Query 041144
Match_columns 201
No_of_seqs 142 out of 149
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 06:33:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ehc_A Snoal-like polyketide c 99.8 4.1E-20 1.4E-24 138.6 10.3 81 91-172 41-128 (128)
2 3kkg_A Putative snoal-like pol 99.8 3.1E-20 1E-24 142.2 8.8 84 91-175 54-144 (146)
3 3f9s_A Putative polyketide cyc 99.8 6.9E-19 2.4E-23 134.3 12.4 127 29-174 8-142 (146)
4 2f99_A Aklanonic acid methyl e 99.8 5.9E-19 2E-23 137.2 9.0 85 91-176 54-146 (153)
5 1sjw_A Nogalonic acid methyl e 99.8 8.6E-18 2.9E-22 127.0 13.0 85 91-176 45-137 (144)
6 2gex_A SNOL; alpha+beta barrel 99.7 3.3E-17 1.1E-21 126.3 11.3 122 30-175 7-136 (152)
7 2gey_A ACLR protein; alpha+bet 99.7 1.1E-16 3.6E-21 124.8 12.3 122 30-176 7-135 (158)
8 3f8h_A Putative polyketide cyc 99.6 8.1E-15 2.8E-19 114.6 11.2 82 91-173 60-150 (150)
9 3i0y_A Putative polyketide cyc 99.6 1E-14 3.5E-19 109.3 11.0 120 30-173 11-140 (140)
10 3f7x_A Putative polyketide cyc 99.5 3.6E-13 1.2E-17 105.1 11.1 119 28-172 21-151 (151)
11 3k0z_A Putative polyketide cyc 99.4 7.4E-13 2.5E-17 104.1 11.3 75 91-175 76-157 (159)
12 4h3u_A Hypothetical protein; s 99.4 1E-12 3.5E-17 102.1 10.1 75 91-173 68-149 (158)
13 3ebt_A Uncharacterized NTF2-li 99.2 3.6E-11 1.2E-15 89.0 8.5 118 30-172 6-131 (132)
14 3er7_A Uncharacterized NTF2-li 99.2 1.8E-11 6.3E-16 95.9 6.5 73 91-172 48-130 (131)
15 3fgy_A Uncharacterized NTF2-li 99.1 1.6E-10 5.6E-15 86.0 8.9 120 29-174 7-133 (135)
16 3ec9_A Uncharacterized NTF2-li 99.1 9.3E-10 3.2E-14 82.7 12.4 123 24-172 9-139 (140)
17 3dm8_A Uncharacterized protein 99.1 1.3E-09 4.5E-14 83.6 11.2 125 27-175 4-136 (143)
18 3grd_A Uncharacterized NTF2-su 99.0 1.8E-09 6.3E-14 80.3 10.6 118 30-173 7-134 (134)
19 1nww_A Limonene-1,2-epoxide hy 98.9 1.1E-08 3.9E-13 77.3 11.3 115 29-174 24-146 (149)
20 2k54_A Protein ATU0742; protei 98.9 2.7E-09 9.2E-14 78.8 5.8 70 91-171 46-122 (123)
21 3g8z_A Protein of unknown func 98.9 1.9E-08 6.6E-13 77.6 10.9 117 28-171 21-145 (148)
22 1s5a_A Hypothetical protein YE 98.9 6.7E-09 2.3E-13 78.0 7.7 124 28-176 11-143 (150)
23 3hk4_A MLR7391 protein; NTF2-l 98.8 1.4E-08 4.7E-13 79.4 8.8 64 91-162 66-136 (136)
24 3g0k_A Putative membrane prote 98.8 5.5E-09 1.9E-13 81.8 4.5 103 34-165 30-137 (148)
25 2a15_A Hypothetical protein RV 98.7 6E-08 2.1E-12 72.5 7.7 120 28-171 8-137 (139)
26 1tuh_A BAL32A, hypothetical pr 98.6 3.9E-07 1.3E-11 69.9 11.2 116 29-172 31-155 (156)
27 3fh1_A Uncharacterized NTF2-li 98.6 1.8E-07 6E-12 69.9 9.0 59 91-163 63-128 (129)
28 1z1s_A Hypothetical protein PA 98.6 9.1E-08 3.1E-12 74.7 6.0 124 27-176 23-155 (163)
29 3jum_A Phenazine biosynthesis 98.5 7.1E-07 2.4E-11 74.3 11.7 76 91-174 87-174 (185)
30 3ff2_A Uncharacterized cystati 98.5 4.1E-07 1.4E-11 66.7 8.7 62 91-161 45-116 (117)
31 1ohp_A Steroid delta-isomerase 98.5 1.1E-07 3.8E-12 67.9 5.2 68 91-170 48-124 (125)
32 2bng_A MB2760; epoxide hydrola 98.5 3.8E-07 1.3E-11 69.5 7.8 113 29-174 17-136 (149)
33 1oh0_A Steroid delta-isomerase 98.5 1.9E-07 6.6E-12 68.3 5.5 68 91-168 50-126 (131)
34 3rga_A Epoxide hydrolase; NTF2 98.4 6.9E-07 2.4E-11 77.0 8.1 79 91-173 181-281 (283)
35 3ff0_A Phenazine biosynthesis 98.4 4.4E-06 1.5E-10 68.3 11.9 76 91-174 65-152 (163)
36 3f14_A Uncharacterized NTF2-li 98.2 2.2E-05 7.4E-10 57.6 11.5 101 30-161 3-110 (112)
37 3g16_A Uncharacterized protein 97.9 3.3E-05 1.1E-09 62.4 8.4 96 44-166 22-128 (156)
38 3h3h_A Uncharacterized snoal-l 97.8 0.00012 4.2E-09 53.8 8.5 60 91-163 58-121 (122)
39 3dxo_A Uncharacterized snoal-l 97.8 0.00016 5.5E-09 54.0 9.0 63 91-165 48-119 (121)
40 3dmc_A NTF2-like protein; stru 97.7 0.0005 1.7E-08 52.3 10.8 96 47-165 27-130 (134)
41 3rga_A Epoxide hydrolase; NTF2 97.5 0.00016 5.5E-09 62.1 6.2 69 91-167 49-127 (283)
42 3mso_A Steroid delta-isomerase 97.0 0.0037 1.3E-07 48.3 9.0 110 31-173 9-128 (143)
43 3f40_A Uncharacterized NTF2-li 96.5 0.011 3.8E-07 43.7 8.0 62 91-169 47-113 (114)
44 3f8x_A Putative delta-5-3-keto 96.5 0.015 5.3E-07 45.6 8.8 114 27-173 16-137 (148)
45 3en8_A Uncharacterized NTF-2 l 96.0 0.034 1.2E-06 41.7 8.5 53 100-163 53-111 (128)
46 3flj_A Uncharacterized protein 96.0 0.011 3.9E-07 47.5 5.9 67 91-173 61-135 (155)
47 3hx8_A MLR2180 protein, putati 94.7 0.26 9E-06 34.8 9.0 100 27-151 2-102 (129)
48 3lyg_A NTF2-like protein of un 94.6 0.16 5.4E-06 39.9 8.1 68 91-167 45-116 (120)
49 1tp6_A Hypothetical protein PA 93.4 0.14 4.9E-06 38.6 5.7 45 91-136 52-99 (128)
50 3d9r_A Ketosteroid isomerase-l 85.1 4.6 0.00016 28.5 7.7 88 31-136 11-99 (135)
51 3gb3_A Killerred; fluorescent 71.4 6.4 0.00022 33.9 5.6 32 99-130 78-109 (235)
52 3ai5_A Yeast enhanced green fl 58.5 15 0.00052 32.3 5.6 32 98-129 82-113 (307)
53 3gzb_A Putative snoal-like pol 58.3 68 0.0023 25.8 8.8 80 91-173 63-153 (154)
54 3evp_A Circular-permutated gre 57.7 13 0.00045 32.1 4.9 32 99-130 181-212 (243)
55 2zmu_A Fluorescent protein; GF 57.5 14 0.00046 31.6 4.9 30 100-129 78-107 (223)
56 2a50_B ASFP595, GFP-like non-f 56.7 10 0.00036 31.0 4.0 30 100-129 15-44 (168)
57 3ako_A Venus; fluorescent prot 54.7 17 0.00059 30.0 4.9 32 98-129 100-131 (173)
58 3rob_A Uncharacterized conserv 52.7 47 0.0016 24.9 6.9 97 30-151 16-113 (139)
59 2c9i_A Green fluorescent prote 50.7 21 0.00072 30.5 5.0 31 99-129 76-106 (226)
60 3u8p_A Cytochrome B562 integra 50.2 19 0.00066 32.5 4.9 67 60-129 154-221 (347)
61 1yzw_A Hcred, GFP-like non-flu 49.8 21 0.00073 30.4 4.9 31 99-129 76-106 (225)
62 3p28_A Green fluorescent prote 49.2 22 0.00075 30.7 4.9 32 99-130 32-63 (239)
63 2hpw_A Green fluorescent prote 49.0 22 0.00076 30.5 4.9 31 99-129 81-111 (233)
64 2hqk_A CYAN fluorescent chromo 48.8 23 0.00078 30.1 4.9 31 99-129 74-104 (219)
65 2icr_A RED fluorescent protein 48.3 23 0.00079 30.5 4.9 31 99-129 87-117 (237)
66 2iov_A Fluorescent protein dro 47.7 24 0.00083 30.7 5.0 31 99-129 108-138 (255)
67 3vht_B Green fluorescent prote 47.2 24 0.00082 31.0 4.9 31 99-129 83-113 (271)
68 3cgl_A GFP-like fluorescent ch 47.2 24 0.00084 30.4 4.9 31 99-129 90-120 (241)
69 3h51_A Putative calcium/calmod 46.0 86 0.0029 23.0 10.3 111 28-164 17-141 (156)
70 2wur_A Green fluorescent prote 45.1 28 0.00095 30.0 4.9 31 99-129 80-110 (236)
71 2jad_A Yellow fluorescent prot 45.0 31 0.0011 31.1 5.4 31 99-129 80-110 (362)
72 2ejo_A Fluorescent protein; GF 44.9 28 0.00097 29.6 4.9 31 100-130 78-108 (223)
73 3ir8_A Large stokes shift fluo 44.5 29 0.00099 29.5 4.9 32 99-130 77-108 (221)
74 2ib5_A Chromo protein, cjblue; 44.1 21 0.0007 30.7 4.0 31 99-129 79-109 (233)
75 2c9j_A Green fluorescent prote 43.8 21 0.00072 30.4 4.0 31 99-129 75-105 (223)
76 2rh7_A Green fluorescent prote 43.5 21 0.00072 30.7 4.0 31 99-129 79-109 (239)
77 3ned_A Pamcherry1 protein; RFP 42.8 31 0.0011 29.7 4.9 32 99-130 92-123 (242)
78 1xmz_A ASCP595, GFP-like chrom 42.3 23 0.00077 30.6 4.0 31 99-129 87-117 (241)
79 3e5t_A FP611;, RED fluorescent 42.2 23 0.00078 30.6 4.0 31 100-130 90-120 (242)
80 2a46_A GFP-like fluorescent ch 41.5 24 0.00081 30.4 4.0 31 99-129 92-122 (238)
81 2g6y_A Green fluorescent prote 40.4 37 0.0013 28.8 4.9 31 99-129 70-101 (217)
82 1p3q_Q VPS9P, vacuolar protein 40.4 5.2 0.00018 27.1 -0.3 24 91-115 9-32 (54)
83 3ai4_A Yeast enhanced green fl 39.8 36 0.0012 30.0 4.9 32 98-129 82-113 (283)
84 2gw3_A Kaede; beta barrel, lum 39.7 22 0.00075 30.3 3.4 31 99-129 77-107 (225)
85 2dd7_A Green fluorescent prote 39.5 34 0.0012 29.0 4.6 31 99-129 67-98 (216)
86 3rwa_A Fluorescent protein FP4 38.2 29 0.00098 29.8 4.0 74 54-130 87-177 (233)
87 3o6u_A Uncharacterized protein 37.3 32 0.0011 26.2 3.8 32 131-162 5-39 (128)
88 3osr_A Maltose-binding peripla 37.3 36 0.0012 32.2 4.9 97 30-130 446-559 (653)
89 2zo6_A CYAN-emitting GFP-like 37.0 31 0.001 30.0 4.0 30 100-129 107-136 (252)
90 2ejh_A CYAN-emitting GFP-like 36.8 31 0.0011 30.0 4.0 45 100-144 110-160 (255)
91 3u0k_A Rcamp; fluorescent prot 30.7 57 0.0019 30.3 4.9 71 54-129 168-257 (440)
92 3r8n_P 30S ribosomal protein S 22.0 16 0.00054 26.6 -0.4 42 47-88 3-45 (82)
93 2dhy_A CUE domain-containing p 21.3 8.9 0.0003 26.8 -1.8 22 91-113 15-36 (67)
94 2gxf_A Hypothetical protein YY 21.1 2E+02 0.0069 20.5 5.6 38 91-128 45-84 (142)
95 3bbn_P Ribosomal protein S16; 20.3 19 0.00063 26.6 -0.4 40 47-86 3-43 (88)
No 1
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=4.1e-20 Score=138.64 Aligned_cols=81 Identities=12% Similarity=-0.007 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
++++...+..++++||+ +.++|.+++++++.|+.+|+..|||+|+|.|++|||++|++.| ||||+++|.++|
T Consensus 41 ~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dGkI~e~~~~~D 119 (128)
T 3ehc_A 41 LSGYRDMLVKDFADIPD-LRFEAEILVSDATRLAARLFFDCTPKSIFMDLPVNGRRVQFCEHVFYDFEQAKIRRVWSVLD 119 (128)
T ss_dssp HHHHHHHHHHHHHHCTT-CCCCEEEEEECSSEEEEEEEEEECCSSEETTEECTTCCEEEEEEEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEEEEcCcccCCCCCCCEEEEEEEEEEEEeCCEEEEEEEccC
Confidence 78999999999999999 9999999999999999999999999999999999999999998 999999999999
Q ss_pred hHHHHHhhc
Q 041144 164 PAELFAGLF 172 (201)
Q Consensus 164 ~~~ll~qL~ 172 (201)
.++||+|||
T Consensus 120 ~~~~~~QlG 128 (128)
T 3ehc_A 120 KVAIERQLG 128 (128)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999999996
No 2
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=99.82 E-value=3.1e-20 Score=142.20 Aligned_cols=84 Identities=20% Similarity=0.270 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
++.+......++++||+ +.++|++++++++.|+++|+..|||.|+|+|++|||+++++.| ||||+++|.++|
T Consensus 54 ~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dGkI~e~~~~~D 132 (146)
T 3kkg_A 54 IEQAIAFNAVLFEGFPR-LEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTD 132 (146)
T ss_dssp HHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCC-ceeEEEEEEEeCCEEEEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEEECCEEEEEEEecC
Confidence 78999999999999999 9999999999999999999999999999999999999999999 999999999999
Q ss_pred hHHHHHhhcCCC
Q 041144 164 PAELFAGLFKGP 175 (201)
Q Consensus 164 ~~~ll~qL~~~~ 175 (201)
.+.|++||+--|
T Consensus 133 ~~~l~~Qlg~~p 144 (146)
T 3kkg_A 133 LLAVMTAISAPP 144 (146)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHHcCCCC
Confidence 999999998643
No 3
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=99.79 E-value=6.9e-19 Score=134.33 Aligned_cols=127 Identities=10% Similarity=0.173 Sum_probs=100.0
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCCh-HHHHHHHHHHHHHhCCC
Q 041144 29 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSM-EETFKSSHDAFRSAFPR 107 (201)
Q Consensus 29 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~-~e~f~~s~~~f~~AFPd 107 (201)
..++|+.++. |+..+-|++....+-.+.+.+.-|-+. ++.+... ++.|......++++||+
T Consensus 8 ~~~~v~~~~~----~~~~~~d~~~~~~~~a~d~~~~~~p~~--------------~~~g~~~G~~~~~~~~~~~~~~~pd 69 (146)
T 3f9s_A 8 AKEILTQFTR----EVWSEGNIEASDKYIAPKYTVLHDPGD--------------PWEGRELDVAGYKERVKTLRAAFPD 69 (146)
T ss_dssp HHHHHHHHHH----HHTTTCCGGGHHHHEEEEEEEEECTTC--------------TTTTCEECHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHH----HHHcCCCHHHHHHHcCCCeeeccCCCC--------------CCCCCcCCHHHHHHHHHHHHhhCCC
Confidence 4556666654 233345666666665666653333221 1111111 78999999999999999
Q ss_pred CceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCC
Q 041144 108 GFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKG 174 (201)
Q Consensus 108 Gf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~ 174 (201)
+.++|.+++++++.|+.+|+..|||+|+|.|++|||++|++.| ||||+++|.++|.+.|++||+.-
T Consensus 70 -~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dGkI~e~~~~~D~~~~~~qlg~~ 142 (146)
T 3f9s_A 70 -QCFDIQGLFADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFDGNRLTGHWQITDRLGVYQQLRQA 142 (146)
T ss_dssp -CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEEETEEEEEEEEECHHHHHHHHHHH
T ss_pred -cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECCEEEEEEEEeCHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999 99999999999999999999864
No 4
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=99.78 E-value=5.9e-19 Score=137.21 Aligned_cols=85 Identities=16% Similarity=0.123 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeee
Q 041144 91 EETFKSSHDAFRSAFP-RGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYY 162 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFP-dGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~ 162 (201)
++++.+....+.++|| + +.++|++++++++.|+++|+..|||.|+|.|++|||++|++.| ||||+++|.++
T Consensus 54 ~~~~~~~~~~~~~~~p~d-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v~dGkI~e~~~~~ 132 (153)
T 2f99_A 54 PELFAINVAWVKKTFSEE-ARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHFVDGKIHHHRDWP 132 (153)
T ss_dssp HHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECCEEEEEEEec
Confidence 8899999999999999 8 9999999999999999999999999999999999999999999 99999999999
Q ss_pred ChHHHHHhhcCCCC
Q 041144 163 HPAELFAGLFKGPV 176 (201)
Q Consensus 163 D~~~ll~qL~~~~~ 176 (201)
|.+.|++||+.-+.
