
++SF P D + + PH D L+I +I VRRIL+D GSS +++ +M L +
Sbjct: 68 QISFGPDDAEGVLFPHQDPLIILAEIVGFEVRRILVDGGSSADVIIAEAYARMGLPTLAL 127
Query: 168 KPFEQPLIGFSGIVTYSDGSL-------LTD--------FLVVKATSPYNAILGRQWIHK 212
L GF G G + +D F VV YN I GR ++K
Sbjct: 128 TQAPTSLQGFGGEAVQVLGQVQLAVAFGTSDNRREEQILFDVVDIPYNYNTIFGRATLNK 187
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTRNQP 264
+ + + L + G+ + G Q + + + NR + + +P
Sbjct: 188 FKAISHHNYLKLKMPGLAGVIMVKGLQPS--ATSKGDLAAINRAVHNVEAEP 237
>gi|147852234|emb|CAN80136.1| hypothetical protein VITISV_038551 [Vitis vinifera]
Length = 1438
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 323 SNHTRPLYITVGCSRHRVPSVLLDNGSTLNVCLLATTIALGYAPSDFGPSTQTIRAYDST 382
Query: 181 VTYSDGSLLTDFLVVKATSP-----------YNAILGRQWIHKMRVVPSTYHQ 222
G+L+ + L+ AT P +N +LGR+WIH+ V+ S+ HQ
Sbjct: 383 KRDVMGTLMIELLIGPATFPTLFQVLRIPMSFNLLLGRRWIHRAGVILSSLHQ 435
>gi|62734137|gb|AAX96246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550511|gb|ABA93308.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 936
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 102/272 (37%), Gaps = 47/272 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
C H RH DC KK + ++ + K VE D + Q E+ ++
Sbjct: 430 CPIHKSDRHSPEDCLVFKKSHAKHMALEKGKRVRMVEKDAEAATQ---------ESDSAY 480
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLP 113
P+ ++ H+ Y KRE + E + K+ + ++ F
Sbjct: 481 PDSDLHV--------SHIFGGSTAYSSKREYKKVEHEVCSTWQGAVPKMKWSEQKIEFSE 532
Query: 114 QD-LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+D K P +V+ I N V R+LID GSS+ +L +T++ M + + ++ P +Q
Sbjct: 533 EDHPKTAVIPGQYPIVVEPTIRNIKVTRVLIDGGSSIKLLFASTLDAMGIPRSELTPTDQ 592
Query: 173 PLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKM 213
P F GI S L F V + + YNAI+GR + K
Sbjct: 593 P---FHGITPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAELDTAYNAIIGRTALAKF 649
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G I G+ C
Sbjct: 650 MAASHYAYQVLKMSGPKGTITIQGNAKLEVQC 681
>gi|147843786|emb|CAN79456.1| hypothetical protein VITISV_004376 [Vitis vinifera]
Length = 2080
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 544 IVFSDDDLPPEGSGHMRPLYISVGCSGRRVLSVLLDNGSALNVCPLATAIALGYAPSDFG 603
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 604 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 663
Query: 218 STYHQ 222
S+ HQ
Sbjct: 664 SSLHQ 668
>gi|147792188|emb|CAN64138.1| hypothetical protein VITISV_032076 [Vitis vinifera]
Length = 1239
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 490 IVFSDDDLPPEGSDHTRPLYISVGCSGHRVPSVLLDNGSALNVCPLATANALGYAPSDFG 549
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLV-VKATSPYNAILGRQWIHKMRVVPSTYHQ 222
P Q + + G+L + L+ + + N +LGR WIH+ +PS+ HQ
Sbjct: 550 PSTQTVRAYDSTHREVMGTLEIELLIGFEDSYILNLLLGRPWIHRAGAIPSSLHQ 604
>gi|147794981|emb|CAN64988.1| hypothetical protein VITISV_012833 [Vitis vinifera]
Length = 431
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 31/124 (25%)
Query: 105 VQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQ 164
+ + F P D I PH DAL++S+ IG+ R + + +R++
Sbjct: 336 IDGTIIFPPIDPTRILQPHRDALILSLGIGDFDPR--------------EPGADSVRIQ- 380
Query: 165 DKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ + + T VV+ S +NAILGR W+H M+ +PSTYHQ++
Sbjct: 381 -----WSGNHLPWRHCAT-----------VVEDLSSFNAILGRTWLHYMKAIPSTYHQMV 424
Query: 225 CYQT 228
+ T
Sbjct: 425 SFLT 428
>gi|41393197|gb|AAS01920.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108709162|gb|ABF96957.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1149
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 659 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLEDFGGNPS 718
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 719 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 771
>gi|147862860|emb|CAN78943.1| hypothetical protein VITISV_013114 [Vitis vinifera]
Length = 302
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 167 IKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
++P LI GI + DF VV SP+NAILGR ++H M+V PSTYHQ+
Sbjct: 60 LQPHRDVLILMLGISDF-------DFSVVANLSPFNAILGRAYLHGMKVTPSTYHQM 109
>gi|48475133|gb|AAT44202.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1514
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 461 CTVHNTSLHDLVDCRAVKSLAERTRKWEEEKRQERREGKTPAAPAGNRRGEAKQKATAED 520
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 521 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 576
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 577 EVA-----LTFDQTDHPSCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 631
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 632 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 690
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 691 LGRPALVKFMAAVHYAYLQM 710
>gi|356561959|ref|XP_003549243.1| PREDICTED: uncharacterized protein LOC100795062 [Glycine max]
Length = 2323
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 883 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 942
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH V
Sbjct: 943 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGAVT 1002
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 1003 STLHQKLKFVRNGKLITVSGEEA 1025
>gi|260446986|emb|CBG76268.1| OO_Ba0005L10-OO_Ba0081K17.19 [Oryza officinalis]
Length = 1969
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 93 PEEFS----KKCVKLDVQSEVSF-LPQDLKLIQSPHDDA------LVISIKIGNCLVRRI 141
P E+S + V D QS L D + P DD+ L I I + ++
Sbjct: 795 PAEYSVQAADEAVADDEQSSARLQLSPDQAIFDKPVDDSYRHLRPLCIKGFINGRPMTKM 854
Query: 142 LIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------SLLT 190
L+D G++VN++ T K+ + + L F G + + G ++ T
Sbjct: 855 LVDGGAAVNLMPYTTFRKLGKVPEHLIKTNMVLKDFGGNASEAKGVLNVELTVGSKTIPT 914
Query: 191 DFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F V Y+ +LGR WIH VPST HQ L
Sbjct: 915 TFFVFDGKGSYSLLLGRDWIHANCCVPSTMHQCL 948
>gi|356524171|ref|XP_003530705.1| PREDICTED: uncharacterized protein LOC100812971 [Glycine max]
Length = 2270
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 830 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 889
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH V
Sbjct: 890 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGAVT 949
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 950 STLHQKLKFVRNGKLITVSGEEA 972
>gi|147820124|emb|CAN60550.1| hypothetical protein VITISV_040254 [Vitis vinifera]
Length = 1494
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 23 HVHPLYITVGCSGHRVSSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 82
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH + +PS+ HQ
Sbjct: 83 EVMGTLMIDLHIGPATFSTLFQVLRIPTSFNLLLGRPWIHVVGAIPSSLHQ 133
>gi|147765636|emb|CAN73604.1| hypothetical protein VITISV_027524 [Vitis vinifera]
Length = 1250
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I + + V +L+DNG ++N+ TV +
Sbjct: 267 DRATCIVFSDDDLPPEGSNHVRPLFIDVVCSDRRVPSVLLDNGFALNVCPLVTVIALGFS 326
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
+ Q + + G G+L T V++ S +N +LGR WIH+ +PS+ HQ
Sbjct: 327 PADFRASTQIVRAYDGTQRTVMGTLSTH--VLRIQSSFNLLLGRPWIHEAGAIPSSLHQK 384
Query: 224 LCYQTIYGIEEIGGDQ 239
+ + GI I D+
Sbjct: 385 VKFIHEGGIITIQSDR 400
>gi|50897333|gb|AAT85784.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709098|gb|ABF96893.1| hypothetical protein LOC_Os03g33040 [Oryza sativa Japonica Group]
Length = 196
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF P+ + + H D LV+S +I VRRILID GSS +++ T KM L +
Sbjct: 99 ISFGPEHAEGVLFLHQDPLVVSAEIAGFEVRRILIDGGSSADVMFAGTYAKMGLPTLALS 158
Query: 169 PFEQPLIGFSG 179
L GFSG
Sbjct: 159 QAPTSLSGFSG 169
>gi|356566612|ref|XP_003551524.1| PREDICTED: uncharacterized protein LOC100805548 [Glycine max]
Length = 2323
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEK-------MR 161
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+++ MR
Sbjct: 883 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLSYRGPPMR 942
Query: 162 LEQDKIKPFE---QPLIGFSGI-VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
+K F+ + +IG + +T F V+ + Y+ +LGR WIH V
Sbjct: 943 RSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPWIHGAGAVT 1002
Query: 218 STYHQVLCYQTIYGIEEIGGDQA 240
ST HQ L + + + G++A
Sbjct: 1003 STLHQKLKFVRNGKLITVSGEEA 1025
>gi|38605854|emb|CAE03704.3| OSJNBb0034G17.12 [Oryza sativa Japonica Group]
Length = 736
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + + E K P + + + + + +E
Sbjct: 403 CTVHNTSLHDLADCRAVKSLAERMRKWEEERRQERREGKAPAAPSGNRRSEAKQKAPAED 462
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ H ++ R++ KRE+ A + + + S
Sbjct: 463 IDDGDDDLGFQEPGATIATVDGGA--CAHASR-RSLKAMKRELLAAAP-THEATRRARWS 518
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 519 EVA-----LTFDQTDHPPCIARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 573
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++ QP+IG + T+ G + +F V + PYNA+
Sbjct: 574 IKALGMVLR-SSQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 632
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 633 LGRPALVKFMAAVHYAYLQM 652
>gi|147864490|emb|CAN82635.1| hypothetical protein VITISV_008545 [Vitis vinifera]
Length = 1811
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L IS+ V IL+DN S++N+ AT + P Q + +
Sbjct: 557 SDHTRPLYISVGCSGRRVPSILLDNSSTLNVCPLATTIALGYAPSDFGPSTQTVRAYDST 616
Query: 181 -----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+ S + +T F V++ + +N +LGR WIH++ +PS+ HQ
Sbjct: 617 RREVMGTLEIELLISPATFVTVFQVLRIPTSFNLLLGRPWIHRVGAIPSSLHQ 669
>gi|147818826|emb|CAN60724.1| hypothetical protein VITISV_019060 [Vitis vinifera]
Length = 2004
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 647 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 706
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L V++ + +N +LGR WIH+ +P
Sbjct: 707 PTTQTVRAYDSTRREVMGTLEIELLIGPXTFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 766
Query: 218 STYHQ 222
S+ HQ
Sbjct: 767 SSLHQ 771
>gi|147790735|emb|CAN59929.1| hypothetical protein VITISV_023498 [Vitis vinifera]
Length = 1839
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 643 SDHTRPLYITVVCSGHRVPSVLLDNGSALNVCPLATTIALGFAPSDFGPSTQTVRAYDNT 702
Query: 181 VTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L D L V++ + +N +LGR WIH+ +PS+ HQ
Sbjct: 703 QREVMGTLTIDLLIGPTAFSILFQVLRIPTSFNLLLGRPWIHQAGAIPSSLHQ 755
>gi|62734164|gb|AAX96273.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550579|gb|ABA93376.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1263
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF V +D E S KL+ SP H L I+ + +
Sbjct: 467 PAEFGIDQVDVDEVEEES-----AKLVLSPEQAVFEKPEGTDNRHLKPLYINGYVNGKPM 521
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG-----------S 187
++++D G++VN++ AT K+ + + L F G + + G +
Sbjct: 522 SKMMVDGGAAVNLMSYATFWKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGSKT 581
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y +LGR WIH +PST HQ L
Sbjct: 582 IPTTFFVIDGKGSYTLLLGRDWIHANCCIPSTMHQCL 618
>gi|116309405|emb|CAH66481.1| OSIGBa0076I14.2 [Oryza sativa Indica Group]
Length = 710
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 120 QSPHDDAL-VISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
++P DD V+S I N ++R+L+D G+S++I+ A + ++ K++P P+IG +
Sbjct: 511 KAPADDGGDVVSPTIHNVKMKRVLVDGGASLSIISPAAFDALKAPGMKLQP-SLPIIGVT 569
Query: 179 G-----------IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQV 223
VT+ D + DF V PYNA+LGR + K V +
Sbjct: 570 PGHTWPLGHVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGRPALVKFMVATHYAYLQ 629
Query: 224 LCYQTIYGIEEIGGDQATTRTCA 246
+ G I GD CA
Sbjct: 630 MKMSGPAGPITIFGDVKVALACA 652
>gi|77551749|gb|ABA94546.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1665
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
+ + AP+ + + E + + +++ EE S K V L + V P+ ++ H
Sbjct: 704 SVVTAPINMVFTLPAEFGI--NQADVDEVEEESAKLV-LSPEQAVFEKPEG---TENRHI 757
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
L ++ + + ++++D G++VN++ AT K+ + + L F G + +
Sbjct: 758 KPLYVNGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPSET 817
Query: 185 DG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 818 KGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRYWIHANCCIPSTMHQCL 868
>gi|77556683|gb|ABA99479.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1322
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + + + + +T+E
Sbjct: 285 CSMHNTSLHDLADCRVVKSLAERTRKWEEERRQERREGKAPADPAGNRRGEAKQKATAED 344
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P V T+ H ++ R++ KRE+ A + + + + S
Sbjct: 345 VDDGDDDLGFQEPRATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRERWS 400
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 401 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDRGAALNILSPAAFDA 455
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + F V + PYNA+
Sbjct: 456 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVKFDVADLSLPYNAV 514
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 515 LGRPALVKFMAAVHYAYLQM 534
>gi|51038074|gb|AAT93877.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1418
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 853 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 912
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 913 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 965
>gi|38343987|emb|CAD40453.2| OSJNBa0041M21.11 [Oryza sativa Japonica Group]
gi|38343995|emb|CAD40360.2| OSJNBa0093P23.6 [Oryza sativa Japonica Group]
gi|116309171|emb|CAH66269.1| OSIGBa0136B09.5 [Oryza sativa Indica Group]
Length = 1770
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 41/266 (15%)
Query: 4 HNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSEPEQ 62
H RH +C KK +E+ I+ + K VE D + Q E+ ++ P+
Sbjct: 568 HKTDRHSLENCLVFKKLLEKHIAFEKGKRVRVVEKDAEAAAQ---------ESDSAYPDS 618
Query: 63 IVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSFLPQD- 115
++ H+ Y KRE + E + K+ + ++ F +D
Sbjct: 619 DLHV--------SHIFGGSTAYSSKREYKKVEREVCSTWQGAAPKMKWSKQKIEFSEEDH 670
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
K P +V I N V R+LID GSS+N+L + ++ M + + ++ P +QP
Sbjct: 671 PKTAVIPGRYPIVFEPTIQNIKVARVLIDGGSSINLLFASALDAMGIPRSELTPTDQPFH 730
Query: 176 G---------FSGI---VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPST 219
G F I VT+ + F V + + YNAI+GR + K +
Sbjct: 731 GITPQSSSKPFGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFKAASHY 790
Query: 220 YHQVLCYQTIYGIEEIGGDQATTRTC 245
+QVL G + G+ C
Sbjct: 791 AYQVLKMPRPKGTITVQGNAKLAVQC 816
>gi|147807312|emb|CAN77534.1| hypothetical protein VITISV_030456 [Vitis vinifera]
Length = 452
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I PH +AL++++ I + + R L G+ N + ++ + + D ++ + L
Sbjct: 310 IPQPHRNALILTLGICDFNLGRPLASIGNQANGIH--ALQSIEPKADIVR-IQWGLNNLP 366
Query: 179 GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
+ D S D SP+NAILG W+H M+V+ STYHQ++ Y T + G
Sbjct: 367 WRLRVVDPSKPKDL------SPFNAILGCTWLHNMKVIHSTYHQMVSYLTKDRHIDHYGS 420
Query: 239 QATTRTC 245
Q R C
Sbjct: 421 QLAARQC 427
>gi|147772367|emb|CAN73430.1| hypothetical protein VITISV_031216 [Vitis vinifera]
Length = 1206
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 101 VKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
+ +D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 588 MTVDRATCIVFSADDLPPEGSDHTRPLYITVVCSGHRVLSVLLDNGSALNVCPLATAIVL 647
Query: 161 RLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQW 209
P Q + + G+L D L V++ +N +LGR W
Sbjct: 648 GFAPSDFGPSTQTVRAYDSTQREVMGTLTIDLLIGPTTFSILFQVLRIPVSFNLLLGRPW 707
Query: 210 IHKMRVVPSTYHQ 222
IH+ +PS+ HQ
Sbjct: 708 IHQAGAIPSSLHQ 720
>gi|21743003|emb|CAD40096.1| OSJNBb0012A12.6 [Oryza sativa Japonica Group]
gi|38347024|emb|CAE02552.2| OSJNBb0069N01.26 [Oryza sativa Japonica Group]
Length = 243
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 93 PEEFSKKCVKLDVQSEVS---FLPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF + +D E S L + + + P H L I+ + + ++++
Sbjct: 6 PAEFEARQADVDEVEETSARLVLSPEQAVFEKPEGTENWHLKPLYINGYVNGKPMSKMMV 65
Query: 144 DNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDGSL-----------LTD 191
D G++VN++ AT K+ R D IK L F G + + G L T
Sbjct: 66 DGGAAVNLMPYATFRKLGRNSYDLIKT-NMVLKDFGGNPSETKGVLNVELTVGSKTVPTT 124
