BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041139
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 296 bits (758), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 163/187 (87%)
Query: 5 GLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNR 64
GLNRGL A+ DDL++A+ AAKELE GGPVDL+ LD+LQGKWRLLYSSAFSSR+LGG+R
Sbjct: 97 GLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGGSR 156
Query: 65 PGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSS 124
PG PTGRL+P+TLGQVFQRID+ SKDFDNIAE+ELG PWP PP+E TATLAHKFEL+G+
Sbjct: 157 PGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLGTC 216
Query: 125 NIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRA 184
IKI FEKTTVKT+GNLSQ+PP ++PR PD+ RP S+ +G+FEVTY+D+ RITRGDR
Sbjct: 217 KIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPGTGDFEVTYVDDTMRITRGDRG 276
Query: 185 ELRVFVI 191
ELRVFVI
Sbjct: 277 ELRVFVI 283
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 38/207 (18%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLS-VGLDRLQGKWRLLYSSAFSSRTL 60
AV RGL A +D + A +E G ++ V LD G WRL Y+SA L
Sbjct: 70 AVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVKLD---GTWRLQYTSAPDVVVL 126
Query: 61 GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPV-----EVTATLA 115
RL +GQVFQ+ + +D + + V W LP + T +
Sbjct: 127 F-----EAASRLPFFQVGQVFQKFE--CRDRSDGGIIRNVVQWSLPSLLEEQEGATLVVT 179
Query: 116 HKFELIGSSNIKIIFEKTTVKTTGNLSQL----PPLELPR-----------------FP- 153
KF+ + S NI + FE+ +V+ QL P LPR P
Sbjct: 180 AKFDKVSSRNIYLQFEEISVRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQIPV 239
Query: 154 DALRPPSDTRSGEFEVTYLDNDTRITR 180
+A P + G + ++YLDN+ + R
Sbjct: 240 NATSPGRRSVGGLYYLSYLDNNMLLGR 266
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 37/188 (19%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
A+ L RG A+ DD + D A+++EAV P + D + GKW L+Y++ S+ L
Sbjct: 81 AIEPLERGATASPDDQLRIDQLARKVEAV-NPTKEPLKSDLVNGKWELIYTT--SASILQ 137
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
+P R L +Q I++ + N+ WP ++ + +
Sbjct: 138 AKKP-----RFLRSITN--YQSINVDTLKVQNMET------WPF-----YNSVTGDIKPL 179
Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRG 181
S + + + K G + P++ P D+ GE E+TY+D + R++RG
Sbjct: 180 NSKKVAVKLQ--VFKILGFI----PIKAP----------DSARGELEITYVDEELRLSRG 223
Query: 182 DRAELRVF 189
D+ L +
Sbjct: 224 DKGNLFIL 231
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 2 AVSGLNRGL-AANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
A+ G+NRG+ +D + + K LE + + LD++ G W+L+YS+ L
Sbjct: 93 ALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYSTI---TVL 149
Query: 61 GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
G R G ++LG + Q+IDI ++ + ++ L ++ + F++
Sbjct: 150 GSKRT--KLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDV---RGLNLLDGEFRIVASFKI 204
Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
S+++I +E +T+K L + + P G FE++YLD D ++ R
Sbjct: 205 SSKSSVEITYESSTIKPD-QLMNIFRKNMDLLLGIFNP-----EGLFEISYLDEDLQVGR 258
Query: 181 GDRAELRVFVI 191
+ VFV+
Sbjct: 259 DGKGN--VFVL 267
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 36/180 (20%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
A+ L RG A+ DD D A+++EAV P + D + GKW L+Y++ S+ L
Sbjct: 72 AIEPLERGATASPDDQLLIDQLARKVEAV-NPTKEPLKSDLINGKWELIYTT--SAAILQ 128
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
+P R L + ++ D + +E WP VT L +
Sbjct: 129 AKKP-----RFL-----RSLTNYQCINMDTLKVQRMET---WPFYN-SVTGDLTP----L 170
Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRG 181
S + + + + L +P ++ P T GE E+TY+D + RI+RG
Sbjct: 171 NSKTVAVKLQVFKI-----LGFIP----------VKAPDGTARGELEITYVDEELRISRG 215
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 50/224 (22%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
++ G +RGL+A+++ + +LE+ + L L GKW L+Y+S L