T Consensus 133 D~~~~~~qlg~~p~ 146 (153)
T 2f99_A 133 DYQGTYRQLGEPWP 146 (153)
T ss_dssp CHHHHHHHTTCCCC
T ss_pred CHHHHHHhcCCCCC
Confidence 99999999987654
No 5
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.76 E-value=8.6e-18 Score=127.03 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeee
Q 041144 91 EETFKSSHDAFRSAFP-RGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYY 162 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFP-dGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~ 162 (201)
++++.+.+..++++|| + +.+++++++++++.|+++|+..|+|+|+|.|++|||+++++.| ||||+++|.++
T Consensus 45 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dGkI~~~~~~~ 123 (144)
T 1sjw_A 45 PKAFAQLVGWVRATFSEE-ARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIVDGKIRDHRDWP 123 (144)
T ss_dssp HHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECCEEEEEEEec
Confidence 7899999999999999 8 9999999999999999999999999999999999999999998 99999999999
Q ss_pred ChHHHHHhhcCCCC
Q 041144 163 HPAELFAGLFKGPV 176 (201)
Q Consensus 163 D~~~ll~qL~~~~~ 176 (201)
|.+.|++||+.-+.
T Consensus 124 D~~~~~~qlg~~p~ 137 (144)
T 1sjw_A 124 DFQGTLRQLGDPWP 137 (144)
T ss_dssp CHHHHHHHTTSCCC
T ss_pred CHHHHHHHcCCCCC
Confidence 99999999987654
No 6
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.72 E-value=3.3e-17 Score=126.32 Aligned_cols=122 Identities=17% Similarity=0.221 Sum_probs=98.0
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCc
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGF 109 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf 109 (201)
.++|+.++..| -.-+++.+..+-.+.+.+.... | ...+ ++++.+....+.++||+ +
T Consensus 7 ~~~v~~~~~a~-----~~~d~~~~~~~~a~D~v~~~~~------------~---~~~G---~~~~~~~~~~~~~~~~~-~ 62 (152)
T 2gex_A 7 KERCLEMVAAW-----NRWDVSGVVAHWAPDVVHYDDE------------D---KPVS---AEEVVRRMNSAVEAFPD-L 62 (152)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHTTEEEEEEEECTT------------S---CEEC---HHHHHHHHHHHHHHCTT-C
T ss_pred HHHHHHHHHHH-----hCCCHHHHHHHcCCCeEEeCCC------------C---CCCC---HHHHHHHHHHHHHhCCC-c
Confidence 45666666554 2345666555555555443110 1 1112 78999999999999998 9
Q ss_pred eeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------c-eEEEEEEeeeChHHHHHhhcCCC
Q 041144 110 AWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------D-WDYEDVEIYYHPAELFAGLFKGP 175 (201)
Q Consensus 110 ~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d-~KI~e~w~~~D~~~ll~qL~~~~ 175 (201)
.++|.+++++++.|+++|+..||++|+|.|++|||+++++.| | |||+++|.++|++.|++||+.-+
T Consensus 63 ~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~d~GkI~e~~~~~D~~~~~~qlg~~p 136 (152)
T 2gex_A 63 RLDVRSIVGEGDRVMLRITCSATHQGVFMGIAPTGRKVRWTYLEELRFSEAGKVVEHWDVFNFSPLFRDLGVVP 136 (152)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEECTTSCEEEEEEEEECHHHHHHSTTCH
T ss_pred EEEEEEEEEeCCEEEEEEEEEEEecCCcCCcCCCCCEEEEEEEEEEEEecCCEEEEEEEeccHHHHHHHCCCCC
Confidence 999999999999999999999999999999999999999999 7 99999999999999999998754
No 7
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=99.71 E-value=1.1e-16 Score=124.77 Aligned_cols=122 Identities=18% Similarity=0.177 Sum_probs=98.9
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCc
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGF 109 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf 109 (201)
.++|+.++..| -.-|++.+.++-.+.+.+.. .+ . ..+ ++.+......++++||+ +
T Consensus 7 ~~~v~~~~~a~-----~~~D~~~~~~~~a~D~v~~~-p~------------~---~~G---~~~~~~~~~~~~~~~~~-~ 61 (158)
T 2gey_A 7 KALCLEMVAAW-----NRWDLSGIIKHWSPDIVHYS-ED------------N---EVS---SADMVKLMEGGLKAFPD-L 61 (158)
T ss_dssp HHHHHHHHHHH-----HTTCTHHHHTTEEEEEEEEE-TT------------E---EEC---HHHHHHHHHHHHHHSTT-C
T ss_pred HHHHHHHHHHH-----cCCCHHHHHHHcCCCeEEeC-CC------------C---CCC---HHHHHHHHHHHHHhCCC-c
Confidence 45555555433 33466666666556665543 11 1 112 78899999999999998 9
Q ss_pred eeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCCCC
Q 041144 110 AWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKGPV 176 (201)
Q Consensus 110 ~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~~~ 176 (201)
.++|.+++++++.|+++|+..|+|.|+|.|++|||+++++.| ||||+++|.++|++.|++||+.-+.
T Consensus 62 ~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dGkI~e~~~~~D~~~~~~qlg~~p~ 135 (158)
T 2gey_A 62 QLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRFVDGKVVEHWDVINMRPLLVRLGKLPD 135 (158)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETTEEEEEEEEEECHHHHHHTTSSCC
T ss_pred EEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECCEEEEEEEecCHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999998 9999999999999999999987653
No 8
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=99.59 E-value=8.1e-15 Score=114.62 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEee-eCCCeEEEEEEEEeeeeccccccC-CCCCEEEEEe-------ceEEEEEEee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVY-SGPPMVAYKFKHWGYFEGPFQGHA-PTGEMVEFLW-------DWDYEDVEIY 161 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~-sgpp~VafkwRhwGt~~G~F~G~~-PTG~~Vei~G-------d~KI~e~w~~ 161 (201)
++.+......+.++||+ ...++.-+. ++|++|+++|+..|+|.|+|.|+| |||++|++.| ||||+++|.|
T Consensus 60 ~e~i~~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~~dGkI~~~~~y 138 (150)
T 3f8h_A 60 KEKFAAFCAHMSHCYKE-ELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSYKLPAGSFFDLRDGLITRVTTY 138 (150)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCc-cccceEEEEecCCCEEEEEEEEEEEEecCCCCCcCCCCCEEEEeeeEEEEEeCCEEEEEEEE
Confidence 78899999999999998 444433333 689999999999999999999999 9999999999 9999999999
Q ss_pred eChHHHHHhhcC
Q 041144 162 YHPAELFAGLFK 173 (201)
Q Consensus 162 ~D~~~ll~qL~~ 173 (201)
||...||+||++
T Consensus 139 ~D~~~~~~Qlg~ 150 (150)
T 3f8h_A 139 YNLSDWIKQVSA 150 (150)
T ss_dssp ECHHHHHHHHHC
T ss_pred CCHHHHHHHhcC
Confidence 999999999983
No 9
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=99.59 E-value=1e-14 Score=109.27 Aligned_cols=120 Identities=15% Similarity=0.149 Sum_probs=90.2
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCc
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGF 109 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf 109 (201)
.++|+.+... .-.-|++....+-.+.+.+..++|. ...+ ++.+......|..+|+.
T Consensus 11 ~~~v~~~~~a-----~~~~D~~~~~~l~a~D~~~~~p~~~--------------~~~G---~~~~~~~~~~~~~~~~~-- 66 (140)
T 3i0y_A 11 TGLVQAYYEA-----FNRGDWDAMLAFLAEDVAHDLNQGP--------------REIG---RAAFASFLQRMNDSYRE-- 66 (140)
T ss_dssp HHHHHHHHHH-----HHHTCHHHHHHTEEEEEEEECTTSC--------------EEES---HHHHHHHHHHHHHHEEE--
T ss_pred HHHHHHHHHH-----HHcCCHHHHHHHcCCcEEEEcCCCC--------------ceEc---HHHHHHHHHHHhhhcch--
Confidence 3566666544 3456777777776666665554322 1222 66777777777777764
Q ss_pred eeEEEEee--eCCCeEEEEEEEEeeeeccccccC-CCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcC
Q 041144 110 AWELISVY--SGPPMVAYKFKHWGYFEGPFQGHA-PTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFK 173 (201)
Q Consensus 110 ~wEVleV~--sgpp~VafkwRhwGt~~G~F~G~~-PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~ 173 (201)
.++.+.++ +++++|+.+|+..|+|+|+|.|+| |||+++++.| ||||+++|.|||.+.||+|||.
T Consensus 67 ~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~~dGkI~~~~~y~D~~~~~~QlG~ 140 (140)
T 3i0y_A 67 QLRDIVVTANDEGTRVGAEYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDVRDGQITRVTNYYNLQEWIAQVSR 140 (140)
T ss_dssp EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEEETTEEEEEEEEECHHHHHHHHTC
T ss_pred hhhheeeeecccCCEEEEEEEEEEEeecccCCCcCCCCCEEEEEeeEEEEEECCEEEEEEEEcCHHHHHHhhcC
Confidence 34333332 789999999999999999999998 9999999998 9999999999999999999984
No 10
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=99.47 E-value=3.6e-13 Score=105.09 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=92.5
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCC
Q 041144 28 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPR 107 (201)
Q Consensus 28 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPd 107 (201)
...++|+.+...| -+-|++.+..+-.+.+.+..+.|. .+.+ ++.+......+.++|+
T Consensus 21 ~~~~lv~~~~~a~-----~~~D~~~l~~l~a~D~v~~~p~g~--------------~~~G---~e~i~~~~~~~~~~~~- 77 (151)
T 3f7x_A 21 TATELVNAYYAAF-----NAGDMPAFLALLSEDVIHDINQGE--------------RQMG---KARFAAFMEKMNRCYR- 77 (151)
T ss_dssp CHHHHHHHHHHHH-----HHTCHHHHHHTEEEEEEEECTTSC--------------EEES---HHHHHHHHHHHHHHEE-
T ss_pred HHHHHHHHHHHHH-----HcCCHHHHHHhcCCCEEEECCCCC--------------CcCC---HHHHHHHHHHHHHhhc-
Confidence 4467777777655 356777777777777776543331 2222 6777777777777764
Q ss_pred CceeEEEEee----eCCCeEEEEEEEEeeeeccccccC-CCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhc
Q 041144 108 GFAWELISVY----SGPPMVAYKFKHWGYFEGPFQGHA-PTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLF 172 (201)
Q Consensus 108 Gf~wEVleV~----sgpp~VafkwRhwGt~~G~F~G~~-PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~ 172 (201)
.++.+++ ++|++|+.+|+..|+|.|+|.|+| |||+++++.+ ||||++++.|||..+||+||.
T Consensus 78 ---~~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~~dGkI~~~~~y~D~~~~l~Ql~ 151 (151)
T 3f7x_A 78 ---ERLADIVVMQNADGSRAAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYIHCGKIARVTNYYNLNDWVEQVA 151 (151)
T ss_dssp ---EEEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEEETTEEEEEEEEECHHHHHHHHC
T ss_pred ---cceeEEEEEEecCCCEEEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEEECCEEEEEEEECCHHHHHHhhC
Confidence 3444444 899999999999999999999999 9999999998 999999999999999999994
No 11
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=99.44 E-value=7.4e-13 Score=104.14 Aligned_cols=75 Identities=16% Similarity=0.103 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
+++|...+..++++||+ +.++|.+++++++.|+++|+..|+|. |++|++.| ||||+++|.++|
T Consensus 76 ~e~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~---------G~~v~~~~~~i~r~~dGkI~e~~~~~D 145 (159)
T 3k0z_A 76 TEGLKFAAQNFRKIVPN-IHCEIEDLLVVGDKVTARLSFTGTHN---------DKKIDFFAIDILHVKDGKITEDWHLED 145 (159)
T ss_dssp HHHHHHHHHHHHTTCCS-EEEEEEEEEEETTEEEEEEEEEEEET---------TEEEEEEEEEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCC-cEEEEEEEEEECCEEEEEEEEEEEEC---------CeEEEEEEEEEEEEECCEEEEEEEeeC
Confidence 78999999999999999 99999999999999999999999987 99999888 999999999999
Q ss_pred hHHHHHhhcCCC
Q 041144 164 PAELFAGLFKGP 175 (201)
Q Consensus 164 ~~~ll~qL~~~~ 175 (201)
.+.||+|||--|
T Consensus 146 ~~~ll~QLG~~P 157 (159)
T 3k0z_A 146 NLTLKQQLGLIA 157 (159)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHHcCCCC
Confidence 999999998643
No 12
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=99.41 E-value=1e-12 Score=102.11 Aligned_cols=75 Identities=9% Similarity=0.003 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
++.++..+..+.++||+ +.++|.++++++++|+++|+..|++. +||++|++.| ||||++.+.|||
T Consensus 68 reai~~~~~~~~~~~~d-~~~~v~~~~~~gd~v~~~~~~~gt~~-------~tG~~~~~~~~~v~~~~dGkI~~~~~y~D 139 (158)
T 4h3u_A 68 REQISGWKARTDAMIEN-VHVTITKAYRAGDHVTIEAVYGGHIK-------GAPTPFAVPMATLLRTRGEEITSDQDYYS 139 (158)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TSSSCEEEEEEEEEEEETTEEEEEEEEEC
T ss_pred chhhhhhhhhhhccCCc-cceeEeEEeecCceEEEEEEEEEEec-------CccCcceeeeEEEEEEECCEEEEEEEEEC
Confidence 88999999999999998 99999999999999999999999985 4999999998 999999999999
Q ss_pred hHHHHHhhcC
Q 041144 164 PAELFAGLFK 173 (201)
Q Consensus 164 ~~~ll~qL~~ 173 (201)
.+.||+|||-
T Consensus 140 ~~~ll~QlGl 149 (158)
T 4h3u_A 140 LSSVLAQSGL 149 (158)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999999984
No 13
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=99.22 E-value=3.6e-11 Score=89.01 Aligned_cols=118 Identities=8% Similarity=0.030 Sum_probs=86.8
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCC-CCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCC
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGR-KGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRG 108 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg-~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdG 108 (201)
.++|+.++..| -+-|++.+..+-.+.+.+...+| .++... | ...+ ++.+......+.++||+
T Consensus 6 ~~~v~~~~~a~-----~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~-----~---~~~G---~~~~~~~~~~~~~~~~~- 68 (132)
T 3ebt_A 6 MQTVRESYEAF-----HRRDLPGVLAALAPDVRWTHPDGMSPYGLG-----G---TKHG---HDEVIAFIRHVPTHIAE- 68 (132)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHTTEEEEEEEEECGGGGGGTCC-----E---EEEH---HHHHHHHHHHGGGTEEE-
T ss_pred HHHHHHHHHHH-----hccCHHHHHHhcCCCEEEEeCCCCCCcccC-----C---cCcC---HHHHHHHHHHHHhhCCc-
Confidence 35566665543 23456666666566666555433 111000 0 1111 78888899999999998
Q ss_pred ceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhc
Q 041144 109 FAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLF 172 (201)
Q Consensus 109 f~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~ 172 (201)
+.+++.+++++++.|++.|++. |.+|||+++++.+ ||||+++|.|+|++.|+++|.
T Consensus 69 ~~~~~~~~~~~gd~v~v~~~~~--------~~~~~G~~~~~~~~~v~~~~dGkI~~~~~y~D~~~~~~~l~ 131 (132)
T 3ebt_A 69 MRLAPDEFIESGERIVVLGTRR--------VTAVNGRSATLKFVHVWRFENGRAVTFEDHFDTAEMIRLIT 131 (132)
T ss_dssp EEEEEEEEEEETTEEEEEEEEE--------EEETTSCEEEEEEEEEEEEETTEEEEEEEECCHHHHHHHHC
T ss_pred eEEEEeEEEEeCCEEEEEEEEE--------EEeCCCCEEeeeEEEEEEEECCEEEEEEEEeeHHHHHHHhc
Confidence 9999999999999999998875 4589999998888 999999999999999999985
No 14
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=99.20 E-value=1.8e-11 Score=95.91 Aligned_cols=73 Identities=8% Similarity=-0.036 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEE--eeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEe
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELIS--VYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEI 160 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVle--V~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~ 160 (201)
++.+++.+..|+.|||+ ..+.+.. +.++++.|+++|+..|+ +++|++|++.| ||||+++|.
T Consensus 48 ~~ai~~F~~~~~~a~~~-~~~~~~~~v~~~~gd~~~~~w~~~g~--------~~~G~~~~~~g~dv~~fd~dGkI~~~~~ 118 (131)
T 3er7_A 48 IDAWKQFVRMVFTANQD-IKHMYAGWVPSETGDTMETRWAVCGK--------SADGSVFTQDGTDIARLNADGKIVYLAN 118 (131)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEECCCEECSSTTCEEEEEEEEEE--------ETTSCEEEEEEEEEEEECTTSCEEEEEE
T ss_pred hHHHHHHHHHHHhhCcC-ceEEEEEEEEecCCCEEEEEEEEEEE--------ECCCCEEEEeeeEEEEEcCCCcEEEEEE
Confidence 89999999999999999 7755543 46788999999999999 88999999999 799999999
Q ss_pred eeChHHHHHhhc
Q 041144 161 YYHPAELFAGLF 172 (201)
Q Consensus 161 ~~D~~~ll~qL~ 172 (201)
++|.++||+||.