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 125 FFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 157
>gi|27819497|gb|AAO24901.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 801
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K + +++ + + +E
Sbjct: 468 CTVHNTSLHDLADCRVVKSLAERTRKWEEERRQERREGKSSAVPSGNRRREAKQKAPAED 527
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 528 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 583
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 584 EVA-----LTFDQTDHPSCVARGGQVAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 638
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 639 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 697
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 698 LGRPALVKFMAAVHYAYLQM 717
>gi|78708458|gb|ABB47433.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1016
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + +I++D G+ VN++ AT K+ + + L F G +
Sbjct: 373 HLKPLYINGYVNGMPLSKIMVDGGAVVNLMPYATFRKLGRNSEDLIKTNMVLKDFGGNPS 432
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G L T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 433 ETKGVLNVELTVGSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQCL 485
>gi|77554529|gb|ABA97325.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 236
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + + ++ P +QP F GI S
Sbjct: 42 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQP---FHGITPQSSS 98
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ F V K + YNAI+GR + K +QVL
Sbjct: 99 KPMGKITLPMTFGQANNFRTEQITFDVAKFDTAYNAIIGRTALVKFMAASHYAYQVL 155
>gi|147793104|emb|CAN73091.1| hypothetical protein VITISV_041303 [Vitis vinifera]
Length = 1065
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD------ 191
V +L+DNGS++N+ AT + P Q + + G+L+ D
Sbjct: 22 VPSVLLDNGSALNVCPLATTVALGFAPSDFGPSTQTVRAYDSTKREVIGTLVIDLQIGPT 81
Query: 192 -----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
F V++ + +N +LGR WIH+ V+PS+ HQ
Sbjct: 82 AFFTLFQVLRIPTSFNLLLGRPWIHRAGVIPSSLHQ 117
>gi|38345754|emb|CAE03482.2| OSJNBa0065O17.7 [Oryza sativa Japonica Group]
Length = 3331
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 2169 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERREGKAPAAPAGNRRGETKQKATAED 2228
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 2229 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKSMKRELLAAAP-THEATRRARWS 2284
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 2285 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 2339
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ + ++ QP+IG + T+ G + DF VV + PYNA+
Sbjct: 2340 IKAPRMVLR-LSQPIIGVTPGHTWPLGHIDLPVTFGSSANFRTDRVDFDVVDLSLPYNAV 2398
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 2399 LGRPALVKFMAAVHYAYLQM 2418
>gi|18581535|gb|AAK52540.2|AC078891_9 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|110288541|gb|ABG65889.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1580
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H L I+ + + ++++D G++VN++ AT K+ + + L F G
Sbjct: 360 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 419
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+T ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 420 ETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQCL 472
>gi|28269460|gb|AAO38003.1| putative polyprotein [Oryza sativa Japonica Group]
gi|28875996|gb|AAO60005.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709647|gb|ABF97442.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1911
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + + K P + + + + +T+E
Sbjct: 475 CTMHNTSLHDLADCRAVKSLAERTRKWEEEKRQERRDGKTPAAPADNRRGEAKQKATTED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFGA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ + P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLWP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRMERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|50881459|gb|AAT85304.1| reverse transcriptase (RNA-dependent DNA polymerase) domain
containing protein [Oryza sativa Japonica Group]
gi|108708517|gb|ABF96312.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H L I+ + + ++++D G++VN++ AT K+ + + L F G
Sbjct: 433 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNVEDLIKTNMVLKDFGGNPS 492
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+T + ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 493 ETKGVLNVELTVGNKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWQGDK 552
Query: 232 IEEIGGDQA 240
I+ + D+A
Sbjct: 553 IQIVPADRA 561
>gi|57863833|gb|AAW56879.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2050
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 461 CTVHNTSLHDLVDCRAVKSLAERTRKWEEEKRQERREGKTPAAPAGNRRGEAKQKATAED 520
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 521 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 576
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 577 EVA-----LTFDQTDHPSCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 631
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 632 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 690
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 691 LGRPALVKFMAAVHYAYLQM 710
>gi|21672097|gb|AAM74459.1|AC124213_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 858
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + +I++D G+ VN++ AT K+ + + L F G +
Sbjct: 362 HLKPLYINGYVNGMPLSKIMVDGGAVVNLMPYATFRKLGRNSEDLIKTNMVLKDFGGNPS 421
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G L T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 422 ETKGVLNVELTVGSKTVPTTFFVIDRKGSYSLLLGRDWIHANCCIPSTMHQCL 474
>gi|77555035|gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1564
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------ 179
ALV+S I N ++R+L+D G+S+NI+ A + ++ K++P P+IG +
Sbjct: 360 ALVVSPTIHNVKMKRVLVDGGASLNIISPAAFDALKAPGMKLQP-SLPIIGVTPGHTWPL 418
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGR 207
+VT+ D + DF V PYNA+LGR
Sbjct: 419 GHVELLVTFGDSTNFRTERIDFDVADLNLPYNAVLGR 455
>gi|147770996|emb|CAN71312.1| hypothetical protein VITISV_015012 [Vitis vinifera]
Length = 456
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 174 LIGFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
L GF+G T S G +L FLVV SPYNAI+GR W + M+ + TY+Q
Sbjct: 115 LFGFNGATTTSLGDXVLXVQVGPVTLNVQFLVVNDLSPYNAIMGRAWFYIMKFIRFTYYQ 174
Query: 223 VLC 225
+L
Sbjct: 175 MLA 177
>gi|90265165|emb|CAH67733.1| H0522A01.4 [Oryza sativa Indica Group]
gi|116310746|emb|CAH67541.1| H0425E08.9 [Oryza sativa Indica Group]
Length = 1756
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 35/248 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + ++ + E K P + + + +T+E
Sbjct: 398 CTVHNTSLHDLADCRAVKSLAERTRKWEEERKQERREGKAPAAPAGNRRGEAKQKATAED 457
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H +++ ++ KRE+ A + + + S
Sbjct: 458 IDDDDDDLGFQEPEATVATVDGGAC--AHASRQ-SLKAMKRELLAAAP-THEATRRARWS 513
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H +V+S + N + R+LID G+++NIL A +
Sbjct: 514 EVA-----LTFDQTDHPPCVARGGQITMVVSPTVCNVKLGRVLIDRGAALNILSPAAFDA 568
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---LTDFLVVKATSPYNAILGRQWIHK-MRV 215
++ ++P QP++G + T+ G + DF V + PYNA+LGR + K M
Sbjct: 569 IKALGMVLRP-SQPIVGVTPGHTWPLGHIDLPRVDFDVADLSLPYNAVLGRPVLVKFMAA 627
Query: 216 VPSTYHQV 223
V Y Q+
Sbjct: 628 VHYAYLQM 635
>gi|359493386|ref|XP_003634582.1| PREDICTED: uncharacterized protein LOC100256836 [Vitis vinifera]
Length = 1239
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 129 ISIKIGNCLVRRI---LIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
+ I +G CL RR+ L+DNGS++N+ AT + P Q + +
Sbjct: 1037 LYITVG-CLGRRVSSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKREVM 1095
Query: 186 GSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + ++ +LGR WIH +PS+ HQ
Sbjct: 1096 GTLMIDLQIGPATFSTLFQVLRIPASFSLLLGRPWIHVAGAIPSSLHQ 1143
>gi|38347370|emb|CAE04960.2| OSJNBa0070D17.11 [Oryza sativa Japonica Group]
Length = 1646
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + + E K P + + + +T+E
Sbjct: 362 CSVHNTSLHDLADCRAVKSLAERMRKWEEERRQERREGKAPAAPAGNRRGEAKQKATAED 421
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P+ V T+ R++ KRE+ A + + ++ S
Sbjct: 422 IDDGDDDLGFQEPDATVATVDGGACAHASC---RSLKAMKRELLAAAP-THEAIRRARWS 477
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 478 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDT 532
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 533 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSTNFRTERVNFDVADLSLPYNAV 591
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 592 LGRPALVKFMAAVHYAYLQM 611
>gi|77554253|gb|ABA97049.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 47/286 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ + K D+ D +
Sbjct: 534 CPHHPNSNHSAKDCFVYKQFAEQYAKNAR-----KASDRDQSTSKKKDDDDDAPTGFQDH 588
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E R +REI A V+ D + + +K
Sbjct: 589 CKELNHIFGGPLAYE----SRRKQKLTEREINA--------VQPDTPQYLRWSETAIKFD 636
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK--- 168
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 637 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKLSN 696
Query: 169 -PFEQPLIGFSGI--------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRV 215
PF + G S VT+ + + T+ F V + Y+ ILGR + K
Sbjct: 697 APFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHGILGRPALAKFMA 756
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 757 VPHYTYMMMKMPGPRGVISLRSDIKQAITC-----DKESCEMAQTR 797
>gi|147854958|emb|CAN82405.1| hypothetical protein VITISV_002115 [Vitis vinifera]
Length = 662
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 26/182 (14%)
Query: 66 TIMAPLPL-----EVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+I AP L + +T Y + R++ A + V L + F D+
Sbjct: 217 SIXAPFSLIPDRVSLXLTPSTPSYVRHRDMFASFILWPENVDLIGPLALCFFVDDIPPEG 276
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L I++ V +L+DNGS +N+ ATV P Q
Sbjct: 277 SDHTRPLYITVVCLGYRVSSVLLDNGSILNVCSLATVVAHDFAPSDCGPSTQ-------- 328
Query: 181 VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
+V++ + +N +LGR WIH+ R +PS+ H+ + ++E+G D +
Sbjct: 329 ------------IVLRIPTSFNLLLGRPWIHRARAIPSSLHRK-GLEVHPRVKEMGVDDS 375
Query: 241 TT 242
T
Sbjct: 376 TV 377
>gi|147783641|emb|CAN61609.1| hypothetical protein VITISV_042499 [Vitis vinifera]
Length = 2112
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 52/267 (19%)
Query: 2 AFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIEN------ 55
A+H + H T C L+ +++LI +G L V P N +FL+ D+I++
Sbjct: 83 AYHQEPGHETDRCTALRHVVQDLIDQG-LVHLVP----PPANDIHFLEFDEIDDHIHMLS 137
Query: 56 -STSEPEQIVNTIM-----------APLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKL 103
S+ E I+ ++ P P + + + +V E +S + +
Sbjct: 138 DDDSDLEPIMXGVIYEMSGVTLGPRTPAPFRL-VPEAASVQAATVEPLILPHYSVRTPFI 196
Query: 104 ---DVQS--EVSFLPQDLKLIQSP------------HDDALVISIKIGNCLVRRILIDNG 146
DV+ ++ ++ + ++++ P H L IS+ V +L+DNG
Sbjct: 197 LIPDVEETLDIQYVLRGGRVMRQPPPVAASQLRGSDHTRPLYISVGCSGRRVPSVLLDNG 256
Query: 147 SSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-------- 198
S++N+ AT + P Q + + G+L + L+ AT
Sbjct: 257 SALNVCPLATAIALGYAPSDFGPSTQIVRAYDSTRREVMGTLEIELLIGPATFVAVFQVL 316
Query: 199 ---SPYNAILGRQWIHKMRVVPSTYHQ 222
+ +N +L R WIH+ R +PS+ +Q
Sbjct: 317 RILTSFNLLLSRPWIHRARAIPSSLNQ 343
>gi|224128574|ref|XP_002329037.1| predicted protein [Populus trichocarpa]
gi|222839708|gb|EEE78031.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV- 181
H L + KI + L+DNG++VNIL +E + + P + GFSG V
Sbjct: 79 HIKPLYLCAKIKGEETGKELVDNGTAVNILPRNMLEVIEKTVGDLTPTRVVISGFSGKVL 138
Query: 182 --------TYSDGSLL--TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ SL T F +V YN +L WIH +PST HQ+L
Sbjct: 139 QAKRMIEVSFKLDSLTAQTMFFIVDTVPNYNVLLENDWIHVNDCIPSTLHQML 191
>gi|38347264|emb|CAE05311.2| OSJNBa0056L23.9 [Oryza sativa Japonica Group]
Length = 836
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 17/152 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FSGIVTYSD 185
LV+ + N +RR LID GS++NIL T++ M++ + +++P P G G+
Sbjct: 632 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELRPSNAPFHGVIPGLSATPL 691
Query: 186 GSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
G + F V + Y+AILGR + K VP + ++
Sbjct: 692 GQITLPVTFGTRENFRTENICFEVADFETAYHAILGRLALAKFMAVPHYTYMMMKMPGPR 751
Query: 231 GIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
G+ + D TC Q RE+ S R
Sbjct: 752 GVLSLRSDIKQAVTCDKESCEMAQTREMASAR 783
>gi|108862615|gb|ABA97725.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 842
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 30/179 (16%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDA--------------LVISIKIGNCLV 138
P EF K +D E S KLI SP L I+ + +
Sbjct: 193 PAEFGIKQADIDEVEEES-----AKLILSPEQAVFDKPEGTENRYLKPLYINGYVNGKPM 247
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGS 187
++++D G+ VN++ AT+ K+ + + L F G +T + +
Sbjct: 248 SKMMVDGGAVVNLMPYATLRKLGRNAEDLIKTNMVLKDFGGNPSETKGVLNVELTVGNKT 307
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
+ T F V+ Y+ +LGR WIH PST HQ L IE + D++ A
Sbjct: 308 IPTTFFVIDGKGSYSLLLGRDWIHANCCFPSTMHQCLIQWQGDKIEIVPADRSVNVASA 366
>gi|359489281|ref|XP_003633904.1| PREDICTED: uncharacterized protein LOC100852807 [Vitis vinifera]
Length = 2158
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I++ V +L+DNGS++N+ AT +
Sbjct: 662 DRATCIVFSDDDLPPEGSDHTHPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGYA 721
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFLVVKATSP-----------YNAILGRQWIHK 212
Q + + G+L+ + ++ T P +N +LGR WIHK
Sbjct: 722 PSDFGTSTQTVRAYDSTKREVMGTLMIELMIGPTTFPILFQVLRIPTSFNLLLGRPWIHK 781
Query: 213 MRVVPSTYHQ 222
+PS+ HQ
Sbjct: 782 AGAIPSSLHQ 791
>gi|359482754|ref|XP_003632828.1| PREDICTED: uncharacterized protein LOC100852681 [Vitis vinifera]
Length = 1965
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS +N+ AT +
Sbjct: 406 IIFSDDDLPPEGSGHARPLYISVGCSGRRVPSVLLDNGSVLNVCPLATAIALGYAPSDFG 465
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR WIH+ VP
Sbjct: 466 PSTQTVRAYDITRREVMGTLEIELLIGPTTFITIFQVLRIPTSFNLLLGRPWIHRAGAVP 525
Query: 218 STYHQ 222
S+ HQ
Sbjct: 526 SSLHQ 530
>gi|358343522|ref|XP_003635850.1| hypothetical protein MTR_012s0030 [Medicago truncatula]
gi|355501785|gb|AES82988.1| hypothetical protein MTR_012s0030 [Medicago truncatula]
Length = 328
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 157 VEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAIL 205
++K+ L +KP + L + G S G++ D FLVV + S YN +L
Sbjct: 39 LKKIGLSDYDLKPHDVVLSNYEGKYGSSFGAINVDLVVGITKRETLFLVVASKSNYNLLL 98
Query: 206 GRQWIHKMRVVPSTYHQVL 224
GR+WIH + VPST HQ L
Sbjct: 99 GREWIHGVGAVPSTMHQRL 117
>gi|147800846|emb|CAN73211.1| hypothetical protein VITISV_040705 [Vitis vinifera]
Length = 1187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L ISI V +L++NGS++N+ AT +
Sbjct: 129 IVFSYDDLPLEGSNHTRPLYISIDCSGHRVSSVLLNNGSALNVYPLATAIALGYAPSDFG 188
Query: 169 PFEQPLIGFSG----IVTYSDGSLLTD-------FLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + +++ + LL D F V++ +N +LGR WIH++ +P
Sbjct: 189 PSNQIVRAYDNTRREVMSTLEIELLIDPTTFITVFQVLRIPISFNPLLGRPWIHRVGAIP 248
Query: 218 STYHQ 222
+ HQ
Sbjct: 249 YSLHQ 253
>gi|255552457|ref|XP_002517272.1| conserved hypothetical protein [Ricinus communis]
gi|223543535|gb|EEF45065.1| conserved hypothetical protein [Ricinus communis]
Length = 127
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
I + H+DALV+ I N LVR ILID+ SS+N++ M L+ + + P IG
Sbjct: 49 ILNSHNDALVVKAYINNFLVRWILIDDKSSINMITMPVFLSMGLKHNHLTLVSTPFIGLG 108
Query: 179 GIVTYSDGSLLTD 191
G +GS+ D
Sbjct: 109 GKTILVEGSIHLD 121
>gi|147841478|emb|CAN62106.1| hypothetical protein VITISV_033315 [Vitis vinifera]
Length = 2351
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 459 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 518
Query: 169 PFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + + + + F V++ + +N +LGR WIH+ +P
Sbjct: 519 PSTQTVRAYDSTRREVMSTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 578
Query: 218 STYHQ 222
S+ HQ
Sbjct: 579 SSLHQ 583
>gi|356523173|ref|XP_003530216.1| PREDICTED: uncharacterized protein LOC100814220 [Glycine max]
Length = 2280
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T+ ++
