Your job contains 1 sequence.
>041141
MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA
AEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVFS
CTVELAGVSFTGEPAKTKKQAQKNAALAAWSALKKQAKSAFSSSSFSPPSSESGTNDEQD
QAIIARYLATLKGPETNNSQREHRTIGVSASIRREVIPYGDARSLNSLQHQNWHCIPFYP
ELSLYQTCPQERVFRQQENLLALSSLPSSSPRPQIFPFIRSMFQPDHGYYFPSLVEEPVS
LVPEIGPFLYFSNRVMPVPVRNVSQVSIQEIEENPRMEEDWRKGDGGSDCWQNNCPSNVP
RLSQSEIPNSLVSFNSQSEQRMQEGLQGKGEEKSVSSAPNAEISNQLRNQTEQYNWFSPG
FIDARFRPTTISKDGDKFRLQNTVSLDYLQSDSRPRNSTMVSSSGSVGGSVPPSFAAPMT
IRASATASTASLRPQSSNPLVRAPPPRRTAASFCSSRPWPEGMRNQGGMPSRHYMAPAVH
IRSVVPVCSAPPSKKYPDPSREKRTEEQRGDISAT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041141
(575 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2829928 - symbol:DRB3 "dsRNA-binding protein 3... 604 1.8e-71 3
TAIR|locus:2163016 - symbol:DRB5 "dsRNA-binding protein 5... 583 1.5e-66 3
TAIR|locus:2057491 - symbol:DRB2 "dsRNA-binding protein 2... 561 1.8e-62 3
TAIR|locus:2081620 - symbol:DRB4 "double-stranded-RNA-bin... 285 1.6e-24 1
UNIPROTKB|Q0IQN6 - symbol:DRB8 "Double-stranded RNA-bindi... 229 2.6e-16 1
TAIR|locus:2024407 - symbol:HYL1 "HYPONASTIC LEAVES 1" sp... 210 3.6e-14 1
>TAIR|locus:2829928 [details] [associations]
symbol:DRB3 "dsRNA-binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 HOGENOM:HOG000243232
EMBL:BT012284 EMBL:AP000602 EMBL:AK222128 IPI:IPI00525256
RefSeq:NP_001030779.2 RefSeq:NP_189329.3 UniGene:At.37133
ProteinModelPortal:Q9LJF5 SMR:Q9LJF5 STRING:Q9LJF5
EnsemblPlants:AT3G26932.1 EnsemblPlants:AT3G26932.2 GeneID:822310
KEGG:ath:AT3G26932 TAIR:At3g26932 eggNOG:NOG246955
InParanoid:Q2V3S2 OMA:SSVERNC PhylomeDB:Q9LJF5
ProtClustDB:CLSN2680394 Genevestigator:Q9LJF5 Uniprot:Q9LJF5
Length = 359
Score = 604 (217.7 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 113/133 (84%), Positives = 122/133 (91%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
MYKNQLQELAQRSCF+LPSY+C REGPDHAPRFKA+VNFNGE FESPT+CSTLRQAEH+A
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 61 AEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVFS 120
AEVAL LS KGPSK L ARVLDETG+YKNLLQET+HRAGL LPVYT+VRSGPGH P FS
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 121 CTVELAGVSFTGE 133
CTVELAG+SF GE
Sbjct: 121 CTVELAGMSFNGE 133
Score = 123 (48.4 bits), Expect = 7.2e-12, Sum P(3) = 7.2e-12
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
+YKN LQE A R+ +LP Y+ +R GP H P F V G +F + T +QAE A
Sbjct: 87 IYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNGES-AKTKKQAEKNA 145
Query: 61 AEVALDVLSK 70
A A L K
Sbjct: 146 AIAAWFSLRK 155
Score = 108 (43.1 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 535 MAPAVHIRSVVPVCSAPPSKKYPDPS 560
+APAVHIRSV+PVCSAPP K P+P+
Sbjct: 313 LAPAVHIRSVIPVCSAPPPKPNPNPN 338
Score = 42 (19.8 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 177 DEQDQAIIARYLATLKGPETNN---SQREHRTI 206
+E++Q I+AR L+ + E +Q RT+
Sbjct: 165 EEKEQEIVARVLSRFRPKEVKRREPNQSRRRTV 197