T Consensus 119 ~~d~~~~~~q~~ 130 (131)
T 3er7_A 119 VPDDTAMFNQYN 130 (131)
T ss_dssp EECCC-------
T ss_pred ccChHHHHHHhc
Confidence 999999999984
No 15
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=99.14 E-value=1.6e-10 Score=85.97 Aligned_cols=120 Identities=12% Similarity=0.029 Sum_probs=94.5
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCC
Q 041144 29 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRG 108 (201)
Q Consensus 29 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdG 108 (201)
-.++|+.+...|. +-|++.+.++-.+.+.+...|+.++. |.| .+ ++.+...+..+.++||+
T Consensus 7 ~~~~v~~~~~a~~-----~~d~~~~~~l~a~D~~~~~p~~~p~~-------g~~---~G---~~~i~~~~~~~~~~~~~- 67 (135)
T 3fgy_A 7 NVQIVKDFFAAMG-----RGDKKGLLAVSAEDIEWIIPGEWPLA-------GTH---RG---HAALAALLQKASEMVEI- 67 (135)
T ss_dssp HHHHHHHHHHHHH-----HTCHHHHHHTEEEEEEEEECSSSTTC-------EEE---EH---HHHHHHHHHHHHHHEEE-
T ss_pred HHHHHHHHHHHHH-----cCCHHHHHHhcCCCeEEEEcCCCccc-------eEE---eC---HHHHHHHHHHHHHhhCc-
Confidence 3567777766543 45777777777777776665532211 111 11 77888889999999998
Q ss_pred ceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCC
Q 041144 109 FAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKG 174 (201)
Q Consensus 109 f~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~ 174 (201)
+.+++.+++++++.|++.|+..|++ ++||+++++.+ ||||+++|.|+|++.|.++|.++
T Consensus 68 ~~~~~~~~~~~gd~v~v~~~~~~~~-------~~~G~~~~~~~~~~~~~~dGkI~~~~~y~D~~~l~~a~~~~ 133 (135)
T 3fgy_A 68 SYPEPPEFVAQGERVLVVGFATGRV-------KSTNRTFEDDWVFAITVRKSKVTSIREYIDTLALARATNFN 133 (135)
T ss_dssp ECSSCCEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEEETTEEEEEEEECBHHHHHHHTTTC
T ss_pred ceeeeEEEEEcCCEEEEEEEEeEEE-------cCCCCEecccEEEEEEEECCEEEEEEEEecHHHHHHHhcCC
Confidence 9999999999999999999998885 79999998877 99999999999999999999875
No 16
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=99.13 E-value=9.3e-10 Score=82.75 Aligned_cols=123 Identities=8% Similarity=0.035 Sum_probs=95.5
Q ss_pred CCCCCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHH-HHHHHHHH
Q 041144 24 WPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETF-KSSHDAFR 102 (201)
Q Consensus 24 ~~~gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f-~~s~~~f~ 102 (201)
+..-+-.++|+.+...|. .-|++.+..+-.+.+.+...++.++. |.| -+ ++.+ +..+..+.
T Consensus 9 ~~m~~~~~~v~~~~~a~~-----~gD~~~~~~l~a~D~~~~~~~~~p~~-------g~~---~G---~~~i~~~~~~~~~ 70 (140)
T 3ec9_A 9 HMMRTPYQIVADHYAASD-----RHDPAAMMADIAPAIEWTEMAGFPCA-------GTY---RS---ADEIVRNVFRRLG 70 (140)
T ss_dssp --CCCHHHHHHHHHHHHH-----TTCHHHHHTTEEEEEEEEECTTSTTC-------EEE---CS---HHHHHHHTHHHHH
T ss_pred cccchHHHHHHHHHHHHh-----CCCHHHHHHhcCCCeEEEEcCCCccc-------eEE---cC---HHHHHHHHHHHHH
Confidence 333455678888877543 56777787777777777776543321 111 12 6788 46788899
Q ss_pred HhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhc
Q 041144 103 SAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLF 172 (201)
Q Consensus 103 ~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~ 172 (201)
.+||+ +.+++.+++++++.|++.|+..|++ ++||+.+++.+ ||||++++.|+|++.+++.|.
T Consensus 71 ~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~v~dGkI~~~~~y~D~~~~~~a~~ 139 (140)
T 3ec9_A 71 EEWDG-YTFKLDALHDAGDTVIGVGRYSGTY-------RRTGKSFECRVAHVWRVDAGKIVHFEQFTDTLLVAQAMQ 139 (140)
T ss_dssp HHEEE-EEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEEETTEEEEEEEEEBHHHHHHHHC
T ss_pred hhCCc-ceeEEEEEEEcCCEEEEEEEEEEEE-------cCCCCEEEeEEEEEEEEECCEEEEEEEEEcHHHHHHhhC
Confidence 99998 9999999999999999999999886 58999998877 999999999999999999885
No 17
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=99.07 E-value=1.3e-09 Score=83.58 Aligned_cols=125 Identities=10% Similarity=0.076 Sum_probs=96.2
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCC-CChhhhhhcCcccccCCCChHHHHHHHHHHHHHhC
Q 041144 27 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKG-LSREESLQLGSYNALLNNSMEETFKSSHDAFRSAF 105 (201)
Q Consensus 27 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~-~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AF 105 (201)
-++.++|+.+.. +.-+-|++.+.++-.+.+.+...|... +.. .|.| -+ ++.+......+.++|
T Consensus 4 ~~~~~~v~~~~~-----a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~-----~g~~---~G---~~av~~~~~~~~~~~ 67 (143)
T 3dm8_A 4 HSLWRFSRALHR-----ALNDRQTEELATIIDDNIDWAIYGPIDMFPF-----FGAR---QG---KAAVLEVCRQIADSV 67 (143)
T ss_dssp CHHHHHHHHHHH-----HHHHCCCHHHHHHEEEEEEEEEESCTTTCTT-----CEEE---ES---HHHHHHHHHHHHHHE
T ss_pred chHHHHHHHHHH-----HHHCCCHHHHHHhcCCCeEEEecCCCCcCCC-----Cccc---cC---HHHHHHHHHHHHHhc
Confidence 367777777765 444678888888877777777654320 000 0221 12 778888889999999
Q ss_pred CCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCCC
Q 041144 106 PRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKGP 175 (201)
Q Consensus 106 PdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~~ 175 (201)
++ +.+++.++++++++|+..++..|+ +++||+++++.+ ||||++++.|||.+.+++|+...+
T Consensus 68 ~~-~~~~~~~~~~~gd~v~v~~~~~~~-------~~~tG~~~~~~~~~~~~v~dGkI~~~r~y~D~~~l~~q~~g~~ 136 (143)
T 3dm8_A 68 RI-YRYHRESVMLGIDSAASMVRYSLT-------AAGTNRPISVRMALFTQFQNGRLTNLRMVLDTFDLVEQALGRP 136 (143)
T ss_dssp EE-EEEEEEEEEECSSEEEEEEEEEEE-------ETTTCCEEEEEEEEEEEEETTEEEEEEEEECHHHHHHHHHTC-
T ss_pred Cc-ceEEEEEEEEcCCeEEEEEEEEEE-------EeCCCCEEEEEEEEEEEEECCEEEEEEEEEcHHHHHHHHhCCC
Confidence 98 999999999999999987776654 579999998888 999999999999999999998654
No 18
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=99.04 E-value=1.8e-09 Score=80.34 Aligned_cols=118 Identities=12% Similarity=0.121 Sum_probs=88.9
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHH-HHHHHHHHhCCCC
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFK-SSHDAFRSAFPRG 108 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~-~s~~~f~~AFPdG 108 (201)
.++|+.+.+.| -+-|++.+..+-.+.+.+...|+.++. |.| -+ ++.+. ..+..+.++||+
T Consensus 7 ~~~v~~~~~a~-----~~~D~~~~~~l~a~D~~~~~~~~~p~~-------g~~---~G---~~~~~~~~~~~~~~~~~~- 67 (134)
T 3grd_A 7 LEIIRSTYEGS-----ASSNAKHLAEALSEKVEWTEAEGFPYG-------GTY---IG---VEAIMENVFSRLGSEWND- 67 (134)
T ss_dssp HHHHHTTTSSC-----HHHHHHHHHHHEEEEEEEEECTTSTTC-------EEE---ES---HHHHHHHTHHHHHHHEEE-
T ss_pred HHHHHHHHHHH-----hcCCHHHHHHhcCCCeEEEecCCcccC-------cEE---eC---HHHHHHHHHHHHHhhccc-
Confidence 45556555543 234566666666666666665543221 111 12 67776 467889999998
Q ss_pred ceeEEEEe--eeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcC
Q 041144 109 FAWELISV--YSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFK 173 (201)
Q Consensus 109 f~wEVleV--~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~ 173 (201)
+.+++.++ +++++.|+..|+..|++ +|||+++++.+ ||||++++.|+|++.+.+.|.+
T Consensus 68 ~~~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~~~dGkI~~~~~y~D~~~~~~al~~ 134 (134)
T 3grd_A 68 YKASVNMYHEVSGKDVIIAEGMYSGVY-------KDTGKSFEAEFVHVWQLENGKIVKFKQYVDSHLVREAMKS 134 (134)
T ss_dssp EEEEEEEEEEBTTSSEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEEETTEEEEEEEEECHHHHHHHTCC
T ss_pred cccchhheeeecCCCEEEEEEEEeeEE-------CCCCCEeeeeEEEEEEEECCEEEEEEEEechHHHHHHhhC
Confidence 99999998 99999999999998885 68999998888 9999999999999999998853
No 19
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=98.93 E-value=1.1e-08 Score=77.32 Aligned_cols=115 Identities=10% Similarity=-0.004 Sum_probs=89.7
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCC
Q 041144 29 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRG 108 (201)
Q Consensus 29 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdG 108 (201)
..++|+.++..| -+-|++.+.++-.+.+.+..-|. + .+.+ ++.+......+..+||
T Consensus 24 ~~~~v~~~~~a~-----~~~D~~~l~~l~a~D~~~~~~~~-----------~---~~~G---~~~i~~~~~~~~~~~~-- 79 (149)
T 1nww_A 24 DEKIVLEFMDAL-----TSNDAAKLIEYFAEDTMYQNMPL-----------P---PAYG---RDAVEQTLAGLFTVMS-- 79 (149)
T ss_dssp HHHHHHHHHHHG-----GGCCHHHHHTTBCSSCEEEETTS-----------C---CEES---HHHHHHHHHHHHHHEE--
T ss_pred HHHHHHHHHHHH-----hcCCHHHHHHHhCCCEEEEcCCC-----------C---CccC---HHHHHHHHHHHHhhCC--
Confidence 466777776655 34566777766666666654321 1 1223 7888888889999998
Q ss_pred c-eeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCC
Q 041144 109 F-AWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKG 174 (201)
Q Consensus 109 f-~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~ 174 (201)
+ .+++.+++++++.|+..|+..|++ +|+|+.+++.+ ||||++++.|+|+..|++||+-.
T Consensus 80 ~~~~~~~~~~~~gd~v~~~~~~~~~~-------~~~G~~~~~~~~~~~~~~dGkI~~~~~~~d~~~l~~qlg~~ 146 (149)
T 1nww_A 80 IDAVETFHIGSSNGLVYTERVDVLRA-------LPTGKSYNLSILGVFQLTEGKITGWRDYFDLREFEEAVDLP 146 (149)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEEETTEEEEEEEECCHHHHHHHHTCC
T ss_pred cceEEEEEEEecCCEEEEEEEEEEEE-------cCCCCEEEEeeEEEEEEeCCEEEEEehhcCHHHHHHHhCCC
Confidence 8 899999999999999988887764 68999988887 99999999999999999999853
No 20
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=98.87 E-value=2.7e-09 Score=78.76 Aligned_cols=70 Identities=13% Similarity=0.004 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
++.+......+..+ |+ +.+++++++++|+.|+.+|+.+|++ |+|+. ++.+ ||||+++|.++|
T Consensus 46 ~~ai~~~~~~~~~~-~~-~~~~~~~~~~~gd~v~~~~~~~g~~--------~~~~~-~~~~~~vf~v~dGkI~~~~~~~d 114 (123)
T 2k54_A 46 AAEIRVRHIERFKE-PD-LYGELLTRVIVGNVVIDHETVTRNF--------PEGKG-EVDVACIYEVENGRIAKAWFKIG 114 (123)
T ss_dssp HHHHHHHHHHHTTC-TT-CEEEEEEEEEETTEEEEEEEEECCB--------TTBCC-EEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCC-CC-cEEEEEEEEEECCEEEEEEEEEeEC--------CCCce-EEEEEEEEEEECCEEEEEEEEcC
Confidence 78888888877777 98 9999999999999999999987663 44442 3333 999999999999
Q ss_pred hHHHHHhh
Q 041144 164 PAELFAGL 171 (201)
Q Consensus 164 ~~~ll~qL 171 (201)
++++|+||
T Consensus 115 ~~~~~~q~ 122 (123)
T 2k54_A 115 EPRIVSQK 122 (123)
T ss_dssp EEECGGGC
T ss_pred Chhhhhcc
Confidence 99999998
No 21
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=98.87 E-value=1.9e-08 Score=77.60 Aligned_cols=117 Identities=10% Similarity=0.047 Sum_probs=91.4
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCC
Q 041144 28 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPR 107 (201)
Q Consensus 28 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPd 107 (201)
+-.++|+++...|. .-|++....+-.+.+.+...|+.++. | ...+ ++.+......+..+||+
T Consensus 21 ~n~~~v~~~~~a~~-----~gD~~~l~~l~a~D~v~~~p~~~~~~-------g---~~~G---~~~v~~~~~~~~~~~~~ 82 (148)
T 3g8z_A 21 NTIDIAKSYITAIQ-----TGDHATLGSIISPDVIWHQPGNHQFS-------G---THRG---MAVVGPMLGKMMEVSNG 82 (148)
T ss_dssp CHHHHHHHHHHHHH-----HTCHHHHHHHEEEEEEEEECSSSTTC-------E---EEES---HHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHh-----cCCHHHHHHHcCCCEEEEcCCCCCCC-------c---eEcC---HHHHHHHHHHHHHhcCC
Confidence 34667777776553 45777777777788877766543211 1 1112 78888899999999995
Q ss_pred CceeEE-EEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhh
Q 041144 108 GFAWEL-ISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGL 171 (201)
Q Consensus 108 Gf~wEV-leV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL 171 (201)
.|.++. .+++++++.|+++|+..|+ ++|+.+++.| ||||+++|.|+|++.+.+.+
T Consensus 83 ~~~~~~i~~~~~~gd~v~v~~~~~~~---------~~G~~~~~~~~~v~~~~dGkI~e~~~y~D~~~~~~af 145 (148)
T 3g8z_A 83 TFAISRADDYMASGDWVAITLEFSGQ---------ANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQEDAF 145 (148)
T ss_dssp CCEEEEEEEEEEETTEEEEEEEEEEE---------ETTEEEEEEEEEEEEEETTEEEEEEEEESCHHHHHHH
T ss_pred ceEEEecceEEecCCEEEEEEEEEEE---------eCCcEEEeeEEEEEEEECCEEEEEEEecCCHHHHHHh
Confidence 589885 8999999999999998886 6999998888 99999999999999998775
No 22
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=98.86 E-value=6.7e-09 Score=78.05 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=91.3
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCC
Q 041144 28 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPR 107 (201)
Q Consensus 28 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPd 107 (201)
+..++|+.++..| -+-|++.+.++-.+.+.+....++ .|.-..+.+ ++.+...+..+..+||+
T Consensus 11 ~~~~~v~~~~~a~-----~~~D~~~l~~l~a~D~~~~~p~~~---------~g~~~~~~G---~~~i~~~~~~~~~~~~~ 73 (150)
T 1s5a_A 11 KACETLRKFMAYM-----LEKDMKSWTELWDENAVFEFPYAP---------EGSPKRIEG---KAAIYDYIKDYPKQIHL 73 (150)
T ss_dssp HHHHHHHHHHHHH-----HTTCHHHHHTTEEEEEEEECTTCC---------TTSCSEEES---HHHHHHHHTTHHHHEEE
T ss_pred CHHHHHHHHHHHH-----hcCCHHHHHHhCCCCEEEEeecCC---------CCCCccccC---HHHHHHHHHHhhhcCCc
Confidence 3566777777665 345677777776666666542110 010001112 77888888888899997
Q ss_pred Ccee--EEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCCCC
Q 041144 108 GFAW--ELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKGPV 176 (201)
Q Consensus 108 Gf~w--EVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~~~ 176 (201)
+.+ +++.++++++.|++.|+..|+ ++++|+++++.+ ||||++++.|+|+..+++||+....