Sbjct: 840 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLGQLS------- 892
Query: 169 PFEQPLIGFSGIVTYS-DGS------------------LLTDFLVVKATSPYNAILGRQW 209
++ P + SG+V + DGS F V+ + Y+ +LGR W
Sbjct: 893 -YQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQAAYSCLLGRPW 951
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
IH+ V ST HQ L + + + G++A
Sbjct: 952 IHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 982
>gi|147785235|emb|CAN77389.1| hypothetical protein VITISV_013681 [Vitis vinifera]
Length = 2282
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 695 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 754
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH +P
Sbjct: 755 PSTQTVRXYDSTRREVMGTLEIELLIGPATFVAVVQVLRIPTSFNLLLGRPWIHXAGAIP 814
Query: 218 STYHQ 222
S+ HQ
Sbjct: 815 SSLHQ 819
>gi|356551733|ref|XP_003544228.1| PREDICTED: uncharacterized protein LOC100816508 [Glycine max]
Length = 2311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF ++L H+ AL IS+ + + +L+D GSS+N++ +T++++
Sbjct: 871 LSFSDEELPEEGRNHNLALHISVNCKSDALSNVLVDTGSSLNVMAKSTLDQLS------- 923
Query: 169 PFEQPLIGFSGIVTYS-DGS------------------LLTDFLVVKATSPYNAILGRQW 209
++ P + SG+V + DGS F V+ Y+ +LGR W
Sbjct: 924 -YQGPPMRRSGVVVKAFDGSRKSVIGEVDLPITIGPFVFQITFQVMDIQVAYSCLLGRPW 982
Query: 210 IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQA 240
IH+ V ST HQ L + + + G++A
Sbjct: 983 IHEAGAVTSTLHQKLKFVRNGRLITVSGEEA 1013
>gi|24796790|gb|AAN64467.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108709267|gb|ABF97062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1152
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H L I+ + + ++++D G++VN++ AT K+ + + L F G
Sbjct: 738 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPL 797
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+T ++ T F V+ Y+ +LGR WIH +PST H L
Sbjct: 798 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANYCIPSTMHHCL 850
>gi|147852075|emb|CAN80167.1| hypothetical protein VITISV_018430 [Vitis vinifera]
Length = 94
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQ 239
F VV+ SP+N ILG W+ M+ +PSTYHQ++ Y T G ++ G Q
Sbjct: 44 FSVVENLSPFNDILGHTWLDGMKAIPSTYHQMVSYLTEDGQIDLYGSQ 91
>gi|147845557|emb|CAN82723.1| hypothetical protein VITISV_004793 [Vitis vinifera]
Length = 2115
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 707 IVFSDDDLPPEGSSHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 766
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L V++ +N +LGR WIH+ +P
Sbjct: 767 PSTQTVRAYDSTRREVMGTLEIELLIGPTTFVVVFQVLRIPISFNLLLGRPWIHRAGAIP 826
Query: 218 STYHQ 222
S+ HQ
Sbjct: 827 SSLHQ 831
>gi|147805489|emb|CAN65175.1| hypothetical protein VITISV_029768 [Vitis vinifera]
Length = 1622
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ C V +L+DN S++N+ AT + P Q + +
Sbjct: 258 HVRPLYITVGCLGCRVPSVLLDNDSTLNVCPLATAIALGFAPSDFGPSTQTVREYDSTKR 317
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 318 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 368
>gi|108708678|gb|ABF96473.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1275
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 73/263 (27%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH H T CR +++ +G ++ P+ Q + + +E
Sbjct: 411 CTFHGRSSHTTEQCRNIRQ-------RGNAQD--------PRTQ---------QGAVAEA 446
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS------------- 107
+ + AP P E +R V ++ P + SK+ K+ +++
Sbjct: 447 TREIAQEQAP-PTEQRQDAQRRVIQVITRVDPPIQLSKRQKKMQLRTVHNITLAGEGTPQ 505
Query: 108 ----EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
++ F P+D++ + PH D LVISI+I V I +A KM L
Sbjct: 506 YLNQQIFFGPEDVEGVMFPHQDPLVISIEIAGFEV------------IFAEAYA-KMGLT 552
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ P L GFSG IV + G + F +V YNAI GR
Sbjct: 553 TQALTPAPTSLRGFSGEAVQVLGQAQLIVAFGTGENRREEQVLFDIVDIPYNYNAIFGRA 612
Query: 209 WIHKMRVVPSTYHQVLCYQTIYG 231
++K + ++H L + +YG
Sbjct: 613 TLNKFEAI--SHHNYLKLK-MYG 632
>gi|37700339|gb|AAR00629.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1445
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI------ 180
+V+ I N V R+LID GSS+N+L + ++ M + + ++ P +QP G + +
Sbjct: 490 IVVEPTIRNINVARVLIDGGSSMNLLFASALDAMGIPRSELTPTDQPFHGITPLSSSKPL 549
Query: 181 ------VTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ + F V + YNAI+GR + K + +Q+L
Sbjct: 550 GKITLPVTFRQANNFRTEQITFDVAEFVIAYNAIIGRTALAKFKAASHYTYQMLKMLGPK 609
Query: 231 GIEEIGGDQATTRTC 245
G I G+ T C
Sbjct: 610 GTITIQGNAKLTVQC 624
>gi|38344604|emb|CAD39962.2| OSJNBa0072D08.9 [Oryza sativa Japonica Group]
Length = 880
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
K + +P +V+ I N V R+LID G+S+N+L T++ M + + ++ P +QP
Sbjct: 727 KTVVTPGRYPIVVEPTIRNIKVARVLIDGGNSINLLFANTLDAMGILRSELTPTDQP--- 783
Query: 177 FSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
F GI+ S L F V + + YNAI+GR + K
Sbjct: 784 FHGIIPQSSSKPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAAS 843
Query: 218 STYHQVL 224
+QVL
Sbjct: 844 YYAYQVL 850
>gi|38345832|emb|CAE01862.2| OSJNBa0070M12.15 [Oryza sativa Japonica Group]
Length = 1685
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ T K+ + + L F G +
Sbjct: 736 HLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRTTEDLMKTNMVLKDFGGNPS 795
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 796 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 848
>gi|14018077|gb|AAK52140.1|AC084380_13 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1201
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 73/263 (27%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C FH H T CR +++ +G ++ P+ Q + + +E
Sbjct: 337 CTFHGRSSHTTEQCRNIRQ-------RGNAQD--------PRTQ---------QGAVAEA 372
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS------------- 107
+ + AP P E +R V ++ P + SK+ K+ +++
Sbjct: 373 TREIAQEQAP-PTEQRQDAQRRVIQVITRVDPPIQLSKRQKKMQLRTVHNITLAGEGTPQ 431
Query: 108 ----EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
++ F P+D++ + PH D LVISI+I V I +A KM L
Sbjct: 432 YLNQQIFFGPEDVEGVMFPHQDPLVISIEIAGFEV------------IFAEAYA-KMGLT 478
Query: 164 QDKIKPFEQPLIGFSG-----------IVTYSDGSLLTD----FLVVKATSPYNAILGRQ 208
+ P L GFSG IV + G + F +V YNAI GR
Sbjct: 479 TQALTPAPTSLRGFSGEAVQVLGQAQLIVAFGTGENRREEQVLFDIVDIPYNYNAIFGRA 538
Query: 209 WIHKMRVVPSTYHQVLCYQTIYG 231
++K + ++H L + +YG
Sbjct: 539 TLNKFEAI--SHHNYLKLK-MYG 558
>gi|38344129|emb|CAD39841.2| OSJNBb0072N21.8 [Oryza sativa Japonica Group]
Length = 1790
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L + ++ M + + K+ P +QP F GI S
Sbjct: 793 IVVEPTIRNIKVARVLIDGGSSINLLFASALDAMGIPRSKLTPTDQP---FHGITPQSSS 849
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + + YNAI+GR + K +QVL
Sbjct: 850 KPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRIALAKFMAASHYTYQVLKMP 909
Query: 228 TIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 910 GPKGTITILGNTKLAIQC 927
>gi|147765948|emb|CAN60602.1| hypothetical protein VITISV_022279 [Vitis vinifera]
Length = 1046
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL--------- 188
V +++DNGS++NI AT + PF Q + + G+L
Sbjct: 196 VLSVILDNGSALNICPLATTIALGYASSDFGPFTQTVKAYDNTKREVIGTLEIELLIGLT 255
Query: 189 --LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V++ + +N +LGR +IH++R +PS+ HQ++
Sbjct: 256 IFPTMFQVLRIPTSFNLLLGRPYIHRVRAIPSSLHQMV 293
>gi|51854384|gb|AAU10764.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1743
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 46/243 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 348 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERREGKTPAAPAGNRRGEAKQKATAED 407
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 408 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 463
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 464 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 518
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 519 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 577
Query: 205 LGR 207
LGR
Sbjct: 578 LGR 580
>gi|77554915|gb|ABA97711.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 604
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 109/293 (37%), Gaps = 62/293 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E Q N K + STS
Sbjct: 283 CPHHPNSNHAAKDCFVYKQFAE-------------------QYAKNARKASDGDQSTS-- 321
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPE-----EFSKKCVKLDVQSEVSFLPQD 115
+ + AP + H + +++ E+ E+ V+LD + +
Sbjct: 322 -KKDDDDDAPTGFQDHRKELNHIFGGPLTYESKRKQKLTEWEINTVQLDTPQYLRWSETT 380
Query: 116 LKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+K +S H D LV+ + N +RR L+D G+++NIL T++ M++ + ++
Sbjct: 381 IKFDRSDHPDRVVHPGRYPLVLDPVVRNIKLRRSLMDGGNALNILFAKTMDDMQIPRTEL 440
Query: 168 KPFEQPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQ 208
KP P F G++ +LL F V + Y+AILG
Sbjct: 441 KPSNAP---FHGVIRGLSATLLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGCP 497
Query: 209 WIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
+ K VP + ++ G+ + + TC K+ E+ TR
Sbjct: 498 ALAKFMAVPHYTYMMMKMPGPRGVISLWSNIKQAVTC-----DKERCEMAQTR 545
>gi|77553849|gb|ABA96645.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1645
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + +I++D G++VN++ AT K+ + + L F G +
Sbjct: 596 HLKPLYINGYVNGKPMSKIMVDGGAAVNLMPYATFRKLGRNAEDLIRTNMVLKDFGGNPS 655
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH VPST Q L
Sbjct: 656 ETKGVLNVEMTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCVPSTMQQCL 708
>gi|108705673|gb|ABF93468.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1800
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C HN H DCR +K E + + + E K P + ++ Q EP
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPSGNRRRFQ------EP 528
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+ T+ H + R++ KRE+ A + + + SEV+ L Q
Sbjct: 529 RATIATVDGGAC--AHACR-RSLKAMKRELLAAAP-THEATRRARWSEVA-----LTFDQ 579
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+ H A+V+S + N + R+LID G+++NIL A + ++ ++P Q
Sbjct: 580 TDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQ 638
Query: 173 PLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVV 216
P+IG + T+ G + +F V + PYNA+LGR + K M V
Sbjct: 639 PIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAV 698
Query: 217 PSTYHQV 223
Y Q+
Sbjct: 699 HYAYLQM 705
>gi|147786974|emb|CAN60085.1| hypothetical protein VITISV_012518 [Vitis vinifera]
Length = 1119
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L ISI V +L+DNGS++N+ AT +
Sbjct: 9 IVFSDDDLPPEGSDHTRPLYISICCSGRRVPSVLLDNGSALNVCPLATAITLGYALSDFC 68
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + G+L + L+ AT + +N +LG+ WIH++ +P
Sbjct: 69 PSTQTFRTYDSTKRKVMGTLEIELLIGPATFIAVFQVLRIPTSFNLLLGQPWIHRVGAIP 128
Query: 218 STYHQ 222
S+ HQ
Sbjct: 129 SSLHQ 133
>gi|38567757|emb|CAE76044.1| B1248C03.3 [Oryza sativa Japonica Group]
gi|38569163|emb|CAE75872.1| OSJNBa0042N22.17 [Oryza sativa Japonica Group]
Length = 1436
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
L I+ + + ++++D G++VN++ T K+ + + L F G + + G
Sbjct: 889 LYINGYVNGKPMSKMMVDGGAAVNLMPYTTFRKLGRNAEDLIRMNMVLKDFGGNSSETKG 948
Query: 187 -----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 949 VLNVELTVGSKTIPTSFFVIDGKGSYSLLLGRDWIHVNCCIPSTMHQCL 997
>gi|22795280|gb|AAN08252.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 792
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 561 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 612
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 613 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 660
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 661 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 720
Query: 170 FEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGR 207
P G G+ G + F V + Y+AILGR
Sbjct: 721 SNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGR 774
>gi|46359902|gb|AAS88834.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1937
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA HN H DCR +K + + + + E K P + + + + + +E
Sbjct: 462 CAVHNTSLHDLADCRAVKSLAKRTRKWEEERRQERREGKAPAAPSGNRRSEAKQKAPAED 521
Query: 61 EQIVNTIMAPLPLEV---------HMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSF 111
+ + L + H ++ R++ KRE+ A + + + SEV+
Sbjct: 522 IDDGDDDLGSLGATIATVDGGACAHASR-RSLKAMKRELLAAAP-THEATRQTRWSEVA- 578
Query: 112 LPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
L Q+ H A+V+S + N + R+LID G+++NIL A + ++
Sbjct: 579 ----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAP 634
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQ 208
++P QP+IG + T+ G + +F V + PYNA+LGR
Sbjct: 635 GMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRP 693
Query: 209 WIHK-MRVVPSTYHQV 223
+ K M V Y Q+
Sbjct: 694 ALVKFMAAVHYAYLQM 709
>gi|147862955|emb|CAN82997.1| hypothetical protein VITISV_013264 [Vitis vinifera]
Length = 982
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+I + V +L+DNGS++N+ AT + P Q + +
Sbjct: 597 HVRPLYITIGCSSRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 656
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 657 EVMGTLVIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 707
>gi|15217203|gb|AAK92547.1|AC051624_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431038|gb|AAP52876.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1963
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + + + +T+E
Sbjct: 475 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKATAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P V T+ V R++ KRE+ A + + + S
Sbjct: 535 VDDGDDDLGFQEPGATVATVDGGACAHV---SRRSLKAMKRELLAVAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + L +F V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTLGHTWPLGHIDLPVTFGGSANFRTELVNFDVAGLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|77551417|gb|ABA94214.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1917
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G++VN++ AT K+ + + L F G +
Sbjct: 844 HLKPLYINGYVNGNPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNTS 903
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH + ST HQ L
Sbjct: 904 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCISSTMHQCL 956
>gi|147806152|emb|CAN76697.1| hypothetical protein VITISV_009720 [Vitis vinifera]
Length = 1003
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 83/234 (35%), Gaps = 59/234 (25%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C++H H T C L+ I++LI +G V QP N
Sbjct: 493 CSYHQGPGHDTNHCTALRHAIQDLIDQGL------VNLGQPSVTTN-------------- 532
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD-VQSEVSFLPQDLKLI 119
PL H T A S +D ++ + LP D
Sbjct: 533 -----------PLPAHST------------HAVHPSSGDIHHMDLIEDDNDDLPPD---- 565
Query: 120 QSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG 179
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 566 GLDHVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDS 625
Query: 180 IVTYSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 626 TKREVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 679
>gi|50878478|gb|AAT85251.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1863
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 46/243 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + + + +T+E
Sbjct: 381 CSVHNTSLHDLVDCRAVKSLAERTRKWEEERRQERREGKAPVAPAGNRRGEAKQKATAED 440
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 441 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 496
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 497 EVA-----LTFDQTDHSPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 551
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 552 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 610
Query: 205 LGR 207
LGR
Sbjct: 611 LGR 613
>gi|19920096|gb|AAM08528.1|AC068654_30 Hypothetical protein with similarity to putative retroelement
[Oryza sativa Japonica Group]
Length = 548
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 31/194 (15%)
Query: 76 HMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIK--- 132
H+ + VY KRE KK + ++ + Q ++ H A +IS +
Sbjct: 302 HIFRGSIVYSSKREY-------KKVEREGAAPKMKWSEQKIEFSDEDHRKAAIISGRYPI 354
Query: 133 -----IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG-------- 179
I N V +L+D GSS+N+L +T++ M + + ++ P +QP G +
