Query 041145
Match_columns 522
No_of_seqs 348 out of 3556
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 06:35:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 1.8E-50 6.3E-55 420.2 36.1 358 12-502 3-391 (464)
2 3gwf_A Cyclohexanone monooxyge 100.0 1.7E-50 5.9E-55 426.4 25.5 391 11-445 8-453 (540)
3 4ap3_A Steroid monooxygenase; 100.0 1.5E-49 5E-54 420.1 30.0 415 11-469 21-497 (549)
4 3uox_A Otemo; baeyer-villiger 100.0 5.9E-50 2E-54 422.8 26.3 421 11-469 9-492 (545)
5 1w4x_A Phenylacetone monooxyge 100.0 2E-47 6.9E-52 405.2 29.5 393 11-446 16-463 (542)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 1.4E-46 4.6E-51 390.3 32.9 354 11-498 6-410 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 5.2E-38 1.8E-42 315.7 26.4 342 11-449 3-352 (357)
8 3d1c_A Flavin-containing putat 100.0 1.1E-33 3.8E-38 285.9 26.7 322 11-461 4-351 (369)
9 4b63_A L-ornithine N5 monooxyg 100.0 5E-34 1.7E-38 299.0 23.6 210 11-250 39-286 (501)
10 3lzw_A Ferredoxin--NADP reduct 100.0 2.8E-32 9.6E-37 271.3 21.5 289 11-445 7-311 (332)
11 2zbw_A Thioredoxin reductase; 100.0 1.1E-31 3.7E-36 267.6 19.9 293 11-445 5-313 (335)
12 3fbs_A Oxidoreductase; structu 100.0 2.3E-31 7.8E-36 260.4 21.8 281 12-445 3-288 (297)
13 2q7v_A Thioredoxin reductase; 100.0 1E-30 3.4E-35 259.6 25.6 287 11-446 8-309 (325)
14 3ab1_A Ferredoxin--NADP reduct 100.0 6.1E-31 2.1E-35 265.0 23.1 298 8-446 11-325 (360)
15 3f8d_A Thioredoxin reductase ( 100.0 1.3E-30 4.4E-35 258.1 24.3 282 11-445 15-313 (323)
16 3itj_A Thioredoxin reductase 1 100.0 3.2E-31 1.1E-35 264.3 20.0 290 11-445 22-331 (338)
17 2a87_A TRXR, TR, thioredoxin r 100.0 2.5E-30 8.5E-35 257.9 22.5 284 10-445 13-312 (335)
18 2q0l_A TRXR, thioredoxin reduc 100.0 3.3E-30 1.1E-34 254.2 22.3 287 12-445 2-305 (311)
19 3r9u_A Thioredoxin reductase; 100.0 1.2E-29 4.3E-34 250.2 23.5 289 11-445 4-308 (315)
20 1trb_A Thioredoxin reductase; 100.0 9.8E-30 3.4E-34 251.7 21.4 286 11-445 5-310 (320)
21 1fl2_A Alkyl hydroperoxide red 100.0 1.6E-29 5.6E-34 249.0 22.4 284 12-445 2-301 (310)
22 1vdc_A NTR, NADPH dependent th 100.0 1.5E-29 5.1E-34 251.9 21.9 285 11-444 8-318 (333)
23 3cty_A Thioredoxin reductase; 100.0 2.5E-29 8.5E-34 248.9 21.5 282 11-445 16-312 (319)
24 3klj_A NAD(FAD)-dependent dehy 100.0 1.5E-29 5.2E-34 256.1 10.8 279 11-448 9-295 (385)
25 3oc4_A Oxidoreductase, pyridin 100.0 6.4E-28 2.2E-32 250.2 22.3 293 12-448 3-315 (452)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 3.3E-27 1.1E-31 248.6 27.2 285 11-445 212-512 (521)
27 4fk1_A Putative thioredoxin re 100.0 7.3E-28 2.5E-32 236.6 20.6 284 8-445 3-296 (304)
28 4eqs_A Coenzyme A disulfide re 100.0 6.2E-28 2.1E-32 248.7 20.8 295 12-449 1-313 (437)
29 3s5w_A L-ornithine 5-monooxyge 100.0 1.5E-27 5E-32 248.6 23.6 205 12-251 31-267 (463)
30 3iwa_A FAD-dependent pyridine 100.0 2E-28 6.9E-33 255.5 16.6 303 11-448 3-330 (472)
31 2bc0_A NADH oxidase; flavoprot 100.0 8.7E-28 3E-32 251.6 20.4 294 11-448 35-362 (490)
32 3ics_A Coenzyme A-disulfide re 100.0 1.9E-28 6.6E-33 262.5 15.6 296 11-446 36-352 (588)
33 3l8k_A Dihydrolipoyl dehydroge 100.0 1.6E-27 5.4E-32 248.1 19.3 302 11-447 4-333 (466)
34 3ef6_A Toluene 1,2-dioxygenase 100.0 2.7E-28 9.2E-33 249.7 12.7 289 12-448 3-310 (410)
35 2wpf_A Trypanothione reductase 100.0 4.1E-27 1.4E-31 246.5 21.5 305 11-447 7-355 (495)
36 4gcm_A TRXR, thioredoxin reduc 99.9 3.6E-27 1.2E-31 232.6 19.8 171 11-246 6-179 (312)
37 1xhc_A NADH oxidase /nitrite r 99.9 2.9E-28 1E-32 245.4 12.1 281 12-447 9-297 (367)
38 3urh_A Dihydrolipoyl dehydroge 99.9 5.7E-28 2E-32 253.2 14.3 310 9-448 23-364 (491)
39 3lxd_A FAD-dependent pyridine 99.9 2.2E-27 7.4E-32 243.6 18.2 291 11-448 9-322 (415)
40 1mo9_A ORF3; nucleotide bindin 99.9 3.2E-27 1.1E-31 249.0 19.9 304 11-448 43-379 (523)
41 1xdi_A RV3303C-LPDA; reductase 99.9 2.6E-27 9E-32 248.6 18.8 314 11-447 2-342 (499)
42 3kd9_A Coenzyme A disulfide re 99.9 4.5E-27 1.5E-31 243.7 20.1 292 11-448 3-316 (449)
43 2r9z_A Glutathione amide reduc 99.9 6.7E-28 2.3E-32 250.6 13.7 299 11-447 4-327 (463)
44 2a8x_A Dihydrolipoyl dehydroge 99.9 4.4E-28 1.5E-32 252.4 12.2 303 11-446 3-333 (464)
45 1onf_A GR, grase, glutathione 99.9 2.1E-27 7.2E-32 249.2 17.5 300 11-447 2-371 (500)
46 3ntd_A FAD-dependent pyridine 99.9 1.1E-27 3.8E-32 255.7 15.6 295 13-448 3-339 (565)
47 4a5l_A Thioredoxin reductase; 99.9 5.8E-27 2E-31 231.1 19.2 181 11-246 4-186 (314)
48 3fg2_P Putative rubredoxin red 99.9 1.6E-27 5.5E-32 243.7 15.4 289 12-448 2-311 (404)
49 1zmd_A Dihydrolipoyl dehydroge 99.9 8.4E-28 2.9E-32 250.9 13.6 308 11-448 6-346 (474)
50 3qfa_A Thioredoxin reductase 1 99.9 2.2E-27 7.6E-32 249.9 16.8 310 10-448 31-381 (519)
51 2qae_A Lipoamide, dihydrolipoy 99.9 4.5E-27 1.6E-31 245.0 18.9 309 11-448 2-341 (468)
52 2gqw_A Ferredoxin reductase; f 99.9 2.6E-27 9E-32 242.1 16.8 286 11-448 7-309 (408)
53 1ojt_A Surface protein; redox- 99.9 5.4E-27 1.9E-31 245.1 19.5 307 11-448 6-350 (482)
54 2v3a_A Rubredoxin reductase; a 99.9 2.7E-27 9.1E-32 240.4 16.7 289 11-448 4-307 (384)
55 1ges_A Glutathione reductase; 99.9 1.1E-27 3.9E-32 248.0 13.3 299 11-447 4-328 (450)
56 2eq6_A Pyruvate dehydrogenase 99.9 1.1E-27 3.8E-32 249.1 13.3 300 11-448 6-335 (464)
57 2hqm_A GR, grase, glutathione 99.9 1.4E-27 4.9E-32 249.2 14.1 305 11-447 11-347 (479)
58 3dgh_A TRXR-1, thioredoxin red 99.9 3.6E-27 1.2E-31 246.7 16.0 308 11-448 9-353 (483)
59 1dxl_A Dihydrolipoamide dehydr 99.9 4.7E-27 1.6E-31 245.1 16.4 309 11-447 6-342 (470)
60 3dk9_A Grase, GR, glutathione 99.9 5E-27 1.7E-31 245.3 16.6 302 10-447 19-356 (478)
61 3dgz_A Thioredoxin reductase 2 99.9 8.1E-28 2.8E-32 251.8 10.3 309 11-448 6-353 (488)
62 1ebd_A E3BD, dihydrolipoamide 99.9 1.6E-26 5.5E-31 240.0 19.9 304 11-447 3-333 (455)
63 1v59_A Dihydrolipoamide dehydr 99.9 1E-27 3.5E-32 250.6 10.9 307 11-447 5-350 (478)
64 1zk7_A HGII, reductase, mercur 99.9 4.1E-27 1.4E-31 245.3 15.1 304 11-447 4-334 (467)
65 3o0h_A Glutathione reductase; 99.9 3E-27 1E-31 247.2 12.9 300 11-447 26-351 (484)
66 1lvl_A Dihydrolipoamide dehydr 99.9 6E-27 2.1E-31 243.1 14.6 298 11-447 5-330 (458)
67 2cdu_A NADPH oxidase; flavoenz 99.9 1.3E-26 4.5E-31 240.4 16.9 294 13-448 2-318 (452)
68 1fec_A Trypanothione reductase 99.9 5.2E-26 1.8E-30 237.9 21.5 305 11-447 3-351 (490)
69 2yqu_A 2-oxoglutarate dehydrog 99.9 9.6E-27 3.3E-31 241.6 15.6 304 12-448 2-328 (455)
70 4dna_A Probable glutathione re 99.9 1.9E-26 6.6E-31 239.8 17.4 300 11-448 5-332 (463)
71 3ic9_A Dihydrolipoamide dehydr 99.9 1.8E-27 6.3E-32 249.1 9.5 307 11-446 8-337 (492)
72 1nhp_A NADH peroxidase; oxidor 99.9 4.9E-26 1.7E-30 235.8 19.1 293 13-448 2-317 (447)
73 3lad_A Dihydrolipoamide dehydr 99.9 1.9E-26 6.3E-31 240.9 16.0 308 11-448 3-344 (476)
74 3h8l_A NADH oxidase; membrane 99.9 9.6E-27 3.3E-31 238.4 13.0 294 13-448 3-335 (409)
75 4g6h_A Rotenone-insensitive NA 99.9 6.5E-27 2.2E-31 244.6 10.6 302 11-451 42-403 (502)
76 4b1b_A TRXR, thioredoxin reduc 99.9 4.4E-26 1.5E-30 239.0 16.4 309 11-448 42-385 (542)
77 2x8g_A Thioredoxin glutathione 99.9 3E-26 1E-30 245.9 15.1 309 11-447 107-459 (598)
78 1q1r_A Putidaredoxin reductase 99.9 3.6E-26 1.2E-30 235.3 14.9 292 11-448 4-320 (431)
79 3cgb_A Pyridine nucleotide-dis 99.9 3.4E-25 1.2E-29 231.3 19.1 295 12-448 37-354 (480)
80 2vdc_G Glutamate synthase [NAD 99.9 9.5E-26 3.3E-30 232.8 11.7 295 11-445 122-440 (456)
81 1lqt_A FPRA; NADP+ derivative, 99.9 1.6E-25 5.5E-30 231.4 11.2 171 9-246 1-202 (456)
82 3k30_A Histamine dehydrogenase 99.9 1.4E-25 4.9E-30 244.0 6.8 266 11-448 391-674 (690)
83 3sx6_A Sulfide-quinone reducta 99.9 5E-25 1.7E-29 227.4 10.3 295 12-445 5-340 (437)
84 1m6i_A Programmed cell death p 99.9 4.8E-25 1.6E-29 230.7 9.9 314 8-448 8-353 (493)
85 1cjc_A Protein (adrenodoxin re 99.9 9.7E-24 3.3E-28 218.3 15.0 167 11-247 6-201 (460)
86 2gag_A Heterotetrameric sarcos 99.9 3E-23 1E-27 232.7 18.5 288 11-446 128-441 (965)
87 1o94_A Tmadh, trimethylamine d 99.9 2E-24 6.7E-29 236.0 7.9 277 11-448 389-699 (729)
88 1ps9_A 2,4-dienoyl-COA reducta 99.9 2.4E-23 8.2E-28 225.9 13.3 287 11-444 373-671 (671)
89 3h28_A Sulfide-quinone reducta 99.9 2.3E-23 7.9E-28 214.6 6.7 292 12-445 3-329 (430)
90 3hyw_A Sulfide-quinone reducta 99.9 8.1E-23 2.8E-27 210.3 8.5 104 338-445 208-329 (430)
91 1gte_A Dihydropyrimidine dehyd 99.9 1.8E-22 6.1E-27 227.9 11.2 170 11-248 187-369 (1025)
92 1y56_A Hypothetical protein PH 99.9 1.1E-21 3.7E-26 205.2 13.3 260 11-449 108-377 (493)
93 3vrd_B FCCB subunit, flavocyto 99.8 2.2E-20 7.6E-25 190.6 18.5 290 12-445 3-320 (401)
94 2gqf_A Hypothetical protein HI 99.4 1.6E-13 5.6E-18 139.1 4.3 138 8-169 1-170 (401)
95 2ywl_A Thioredoxin reductase r 99.3 1.3E-11 4.5E-16 110.6 10.3 99 338-446 64-168 (180)
96 3cgv_A Geranylgeranyl reductas 99.1 1.2E-10 4.2E-15 117.8 11.2 134 9-166 2-162 (397)
97 3v76_A Flavoprotein; structura 99.1 1.4E-10 4.7E-15 118.0 10.6 133 10-170 26-190 (417)
98 3oz2_A Digeranylgeranylglycero 99.1 2.7E-10 9.2E-15 115.0 11.7 136 9-166 2-162 (397)
99 2ywl_A Thioredoxin reductase r 99.1 3E-10 1E-14 101.6 10.7 106 12-165 2-109 (180)
100 1yvv_A Amine oxidase, flavin-c 99.1 3.7E-10 1.3E-14 111.6 10.3 128 11-165 2-161 (336)