T Consensus 74 -~~~~~~~~~~~~~gd~v~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~dGkI~~~~~~~d~~~l~~~lg~~~~ 143 (150)
T 1s5a_A 74 -SSFTAPTVYRSADSNTVIAEFQCDGH-------VIETGLPYRQSYISVIETRDGRIVRYRDYWNPLVVKEAFGGSFL 143 (150)
T ss_dssp -EEECCCEEEEBSSSSEEEEEEEEEEE-------ETTTCCBCCCEEEEEEEEETTEEEEEEEEECHHHHHHHTTTCCC
T ss_pred -ccceeEEEEEecCCCEEEEEEEEEEE-------EcCCCCEEEEEEEEEEEEeCCEEEEEEEeeChHHHHHHcCCCcC
Confidence 887 778889999999999999887 478999776666 9999999999999999999987543
No 23
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=98.82 E-value=1.4e-08 Score=79.36 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYY 162 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~ 162 (201)
++.++.....|+.+||. ..++|.++++.+++|+++|+..|||. |||++|++.| ||||++.+.||
T Consensus 66 ~eai~~~~~~~~~~~~~-~~~~i~~~~v~gd~v~v~~~~~gth~-------~tG~~i~~~~i~v~rv~DGkIv~~rffy 136 (136)
T 3hk4_A 66 KEALRQKSQWWQENHEV-HGGSVEGPYVNGDQFALRFKFDVTPK-------ATGERVTMDEVGLYTVKNGKITEERFYY 136 (136)
T ss_dssp HHHHHHHHHHHHHTEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TTCCCEEEEEEEEEEEETTEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCe-eeeeecceEEcCCEEEEEEEEEEEEC-------CCCcEEEEEEEEEEEEECCEEEEEEecC
Confidence 77888888889999996 78999999999999999999999994 7999999999 99999999997
No 24
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=98.76 E-value=5.5e-09 Score=81.84 Aligned_cols=103 Identities=9% Similarity=-0.066 Sum_probs=72.1
Q ss_pred HHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCceeEE
Q 041144 34 QNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGFAWEL 113 (201)
Q Consensus 34 qnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf~wEV 113 (201)
..+|+.|-=|+.-+-|++.......+.|..- | +... .-+++|......++++||+ +.++|
T Consensus 30 k~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h-~-----------------P~~~-~G~e~~~~~~~~~~~~~pd-~~~~i 89 (148)
T 3g0k_A 30 HDLVIEMYNKVLIAMDSSAVDRYIAPGYVQH-S-----------------SLAE-PSVEALKGFLDRVRAESPD-ARQTI 89 (148)
T ss_dssp HHHHHHHHHHTTTTTCGGGGGGTEEEEEEEC-C-----------------SSSC-SSHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcCeEEc-C-----------------CCCC-CCHHHHHHHHHHHHHhCCC-ceEEE
Confidence 3344444444555556666655555554432 1 1110 1178999999999999998 99999
Q ss_pred EEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-----ceEEEEEEeeeChH
Q 041144 114 ISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-----DWDYEDVEIYYHPA 165 (201)
Q Consensus 114 leV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-----d~KI~e~w~~~D~~ 165 (201)
.+++++||.|+.+|+..+ .|+|+.+.+.. ||||+|+|...|+.
T Consensus 90 ~~iiaeGD~V~~~~~~~~---------~~~g~~~~~~difr~~dGkIvEhWd~~q~~ 137 (148)
T 3g0k_A 90 HRSFVDGDHVITHTHVER---------WPGDAGLAVVDIFRVEGGMIVEHWDVIQDV 137 (148)
T ss_dssp EEEEEETTEEEEEEEEEC---------STTCCCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEECCEEEEEEEEEE---------CCCCccEEEEEEEEEECCEEEEEccccccc
Confidence 999999999999999763 26676553333 99999999998754
No 25
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=98.67 E-value=6e-08 Score=72.47 Aligned_cols=120 Identities=13% Similarity=0.038 Sum_probs=80.6
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCC
Q 041144 28 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPR 107 (201)
Q Consensus 28 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPd 107 (201)
.+.++|+..++.| -+-|++.+.++-.+...+.-..+... +..-|+ .+-+ ++.+......+..+| +
T Consensus 8 ~~~~~v~~~~~a~-----~~~D~~~~~~l~a~D~v~~~p~~~~~----~~~~g~--~~~G---~~ai~~~~~~~~~~~-~ 72 (139)
T 2a15_A 8 PALIASQSSWRCV-----QAHDREGWLALMADDVVIEDPIGKSV----TNPDGS--GIKG---KEAVGAFFDTHIAAN-R 72 (139)
T ss_dssp HHHHHHHHHHHHH-----HTTCHHHHHHTEEEEEEEESSSSSBT----TBTTSS--CEES---HHHHHHHHHHHTTTT-T
T ss_pred HHHHHHHHHHHHH-----hCCCHHHHHHhcCCCEEEECCCCCCc----cCCCCc--eeec---HHHHHHHHHHhcccc-e
Confidence 3556666666544 34566666666555544432111100 000000 0112 778888888888888 6
Q ss_pred CceeEEEE--eeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEeeeChHHHHHhh
Q 041144 108 GFAWELIS--VYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIYYHPAELFAGL 171 (201)
Q Consensus 108 Gf~wEVle--V~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~~D~~~ll~qL 171 (201)
+.+++.+ +...++.|++.|+..+++ |+|+++.+.| +|||++++.|||+..|++||
T Consensus 73 -~~~~~~~~~i~~~g~~~~~~~~~~~~~--------~~G~~~~~~~~~~~~~~~dGkI~~~~~y~d~~~~~~ql 137 (139)
T 2a15_A 73 -LTVTCEETFPSSSPDEIAHILVLHSEF--------DGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGN 137 (139)
T ss_dssp -CEEEEEEEEECSSTTEEEEEEEEEEEE--------TTTEEEEEEEEEEEEECTTSCEEEEEEECCGGGCEEEC
T ss_pred -eEEeccCceEeecCCEEEEEEEEEEEe--------CCCCEEEEEEEEEEEECCCCeEEEeehhcCHHHHHhhh
Confidence 9998874 338999999999987653 7899888887 69999999999999999999
No 26
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=98.62 E-value=3.9e-07 Score=69.95 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=87.6
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCC-
Q 041144 29 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPR- 107 (201)
Q Consensus 29 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPd- 107 (201)
..++|+.++..| -.-|++.+.++-.+.+.+..-++.++. |. +.+ ++.+...+..+ .++|+
T Consensus 31 ~~~~v~~~~~a~-----~~gD~~~l~~l~a~D~~~~~~~~~~~~-------g~---~~G---~~~i~~~~~~~-~~~~~~ 91 (156)
T 1tuh_A 31 NAETVRRGYAAF-----NSGDMKTLTELFDENASWHTPGRSRIA-------GD---HKG---REAIFAQFGRY-GGETGG 91 (156)
T ss_dssp HHHHHHHHHHHH-----HHTCHHHHHHHEEEEEEEEECSSSTTC-------EE---EES---HHHHHHHHHHH-HHTTTT
T ss_pred HHHHHHHHHHHH-----hCCCHHHHHHhcCCCEEEEccCCCCcc-------ce---EcC---HHHHHHHHHHH-HhhcCC
Confidence 356677766654 446778888887777877766554321 11 112 67888888875 56663
Q ss_pred CceeEEEEeeeCCC-eEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhc
Q 041144 108 GFAWELISVYSGPP-MVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLF 172 (201)
Q Consensus 108 Gf~wEVleV~sgpp-~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~ 172 (201)
.+.+++.+++++++ .|+..|+. |++. +|+.+++.+ ||||+++|.|+|+..+++||-
T Consensus 92 ~~~~~i~~~~~~gd~~v~~~~~~-~~~~--------~G~~~~~~~~~~~~~~dGkI~~~~~~~D~~~~~~a~~ 155 (156)
T 1tuh_A 92 TFKAVLLHVLKSDDGRVIGIHRN-TAER--------GGKRLDVGCCIVFEFKNGRVIDGREHFYDLYAWDEFW 155 (156)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEE-EEEE--------TTEEEEEEEEEEEEEETTEEEEEEEEESSHHHHHHHH
T ss_pred ceEEEEEEEEEcCCCEEEEEEEE-EEec--------CCcEEeeeeEEEEEEECCEEEEEEEecCCHHHHHHhh
Confidence 39999999999999 99999998 7763 589888877 999999999999999999984
No 27
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.62 E-value=1.8e-07 Score=69.95 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D 163 (201)
++.+...+.. ..+||+ +.+++.+++++++.|+++|+..| |+++++.| ||||+++|.|+|
T Consensus 63 ~~~i~~~~~~-~~~~~~-~~~~i~~~~~~gd~v~~~~~~~~------------G~~~~~~~~~~~~~~dGkI~e~~~y~~ 128 (129)
T 3fh1_A 63 RQACVQLWSA-IATQPG-TRFDLEETFVAGDRATIRWRYWM------------ADGNSVRGVNLMRVQDGRIVEAMGYVK 128 (129)
T ss_dssp HHHHHHHHHH-HHHCTT-CEEEEEEEEEETTEEEEEEEEEC------------TTSCEEEEEEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHHHHH-HhcCCC-ceEEEeEEEEcCCEEEEEEEEEC------------CCeeEEeceEEEEEcCCEEEEEEEEEc
Confidence 7788888888 889999 99999999999999999998855 77888887 999999999987
No 28
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=98.55 E-value=9.1e-08 Score=74.73 Aligned_cols=124 Identities=10% Similarity=0.026 Sum_probs=85.6
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCC
Q 041144 27 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFP 106 (201)
Q Consensus 27 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFP 106 (201)
-+..++|+.+...| -+-|++.+..+-.+...+...+.++ |.=..+-+ ++.+......+..+||
T Consensus 23 ~~~~~~v~~~~~a~-----~~~D~~~l~~l~a~D~v~~~P~~~~---------g~~~~~~G---~~ai~~~~~~~~~~~~ 85 (163)
T 1z1s_A 23 MNAKEILVHSLRLL-----ENGDARGWCDLFHPEGVLEFPYAPP---------GWKTRFEG---RETIWAHMRLFPEHLT 85 (163)
T ss_dssp CCHHHHHHHHHHHH-----HTTCHHHHHHTEEEEEEEECSSCCT---------TSCCEEES---HHHHHHTTTTGGGTEE
T ss_pred hhHHHHHHHHHHHH-----HCCCHHHHHHHCCCCEEEECcCCCC---------CCCcccCC---HHHHHHHHHHHHHhCc
Confidence 34667777777655 3457777777766666665433210 00000112 6777777777788888
Q ss_pred CCceeEE--EEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCCCC
Q 041144 107 RGFAWEL--ISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKGPV 176 (201)
Q Consensus 107 dGf~wEV--leV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~~~ 176 (201)
+ + ++. ..+.++++.|+..|+..|++ ++||+.+++.| ||||++++.|+|+..+++||+.-+.
T Consensus 86 ~-~-~~~~~~~~~~~g~~vv~~~~~~g~~-------~~tG~~~~~~~~~v~~v~dGkI~~~~~y~D~~~~~~~lg~lp~ 155 (163)
T 1z1s_A 86 V-R-FTDVQFYETADPDLAIGEFHGDGVA-------TVSGGKLAQDYISVLRTRDGQILLYRDFWNPLRHLEALGGVEA 155 (163)
T ss_dssp E-E-ECCCEEECCSSTTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEEETTEEEEEEEEECHHHHHHHHC----
T ss_pred c-c-eeeeEEEEEeCCCEEEEEEEEEEEE-------eCCCCEEccceEEEEEecCCEEEEEEeecCHHHHHHHhcccHH
Confidence 7 5 432 23448999999999999884 68999999888 9999999999999999999997554
No 29
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=98.55 E-value=7.1e-07 Score=74.30 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEee--eCCCeEEEEEEEEeeeeccccccCCCCCE---EEEEe-------ceEEEEE
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVY--SGPPMVAYKFKHWGYFEGPFQGHAPTGEM---VEFLW-------DWDYEDV 158 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~--sgpp~VafkwRhwGt~~G~F~G~~PTG~~---Vei~G-------d~KI~e~ 158 (201)
++.+...+..+..+||+ +.|..+.++ ++|+.|++.++..|+ +.+||+. ++... ||||++.
T Consensus 87 Reai~~~~~~~~~~~~d-~~~~~~~v~~taDpd~VvvE~~~~Gt-------v~~TGkp~~~Y~~~yi~V~rVrDGKIv~~ 158 (185)
T 3jum_A 87 REKLGEHAVWSLQCFPD-WVWTDIQIFETQDPNWFWVECRGEGA-------IVFPGYPRGQYRNHFLHSFRFENGLIKEQ 158 (185)
T ss_dssp HHHHHHHHHHHHHHSTT-CEEEEEEEECCSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHhhCCC-CeeeEEEEEEecCCCEEEEEEEEEEE-------EcCCCCccceEEEeEEEEEEEECCEEEEE
Confidence 88999999999999999 999998885 589999999998877 8899988 65554 9999999
Q ss_pred EeeeChHHHHHhhcCC
Q 041144 159 EIYYHPAELFAGLFKG 174 (201)
Q Consensus 159 w~~~D~~~ll~qL~~~ 174 (201)
+-|+|++.++++|+..
T Consensus 159 ReY~Dpl~~~~alG~~ 174 (185)
T 3jum_A 159 REFMNPCEQFRSLGIE 174 (185)
T ss_dssp EEEECHHHHHHHTTCC
T ss_pred EEecCHHHHHHHhCCC
Confidence 9999999999999764
No 30
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.53 E-value=4.1e-07 Score=66.68 Aligned_cols=62 Identities=15% Similarity=0.028 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCC-CCC----EEEEEe-----ceEEEEEEe
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAP-TGE----MVEFLW-----DWDYEDVEI 160 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~P-TG~----~Vei~G-----d~KI~e~w~ 160 (201)
++.|...+..+..+||+ +.++++.++++||.|+++++..|+ |+ +|+ .+.+.. ||||+|+|.
T Consensus 45 ~~~~~~~~~~~~~~~p~-~~~~i~~~~~~Gd~V~~~~~~~~~--------~~~~G~~~~~~~~~~~ifr~~dGkI~e~W~ 115 (117)
T 3ff2_A 45 KEGTRSGLAAAFARWPQ-NHAEIKDAQQVGTYVLMREHVTRG--------PATDGSPLVEPFDVVAVYSFEGDKCSRVEF 115 (117)
T ss_dssp HHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEECC--------SCSSSCCCCCCEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEec--------CCCCCCcccccEEEEEEEEEECCEEEEEEE
Confidence 88999999999999999 999999999999999999988775 22 353 233323 999999997
Q ss_pred e
Q 041144 161 Y 161 (201)
Q Consensus 161 ~ 161 (201)
.
T Consensus 116 ~ 116 (117)
T 3ff2_A 116 I 116 (117)
T ss_dssp E
T ss_pred e
Confidence 5
No 31
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=98.52 E-value=1.1e-07 Score=67.86 Aligned_cols=68 Identities=12% Similarity=-0.001 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELI-SVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIY 161 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVl-eV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~ 161 (201)
++.+......+..+||+ +++. +++.+++.|++.|+..|++ +|+.+.+.+ +|||+++|.|
T Consensus 48 ~~~i~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~dGkI~~~~~~ 115 (125)
T 1ohp_A 48 TAAIREFYANSLKLPLA---VELTQEVRAVANEAAFAFIVSFEY---------QGRKTVVAPIDHFRFNGAGKVVSMRAL 115 (125)
T ss_dssp HHHHHHHHHHHTSSCCE---EEECSCCEEETTEEEEEEEEEEEE---------TTEEEEECCEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHhcccCce---EEEeeeEEEeCCEEEEEEEEEEEe---------cCceEEEEEEEEEEECCCCcEEEEEEE
Confidence 67777777777777873 5688 9999999999999988876 566665555 7999999999
Q ss_pred eChHHHHHh
Q 041144 162 YHPAELFAG 170 (201)
Q Consensus 162 ~D~~~ll~q 170 (201)
+|+..|++|
T Consensus 116 ~d~~~l~~Q 124 (125)
T 1ohp_A 116 FGEKNIHAG 124 (125)
T ss_dssp CCGGGEEEC
T ss_pred EChhhhhcC
Confidence 999999887
No 32
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=98.49 E-value=3.8e-07 Score=69.54 Aligned_cols=113 Identities=11% Similarity=0.094 Sum_probs=81.5
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCC
Q 041144 29 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRG 108 (201)
Q Consensus 29 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdG 108 (201)
-.++|+.++..| -.-|++.+.++-.+.+.+..-|++ ++.+ ++.+......+..+| +
T Consensus 17 ~~~~v~~f~~a~-----~~gD~~~l~~l~a~D~v~~~~~~~--------------~~~G---~~~i~~~~~~~~~~~-~- 72 (149)
T 2bng_A 17 AIRAVEAFLNAL-----QNEDFDTVDAALGDDLVYENVGFS--------------RIRG---GRRTATLLRRMQGRV-G- 72 (149)
T ss_dssp HHHHHHHHHHHH-----HHTCHHHHHHHEEEEEEEEETTTE--------------EEEC---HHHHHHHHHTTTTTC-E-
T ss_pred HHHHHHHHHHHH-----hcCCHHHHHHHcCCCEEEEeCCCC--------------CccC---HHHHHHHHHHHHhhc-C-
Confidence 345666666544 445677777776666666522221 1222 677777777777777 5
Q ss_pred ceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChHHHHHhhcCC
Q 041144 109 FAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPAELFAGLFKG 174 (201)
Q Consensus 109 f~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~~ll~qL~~~ 174 (201)
+.+++.+++++|+.|+..++..+++ +|+++.+.+ ||||++++.|+|+..|++||..+
T Consensus 73 ~~~~i~~~~~~g~~vv~~~~~~~~~---------~G~~~~~~~~~~~~v~dGkI~~~~~y~D~~~l~~~l~~~ 136 (149)
T 2bng_A 73 FEVKIHRIGADGAAVLTERTDALII---------GPLRVQFWVCGVFEVDDGRITLWRDYFDVYDMFKGLLRG 136 (149)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEE---------TTEEEEEEEEEEEEEETTEEEEEEEECCHHHHHHHHHHH
T ss_pred cEEEEEEEEEeCCEEEEEEEEEEEE---------CCeEEEEEEEEEEEEECCEEEEEEEEcChHHHHHHHHHH
Confidence 8999999999999998877644443 477777766 99999999999999999999765
No 33
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=98.47 E-value=1.9e-07 Score=68.30 Aligned_cols=68 Identities=12% Similarity=-0.077 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeE-EEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMV-AYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIY 161 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~V-afkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~ 161 (201)
++.+......+..+||+ +.+++.+++..++.+ ++.|+..|+ ++|+++.+.| +|||+++|.|
T Consensus 50 ~~~i~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~---------~~G~~~~~~~~~~~~~~~dGkI~~~~~~ 119 (131)
T 1oh0_A 50 REQIAAFYRQGLGGGKV-RACLTGPVRASHNGCGAMPFRVEMV---------WNGQPCALDVIDVMRFDEHGRIQTMQAY 119 (131)
T ss_dssp HHHHHHHHHHHHSSSCC-EEEESSCCEECSSSEEEEEEEEEEE---------SSSSEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhccce-eEeecceEEECCCeEEEEEEEEEEE---------eCCcEEEEEEEEEEEECCCCcEEhHHhh
Confidence 77888888889999998 999999999999999 999998763 4788888877 8999999999
Q ss_pred eChHHHH
Q 041144 162 YHPAELF 168 (201)
Q Consensus 162 ~D~~~ll 168 (201)
+|+..|+
T Consensus 120 ~d~~~l~ 126 (131)
T 1oh0_A 120 WSEVNLS 126 (131)
T ss_dssp CCGGGEE
T ss_pred cChhhhh
Confidence 9998875
No 34
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=98.40 E-value=6.9e-07 Score=76.99 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEee--eCCCeEEEEEEEEee--eeccc------cccC----CCCCEEEEEe-----
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVY--SGPPMVAYKFKHWGY--FEGPF------QGHA----PTGEMVEFLW----- 151 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~--sgpp~VafkwRhwGt--~~G~F------~G~~----PTG~~Vei~G----- 151 (201)
++.+...+..+... + -...+.+++ ++|+.++++|+..|+ |+|+| +|+| |+|++|++.|
T Consensus 181 ~~ai~~~~~~~~~~--~-~~~~~~~~~~~~~g~~aa~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~~~ 257 (283)
T 3rga_A 181 LEALRAHATMAVGS--N-VRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIG 257 (283)
T ss_dssp HHHHHHHHHHHHHT--T-CEEEEEEEEECTTSSEEEEEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEEEE
T ss_pred HHHHHHHHHHhhcc--C-cEEEEeeEEecCCCCEEEEEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEEEE
Confidence 66677777666665 3 566677766 679999999999999 88888 7888 8999999999
Q ss_pred ---ceEEEEEEeeeChHHHHHhhcC
Q 041144 152 ---DWDYEDVEIYYHPAELFAGLFK 173 (201)
Q Consensus 152 ---d~KI~e~w~~~D~~~ll~qL~~ 173 (201)
+|||++++.|||+.. +.|+.+
T Consensus 258 ~~~dGkI~~~r~yw~~~d-~~~~~~ 281 (283)
T 3rga_A 258 VDADGLIDEMRAYWGATD-VSLLDP 281 (283)
T ss_dssp ECTTSCEEEEEEECCGGG-EEEECC
T ss_pred ECCCccEEEEEEeeChhh-ccCCCC
Confidence 699999999999999 777654
No 35
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=98.37 E-value=4.4e-06 Score=68.34 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEee--eCCCeEEEEEEEEeeeeccccccCCCCCE---EEEEe-------ceEEEEE
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVY--SGPPMVAYKFKHWGYFEGPFQGHAPTGEM---VEFLW-------DWDYEDV 158 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~--sgpp~VafkwRhwGt~~G~F~G~~PTG~~---Vei~G-------d~KI~e~ 158 (201)
++.+......+..+||+ +.|..+.++ ++|++|++.|+..|+ +.+||+. .+... ||||++.