Sbjct: 355 VVEPTIRNIKVALVLVDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPLG 414
Query: 180 ----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
VT+ S F V + + YNAI+GR + K ++VL G
Sbjct: 415 KITLPVTFGQASNFRTKQITFHVAEFDTAYNAIIGRTALVKFMAASHYAYEVLKMPGPKG 474
Query: 232 IEEIGGDQATTRTC 245
I G+ C
Sbjct: 475 TITIQGNAKLAVQC 488
>gi|147863985|emb|CAN80489.1| hypothetical protein VITISV_039325 [Vitis vinifera]
Length = 2093
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 104 DVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLE 163
D + + F DL S H L I++ V +L+DNG ++N+ AT +
Sbjct: 614 DRATCIVFSADDLPPEGSDHTRPLYITVVCSGHRVPSVLLDNGFALNVCPLATAMALGFA 673
Query: 164 QDKIKPFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHK 212
P Q + + G+L D L V++ + +N +LGR WIH+
Sbjct: 674 PSDFGPSTQTVRAYDNTQREVMGTLTIDLLIGPTTFSILFQVLRIPASFNLLLGRPWIHQ 733
Query: 213 MRVVPSTYHQ 222
+PS HQ
Sbjct: 734 AGAIPSFLHQ 743
>gi|147778034|emb|CAN69736.1| hypothetical protein VITISV_041904 [Vitis vinifera]
Length = 1633
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 192 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 251
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 252 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 302
>gi|77552305|gb|ABA95102.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2096
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 140 RILIDNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDG-----------S 187
++L+D G++VN++ T K+ ++ +D IK L F G + + G +
Sbjct: 870 KMLVDGGAAVNLMPYTTFRKLGKVPEDLIKT-NMVLKDFGGNASEAKGVLNVELTVGSKT 928
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V Y+ +LGR WIH VPST HQ L
Sbjct: 929 IPTTFFVFDGKGSYSLLLGRDWIHANCCVPSTMHQCL 965
>gi|32489471|emb|CAE05825.1| OSJNBa0028M15.17 [Oryza sativa Japonica Group]
Length = 1218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 32/158 (20%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K D E + KLI SP H L I+ + +
Sbjct: 297 PTEFGMKQADADEVEE-----ESAKLILSPEQAVFEKPEGTENRHLKPLYINGYVNGKPM 351
Query: 139 RRILIDNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDGSL--------- 188
++++D G+ VN++ AT K+ R +D IK L F G + + G L
Sbjct: 352 SKMMVDGGAVVNLMPYATFRKLGRNAEDLIKT-NMVLKDFGGNPSETKGGLNVELTVGNK 410
Query: 189 --LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V+ Y+ +LGR WIH +PS HQ L
Sbjct: 411 TIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSAMHQCL 448
>gi|147854838|emb|CAN82416.1| hypothetical protein VITISV_039154 [Vitis vinifera]
Length = 402
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFL---- 193
V+ +L++NGS++N+ ATV + Q L ++ G+L D L
Sbjct: 299 VQSVLLNNGSALNVYPLATVVTLDFAPSDFGSSTQTLRAYNSTQREVMGTLTIDLLIGLT 358
Query: 194 -------VVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
V++ S ++ +LGR WIH+ R +PS+ HQ
Sbjct: 359 TFSILFQVLRIPSFFDLLLGRPWIHQARAIPSSLHQ 394
>gi|32488514|emb|CAE03266.1| OSJNBa0011J08.21 [Oryza sativa Japonica Group]
Length = 452
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIV 181
P +V+ I N V R+L+D GSS+N+L T++ M + + ++ P +QP F GI
Sbjct: 22 PGRYPIVVEPTIRNIKVARVLVDGGSSINLLFAGTLDAMGIPRSELTPTDQP---FHGIT 78
Query: 182 TYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
S L F V + + YNAI+GR + K +Q
Sbjct: 79 PQSSSKPLGKITLPVTFGQANNFRMEQITFDVAEFDTAYNAIIGRTALTKFMAASHYAYQ 138
Query: 223 VL 224
VL
Sbjct: 139 VL 140
>gi|32487595|emb|CAE04481.1| OSJNBa0029L02.22 [Oryza sativa Japonica Group]
Length = 774
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + +++++ G++VN++ AT K+ + + L F G ++
Sbjct: 201 HLKPLYINGYVNGKPMSKMMVNGGATVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNLS 260
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G L + F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 261 KTKGVLNVELTVGSKTIPAIFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 313
>gi|31432134|gb|AAP53804.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1765
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 51/262 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + K + E K P + + +T+E
Sbjct: 411 CTVHNTFLHDLADCRAVKSLAERMRKWEEEKRQERREGKTPAAPAGNRRGKAKQKATAED 470
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREI--EAPEEFSKKCVKLDV 105
PE IV T+ H ++ R++ KRE+ AP + + +
Sbjct: 471 VDDGDDDLGFQEPEAIVATVDGGAC--AHASR-RSLKAMKRELLTAAPTHEATRRARW-- 525
Query: 106 QSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATV 157
SEV+ L Q+ H A+V+S + N + R+LID G+++NIL A
Sbjct: 526 -SEVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAF 579
Query: 158 EKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYN 202
+ ++ +P QP+IG + T+ G + DF V + PYN
Sbjct: 580 DAIKAPGMVRRP-SQPIIGVTPGHTWLLGHIDLPVTFGGSANFRTERVDFDVADLSLPYN 638
Query: 203 AILGRQWIHK-MRVVPSTYHQV 223
A+LGR + K M V Y Q+
Sbjct: 639 AVLGRPALVKFMAAVHYAYLQM 660
>gi|53981175|gb|AAV24815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 140 RILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL----------- 188
++L+D G++VN++ T +K D + + L F G T + G L
Sbjct: 551 KMLVDGGAAVNLMPYVTFKKSGRSADDLIKTKMVLKDFGGNHTETKGVLNVELTVGSKIV 610
Query: 189 LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V+ Y+ +LGR WIH +PST H L
Sbjct: 611 PTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHHSL 646
>gi|62733316|gb|AAX95433.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|77549989|gb|ABA92786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1414
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V R+L+D G+S+N+L +T++ M + + ++ P +QP G +
Sbjct: 526 IVVEPTIWNVKVARVLVDGGNSINLLFASTLDAMGIPRGELTPTDQPFHGITPQSSSKPL 585
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+T+S S F V + + YNAI+G+ + K +QVL
Sbjct: 586 GKITLPMTFSQASNFRTEQITFDVAEFDTAYNAIIGKTALAKFMAASHYAYQVL 639
>gi|147805417|emb|CAN67439.1| hypothetical protein VITISV_020352 [Vitis vinifera]
Length = 929
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L I + + V IL+DNGS++N+ AT +
Sbjct: 180 IVFSYDDLPPEGSDHTHRLYIFVSCSSRRVPSILLDNGSALNVCPLATTIAIGYAPFDFG 239
Query: 169 PFEQPLIGFSGIVTYSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + G+L +T F V++ + +N +LGR W HK R +P
Sbjct: 240 PSTQTVRAYDNTRKKVMGTLEIELLIGPATFITVFQVLRIPTSFNLLLGRPWNHKARAIP 299
Query: 218 STYHQ 222
S+ H+
Sbjct: 300 SSLHR 304
>gi|147788977|emb|CAN71602.1| hypothetical protein VITISV_008050 [Vitis vinifera]
Length = 700
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L++N S++N+ AT + P Q + G G T
Sbjct: 466 HVRPLYITVGCSGRRVPSVLLENDSTLNVCPLATAIALGFAPSDFGPSTQTVQGI-GPAT 524
Query: 183 YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+S T F V++ + +N +LG+ WIH +PS++HQ
Sbjct: 525 FS-----TLFQVLRIPTSFNLLLGQPWIHIAGAIPSSFHQ 559
>gi|108707947|gb|ABF95742.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1926
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 435 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 494
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P IV T+ V R++ KRE+ A + + + S
Sbjct: 495 IDDGDDDLGFQEPGAIVATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 550
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 551 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 605
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 606 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 664
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 665 LGRPALVKFMAAVHYAYLQM 684
>gi|62732751|gb|AAX94870.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77549365|gb|ABA92162.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 498
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
A+V+S + N + R+LID G+++NIL A + ++ ++P QP+IG + T+
Sbjct: 43 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 101
Query: 186 GSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVVPSTYHQV 223
G + +F V + PYNA+LGR + K M V Y Q+
Sbjct: 102 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQM 155
>gi|356570125|ref|XP_003553241.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
K02A2.6-like [Glycine max]
Length = 985
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 81 RNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLP-QDLKLIQSPHDDA------LVISIKI 133
RN+ + ++ S +++ V F P +++ + P DD L ++ +
Sbjct: 61 RNILSDYAREDYFDDLSLSLMEVWVTQVSYFTPHRNVAVFDPPTDDMRCYVKLLHLTAIV 120
Query: 134 GNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-- 191
N ++ +IL+D G++ NIL + + K + + P + F G S+ + D
Sbjct: 121 QNQIINKILVDGGAAFNILPRSMLRKFCKSVEDLIPHNIVVSDFCGKPLDSERLVCLDVL 180
Query: 192 ---------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
FLV+ + + + +L R+WIHK+ VPS HQ L +
Sbjct: 181 VGCRERPTVFLVISSQANFYMLLVREWIHKVGAVPSLVHQKLFF 224
>gi|108707293|gb|ABF95088.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1965
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K +E + + + E K P + + + + + +E
Sbjct: 475 CTVHNTSLHDLADCRAVKNLVERTRKWEEERRQERREGKSPAVPSGHRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWQLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|53749349|gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1862
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C HN H DCR +K E + K + E KQ + + + EP
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERREAKQKATAED-IDDGDDDLGFQEP 533
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
E V T+ H ++ R++ KRE+ A + + + SEV+ L Q
Sbjct: 534 EATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWSEVA-----LTFDQ 584
Query: 121 SPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ 172
+ H A+V+S + N + R+LID G+++NIL A + ++ ++P Q
Sbjct: 585 TDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKATGMVLRP-SQ 643
Query: 173 PLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVV 216
P+IG + T+ G + DF V + PYNA+LGR + K M V
Sbjct: 644 PIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAVLGRPALVKFMAAV 703
Query: 217 PSTYHQV 223
Y Q+
Sbjct: 704 HYAYLQM 710
>gi|77550989|gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1498
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQP----LIGFSG--- 179
LV+ + + N ++R LID GS++NIL T++ M++ + ++KP P + G S
Sbjct: 638 LVLDLVVRNVKLQRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHSVIPGLSATPL 697
Query: 180 -----IVTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
+VT+ + S T+ F V + Y+AILGR + K VP + ++
Sbjct: 698 GQITLLVTFGTRESFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPR 757
Query: 231 GIEEIGGDQATTRTC 245
G+ + D TC
Sbjct: 758 GVISLRSDIKQAVTC 772
>gi|4263831|gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 102 KLDVQS-EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
++D QS + F ++ + ++ HDDALV+++ + N V RILID GSSV+++ +T+E+M
Sbjct: 401 EVDFQSTSILFDEKETQHLERSHDDALVVTLDVANFEVSRILIDTGSSVDLIFLSTLERM 460
Query: 161 RLEQDKI 167
+ + +
Sbjct: 461 GISRADV 467
>gi|147836186|emb|CAN75430.1| hypothetical protein VITISV_009273 [Vitis vinifera]
Length = 1842
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 461 HVRPLYITVGCSGRRVXSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 520
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ +N +LGR WIH +PS+ HQ
Sbjct: 521 EVMGTLMIDLQIGPATFSTLFQVLRIPXSFNLLLGRPWIHVAGAIPSSLHQ 571
>gi|359488408|ref|XP_003633755.1| PREDICTED: uncharacterized protein LOC100852570 [Vitis vinifera]
Length = 2061
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 582 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 641
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 642 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 692
>gi|359490135|ref|XP_003634039.1| PREDICTED: uncharacterized protein LOC100249206 [Vitis vinifera]
Length = 2085
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 641 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 700
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 701 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 751
>gi|116308907|emb|CAH66039.1| H0515C11.15 [Oryza sativa Indica Group]
gi|116309145|emb|CAH66246.1| OSIGBa0101A01.2 [Oryza sativa Indica Group]
Length = 1369
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 51/251 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFV-KVEDKQPQNQNNFLKKDQIENST 57
C H H DC KK +E+ ++ KG+ V K ++ PQ E+ +
Sbjct: 309 CPIHKTDIHSLEDCLVFKKSLEKQMAFEKGKRVRVVEKNKETAPQ-----------ESDS 357
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
+ P+ ++ H Y KRE + E + K+ + ++ F
Sbjct: 358 AYPDSDLHV--------SHTFGGSTTYSSKREYKKVEREVCSTWQGAAPKMKWSEQKIEF 409
Query: 112 LPQDL-KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
+D K P +V+ I N V R+LID GSS+N+L +T++ M + Q ++ P
Sbjct: 410 SEEDHPKTAVIPGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSELTPT 469
Query: 171 EQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIH 211
QP F GI S L F V + + YNAI+GR +
Sbjct: 470 NQP---FHGITPQSSSRPLGKIMLPVTFGQANNFRTKQITFDVAEFDTAYNAIIGRTALA 526
Query: 212 KMRVVPSTYHQ 222
K +Q
Sbjct: 527 KFMATSHYAYQ 537
>gi|19920077|gb|AAM08509.1|AC068654_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 2058
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G+++N++ AT K+ + + L F G +
Sbjct: 1082 HLKPLYINDYVNGKPMSKMMVDGGAALNLMLYATFRKLGRNAEDLIKTNMVLKDFGGNPS 1141
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR W+H +PST HQ L
Sbjct: 1142 ETKGVLNVELTVGGKTIPTTFFVIDGKGSYSLLLGRDWVHANCCIPSTMHQCL 1194
>gi|116309688|emb|CAH66736.1| H0404F02.12 [Oryza sativa Indica Group]
Length = 780
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 87 KREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLV 138
KREI A + + + ++ SE++ +K +S H D LV+ + + N +
Sbjct: 622 KREINAVQPNTPQYLRW---SEIA-----IKFDRSDHPDRVVHPGRYPLVLDLVVRNVKL 673
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FSGIVTYSDGSLLTD------ 191
RR LID GS++NIL T++ M++ + ++KP P G G+ G +
Sbjct: 674 RRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPFGQITIPVTFGTR 733
Query: 192 ---------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
F V + Y+AILGR + K VP + ++
Sbjct: 734 ENFRTENICFEVADFETAYHAILGRLALTKFMAVPHYTYMMM 775
>gi|147791320|emb|CAN61329.1| hypothetical protein VITISV_014250 [Vitis vinifera]
Length = 566
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 97 SKKCVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDAT 156
S +C + + + F D H L IS+ V +L+DNGS++N+ AT
Sbjct: 185 SSRCPQTPRATCIVFFDDDFPPEGLGHICPLYISVACSGHRVLIVLLDNGSTLNVYPLAT 244
Query: 157 VEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD-----------FLVVKATSPYNAIL 205
+ P Q + + G G + T F V+K S +N +L
Sbjct: 245 TIALGFSPSNFGPSTQTVRAYDGTQRTVMGIITTHVMIGPVRYSVLFQVLKIQSSFNLLL 304
Query: 206 GRQWIHKMRVVPSTYHQ 222
G WIH+ +PS+ HQ
Sbjct: 305 GCPWIHEADAIPSSLHQ 321
>gi|38344116|emb|CAE01723.2| OSJNBb0050O03.13 [Oryza sativa Japonica Group]
Length = 2030
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
CA HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 475 CAVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P V T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATVATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFCTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|147823143|emb|CAN73027.1| hypothetical protein VITISV_016263 [Vitis vinifera]
Length = 2270
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 135 NCLVRRI---LIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL--- 188
C RR+ L+DNGS++N+ AT + P Q + + G+L
Sbjct: 580 GCSSRRVPTVLLDNGSTLNVCPLATTIVLGYVPSNFSPSTQTVHLYDSTRREVMGTLEIE 639
Query: 189 --------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
+T F V++ + +N +LGR WIHK R +PS+ HQ
Sbjct: 640 LLIGLATFVTVFQVLRIPTSFNLLLGRPWIHKARPIPSSLHQ 681
>gi|12583800|gb|AAG59652.1|AC084319_10 putative polyprotein [Oryza sativa Japonica Group]
Length = 340
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVSF---LPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L D + + P H L I+ + + ++++
Sbjct: 69 PAEFGVKQADVDEVEEESAKLTLSPDQTVFEKPEGTEHRHLKPLYINGYVNGKPMSKMMV 128
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGSLLTDF 192
D G++VN++ T K+ + + L F G +T + ++ T
Sbjct: 129 DGGAAVNLMPYTTFRKLGRNAEDLIKTNLVLKDFGGNPSETKGVLNVELTVGNKTIPTTL 188
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ Y+ +LGR WIH +PST HQ L
Sbjct: 189 FVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 220
>gi|77551564|gb|ABA94361.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1342
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
LV+ + N +RR LID GS++NIL T++ M++ + ++KP P F ++