101 3fmw_A Oxygenase; mithramycin, 99.1 7.7E-10 2.6E-14 117.1 13.2 132 11-166 49-207 (570)
102 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 2E-10 6.9E-15 114.0 8.0 127 13-165 3-164 (342)
103 2qa1_A PGAE, polyketide oxygen 99.0 9.7E-10 3.3E-14 114.7 12.5 133 11-166 11-165 (500)
104 3rp8_A Flavoprotein monooxygen 99.0 3E-10 1E-14 115.6 8.1 132 7-166 19-181 (407)
105 3fpz_A Thiazole biosynthetic e 99.0 1.1E-11 3.6E-16 122.4 -3.1 148 11-245 65-216 (326)
106 2cul_A Glucose-inhibited divis 99.0 1.3E-09 4.5E-14 101.7 11.0 118 11-165 3-124 (232)
107 3alj_A 2-methyl-3-hydroxypyrid 99.0 6.9E-10 2.3E-14 111.8 9.2 135 1-165 1-159 (379)
108 2qa2_A CABE, polyketide oxygen 99.0 1.7E-09 5.7E-14 112.9 12.2 133 11-166 12-166 (499)
109 3ihg_A RDME; flavoenzyme, anth 99.0 1.7E-09 5.7E-14 114.2 11.9 136 11-166 5-183 (535)
110 3nix_A Flavoprotein/dehydrogen 99.0 2.3E-09 8E-14 109.4 12.6 133 11-166 5-166 (421)
111 3i3l_A Alkylhalidase CMLS; fla 99.0 3E-09 1E-13 112.8 13.8 138 7-166 19-188 (591)
112 3e1t_A Halogenase; flavoprotei 98.9 3.2E-09 1.1E-13 111.2 12.3 133 11-166 7-172 (512)
113 2bry_A NEDD9 interacting prote 98.9 8E-10 2.7E-14 115.2 7.2 132 11-165 92-229 (497)
114 2xdo_A TETX2 protein; tetracyc 98.9 2.9E-09 9.9E-14 107.9 10.7 128 10-166 25-182 (398)
115 3ces_A MNMG, tRNA uridine 5-ca 98.9 1.8E-09 6.1E-14 114.0 8.5 167 11-243 28-221 (651)
116 3c96_A Flavin-containing monoo 98.9 9.7E-09 3.3E-13 104.5 13.2 134 9-166 2-169 (410)
117 2i0z_A NAD(FAD)-utilizing dehy 98.9 2.4E-09 8.2E-14 110.2 8.2 129 11-165 26-190 (447)
118 2x3n_A Probable FAD-dependent 98.9 3.8E-09 1.3E-13 107.0 9.4 129 12-166 7-166 (399)
119 2cul_A Glucose-inhibited divis 98.9 4.4E-09 1.5E-13 98.1 9.1 108 336-447 74-230 (232)
120 3nlc_A Uncharacterized protein 98.9 5.5E-09 1.9E-13 109.3 10.6 130 11-165 107-276 (549)
121 1k0i_A P-hydroxybenzoate hydro 98.9 3.7E-09 1.2E-13 107.0 8.2 134 11-166 2-163 (394)
122 2gmh_A Electron transfer flavo 98.8 2.2E-08 7.5E-13 106.4 13.7 134 11-166 35-217 (584)
123 3atr_A Conserved archaeal prot 98.8 9.3E-09 3.2E-13 106.0 10.6 131 11-166 6-162 (453)
124 2r0c_A REBC; flavin adenine di 98.8 4.3E-08 1.5E-12 103.5 15.8 129 11-166 26-196 (549)
125 2vou_A 2,6-dihydroxypyridine h 98.8 4.8E-09 1.6E-13 106.3 7.9 128 11-166 5-153 (397)
126 1rp0_A ARA6, thiazole biosynth 98.8 4.7E-08 1.6E-12 94.1 13.6 132 11-165 39-190 (284)
127 3nyc_A D-arginine dehydrogenas 98.8 9.8E-09 3.4E-13 103.1 8.6 35 11-45 9-44 (381)
128 1ryi_A Glycine oxidase; flavop 98.8 2.2E-08 7.5E-13 100.7 10.8 59 80-165 160-218 (382)
129 3dme_A Conserved exported prot 98.8 3.1E-08 1E-12 98.8 11.7 62 82-166 148-209 (369)
130 2uzz_A N-methyl-L-tryptophan o 98.8 3.5E-08 1.2E-12 98.8 12.1 35 11-45 2-38 (372)
131 1y0p_A Fumarate reductase flav 98.8 6.5E-08 2.2E-12 102.7 14.5 134 11-166 126-317 (571)
132 2zxi_A TRNA uridine 5-carboxym 98.8 1.3E-08 4.5E-13 107.0 8.7 167 11-243 27-220 (637)
133 4hb9_A Similarities with proba 98.8 1.1E-08 3.8E-13 103.7 8.0 32 13-44 3-36 (412)
134 3ps9_A TRNA 5-methylaminomethy 98.7 4.5E-08 1.5E-12 106.1 12.5 59 82-166 415-473 (676)
135 2dkh_A 3-hydroxybenzoate hydro 98.7 5.5E-08 1.9E-12 104.5 12.6 139 11-166 32-211 (639)
136 3dje_A Fructosyl amine: oxygen 98.7 2E-08 7E-13 103.0 8.7 37 11-47 6-45 (438)
137 1y56_B Sarcosine oxidase; dehy 98.7 6.5E-08 2.2E-12 97.2 11.8 58 81-165 146-204 (382)
138 3cp8_A TRNA uridine 5-carboxym 98.7 3E-08 1E-12 104.6 8.6 170 11-243 21-215 (641)
139 1qo8_A Flavocytochrome C3 fuma 98.7 1.4E-07 4.9E-12 99.9 13.8 134 11-166 121-312 (566)
140 3da1_A Glycerol-3-phosphate de 98.7 1.6E-07 5.3E-12 99.3 13.5 38 11-48 18-57 (561)
141 3pvc_A TRNA 5-methylaminomethy 98.6 1.7E-07 5.7E-12 101.8 13.6 60 82-166 410-469 (689)
142 2gf3_A MSOX, monomeric sarcosi 98.6 1E-07 3.4E-12 96.0 10.8 35 11-45 3-39 (389)
143 4at0_A 3-ketosteroid-delta4-5a 98.6 4.3E-07 1.5E-11 95.0 15.1 37 11-47 41-79 (510)
144 3k7m_X 6-hydroxy-L-nicotine ox 98.6 2E-07 6.8E-12 95.3 12.1 38 12-49 2-41 (431)
145 3kkj_A Amine oxidase, flavin-c 98.6 3.2E-08 1.1E-12 93.9 5.6 40 11-50 2-43 (336)
146 2qcu_A Aerobic glycerol-3-phos 98.6 3.1E-07 1.1E-11 95.8 12.9 62 82-166 147-210 (501)
147 2oln_A NIKD protein; flavoprot 98.6 1.8E-07 6.3E-12 94.4 10.7 33 12-44 5-39 (397)
148 1pn0_A Phenol 2-monooxygenase; 98.6 4.3E-07 1.5E-11 97.8 13.5 102 11-114 8-150 (665)
149 1d4d_A Flavocytochrome C fumar 98.5 7.2E-07 2.5E-11 94.5 14.5 134 11-165 126-316 (572)
150 2gag_B Heterotetrameric sarcos 98.5 4.5E-07 1.5E-11 91.7 11.7 59 81-165 171-229 (405)
151 3jsk_A Cypbp37 protein; octame 98.5 3E-07 1E-11 89.8 9.8 101 11-114 79-189 (344)
152 3i6d_A Protoporphyrinogen oxid 98.5 3.9E-07 1.3E-11 94.1 10.6 37 12-48 6-50 (470)
153 3nrn_A Uncharacterized protein 98.5 1.3E-07 4.6E-12 96.3 6.8 37 13-49 2-40 (421)
154 3ka7_A Oxidoreductase; structu 98.5 1.7E-07 5.8E-12 95.6 7.1 37 13-49 2-40 (425)
155 2aqj_A Tryptophan halogenase, 98.4 3E-07 1E-11 96.9 8.4 61 81-166 162-222 (538)
156 2gjc_A Thiazole biosynthetic e 98.4 1.1E-06 3.6E-11 85.4 10.3 100 12-114 66-175 (326)
157 1pj5_A N,N-dimethylglycine oxi 98.4 9E-07 3.1E-11 98.1 11.1 33 11-43 4-39 (830)
158 3c4n_A Uncharacterized protein 98.4 2.6E-07 8.9E-12 93.7 5.7 32 12-43 37-72 (405)
159 2wdq_A Succinate dehydrogenase 98.4 4.8E-06 1.7E-10 88.3 15.5 35 11-45 7-43 (588)
160 3hyw_A Sulfide-quinone reducta 98.4 1.4E-06 4.7E-11 89.1 10.9 106 208-382 3-110 (430)
161 2yqu_A 2-oxoglutarate dehydrog 98.4 1.2E-06 4.1E-11 90.2 10.3 99 11-172 167-267 (455)
162 2e1m_A L-glutamate oxidase; L- 98.3 8E-07 2.7E-11 88.4 8.4 90 11-108 44-136 (376)
163 2v3a_A Rubredoxin reductase; a 98.3 2.4E-06 8.1E-11 85.9 10.4 96 11-165 145-242 (384)
164 2eq6_A Pyruvate dehydrogenase 98.3 4.5E-06 1.5E-10 86.1 12.4 102 11-172 169-274 (464)
165 2pyx_A Tryptophan halogenase; 98.3 2.6E-06 8.8E-11 89.4 10.6 61 81-166 172-233 (526)
166 3c4a_A Probable tryptophan hyd 98.2 2.1E-07 7.2E-12 93.5 1.7 117 13-166 2-143 (381)
167 2rgh_A Alpha-glycerophosphate 98.2 5.7E-06 1.9E-10 87.5 12.8 37 11-47 32-70 (571)
168 2e5v_A L-aspartate oxidase; ar 98.2 8.2E-06 2.8E-10 84.3 13.5 34 13-47 1-36 (472)
169 3vrd_B FCCB subunit, flavocyto 98.2 2.9E-06 9.8E-11 85.8 9.9 108 206-383 1-110 (401)
170 2weu_A Tryptophan 5-halogenase 98.2 2.8E-06 9.7E-11 88.8 10.1 61 81-166 170-230 (511)
171 4gde_A UDP-galactopyranose mut 98.2 5.9E-07 2E-11 93.9 4.8 39 11-49 10-51 (513)
172 2h88_A Succinate dehydrogenase 98.2 7.1E-06 2.4E-10 87.3 13.1 35 11-45 18-54 (621)
173 1ebd_A E3BD, dihydrolipoamide 98.2 6.9E-06 2.4E-10 84.5 12.6 102 11-172 170-273 (455)
174 2e4g_A Tryptophan halogenase; 98.2 2.9E-06 9.9E-11 89.5 9.8 61 81-166 191-252 (550)
175 1chu_A Protein (L-aspartate ox 98.2 3.2E-06 1.1E-10 88.8 9.9 36 11-46 8-44 (540)
176 4gut_A Lysine-specific histone 98.2 3.4E-06 1.2E-10 91.9 10.4 36 11-46 336-373 (776)
177 3axb_A Putative oxidoreductase 98.2 2.1E-06 7.1E-11 88.2 7.9 36 9-44 21-59 (448)
178 3s5w_A L-ornithine 5-monooxyge 98.2 1E-05 3.5E-10 83.3 13.1 168 11-216 227-418 (463)
179 1ges_A Glutathione reductase; 98.2 6.2E-06 2.1E-10 84.7 11.2 100 11-172 167-268 (450)
180 1onf_A GR, grase, glutathione 98.2 2.4E-05 8.4E-10 81.4 15.8 101 11-172 176-278 (500)
181 1nhp_A NADH peroxidase; oxidor 98.2 4.8E-06 1.6E-10 85.5 9.6 102 11-175 149-252 (447)
182 1kf6_A Fumarate reductase flav 98.1 1.3E-05 4.3E-10 85.3 12.9 35 11-45 5-43 (602)
183 4dgk_A Phytoene dehydrogenase; 98.1 9.9E-07 3.4E-11 92.0 4.0 39 12-50 2-42 (501)
184 1v59_A Dihydrolipoamide dehydr 98.1 1E-05 3.5E-10 83.8 11.3 104 11-172 183-290 (478)
185 2bcg_G Secretory pathway GDP d 98.1 2E-06 6.7E-11 88.5 5.7 43 8-50 8-52 (453)
186 2a8x_A Dihydrolipoyl dehydroge 98.1 1.7E-05 5.6E-10 81.9 12.6 101 11-172 171-274 (464)
187 2b9w_A Putative aminooxidase; 98.1 3.2E-06 1.1E-10 86.1 6.8 43 11-53 6-51 (424)
188 3lxd_A FAD-dependent pyridine 98.1 1.2E-05 4.2E-10 81.5 11.1 100 11-171 152-253 (415)
189 1zmd_A Dihydrolipoyl dehydroge 98.1 2.1E-05 7E-10 81.4 12.9 104 11-172 178-285 (474)
190 3lad_A Dihydrolipoamide dehydr 98.1 2.2E-05 7.5E-10 81.2 13.0 102 11-172 180-283 (476)
191 2bs2_A Quinol-fumarate reducta 98.1 2.9E-05 9.8E-10 83.2 14.1 34 11-44 5-40 (660)
192 3oc4_A Oxidoreductase, pyridin 98.1 2.2E-05 7.7E-10 80.5 12.8 99 11-172 147-247 (452)
193 1v0j_A UDP-galactopyranose mut 98.1 2.5E-06 8.6E-11 86.2 5.3 40 11-50 7-49 (399)
194 2r9z_A Glutathione amide reduc 98.1 1.2E-05 4.2E-10 82.7 10.2 100 11-172 166-267 (463)
195 3fg2_P Putative rubredoxin red 98.0 1.2E-05 4.2E-10 81.2 10.0 97 11-165 142-240 (404)
196 1rsg_A FMS1 protein; FAD bindi 98.0 2.1E-06 7.2E-11 89.9 4.3 40 11-50 8-50 (516)
197 1dxl_A Dihydrolipoamide dehydr 98.0 1.8E-05 6.2E-10 81.7 10.9 102 11-172 177-282 (470)
198 3ic9_A Dihydrolipoamide dehydr 98.0 3.6E-05 1.2E-09 79.9 13.3 101 11-172 174-277 (492)
199 3sx6_A Sulfide-quinone reducta 98.0 1.3E-05 4.4E-10 82.0 9.6 108 208-383 5-114 (437)
200 1fec_A Trypanothione reductase 98.0 1.8E-05 6.2E-10 82.1 10.8 100 11-172 187-291 (490)
201 2wpf_A Trypanothione reductase 98.0 1.9E-05 6.5E-10 82.0 10.8 100 11-172 191-295 (495)
202 3iwa_A FAD-dependent pyridine 98.0 2.1E-05 7E-10 81.3 11.0 96 11-165 159-257 (472)