T Consensus 65 re~l~~~~~~~~~~~~~-~~~~~~~i~~t~Dpd~vvvE~~~~g~-------i~~tG~~~~~y~~~yi~v~~vrdGkI~~~ 136 (163)
T 3ff0_A 65 KDKLAEHAVWSLKCFPD-WEWYNIKVFETDDPNHFWVECDGHGK-------ILFPGYPEGYYENHFLHSFELDDGKIKRN 136 (163)
T ss_dssp HHHHHHHHHHHHHHSTT-CEEEEEEEEEBSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHhhCCC-ceeeeEEEEEcCCCCEEEEEEEEEEE-------EcCCCcccccEEEeEEEEEEEeCCEEEEE
Confidence 78888888899999999 999988886 578899999999888 5889999 77666 9999999
Q ss_pred EeeeChHHHHHhhcCC
Q 041144 159 EIYYHPAELFAGLFKG 174 (201)
Q Consensus 159 w~~~D~~~ll~qL~~~ 174 (201)
.-|+|++.++++|+..
T Consensus 137 ReY~dp~~~~~alG~~ 152 (163)
T 3ff0_A 137 REFMNVFQQLRALSIP 152 (163)
T ss_dssp EEEECHHHHHHHTTCC
T ss_pred EeecCHHHHHHHhCCC
Confidence 9999999999999764
No 36
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=98.21 E-value=2.2e-05 Score=57.63 Aligned_cols=101 Identities=7% Similarity=0.003 Sum_probs=76.8
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCc
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGF 109 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf 109 (201)
+++|+++..-| -.-|.+...+...+-+....+|+.. +.+ ++.|.+....+++.+|+ +
T Consensus 3 ~~~v~~~~~a~-----~~gD~~~~~~~ladDv~w~~~g~~~--------------~~G---~~~~~~~~~~~~~~~~~-~ 59 (112)
T 3f14_A 3 ETTHYSIAQHF-----SSGDFPAVYACFNDIIEWNIIGNQV--------------VKG---KADVIDFCNKMLPEMKG-A 59 (112)
T ss_dssp HHHHHHHHHHH-----HTTCGGGTGGGEEEEEEEEETTTEE--------------EES---HHHHHHHHHHHHHHHHT-S
T ss_pred hHHHHHHHHHH-----HcCCHHHHHHhcCCceEEEEcCCcc--------------Eec---HHHHHHHHHHHHhhcCC-c
Confidence 45566665444 3556666767666777766666532 112 78888888999999996 9
Q ss_pred eeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEee
Q 041144 110 AWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIY 161 (201)
Q Consensus 110 ~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~ 161 (201)
.++|.+++++|+.|+..++..| ..++|+.+++.. ||||++++-|
T Consensus 60 ~~~i~~~i~~Gd~Vvv~~~~~~--------~~~~g~~~~~~~~~vf~~~dGkI~e~~~Y 110 (112)
T 3f14_A 60 VLTNDNVIQNENQIVIEGKCRY--------FDAEGKEAFVSYCDIYRFENDTIKTITSY 110 (112)
T ss_dssp EEEEEEEEECSSEEEEEEEEEE--------ECTTSCEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEEeCCEEEEEEEEEE--------EeCCCCEEEEEEEEEEEEeCCEEEEEEEE
Confidence 9999999999999999987754 468999987766 9999999877
No 37
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=97.93 E-value=3.3e-05 Score=62.41 Aligned_cols=96 Identities=5% Similarity=0.003 Sum_probs=68.9
Q ss_pred ccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCceeEEEEeeeC--CC
Q 041144 44 LSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGFAWELISVYSG--PP 121 (201)
Q Consensus 44 ~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf~wEVleV~sg--pp 121 (201)
+...-|++.+.+.-.+-..+-.+++.+ . ..+.+ ++.+......+.++| + ..|++..++.. ++
T Consensus 22 A~n~gD~d~l~~l~aeD~v~~~p~~~p--~---------~~~~G---reai~~~f~~~~~~~-d-~~~~~e~i~v~~dG~ 85 (156)
T 3g16_A 22 GCNEADEAKMIACFVPEAVHYFPAGMY--G---------GAFRG---AAQIAHRWRTAVETL-G-SYWTIDALVIDAETA 85 (156)
T ss_dssp HHHTTCHHHHHTTEEEEEEEECBTTST--T---------SCEES---HHHHHHHHHHHHHHH-C-EEEEEEEEEEETTTT
T ss_pred HHHcCCHHHHHHhcCCCEEEecCCCCC--C---------CCccC---HHHHHHHHHHHHhhc-C-ceEEEEEEEEecCCC
Confidence 444666666666655555555443211 0 01112 788888888888887 5 89999999999 99
Q ss_pred eEEEEEEEEeeeeccccccCCCCCEEEEEe---------ceEEEEEEeeeChHH
Q 041144 122 MVAYKFKHWGYFEGPFQGHAPTGEMVEFLW---------DWDYEDVEIYYHPAE 166 (201)
Q Consensus 122 ~VafkwRhwGt~~G~F~G~~PTG~~Vei~G---------d~KI~e~w~~~D~~~ 166 (201)
+++..|+++||..| +++.| ||||++++.|||...
T Consensus 86 ~av~Ewt~~~T~~g-----------~~~~~~~~f~f~~~DGKI~~~r~Y~~~~~ 128 (156)
T 3g16_A 86 EAAIEWTHFKTNQD-----------KVLRGAECVEFDRASGLIREIRAFYASPQ 128 (156)
T ss_dssp EEEEEEEEEEGGGT-----------EEEEEEEEEEEETTTTEEEEEEEEESCCC
T ss_pred EEEEEEEEEEeCCC-----------eeEecceEEEEEecCCEEEEEeeecCCcc
Confidence 99999999999776 33333 899999999999754
No 38
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=97.77 E-value=0.00012 Score=53.82 Aligned_cols=60 Identities=18% Similarity=0.281 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEE-EEEe---ceEEEEEEeeeC
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMV-EFLW---DWDYEDVEIYYH 163 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~V-ei~G---d~KI~e~w~~~D 163 (201)
++.+......+.++||+ +.+++++++.+++.+++.|++ ++|++| ++.- ||||+++..||+
T Consensus 58 ~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------~~G~~~~~~~~~~~dGkI~~~~~~~~ 121 (122)
T 3h3h_A 58 KEQVGAYWREALRMIPD-LHFEWIATLAGVDSVAIHYRG------------AKGRLALEVFHFGPDRRVVKALAHYA 121 (122)
T ss_dssp HHHHHHHHHHHHHHCTT-CCCEEEEEEECSSEEEEEEEC------------GGGCEEEEEEEECTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCC-cEEEEEEEEecCcEEEEEEEC------------CCCCEEEEEEEECCCCcEEEEEEEec
Confidence 78888899999999999 999999999999999998873 345554 3333 899999999997
No 39
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=97.75 E-value=0.00016 Score=53.96 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELI-SVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIY 161 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVl-eV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~ 161 (201)
++.+...+..+..+||+ +.+++. ++...++.+.|+|+.. +++|+ +.+.| +|||++++.|
T Consensus 48 ~~ai~~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~w~~~----------~~~g~-~~~~G~d~l~~~~dGrI~~~~~f 115 (121)
T 3dxo_A 48 QQGIAAMIEAARQKFPG-YRFVLAGTPDGHGNFTRFSWRLI----------SPDGD-DVAGGTDVVSLNTEGRIDNVVGF 115 (121)
T ss_dssp HHHHHHHHHHHHHHSTT-CEEEEEEEEEEETTEEEEEEEEE----------CTTSC-EEEEEEEEEEECTTSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCC-cEEEEccCcceeCCEEEEEEEEe----------CCCCC-ceeeEEEEEEECCCCCEEEEEEe
Confidence 88899999999999998 999998 8899999999999863 45564 56778 8999999999
Q ss_pred eChH
Q 041144 162 YHPA 165 (201)
Q Consensus 162 ~D~~ 165 (201)
+|++
T Consensus 116 ~d~~ 119 (121)
T 3dxo_A 116 LDGA 119 (121)
T ss_dssp EEC-
T ss_pred cCCC
Confidence 9975
No 40
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=97.67 E-value=0.0005 Score=52.35 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=71.5
Q ss_pred cCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCceeE-EEEeeeCCCeEEE
Q 041144 47 KTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGFAWE-LISVYSGPPMVAY 125 (201)
Q Consensus 47 K~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf~wE-VleV~sgpp~Vaf 125 (201)
.-|.+.+..+-.+-....++|++ +. |.| .+ ++.+......+.+.|+.++..+ |..++++|+.|++
T Consensus 27 ~gD~~~l~~lla~D~v~~~pg~~-------~~-g~~---~G---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~G~~vvv 92 (134)
T 3dmc_A 27 TGEWQKFLDMLTEDFTFWFPMGE-------FH-GLN---VG---KERAKEFFTYVSESFHTGIQISSLDRVTSNETTVVF 92 (134)
T ss_dssp HSCCHHHHTTEEEEEEEEESSGG-------GB-EEE---ES---HHHHHHHHHHHHHTCTTCEEEEEEEEEEECSSEEEE
T ss_pred cCCHHHHHHHcCCCEEEEecCCC-------CC-ccc---hh---HHHHHHHHHHHHHhhcCCceeEEEEEEEecCCEEEE
Confidence 45555666666666777777653 11 211 12 7788888888999999669999 9999999999999
Q ss_pred EEEEEeeeeccccccCCCCCEEEEEe-------ceEEEEEEeeeChH
Q 041144 126 KFKHWGYFEGPFQGHAPTGEMVEFLW-------DWDYEDVEIYYHPA 165 (201)
Q Consensus 126 kwRhwGt~~G~F~G~~PTG~~Vei~G-------d~KI~e~w~~~D~~ 165 (201)
.|+..|+.. |+.++... ||||+++.-|||..
T Consensus 93 e~~~~g~~~---------g~~y~~~~~~~f~v~dGkI~~~r~Y~d~~ 130 (134)
T 3dmc_A 93 EFRDEGLFL---------GKPYKNRVAVSFDVRGDKICSYREYFGSD 130 (134)
T ss_dssp EEEEEEEET---------TEEEEEEEEEEEEEETTEEEEEEEEECSC
T ss_pred EEEEEEEEc---------CcEeeccEEEEEEEECCEEEEEEEEECCC
Confidence 999888773 35555443 99999999999953
No 41
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=97.47 E-value=0.00016 Score=62.14 Aligned_cols=69 Identities=9% Similarity=-0.109 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEee--eCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEe
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVY--SGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEI 160 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~--sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~ 160 (201)
++.+...+..+...|.. .++.+++ ++|+.|+++|+..+++. -.|+|++|++.| +|||++++.
T Consensus 49 r~ai~~~~~~~~~~~~~---~~~~~~~~~~~G~~v~~~~~~~~~~~-----g~~~g~~v~~~gi~v~r~d~dGkI~~~rd 120 (283)
T 3rga_A 49 RAALAARLAPALRGAVH---EEPGRPYAAHDGTSVVLPATVTVGAP-----GAPPQRRGRTRVMGVIEVGEDGLIREMRV 120 (283)
T ss_dssp HHHHHHHHHHHHHTTCE---EEECCCBCCSSSSEEEEEEEEEECST-----TCCGGGCEEEEEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHHhhcCc---eEEEEEEeeeeCCEEEEEEEEEEEeC-----CCCccceEEEEEEEEEEECCCCcEEEEEE
Confidence 77788777777777754 5678887 89999999999988753 378999999999 799999999
Q ss_pred eeChHHH
Q 041144 161 YYHPAEL 167 (201)
Q Consensus 161 ~~D~~~l 167 (201)
|||+..+
T Consensus 121 yw~~~d~ 127 (283)
T 3rga_A 121 MWGVTDS 127 (283)
T ss_dssp ECCGGGB
T ss_pred EECcccc
Confidence 9999765
No 42
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=97.02 E-value=0.0037 Score=48.26 Aligned_cols=110 Identities=14% Similarity=0.181 Sum_probs=71.1
Q ss_pred HHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCCh--HHHHHHHHHHHHHhCCCC
Q 041144 31 ETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSM--EETFKSSHDAFRSAFPRG 108 (201)
Q Consensus 31 ~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~--~e~f~~s~~~f~~AFPdG 108 (201)
+-++.++..|- ++.-+-|++.+..+-.+...+.- |...... ++.+...+..+.+.||+
T Consensus 9 ~~~~~~~~~~~-~a~~~~D~~~l~~l~a~D~v~~~------------------P~~~~~~~G~~~v~~~~~~~~~~~~~- 68 (143)
T 3mso_A 9 ANAAATLAEWH-GLIARRDLSGLPRLLHPDAVFRS------------------PMAHKPYAGAPVVSMILNTVLTVFED- 68 (143)
T ss_dssp HHHHHHHHHHH-HHHHTTCCTTGGGGEEEEEEEEC------------------SSCSSCEESHHHHHHHHHHHHHHCEE-
T ss_pred HHHHHHHHHHH-HHHhcCCHHHHHHhcCCCEEEEC------------------CCCCCCccCHHHHHHHHHHHHhhCCc-
Confidence 33444555543 34445667776666666555553 2211111 78888888888899996
Q ss_pred ceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEeeeChHHHHHhhcC
Q 041144 109 FAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIYYHPAELFAGLFK 173 (201)
Q Consensus 109 f~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~~D~~~ll~qL~~ 173 (201)
|.++..-+..++..++..|+.. . | |+ ++.| +|||++++++.||+..++.|+.
T Consensus 69 f~~~~~~~~~dg~~~~~~f~~~--~-~--------g~--~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~ 128 (143)
T 3mso_A 69 FAYHRQLASADGRSVVLEFSAR--V-G--------ER--ELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGE 128 (143)
T ss_dssp EEEEEEEEETTSSEEEEEEEEE--E-T--------TE--EEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHH
T ss_pred eEEEEEEEccCCCEEEEEEEEE--E-C--------CE--EEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHH
Confidence 6554333333788888888753 2 1 44 4445 7999999999999999988865
No 43
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=96.52 E-value=0.011 Score=43.74 Aligned_cols=62 Identities=11% Similarity=0.223 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-----ceEEEEEEeeeChH
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-----DWDYEDVEIYYHPA 165 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-----d~KI~e~w~~~D~~ 165 (201)
++.+...+. .+++ .+++..++..|+.+++.|+.. ++|+.+.... ||||++++.++||.
T Consensus 47 ~~~v~~~~~---~~~~---~~~~~~~~~~G~~v~~~~~~~-----------~~g~~~~~~~~~~v~dGrI~~i~~~~dp~ 109 (114)
T 3f40_A 47 SERYMNDME---KMKF---KYVVHKMFEEGNDVCLIYDIN-----------MNGKTIAASGLYHLEKGEITSLHVYFDPR 109 (114)
T ss_dssp HHHHHHHHH---HHCC---EEEEEEEEEETTEEEEEEEEE-----------ETTEEEEEEEEEEEETTEEEEEEEECCCG
T ss_pred HHHHHHHHH---HHHh---heEEEEEEecCCcEEEEEEEe-----------cCCcEeecceEEEEcCCeEEEEEEEECCh
Confidence 455554443 3333 678999999999998876543 2444433222 99999999999999
Q ss_pred HHHH
Q 041144 166 ELFA 169 (201)
Q Consensus 166 ~ll~ 169 (201)
.||.