>TAIR|locus:2163016 [details] [associations]
symbol:DRB5 "dsRNA-binding protein 5" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010267 "production
of ta-siRNAs involved in RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 HOGENOM:HOG000243232 ProtClustDB:CLSN2680394
EMBL:AB010072 EMBL:AK117808 EMBL:BT009653 IPI:IPI00534111
RefSeq:NP_198923.2 UniGene:At.30254 ProteinModelPortal:Q8GY79
SMR:Q8GY79 IntAct:Q8GY79 STRING:Q8GY79 EnsemblPlants:AT5G41070.1
GeneID:834109 KEGG:ath:AT5G41070 TAIR:At5g41070 eggNOG:NOG295240
InParanoid:Q8GY79 OMA:LRWINLL PhylomeDB:Q8GY79
Genevestigator:Q8GY79 Uniprot:Q8GY79
Length = 393
Score = 583 (210.3 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 109/133 (81%), Positives = 123/133 (92%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKA+VNFNGE FESPT+CSTLRQAEHAA
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60
Query: 61 AEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVFS 120
AEV+L+VLS + PSK L A++LDETG+YKNLLQET+HRAGL LP+YT+VRSG H P FS
Sbjct: 61 AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120
Query: 121 CTVELAGVSFTGE 133
CTVELAG++FTGE
Sbjct: 121 CTVELAGMTFTGE 133
Score = 119 (46.9 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 29/70 (41%), Positives = 36/70 (51%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
+YKN LQE A R+ +LP Y+ +R G H P F V G TF + T +QAE A
Sbjct: 87 IYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFSCTVELAGMTFTGES-AKTKKQAEKNA 145
Query: 61 AEVALDVLSK 70
A A L K
Sbjct: 146 AIAAWSSLKK 155
Score = 79 (32.9 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 527 GGMPSRHY-MAPAVHIRSVVPVCSAPPSKKYPD 558
GG Y +APAV +RSV+PV +APP K P+
Sbjct: 305 GGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPN 337
Score = 45 (20.9 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 373 SFNSQSEQRMQEGLQGKGEEKSVSSAPNAEISNQLRNQTEQ 413
S +SQ E++ QE + E +NQ R +T Q
Sbjct: 158 SLDSQDEEKEQEAVARVLSRFKPKEVRRRETTNQWRRRTSQ 198
>TAIR|locus:2057491 [details] [associations]
symbol:DRB2 "dsRNA-binding protein 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.30.160.20
GO:GO:0003725 EMBL:AC006283 GO:GO:0035196 EMBL:AY034976
EMBL:AY062965 IPI:IPI00547657 PIR:B84684 RefSeq:NP_565672.1
UniGene:At.13732 ProteinModelPortal:Q9SKN2 SMR:Q9SKN2 IntAct:Q9SKN2
STRING:Q9SKN2 PRIDE:Q9SKN2 EnsemblPlants:AT2G28380.1 GeneID:817386
KEGG:ath:AT2G28380 TAIR:At2g28380 eggNOG:NOG291691
HOGENOM:HOG000243232 InParanoid:Q9SKN2 OMA:PCHSMAP PhylomeDB:Q9SKN2
ProtClustDB:CLSN2688512 Genevestigator:Q9SKN2 GO:GO:0070919
Uniprot:Q9SKN2
Length = 434
Score = 561 (202.5 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 106/134 (79%), Positives = 117/134 (87%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKA VNFNGE FESP +CSTLRQAEH+A
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60
Query: 61 AEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVFS 120
AEVAL+ LS +GPS LAAR+LDETGVYKNLLQE + R G LP YTT RSG GH PVF+