Sbjct: 666 LVLDPMVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNTP---FHRVIPRLSA 722
Query: 187 SLLTD-------------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
+ L F V +PY+AILGR + K VP + ++
Sbjct: 723 TPLGQITLPVTFGTRENFRIENVCFEVADFETPYHAILGRPALAKFMAVPHYTYMMMKMP 782
Query: 228 TIYGIEEIGGDQATTRTC 245
G+ + D TC
Sbjct: 783 GPRGVISLRSDIKQAVTC 800
>gi|62733374|gb|AAX95491.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77550247|gb|ABA93044.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 640
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 27/154 (17%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
LV+ + N +RR LID GS++NIL ++ M++ + ++KP P F G++
Sbjct: 438 LVLDPVVRNVKLRRSLIDGGSALNILFAKMLDDMQIPRTELKPSNAP---FHGVIPGLSS 494
Query: 187 SLLTD-------------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
+ L+ F VV + Y+AILGR + K VP + ++
Sbjct: 495 TPLSQITLPVAFGTRENFRTENICFEVVDFETAYHAILGRPALAKFMAVPYYTYMMMKMP 554
Query: 228 TIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G+ + D TC K++ E+ TR
Sbjct: 555 GPRGVISLRSDIKQAVTC-----DKESCEMAQTR 583
>gi|77548425|gb|ABA91222.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1059
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G+ VN++ T K+ D + L F G +
Sbjct: 409 HLKPLYINGFVNGKPMSKMMVDGGAVVNLMPYTTFRKLGKNPDDLIKTNMILKDFGGNPS 468
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ G L T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 469 ETKGVLNVELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCLIQWHGDK 528
Query: 232 IEEIGGD---QATTRTCASN 248
IE + D Q R C ++
Sbjct: 529 IEIVLADRPYQQPPRRCKAD 548
>gi|116317798|emb|CAH65837.1| OSIGBa0124C14.4 [Oryza sativa Indica Group]
Length = 1802
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQ--IENSTS 58
C H + H +DC K++ E+ K K D++ Q+ KKD I
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTIRKNTDEE---QSTSRKKDDGDIPAGFQ 712
Query: 59 EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+ + +N I PL E +R +REI A + + + ++ SE++ +K
Sbjct: 713 DHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----IK 760
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 761 FDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKP 820
Query: 170 FEQPLIG 176
P G
Sbjct: 821 SNAPFHG 827
>gi|147859767|emb|CAN81055.1| hypothetical protein VITISV_032525 [Vitis vinifera]
Length = 1548
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 726 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 785
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 786 EVMGTLMIDLQIGPATFSTLFQVLRIPASFNLLLGRPWIHVAGAIPSSLHQ 836
>gi|77552457|gb|ABA95254.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 823
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 53/254 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ K K D++ Q+ KKD +
Sbjct: 588 CPHHPNSNHVAKDCFVYKQFAEQYT-----KTTRKNSDEE---QSTSRKKDDGDTPAGFQ 639
Query: 59 -EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
+++ + PL E +R +REI A + + + ++ SE++ +K
Sbjct: 640 DHRKELNHIFGGPLAYE----SKRKRKLTEREINAVQPDTPQYLRW---SEIA-----IK 687
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S + D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 688 FDRSDYPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKT 747
Query: 170 FEQPLIGFSGIVTYSDGSLLT-------------------DFLVVKATSPYNAILGRQWI 210
P F G++ + L F V + Y+AILGR +
Sbjct: 748 SNAP---FHGVIPRLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPAL 804
Query: 211 HKMRVVPSTYHQVL 224
K VP + ++
Sbjct: 805 AKFMAVPHYTYMMM 818
>gi|147815585|emb|CAN65973.1| hypothetical protein VITISV_000704 [Vitis vinifera]
Length = 703
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 133 IGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD- 191
C V +L+DNGS++N+ T + Q + + G G+L T
Sbjct: 384 FAGCRVPSVLLDNGSALNVYPLVTAIALGFSPSDFGSSTQTVRAYDGTQRTVMGTLTTHV 443
Query: 192 ----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
F V++ S +N +LG WIH+ V+PS+ HQ
Sbjct: 444 MIGPVRYSILFQVLRIQSSFNLLLGHPWIHEAGVIPSSLHQ 484
>gi|147832775|emb|CAN65896.1| hypothetical protein VITISV_027695 [Vitis vinifera]
Length = 2204
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H IS+ V +L+DNGS++N+ A +
Sbjct: 621 IIFSDDDLPPEGSDHTRPFYISVGCSGRRVPSVLLDNGSALNVCPLAIAIALGYAPSDFG 680
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 681 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 740
Query: 218 STYHQ 222
S+ HQ
Sbjct: 741 SSLHQ 745
>gi|147841863|emb|CAN66924.1| hypothetical protein VITISV_011828 [Vitis vinifera]
Length = 294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 116 LKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
+ ++QS H+DAL++++++ VRRIL+D GS N+L + ++M +K + L
Sbjct: 192 VSVLQS-HEDALILTLRVCGFDVRRILVDPGSLANLLQMSAYKQMGYLPSTLKNSGRLLS 250
Query: 176 GFSGIVTYSDG-----------SLLTDFLVVKATSPYNAILG 206
F+ T S G +L FLVV PYNAI+G
Sbjct: 251 RFNEATTTSLGDVVLPVKTGSVTLNVRFLVVDDLFPYNAIIG 292
>gi|147776753|emb|CAN61427.1| hypothetical protein VITISV_031730 [Vitis vinifera]
Length = 2196
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +J+DN S++N+ AT +
Sbjct: 706 IVFSDDDLPPEGSDHTRPLYISVGCSGRRVPSVJLDNXSALNVCPLATAIALGYAPSDFG 765
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR WIH+ +P
Sbjct: 766 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPWIHRAGAIP 825
Query: 218 STYHQ 222
S HQ
Sbjct: 826 SXLHQ 830
>gi|147838855|emb|CAN65682.1| hypothetical protein VITISV_012797 [Vitis vinifera]
Length = 345
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 174 LIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYH 221
L+GF+G T S G ++ VV SP+NAI R W+H M+V+PSTYH
Sbjct: 287 LLGFNGASTTSLGDIVLSIQVGLVTLNVQLSVVXDLSPFNAISRRTWLHNMKVIPSTYH 345
>gi|147811572|emb|CAN67636.1| hypothetical protein VITISV_031868 [Vitis vinifera]
Length = 432
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
+AL++S+ IG+ VR+IL+D GS ++L + +++M ++ + L GF+ S
Sbjct: 292 NALILSLGIGDFDVRQILVDLGSLTDLLQVSVIKQMGFVSSSLENMGRILXGFNRASATS 351
Query: 185 DGSLLTDFLVVKATSPYNAILGRQW--IHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATT 242
G VV L Q+ +H M+ +PST HQ++ + T G ++ Q
Sbjct: 352 LGD------VVLPVQAGLVTLNVQFSVLHCMKTIPSTCHQMVSFLTKDGQIDLYDSQLVA 405
Query: 243 RTCASNGMGKQNRELGSTRNQ 263
C + RE GS+ ++
Sbjct: 406 WQCY-----QIAREAGSSNDR 421
>gi|108710942|gb|ABF98737.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 763
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q KKD +++ +
Sbjct: 575 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNARKPSDG---DQGISKKKDDEDDAPTGF 626
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 627 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 674
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + +K
Sbjct: 675 KFDRSDHPDRVVHPGQYPLVLDPVVRNVKLRRTLIDGGSTLNILFAKTLDDMQIPRTGLK 734
Query: 169 PFEQPLIG 176
P P G
Sbjct: 735 PSNAPFHG 742
>gi|147804865|emb|CAN78055.1| hypothetical protein VITISV_001308 [Vitis vinifera]
Length = 1901
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 689 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 748
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 749 EVMGTLVIDLQIGPTRFSTLFQVLRIPTSFNLLLGRPWIHVAGAIPSSLHQ 799
>gi|34015123|gb|AAQ56321.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015133|gb|AAQ56330.1| hypothetical protein OSJNBa0095C12.21 [Oryza sativa Japonica Group]
Length = 760
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E S KLI SP H L I+ + +
Sbjct: 379 PAEFGIKQADVDEVEEES-----AKLILSPEHAVFEKPEGTENRHLKPLYINGYVNGKPM 433
Query: 139 RRILIDNGSSVNILDDATVEKM-RLEQDKIK-----------PFEQPLIGFSGIVTYSDG 186
++++D G++VN++ T K+ R +D IK P E + + +T +
Sbjct: 434 SKMMVDGGAAVNLMPYTTFRKLGRNAEDLIKTNMVLKDFGSNPSETKEV-LNVELTVGNK 492
Query: 187 SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 493 TIPTTFSVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 530
>gi|147823200|emb|CAN68612.1| hypothetical protein VITISV_021131 [Vitis vinifera]
Length = 317
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 194 VVKATSPYNAILGRQWIHKMRVVPSTYHQVLCY 226
+V SPYNAI+G W+H+M+ + STYHQ++ Y
Sbjct: 241 LVDNLSPYNAIMGHAWLHRMKAILSTYHQMVSY 273
>gi|20177635|gb|AAM14690.1|AC097446_19 Putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 684
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
LV+S I N ++R+L+D G+S++I+ A + ++ + K++P P+IG +
Sbjct: 257 LVVSPTIHNVKMKRVLVDGGTSLSIISLAAFDALKAPRMKLQP-SLPIIGVTPGHTWPLG 315
Query: 180 ----IVTYSDGSLL----TDFLVVKATSPYNAILGR 207
VT+ D + DF V PYNA+LGR
Sbjct: 316 HVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGR 351
>gi|62734445|gb|AAX96554.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550443|gb|ABA93240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1701
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK----PFEQPLIGFSGI-- 180
LV+ + N +RR LID GS++NIL T++ M + + ++K PF + G S
Sbjct: 654 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMLIPRSELKSSNAPFHGVIPGLSATPL 713
Query: 181 ------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ + + T+ F + + Y+AILGR + K VP + ++
Sbjct: 714 GQITLPVTFGTRENFRTENICFQIADFETAYHAILGRPALAKFMAVPYYTYMMMKMPGPQ 773
Query: 231 GIEEIGGDQATTRTCASNGMG-KQNRELGSTR 261
G+ + D TC Q RE+ S R
Sbjct: 774 GVLSLWSDIKQAVTCDKESCEMAQTREMASAR 805
>gi|110288621|gb|AAP52180.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 650
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
LV+S I N ++R+L+D G+S++I+ A + ++ + K++P P+IG +
Sbjct: 223 LVVSPTIHNVKMKRVLVDGGTSLSIISLAAFDALKAPRMKLQP-SLPIIGVTPGHTWPLG 281
Query: 180 ----IVTYSDGSLL----TDFLVVKATSPYNAILGR 207
VT+ D + DF V PYNA+LGR
Sbjct: 282 HVELPVTFGDSTNFRTERIDFDVADLNLPYNAVLGR 317
>gi|147845510|emb|CAN80607.1| hypothetical protein VITISV_033525 [Vitis vinifera]
Length = 1357
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 409 HVRPLYITVGCSGRKVPSVLLDNGSALNVCPLATTIALGFAPSDFGPSTQTVRAYDSTKR 468
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
G+L+ D F +++ + +N +LGR WIH +P + HQ IY
Sbjct: 469 EVMGTLMIDLRIGPATFSILFQILRIPTSFNLLLGRPWIHIAGAIPFSLHQKCGLPGIY 527
>gi|147820364|emb|CAN69840.1| hypothetical protein VITISV_008391 [Vitis vinifera]
Length = 1996
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + Q + +
Sbjct: 607 HVRPLYITVGCSGRRVPSVLLDNGSALNVCLLATAIALGFASSDFGLSTQTVRAYDSTKK 666
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH R +PS+ HQ
Sbjct: 667 EVMGTLMIDLQIGPTTFSTLFQVLRIPTSFNLLLGRPWIHVARAIPSSLHQ 717
>gi|29893597|gb|AAP06851.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108707306|gb|ABF95101.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1918
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQ----NQNNFLKK------ 50
C+ HN H DCR +K E + + + E K P N+ K+
Sbjct: 473 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKAPAED 532
Query: 51 --DQIEN-STSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
D +N EP+ V T+ H ++ R++ KRE+ A + + + S
Sbjct: 533 VDDGDDNLGFQEPQATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 588
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N +RR+LID G+++NI A +
Sbjct: 589 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLRRVLIDGGAALNIHSPAAFDA 643
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 644 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 702
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 703 LGRPALVKFMAAVHYAYLQM 722
>gi|147861002|emb|CAN82934.1| hypothetical protein VITISV_032369 [Vitis vinifera]
Length = 500
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L I+I V L+DNGS N+ AT P Q + +
Sbjct: 168 SDHTRPLYITIGCSGHKVSSFLLDNGSDFNVFPLATAIAFSYAPSDFGPSTQTVRAYDNT 227
Query: 181 VTYSDGSLLTDFLVVKATSP-----------YNAILGRQWIHKMRVVPSTYHQ 222
G+L+ + L+ T P +N +LGR WIH++ + S+ HQ
Sbjct: 228 KREVMGTLMIELLIGPTTFPILFQVLRIPISFNLLLGRPWIHRVEAILSSLHQ 280
>gi|38567643|emb|CAE75881.1| B1234D02.5 [Oryza sativa Japonica Group]
Length = 970
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H L I+ + + ++++D G++VN++ AT K+ + + L F G
Sbjct: 794 HLKPLNINGYVNGKPMSKMMVDGGTAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPL 853
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+T + ++ T F V+ Y+ +LGR WI+ +PS HQ L
Sbjct: 854 ETKGVLNVELTVGNKTITTTFFVIDGKGSYSLLLGRDWINANCCIPSIMHQCLIQWQGDK 913
Query: 232 IEEIGGDQATTRTCA 246
IE + D++ A
Sbjct: 914 IEIVPADRSVNVASA 928
>gi|50428709|gb|AAT77060.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 732
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 31/211 (14%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLK--------KDQ 52
C+ HN +H DCR++K +E K K + E K P N + D
Sbjct: 365 CSVHNTYQHSLADCRSVKNLVERF-RKADEKRQNRREGKAPATPANDWRGEAKKKAPADD 423
Query: 53 IENSTSEPEQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAP---------EEFSKKCVK 102
++S QI +A L E T R + E+ A +S+ +
Sbjct: 424 GDDSEDLEFQIPQGTVATLDREACAHTSRRGFKVTRCELLAAVPTHKAARKARWSEVKLT 483
Query: 103 LDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRL 162
D + L + KL ALV+S I N ++R+L+D +S++I+ A + ++
Sbjct: 484 FDQSDHPTMLARGGKL-------ALVVSPTIHNVKMKRVLVDGEASLSIISPAAFDALKA 536
Query: 163 EQDKIKPFEQPLIGFSGIVTYSDGSLLTDFL 193
K++P P+IG VT S L FL
Sbjct: 537 PGMKLQP-SLPIIG----VTSGHESALVSFL 562
>gi|147774137|emb|CAN65549.1| hypothetical protein VITISV_001618 [Vitis vinifera]
Length = 1553
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNG ++N+ AT +
Sbjct: 600 IVFSDDDLPPEGSDHTHPLYISVGCSGRRVSSVLLDNGLALNVCPLATAIALEYAPSDFG 659
Query: 169 PFEQPLIGFSGI-----------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVP 217
P Q + + + S + +T F V++ + +N +LG+ WIH+ +P
Sbjct: 660 PSTQTVRAYDNTRREVMGTLEIELLISPTTFVTVFQVLRILTSFNLLLGQPWIHRAGAIP 719
Query: 218 STYHQ 222
+ HQ
Sbjct: 720 YSLHQ 724
>gi|108709390|gb|ABF97185.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1767
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 20/152 (13%)
Query: 93 PEEFSKKCVKLDVQSEVSF---LPQDLKLIQSP------HDDALVISIKIGNCLVRRILI 143
P EF K +D E S L D + + P H L I+ + + ++++
Sbjct: 732 PAEFGVKQADVDEVEEESAKLTLSPDQTVFEKPEGTEHRHLKPLYINGYVNGKPMSKMMV 791
Query: 144 DNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGSLLTDF 192
D G++VN++ T K+ + + L F G +T + ++ T
Sbjct: 792 DGGAAVNLMPYTTFRKLGRNAEDLIKTNLVLKDFGGNPSETKGVLNVELTVGNKTIPTTL 851
Query: 193 LVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
V+ Y+ +LGR WIH +PST HQ L
Sbjct: 852 FVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 883
>gi|29788855|gb|AAP03401.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 792
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q KKD +++ +
Sbjct: 604 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNARKPSDG---DQGISKKKDDEDDAPTGF 655
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 656 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 703
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + +K
Sbjct: 704 KFDRSDHPDRVVHPGQYPLVLDPVVRNVKLRRTLIDGGSTLNILFAKTLDDMQIPRTGLK 763
Query: 169 PFEQPLIG 176
P P G
Sbjct: 764 PSNAPFHG 771
>gi|147864890|emb|CAN79371.1| hypothetical protein VITISV_028500 [Vitis vinifera]
Length = 351
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 118 LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGF 177
+ PH+D L+++++I V R+LI +GS ++L + +M L ++ E+ L GF
Sbjct: 250 FVLQPHEDILILTLRISGFDVXRVLIYSGSLTDLLQMSPYRQMGLLPSDLENLERILSGF 309
Query: 178 SGIVTYS-DGSLL----------TDFLVVKATSPYNAILG 206
+G +T S + +L F VV+ S +NAI+G
Sbjct: 310 NGAITTSLEDDILPFQACPITQNMRFFVVEDLSHFNAIMG 349
>gi|77550764|gb|ABA93561.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 682
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 51/253 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYI--EELISKGQLKEFV-KVEDKQPQNQNNFLKKDQIENST 57
C H +HY C KK + + + KG+ V KV + Q+ ++ + S
Sbjct: 441 CPIHKSDKHYLETCFVFKKALVKQLALKKGKRVRVVEKVAEATTQDSDSTYPDSDLHVS- 499
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
HM Y KRE + E + K+ + ++ F
Sbjct: 500 ------------------HMFGGSTAYSSKREYKRVEREVCSTWQGAASKMKWSEQKIEF 541
Query: 112 L-PQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
D K +P +V+ I N R+LID GSS+N+ +T++ M + + ++ P
Sbjct: 542 SEADDPKTAVTPGRYPIVVEPTIRNIKFARVLIDGGSSINLHFASTLDAMGIPRSELTPT 601
Query: 171 EQPLIGFSGIVTYSDGSLLTD-------------------FLVVKATSPYNAILGRQWIH 211
+QP F GI S L F V + + YNAI+GR +
Sbjct: 602 DQP---FHGITPQSSSKPLGKITLPMTFSQANNFRTEQITFDVAEFDTAYNAIIGRIALA 658
Query: 212 KMRVVPSTYHQVL 224
K +Q+L