203 3urh_A Dihydrolipoyl dehydroge 98.0 3.2E-05 1.1E-09 80.3 12.5 102 11-172 198-303 (491)
204 1q1r_A Putidaredoxin reductase 98.0 1.8E-05 6.3E-10 80.7 10.4 99 11-165 149-249 (431)
205 2qae_A Lipoamide, dihydrolipoy 98.0 2.8E-05 9.5E-10 80.3 11.9 102 11-172 174-279 (468)
206 1ojt_A Surface protein; redox- 98.0 1.1E-05 3.9E-10 83.5 8.9 101 11-171 185-288 (482)
207 3ef6_A Toluene 1,2-dioxygenase 98.0 1.2E-05 4.2E-10 81.4 9.0 96 11-165 143-240 (410)
208 1zk7_A HGII, reductase, mercur 98.0 1.4E-05 4.8E-10 82.4 9.5 93 11-165 176-270 (467)
209 3h8l_A NADH oxidase; membrane 98.0 1.6E-05 5.4E-10 80.5 9.7 105 208-383 2-115 (409)
210 1xdi_A RV3303C-LPDA; reductase 98.0 2.7E-05 9.2E-10 81.0 11.6 99 11-172 182-282 (499)
211 2hqm_A GR, grase, glutathione 98.0 2.1E-05 7.2E-10 81.4 10.6 101 11-171 185-287 (479)
212 2gqw_A Ferredoxin reductase; f 98.0 2.1E-05 7E-10 79.7 10.2 92 11-165 145-238 (408)
213 1sez_A Protoporphyrinogen oxid 98.0 3.6E-06 1.2E-10 87.7 4.7 40 11-50 13-54 (504)
214 2bi7_A UDP-galactopyranose mut 98.0 4.1E-06 1.4E-10 84.1 4.9 40 11-50 3-44 (384)
215 4b1b_A TRXR, thioredoxin reduc 98.0 2.4E-05 8.1E-10 81.9 10.5 98 11-172 223-322 (542)
216 3hdq_A UDP-galactopyranose mut 97.9 6.1E-06 2.1E-10 82.7 5.4 40 11-50 29-70 (397)
217 1trb_A Thioredoxin reductase; 97.9 4E-05 1.4E-09 74.5 11.0 97 11-165 145-246 (320)
218 1lvl_A Dihydrolipoamide dehydr 97.9 1.3E-05 4.4E-10 82.5 7.7 99 11-172 171-271 (458)
219 2bc0_A NADH oxidase; flavoprot 97.9 2.6E-05 8.9E-10 80.9 10.1 99 11-172 194-294 (490)
220 3o0h_A Glutathione reductase; 97.9 3.5E-05 1.2E-09 79.9 10.9 95 11-165 191-287 (484)
221 2cdu_A NADPH oxidase; flavoenz 97.9 3.1E-05 1.1E-09 79.5 10.4 99 11-172 149-250 (452)
222 1s3e_A Amine oxidase [flavin-c 97.9 6E-06 2E-10 86.5 5.1 40 11-50 4-45 (520)
223 1mo9_A ORF3; nucleotide bindin 97.9 3.6E-05 1.2E-09 80.6 11.0 99 12-171 215-318 (523)
224 3gyx_A Adenylylsulfate reducta 97.9 2.8E-05 9.6E-10 83.3 9.8 34 11-44 22-63 (662)
225 3dgh_A TRXR-1, thioredoxin red 97.9 8.5E-05 2.9E-09 76.9 13.3 102 11-172 187-292 (483)
226 3dgz_A Thioredoxin reductase 2 97.9 0.0001 3.4E-09 76.4 13.7 102 11-172 185-290 (488)
227 3klj_A NAD(FAD)-dependent dehy 97.9 1.8E-05 6.2E-10 79.3 7.8 44 339-382 71-117 (385)
228 3ntd_A FAD-dependent pyridine 97.9 4.1E-05 1.4E-09 80.9 10.9 114 11-165 151-266 (565)
229 4dsg_A UDP-galactopyranose mut 97.9 1E-05 3.5E-10 83.9 5.9 40 11-50 9-51 (484)
230 3h28_A Sulfide-quinone reducta 97.9 3.4E-05 1.2E-09 78.7 9.6 106 208-382 3-110 (430)
231 3nks_A Protoporphyrinogen oxid 97.9 6.8E-06 2.3E-10 85.0 4.5 39 12-50 3-45 (477)
232 3cgb_A Pyridine nucleotide-dis 97.9 1.9E-05 6.3E-10 81.8 7.6 94 11-165 186-281 (480)
233 3qfa_A Thioredoxin reductase 1 97.9 0.00012 4E-09 76.5 13.7 105 11-172 210-318 (519)
234 1xhc_A NADH oxidase /nitrite r 97.9 2E-05 7E-10 78.5 7.5 91 12-171 144-236 (367)
235 3lov_A Protoporphyrinogen oxid 97.9 7.8E-06 2.7E-10 84.5 4.6 40 11-50 4-47 (475)
236 2yg5_A Putrescine oxidase; oxi 97.9 8.9E-06 3E-10 83.5 4.8 40 11-50 5-46 (453)
237 1m6i_A Programmed cell death p 97.9 4.4E-05 1.5E-09 79.3 10.0 96 11-165 180-281 (493)
238 3fbs_A Oxidoreductase; structu 97.8 2.9E-05 1E-09 74.5 8.1 40 343-382 70-113 (297)
239 2zbw_A Thioredoxin reductase; 97.8 0.00012 4.1E-09 71.6 12.6 96 11-165 152-251 (335)
240 4eqs_A Coenzyme A disulfide re 97.8 5.4E-05 1.9E-09 77.3 10.3 94 11-171 147-242 (437)
241 3dk9_A Grase, GR, glutathione 97.8 8.9E-05 3E-09 76.7 11.8 103 11-172 187-296 (478)
242 2jae_A L-amino acid oxidase; o 97.8 1.3E-05 4.4E-10 83.2 5.5 40 11-50 11-52 (489)
243 2ivd_A PPO, PPOX, protoporphyr 97.8 1.6E-05 5.4E-10 82.3 4.8 40 11-50 16-57 (478)
244 4dna_A Probable glutathione re 97.8 8.9E-05 3E-09 76.3 10.4 99 11-172 170-271 (463)
245 1i8t_A UDP-galactopyranose mut 97.8 1.7E-05 5.9E-10 79.0 4.9 39 12-50 2-42 (367)
246 1jnr_A Adenylylsulfate reducta 97.7 9.2E-05 3.2E-09 79.4 10.7 33 11-43 22-60 (643)
247 2vvm_A Monoamine oxidase N; FA 97.7 1.7E-05 5.8E-10 82.4 4.5 39 12-50 40-80 (495)
248 3kd9_A Coenzyme A disulfide re 97.7 7.9E-05 2.7E-09 76.4 9.3 94 11-165 148-243 (449)
249 3d1c_A Flavin-containing putat 97.7 7.4E-05 2.5E-09 74.2 8.9 103 11-165 166-271 (369)
250 3ics_A Coenzyme A-disulfide re 97.7 7.3E-05 2.5E-09 79.4 9.3 93 11-165 187-281 (588)
251 1d5t_A Guanine nucleotide diss 97.7 2.8E-05 9.5E-10 79.4 5.8 40 11-50 6-47 (433)
252 3ab1_A Ferredoxin--NADP reduct 97.7 0.00013 4.4E-09 72.3 10.4 97 11-165 163-262 (360)
253 3p1w_A Rabgdi protein; GDI RAB 97.7 2.7E-05 9.1E-10 79.7 5.0 44 7-50 16-61 (475)
254 3f8d_A Thioredoxin reductase ( 97.6 5E-05 1.7E-09 73.7 6.1 32 208-244 16-47 (323)
255 2x8g_A Thioredoxin glutathione 97.6 0.00042 1.4E-08 73.7 13.4 104 11-171 286-397 (598)
256 1b37_A Protein (polyamine oxid 97.6 3.1E-05 1.1E-09 79.9 4.5 49 11-59 4-55 (472)
257 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00016 5.5E-09 74.4 9.7 101 11-172 172-275 (466)
258 2iid_A L-amino-acid oxidase; f 97.6 3.5E-05 1.2E-09 80.1 4.6 39 11-49 33-73 (498)
259 3ihm_A Styrene monooxygenase A 97.6 3.1E-05 1.1E-09 78.9 3.4 32 11-42 22-55 (430)
260 2q7v_A Thioredoxin reductase; 97.5 0.00043 1.5E-08 67.3 10.9 93 11-165 152-248 (325)
261 3itj_A Thioredoxin reductase 1 97.5 0.00059 2E-08 66.5 11.8 94 11-165 173-270 (338)
262 4g6h_A Rotenone-insensitive NA 97.5 0.00043 1.5E-08 71.8 10.7 94 13-165 219-331 (502)
263 3cty_A Thioredoxin reductase; 97.5 0.0005 1.7E-08 66.7 10.6 93 11-165 155-251 (319)
264 2q0l_A TRXR, thioredoxin reduc 97.4 0.00042 1.4E-08 66.9 9.7 98 11-172 143-244 (311)
265 1fl2_A Alkyl hydroperoxide red 97.4 0.00072 2.4E-08 65.2 11.2 92 11-165 144-241 (310)
266 2z3y_A Lysine-specific histone 97.4 8.1E-05 2.8E-09 80.2 4.6 40 11-50 107-148 (662)
267 1vdc_A NTR, NADPH dependent th 97.4 0.00063 2.1E-08 66.4 10.5 96 11-165 159-258 (333)
268 3alj_A 2-methyl-3-hydroxypyrid 97.4 0.00016 5.3E-09 72.3 6.1 50 333-382 110-161 (379)
269 4fk1_A Putative thioredoxin re 97.4 0.00036 1.2E-08 67.3 8.4 32 209-245 8-39 (304)
270 2xag_A Lysine-specific histone 97.4 0.0001 3.5E-09 81.0 4.9 40 11-50 278-319 (852)
271 3lzw_A Ferredoxin--NADP reduct 97.4 0.00083 2.8E-08 65.3 10.8 92 11-165 154-249 (332)
272 1c0p_A D-amino acid oxidase; a 97.3 0.00014 4.6E-09 72.2 4.9 32 11-42 6-39 (363)
273 2a87_A TRXR, TR, thioredoxin r 97.3 0.00051 1.7E-08 67.2 8.6 93 11-165 155-251 (335)
274 4a9w_A Monooxygenase; baeyer-v 97.3 0.00025 8.6E-09 69.7 6.5 34 208-246 4-37 (357)
275 2bry_A NEDD9 interacting prote 97.3 0.00034 1.1E-08 72.6 7.6 36 206-246 91-126 (497)
276 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00016 5.3E-09 77.2 4.4 39 10-48 45-85 (623)
277 3k30_A Histamine dehydrogenase 97.2 0.00044 1.5E-08 74.8 7.4 97 11-165 523-623 (690)
278 1lqt_A FPRA; NADP+ derivative, 97.2 0.00016 5.4E-09 74.2 3.0 40 207-246 3-44 (456)
279 2x3n_A Probable FAD-dependent 97.2 0.00083 2.8E-08 67.4 8.3 51 332-382 109-167 (399)
280 3r9u_A Thioredoxin reductase; 97.2 0.001 3.5E-08 64.1 8.7 94 11-165 147-243 (315)
281 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.00073 2.5E-08 70.5 7.9 45 338-382 275-327 (521)
282 3nlc_A Uncharacterized protein 97.1 0.0014 4.9E-08 68.3 9.9 49 334-382 224-278 (549)
283 2xve_A Flavin-containing monoo 97.1 0.0012 4.3E-08 67.7 9.2 33 11-43 197-231 (464)
284 3v76_A Flavoprotein; structura 97.1 0.00021 7.2E-09 72.3 3.1 47 334-381 136-187 (417)
285 3g3e_A D-amino-acid oxidase; F 97.0 0.00022 7.5E-09 70.4 2.8 31 13-43 2-40 (351)
286 1rp0_A ARA6, thiazole biosynth 97.0 0.001 3.5E-08 63.4 7.2 34 208-246 40-74 (284)
287 1cjc_A Protein (adrenodoxin re 97.0 0.00032 1.1E-08 71.9 3.6 37 207-246 6-42 (460)
288 3g5s_A Methylenetetrahydrofola 97.0 0.00058 2E-08 67.2 5.1 33 12-44 2-36 (443)
289 4a5l_A Thioredoxin reductase; 97.0 0.0027 9.2E-08 61.2 9.6 32 11-42 152-185 (314)
290 4gcm_A TRXR, thioredoxin reduc 96.9 0.0016 5.4E-08 62.9 7.5 31 209-244 8-38 (312)
291 2gv8_A Monooxygenase; FMO, FAD 96.9 0.0017 5.7E-08 66.4 7.9 32 11-42 212-246 (447)
292 2vou_A 2,6-dihydroxypyridine h 96.9 0.0015 5.1E-08 65.6 7.2 35 207-246 5-39 (397)
293 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.0015 5E-08 69.1 7.2 47 335-381 129-181 (651)
294 1yvv_A Amine oxidase, flavin-c 96.8 0.0034 1.2E-07 61.1 9.2 33 208-245 3-35 (336)
295 2gag_A Heterotetrameric sarcos 96.8 0.0036 1.2E-07 70.2 10.4 90 12-165 285-382 (965)
296 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00032 1.1E-08 75.0 1.8 33 12-44 57-100 (721)
297 4ap3_A Steroid monooxygenase; 96.8 0.0014 4.6E-08 68.8 6.2 33 208-245 22-54 (549)
298 2i0z_A NAD(FAD)-utilizing dehy 96.7 0.002 6.7E-08 65.9 7.0 48 334-381 138-191 (447)
299 3qj4_A Renalase; FAD/NAD(P)-bi 96.7 0.0039 1.3E-07 61.0 8.9 33 208-245 2-37 (342)
300 3rp8_A Flavoprotein monooxygen 96.7 0.0026 8.8E-08 64.0 7.3 36 206-246 22-57 (407)
301 3uox_A Otemo; baeyer-villiger 96.7 0.0012 4.1E-08 69.2 4.9 33 208-245 10-42 (545)
302 3t37_A Probable dehydrogenase; 96.7 0.0011 3.8E-08 69.2 4.6 33 11-43 17-52 (526)
303 2gqf_A Hypothetical protein HI 96.6 0.0012 4E-08 66.4 4.3 34 208-246 5-38 (401)
304 3gwf_A Cyclohexanone monooxyge 96.6 0.0015 5E-08 68.4 5.0 33 208-245 9-42 (540)
305 2zxi_A TRNA uridine 5-carboxym 96.6 0.0027 9.1E-08 66.9 7.0 48 334-381 127-180 (637)