Sbjct: 61 AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120
Query: 121 CTVELAGVSFTGEP 134
TVELAG++FTG+P
Sbjct: 121 GTVELAGITFTGDP 134
Score = 68 (29.0 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 533 HYMAPAVHIRSVVPVCSAPPSKKYP 557
H MAP V IR+ VPV SAPP P
Sbjct: 286 HGMAPPVTIRTAVPVFSAPPMPPPP 310
Score = 62 (26.9 bits), Expect = 7.7e-62, Sum P(3) = 7.7e-62
Identities = 30/78 (38%), Positives = 34/78 (43%)
Query: 476 AAPMTIRXXXXXXXXXLRPQSSNPLVRAPPPRRTAASFCSSRPWPEGMRNQGGMPSRHYM 535
A P+TIR P S P + PPP SS P MR P R +
Sbjct: 289 APPVTIRTAV--------PVFSAPPM-PPPPCTNNTQLPSSVYVPSLMRT--APPVR--I 335
Query: 536 APAVHIRSVVPV-CSAPP 552
AP V IR+ VPV SAPP
Sbjct: 336 APPVTIRTAVPVFASAPP 353
Score = 39 (18.8 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 356 PSNVPRLSQSEIPNSLVSFNSQSEQRMQEGLQGKGEEKSVSSAP 399
P N+ L Q I +L+++ R++E + G G S SSAP
Sbjct: 167 PENIDELEQVIIARALINY------RIKENI-GTG---SSSSAP 200
>TAIR|locus:2081620 [details] [associations]
symbol:DRB4 "double-stranded-RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISS;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA;IMP] [GO:0060145 "viral gene silencing in virus
induced gene silencing" evidence=IMP] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0019048 Gene3D:3.30.160.20
EMBL:AL162651 GO:GO:0003725 GO:GO:0010267 GO:GO:0035196
GO:GO:0070919 EMBL:AB455097 EMBL:AY074363 EMBL:AY150509
IPI:IPI00529941 IPI:IPI00914309 PIR:T48069 RefSeq:NP_001154686.1
RefSeq:NP_191839.2 RefSeq:NP_974480.1 UniGene:At.34049
ProteinModelPortal:Q8H1D4 SMR:Q8H1D4 IntAct:Q8H1D4 STRING:Q8H1D4
PaxDb:Q8H1D4 PRIDE:Q8H1D4 EnsemblPlants:AT3G62800.1
EnsemblPlants:AT3G62800.2 GeneID:825455 KEGG:ath:AT3G62800
TAIR:At3g62800 eggNOG:NOG306267 HOGENOM:HOG000072681
InParanoid:Q8H1D4 OMA:YANEREG PhylomeDB:Q8H1D4
ProtClustDB:CLSN2690620 Genevestigator:Q8H1D4 GO:GO:0060145
Uniprot:Q8H1D4
Length = 355
Score = 285 (105.4 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/133 (46%), Positives = 79/133 (59%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFESPTFCSTLRQAEHAA 60
+YK QLQ A + LP Y+ REGP HAPRF+ V F G+TF+S F TL+ AEHAA
Sbjct: 4 VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63
Query: 61 AEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVFS 120
A++A+ L+ + P + A YKNLLQE + + LP Y T SGP H P F+
Sbjct: 64 AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 115
Query: 121 CTVELAGVSFTGE 133
TVE AG F+GE
Sbjct: 116 STVEFAGKVFSGE 128
>UNIPROTKB|Q0IQN6 [details] [associations]
symbol:DRB8 "Double-stranded RNA-binding protein 8"
species:39947 "Oryza sativa Japonica Group" [GO:0003725
"double-stranded RNA binding" evidence=IDA] InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GO:GO:0016075 EMBL:AP008218 GO:GO:0004525 EMBL:AB036988
EMBL:DQ009988 RefSeq:NP_001065960.1 UniGene:Os.3740
EnsemblPlants:LOC_Os12g01916.1 GeneID:4351288
KEGG:dosa:Os12t0109900-02 KEGG:osa:4351288 Gramene:Q0IQN6
HOGENOM:HOG000119022 OMA:TPKPLKV ProtClustDB:CLSN2695502
PANTHER:PTHR11207 Uniprot:Q0IQN6