Sbjct: 659 KFMAASHYAYQIL 671
>gi|147845703|emb|CAN79903.1| hypothetical protein VITISV_019550 [Vitis vinifera]
Length = 438
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD------ 191
V +L+DNGS +NI ATV Q + ++ G+L+ D
Sbjct: 159 VPSVLLDNGSDLNICPLATVVAFGFAPSDFGSSTQIVRAYNSTKREVMGTLVIDLQIGPA 218
Query: 192 -----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
F V++ + +N +LGR WIH+ V+PS+ HQ
Sbjct: 219 TFSTLFPVLRIPTSFNLLLGRPWIHRAGVIPSSLHQ 254
>gi|38344492|emb|CAE05171.2| OSJNBa0013A04.8 [Oryza sativa Japonica Group]
gi|38347297|emb|CAE02473.2| OSJNBa0042D13.26 [Oryza sativa Japonica Group]
Length = 1374
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 44 QNNFLKKDQIENSTSEPEQIV---NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKC 100
+++ +KK+Q S E +++ + + AP+ + + E + + +++ EE S K
Sbjct: 784 EDSVVKKNQWCPSADESKRLAKGKSVLTAPINMVFTLPAEFGI--DQADVDEVEEESAKL 841
Query: 101 VKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKM 160
V L ++ V P+ ++ H L I+ + + ++++D+G++VN++ AT K+
Sbjct: 842 V-LSLEQAVFEKPEG---TENRHLKPLYINGYVNGKPMSKMMVDSGAAVNLMPYATFRKL 897
Query: 161 -RLEQDKIK-----------PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQ 208
R +D IK P+E + + +T ++ T F V+ Y+ +LGR
Sbjct: 898 GRNAEDLIKTNMVLKDFGGNPWETKGV-LNVELTVGSKTIPTTFFVIDGKGSYSLLLGRD 956
Query: 209 WIHKMRVVPSTYHQVL 224
IH +PST HQ L
Sbjct: 957 RIHANCCIPSTMHQCL 972
>gi|359479112|ref|XP_003632219.1| PREDICTED: uncharacterized protein LOC100853628 [Vitis vinifera]
Length = 1821
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ V +L+DNGS++N+ AT + P Q + +
Sbjct: 414 HVRPLYITVGCSGRRVPSVLLDNGSALNVCPLATAIALGFAPSDFGPSTQTVRAYDSTKR 473
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 474 EVIGTLMIDLQIGPATFSTLFQVLRIPAFFNLLLGRPWIHVAGAIPSSLHQ 524
>gi|32489468|emb|CAE05822.1| OSJNBa0028M15.14 [Oryza sativa Japonica Group]
Length = 1123
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 22/138 (15%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDG 186
+V+ I N V R+LID GSS+N+L +T++ M + + ++ P +QP F GI + S
Sbjct: 641 IVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPRSELTPTDQP---FHGITSQSSS 697
Query: 187 SLL-------------------TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
L F V + YNAI GR + K +QV
Sbjct: 698 KPLGKITLRVTFGQANNFRTEQITFDVAEFDIAYNAISGRTALVKFMATSHYAYQVFKMP 757
Query: 228 TIYGIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 758 GPKGTITIQGNAKLAVQC 775
>gi|108708231|gb|ABF96026.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1977
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C HN H DCR +K E + + + E K P + +++ + + +
Sbjct: 447 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRREAKQKAPAED 506
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V R++ KRE+ A + + ++ S
Sbjct: 507 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEAMRRARWS 562
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 563 EVA-----LTFDQTDHPPCIARGGQVAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 617
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 618 IKASGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGCANFRTERVNFDVADLSLPYNAV 676
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 677 LGRPALVKFMAAVHYVYLQM 696
>gi|37991888|gb|AAR06334.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1782
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D ++VN++ AT K+ + + L F G +
Sbjct: 923 HLKPLYINGYVNGKPMSKMMVDGRAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 982
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 983 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 1035
>gi|34015355|gb|AAQ56544.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1378
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N ++LID SS+N+L T++ M + + ++ P +QP G +
Sbjct: 587 IVVEPTIRNIKAAQVLIDGSSSINLLIANTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 646
Query: 180 -----IVTYSDG-SLLTD---FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ + LT+ F V + + YNAI+GR + K +QVL +
Sbjct: 647 GKITLPVTFGQANNFLTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYTYQVLKMPGLK 706
Query: 231 GIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 707 GTITIQGNAMLAVQC 721
>gi|50582731|gb|AAT78801.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 799
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K++ E+ + K K D +Q KKD +++ +
Sbjct: 611 CPHHPNSNHVAKDCFVYKQFAEQYV-----KNARKPSDG---DQGISKKKDDEDDAPTGF 662
Query: 59 --EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 663 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPNTPQYLRW---SEIA-----I 710
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + +K
Sbjct: 711 KFDRSDHPDRVVHPGQYPLVLDPVVRNVKLRRTLIDGGSTLNILFAKTLDDMQIPRTGLK 770
Query: 169 PFEQPLIG 176
P P G
Sbjct: 771 PSNAPFHG 778
>gi|77556975|gb|ABA99771.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1770
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + +T+E
Sbjct: 447 CTVHNTPLHDLTDCRAVKSLAERTRKWEEEKRQERREGKTPAAPAGNRRGEAKQKATAED 506
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 507 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 562
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NIL A +
Sbjct: 563 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDA 617
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 618 IKAPGMVLRP-SQPIIGVTPGHTWPLGHINLPVTFGGSANFRTERVDFDVADLSLPYNAV 676
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LG + K M V Y Q+
Sbjct: 677 LGNPALVKFMAAVHYAYLQM 696
>gi|77554883|gb|ABA97679.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 890
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 49/244 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENST-- 57
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 711
Query: 58 -SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A V+ D + + +
Sbjct: 712 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPHYLRWSEIAI 759
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 760 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 819
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGRQWIHK 212
P P G G+ G + F V + Y+AILGR + K
Sbjct: 820 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAK 879
Query: 213 MRVV 216
V+
Sbjct: 880 FMVM 883
>gi|108708549|gb|ABF96344.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1841
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPSGNRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ H ++ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDQGFQEPGATIATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|62734631|gb|AAX96740.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549145|gb|ABA91942.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1372
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 103/274 (37%), Gaps = 51/274 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELIS--KGQLKEFV-KVEDKQPQNQNNFLKKDQIENST 57
C H RH DC KK +E+ ++ KG+ V K + PQ E+ T
Sbjct: 419 CPIHKIDRHSLEDCLVFKKSLEKHMAFEKGKRVRVVEKDAEVAPQ-----------ESDT 467
Query: 58 SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEE-----FSKKCVKLD-VQSEVSF 111
+ P+ ++ H+ Y KRE + E + K+ + ++ F
Sbjct: 468 AYPDSNLHV--------SHIFGGSTAYSSKREYKKVEREVCSTWQGAAHKMKWSEQKIEF 519
Query: 112 LPQDL-KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPF 170
+D K P +V+ I N V +LID GSS+N+L + ++ M + + ++ P
Sbjct: 520 SEEDHPKTAVIPGRYPIVVEPTIRNIKVAWVLIDGGSSINLLFASALDAMGISRSELTPT 579
Query: 171 EQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWIH 211
+Q F GI S L F V + + YNAI+GR +
Sbjct: 580 DQ---SFHGITPQSSSKPLGKITLPVTFGQANNFRMEQITFDVAEFDTAYNAIIGRTALA 636
Query: 212 KMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
K +QVL G I G+ C
Sbjct: 637 KFMATSHYAYQVLKMPGPKGTITIQGNTKLAVQC 670
>gi|108709592|gb|ABF97387.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1618
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D ++VN++ AT K+ + + L F G +
Sbjct: 746 HLKPLYINGYVNGKPMSKMMVDGRAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFGGNPS 805
Query: 183 YSDG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G ++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 806 ETKGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 858
>gi|37991909|gb|AAR06355.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1809
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPSGNRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ H ++ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDQGFQEPGATIATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + DF V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVDFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|116308912|emb|CAH66043.1| OSIGBa0107A02.4 [Oryza sativa Indica Group]
Length = 1506
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-- 180
H L I+ + + ++++D+G++VN++ AT K+ + + L FSG
Sbjct: 844 HLKPLYINDYVNGKPMSKMMVDSGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDFSGNPS 903
Query: 181 ---------VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
VT ++ T F V+ Y+ +LGR IH +PST HQ L
Sbjct: 904 ETKGVLNVEVTVGSKTIPTTFFVIDGKGSYSLLLGRDRIHANCCIPSTMHQCL 956
>gi|77550740|gb|ABA93537.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1405
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I+ + + ++++D G +VN++ AT K + + L F G +
Sbjct: 791 HLKPLYINGYVNGKPMSKMMVDGGVTVNLMPYATFRKFGRNAEDLIKTNMVLKNFGGNPS 850
Query: 183 YSDGSL-----------LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ G+L T F V+ Y+ +LGR WIH +P T HQ L
Sbjct: 851 ETKGALNVELTVGSKTIPTMFFVIDGKGSYSLLLGRDWIHANCCIPLTMHQCL 903
>gi|108708813|gb|ABF96608.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 828
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C H + H +DC K+++E+ K K D +Q KKD +++ +
Sbjct: 522 CPHHPNSNHVAKDCFVYKQFVEQYA-----KNTRKPSDG---DQGTSKKKDDEDDAPTGF 573
Query: 59 -EPEQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+ + +N I PL Y KR+ +K + ++ + PQ L
Sbjct: 574 QDSRKELNHIFGGPL-----------AYESKRK--------QKLTEWEINAVQPNTPQYL 614
Query: 117 KLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG 176
+ P + LV+ + N +RR LID G+++NIL T++ +++ + +++P P G
Sbjct: 615 RC-GPPGEVPLVLDPVVRNVKLRRTLIDGGNALNILFAKTLDNIQIPRTELQPSNAPFHG 673
Query: 177 -FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTY 220
G+ G + F V + Y+AILGR + K VP
Sbjct: 674 VIPGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMAVPHYT 733
Query: 221 HQVL 224
+ ++
Sbjct: 734 YMMM 737
>gi|147838338|emb|CAN69864.1| hypothetical protein VITISV_032438 [Vitis vinifera]
Length = 387
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F +DL + PH+D L+++++I V+RIL+D SS NIL M E +++
Sbjct: 157 IKFTSKDLYDVSLPHEDPLIVTLQIEKYQVQRILVDTRSSSNILFHHCFRSMYREHEELC 216
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD 191
+ L+GF+ T++ L+ +
Sbjct: 217 LSQTLLVGFNRKTTHAVRQLMLE 239
>gi|110288531|gb|ABB46607.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 537
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG------- 179
+V+ I N V +L+D GSS+N+L +T++ M + + ++ P +QP G +
Sbjct: 343 IVVEPTIRNIKVALVLVDGGSSINLLFASTLDAMGIPRSELTPTDQPFHGITPQSSSKPL 402
Query: 180 -----IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
VT+ S F V + + YNAI+GR + K ++VL
Sbjct: 403 GKITLPVTFGQASNFRTKQITFHVAEFDTAYNAIIGRTALVKFMAASHYAYEVLKMPGPK 462
Query: 231 GIEEIGGDQATTRTC 245
G I G+ C
Sbjct: 463 GTITIQGNAKLAVQC 477
>gi|108864304|gb|ABA93149.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1490
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 97/258 (37%), Gaps = 52/258 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D D +
Sbjct: 567 CPHHPNSNHAAKDCFVYKQFAEQYA-----KNTRKASDGDQSTSKKKDDDDDAPTGFQDH 621
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A V+ D + + +K
Sbjct: 622 RKELNRIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETTIKFD 669
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP-- 169
+ H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 670 RLDHPDRVVHPGRYPLVLDQVVRNVKLRRSLIDGGSALNILFVKTLDDMQIARTELKPKN 729
Query: 170 --FEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
FE +TDF + Y+AILGR + K VP + ++
Sbjct: 730 ICFE-----------------VTDF-----ETAYHAILGRPVLAKFMAVPHYTYMMMKMP 767
Query: 228 TIYGIEEIGGDQATTRTC 245
G+ + D TC
Sbjct: 768 GPRGVISLRSDIKQAVTC 785
>gi|147775389|emb|CAN62720.1| hypothetical protein VITISV_028838 [Vitis vinifera]
Length = 472
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 129 ISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSL 188
I + C V +L+DNG ++N+ T + P Q + + G G+L
Sbjct: 142 IDVACSGCRVPSVLLDNGFALNVCPLVTAIALGFSPSDFGPSIQTVRAYDGTQRTVMGTL 201
Query: 189 LTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
F V++ S +N +LGR WIH+ +PS HQ
Sbjct: 202 TAHVMIGPVRYSVLFQVLRIRSSFNLLLGRPWIHEAGAIPSYLHQ 246
>gi|55168013|gb|AAV43881.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1551
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 56/261 (21%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K+++E+ + K D +Q+ KKD +++
Sbjct: 643 CPHHPNSNHAAKDCFVYKQFVEQYAKNAR-----KTSDG---DQSTSKKKDDEDDT---- 690
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
P + H + +++ + E+ + +K + ++ + PQ L+ +
Sbjct: 691 ---------PTGFQDHCKELNHIFGEPLAYESKRK--QKLTEREINAVQPDTPQYLRCTR 739
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FSG 179
+RR LID GS++NIL T++ M++ + ++KP P G G
Sbjct: 740 -----------------LRRSLIDGGSALNILFAKTLDDMQIPRTELKPSNSPFHGVIPG 782
Query: 180 I-----------VTYSDGSLLTD----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ VT+ G F V + Y+AILGR + K VP + ++
Sbjct: 783 LSATPLGQITLPVTFGTGENFRTENVCFEVADFETVYHAILGRPALAKFMAVPHYTYMMM 842
Query: 225 CYQTIYGIEEIGGDQATTRTC 245
G+ + D TC
Sbjct: 843 KMPGPRGVISLWSDIKQAVTC 863
>gi|38347153|emb|CAD39484.2| OSJNBa0039G19.13 [Oryza sativa Japonica Group]
Length = 714
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 47/247 (19%)
Query: 4 HNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS---EP 60
H + H +DC K++ E+ + + + +Q+ KKD +++ + +P
Sbjct: 440 HPNSNHAAKDCFIYKQFAEQYANNTRKPTY--------GDQSTSKKKDDEDDAPTGFQDP 491
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQD-LKL 118
+ +N I PL E +R +REI A + + + ++ ++ + F D
Sbjct: 492 RKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRWS-ETAIKFDRSDNPDR 546
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ P LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 547 VVHPGRYPLVLDPVVHNVKLRRSLIDGGSTLNILFAKTLDNMQIPRTELKP--------- 597
Query: 179 GIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGD 238
S ++AIL R + K VP H ++ G+ + D
Sbjct: 598 --------------------STFHAILARPALAKFMAVPHYTHMMMKMPGPRGVISLRSD 637
Query: 239 QATTRTC 245
TC
Sbjct: 638 IKQAVTC 644
>gi|19881664|gb|AAM01065.1|AC092748_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1174
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 140 RILIDNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDGSL---------- 188
++++D G++V+++ AT +K+ R +D IK L F G + + G L
Sbjct: 418 KMMVDGGATVHLMQYATFKKLGRNAKDLIKT-NMVLKDFGGNPSENKGVLNVELTIGSKT 476
Query: 189 -LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
T F V+ Y+ +LGR WIH +PST HQ +
Sbjct: 477 VPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCM 513
>gi|46575987|gb|AAT01348.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878388|gb|AAT85163.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1680
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENS-TSE 59
C H + H +DC K++ E+ + + K D +Q KKD +++ T
Sbjct: 524 CPHHPNSNHVAKDCFVYKQFAEQYVKNAR-----KPSDG---DQGTSKKKDDEDDAPTGF 575
Query: 60 PEQI--VNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLK 117
P+ +N I + +R +REI A + + + ++ E++ +K
Sbjct: 576 PDHRKELNYIFGGT---LAYESKRKQKLTEREINAVQPNTPQYLRW---PEIA-----IK 624
Query: 118 LIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+S H D LV+ + N +RR LID S++NIL T + M++ + ++KP
Sbjct: 625 FDRSDHPDRVVHLGRYPLVLDPVVRNVKLRRTLIDGASALNILFAKTPDDMQIPRTELKP 684
Query: 170 FEQP----LIGFSGI--------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKM 213
P + G S VT+ + + T+ F V + Y+AILGR + K
Sbjct: 685 SNAPFHDVIPGLSATPVGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKF 744
Query: 214 RVVPSTYHQVLCYQTIYGIEEIGGDQATTRTC 245
VP + ++ G+ + D TC
Sbjct: 745 MAVPHYTYMMMKMPGPGGVISLRSDIKQAVTC 776
>gi|108862653|gb|ABA98399.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 269