306 1k0i_A P-hydroxybenzoate hydro 96.6 0.0029 1E-07 63.2 7.0 34 208-246 3-36 (394)
307 3nix_A Flavoprotein/dehydrogen 96.6 0.0041 1.4E-07 62.7 7.9 33 208-245 6-38 (421)
308 2vdc_G Glutamate synthase [NAD 96.6 0.00072 2.4E-08 69.2 2.2 36 206-246 121-156 (456)
309 3cp8_A TRNA uridine 5-carboxym 96.5 0.0032 1.1E-07 66.5 6.9 47 335-381 122-174 (641)
310 2xdo_A TETX2 protein; tetracyc 96.5 0.006 2E-07 61.1 8.6 35 207-246 26-60 (398)
311 1y56_B Sarcosine oxidase; dehy 96.5 0.0084 2.9E-07 59.5 9.6 46 336-382 155-206 (382)
312 1vg0_A RAB proteins geranylger 96.5 0.0025 8.6E-08 67.3 5.8 40 11-50 8-49 (650)
313 1ps9_A 2,4-dienoyl-COA reducta 96.4 0.0078 2.7E-07 64.8 9.0 27 11-37 494-522 (671)
314 1o94_A Tmadh, trimethylamine d 96.3 0.0063 2.2E-07 66.1 7.9 32 11-42 528-563 (729)
315 3dme_A Conserved exported prot 96.3 0.0078 2.7E-07 59.2 7.8 48 335-382 155-210 (369)
316 1y0p_A Fumarate reductase flav 96.3 0.032 1.1E-06 58.7 12.8 34 208-246 127-160 (571)
317 3dfz_A SIRC, precorrin-2 dehyd 96.2 0.0034 1.2E-07 57.1 4.5 36 204-244 28-63 (223)
318 2gag_B Heterotetrameric sarcos 96.2 0.014 4.8E-07 58.3 9.6 47 335-382 179-231 (405)
319 3atr_A Conserved archaeal prot 96.2 0.0029 1E-07 64.6 4.2 34 208-246 7-40 (453)
320 3cgv_A Geranylgeranyl reductas 96.2 0.0039 1.3E-07 62.2 4.9 33 209-246 6-38 (397)
321 3i3l_A Alkylhalidase CMLS; fla 96.1 0.0065 2.2E-07 64.2 6.7 48 334-381 132-188 (591)
322 3e1t_A Halogenase; flavoprotei 96.1 0.0044 1.5E-07 64.4 5.3 33 208-245 8-40 (512)
323 1kdg_A CDH, cellobiose dehydro 96.1 0.0036 1.2E-07 65.7 4.3 33 11-43 7-41 (546)
324 1ryi_A Glycine oxidase; flavop 96.0 0.013 4.3E-07 58.1 7.8 47 335-382 169-220 (382)
325 3fmw_A Oxygenase; mithramycin, 96.0 0.012 4.1E-07 61.9 7.9 34 208-246 50-83 (570)
326 3pvc_A TRNA 5-methylaminomethy 96.0 0.021 7.3E-07 61.6 9.9 48 335-382 417-470 (689)
327 1ju2_A HydroxynitrIle lyase; f 96.0 0.0035 1.2E-07 65.6 3.6 34 11-44 26-60 (536)
328 4hb9_A Similarities with proba 95.9 0.016 5.4E-07 57.9 7.8 34 208-246 2-35 (412)
329 1n4w_A CHOD, cholesterol oxida 95.8 0.0056 1.9E-07 63.5 4.5 35 11-45 5-41 (504)
330 1w4x_A Phenylacetone monooxyge 95.8 0.02 6.8E-07 59.9 8.7 34 208-246 17-50 (542)
331 1gpe_A Protein (glucose oxidas 95.8 0.0064 2.2E-07 64.3 4.9 35 10-44 23-60 (587)
332 1qo8_A Flavocytochrome C3 fuma 95.8 0.051 1.7E-06 57.1 11.9 34 208-246 122-155 (566)
333 1gte_A Dihydropyrimidine dehyd 95.8 0.032 1.1E-06 63.0 10.6 32 11-42 332-366 (1025)
334 3qvp_A Glucose oxidase; oxidor 95.8 0.0055 1.9E-07 64.4 4.1 32 11-42 19-53 (583)
335 3q9t_A Choline dehydrogenase a 95.8 0.0058 2E-07 64.3 4.2 33 11-43 6-41 (577)
336 3ps9_A TRNA 5-methylaminomethy 95.6 0.025 8.5E-07 60.9 8.5 48 335-382 422-474 (676)
337 4at0_A 3-ketosteroid-delta4-5a 95.5 0.088 3E-06 54.5 12.0 33 209-246 43-75 (510)
338 2qa1_A PGAE, polyketide oxygen 95.4 0.017 5.8E-07 59.8 6.3 34 208-246 12-45 (500)
339 1coy_A Cholesterol oxidase; ox 95.4 0.0098 3.4E-07 61.6 4.4 33 11-43 11-45 (507)
340 3c96_A Flavin-containing monoo 95.4 0.014 4.7E-07 58.7 5.4 34 208-246 5-39 (410)
341 1d4d_A Flavocytochrome C fumar 95.4 0.096 3.3E-06 55.0 11.9 35 207-246 126-160 (572)
342 2qa2_A CABE, polyketide oxygen 95.3 0.024 8.1E-07 58.6 6.9 35 207-246 12-46 (499)
343 3ihg_A RDME; flavoenzyme, anth 95.3 0.037 1.3E-06 57.7 8.3 34 208-246 6-39 (535)
344 3fim_B ARYL-alcohol oxidase; A 95.2 0.0079 2.7E-07 63.1 2.9 34 11-44 2-38 (566)
345 4b63_A L-ornithine N5 monooxyg 95.2 0.14 4.8E-06 52.8 12.3 33 11-43 246-282 (501)
346 2pyx_A Tryptophan halogenase; 95.1 0.024 8.1E-07 59.0 6.2 48 335-382 180-234 (526)
347 1id1_A Putative potassium chan 95.1 0.022 7.6E-07 48.4 4.9 32 10-41 2-35 (153)
348 2jbv_A Choline oxidase; alcoho 95.0 0.018 6.2E-07 60.2 4.8 34 11-44 13-49 (546)
349 2gmh_A Electron transfer flavo 94.8 0.038 1.3E-06 58.3 7.0 34 208-246 36-75 (584)
350 1pj5_A N,N-dimethylglycine oxi 94.6 0.012 4.1E-07 65.0 2.6 34 208-245 5-38 (830)
351 1y56_A Hypothetical protein PH 94.6 0.025 8.7E-07 58.3 4.7 33 208-246 109-141 (493)
352 3fwz_A Inner membrane protein 94.5 0.043 1.5E-06 45.8 5.2 32 11-42 7-40 (140)
353 2g1u_A Hypothetical protein TM 94.3 0.032 1.1E-06 47.5 4.1 32 11-42 19-52 (155)
354 3llv_A Exopolyphosphatase-rela 93.8 0.057 2E-06 45.0 4.6 30 12-41 7-38 (141)
355 3kkj_A Amine oxidase, flavin-c 93.7 0.037 1.3E-06 51.2 3.5 33 209-246 4-36 (336)
356 4e12_A Diketoreductase; oxidor 93.6 0.052 1.8E-06 51.4 4.3 34 9-42 2-37 (283)
357 3qha_A Putative oxidoreductase 93.6 0.053 1.8E-06 51.8 4.4 33 11-43 15-49 (296)
358 3ic5_A Putative saccharopine d 93.4 0.054 1.9E-06 43.3 3.6 30 12-41 6-38 (118)
359 1lss_A TRK system potassium up 93.4 0.059 2E-06 44.6 3.9 29 13-41 6-36 (140)
360 1pjq_A CYSG, siroheme synthase 93.1 0.072 2.5E-06 54.2 4.8 35 205-244 10-44 (457)
361 2hmt_A YUAA protein; RCK, KTN, 93.1 0.091 3.1E-06 43.6 4.6 30 12-41 7-38 (144)
362 4dgk_A Phytoene dehydrogenase; 92.9 0.045 1.5E-06 56.4 2.9 50 333-382 224-279 (501)
363 3ado_A Lambda-crystallin; L-gu 92.4 0.1 3.5E-06 50.1 4.5 31 12-42 7-39 (319)
364 3c85_A Putative glutathione-re 92.3 0.11 3.8E-06 45.4 4.3 32 11-42 39-73 (183)
365 2g1u_A Hypothetical protein TM 92.0 0.11 3.8E-06 44.1 3.8 39 203-246 15-53 (155)
366 3dfz_A SIRC, precorrin-2 dehyd 92.0 0.16 5.4E-06 46.0 4.9 32 10-41 30-63 (223)
367 2uyy_A N-PAC protein; long-cha 91.8 0.15 5.2E-06 49.0 4.9 32 11-42 30-63 (316)
368 1bg6_A N-(1-D-carboxylethyl)-L 91.6 0.12 4E-06 50.6 4.1 31 11-41 4-36 (359)
369 4dio_A NAD(P) transhydrogenase 91.5 0.13 4.6E-06 50.8 4.3 32 11-42 190-223 (405)
370 3l4b_C TRKA K+ channel protien 91.4 0.13 4.4E-06 46.5 3.8 30 13-42 2-33 (218)
371 3l6d_A Putative oxidoreductase 91.4 0.19 6.7E-06 48.0 5.2 40 1-42 1-42 (306)
372 4e21_A 6-phosphogluconate dehy 91.2 0.14 4.9E-06 50.1 4.1 37 6-42 17-55 (358)
373 3lk7_A UDP-N-acetylmuramoylala 91.1 0.14 4.9E-06 51.9 4.2 32 11-42 9-42 (451)
374 2x5o_A UDP-N-acetylmuramoylala 90.8 0.16 5.5E-06 51.4 4.2 33 11-43 5-39 (439)
375 2dpo_A L-gulonate 3-dehydrogen 90.8 0.19 6.6E-06 48.3 4.5 32 11-42 6-39 (319)
376 2a9f_A Putative malic enzyme ( 90.7 0.16 5.3E-06 49.9 3.8 31 11-41 188-221 (398)
377 1kyq_A Met8P, siroheme biosynt 90.5 0.11 3.9E-06 48.5 2.6 37 204-245 10-46 (274)
378 3p2y_A Alanine dehydrogenase/p 90.4 0.16 5.4E-06 49.9 3.5 32 11-42 184-217 (381)
379 3ghy_A Ketopantoate reductase 90.3 0.23 7.8E-06 48.2 4.6 29 13-41 5-35 (335)
380 4g65_A TRK system potassium up 90.3 0.15 5.1E-06 51.9 3.4 30 13-42 5-36 (461)
381 3ihm_A Styrene monooxygenase A 90.3 0.13 4.4E-06 51.9 2.8 34 207-245 22-55 (430)
382 3i83_A 2-dehydropantoate 2-red 90.3 0.2 6.9E-06 48.2 4.1 30 12-41 3-34 (320)
383 1pzg_A LDH, lactate dehydrogen 90.1 0.23 7.7E-06 48.1 4.4 31 12-42 10-43 (331)
384 1vl6_A Malate oxidoreductase; 90.1 0.19 6.4E-06 49.2 3.7 32 10-41 191-225 (388)
385 3g5s_A Methylenetetrahydrofola 90.1 0.18 6.3E-06 49.7 3.6 36 208-248 2-37 (443)
386 3oz2_A Digeranylgeranylglycero 90.0 0.17 5.7E-06 49.9 3.5 33 209-246 6-38 (397)
387 3tl2_A Malate dehydrogenase; c 89.9 0.23 7.8E-06 47.7 4.1 33 9-41 6-41 (315)
388 1kyq_A Met8P, siroheme biosynt 89.9 0.16 5.5E-06 47.6 2.9 32 10-41 12-45 (274)
389 3hn2_A 2-dehydropantoate 2-red 89.8 0.23 7.7E-06 47.7 4.0 30 12-41 3-34 (312)
390 3doj_A AT3G25530, dehydrogenas 89.6 0.25 8.4E-06 47.4 4.1 31 12-42 22-54 (310)
391 1id1_A Putative potassium chan 89.5 0.3 1E-05 41.2 4.2 34 207-245 3-36 (153)
392 3i83_A 2-dehydropantoate 2-red 89.5 0.39 1.3E-05 46.2 5.5 33 208-245 3-35 (320)
393 3nrn_A Uncharacterized protein 89.4 0.19 6.6E-06 50.3 3.3 51 332-382 191-244 (421)
394 3q2o_A Phosphoribosylaminoimid 89.4 0.32 1.1E-05 48.2 4.9 34 9-42 12-47 (389)
395 2iid_A L-amino-acid oxidase; f 89.4 0.2 6.8E-06 51.5 3.5 35 206-245 32-66 (498)
396 4ffl_A PYLC; amino acid, biosy 89.3 0.27 9.2E-06 48.2 4.3 32 12-43 2-35 (363)
397 3g0o_A 3-hydroxyisobutyrate de 89.3 0.26 9E-06 47.0 4.1 31 12-42 8-40 (303)
398 3k96_A Glycerol-3-phosphate de 89.3 0.33 1.1E-05 47.5 4.8 31 12-42 30-62 (356)
399 1t2d_A LDH-P, L-lactate dehydr 89.3 0.3 1E-05 47.1 4.4 31 12-42 5-38 (322)
400 3g79_A NDP-N-acetyl-D-galactos 89.3 0.16 5.5E-06 51.7 2.6 32 12-43 19-54 (478)
401 3gg2_A Sugar dehydrogenase, UD 89.3 0.25 8.6E-06 50.0 4.1 30 13-42 4-35 (450)
402 1f0y_A HCDH, L-3-hydroxyacyl-C 89.3 0.29 9.8E-06 46.7 4.3 31 12-42 16-48 (302)
403 3oj0_A Glutr, glutamyl-tRNA re 89.2 0.18 6.2E-06 42.1 2.5 31 11-41 21-53 (144)
404 3c4a_A Probable tryptophan hyd 89.2 0.21 7.1E-06 49.4 3.3 34 208-246 1-36 (381)
405 3pid_A UDP-glucose 6-dehydroge 89.0 0.28 9.4E-06 49.2 4.1 32 12-43 37-69 (432)
406 3gpi_A NAD-dependent epimerase 89.0 0.37 1.3E-05 45.2 4.9 31 12-42 4-36 (286)
407 1x13_A NAD(P) transhydrogenase 88.9 0.25 8.7E-06 49.2 3.8 32 11-42 172-205 (401)
408 3g17_A Similar to 2-dehydropan 88.9 0.3 1E-05 46.3 4.1 30 13-42 4-35 (294)
409 3ka7_A Oxidoreductase; structu 88.7 0.21 7.3E-06 49.9 3.1 52 332-383 198-254 (425)
410 1lld_A L-lactate dehydrogenase 88.5 0.31 1.1E-05 46.8 4.0 29 13-41 9-41 (319)
411 2ew2_A 2-dehydropantoate 2-red 88.5 0.3 1E-05 46.6 3.9 29 13-41 5-35 (316)
412 3gvi_A Malate dehydrogenase; N 88.5 0.35 1.2E-05 46.6 4.3 34 9-42 5-41 (324)