T Consensus 110 ~l~~ 113 (114)
T 3f40_A 110 PLFE 113 (114)
T ss_dssp GGGC
T ss_pred hhcc
Confidence 8874
No 44
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=96.45 E-value=0.015 Score=45.64 Aligned_cols=114 Identities=13% Similarity=0.162 Sum_probs=79.1
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCC
Q 041144 27 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFP 106 (201)
Q Consensus 27 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFP 106 (201)
++|.+.++.+++.|- ++.-+-|++.+..+-.+-..+.- |.. .+++-+ ++.+...+..+.+.||
T Consensus 16 ~~~~~~~~~~l~~f~-~a~~~gD~~aL~~LlA~Dvv~~~---P~~----------~~~~~G---~~av~~~~~~~~~~~~ 78 (148)
T 3f8x_A 16 TSPNAAVQSGLQEWH-RIIAEADWERLPDLLAEDVVFSN---PST----------FDPYHG---KGPLMVILPAVFSVLE 78 (148)
T ss_dssp -CCCHHHHHHHHHHH-HHHHHTCGGGSGGGEEEEEEEEC---SSC----------SSCEES---HHHHHHHHHHHHHHCE
T ss_pred cchhHHHHHHHHHHH-HHHHcCCHHHHHHHhCCCEEEEC---CCC----------CCCcCC---HHHHHHHHHHHHhhCC
Confidence 467777888888774 46666788888777766666654 100 022222 7888888888888898
Q ss_pred CCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEeeeChHHHHHhhcC
Q 041144 107 RGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIYYHPAELFAGLFK 173 (201)
Q Consensus 107 dGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~~D~~~ll~qL~~ 173 (201)
+ |. +...+..++..++.|+.+. | | +++.| +|||++++++++|+..+++|+.
T Consensus 79 ~-f~--~~~~~~~g~~~~l~f~~~~---~--------g--~~v~Gvdvl~~d~dGkI~~~~~~~~P~~~~~~l~~ 137 (148)
T 3f8x_A 79 N-FQ--YARHFSSKSGYVLEFNANM---G--------D--ELLTGVDLIEFNDAGKITDLVVMMRPASVVIDLSV 137 (148)
T ss_dssp E-EE--EEEEEECSSEEEEEEEEEE---T--------T--EEEEEEEEEEECTTSCEEEEEEEEECHHHHHHHHH
T ss_pred C-EE--EEEEEEeCCeEEEEEEEEE---C--------C--EEEEEEEEEEECCCCcEEEEEEEEchHHHHHHHHH
Confidence 7 75 4556666777788888541 1 2 23444 7999999999999999999965
No 45
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=96.04 E-value=0.034 Score=41.71 Aligned_cols=53 Identities=15% Similarity=0.150 Sum_probs=39.9
Q ss_pred HHHHhCCCCce-eEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEE---EEEe--ceEEEEEEeeeC
Q 041144 100 AFRSAFPRGFA-WELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMV---EFLW--DWDYEDVEIYYH 163 (201)
Q Consensus 100 ~f~~AFPdGf~-wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~V---ei~G--d~KI~e~w~~~D 163 (201)
.|...||+... ++|+.+.++|+.|++.++... +|..+ .|.= ||||+++..|||
T Consensus 53 ~~~~~~~~~~~~~~i~~~~a~G~~vv~~~~~~~-----------~g~~~~~~~v~~v~dGkI~~~~~y~~ 111 (128)
T 3en8_A 53 ALRSHHPGKPAGFEVRRIQGEGNLWITEYSISY-----------NGRPAYTVSIMEFRNGKVVHETQYFS 111 (128)
T ss_dssp HHHHHTTCSCSEEEEEEEEEETTEEEEEEEEEE-----------TTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHCCCCCcceEEEEEEECCCEEEEEEEEec-----------CCEEEEEEEEEEEcCCEEEEEEEeCC
Confidence 36778998434 899999999999999998742 22222 2222 999999999999
No 46
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=96.00 E-value=0.011 Score=47.46 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe--------ceEEEEEEeee
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW--------DWDYEDVEIYY 162 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G--------d~KI~e~w~~~ 162 (201)
++.+......+.+.||+ |.++. .+.+++.+++.|+... | |. ++.| ||||+++++..
T Consensus 61 r~av~~~l~~~~~~~~d-f~~~~--~~v~G~~avl~f~~~~---~--------g~--~v~gvd~~~fdedGkI~e~~vm~ 124 (155)
T 3flj_A 61 RDPVAAVLGHVGQVFSE-FRYRR--IMGEGKDWALEFQCKV---G--------EL--DAVGVDLITLNEGGLIQDFEVVM 124 (155)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEE--EEEETTEEEEEEEEEE---T--------TE--EEEEEEEEEECTTSSEEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCC-cEEEE--EEEcCCEEEEEEEEEE---C--------CE--EEEEEEEEEEcCCCCEEEEEEEE
Confidence 77888888888889997 86654 4468889999988542 1 33 3344 89999999999
Q ss_pred ChHHHHHhhcC
Q 041144 163 HPAELFAGLFK 173 (201)
Q Consensus 163 D~~~ll~qL~~ 173 (201)
+|+..+++|+.
T Consensus 125 rP~k~l~al~~ 135 (155)
T 3flj_A 125 RPYKTVGALRD 135 (155)
T ss_dssp ECHHHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 99999999975
No 47
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=94.71 E-value=0.26 Score=34.83 Aligned_cols=100 Identities=5% Similarity=-0.043 Sum_probs=64.9
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHH-hC
Q 041144 27 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRS-AF 105 (201)
Q Consensus 27 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~-AF 105 (201)
.+|++-|+.|+..|. ++.-.-|++.+.++=.+...+.-.++..+ .+ ++.+...+..+.. .+
T Consensus 2 ~~~~~~I~~~~~~~~-~a~~~~D~~~~~~l~a~Da~~~~~~~~~~--------------~G---~~~i~~~~~~~~~~~~ 63 (129)
T 3hx8_A 2 QSAKEAIEAANADFV-KAYNSKDAAGVASKYMDDAAAFPPDMARV--------------DG---RQNIQKLWQGAMDMGI 63 (129)
T ss_dssp CCHHHHHHHHHHHHH-HHHHTTCHHHHHTTEEEEEEEECTTSCCE--------------ES---HHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHH-HHHHcCCHHHHHHhhCCCeEEeCCCCCcc--------------cC---HHHHHHHHHHHHhCCC
Confidence 367788888888875 46566777777766555554422221111 11 4455555544333 35
Q ss_pred CCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe
Q 041144 106 PRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW 151 (201)
Q Consensus 106 PdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G 151 (201)
++ +.+++++|...++.++..++..++.. .++|+.+.+.|
T Consensus 64 ~~-~~~~~~~v~~~gd~A~~~~~~~~~~~------~~~G~~~~~~g 102 (129)
T 3hx8_A 64 SE-LKLTTLDVQESGDFAFESGSFSLKAP------GKDSKLVDAAG 102 (129)
T ss_dssp EE-EEEEEEEEEEETTEEEEEEEEEEEEE------CTTSCEEEEEE
T ss_pred ce-EEEEEEEEEcCCCEEEEEEEEEEEee------CCCCCeeeeeE
Confidence 66 88899999999999999888776642 57898887666
No 48
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=94.61 E-value=0.16 Score=39.89 Aligned_cols=68 Identities=12% Similarity=0.211 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEE--EEEEeeeeccccccCCCCCEEEEEe--ceEEEEEEeeeChHH
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYK--FKHWGYFEGPFQGHAPTGEMVEFLW--DWDYEDVEIYYHPAE 166 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~Vafk--wRhwGt~~G~F~G~~PTG~~Vei~G--d~KI~e~w~~~D~~~ 166 (201)
++.|.+.+..+-.++|+||..+++.++++++.|+-- |-| +....-+.+.+.- ++||++..-|-|.-+
T Consensus 45 R~~~r~a~~~L~~~lP~g~~It~lR~i~ggn~VVSeve~~~---------~~~~~~~~~~lf~f~~g~I~~er~~~~~~~ 115 (120)
T 3lyg_A 45 RQAFRSALDNLGEILPPGFEITGLRQLEGENEIVSIVEWKS---------DKMIASQLSVLFKFEGDQIYEERWFVDTEQ 115 (120)
T ss_dssp HHHHHHHHTTHHHHSCTTCEEEEEEEEECSSEEEEEEEEEE---------TTEEEEEEEEEEEEETTEEEEEEEECCHHH
T ss_pred HHHHHHHHHHHHhhCCCCceeeeEEEecCCCEEEEEEEEcC---------CCeeeEEEEEEEEEECCEEEEEEEEEeHHH
Confidence 899999999999999999999999999999999864 444 1111122233333 999999988888754
Q ss_pred H
Q 041144 167 L 167 (201)
Q Consensus 167 l 167 (201)
-
T Consensus 116 ~ 116 (120)
T 3lyg_A 116 W 116 (120)
T ss_dssp H
T ss_pred h
Confidence 3
No 49
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=93.43 E-value=0.14 Score=38.56 Aligned_cols=45 Identities=7% Similarity=-0.020 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeee---CCCeEEEEEEEEeeeecc
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYS---GPPMVAYKFKHWGYFEGP 136 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~s---gpp~VafkwRhwGt~~G~ 136 (201)
.+.+......++.+||+ |..+|.++.. +++.++.+|+-|+++.|.
T Consensus 52 ~~~~~~~~~~~~g~~pg-l~i~i~~l~~~~~~~d~~vv~y~~~~~~~~~ 99 (128)
T 1tp6_A 52 KTALGELFRSKGGTRPG-LRIEIDGESLLASGVDGATLAYREIQSDAAG 99 (128)
T ss_dssp HHHHHHHHHHHTTCSTT-CEEEEEEEEEEEEETTEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHhhCCCCC-eEEEEEEEEEEeecCCEEEEEEEEEeccCCc
Confidence 67778888889999996 9999999999 999999999999998776
No 50
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=85.09 E-value=4.6 Score=28.51 Aligned_cols=88 Identities=9% Similarity=0.084 Sum_probs=59.6
Q ss_pred HHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCce
Q 041144 31 ETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGFA 110 (201)
Q Consensus 31 ~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf~ 110 (201)
.-|+.|+..| +++...-|++.+..+-.+...+...|+++ +.+ ++.+...+..+...++..+.
T Consensus 11 ~~i~~~~~~~-~~a~~~~D~~~~~~l~a~D~v~~~~~~~~--------------~~G---~~ai~~~~~~~~~~~~~~~~ 72 (135)
T 3d9r_A 11 AVIEAAAIAY-LTAFNRADIPAVIATYTDDGVLMGPGRPA--------------AVG---KDELAEVYLSVFETVGFDMA 72 (135)
T ss_dssp HHHHHHHHHH-HHHHHTTCHHHHHHTEEEEEEEECTTSCC--------------EES---HHHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHH-HHHHhcCCHHHHHHhcCCCEEEECCCCCc--------------ccC---HHHHHHHHHHHHhhcCCcee
Confidence 4466777777 66777788888777765555543322221 112 66777777776666642388
Q ss_pred eEEEEeee-CCCeEEEEEEEEeeeecc
Q 041144 111 WELISVYS-GPPMVAYKFKHWGYFEGP 136 (201)
Q Consensus 111 wEVleV~s-gpp~VafkwRhwGt~~G~ 136 (201)
++++++.. +++.+..+++..++++++
T Consensus 73 ~~~~~i~~~~gd~a~~~~~~~~~~~~~ 99 (135)
T 3d9r_A 73 YEIKEVVQTSADWAFVRSATEGTETNK 99 (135)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEET
T ss_pred EEEEEEEEecCCEEEEEEEEEEEEecC
Confidence 99999877 889999999888887654
No 51
>3gb3_A Killerred; fluorescent protein, genetically encoded photosensitizer, phototoxicity; HET: CRQ; 1.75A {Anthomedusae SP} PDB: 3gl4_A* 4b30_A* 2wiq_A* 2wis_A* 3a8s_A*
Probab=71.40 E-value=6.4 Score=33.90 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=27.2
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
.-|+.|||+|+.||=.-.|.++-.+..+.+..
T Consensus 78 dyFK~sfPeGys~eRt~~fEDGGv~t~~~~is 109 (235)
T 3gb3_A 78 HFAQECFPEGLSIDRTVRFENDGTMTSHHTYE 109 (235)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 35789999999999999999988888777664
No 52
>3ai5_A Yeast enhanced green fluorescent protein, ubiquit; ubiquitin, fusion protein, fluore protein, transcription; HET: CR2; 1.40A {Aequorea victoria} PDB: 3ako_B*
Probab=58.48 E-value=15 Score=32.30 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=27.9
Q ss_pred HHHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 98 HDAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 98 ~~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
.+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 82 ~d~fk~~~p~gy~~~R~~~fedgg~~~~~~~~ 113 (307)
T 3ai5_A 82 HDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (307)
T ss_dssp GCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CChHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 45789999999999999999998888887766
No 53
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=58.29 E-value=68 Score=25.77 Aligned_cols=80 Identities=9% Similarity=0.102 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe-----------ceEEEEEE
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW-----------DWDYEDVE 159 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G-----------d~KI~e~w 159 (201)
.....+..+.+|+-.=. +..-++.+|..|..|+.--- =++.||=.=+---||-|++.- +-|+.|++
T Consensus 63 ~r~Ii~Fl~RaH~gvLe-y~fnieHmfnsGsLVVmiGn--Y~~kGPg~qfgkpGkiId~aiPGVTtlklDm~~~Rv~eh~ 139 (154)
T 3gzb_A 63 GRFIIDFLERAHQGVLE-YDFNIEHMYNAGSLVVMIGN--YHFKGPGEQFGKPGKIIDVAIPAVTSLKLDMLNRRVTEHV 139 (154)
T ss_dssp HHHHHHHHHHHTTTCCC-CEEEEEEEEEETTEEEEEEE--EEEEEEEGGGTEEEEEEEEEEEEEEEEEEETTTTEEEEEE
T ss_pred cHHHHHHHHHHhhhhee-eccChhhhccCCcEEEEEcc--eeecCchHHcCCCCceEEEecCceEEEeecCCccchhhhH
Confidence 66777777777777777 89999999999999954221 125666553344578887654 45999999
Q ss_pred eeeChHHHHHhhcC
Q 041144 160 IYYHPAELFAGLFK 173 (201)
Q Consensus 160 ~~~D~~~ll~qL~~ 173 (201)
.+.|-..|..||..
T Consensus 140 DlmDyqTm~DQl~~ 153 (154)
T 3gzb_A 140 DLIDYQTMSDQLAM 153 (154)
T ss_dssp EEECHHHHHHHHTT
T ss_pred hHHhHHHHHHHhhc
Confidence 99999999999853
No 54
>3evp_A Circular-permutated green fluorescent protein; EGFP, chromophore, luminescence, photoprotein, signaling protein; HET: CRO; 1.45A {Aequorea victoria}
Probab=57.71 E-value=13 Score=32.14 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=28.4
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
+-|+.|||+|+.||=.-.|.++-.+..+.+..
T Consensus 181 DyFKqsfPeGysweRt~~fEDGGv~t~~~~is 212 (243)
T 3evp_A 181 DFFKSAMPEGYIQERTIFFKDDGNYKTRAEVK 212 (243)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEEcCCCEEEEEEEEE
Confidence 56899999999999999999999988887763
No 55
>2zmu_A Fluorescent protein; GFP-like protein, luminescent protein, structural genomics, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: CFY; 1.65A {Fungia concinna} PDB: 2zmw_A* 3mgf_A*
Probab=57.50 E-value=14 Score=31.65 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=26.4
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
-|+.|||+|+.||=.-.|.++-.+..+++.
T Consensus 78 yFK~s~peGysweRt~~fEDGGv~t~~~~i 107 (223)
T 2zmu_A 78 YFKQAFPEGLSWERSLEFEDGGSASVSAHI 107 (223)
T ss_dssp HHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 577899999999988889999888888876
No 56
>2a50_B ASFP595, GFP-like non-fluorescent chromoprotein FP595 CHAI; ASCP, fluorescent protein, photochromic prote reversible photoswitch; HET: NRQ; 1.30A {Anemonia sulcata} PDB: 2a53_B* 2a54_B* 2a56_B* 2a52_B* 3cfa_A* 3cfh_A* 3cff_A*
Probab=56.68 E-value=10 Score=30.96 Aligned_cols=30 Identities=27% Similarity=0.660 Sum_probs=26.5
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 15 yFKqsfpeGysweRt~~fEDGGv~t~~~~i 44 (168)
T 2a50_B 15 YFKQSFPEGFTWERTTTYEDGGFLTAHQDT 44 (168)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCceeEEEEEEECCCcEEEEEEEE
Confidence 478899999999999999999888888776
No 57
>3ako_A Venus; fluorescent protein, GFP; HET: CR2 PE8; 2.10A {Plant transformation vector psiteii-4corganism_taxid}
Probab=54.66 E-value=17 Score=29.97 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=28.6
Q ss_pred HHHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 98 HDAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 98 ~~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
.+-|+.|||.|+.||=.-.|.++-.+..+.+.
T Consensus 100 ~DyFKqsfPeGysweRt~~fEDGGv~ta~~~i 131 (173)
T 3ako_A 100 HDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 131 (173)
T ss_dssp GCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CChHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 35789999999999999999999999888776
No 58
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=52.75 E-value=47 Score=24.87 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=65.1
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCCCCc
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFPRGF 109 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf 109 (201)
|.-++.|+..| .+|..--|++.+.+.-.+.-.+..-|++.. + ++.|..........++-+.