Length = 424
Score = 229 (85.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 52/133 (39%), Positives = 76/133 (57%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFES-PTFCSTLRQAEHA 59
++K++LQE AQ++ P Y +EGP H P FK+ V N +++S P F + + AE +
Sbjct: 33 VFKSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNR-KAAEQS 91
Query: 60 AAEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGPGHGPVF 119
AAEVAL + K P+ V ETG+ KNLLQE + + +P Y +S G P F
Sbjct: 92 AAEVALMEIVKSIPANANIPAV-QETGLCKNLLQEYAQKMNYAIPSYICTKSASGLAP-F 149
Query: 120 SCTVELAGVSFTG 132
CTVE+ G+ + G
Sbjct: 150 ICTVEIGGIQYIG 162
>TAIR|locus:2024407 [details] [associations]
symbol:HYL1 "HYPONASTIC LEAVES 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035279 "mRNA cleavage involved
in gene silencing by miRNA" evidence=IMP] [GO:0031054 "pre-miRNA
processing" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA;IMP] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0010445 "nuclear dicing body" evidence=IDA] [GO:0051607
"defense response to virus" evidence=RCA] [GO:0010305 "leaf
vascular tissue pattern formation" evidence=IMP] [GO:0010589 "leaf
proximal/distal pattern formation" evidence=IMP] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0009735
GO:GO:0009733 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0035198
GO:GO:0035279 GO:GO:0031054 GO:GO:0010267 GO:GO:0010305
EMBL:AC000132 EMBL:AF276440 EMBL:AY054631 EMBL:AY081525
EMBL:AK319123 IPI:IPI00525041 IPI:IPI00975255 PIR:H86230
RefSeq:NP_563850.1 UniGene:At.10223 PDB:2L2M PDB:2L2N PDB:3ADG
PDB:3ADI PDB:3ADJ PDBsum:2L2M PDBsum:2L2N PDBsum:3ADG PDBsum:3ADI
PDBsum:3ADJ ProteinModelPortal:O04492 SMR:O04492 DIP:DIP-33453N
IntAct:O04492 STRING:O04492 PaxDb:O04492 PRIDE:O04492
EnsemblPlants:AT1G09700.1 GeneID:837498 KEGG:ath:AT1G09700
TAIR:At1g09700 eggNOG:NOG237225 InParanoid:O04492 OMA:CMNGLKE
ProtClustDB:CLSN2916994 EvolutionaryTrace:O04492
Genevestigator:O04492 GO:GO:0010445 GO:GO:0010589 Uniprot:O04492
Length = 419
Score = 210 (79.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 48/134 (35%), Positives = 76/134 (56%)
Query: 1 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKAAVNFNGETFES-PTFCSTLRQAEHA 59
++K++LQE AQ+ P Y ++EGP H F++ V +G + S P F + + AE +
Sbjct: 15 VFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR-KAAEQS 73
Query: 60 AAEVALDVLSKKGPSKVLAARVLDETGVYKNLLQETSHRAGLKLPVYTTVRSGP-GHGPV 118
AAEVAL L+K ++ + ETG+ KNLLQE + + +P+Y + G
Sbjct: 74 AAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQ 133
Query: 119 FSCTVELAGVSFTG 132
F+CTVE+ G+ +TG
Sbjct: 134 FTCTVEIGGIKYTG 147
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 575 501 0.00085 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 616 (65 KB)
Total size of DFA: 303 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.66u 0.08s 42.74t Elapsed: 00:00:03
Total cpu time: 42.66u 0.08s 42.74t Elapsed: 00:00:03
Start: Thu May 9 23:28:41 2013 End: Thu May 9 23:28:44 2013