413 4huj_A Uncharacterized protein 88.4 0.25 8.6E-06 44.7 3.1 32 11-42 23-57 (220)
414 2b9w_A Putative aminooxidase; 88.4 0.3 1E-05 48.9 3.9 34 207-245 6-40 (424)
415 1l7d_A Nicotinamide nucleotide 88.3 0.34 1.2E-05 48.0 4.2 32 11-42 172-205 (384)
416 3llv_A Exopolyphosphatase-rela 88.3 0.33 1.1E-05 40.2 3.5 36 206-246 5-40 (141)
417 1ks9_A KPA reductase;, 2-dehyd 88.2 0.36 1.2E-05 45.5 4.2 30 13-42 2-33 (291)
418 2oln_A NIKD protein; flavoprot 88.2 0.31 1.1E-05 48.3 3.9 32 209-245 6-37 (397)
419 3k5i_A Phosphoribosyl-aminoimi 88.0 0.34 1.2E-05 48.3 4.0 34 6-39 19-54 (403)
420 3i6i_A Putative leucoanthocyan 87.9 0.41 1.4E-05 46.4 4.5 41 1-42 1-44 (346)
421 2hmt_A YUAA protein; RCK, KTN, 87.9 0.3 1E-05 40.3 3.1 36 205-245 4-39 (144)
422 2uzz_A N-methyl-L-tryptophan o 87.8 0.24 8.3E-06 48.5 2.8 32 209-245 4-35 (372)
423 2gf3_A MSOX, monomeric sarcosi 87.8 0.31 1.1E-05 48.0 3.6 32 209-245 5-36 (389)
424 1y6j_A L-lactate dehydrogenase 87.8 0.38 1.3E-05 46.2 4.1 30 12-41 8-41 (318)
425 3g3e_A D-amino-acid oxidase; F 87.7 0.31 1.1E-05 47.4 3.5 38 208-245 1-39 (351)
426 3nks_A Protoporphyrinogen oxid 87.7 0.23 7.8E-06 50.6 2.6 35 208-245 3-37 (477)
427 3p7m_A Malate dehydrogenase; p 87.7 0.44 1.5E-05 45.8 4.4 34 9-42 3-39 (321)
428 1lss_A TRK system potassium up 87.6 0.32 1.1E-05 39.9 3.0 35 207-246 4-38 (140)
429 2raf_A Putative dinucleotide-b 87.5 0.46 1.6E-05 42.6 4.2 32 12-43 20-53 (209)
430 2e1m_A L-glutamate oxidase; L- 87.5 0.31 1.1E-05 48.0 3.4 34 206-244 43-76 (376)
431 2p4q_A 6-phosphogluconate dehy 87.4 0.47 1.6E-05 48.6 4.7 37 5-42 5-43 (497)
432 1evy_A Glycerol-3-phosphate de 87.4 0.28 9.7E-06 48.2 3.0 30 13-42 17-48 (366)
433 3ic5_A Putative saccharopine d 87.4 0.25 8.4E-06 39.2 2.1 37 206-246 4-40 (118)
434 2ewd_A Lactate dehydrogenase,; 87.4 0.41 1.4E-05 46.0 4.1 31 12-42 5-38 (317)
435 2y0c_A BCEC, UDP-glucose dehyd 87.4 0.37 1.3E-05 49.2 3.9 31 12-42 9-41 (478)
436 3ktd_A Prephenate dehydrogenas 87.3 0.54 1.8E-05 45.6 4.8 31 12-42 9-41 (341)
437 3i6d_A Protoporphyrinogen oxid 87.2 0.23 7.8E-06 50.4 2.2 38 208-245 6-44 (470)
438 3c85_A Putative glutathione-re 87.1 0.45 1.5E-05 41.4 3.9 37 205-246 37-74 (183)
439 2o3j_A UDP-glucose 6-dehydroge 87.0 0.37 1.3E-05 49.3 3.7 30 13-42 11-44 (481)
440 2izz_A Pyrroline-5-carboxylate 86.8 0.46 1.6E-05 45.7 4.1 34 8-41 19-58 (322)
441 4gbj_A 6-phosphogluconate dehy 86.8 0.34 1.2E-05 46.1 3.0 33 11-43 5-39 (297)
442 2hjr_A Malate dehydrogenase; m 86.8 0.52 1.8E-05 45.5 4.4 31 12-42 15-48 (328)
443 3vtf_A UDP-glucose 6-dehydroge 86.7 0.5 1.7E-05 47.4 4.3 32 12-43 22-55 (444)
444 3k7m_X 6-hydroxy-L-nicotine ox 86.6 0.37 1.3E-05 48.2 3.5 32 209-245 3-34 (431)
445 4gde_A UDP-galactopyranose mut 86.6 0.44 1.5E-05 48.9 4.1 46 334-379 226-274 (513)
446 3ius_A Uncharacterized conserv 86.6 0.44 1.5E-05 44.6 3.8 30 12-41 6-37 (286)
447 2jae_A L-amino acid oxidase; o 86.6 0.38 1.3E-05 49.2 3.6 35 206-245 10-44 (489)
448 3pdu_A 3-hydroxyisobutyrate de 86.5 0.41 1.4E-05 45.2 3.4 30 13-42 3-34 (287)
449 3eag_A UDP-N-acetylmuramate:L- 86.5 0.49 1.7E-05 45.6 4.1 31 12-42 5-38 (326)
450 2vvm_A Monoamine oxidase N; FA 86.5 0.96 3.3E-05 46.2 6.5 40 102-165 272-311 (495)
451 2zyd_A 6-phosphogluconate dehy 86.5 0.53 1.8E-05 48.1 4.5 34 9-42 13-48 (480)
452 3fwz_A Inner membrane protein 86.4 0.46 1.6E-05 39.3 3.4 35 207-246 7-41 (140)
453 1ur5_A Malate dehydrogenase; o 86.4 0.53 1.8E-05 45.0 4.2 30 12-41 3-35 (309)
454 3tri_A Pyrroline-5-carboxylate 86.4 0.59 2E-05 44.0 4.4 32 11-42 3-39 (280)
455 3mog_A Probable 3-hydroxybutyr 86.4 0.58 2E-05 47.8 4.7 32 11-42 5-38 (483)
456 3c24_A Putative oxidoreductase 86.4 0.58 2E-05 44.1 4.5 30 13-42 13-45 (286)
457 2q3e_A UDP-glucose 6-dehydroge 86.4 0.39 1.3E-05 48.9 3.4 30 13-42 7-40 (467)
458 1z82_A Glycerol-3-phosphate de 86.3 0.5 1.7E-05 45.7 4.0 31 11-41 14-46 (335)
459 3vku_A L-LDH, L-lactate dehydr 86.2 0.48 1.6E-05 45.6 3.8 39 1-41 1-43 (326)
460 3dtt_A NADP oxidoreductase; st 86.2 0.54 1.8E-05 43.2 4.1 32 11-42 19-52 (245)
461 1pjc_A Protein (L-alanine dehy 86.2 0.49 1.7E-05 46.4 3.9 31 11-41 167-199 (361)
462 1c0p_A D-amino acid oxidase; a 86.2 0.4 1.4E-05 46.8 3.4 33 208-245 7-39 (363)
463 2h78_A Hibadh, 3-hydroxyisobut 86.2 0.45 1.5E-05 45.3 3.6 30 13-42 5-36 (302)
464 3ego_A Probable 2-dehydropanto 86.2 0.6 2.1E-05 44.6 4.5 32 208-245 3-34 (307)
465 3ego_A Probable 2-dehydropanto 86.1 0.53 1.8E-05 45.0 4.0 30 12-41 3-33 (307)
466 2iz1_A 6-phosphogluconate dehy 86.0 0.6 2.1E-05 47.6 4.6 32 11-42 5-38 (474)
467 3k6j_A Protein F01G10.3, confi 86.0 0.67 2.3E-05 46.8 4.9 32 11-42 54-87 (460)
468 3nyc_A D-arginine dehydrogenas 86.0 0.35 1.2E-05 47.3 2.8 47 335-382 159-210 (381)
469 2rcy_A Pyrroline carboxylate r 85.9 0.54 1.9E-05 43.5 4.0 31 12-42 5-41 (262)
470 3dje_A Fructosyl amine: oxygen 85.8 0.47 1.6E-05 47.7 3.7 48 335-382 166-222 (438)
471 1zcj_A Peroxisomal bifunctiona 85.8 0.56 1.9E-05 47.7 4.2 32 11-42 37-70 (463)
472 1s3e_A Amine oxidase [flavin-c 85.7 0.43 1.5E-05 49.3 3.4 33 208-245 5-37 (520)
473 1rsg_A FMS1 protein; FAD bindi 85.7 0.39 1.3E-05 49.6 3.0 33 208-245 9-42 (516)
474 4a7p_A UDP-glucose dehydrogena 85.7 0.59 2E-05 47.1 4.3 34 11-44 8-43 (446)
475 3pef_A 6-phosphogluconate dehy 85.6 0.54 1.9E-05 44.3 3.8 30 13-42 3-34 (287)
476 4dll_A 2-hydroxy-3-oxopropiona 85.4 0.56 1.9E-05 45.1 3.8 31 12-42 32-64 (320)
477 3qsg_A NAD-binding phosphogluc 85.3 0.5 1.7E-05 45.2 3.4 30 12-41 25-57 (312)
478 2vns_A Metalloreductase steap3 85.3 0.75 2.6E-05 41.3 4.4 30 12-41 29-60 (215)
479 3l9w_A Glutathione-regulated p 85.3 0.7 2.4E-05 46.1 4.6 31 13-43 6-38 (413)
480 3c4n_A Uncharacterized protein 85.2 0.53 1.8E-05 46.9 3.7 33 208-245 37-71 (405)
481 3vps_A TUNA, NAD-dependent epi 85.2 0.78 2.7E-05 43.6 4.8 33 11-43 7-42 (321)
482 1hdo_A Biliverdin IX beta redu 85.1 0.7 2.4E-05 40.6 4.1 31 12-42 4-37 (206)
483 4ezb_A Uncharacterized conserv 85.0 0.58 2E-05 44.9 3.7 31 12-42 25-58 (317)
484 2vhw_A Alanine dehydrogenase; 85.0 0.66 2.3E-05 45.7 4.2 31 11-41 168-200 (377)
485 1mv8_A GMD, GDP-mannose 6-dehy 85.0 0.52 1.8E-05 47.5 3.5 30 13-42 2-33 (436)
486 3cky_A 2-hydroxymethyl glutara 85.0 0.56 1.9E-05 44.4 3.6 30 12-41 5-36 (301)
487 2bi7_A UDP-galactopyranose mut 84.9 0.47 1.6E-05 46.9 3.1 33 208-245 4-36 (384)
488 3fpz_A Thiazole biosynthetic e 84.8 0.51 1.7E-05 45.4 3.2 38 205-245 63-100 (326)
489 2ivd_A PPO, PPOX, protoporphyr 84.7 0.47 1.6E-05 48.2 3.2 35 206-245 15-49 (478)
490 2v6b_A L-LDH, L-lactate dehydr 84.6 0.66 2.2E-05 44.2 3.9 29 13-41 2-34 (304)
491 3hdq_A UDP-galactopyranose mut 84.6 0.59 2E-05 46.4 3.7 34 207-245 29-62 (397)
492 3axb_A Putative oxidoreductase 84.4 0.58 2E-05 47.2 3.6 31 208-243 24-55 (448)
493 1jw9_B Molybdopterin biosynthe 84.3 0.63 2.1E-05 42.9 3.5 32 11-42 31-65 (249)
494 2qcu_A Aerobic glycerol-3-phos 84.2 0.56 1.9E-05 48.2 3.4 32 209-245 5-36 (501)
495 1pjq_A CYSG, siroheme synthase 84.1 0.68 2.3E-05 47.0 3.9 31 11-41 12-44 (457)
496 1v0j_A UDP-galactopyranose mut 84.1 0.71 2.4E-05 45.9 4.1 33 208-245 8-41 (399)
497 2eez_A Alanine dehydrogenase; 84.1 0.7 2.4E-05 45.4 3.9 31 11-41 166-198 (369)
498 2bcg_G Secretory pathway GDP d 84.1 0.61 2.1E-05 47.2 3.6 33 208-245 12-44 (453)
499 1dlj_A UDP-glucose dehydrogena 84.1 0.68 2.3E-05 46.1 3.9 30 13-42 2-32 (402)
500 4e4t_A Phosphoribosylaminoimid 84.1 0.85 2.9E-05 45.7 4.6 34 10-43 34-69 (419)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.8e-50 Score=420.21 Aligned_cols=358 Identities=23% Similarity=0.368 Sum_probs=284.8
Q ss_pred CcEEEECCCHHHHHHHHHh-C----CCC---cEEEccCCCCCcccCCC---------------ccCcccccCCCCCcccC
Q 041145 12 SKIGIIGAGISGIATAKQL-R----HYD---PLVFEATNSIGGVWKHC---------------SFNSTKLQTPRCDFEFS 68 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l-~----g~~---v~v~e~~~~~GG~w~~~---------------~~~~~~~~~~~~~~~~~ 68 (522)
++|+|||||++|+++|+.| . |++ |+|||+++.+||+|... .|+.+..+.++..+.|+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 5899999999999999999 4 789 99999999999999852 35566677788888888
Q ss_pred CCCCCCC---CCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE
Q 041145 69 DYPWPER---DDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE 145 (522)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (522)
+++++.. ..+.++++.++.+|++.+++++++.+.++++++|++++... . .+.|.|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~--~-----------------~~~~~V~~~ 143 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE--D-----------------SQTFTVTVQ 143 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET--T-----------------TTEEEEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC--C-----------------CCcEEEEEE
Confidence 8876531 11568899999999999999999876799999999998732 1 357999987
Q ss_pred eC--CeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHH
Q 041145 146 TN--QAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLA 223 (522)
Q Consensus 146 ~~--~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia 223 (522)
+. +...++.||+||+|||++ +.|++|++| |++.|.|.++|+.+|.+ ...+.+|+|+|||+|.||+|+|
T Consensus 144 ~~~~g~~~~~~~d~VVvAtG~~-s~p~~p~ip---G~~~~~g~~~hs~~~~~------~~~~~~k~VvVVG~G~sg~eiA 213 (464)