T Consensus 16 e~aI~~l~~~~-~~A~~~gD~~~l~al~a~D~v~~~~g~~~~---------------G---r~ai~a~~~~~~~~~~~~~ 76 (139)
T 3rob_A 16 ELAIRTVQYRW-LEATRKFDRQVLSSLMTDDVVFLTPGRLPF---------------G---KEEFLAACEQNDQRVIIEA 76 (139)
T ss_dssp HHHHHHHHHHH-HHHHHTTCHHHHHHTEEEEEEEECTTSCCB---------------C---HHHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHH-HHHHHcCCHHHHHHHccCcEEEECCCCCcc---------------C---HHHHHHHHHHHHHhcCCCC
Confidence 56677888887 477778888888888777666644443332 2 4455555555555565347
Q ss_pred eeEEEEeeeCCCeEEEEEEEEeeeeccccccCC-CCCEEEEEe
Q 041144 110 AWELISVYSGPPMVAYKFKHWGYFEGPFQGHAP-TGEMVEFLW 151 (201)
Q Consensus 110 ~wEVleV~sgpp~VafkwRhwGt~~G~F~G~~P-TG~~Vei~G 151 (201)
.+++.++...||....+++...+.+ +| +|+.+.+.|
T Consensus 77 ~~~~~~i~v~GD~A~~~~~~~~~~t------~~~~g~~~~~~g 113 (139)
T 3rob_A 77 SATFEEIVIVEPMAYTRTHLHIKVT------PRSGGAVRELAG 113 (139)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEE------ETTSCCCEEEEE
T ss_pred ceEEEEEEEcCCeEEEEEEEEEEEe------cCCCCceeEeec
Confidence 7888888778887777666655544 34 788888777
No 59
>2c9i_A Green fluorescent protein ASFP499; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.82A {Anemonia sulcata}
Probab=50.68 E-value=21 Score=30.48 Aligned_cols=31 Identities=29% Similarity=0.680 Sum_probs=27.3
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 76 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 106 (226)
T 2c9i_A 76 DFFKQSLPGGFSWERVSTYEDGGVLSATQET 106 (226)
T ss_dssp CHHHHHTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999988888776
No 60
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=50.19 E-value=19 Score=32.55 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=39.9
Q ss_pred eeEEEECCCCCCChhhhhh-cCcccccCCCChHHHHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 60 KFKLIVNGRKGLSREESLQ-LGSYNALLNNSMEETFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 60 ~f~~s~Ngg~~~~~~e~~~-~G~YN~l~~~~~~e~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
.-.+.+-+||--=+=+||. .=.|-++..= +++.. -++-|+.+||.|+.||=.-.|-++-.+..+.+.
T Consensus 154 ~~K~v~t~GPLPFs~dIL~~~f~yr~FtkY--P~~Ip-~~DyFKqsfPeGyswERt~~FEDGGv~t~~~~i 221 (347)
T 3u8p_A 154 TLKFICTTGKLPVPWPTLVTTLXVQCFSRY--PDHMK-QHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 221 (347)
T ss_dssp EEEEEETTSSCSSCGGGGTTTC-CGGGSBC--CGGGG-GGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred EEEEEEcCCCCCCcHHHhhhhhhhhhhccC--CCCCC-ccchHHHhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 3456777775333334443 2235455321 22211 014588999999999998888888777776655
No 61
>1yzw_A Hcred, GFP-like non-fluorescent chromoprotein; luminescent protein; HET: CRU; 2.10A {Heteractis crispa}
Probab=49.78 E-value=21 Score=30.42 Aligned_cols=31 Identities=29% Similarity=0.698 Sum_probs=27.0
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 76 DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 106 (225)
T 1yzw_A 76 DFFKQSFPEGFTWERTTTYEDGGILTAHQDT 106 (225)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 4578999999999999999999888888776
No 62
>3p28_A Green fluorescent protein; circular permutation, fluorescence, beta barrel; HET: CSY; 1.80A {Aequorea victoria}
Probab=49.19 E-value=22 Score=30.69 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=26.5
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
.-|+.|||+|+.||=.-.|.++-.+..+.+..
T Consensus 32 DyFK~sfPeGysweRt~~FEDGGv~t~~~~is 63 (239)
T 3p28_A 32 DFFKSAMPEGYVQERTISFKDDGNYKTRAEVK 63 (239)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ChHHHhCCCceeEEEEEEECCCcEEEEEEEEE
Confidence 45789999999999998888888777776653
No 63
>2hpw_A Green fluorescent protein; GFP, structural genomics, PSI, protein initiative; HET: CSY; 1.55A {Clytia gregaria}
Probab=49.04 E-value=22 Score=30.46 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=26.9
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 81 DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 111 (233)
T 2hpw_A 81 DFFKSTQPDGYSQDRIISFDNDGQYDVKAKV 111 (233)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhcCCCceeEEEEEEEcCCcEEEEEEEE
Confidence 3578999999999999999999888887776
No 64
>2hqk_A CYAN fluorescent chromoprotein; 11-stranded beta barrel, luminescent protein; HET: PIA; 1.19A {Clavularia SP} PDB: 2ote_A* 2otb_A* 2vzx_A* 3adf_A* 2gw4_A*
Probab=48.82 E-value=23 Score=30.14 Aligned_cols=31 Identities=26% Similarity=0.632 Sum_probs=27.1
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 74 DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 104 (219)
T 2hqk_A 74 NYFKQSFPEGYSWERTMTFEDKGIVKVKSDI 104 (219)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999888888776
No 65
>2icr_A RED fluorescent protein ZOANRFP; ZRFP574, chromophore structure, Cys-Phe LINK; HET: XYG; 1.51A {Zoanthus SP} PDB: 2fl1_A* 2ojk_A* 2pxs_A* 2pxw_A* 1xa9_A* 2ogr_A* 1xae_A*
Probab=48.25 E-value=23 Score=30.45 Aligned_cols=31 Identities=16% Similarity=0.420 Sum_probs=26.7
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 87 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 117 (237)
T 2icr_A 87 DYFKNSCPAGYTWHRSFRFEDGAVCICSADI 117 (237)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred cHHHhhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 3578999999999999999888888888776
No 66
>2iov_A Fluorescent protein dronpa; reversibly switchable fluorescent protein, green-fluorescent like protein, luminescent protein; HET: GYC; 1.80A {Echinophyllia SP} PDB: 2pox_A* 2z6z_A* 2z6x_A*
Probab=47.74 E-value=24 Score=30.65 Aligned_cols=31 Identities=26% Similarity=0.557 Sum_probs=27.2
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 108 DyFKqsfPeGysweRt~~fEDGGv~t~~~~i 138 (255)
T 2iov_A 108 DYFKQSFPEGYSWERSMNYEDGGICNATNDI 138 (255)
T ss_dssp CHHHHHTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 3578999999999999999999988888776
No 67
>3vht_B Green fluorescent protein, ATPase wrnip1; green fluorescent protein, fusion protein, zinc finger, UBIQ binding domain, fluorescent protein-protein binding complex; HET: CR2; 2.40A {Aequorea victoria}
Probab=47.23 E-value=24 Score=30.97 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=24.8
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.+||+|+.||=.-.|.++-.+..+.+.
T Consensus 83 DyFKqsfPeGysweRt~~FEDGGv~t~~~~i 113 (271)
T 3vht_B 83 DFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (271)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ChHHHhCCCceeEEEEEEEcCCCEEEEEEEE
Confidence 4688999999999988888877776666554
No 68
>3cgl_A GFP-like fluorescent chromoprotein DSFP483; beta barrel, chromophore, luminescence, photoprotein, fluore protein; HET: CRQ; 2.09A {Discosoma striata}
Probab=47.21 E-value=24 Score=30.40 Aligned_cols=31 Identities=19% Similarity=0.474 Sum_probs=27.2
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 90 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 120 (241)
T 3cgl_A 90 DYLKLSFPEGYTWERSMHFEDGGLCCITNDI 120 (241)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999988888776
No 69
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=45.99 E-value=86 Score=22.99 Aligned_cols=111 Identities=8% Similarity=0.002 Sum_probs=61.3
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEE-CCCCCCChhhhhhcCcccccCCCChHHHHHHHHHHHHHhCC
Q 041144 28 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIV-NGRKGLSREESLQLGSYNALLNNSMEETFKSSHDAFRSAFP 106 (201)
Q Consensus 28 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~-Ngg~~~~~~e~~~~G~YN~l~~~~~~e~f~~s~~~f~~AFP 106 (201)
.-++-|..|+..|. ++...-|++.+.++=.+...+.- .++. .+-+ ++.+...+..+...+|
T Consensus 17 ~d~~~I~~~~~~~~-~A~~~~D~~~l~~l~a~Dav~~~~~~~~--------------~~~G---~~~i~~~~~~~~~~~~ 78 (156)
T 3h51_A 17 GEAREVAALFDTWN-AALATGNPHKVADLYAPDGVLLPTVSNE--------------VRAS---REQIENYFEMFLTKKP 78 (156)
T ss_dssp SHHHHHHHHHHHHH-HHHHHTCHHHHHTTEEEEEEEECSSCSS--------------CBCS---HHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHH-HHHHcCCHHHHHhhcCCCEEEecCCCCc--------------cccC---HHHHHHHHHHHHhhCC
Confidence 34555666666664 35555666666555333333221 0111 1112 5667777777777777
Q ss_pred CCceeE--EEEeeeCCCeEEEEEEEEeeeeccccccCCCCCEEEEEe---------ce--EEEEEEeeeCh
Q 041144 107 RGFAWE--LISVYSGPPMVAYKFKHWGYFEGPFQGHAPTGEMVEFLW---------DW--DYEDVEIYYHP 164 (201)
Q Consensus 107 dGf~wE--VleV~sgpp~VafkwRhwGt~~G~F~G~~PTG~~Vei~G---------d~--KI~e~w~~~D~ 164 (201)
. ...+ .++++ +++.....++...+.. .++|+.+.+.| +| ||+.+....-|
T Consensus 79 ~-~~i~~~~i~~~-~gd~A~~~~~~~~~~~------~~~G~~~~~~~r~t~v~~r~dG~WkIv~~H~S~~p 141 (156)
T 3h51_A 79 K-GVINYRTVRLL-DDDSAVDAGVYTFTLT------DKNGKKSDVQARYTFVYEKRDGKWLIINHHSSAMP 141 (156)
T ss_dssp E-EEEEEEEEEEC-SSSEEEEEEEEEEEEE------CTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEECS
T ss_pred C-CcccceEEEEe-cCCeEEEEEEEEEEEE------cCCCCeEEEEeEEEEEEEEECCEEEEEEEeecCCC
Confidence 6 3444 34443 6787777666654432 24677666655 44 88877776544
No 70
>2wur_A Green fluorescent protein; chromophore, beta-barrel, luminescence, photoprotein, bioluminescence; HET: CSY IPA EOH; 0.90A {Aequorea victoria} PDB: 1emk_A* 1eme_A* 1emc_A* 1eml_A* 1s6z_A* 1z1p_A* 1z1q_A* 1q4a_A* 1c4f_A* 1emb_A* 1emg_A* 1ema_A* 1hcj_A* 1q4b_A* 1w7s_A* 1w7t_A* 1w7u_A* 2emd_A* 1emm_A* 2emn_A* ...
Probab=45.09 E-value=28 Score=29.99 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=27.3
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 80 DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 110 (236)
T 2wur_A 80 DFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 110 (236)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 5689999999999999999998888887766
No 71
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=44.96 E-value=31 Score=31.11 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=27.2
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 80 d~fk~~~p~Gy~~eR~~~fEDgg~~~~~~~~ 110 (362)
T 2jad_A 80 DFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 110 (362)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ChHHHhCCCceeEEEEEEEcCCcEEEEEEEE
Confidence 5688999999999999999998888887666
No 72
>2ejo_A Fluorescent protein; GFP-like protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: CFY; 1.65A {Fungia concinna} PDB: 2ejp_A* 2zmu_A* 2zmw_A* 3mgf_A*
Probab=44.87 E-value=28 Score=29.64 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=26.8
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
-|+.+||.|+.||=.-.|.++-.+..+.+..
T Consensus 78 yFK~sfPeGys~eRt~~FEDGGv~t~~~~is 108 (223)
T 2ejo_A 78 YFKQAFPEGLSWERSLEFEDGGSASVSAHIS 108 (223)
T ss_dssp HHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 5789999999999999999988888877763
No 73
>3ir8_A Large stokes shift fluorescent protein; beta barrel; HET: CRQ; 1.63A {Montipora SP} SCOP: d.22.1.1 PDB: 2wht_A* 2whs_A* 2whu_A* 3vk1_A* 2p4m_A* 2arl_A* 3vic_A* 1mov_A* 1mou_A*
Probab=44.55 E-value=29 Score=29.53 Aligned_cols=32 Identities=22% Similarity=0.524 Sum_probs=26.9
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
.-|+.+||.|+.||=.-.|.++-.+..+.+..
T Consensus 77 dyFk~sfpeGys~eRt~~fEDGGv~t~~~~is 108 (221)
T 3ir8_A 77 DYFKQSFPEGYTWERSMNFEDGAVCTVSNDSS 108 (221)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred hhHHhhCCCceeEEEEEEEcCCcEEEEEEEEE
Confidence 35789999999999999999888888777763
No 74
>2ib5_A Chromo protein, cjblue; beta barrel, alpha helix, chromophore, luminescent protein; HET: CRQ; 1.80A {Cnidopus japonicus} PDB: 2ib6_A*
Probab=44.06 E-value=21 Score=30.67 Aligned_cols=31 Identities=29% Similarity=0.744 Sum_probs=27.1
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 79 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 109 (233)
T 2ib5_A 79 DYFKQSFPEGFTWERTTIYEDGAYLTTQQET 109 (233)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999888888776
No 75
>2c9j_A Green fluorescent protein FP512; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.35A {Cerianthus membranaceus}
Probab=43.84 E-value=21 Score=30.41 Aligned_cols=31 Identities=19% Similarity=0.483 Sum_probs=27.1
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 75 DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 105 (223)
T 2c9j_A 75 DYFKGSFPEAFQWNRRIEFEDGGVINMSSDI 105 (223)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 4577999999999999999999988888776
No 76
>2rh7_A Green fluorescent protein; HET: CRO; 1.50A {Renilla reniformis} SCOP: d.22.1.1
Probab=43.54 E-value=21 Score=30.74 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=27.3
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 79 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 109 (239)
T 2rh7_A 79 DYFLQSFPEGFTYERNIRYQDGGTAIVKSDI 109 (239)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999988888776
No 77
>3ned_A Pamcherry1 protein; RFP, beta barrel, fluorescent protein; HET: NRQ CH6 EYG; 0.95A {Discosoma SP} SCOP: d.22.1.1 PDB: 3kcs_A* 3kct_A* 3lf3_A* 3nez_A* 2h5q_A* 2h5o_A* 2h5p_A* 2h5r_A* 3nf0_A* 4h3l_A* 4h3m_A* 4h3n_A* 2qli_A* 2qlg_A* 2qlh_A* 2vad_A* 2vae_A* 2h8q_A* 1zgo_A* 1ggx_A* ...
Probab=42.82 E-value=31 Score=29.71 Aligned_cols=32 Identities=25% Similarity=0.529 Sum_probs=27.2
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
.-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 92 DyFK~sfPeGys~eRt~~FEDGGv~t~~~~is 123 (242)
T 3ned_A 92 DYLKLSFPEGFKWERVMNFEDGGVVTVTQDSS 123 (242)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred CHHHHhCCCceeEEEEEEEcCCcEEEEEEEEE
Confidence 35789999999999999999988888877763
No 78
>1xmz_A ASCP595, GFP-like chromoprotein FP595; fluorescent protein, chromophore structure, lumines protein; HET: CRK; 1.38A {Anemonia sulcata} PDB: 1xqm_A*
Probab=42.34 E-value=23 Score=30.58 Aligned_cols=31 Identities=29% Similarity=0.689 Sum_probs=26.9
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 87 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 117 (241)
T 1xmz_A 87 DYFKQSFPEGFTWERTTTYEDGGFLTAHQDT 117 (241)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 4578999999999999999999888888776
No 79
>3e5t_A FP611;, RED fluorescent protein EQFP611; chromophore, luminescence, photoprotein; HET: NRQ; 1.10A {Entacmaea quadricolor} SCOP: d.22.1.1 PDB: 3e5v_A* 1uis_A* 3e5w_A* 3u0l_A* 3u0m_A* 3u0n_A* 3pjb_A* 3pib_A* 4edo_A* 3m22_A* 3pj7_A* 4eds_A* 3t6h_A* 3bxa_A* 3bx9_A* 3bxb_A* 3bxc_A* 3svn_A* 3u8a_A* 3u8c_A* ...
Probab=42.24 E-value=23 Score=30.59 Aligned_cols=31 Identities=26% Similarity=0.593 Sum_probs=26.9
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 90 yFK~sfPeGys~eRt~~FEDGGv~t~~~~is 120 (242)
T 3e5t_A 90 FFKQSFPEGFTWERVTRYEDGGVFTVMQDTS 120 (242)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 4789999999999999999998888877763
No 80
>2a46_A GFP-like fluorescent chromoprotein AMFP486; beta barrel, luminescent protein; HET: CR7; 1.65A {Anemonia majano} PDB: 2a48_A* 2a47_A*
Probab=41.49 E-value=24 Score=30.41 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=27.0
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 92 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 122 (238)
T 2a46_A 92 DYFKQAFPDGMSYERTFTYEDGGVATASWEI 122 (238)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 3577899999999999999999988888776
No 81
>2g6y_A Green fluorescent protein 2; natural chromophore, rapid matura beta-CAN, luminescent protein; HET: CR2; 1.60A {Pontellina plumata} PDB: 2g6x_A* 2g3o_A*
Probab=40.40 E-value=37 Score=28.77 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.7
Q ss_pred HHHHHhC-CCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAF-PRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AF-PdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|| |.|+.||=.-.|.++-.+..+++.