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 108 EVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
E+SF P D + + P D LV+S I C V+ IL+D S +++ D KM L Q +
Sbjct: 70 EISFSPTDAEGVSFPRQDPLVVSASIAGCDVQCILVDGRSLTDVIFDDAYSKMLLAQ-AL 128
Query: 168 KPFEQPLIGFSGIV 181
PL GF+G V
Sbjct: 129 SWAPAPLRGFNGEV 142
>gi|147854500|emb|CAN80708.1| hypothetical protein VITISV_033567 [Vitis vinifera]
Length = 944
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L ISI V IL+DN S++N+ T +
Sbjct: 10 IVFFDDDLPPEGSDHTCPLYISIGYSGYRVPSILLDNSSTLNVCLLTTAIALNYAPSDFG 69
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
P Q + + T V++ + +N +LGR WIH+ V+P + HQ
Sbjct: 70 PSTQTIQAYDS----------TRKEVLRIPTSFNLLLGRSWIHRAGVIPYSLHQ 113
>gi|62733726|gb|AAX95836.1| predicted protein [Oryza sativa Japonica Group]
Length = 1179
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 97/258 (37%), Gaps = 52/258 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D D +
Sbjct: 586 CPHHPNSNHAAKDCFVYKQFAEQYA-----KNTRKASDGDQSTSKKKDDDDDAPTGFQDH 640
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A V+ D + + +K
Sbjct: 641 RKELNRIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETTIKFD 688
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP-- 169
+ H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 689 RLDHPDRVVHPGRYPLVLDQVVRNVKLRRSLIDGGSALNILFVKTLDDMQIARTELKPKN 748
Query: 170 --FEQPLIGFSGIVTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
FE +TDF + Y+AILGR + K VP + ++
Sbjct: 749 ICFE-----------------VTDF-----ETAYHAILGRPVLAKFMAVPHYTYMMMKMP 786
Query: 228 TIYGIEEIGGDQATTRTC 245
G+ + D TC
Sbjct: 787 GPRGVISLRSDIKQAVTC 804
>gi|32488400|emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group]
Length = 1827
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C HN H DCR +K E + + + E K P ++ + + + + +
Sbjct: 475 CIVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSSNRRSEAKQKAPAED 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ E R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGG---ECAHVSRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTEQVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|90399165|emb|CAJ86094.1| H0818H01.16 [Oryza sativa Indica Group]
Length = 1827
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P ++ + + + + +E
Sbjct: 475 CIVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSSNRRSEAKQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ E R++ KRE+ A + + + S
Sbjct: 535 IDDSDDDLGFQEPGATIATVDGG---ECAHVSRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTEQVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|77554749|gb|ABA97545.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1793
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C+ HN H DCR +K E + + + E K P + + + +T+E
Sbjct: 342 CSVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAPAAPAGNRRGEAKQKATAED 401
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P V T+ H ++ R++ KRE+ A + + + S
Sbjct: 402 VDDGDDDLGFQEPGATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRARWS 457
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 458 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 512
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 513 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPITFGGSANFRTERVNFDVADLSLPYNAV 571
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 572 LGRPALVKFMAAVHYAYLQM 591
>gi|116309248|emb|CAH66336.1| OSIGBa0097I24.4 [Oryza sativa Indica Group]
Length = 2027
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C+ HN H DCRT+K E + + + E K P + + + + + +
Sbjct: 475 CSVHNTSLHDLADCRTVKNLAERTRKWEEDRRKERREGKSPATPSGKRRSEAKQKAPAVD 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NI+ A +
Sbjct: 591 EVA-----LTFDQTDHPPCLARGGQIAMVVSPTICNVKLGRVLIDGGAALNIISPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|147802882|emb|CAN59904.1| hypothetical protein VITISV_033144 [Vitis vinifera]
Length = 227
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 192 FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQT 228
F +V+ S +N I+ R W+H M+V+PSTYHQ++ Y T
Sbjct: 89 FSIVEDLSHFNTIMERTWLHNMKVIPSTYHQMVSYLT 125
>gi|110288794|gb|AAP52640.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 808
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 49/235 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQP-QNQNNFLKKDQIENST-- 57
C H + H +DC K++ E+ + K K + Q+ KKD +
Sbjct: 577 CPHHPNSNHVAKDCFVYKQFAEQ---------YTKTTRKNSDEEQSTSRKKDDGDTPAGF 627
Query: 58 -SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDL 116
+++ + PL E +R +REI A + + + ++ SE++ +
Sbjct: 628 QDHRKELNHIFGGPLAYE----SKRKQKLTEREINAVQPDTPQYLRW---SEIA-----I 675
Query: 117 KLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
K +S H D LV+ + N +RR LID GS++NIL T++ M++ + ++K
Sbjct: 676 KFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELK 735
Query: 169 PFEQPLIG-FSGIVTYSDGSLL---------------TDFLVVKATSPYNAILGR 207
P P G G+ G + F V + Y+AILGR
Sbjct: 736 PSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENISFEVADFETAYHAILGR 790
>gi|22539075|gb|AAN01247.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431333|gb|AAP53128.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 362 CIVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 421
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P I+ T+ V R++ KRE+ A + + + S
Sbjct: 422 IDDGDDDLGFQEPGAIIATLDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 477
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ + Q+ H A+V+S + N + R+LID G++VNIL A +
Sbjct: 478 EVALI-----FDQTDHPPCVAQGGQIAMVVSPTVCNVKLGRVLIDGGAAVNILSPAAFDA 532
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 533 IKAPGMVLRP-SQPIIGVTPGHTWLLGHIDLPVTFGGSANFRMERVNFDVADLSLPYNAV 591
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 592 LGRPALVKFMAAVHYAYLQM 611
>gi|147770279|emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]
Length = 1734
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 138 VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTD------ 191
V +L+DNGS++++ + D P Q + + G G+L T
Sbjct: 342 VPSVLLDNGSALSVCPLVIAIALGFSPDDFGPSTQTVRAYDGTQRTVMGTLSTHVMIGLV 401
Query: 192 -----FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
F V++ S +N +LGR WIH+ +PS+ HQ
Sbjct: 402 SYSIVFQVLRIQSSFNLLLGRPWIHEAGAIPSSLHQ 437
>gi|77548466|gb|ABA91263.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2030
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C HN H DCR +K E + + + E K P + + + + + +
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V+ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHVY---RRSLKAMKRELLAAAP-THEATRQARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|284434495|gb|ADB85262.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 457
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 59 EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIE--APEEFSKKCVKLDVQSEVSFLPQDL 116
EP+ VN I R++ K+E+ P K LD + +SF +D
Sbjct: 99 EPQHTVNMIFGGTS---SYESRRHLKAVKQEVNLVEPPTIIKPSRWLD--TIISFSKEDC 153
Query: 117 KLIQS-PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLI 175
+ + P +++ I NC V R+LID GSS+NIL +E+M++ + K+KP +
Sbjct: 154 SIPSTRPSRFPIIVEPTINNCSVNRVLIDGGSSLNILFAGALEEMQVPKAKVKPVKYAFH 213
Query: 176 G 176
G
Sbjct: 214 G 214
>gi|147828273|emb|CAN77717.1| hypothetical protein VITISV_004666 [Vitis vinifera]
Length = 716
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 41/222 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
CA+H H T C L+ I++LI++G + Q +++ + ++ +P
Sbjct: 202 CAYHQGLGHETDRCTALRHAIQDLINQGLVH----------LGQPSYVIR-EVRTVWQQP 250
Query: 61 EQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQ 120
+A PL+ M+ V + EI C+ F DL
Sbjct: 251 P------IAARPLK-GMSSNEGVRREDDEI-----LRATCIV--------FSDDDLPPKG 290
Query: 121 SPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI 180
S H L IS+ V +L+ NG ++N+ AT P Q + +
Sbjct: 291 SDHACPLYISVGCSGRRVPSVLLGNGLALNVCHLATAITFGYAPSDFGPSTQTVRAYDS- 349
Query: 181 VTYSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
T+ + V++ + ++ +LGR WIHK R +P +++Q
Sbjct: 350 -TWRE--------VLRIPTSFSLLLGRPWIHKARPIPFSFYQ 382
>gi|147807253|emb|CAN66315.1| hypothetical protein VITISV_035172 [Vitis vinifera]
Length = 1120
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 135 NCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSDGSLLTDFLV 194
C V +L+DNGS++N+ AT + P + + + T V
Sbjct: 6 GCRVPFVLLDNGSALNVCPLATTIALSFAHSDFGPSTETVRAYDS----------TKREV 55
Query: 195 VKATSPYNAILGRQWIHKMRVVPSTYHQ 222
++ + +N +LGR WIH++ +PS+ HQ
Sbjct: 56 LRIPTSFNLLLGRPWIHRVGAIPSSLHQ 83
>gi|4115365|gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1329
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 189 LTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYG 231
+ +F V + YN ILG W+++M+VVPSTYHQ + + T G
Sbjct: 368 MVEFTVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVG 410
>gi|53749265|gb|AAU90124.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1796
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
A+V+S + N + R+LID G+++NIL A + ++ ++P QP+IG + T+
Sbjct: 623 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 681
Query: 186 GSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVVPSTYHQV 223
G + DF V + PYNA+LGR + K M V Y Q+
Sbjct: 682 GHIDLPVTFGGSANFRTERVDFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQM 735
>gi|22748431|gb|AAN05396.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1030
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 42/242 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D D +
Sbjct: 5 CPHHPNSNHAAKDCFVYKQFAEQ-----NTKNARKASDGDQSMSKKKDDDDDAPIGFRDR 59
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A V+ D + + +K
Sbjct: 60 RKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETTIKFY 107
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 108 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSN 167
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+ ILGR + K
Sbjct: 168 APFHGVIPGLSATPLGQITLRVTFGTRENFRTENVCFKVADFDTAYHDILGRPALAKFMA 227
Query: 216 VP 217
VP
Sbjct: 228 VP 229
>gi|38567773|emb|CAE76060.1| B1248C03.19 [Oryza sativa Japonica Group]
gi|38567781|emb|CAE76067.1| B1340F09.5 [Oryza sativa Japonica Group]
Length = 1958
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C HN H DCR +K E + + + E K P + + + + + +
Sbjct: 437 CTIHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRGEAKQKAPADD 496
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V R++ KRE+ A + + + + S
Sbjct: 497 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRALWS 552
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 553 EVA-----LTFDQTDHPPCVARGGQVAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 607
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 608 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 666
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 667 LGRPALVKFMAAVHYAYLQM 686
>gi|147858072|emb|CAN81817.1| hypothetical protein VITISV_042654 [Vitis vinifera]
Length = 545
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 141 ILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPL----------IGFSGI-VTYSDGSLL 189
+L+DNGS +N+ A + P Q + +G GI + + +
Sbjct: 89 VLLDNGSVLNVCHLAIAIALGYAPFDFGPSTQTVRTYDSTRREVMGILGIELLIGPATFV 148
Query: 190 TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
T F V++ + +N +LGR WIH+ V+PS+ HQ
Sbjct: 149 TVFQVLRIPTSFNLLLGRPWIHRAGVIPSSLHQ 181
>gi|32488015|emb|CAE02878.1| OSJNBb0022F23.15 [Oryza sativa Japonica Group]
Length = 1612
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
A+V+S + N + R+LID G+++NIL A + ++ ++P QP+IG + T+
Sbjct: 579 AMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 637
Query: 186 GSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVVPSTYHQV 223
G + +F V + PYNA+LGR + K M V TY Q+
Sbjct: 638 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMTAVHYTYLQM 691
>gi|77553737|gb|ABA96533.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 770
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 96/254 (37%), Gaps = 53/254 (20%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVE-DKQPQNQNNFLKKDQIENSTSE 59
C H RH DC KK + + ++ + K VE D + Q E+ ++
Sbjct: 459 CPIHKSDRHSLEDCLVFKKSLAKHMALEKGKRVRVVEKDAEAATQ---------ESDSAY 509
Query: 60 PEQIVNTIMAPLPLEV-HMTKERNVYCKKREIEAPEEFSKKCVKLD-VQSEVSFLPQDLK 117
P+ L V H+ Y KRE + E + C ++ + Q ++
Sbjct: 510 PD---------FDLHVSHIFGGSTAYSSKREYKKVER--EVCSTWQGAAPKMKWSEQKIE 558
Query: 118 LIQSPHDDALVI--------SIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKP 169
+ H +I I N V R++ID GSS+N+L +T++ M + + K+ P
Sbjct: 559 FSEEDHPKTAIILGRYPIVAEPTIRNIKVARVVIDGGSSINLLFASTLDVMGIPRSKLTP 618
Query: 170 FEQPLIGFSGIVTYSDGSLL-------------------TDFLVVKATSPYNAILGRQWI 210
+QP F GI S L F V + + YN I+GR +
Sbjct: 619 TDQP---FHGITPQSSSKPLGKITLPVTFGQANNFRTEQITFGVAEFDTEYNTIIGRTAL 675
Query: 211 HKMRVVPSTYHQVL 224
K +QVL
Sbjct: 676 AKFMAASYYAYQVL 689
>gi|38346981|emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa Japonica Group]
Length = 2001
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C+ HN H DCRT+K E + + + E K P + + + + + +
Sbjct: 475 CSVHNTSLHDLADCRTVKNLAERTRKWEEDRRKERREGKSPATPSGKRRSEAKQKAPAVD 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NI+ A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLIDGGAALNIISPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMVLQP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|108862980|gb|ABA99910.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1757
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + K + E K P + + + + +E
Sbjct: 474 CTVHNTSLHDLADCRAVKSLAERTRKWEEEKRQERREGKAPATPAGNRRGEAKQKAPAED 533
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
PE V T+ H ++ R++ KRE+ A + + + S
Sbjct: 534 IDDGDDDLGFQEPEATVATVDGGAC--AHASR-RSLKAMKRELLAAAP-THEATRRAWWS 589
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+L+D G+++NIL A +
Sbjct: 590 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLVDGGAALNILSPAAFDA 644
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG T+ G + DF V + PYNA+
Sbjct: 645 IKAPGMVLRP-SQPIIGVMPGHTWPLGHIDLPVTFGGPANFRTERVDFDVADLSLPYNAV 703
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 704 LGRPALVKFMAAVHYAYLQM 723
>gi|147785744|emb|CAN64253.1| hypothetical protein VITISV_015107 [Vitis vinifera]
Length = 341
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 202 NAILGRQWIHKMRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCASN 248
+ I+G WIHK++V+PSTYHQ++ Y T G + Q TR N
Sbjct: 274 SVIMGHAWIHKIKVIPSTYHQMVSYLTEKGQVNLLSSQLATRNAIRN 320
>gi|77553021|gb|ABA95817.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1339
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 53/286 (18%)
Query: 4 HNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE---- 59
H + H +DC K++ E+ K K D +Q KKD +++ ++
Sbjct: 395 HPNSNHAAKDCFVYKQFAEQYA-----KNACKTTDG---DQGTSKKKDDEDDAPTDFQDH 446
Query: 60 PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+++ + PL E +R +REI A V+ + + + +K
Sbjct: 447 RKELNHIFGGPLAYE----SKRKQKLIEREINA--------VQPNTPQYLQWSETTIKFD 494
Query: 120 QSPHDDALVISIKIGNCL--------VRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D +V + L +RR LID G+++NIL T++ M++ + ++KP
Sbjct: 495 RSDHPDRVVHPGRYPQVLHPMDRNVKLRRSLIDGGNALNILFTKTLDDMQIPRTELKPSN 554
Query: 172 QP----LIGFSGI--------VTY-SDGSLLTD---FLVVKATSPYNAILGRQWIHKMRV 215
P ++G S VT+ + + T+ F V + Y AILGR + K
Sbjct: 555 APFHGVILGLSATPLGQITLPVTFGTRENFRTENICFEVADFETAYYAILGRPALAKFMA 614
Query: 216 VPSTYHQVLCYQTIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
VP + ++ G+ + D TC K++ E+ TR
Sbjct: 615 VPHYTYMMMKMPGPRGVISLWSDIKQAVTC-----DKESCEMAQTR 655
>gi|147771514|emb|CAN71542.1| hypothetical protein VITISV_029029 [Vitis vinifera]
Length = 481
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L ISI V +L+DNGS +N+ A + P Q + +
Sbjct: 206 HTCPLYISIDCLGLQVPYVLLDNGSVLNVCPLAIAIALGYAPSDFGPSTQTVRAYDS--- 262
Query: 183 YSDGSLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
T V++ + +N +LGR WIH+ RV+PS HQ
Sbjct: 263 -------TQRKVLRIPTSFNLLLGRPWIHRARVIPSFLHQ 295
>gi|242036341|ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
gi|241919419|gb|EER92563.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
Length = 1072
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQ------------PL 174