Sbjct: 110 SLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLL 169
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
R P + + ++ Q ID S N V + P + + KFE+
Sbjct: 170 SRRISP------LVKVDEISQTIDSDSFTVHN------SVRFASPLATTSLSTNAKFEVR 217
Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDAL------------------------- 156
+++ FE+ + G +E+P F + L
Sbjct: 218 SPKRVQVKFEQGVI---GTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVAR 274
Query: 157 ----RP------PSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
+P P D+ TYLD D RI+RGD + V +
Sbjct: 275 TISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLI 318
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 86/221 (38%), Gaps = 45/221 (20%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
A+ G RGL A+++ + +LEA + L L GKW L Y+S L
Sbjct: 102 ALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLL 161
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNI---------------AELELGVPWPL- 105
G+ P + + ++ Q ID + N A+ E+ P +
Sbjct: 162 GSGSLPQL-----VKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQ 216
Query: 106 ----------PPVEVTATLAHKFELIGS----SNIKIIF---EKTTVKTTGNLSQLPPLE 148
P + + L KFEL G + +K IF E +S PPL+
Sbjct: 217 IKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLK 276
Query: 149 LPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVF 189
+P +R +D TYLD++ RI+RGD + + V
Sbjct: 277 IP-----IR--TDNAESWLLTTYLDDELRISRGDGSSIFVL 310
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 81/228 (35%), Gaps = 58/228 (25%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
++ G +RGL+ ++D + +LE+ + L L GKW L Y+S L
Sbjct: 101 SLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLL 160
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
R P + + ++ Q ID S F + P+ A KFE+
Sbjct: 161 SRRIEPL------VKVDEISQTID--SDSFTVQNSVRFAGPFSTTSFSTNA----KFEIR 208
Query: 122 GSSNIKIIFEK----------------------------------TTVKTTGN-----LS 142
++I FE+ T+V+ T + +S
Sbjct: 209 SPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTIS 268
Query: 143 QLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
PPL+ PSD TYLD D RI+RGD + V +
Sbjct: 269 NQPPLKFSL-------PSDNTQSWLLTTYLDKDLRISRGDGGSVYVLI 309
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 80/218 (36%), Gaps = 44/218 (20%)
Query: 5 GLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNR 64
G +RGL A ++ + +LEA + L L KW L+Y+S G
Sbjct: 109 GTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS------FSGLF 162
Query: 65 PGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSS 124
P G L + ++ Q ID S++F ++ P + A KFE+
Sbjct: 163 PLLSRGTLPLARVEEISQTID--SENFTVQNSIQFAGPLATTSISTNA----KFEVRSPK 216
Query: 125 NIKIIFEKTTVKTTGNLSQL----------PPLELPRFPDALRPPSDTRSG--------- 165
++I FE+ + T L ++L F L DT S
Sbjct: 217 RVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQP 276
Query: 166 --EFEV-----------TYLDNDTRITRGDRAELRVFV 190
+F + TYLD D RI+R D + VF+
Sbjct: 277 PLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFI 314
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 58/228 (25%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
++ G NRGL+A+++ + +LE+ + L L GKW L Y+S
Sbjct: 109 SLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS------FS 162
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
G P G L + + ++ Q ID S N V + P + + KFE+
Sbjct: 163 GLFPLLSRGNLPLVRVEEISQTIDSESFTVQN------SVVFAGPLATTSISTNAKFEVR 216
Query: 122 GSSNIKIIFEK----------------------------------TTVKTTG-----NLS 142
++I FE+ T+V+ T ++S
Sbjct: 217 SPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSIS 276
Query: 143 QLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
PP++ P ++ TYLD++ RI+RGD + V +
Sbjct: 277 SQPPIKFPI-------TNNNAQSWLLTTYLDDELRISRGDAGSVFVLI 317