T Consensus 70 DyFK~sf~peGysweRt~~fEDGGv~t~~~~i 101 (217)
T 2g6y_A 70 NPFLHAINNGGYTNTRIEKYEDGGVLHVSFSY 101 (217)
T ss_dssp CHHHHGGGTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhcCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 4578999 999999999999999999988877
No 82
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=40.37 E-value=5.2 Score=27.12 Aligned_cols=24 Identities=25% Similarity=0.418 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEE
Q 041144 91 EETFKSSHDAFRSAFPRGFAWELIS 115 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEVle 115 (201)
+..+++..+.++.+||+ +--||++
T Consensus 9 ~~e~~~~~~~L~~MFP~-lD~evI~ 32 (54)
T 1p3q_Q 9 ENERKDTLNTLQNMFPD-MDPSLIE 32 (54)
T ss_dssp HHHHHHHHHHHHHHSTT-SCHHHHH
T ss_pred HHHHHHHHHHHHHHccc-CCHHHHH
Confidence 67888999999999999 8776643
No 83
>3ai4_A Yeast enhanced green fluorescent protein, DNA POL IOTA; UBM, ubiquitin-binding motif, GFP, fusion, fluorescent prote replication; HET: CR2; 1.60A {Aequorea victoria} PDB: 2kwu_A* 2ktf_B* 2l0g_A*
Probab=39.77 E-value=36 Score=30.00 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 98 HDAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 98 ~~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
.+-|+.|||.|+.||=.-.|.++-.+..+.+.
T Consensus 82 ~DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 113 (283)
T 3ai4_A 82 HDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (283)
T ss_dssp GCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CChHHHhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 35789999999999999999988888877666
No 84
>2gw3_A Kaede; beta barrel, luminescent protein; HET: CR8; 1.40A {Trachyphyllia geoffroyi} PDB: 1zux_A* 3s05_A* 3p8u_A* 3tmr_A* 3tmt_A* 2vvh_A* 2vvi_A* 2vvj_A* 2btj_A* 2gw4_B* 2ddc_A* 2ddd_A* 2ie2_A* 2z1o_A* 2z6y_A* 2gx2_A* 2gx0_A* 3ls3_A* 3lsa_A* 1xss_A* ...
Probab=39.71 E-value=22 Score=30.35 Aligned_cols=31 Identities=26% Similarity=0.591 Sum_probs=27.1
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|||.|+.||=.-.|.++-.+..+++.
T Consensus 77 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 107 (225)
T 2gw3_A 77 DYFKQSFPKGFSWERSLMFEDGGVCIATNDI 107 (225)
T ss_dssp CTTTTSTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 4577899999999999999999888888776
No 85
>2dd7_A Green fluorescent protein; luminescent protein; HET: CR2 CXS; 1.90A {Chiridius poppei} PDB: 2dd9_A*
Probab=39.48 E-value=34 Score=28.96 Aligned_cols=31 Identities=13% Similarity=0.284 Sum_probs=27.7
Q ss_pred HHHHHhC-CCCceeEEEEeeeCCCeEEEEEEE
Q 041144 99 DAFRSAF-PRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 99 ~~f~~AF-PdGf~wEVleV~sgpp~VafkwRh 129 (201)
+-|+.|| |.|+.||=.-.|.++-.+..+++.
T Consensus 67 DyFK~sf~peGysweRt~~fEDGGv~t~~~~i 98 (216)
T 2dd7_A 67 NIYLHAATNGGYTNTRKEIYEDGGILEVNFRY 98 (216)
T ss_dssp CHHHHHHTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hHHHhccCCCceeEEEEEEECCCcEEEEEEEE
Confidence 3577899 999999999999999999988887
No 86
>3rwa_A Fluorescent protein FP480; GFP-like fluoresent proteins, mkate, circular permutated, FL protein; HET: NRQ; 1.67A {Entacmaea quadricolor} PDB: 3rwt_A*
Probab=38.25 E-value=29 Score=29.82 Aligned_cols=74 Identities=23% Similarity=0.515 Sum_probs=46.1
Q ss_pred eeeccceeEEEECC-CCCCChhhhhhc----Cc-----ccccC---CCCh----HHHHHHHHHHHHHhCCCCceeEEEEe
Q 041144 54 KTINPEKFKLIVNG-RKGLSREESLQL----GS-----YNALL---NNSM----EETFKSSHDAFRSAFPRGFAWELISV 116 (201)
Q Consensus 54 ~si~~~~f~~s~Ng-g~~~~~~e~~~~----G~-----YN~l~---~~~~----~e~f~~s~~~f~~AFPdGf~wEVleV 116 (201)
-+||-.+|.+.=.| |++..+...+++ |. |..|. +.-. +++.. .-|+.|||.|+.||=.-.
T Consensus 87 G~VNGh~F~i~GeG~G~p~eG~q~~~l~vtkG~pLPFs~dILs~~fG~r~F~kYP~~i~---dyFk~sfpeGys~eRt~~ 163 (233)
T 3rwa_A 87 GTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFXSKTFINHTQGIP---DFFKQSFPEGFTWERVTT 163 (233)
T ss_dssp EEETTEEEEEEEEEEEETTTTEEEEEEEEEESCSCSSCGGGGGGGC-CTTCCBCTTTCC---CTTGGGTTTCEEEEEEEE
T ss_pred EEECCEEEEEEEEEeecCCCCEEEEEEEEccCCcCCCCHHHhhhhhcccccccCCCCCC---CHHHHhCCCCeeEEEEEE
Confidence 36666666665444 466666665543 42 21111 1111 23222 347899999999999999
Q ss_pred eeCCCeEEEEEEEE
Q 041144 117 YSGPPMVAYKFKHW 130 (201)
Q Consensus 117 ~sgpp~VafkwRhw 130 (201)
|.++-.+....+..
T Consensus 164 fEDGGv~t~~~~i~ 177 (233)
T 3rwa_A 164 YEDGGVLTATQDTS 177 (233)
T ss_dssp ETTSCEEEEEEEEE
T ss_pred EcCCcEEEEEEEEE
Confidence 99999988887763
No 87
>3o6u_A Uncharacterized protein CPE2226; structural genomics, protein structure initiative, NESG, CPR biology; 2.50A {Clostridium perfringens}
Probab=37.33 E-value=32 Score=26.22 Aligned_cols=32 Identities=9% Similarity=0.000 Sum_probs=24.6
Q ss_pred eeeeccccccCCCCCE--EEEEe-ceEEEEEEeee
Q 041144 131 GYFEGPFQGHAPTGEM--VEFLW-DWDYEDVEIYY 162 (201)
Q Consensus 131 Gt~~G~F~G~~PTG~~--Vei~G-d~KI~e~w~~~ 162 (201)
||++|...|+...|-+ |+|+= ++||+++.+-.
T Consensus 5 GtY~g~~~g~~~~g~~v~V~VTVkdgkIt~i~~~~ 39 (128)
T 3o6u_A 5 GDYTVETAKADDHGYKAKLSIKVSDGKITEAKYNE 39 (128)
T ss_dssp EEEEEEESSCCTTSEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEEEEEecccccCCeEEEEEEEECCEEEEEEEec
Confidence 8899999997766654 45555 99999999853
No 88
>3osr_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 2.00A {Escherichia coli}
Probab=37.30 E-value=36 Score=32.23 Aligned_cols=97 Identities=20% Similarity=0.287 Sum_probs=53.9
Q ss_pred HHHHHHhHheeeeeccccCCcccceeeccceeEEEECC-CCCCChhhhhhc----Cc----cccc---CCCCh-----HH
Q 041144 30 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNG-RKGLSREESLQL----GS----YNAL---LNNSM-----EE 92 (201)
Q Consensus 30 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ng-g~~~~~~e~~~~----G~----YN~l---~~~~~-----~e 92 (201)
+-+|...=.-|+=++..|...+- +|+-.+|.+.=.| |+++.+...+++ |- |..| ++ +. ++
T Consensus 446 ~~~~~~~~~~f~~~m~~~~~~~g--~vn~~~f~~~g~g~g~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~p~ 522 (653)
T 3osr_A 446 GSMVSKGEELFTGVVPILVELDG--DVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLX-VQCFSRYPD 522 (653)
T ss_dssp -----CGGGGGSSCEEEEEEEEE--EETTEEEEEEEEEEEEGGGTEEEEEEEETTSSCSSCGGGGTTTC--CGGGSBCCG
T ss_pred cceeecchhhccccceEEEEEEE--EECCEEEEEEEEEeecCCCCeEEEEEEEecCCCCCCHHHhhhhhc-ccccccCCC
Confidence 33444444444444455555443 6666666655433 455555554433 21 1111 11 11 33
Q ss_pred HHHHHHHHHHHhCCCCceeEEEEeeeCCCeEEEEEEEE
Q 041144 93 TFKSSHDAFRSAFPRGFAWELISVYSGPPMVAYKFKHW 130 (201)
Q Consensus 93 ~f~~s~~~f~~AFPdGf~wEVleV~sgpp~VafkwRhw 130 (201)
+.. -.+-|+.+||+|+.||=.-.|.++-++..+.+..
T Consensus 523 ~~~-~~~~~~~~~~~g~~~~r~~~~ed~~~~~~~~~~~ 559 (653)
T 3osr_A 523 HMK-QHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVK 559 (653)
T ss_dssp GGG-GGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred CCC-CCCHHHHhCCCCceEEEEEEEcCCCEEEEEEEEE
Confidence 322 1357899999999999999999999998887764
No 89
>2zo6_A CYAN-emitting GFP-like protein, kusabira-CYAN (KC; luminescent protein, structural genomics, structural genomics/proteomics initiative, RSGI; HET: GYS; 1.40A {Fungia concinna} PDB: 2zo7_A*
Probab=37.02 E-value=31 Score=30.00 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=25.8
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEE
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKH 129 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRh 129 (201)
-|+.+||.|+.||=.-.|.++-.+..+.+.
T Consensus 107 yfK~sfPeGysweRt~~fEDGGv~t~~~~i 136 (252)
T 2zo6_A 107 YFKQCFPGGYSWERKFEFEDGGLAIAKAEI 136 (252)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCceeEEEEEEECCCCEEEEEEEE
Confidence 577899999999999999888888877765
No 90
>2ejh_A CYAN-emitting GFP-like protein, kusabira-CYAN (KCY); structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GYS; 1.40A {Fungia concinna} PDB: 2zo6_A* 2eji_A* 2zo7_A*
Probab=36.83 E-value=31 Score=30.01 Aligned_cols=45 Identities=20% Similarity=0.358 Sum_probs=32.6
Q ss_pred HHHHhCCCCceeEEEEeeeCCCeEEEEEEEE---eeeecccc---ccCCCC
Q 041144 100 AFRSAFPRGFAWELISVYSGPPMVAYKFKHW---GYFEGPFQ---GHAPTG 144 (201)
Q Consensus 100 ~f~~AFPdGf~wEVleV~sgpp~VafkwRhw---Gt~~G~F~---G~~PTG 144 (201)
-|+.+||.|+.||=.-.|.++-.+..+.+.. +.+.+.++ ++||+|
T Consensus 110 yFKqsfPeGYsweRt~~FEDGGv~t~~~~isleg~~~~~~v~~~GnFP~dG 160 (255)
T 2ejh_A 110 YFKQCFPGGYSWERKFEFEDGGLAIAKAEISLKGNCFEHKSTIEGTFPDSS 160 (255)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEEEEETTEEEEEEEEEEECCTTC
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEEEEECCEEEEEEEEEeeCCCCC
Confidence 4789999999999999999988888777653 12222211 677777
No 91
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=30.73 E-value=57 Score=30.28 Aligned_cols=71 Identities=18% Similarity=0.500 Sum_probs=45.9
Q ss_pred eeeccceeEEEECCC-CCCChhhhhhc----Cc-----c---------cccCCCChHHHHHHHHHHHHHhCCCCceeEEE
Q 041144 54 KTINPEKFKLIVNGR-KGLSREESLQL----GS-----Y---------NALLNNSMEETFKSSHDAFRSAFPRGFAWELI 114 (201)
Q Consensus 54 ~si~~~~f~~s~Ngg-~~~~~~e~~~~----G~-----Y---------N~l~~~~~~e~f~~s~~~f~~AFPdGf~wEVl 114 (201)
-+|+-.+|.+.=.|. +++.+...++. |. | ..+..- +++... -|+.+||.|+.|+=.
T Consensus 168 G~vngh~f~~~g~G~g~p~~G~~~~~~~v~~g~plpfs~~il~~~~~~~~f~~y--P~~i~~---~fk~~~p~g~t~~R~ 242 (440)
T 3u0k_A 168 GSVNGHQFKCTGEGEGNPYMGTQTMRIKVIEGGPLPFAFDILATSXXSRTFIKY--PKGIPD---FFKQSFPEGFTWERV 242 (440)
T ss_dssp EEETTEEEEEEEEEEEETTTTEEEEEEEEEESCSCSSCGGGGTTCC-CTTSCBC--CTTSCC---HHHHTTTTCEEEEEE
T ss_pred EEECCeEEEEEeeecCCCCCCeEEEEEEEecCCCCCCcHHHhccccchhhhccC--CCCchh---HHHHhCcCCceeeEE
Confidence 367777777665553 66666655542 32 2 222110 333332 388999999999999
Q ss_pred EeeeCCCeEEEEEEE
Q 041144 115 SVYSGPPMVAYKFKH 129 (201)
Q Consensus 115 eV~sgpp~VafkwRh 129 (201)
-.|.++-.++...++
T Consensus 243 ~~fedgg~~t~~~~~ 257 (440)
T 3u0k_A 243 TRYEDGGVITVMQDT 257 (440)
T ss_dssp EEETTSCEEEEEEEE
T ss_pred EEecCCCEEEEeeee
Confidence 999998887777665
No 92
>3r8n_P 30S ribosomal protein S16; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_P 1p87_P* 1vs7_P* 2avy_P 2aw7_P 1vs5_P 2i2u_P 2i2p_P* 2qan_P* 2qb9_P* 2qbb_P* 2qbd_P 2qbf_P 2qbh_P* 2qbj_P* 2qou_P* 2qow_P* 2qoy_P* 2qp0_P* 2vho_P ...
Probab=22.02 E-value=16 Score=26.60 Aligned_cols=42 Identities=12% Similarity=0.231 Sum_probs=28.0
Q ss_pred cCCcccceeeccceeEEEE-CCCCCCChhhhhhcCcccccCCC
Q 041144 47 KTSLNDFKTINPEKFKLIV-NGRKGLSREESLQLGSYNALLNN 88 (201)
Q Consensus 47 K~~~~dw~si~~~~f~~s~-Ngg~~~~~~e~~~~G~YN~l~~~ 88 (201)
|.+++-.-.-..-.|++.| +-..+-.+.-|-++|+|||+-..
T Consensus 3 kIRL~R~G~kk~PfYrIVvadsr~~RdGr~IE~lG~YnP~~~~ 45 (82)
T 3r8n_P 3 TIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASE 45 (82)
T ss_dssp EEEEEECSCTTSCCEEEEEEETTSCTTSCEEEEEEEECTTCCS
T ss_pred EEhhhcCCCCCCCEEEEEEeecCCCCCCCceeeeeEEcCCCCC
Confidence 3445555555566677765 44456777777788999998653
No 93
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.29 E-value=8.9 Score=26.81 Aligned_cols=22 Identities=23% Similarity=0.697 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHhCCCCceeEE
Q 041144 91 EETFKSSHDAFRSAFPRGFAWEL 113 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~wEV 113 (201)
..+|++.+..++.|||+ +.-+|
T Consensus 15 ~~~~~~~v~~L~~MFP~-lD~~v 36 (67)
T 2dhy_A 15 RLEFNQAMDDFKTMFPN-MDYDI 36 (67)
T ss_dssp CCCSHHHHHHHHHHCSS-SCHHH
T ss_pred CCCHHHHHHHHHHHCCC-CCHHH
Confidence 56788899999999998 76554
No 94
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=21.11 E-value=2e+02 Score=20.46 Aligned_cols=38 Identities=11% Similarity=0.044 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhCCCCce--eEEEEeeeCCCeEEEEEE
Q 041144 91 EETFKSSHDAFRSAFPRGFA--WELISVYSGPPMVAYKFK 128 (201)
Q Consensus 91 ~e~f~~s~~~f~~AFPdGf~--wEVleV~sgpp~VafkwR 128 (201)
++.....+..+...|+.+.. .+.+++...++..+...+
T Consensus 45 ~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~~~~ 84 (142)
T 2gxf_A 45 KEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVLVLSQ 84 (142)
T ss_dssp HHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEEEEEEE
Confidence 55556555555555544333 455667777887654433
No 95
>3bbn_P Ribosomal protein S16; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.26 E-value=19 Score=26.57 Aligned_cols=40 Identities=13% Similarity=0.261 Sum_probs=26.9
Q ss_pred cCCcccceeeccceeEEEE-CCCCCCChhhhhhcCcccccC
Q 041144 47 KTSLNDFKTINPEKFKLIV-NGRKGLSREESLQLGSYNALL 86 (201)
Q Consensus 47 K~~~~dw~si~~~~f~~s~-Ngg~~~~~~e~~~~G~YN~l~ 86 (201)
|.+++-.-....-.|++.| +-..+-.+.-|-++|+|||+.
T Consensus 3 kIRL~R~G~KkrPfYrIVvadsr~~RDGr~IE~lG~YnP~~ 43 (88)
T 3bbn_P 3 KLRLKRCGRKQRAVYRIVAIDVRSRREGRDLQKVGFYDPIK 43 (88)
T ss_dssp EECCCCCSCTTCCCCCCCCEETTSCSSSCCSSCCCCBCTTS
T ss_pred EEecccCCCCCCCeEEEEEEecCCCCCCCcEeEEEeccCCC
Confidence 4455555555555666554 445577777788889999984
Done!