BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041134
         (267 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5UPB2|YL038_MIMIV Putative ankyrin repeat protein L38 OS=Acanthamoeba polyphaga
           mimivirus GN=MIMI_L38 PE=4 SV=1
          Length = 189

 Score = 37.0 bits (84), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 95  EFSKKCVKLDVQSEVS-FLPQDLKLIQSPHDDALVISIKIGNCLVRRILIDNGSSVN 150
           E+ ++CVK ++ + +  F+ +D+  +       L+ +IK GNC++ + LID G+  N
Sbjct: 80  EYFRQCVKHNIYNAIDYFVSKDINTVNEYGKTPLITAIKSGNCIMVKKLIDYGADFN 136


>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3
          Length = 18141

 Score = 34.3 bits (77), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 54    ENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLDVQSEVSFLP 113
             + S SEPE IV+ I+A +P E     E++V  +K E +APEE        D + ++  +P
Sbjct: 15091 DKSKSEPETIVSEIVAGVPKEEEAIPEQDVKFRKPERDAPEE-------TDSEIKLRPVP 15143

Query: 114   QDLKLIQSPHDDALV 128
             Q  K  ++P + ALV
Sbjct: 15144 QASK-DENPDEQALV 15157


>sp|Q6FPE6|LONM_CANGA Lon protease homolog, mitochondrial OS=Candida glabrata (strain
           ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
           GN=PIM1 PE=3 SV=1
          Length = 1026

 Score = 33.1 bits (74), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 31/141 (21%)

Query: 2   AFHNDCRHYTRD--CRTLKKYIEELISKGQLKEFVK---VEDKQP------------QNQ 44
           A +   ++Y R+   R LKK+IE++  K  L E VK   +ED +P             NQ
Sbjct: 670 AINALMKYYCRESGVRNLKKHIEKIYRKAAL-EVVKKMSIEDTEPLVSTSEEPQLSQTNQ 728

Query: 45  NNFLKKDQIENSTSEPEQIVNTIMAPLPLEVHMTKERNVYCKKREIEAPEEFSKKCVKLD 104
           N  +     E+ST++ E  VN   A         KE +     +E  + EE +KK VK +
Sbjct: 729 N--ISSSSAEDSTTDLEDSVNPDTA---------KEASKPNNSQEGASVEE-TKKAVKTE 776

Query: 105 VQSEVSFL-PQDLKLIQSPHD 124
            + + S + P+D+K+  +P D
Sbjct: 777 EEEDTSMIVPEDIKVEITPED 797


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.134    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,142,498
Number of Sequences: 539616
Number of extensions: 4135853
Number of successful extensions: 11670
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 11648
Number of HSP's gapped (non-prelim): 38
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)