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 64/231 (27%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVG---GPVDLSVGLDRLQGKWRLLYSSAFSSR 58
++ G +RGL+A+++ + +LE+ P D L L GKW L Y+S
Sbjct: 102 SLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTD---ALFLLNGKWILAYTS----- 153
Query: 59 TLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKF 118
G P G + + + ++ Q ID DN +E V + P + + KF
Sbjct: 154 -FVGLFPLLSRGIVPLVKVDEISQTIDS-----DNFT-VENSVLFAGPLATTSISTNAKF 206
Query: 119 ELIGSSNIKIIFEK----------------------------------TTVKTTGN---- 140
E+ ++I FE+ T+V+ T
Sbjct: 207 EIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVAR 266
Query: 141 -LSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
+S PPL+ P D+ TYLD D RI+RGD + V +
Sbjct: 267 TISSQPPLKFSL-------PGDSAQSWLLTTYLDKDIRISRGDGGSVFVLI 310
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 84/228 (36%), Gaps = 58/228 (25%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
++ G NRGL+A+++ + +LE+ + L L GKW L Y+S
Sbjct: 109 SLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS------FS 162
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
G P G L + + ++ Q ID S N V + P + + KFE+
Sbjct: 163 GLFPLLSRGNLPLVRVEEISQTIDSESFTVQN------SVVFAGPLATTSISTNAKFEVR 216
Query: 122 GSSNIKIIFEK----------------------------------TTVKTTG-----NLS 142
++I FE+ T+V+ T ++S
Sbjct: 217 SPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSIS 276
Query: 143 QLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
PP++ P ++ TYLD++ RI RGD + V +
Sbjct: 277 SQPPIKFPI-------TNNNAQSWLLTTYLDDELRIPRGDAGSVFVLI 317
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 130 FEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVT-YLDNDTRITRGD 182
++ G++S PPL+LP P + R+ + +T YLD D RI+RGD
Sbjct: 311 LQQAFASIAGSISGQPPLKLPI-------PGNNRARSWLLTTYLDKDLRISRGD 357
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 58/228 (25%)
Query: 2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
++ G +RGL+A+++ + +LE+ + L L GKW L Y+S + L
Sbjct: 93 SLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLL 152
Query: 62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
G + I + ++ Q ID S +F + P + A KFE+
Sbjct: 153 SR------GIVPLIKVDEISQTID--SDNFTVQNSVRFAGPLGTNSISTNA----KFEIR 200
Query: 122 GSSNIKIIFEK----------------------------------TTVKTTGN-----LS 142
++I FE+ T+V+ T + +S
Sbjct: 201 SPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTIS 260
Query: 143 QLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFV 190
PPL+ P+D TYLD D RI+RGD + V +
Sbjct: 261 SQPPLKFSL-------PADNAQSWLLTTYLDKDIRISRGDGGSVFVLI 301
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 53/194 (27%)
Query: 8 RGLAANTDDLQKADAAAKELEAVGG---PVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNR 64
RG +A+ L ++A K LE + G P D D ++G+WRL++++ R
Sbjct: 88 RGKSASPKQLNDVESAVKVLEGLEGIQNPTDS----DLIEGRWRLMFTT----------R 133
Query: 65 PG--PPTGRLLP-ITLGQVFQ----------RIDILSKDFDNIAELELGVPWPLPPVEVT 111
PG P R + + VFQ R+ + K D I EL+ VE
Sbjct: 134 PGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGELK---------VEAV 184
Query: 112 ATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTY 171
A++ + F++ + P ++P +P R D G + TY
Sbjct: 185 ASIKD------GKRVLFRFDRAAFDL-----KFLPFKVP-YPVPFRLLGDEAKGWLDTTY 232
Query: 172 L--DNDTRITRGDR 183
L + RI+RG++
Sbjct: 233 LSPSGNLRISRGNK 246
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Query: 141 LSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGD 182
LS PPL+LP P + S TYLD D RI+RGD
Sbjct: 326 LSGQPPLKLPF-------PGNRGSSWLLTTYLDKDLRISRGD 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,437,745
Number of Sequences: 539616
Number of extensions: 3175744
Number of successful extensions: 7359
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7339
Number of HSP's gapped (non-prelim): 35
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)