T 2xve_A 144 DHTTDTIYSEEFDYVVCCTGHF-STPYVPEFE---GFEKFGGRILHAHDFRD------ALEFKDKTVLLVGSSYSAEDIG 213 (464)
T ss_dssp ETTTTEEEEEEESEEEECCCSS-SSBCCCCCB---TTTTCCSEEEEGGGCCC------GGGGTTSEEEEECCSTTHHHHH
T ss_pred EcCCCceEEEEcCEEEECCCCC-CCCccCCCC---CcccCCceEEehhhhCC------HhHcCCCEEEEEcCCCCHHHHH
Confidence 73 213578999999999998 789999999 99999999999999987 3457899999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHH
Q 041145 224 VECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYL 303 (522)
Q Consensus 224 ~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.+|++.+. +|+++.|++... +..
T Consensus 214 ~~l~~~g~-----~V~li~~~~~~~-~~~--------------------------------------------------- 236 (464)
T 2xve_A 214 SQCYKYGA-----KKLISCYRTAPM-GYK--------------------------------------------------- 236 (464)
T ss_dssp HHHHHTTC-----SEEEEECSSCCC-CCC---------------------------------------------------
T ss_pred HHHHHhCC-----eEEEEEECCCCC-CCC---------------------------------------------------
Confidence 99999865 499999876410 000
Q ss_pred hhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecCcEEecCCceeeccEEEEeccCCCCc
Q 041145 304 VWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSGGIEFEDKSKLEADVVLLATGYDGKK 383 (522)
Q Consensus 304 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~ 383 (522)
+ ..+|+++ ..|.++++++|+|+||+++++|.||+||||+++.
T Consensus 237 ----------------------------~---------~~~V~~~-~~V~~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~ 278 (464)
T 2xve_A 237 ----------------------------W---------PENWDER-PNLVRVDTENAYFADGSSEKVDAIILCTGYIHHF 278 (464)
T ss_dssp ----------------------------C---------CTTEEEC-SCEEEECSSEEEETTSCEEECSEEEECCCBCCCC
T ss_pred ----------------------------C---------CCceEEc-CCeEEEeCCEEEECCCCEEeCCEEEECCCCCCCC
Confidence 0 1356666 4588888889999999999999999999999996
Q ss_pred cccccCCCcccccccCcccc-cccccccccCCCCceeEeecccccchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q 041145 384 KLQSILPKPFSSLLADSSGI-MPLYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQKFKLPAVEKMLEQTTK 462 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g~~~lp~~~~~~~~~~~ 462 (522)
++. ... ..+..+..+. ..+|++++.++.|||||+|++.....++.|+.||+|+|++|.|+.+||+.++|++++++
T Consensus 279 ~~l---~~~-~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~~~ 354 (464)
T 2xve_A 279 PFL---NDD-LRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADSMA 354 (464)
T ss_dssp TTB---CTT-TCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHH
T ss_pred CCc---Ccc-cccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHH
Confidence 432 211 1122223323 36899999999999999999877667899999999999999999999999999999887
Q ss_pred HHHHHHhhcccc--cCccceeeccccchHHHhhcCCCCccch
Q 041145 463 EVEIMKQTTRFF--KRHCISTFSINHSDEICEEMGWKSWRKN 502 (522)
Q Consensus 463 ~~~~~~~~~~~~--~~~~~~~~~~~y~d~L~~~~g~~~~~~~ 502 (522)
+.+. .. .+. .++.. ....|+|+|++++|+++.++.
T Consensus 355 ~~~~-~~--~~~~~~~~~~--~~~~Y~~~l~~~~g~~~~~~~ 391 (464)
T 2xve_A 355 WREK-EL--TLVTAEEMYT--YQGDYIQNLIDMTDYPSFDIP 391 (464)
T ss_dssp HHHH-HH--TCCSHHHHHH--HHHHHHHHHHTTSSSCCCCHH
T ss_pred HHHH-hh--ccCCCCCccc--cHHHHHHHHHHHcCCCCCChH
Confidence 6652 22 121 11110 135899999999999987653
No 2
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.7e-50 Score=426.43 Aligned_cols=391 Identities=19% Similarity=0.270 Sum_probs=295.6
Q ss_pred CCcEEEECCCHHHHHHHHHh---CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCC----CCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL---RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYP----WPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 83 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||+|..+.||++.++++...+.++..+ .+.+. ..++..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~-~~~~~~ 86 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWK-TTYITQ 86 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCS-BSEEEH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCc-ccCCCH
Confidence 46999999999999999999 68999999999999999998899999999998888877431 12233 567899
Q ss_pred HHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeee
Q 041145 84 VELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIG 163 (522)
Q Consensus 84 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG 163 (522)
.++.+|+..+++++++.+.++++++|+++++ ++. .+.|.|++.+++ ++.||+||+|||
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~--~~~-----------------~~~~~V~~~~G~---~i~ad~lV~AtG 144 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALY--LDD-----------------ENLWEVTTDHGE---VYRAKYVVNAVG 144 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEE--ETT-----------------TTEEEEEETTSC---EEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEE--eCC-----------------CCEEEEEEcCCC---EEEeCEEEECCc
Confidence 9999999999999999888999999999998 322 468999987764 789999999999
Q ss_pred ccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEee
Q 041145 164 KFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 164 ~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R 243 (522)
.+ +.|+.|++| |+++|.|.++|+..|.. ..+..+|+|+|||+|.||+|+|.+|++.+ ++||+++|
T Consensus 145 ~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~-----~~Vtv~~r 209 (540)
T 3gwf_A 145 LL-SAINFPNLP---GLDTFEGETIHTAAWPE------GKSLAGRRVGVIGTGSTGQQVITSLAPEV-----EHLTVFVR 209 (540)
T ss_dssp SC-CSBCCCCCT---TGGGCCSEEEEGGGCCS------SCCCTTSEEEEECCSHHHHHHHHHHTTTC-----SEEEEEES
T ss_pred cc-ccCCCCCCC---CccccCCCEEEeecCCC------ccccccceEEEECCCchHHHHHHHHHhhC-----CEEEEEEC
Confidence 98 689999999 99999999999999986 34578999999999999999999999875 46999999
Q ss_pred cCceeecCCCCCCcchHH-HHHhHhh---hhccC-----------C------CC--chhHHHHHh----------h----
Q 041145 244 TLHWTLPSYRIWGLPFFL-FYSTRSS---QFLHP-----------R------PN--LGFLRTFLC----------S---- 286 (522)
Q Consensus 244 ~~~~~~p~~~~~~~p~~~-~~~~r~~---~~~~~-----------~------~~--~~~~~~~~~----------~---- 286 (522)
++.|++|..+..-.+... .+...+. ..... . +. ...+...+. .
T Consensus 210 ~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~ 289 (540)
T 3gwf_A 210 TPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDI 289 (540)
T ss_dssp SCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCT
T ss_pred CCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhh
Confidence 999999987643222111 1110000 00000 0 00 000000000 0
Q ss_pred -hhhhhHHHHHHHHHHHHhhcC--CcccCCCCCCCccccccccccccccCcchhhhcccCcEEEE---eCceeEEecCcE
Q 041145 287 -ILSPMRKAISKFIESYLVWKL--PLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFK---RASKWWFWSGGI 360 (522)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~---~~~i~~~~~~~v 360 (522)
..........+++...++..+ +.....|.|+ ++ +|++++++++|++.+++++|+++ ...|+++++++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~-~~-----g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv 363 (540)
T 3gwf_A 290 ATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GL-----FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGV 363 (540)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC-SC-----CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEE
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-CC-----CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeE
Confidence 012334555566666655544 3334557787 54 89999999999999999999999 567999999999
Q ss_pred EecCCceeeccEEEEeccCCCCcc-cccc--CCCcccccccCcccccccccccccCCCCceeEeeccc--ccchhhHHHH
Q 041145 361 EFEDKSKLEADVVLLATGYDGKKK-LQSI--LPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIE--TVSNLQIAEI 435 (522)
Q Consensus 361 ~~~dG~~~~~D~VI~ATG~~~~~~-l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~--~~~~~~~ae~ 435 (522)
+++||+++++|+||+||||+++.. +.++ .+.+...+.....+....|+++..+++||+|++..+. ..+....+|.
T Consensus 364 ~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~ 443 (540)
T 3gwf_A 364 VTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIET 443 (540)
T ss_dssp EETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHH
T ss_pred EcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHH
Confidence 999999999999999999999852 2111 1111122222234567899999999999999994433 2334578999
Q ss_pred HHHHHHHHhc
Q 041145 436 RCKWLARLAD 445 (522)
Q Consensus 436 qa~~~a~~l~ 445 (522)
|++|++++|.
T Consensus 444 q~~~i~~~i~ 453 (540)
T 3gwf_A 444 QVEWISDTIG 453 (540)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999885
No 3
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.5e-49 Score=420.15 Aligned_cols=415 Identities=19% Similarity=0.265 Sum_probs=305.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCC----CCCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYP----WPERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 84 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||+|..+.||++.++++...+.++..+ .+.+. ..++...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~-~~~~~~~ 99 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWS-EKYATQP 99 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCS-SSSCBHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCc-cCCCCHH
Confidence 46999999999999999999 89999999999999999998899999999999998887432 12333 6789999
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++.+|++.+++++++.+.++++++|+++++ ++. .+.|.|++.+++ ++.||+||+|||.