L++ I R+L+D GSS++IL ++ +++ ++KP++ PL
Sbjct: 866 LILDPCINGVRFERVLVDGGSSIDILFRNSLPALKISPAQLKPYDAQFWGVLPSQSSVPL 925
Query: 175 IGFSGIVTYSDG----SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIY 230
+ V + + +F+V Y+AILGR + K VP + VL T
Sbjct: 926 GQITLPVQFGTPDHFRTEFVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKIPTEK 985
Query: 231 GIEEIGGDQATTRTC 245
G+ + G+ T TC
Sbjct: 986 GVLTVRGNVYTAYTC 1000
>gi|147767184|emb|CAN66963.1| hypothetical protein VITISV_013142 [Vitis vinifera]
Length = 1087
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H L I++ + V +L+DNGS +NI AT + P Q + +
Sbjct: 590 HVRPLYITVGCSSRRVPSVLLDNGSPLNICLLATAIALGFAPSDFGPSTQIVRAYDSTKR 649
Query: 183 YSDGSLLTD-----------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQ 222
G+L+ D F V++ + +N +LGR WIH +PS+ HQ
Sbjct: 650 EVMGTLMIDLQIGPATFSTLFQVLRIPTSFNLLLGRPWIHIAGAIPSSLHQ 700
>gi|38346434|emb|CAD40221.2| OSJNBa0019J05.19 [Oryza sativa Japonica Group]
Length = 1969
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGRRRSEARQKAPAED 534
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S I N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVAWGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|110288778|gb|AAP52608.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1008
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 42/242 (17%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSEP 60
C H + H +DC K++ E+ K K D D +
Sbjct: 5 CPHHPNSNHAAKDCFVYKQFAEQ-----NTKNARKASDGDQSMSKKKDDDDDAPIGFRDR 59
Query: 61 EQIVNTIMA-PLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLI 119
+ +N I PL E +R +REI A V+ D + + +K
Sbjct: 60 RKELNHIFGGPLAYE----SKRKQKLTEREINA--------VQPDTPQYLRWSETTIKFY 107
Query: 120 QSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFE 171
+S H D LV+ + N +RR LID GS++NIL T++ M++ + ++KP
Sbjct: 108 RSDHPDRVVHPGRYPLVLDPVVRNVKLRRSLIDGGSALNILFAKTLDDMQIPRTELKPSN 167
Query: 172 QPLIG-FSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRV 215
P G G+ G + F V + Y+ ILGR + K
Sbjct: 168 APFHGVIPGLSATPLGQITLRVTFGTRENFRTENVCFKVADFDTAYHDILGRPALAKFMA 227
Query: 216 VP 217
VP
Sbjct: 228 VP 229
>gi|38344350|emb|CAD40172.2| OSJNBa0061A09.11 [Oryza sativa Japonica Group]
Length = 2030
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTS-- 58
C HN H DCR +K E + + + E K P + + + + + +
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 534
Query: 59 -----------EPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ V R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSIKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A V+
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAVDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PY+A+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYSAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|16924036|gb|AAL31648.1|AC079179_3 Putative polyprotein [Oryza sativa]
gi|17047042|gb|AAL34947.1|AC079037_20 Putative polyprotein [Oryza sativa]
gi|31429902|gb|AAP51891.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1210
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E+ + + + E K P + + + + + +E
Sbjct: 353 CTVHNTSLHDLADCRAVKSLAEQTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 412
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 413 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 468
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 469 EVA-----LTFDQTDHPPCVARGGQVAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 523
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 524 IKAPGMVLRP-SQPIIGVTPGHTWPLGHINLPVTFGGSANFRTERVNFDVADLSLPYNAV 582
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 583 LGRPTLVKFMAAVHYAYLQM 602
>gi|38344341|emb|CAD40163.2| OSJNBa0061A09.2 [Oryza sativa Japonica Group]
gi|38346853|emb|CAD39935.2| OSJNBa0091C12.13 [Oryza sativa Japonica Group]
Length = 637
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 93 PEEFSKKCVKLDVQSEVSFLPQDLKLIQSP--------------HDDALVISIKIGNCLV 138
P EF K +D E + +LI SP H L ++ + +
Sbjct: 54 PAEFGIKQADVDEIEE-----ESARLILSPEQAVFEKLEGTENRHLKPLYVNGYVNGKPM 108
Query: 139 RRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGI-----------VTYSDGS 187
++++D G++VN++ AT K+ + + L + G +T S +
Sbjct: 109 SKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMVLKDYGGNPSETKGVLNVELTVSSKT 168
Query: 188 LLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
+ T F V+ Y+ +LGR WI +PST HQ L
Sbjct: 169 IPTTFFVIDGKGSYSLLLGRDWIDANCCIPSTMHQCL 205
>gi|38346194|emb|CAD39523.2| OSJNBa0027O01.10 [Oryza sativa Japonica Group]
Length = 2020
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 126 ALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYSD 185
A+V+S+ + N + R+LID G+++NIL A + ++ ++P QP+IG + T+
Sbjct: 612 AMVVSLTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRP-SQPIIGVTPGHTWPL 670
Query: 186 GSL---------------LTDFLVVKATSPYNAILGRQWIHK-MRVVPSTYHQV 223
G + +F V + PYNA+LGR + K M V Y Q+
Sbjct: 671 GHIDLPVTFGGSANFRTERVNFDVADLSLPYNAVLGRPALVKFMAAVHYAYLQM 724
>gi|30089739|gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|108708895|gb|ABF96690.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1547
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 122 PHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSG-- 179
P +V+ I N R+LID SS+N+L +T++ M + + ++ P QP G +
Sbjct: 547 PERYPIVVEPTIRNIKFARVLIDGDSSINLLFASTLDAMGIPRSELTPTGQPFHGITPQS 606
Query: 180 ----------IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLC 225
VT+S + F V + + YNAI+GR + + +QVL
Sbjct: 607 SSKPLGKITLRVTFSQANNFRTEQITFDVAEFDTTYNAIIGRTALARFMAASHYAYQVLK 666
Query: 226 YQTIYGIEEIGGD 238
GI I G+
Sbjct: 667 MPGPKGIITIQGN 679
>gi|78707624|gb|ABB46599.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 962
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 138 VRRILIDNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDG---------- 186
+ ++++D G+++N++ AT K+ R +D IK L F G + + G
Sbjct: 1 MSKMMVDGGAALNLMLYATFRKLGRNAEDLIKT-NMVLKDFGGNPSETKGVLNVELTVGG 59
Query: 187 -SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ T F V+ Y+ +LGR W+H +PST HQ L
Sbjct: 60 KTIPTTFFVIDGKGSYSLLLGRDWVHANCCIPSTMHQCL 98
>gi|32492152|emb|CAE04690.1| OSJNBb0015D13.5 [Oryza sativa Japonica Group]
Length = 1814
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQ----NQNNFLKKDQIENS 56
C HN H DCR +K E + + + E K P N+ + KK
Sbjct: 475 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKKKAPAED 534
Query: 57 T---------SEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
EP + T+ H+++ R++ KRE+ A + + + S
Sbjct: 535 IDDGDDDLGFQEPGATIATVDGGAC--AHISR-RSLKAMKRELLAAAP-THEATRRARWS 590
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 591 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 645
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 646 IKAPGMMLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGPANFRTERVNFDVADLSLPYNAV 704
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 705 LGRPALVKFMAAVHYAYLQM 724
>gi|147811596|emb|CAN68278.1| hypothetical protein VITISV_021591 [Vitis vinifera]
Length = 164
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 86 KKREIEAPEEFSKK--CVKLDVQSEVSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILI 143
K RE+ P+ ++ CVK++ + + F+ +D + PHDD L++++++ + V RILI
Sbjct: 2 KHRELTQPKVHAQMIGCVKVNAPT-IEFIVKDPSHVFLPHDDPLMVTLQLRSYEVHRILI 60
Query: 144 DNGSSVNILDDATVEKMRLE 163
D GS NIL + R+E
Sbjct: 61 DTGSLTNILSTRKLTNERVE 80
>gi|31432019|gb|AAP53711.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1725
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 127 LVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIG-FSGIVTYSD 185
LV+ + N +RR LID GS++NIL T++ M++ + ++KP P G G+
Sbjct: 678 LVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSAMPL 737
Query: 186 GSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
G + F V + Y+AILGR + K VP + ++
Sbjct: 738 GQITLPLTFGTRENFRTENICFEVADFETEYHAILGRPALAKFMAVPHYTYMMM 791
>gi|38344134|emb|CAD39844.2| OSJNBb0072N21.13 [Oryza sativa Japonica Group]
gi|38344525|emb|CAE05407.2| OSJNBa0036B17.1 [Oryza sativa Japonica Group]
Length = 1070
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 69/274 (25%), Positives = 108/274 (39%), Gaps = 30/274 (10%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDK--------QPQNQNNFLKKDQ 52
C+ HN RH DCR++K E + K + E K + + N D
Sbjct: 486 CSVHNTYRHSLADCRSVKNLAERFRKADEEKRQGRREGKAAATSTGDRREEAKNKAPADD 545
Query: 53 IENSTSEPEQIVNTIMAPLP-LEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEV-- 109
+S QI +A L T R+ +RE+ A + + V+ SEV
Sbjct: 546 GGDSEDLDFQIPQWTVATLDGGACAHTSLRSFKAMRRELLAAVP-THEAVRKARWSEVKL 604
Query: 110 SFLPQDLK--LIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKI 167
+F D L + ALV+S I N ++R+L+D +S++I+ A + ++ K+
Sbjct: 605 TFDQSDYPTVLARGGGKLALVVSPTIHNVKMKRVLVDGRASLSIISPAAFDALKAPGMKL 664
Query: 168 KPFEQPLIGFSG-----------IVTYSDGSLL----TDFLVVKATSPYNAILGRQWIHK 212
+ P+IG + VT+ D + DF V PYNA+LGR + K
Sbjct: 665 QS-SLPIIGVTPGHTWPLGHVELPVTFGDSTNFRTERIDFDVADFNLPYNAVLGRPALVK 723
Query: 213 MRVVPSTYHQVLCYQTIYGIEEIGGDQATTRTCA 246
+ + G I GD TCA
Sbjct: 724 FMAATHYAYLQMKMPGPAGPITIFGDVKVALTCA 757
>gi|147796488|emb|CAN74805.1| hypothetical protein VITISV_007812 [Vitis vinifera]
Length = 1143
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL L S H L IS+ V L+DNG ++N+ ATV +
Sbjct: 184 IVFSTDDLPLZGSBHTRHLYISVVCXGHRVSFXLLDNGFALNVCPLATVIVIGFAPSDFG 243
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFL-----------VVKATSPYNAILGRQWIHKMRVVP 217
P + + + +L DFL V++ + +N +LG+ WIH+ +P
Sbjct: 244 PXIKIVRAYESTQRKVMXTLTIDFLIGPTIFSILIXVLRVPASFNLLLGQPWIHQAGAIP 303
Query: 218 STYHQ 222
++HQ
Sbjct: 304 FSFHQ 308
>gi|19881715|gb|AAM01116.1|AC098682_20 Putative retroelement [Oryza sativa Japonica Group]
gi|22725940|gb|AAN04950.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431110|gb|AAP52932.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1111
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF +D + + PH D L +S ++ VR ILID GSS +++ T KM L +
Sbjct: 554 ISFGLEDTEGVLFPHQDMLFVSAEMAGFEVRCILIDGGSSADVMFAGTYAKMGLPTLALS 613
Query: 169 PFEQPLIGFSGIVTYSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKM 213
L GF G G L F +V YNAI R + K
Sbjct: 614 QAPTSLRGFGGEAVQVLGQALIKVAFGSQENRREEEILFDIVDIPYNYNAIFCRGTLTKF 673
Query: 214 RVVPSTYHQVL 224
V ++H L
Sbjct: 674 EAV--SHHNYL 682
>gi|147843505|emb|CAN82058.1| hypothetical protein VITISV_010874 [Vitis vinifera]
Length = 326
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 119 IQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFS 178
+ PH+DALV+++ I VRR+LID GSS ++L + ++M ++ + L F+
Sbjct: 18 VLQPHEDALVLTLGISGFDVRRVLIDPGSSTDLLQMSAYKQMDYLLSALENLGRLLSRFN 77
Query: 179 GIVTYSDGSLLTDFLVVK 196
G S G L F+V +
Sbjct: 78 GATMTSQGKFL-GFMVTQ 94
>gi|32489223|emb|CAE03842.1| OSJNBb0013J13.19 [Oryza sativa Japonica Group]
gi|38346029|emb|CAE01897.2| OSJNBa0059D20.1 [Oryza sativa Japonica Group]
Length = 1557
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 17/191 (8%)
Query: 65 NTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLPQDLKLIQSPHD 124
+ + AP+ + + E + + +++ EE S K V L + V P K ++ H
Sbjct: 661 SVVTAPVNMVFTLPAEFGI--DQADVDEVEEESAKLV-LSPEQAVFEKP---KGTENRHL 714
Query: 125 DALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVTYS 184
L I+ + L+ ++++D G++VN++ A K+ + + L F G + +
Sbjct: 715 KPLYINGYVNGKLMSKMMVDVGAAVNLMPFAMFRKLGRNAEGLIKTNMVLKDFGGNPSET 774
Query: 185 DG-----------SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQTIYGIE 233
G ++ T F V Y+ +L R WIH +PST HQ L IE
Sbjct: 775 KGILNVELTVGSKTIPTTFFVTDGKGSYSLLLRRDWIHANCCIPSTMHQCLIQWQGDKIE 834
Query: 234 EIGGDQATTRT 244
+ D+ T
Sbjct: 835 IVPADRVHVYT 845
>gi|38344443|emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]
Length = 1989
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P + + + + + +E
Sbjct: 469 CIVHNTSLHDLTDCRAVKSLAERTRKWEEERRQERREGKSPAVPSGNRRSEAKQKAPAED 528
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R++ KRE+ A + + + S
Sbjct: 529 IDDGDDDLGFQEPGATIATVDGGACAHV---SRRSLKAMKRELLAAAP-THEATRRARWS 584
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 585 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 639
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 640 IKAPGMVLRP-SQPIIGVTPGHTWPPGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 698
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 699 LGRPALVKFMAAVHYAYLQM 718
>gi|38344685|emb|CAD40251.2| OSJNBb0096E05.7 [Oryza sativa Japonica Group]
Length = 1271
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 138 VRRILIDNGSSVNILDDATVEKM-RLEQDKIKPFEQPLIGFSGIVTYSDG---------- 186
+ ++++D ++VN++ AT K+ R +D IK L F G + + G
Sbjct: 454 MSKMMVDGEAAVNLMPYATFRKLGRNAEDFIKT-NMMLKDFGGNPSETKGVLNVELTVDS 512
Query: 187 -SLLTDFLVVKATSPYNAILGRQWIHKMRVVPSTYHQVL 224
++ T F V+ Y+ +LGR WIH +PST HQ L
Sbjct: 513 KTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 551
>gi|38345513|emb|CAE01797.2| OSJNBa0039K24.16 [Oryza sativa Japonica Group]
Length = 1881
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 1 CAFHNDCRHYTRDCRTLKKYIEELISKGQLKEFVKVEDKQPQNQNNFLKKDQIENSTSE- 59
C HN H DCR +K E + + + E K P ++ + + + + +E
Sbjct: 464 CTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKSPAVPSSNRRSEAKQKAPAED 523
Query: 60 ------------PEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQS 107
P + T+ V R+ KRE+ A + + + S
Sbjct: 524 IDDGDDDLGFQEPRATIATVDGGACAHV---SRRSFKAMKRELLAAAP-THEATRRARWS 579
Query: 108 EVSFLPQDLKLIQSPHDD--------ALVISIKIGNCLVRRILIDNGSSVNILDDATVEK 159
EV+ L Q+ H A+V+S + N + R+LID G+++NIL A +
Sbjct: 580 EVA-----LTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDA 634
Query: 160 MRLEQDKIKPFEQPLIGFSGIVTYSDGSL---------------LTDFLVVKATSPYNAI 204
++ ++P QP+IG + T+ G + +F V + PYNA+
Sbjct: 635 IKAPGMVLRP-SQPIIGVTPGHTWPLGHIDLPVTFGGSANFRTERVNFDVADLSLPYNAV 693
Query: 205 LGRQWIHK-MRVVPSTYHQV 223
LGR + K M V Y Q+
Sbjct: 694 LGRPALVKFMAAVHYAYLQM 713
>gi|347952214|gb|AEP33252.1| pepsin-like aspartate proteases [Posidonia oceanica]
Length = 144
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+SF +L + H+ L ++++ + + L+DNGSS+N+ K+ + + I
Sbjct: 16 ISFSSDELPPTGTNHNQPLFVTVQFKSFRIPLSLVDNGSSLNVCPLRIALKLGFKAEDIT 75
Query: 169 PFEQPLIGFSGIVTYSDGSLL-----------TDFLVVKATSPYNAILGRQWIHKMRVVP 217
E+ + F S G L+ +F +V +N +LGR W+HK +V+P
Sbjct: 76 SAEKGMTSFDNTHQDSLGILVIPLSIDPFVFNVEFYIVNLEPSFNLLLGRPWLHKHQVIP 135
Query: 218 S 218
Sbjct: 136 G 136
>gi|78708484|gb|ABB47459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 361
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 123 HDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIKPFEQPLIGFSGIVT 182
H D ++ + N +RR LID GS +NIL T++ ++ + ++KP P G ++
Sbjct: 154 HKDRKLLDPVVRNVKLRRSLIDGGSGLNILFAKTLDDTQIPRTELKPSSAPFHGVILRLS 213
Query: 183 YSDGSLLTD---------------FLVVKATSPYNAILGRQWIHKMRVVPSTYHQVLCYQ 227
G + F V + Y+AILGR + K VVP + ++
Sbjct: 214 SPLGQITLPVTFGTRENFRTENICFEVADFETAYHAILGRPALAKFMVVPHYTYMMMKMP 273
Query: 228 TIYGIEEIGGDQATTRTCASNGMGKQNRELGSTR 261
G+ + D TC K++ E+ TR
Sbjct: 274 GPRGVISLRSDIKQAVTC-----DKESCEMAQTR 302
>gi|359484844|ref|XP_003633174.1| PREDICTED: uncharacterized protein LOC100855346 [Vitis vinifera]
Length = 1966
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 109 VSFLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVNILDDATVEKMRLEQDKIK 168
+ F DL S H L IS+ V +L+DNGS++N+ AT +
Sbjct: 388 IVFSDDDLPPEGSGHTRPLYISVGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFG 447
Query: 169 PFEQPLIGFSGIVTYSDGSLLTDFLVVKAT-----------SPYNAILGRQWIHKMRVVP 217
P Q + + G+L + L+ AT + +N +LGR IH+ +P
Sbjct: 448 PSTQTVRAYDSTRREVMGTLEIELLIGPATFVAVFQVLRIPTSFNLLLGRPRIHRAGAIP 507
Query: 218 STYHQ 222
S+ HQ
Sbjct: 508 SSLHQ 512
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,146,275,149
Number of Sequences: 23463169
Number of extensions: 169008732
Number of successful extensions: 470325
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 538
Number of HSP's that attempted gapping in prelim test: 467401
Number of HSP's gapped (non-prelim): 2125
length of query: 267
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 127
effective length of database: 9,074,351,707
effective search space: 1152442666789
effective search space used: 1152442666789
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)