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~--~~~-----------------~~~w~V~~~~G~---~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVL--DEE-----------------GLRWTVRTDRGD---EVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEE--ETT-----------------TTEEEEEETTCC---EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEE--cCC-----------------CCEEEEEECCCC---EEEeCEEEECcCC
Confidence 999999999999999888999999999998 332 468999987764 7999999999998
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccC-CCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEee
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYS-KLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~-~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R 243 (522)
+ +.|+.|++| |++.|.|.++|+..|. + ..++.+|+|+|||+|.||+|+|.+|++.+. +||+++|
T Consensus 158 ~-s~p~~p~ip---G~~~f~g~~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~~-----~Vtv~~r 222 (549)
T 4ap3_A 158 L-SNANTPAFD---GLDRFTGDIVHTARWPHD------GVDFTGKRVGVIGTGSSGIQSIPIIAEQAE-----QLFVFQR 222 (549)
T ss_dssp E-EECCCCCCT---TGGGCCSEEEEGGGCCTT------CCCCBTCEEEEECCSHHHHHHHHHHHHHBS-----EEEEEES
T ss_pred C-CCCCCCCCC---CcccCCCceEEecccccc------ccccCCCEEEEECCCchHHHHHHHHHhhCC-----EEEEEEC
Confidence 7 679999999 9999999999999998 4 234689999999999999999999999865 5999999
Q ss_pred cCceeecCCCCCCcchHH-HHHhHh---hhhc--------cCC--------CC---chhHHHHH-----------hhh--
Q 041145 244 TLHWTLPSYRIWGLPFFL-FYSTRS---SQFL--------HPR--------PN---LGFLRTFL-----------CSI-- 287 (522)
Q Consensus 244 ~~~~~~p~~~~~~~p~~~-~~~~r~---~~~~--------~~~--------~~---~~~~~~~~-----------~~~-- 287 (522)
++.|++|+.+..-.+... .+...+ .... ... .. ...+...+ ...
T Consensus 223 ~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~ 302 (549)
T 4ap3_A 223 SANYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLT 302 (549)
T ss_dssp SCCCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTT
T ss_pred CCCccccCcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhc
Confidence 999999987542211111 110000 0000 000 00 00000000 000
Q ss_pred hhhhHHHHHHHHHHHHhhcC--CcccCCCCCC-CccccccccccccccCcchhhhcccCcEEEE---eCceeEEecCcEE
Q 041145 288 LSPMRKAISKFIESYLVWKL--PLVKFGLKPD-HPFEEDYASCQMAILPENFFSEAEKGNILFK---RASKWWFWSGGIE 361 (522)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~---~~~i~~~~~~~v~ 361 (522)
.....+...+++.+.++.++ +.....|.|. +++ +|++++++++|++++++++|+++ .+.|+++++++|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~ 377 (549)
T 4ap3_A 303 DPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAI-----GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIV 377 (549)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCB-----TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEE
Confidence 12334555566666665554 3344567887 765 78999999999999999999999 7779999999999
Q ss_pred ecCCceeeccEEEEeccCCCCc-ccccc--CCCcccccccCcccccccccccccCCCCceeEeecccc----cchhhHHH
Q 041145 362 FEDKSKLEADVVLLATGYDGKK-KLQSI--LPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET----VSNLQIAE 434 (522)
Q Consensus 362 ~~dG~~~~~D~VI~ATG~~~~~-~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~----~~~~~~ae 434 (522)
++|| ++++|+||+||||+++. .+.++ .+.+...+..........|+++..+++||+|++..+.+ .+....+|
T Consensus 378 ~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e 456 (549)
T 4ap3_A 378 TTGA-HYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSE 456 (549)
T ss_dssp ESSC-EEECSEEEECCCEEESSTTGGGSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHH
T ss_pred eCCC-ceecCEEEECCcccccccccCceeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHH
Confidence 9999 99999999999999875 22221 11111122222334578999999999999999865543 23357899
Q ss_pred HHHHHHHHHhcCCC-----C-CCCHHHHHHHHHHHHHHHHh
Q 041145 435 IRCKWLARLADQKF-----K-LPAVEKMLEQTTKEVEIMKQ 469 (522)
Q Consensus 435 ~qa~~~a~~l~g~~-----~-lp~~~~~~~~~~~~~~~~~~ 469 (522)
.|++|++++|.... . -|+.+...++.+...+.++.
T Consensus 457 ~~~~~i~~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 497 (549)
T 4ap3_A 457 LHVDWVADAIAYLDARGAAGIEGTPEAVADWVEECRNRAEA 497 (549)
T ss_dssp HHHHHHHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHHhC
Confidence 99999999885221 1 24445555555444444443
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=5.9e-50 Score=422.79 Aligned_cols=421 Identities=21% Similarity=0.306 Sum_probs=303.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCC----CCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPW----PERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 84 (522)
.++|+|||||++|+++|.+| .|++|+|||+++.+||+|..++||++.++++...++|+..|. ..+. ..+++..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~-~~~~~~~ 87 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWS-ENFASQP 87 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCS-BSSCBHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCcc-ccCCCHH
Confidence 56999999999999999999 899999999999999999999999999999988888764332 1333 6788999
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++..|++.+++++++.+.++|+++|+++++ ++. .+.|.|++.+++ ++.||+||+|||.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~--~~~-----------------~~~w~V~~~~G~---~~~ad~lV~AtG~ 145 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARY--VEN-----------------DRLWEVTLDNEE---VVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEE--EGG-----------------GTEEEEEETTTE---EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEE--eCC-----------------CCEEEEEECCCC---EEEeCEEEECcCC
Confidence 999999999999999889999999999998 433 568999987663 7999999999998
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEee
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R 243 (522)
. +.|+.|++| |++.|.|.++|+..|....... ...+..+|+|+|||+|.||+|+|.+|++.+. +||+++|
T Consensus 146 ~-s~p~~p~ip---G~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~-----~Vtv~~r 216 (545)
T 3uox_A 146 L-SASRMPDIK---GIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAK-----ELYVFQR 216 (545)
T ss_dssp C-BC---CCCT---TGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBS-----EEEEEES
T ss_pred C-CCCcCCCCC---CccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCC-----EEEEEEc
Confidence 8 679999999 9999999999999987520000 0034689999999999999999999998754 5999999
Q ss_pred cCceeecCCCCCCcchHH-HHHhHhh---hhccCC-----------CC--------chhHHHH---------H---hh--
Q 041145 244 TLHWTLPSYRIWGLPFFL-FYSTRSS---QFLHPR-----------PN--------LGFLRTF---------L---CS-- 286 (522)
Q Consensus 244 ~~~~~~p~~~~~~~p~~~-~~~~r~~---~~~~~~-----------~~--------~~~~~~~---------~---~~-- 286 (522)
+|.|++|..+..-.+... .+..++. ...... .. ...+... + ..
T Consensus 217 ~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~ 296 (545)
T 3uox_A 217 TPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLL 296 (545)
T ss_dssp SCCCCEECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTT
T ss_pred CCCccccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhh
Confidence 999999987643222111 1111100 000000 00 0000000 0 00
Q ss_pred hhhhhHHHHHHHHHHHHhhcC--CcccCCCCC-CCccccccccccccccCcchhhhcccCcEEEE---eCceeEEecCcE
Q 041145 287 ILSPMRKAISKFIESYLVWKL--PLVKFGLKP-DHPFEEDYASCQMAILPENFFSEAEKGNILFK---RASKWWFWSGGI 360 (522)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~---~~~i~~~~~~~v 360 (522)
........+.+++...++.++ +.....|.| ++++ +|++++++++|++++++++|+++ .+.|+++++++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv 371 (545)
T 3uox_A 297 LNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPF-----GAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGI 371 (545)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCT-----TSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEE
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeE
Confidence 012334455566666665544 334456888 5775 79999999999999999999999 566999999999
Q ss_pred EecCCceeeccEEEEeccCCCCcccc-cc--CCCcccccccCcccccccccccccCCCCceeEeeccccc----chhhHH
Q 041145 361 EFEDKSKLEADVVLLATGYDGKKKLQ-SI--LPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV----SNLQIA 433 (522)
Q Consensus 361 ~~~dG~~~~~D~VI~ATG~~~~~~l~-~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~----~~~~~a 433 (522)
+++|| ++++|+||+||||+++.... ++ .+.+...+..........|+++..+++||+|++..+.++ +....+
T Consensus 372 ~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~ 450 (545)
T 3uox_A 372 KTADA-AYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCG 450 (545)
T ss_dssp EESSC-EEECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHH
T ss_pred EeCCC-eeecCEEEECCccccccccCCCceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHH
Confidence 99999 99999999999999753211 11 111122222223345679999999999999998765543 335789
Q ss_pred HHHHHHHHHHhc-----CCCCC-CCHHHHHHHHHHHHHHHHh
Q 041145 434 EIRCKWLARLAD-----QKFKL-PAVEKMLEQTTKEVEIMKQ 469 (522)
Q Consensus 434 e~qa~~~a~~l~-----g~~~l-p~~~~~~~~~~~~~~~~~~ 469 (522)
|.|++|++++|. |.... |..+...++.+...+.++.
T Consensus 451 e~~~~~i~~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 492 (545)
T 3uox_A 451 GLQAEWVLRMISYMKDNGFTYSEPTQAAENRWTEEVYADFSR 492 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHHhc
Confidence 999999999885 22222 4444555544444444443
No 5
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=2e-47 Score=405.21 Aligned_cols=393 Identities=21% Similarity=0.317 Sum_probs=290.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCC----CCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPW----PERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 84 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|..++||++.++++...+.++..+. ..+. ..++.+.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~-~~~~~~~ 94 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWT-ERYASQP 94 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCC-BSSCBHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcc-cccCCHH
Confidence 46999999999999999999 899999999999999999988999999999888887764331 1222 5688999
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++.+|++.+++++++...++++++|+++++ +++ .+.|.|++.+++ ++.||+||+|||.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~--~~~-----------------~~~w~V~~~~G~---~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAF--DEA-----------------TNTWTVDTNHGD---RIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEE--ETT-----------------TTEEEEEETTCC---EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEE--cCC-----------------CCeEEEEECCCC---EEEeCEEEECcCC
Confidence 999999999999998778999999999988 322 457999887664 7899999999999
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
. +.|++|++| |++.|.|.++|+..|... ..++.+|+|+|||+|.||+|+|.++++.+. +||+++|+
T Consensus 153 ~-s~p~~p~i~---G~~~f~G~~~hs~~~~~~-----~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~-----~vtv~~r~ 218 (542)
T 1w4x_A 153 L-SVPQLPNFP---GLKDFAGNLYHTGNWPHE-----PVDFSGQRVGVIGTGSSGIQVSPQIAKQAA-----ELFVFQRT 218 (542)
T ss_dssp C-CCCCCCCCT---TGGGCCSEEEEGGGCCSS-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBS-----EEEEEESS
T ss_pred C-CCCCCCCCC---CcccCCCceEECCCCCCc-----hhccCCCEEEEECCCccHHHHHHHHhhcCc-----eEEEEEcC
Confidence 8 789999999 999999999999998731 234689999999999999999999999865 59999999
Q ss_pred CceeecCCCCCCcchHH-HHHh---Hhhhh----cc--C-----CCC--------chhHHHHHh-----------hh--h
Q 041145 245 LHWTLPSYRIWGLPFFL-FYST---RSSQF----LH--P-----RPN--------LGFLRTFLC-----------SI--L 288 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~-~~~~---r~~~~----~~--~-----~~~--------~~~~~~~~~-----------~~--~ 288 (522)
+.|++|+.+..-.+... .+.. .+... .. + .+. ..++..... .+ .
T Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 298 (542)
T 1w4x_A 219 PHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRD 298 (542)
T ss_dssp CCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTC
T ss_pred CcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcC
Confidence 99998876532111100 0000 00000 00 0 000 001111100 00 1
Q ss_pred hhhHHHHHHHHHHHHhhcC--CcccCCCCC-CCccccccccccccccCcchhhhcccCcEEEE---eCceeEEecCcEEe
Q 041145 289 SPMRKAISKFIESYLVWKL--PLVKFGLKP-DHPFEEDYASCQMAILPENFFSEAEKGNILFK---RASKWWFWSGGIEF 362 (522)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~---~~~i~~~~~~~v~~ 362 (522)
......+.+++.+.++..+ +.....|.| ++++ +|++++++++|++.+++++|+++ ...|+++++++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~-----~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~ 373 (542)
T 1w4x_A 299 RDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF-----GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRT 373 (542)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS-----SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc-----cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEe
Confidence 1223445566666665544 334456788 5664 78999999999999999999998 56699999999999
Q ss_pred cCCceeeccEEEEeccCCCCccccccC---CCcccccccCcccccccccccccCCCCceeEe-ecccc---cchhhHHHH
Q 041145 363 EDKSKLEADVVLLATGYDGKKKLQSIL---PKPFSSLLADSSGIMPLYRGTIHPLIPNMAFV-GYIET---VSNLQIAEI 435 (522)
Q Consensus 363 ~dG~~~~~D~VI~ATG~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~v-G~~~~---~~~~~~ae~ 435 (522)
+| +++++|+|||||||+++..+..-+ +.....+..........|.++.++++||+|++ |...+ .+..+.+|.
T Consensus 374 ~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~ 452 (542)
T 1w4x_A 374 SE-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQ 452 (542)
T ss_dssp SS-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHH
T ss_pred CC-eEEecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHH
Confidence 99 899999999999999863222111 11111111112234568999999999999998 75532 233488999
Q ss_pred HHHHHHHHhcC
Q 041145 436 RCKWLARLADQ 446 (522)
Q Consensus 436 qa~~~a~~l~g 446 (522)
|++|++++|..
T Consensus 453 q~~~ia~~i~~ 463 (542)
T 1w4x_A 453 HVEWVTDHIAY 463 (542)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1.4e-46 Score=390.32 Aligned_cols=354 Identities=24% Similarity=0.357 Sum_probs=272.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC--CcEEEccCCCCCcccCCCc---------------------------------c
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY--DPLVFEATNSIGGVWKHCS---------------------------------F 53 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~~~~GG~w~~~~---------------------------------~ 53 (522)
.++|+|||||++|+++|..| .|. +|+|||+++.+||+|.... |
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 56999999999999999999 788 9999999999999998642 1
Q ss_pred CcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCC
Q 041145 54 NSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSL 133 (522)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~ 133 (522)
..+..+.++..+.|++++++... +.|+++.++.+|++.++++++. .++++++|++++. +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~--~---------------- 144 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQT-LQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEK--K---------------- 144 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTC-CSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEE--E----------------
T ss_pred hhhccCCCHHHhccCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEe--C----------------
Confidence 22223344455677888887765 7889999999999999998855 7999999999987 3
Q ss_pred CCCCCCEEEEEEeC--Ce-eEEEEECEEEEeeeccCCCCCCCCCCCCCCcccc----CCceeeccccCCCchhhhhhccC
Q 041145 134 LKGHPVWEVAVETN--QA-IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIF----GGKVLHSMDYSKLDKEAATELLE 206 (522)
Q Consensus 134 ~~~~~~~~v~~~~~--~~-~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f----~g~~~hs~~~~~~~~~~~~~~~~ 206 (522)
.+.|.|++.+. +. ..++.||+||+|||++ +.|++|++| |++.| .|.++|+.+|.+ ...++
T Consensus 145 ---~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~-s~p~~p~i~---G~~~~~~~~~g~v~~~~~~~~------~~~~~ 211 (447)
T 2gv8_A 145 ---DGSWVVTYKGTKAGSPISKDIFDAVSICNGHY-EVPYIPNIK---GLDEYAKAVPGSVLHSSLFRE------PELFV 211 (447)
T ss_dssp ---TTEEEEEEEESSTTCCEEEEEESEEEECCCSS-SSBCBCCCB---THHHHHHHSTTSEEEGGGCCC------GGGGT
T ss_pred ---CCeEEEEEeecCCCCeeEEEEeCEEEECCCCC-CCCCCCCCC---ChhhhhccCCccEEEecccCC------hhhcC
Confidence 35699998762 11 2368999999999998 689999999 98765 678999999987 34578
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCc-EEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHh
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQP-CTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLC 285 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~-Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~ 285 (522)
+|+|+|||+|.||+|+|.+|++.+ ++ ||++.|++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~-----~~~V~l~~r~~~~-------------------------------------- 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVA-----KHPIYQSLLGGGD-------------------------------------- 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTS-----CSSEEEECTTCCS--------------------------------------
T ss_pred CCEEEEEccCcCHHHHHHHHHHHh-----CCcEEEEeCCCCc--------------------------------------
Confidence 999999999999999999999875 45 9999887642
Q ss_pred hhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEe--cCcEEec
Q 041145 286 SILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFW--SGGIEFE 363 (522)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~--~~~v~~~ 363 (522)
+...+|.+. ..|.++. +.+|+|+
T Consensus 249 ------------------------------------------------------l~~~~i~~~-~~v~~~~~~~~~v~~~ 273 (447)
T 2gv8_A 249 ------------------------------------------------------IQNESLQQV-PEITKFDPTTREIYLK 273 (447)
T ss_dssp ------------------------------------------------------CBCSSEEEE-CCEEEEETTTTEEEET
T ss_pred ------------------------------------------------------CCCCCeEEe-cCeEEEecCCCEEEEC
Confidence 113345432 3467774 4579999
Q ss_pred CCce-eeccEEEEeccCCCCccccc--cCCCcccccccCcccccccccccccCCCCceeEeecccccchhhHHHHHHHHH
Q 041145 364 DKSK-LEADVVLLATGYDGKKKLQS--ILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWL 440 (522)
Q Consensus 364 dG~~-~~~D~VI~ATG~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~ 440 (522)
||++ +++|.||+||||+++.++.+ .+......+..+......+|++++.++.|+|||+|.+.....++.|+.||+|+
T Consensus 274 dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~ 353 (447)
T 2gv8_A 274 GGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFL 353 (447)
T ss_dssp TTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHH
T ss_pred CCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHH
Confidence 9987 79999999999999965400 01110112222333345689999999999999999888777789999999999
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHhhcccccCccce-eeccccchHHHhhcCCCC
Q 041145 441 ARLADQKFKLPAVEKMLEQTTKEVEIMKQTTRFFKRHCIS-TFSINHSDEICEEMGWKS 498 (522)
Q Consensus 441 a~~l~g~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~d~L~~~~g~~~ 498 (522)
|++|.|+.+||+.++|++++++..+..+...+.+ |.+. .+...|+|+|++.+|..+
T Consensus 354 a~~~~g~~~lp~~~~m~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~~l~~~~~~~~ 410 (447)
T 2gv8_A 354 ARVWSGRLKLPSKEEQLKWQDELMFSLSGANNMY--HSLDYPKDATYINKLHDWCKQAT 410 (447)
T ss_dssp HHHHTTSSCCCCHHHHHHHHHHHHHHHTTCGGGT--TBCTTTHHHHHHHHHHHHHHTCS
T ss_pred HHHHcCCCCCcCHHHHHHHHHHHHHHhcCCCcce--eecCCccHHHHHHHHHHHhCccc
Confidence 9999999999999999999887655421111111 3332 345789999999987754
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=5.2e-38 Score=315.73 Aligned_cols=342 Identities=19% Similarity=0.268 Sum_probs=253.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||.|.. .|+.+.+..+...+.+++++.+.+. ..++++.++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQ-GPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCS-SSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCc-cCCCCHHHHHH
Confidence 56999999999999999999 89999999999999999997 8999999999988889888887666 77899999999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-EEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE-VAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
|+.++++++++ .++++++|++++. + .+.|. |++.++ ++.||+||+|||.. +
T Consensus 81 ~l~~~~~~~~~--~~~~~~~v~~i~~--~-------------------~~~~~~v~~~~g----~~~~d~vV~AtG~~-~ 132 (357)
T 4a9w_A 81 YLAQYEQKYAL--PVLRPIRVQRVSH--F-------------------GERLRVVARDGR----QWLARAVISATGTW-G 132 (357)
T ss_dssp HHHHHHHHTTC--CEECSCCEEEEEE--E-------------------TTEEEEEETTSC----EEEEEEEEECCCSG-G
T ss_pred HHHHHHHHcCC--EEEcCCEEEEEEE--C-------------------CCcEEEEEeCCC----EEEeCEEEECCCCC-C
Confidence 99999999998 6999999999987 3 34577 765444 79999999999987 6
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCce
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~ 247 (522)
.|++|++| |.+.|.+..+|+..+.+ ...+.+|+|+|||+|.+|+|+|.+|++.+ +|+++.|++.+
T Consensus 133 ~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~a~~l~~~~------~v~~v~~~~~~ 197 (357)
T 4a9w_A 133 EAYTPEYQ---GLESFAGIQLHSAHYST------PAPFAGMRVAIIGGGNSGAQILAEVSTVA------ETTWITQHEPA 197 (357)
T ss_dssp GBCCCCCT---TGGGCCSEEEEGGGCCC------SGGGTTSEEEEECCSHHHHHHHHHHTTTS------EEEEECSSCCC
T ss_pred CCCCCCCC---CccccCCcEEEeccCCC------hhhcCCCEEEEECCCcCHHHHHHHHHhhC------CEEEEECCCCe
Confidence 78899999 99999999999999887 34578899999999999999999999874 39999999766
Q ss_pred eecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccc
Q 041145 248 TLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASC 327 (522)
Q Consensus 248 ~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 327 (522)
++|.... +..+. ..+ .+.+.+. ....+.+... ...
T Consensus 198 ~~~~~~~-~~~~~--------~~~------------------------~~~~~~~-------~~~~~~~~~~-----~~~ 232 (357)
T 4a9w_A 198 FLADDVD-GRVLF--------ERA------------------------TERWKAQ-------QEGREPDLPP-----GGF 232 (357)
T ss_dssp BCCTTCC-THHHH--------TC---------------------------------------------------------
T ss_pred ecchhhc-CccHH--------HHH------------------------HHHHhcc-------ccccCCCccc-----ccc
Confidence 6665421 00000 000 0000000 0000000000 001
Q ss_pred cccccCcchhhhcccCcEEEEeCceeEEecCcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCcccccccc
Q 041145 328 QMAILPENFFSEAEKGNILFKRASKWWFWSGGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLY 407 (522)
Q Consensus 328 ~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 407 (522)
....+...+...++.+.+... ..+.+++.++|+++||+++++|.||+|||++++..+.. . .++. ++++.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~g~i~~~-~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~---~--~gl~-~~~G~i~vd 305 (357)
T 4a9w_A 233 GDIVMVPPVLDARARGVLAAV-PPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHLK---G--LDLV-TPQGQVEVD 305 (357)
T ss_dssp -CBCCCHHHHHHHHTTCCCEE-CCCSEEETTEEECTTSCEEECSEEEECCCBCCCCGGGT---T--TTCB-CTTSCBCBC
T ss_pred cCcccChhHHHHHhcCceEEe-cCcceEeCCeeEECCCCEecCCEEEECCCcCCCCcccC---c--cccc-CCCCCcccc
Confidence 112344555566667665433 34778999999999999999999999999999954321 1 1222 445666777
Q ss_pred cc-cccCCCCceeEee--cccc--cchhhHHHHHHHHHHHHhcCCCC
Q 041145 408 RG-TIHPLIPNMAFVG--YIET--VSNLQIAEIRCKWLARLADQKFK 449 (522)
Q Consensus 408 ~~-~~~~~~pni~~vG--~~~~--~~~~~~ae~qa~~~a~~l~g~~~ 449 (522)
.. ++.++.||||++| .... ...+..|..||+.+|..+...+.
T Consensus 306 ~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 306 GSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp TTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred CCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 66 5778999999999 4443 23356688888888887754443
No 8
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-33 Score=285.86 Aligned_cols=322 Identities=22% Similarity=0.278 Sum_probs=218.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCCCCcccCCCccCcccccCCCC---CcccCCCCCC--CCC-----C
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATNSIGGVWKHCSFNSTKLQTPRC---DFEFSDYPWP--ERD-----D 77 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~-----~ 77 (522)
.++|+|||||++|+++|..| .|+ +|+|||+++ +||.|... .....+..+.. .+.+.++... ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW-PKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS-CTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC-cccccccCcchhcccCCchhhhhcccccccccccc
Confidence 46999999999999999999 788 999999998 99999752 11122222221 1111111111 000 0
Q ss_pred CCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECE
Q 041145 78 ASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFEL 157 (522)
Q Consensus 78 ~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~ 157 (522)
..++.+.++..|+..+++++++ .++++++|++++. + .+.|.|++.++ ++.||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~g----~~~~d~ 134 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYEL--NIFENTVVTNISA--D-------------------DAYYTIATTTE----TYHADY 134 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEE--C-------------------SSSEEEEESSC----CEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEE--C-------------------CCeEEEEeCCC----EEEeCE
Confidence 2356778999999999999988 6889999999987 3 24688876544 589999
Q ss_pred EEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 041145 158 LVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQP 237 (522)
Q Consensus 158 vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~ 237 (522)
||+|||.. .. |.+| + +.++|+..+.+ ...+.+|+|+|||+|.+|+|+|..|++.+. +
T Consensus 135 vVlAtG~~-~~---p~ip---~-----~~~~~~~~~~~------~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~-----~ 191 (369)
T 3d1c_A 135 IFVATGDY-NF---PKKP---F-----KYGIHYSEIED------FDNFNKGQYVVIGGNESGFDAAYQLAKNGS-----D 191 (369)
T ss_dssp EEECCCST-TS---BCCC---S-----SSCEEGGGCSC------GGGSCSSEEEEECCSHHHHHHHHHHHHTTC-----E
T ss_pred EEECCCCC-Cc---cCCC---C-----CceechhhcCC------hhhcCCCEEEEECCCcCHHHHHHHHHhcCC-----e
Confidence 99999976 33 4566 5 45678888776 334678999999999999999999998754 5
Q ss_pred EEEEeecCceeecCCCCCC-cchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCC
Q 041145 238 CTMVIRTLHWTLPSYRIWG-LPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKP 316 (522)
Q Consensus 238 Vt~v~R~~~~~~p~~~~~~-~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 316 (522)
||++.|++.+..|..+..- .| ..
T Consensus 192 V~lv~~~~~~~~~~~d~~~~~~----------------------------------~~---------------------- 215 (369)
T 3d1c_A 192 IALYTSTTGLNDPDADPSVRLS----------------------------------PY---------------------- 215 (369)
T ss_dssp EEEECC----------CTTSCC----------------------------------HH----------------------
T ss_pred EEEEecCCCCCCCCCCCCccCC----------------------------------HH----------------------
Confidence 9999999876533221100 00 00
Q ss_pred CCccccccccccccccCcchhhhcccCc-EEEEeCc-eeEE--ecC--cEEecCCceee-ccEEEEeccCCCCccccccC
Q 041145 317 DHPFEEDYASCQMAILPENFFSEAEKGN-ILFKRAS-KWWF--WSG--GIEFEDKSKLE-ADVVLLATGYDGKKKLQSIL 389 (522)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-v~v~~~~-i~~~--~~~--~v~~~dG~~~~-~D~VI~ATG~~~~~~l~~~~ 389 (522)
..+.+.+.+++.+ |+++.+. |.++ +++ .|++.||+++. +|.||+|||++++..+.
T Consensus 216 ---------------~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~--- 277 (369)
T 3d1c_A 216 ---------------TRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPI--- 277 (369)
T ss_dssp ---------------HHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHH---
T ss_pred ---------------HHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchh---
Confidence 0011123344564 8988876 7787 344 37788998775 69999999999985221
Q ss_pred CCcccccccCcccccccccccccCCCCceeEeecccccc-----hhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Q 041145 390 PKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-----NLQIAEIRCKWLARLADQKFKLPAVEKMLEQTT 461 (522)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-----~~~~ae~qa~~~a~~l~g~~~lp~~~~~~~~~~ 461 (522)
... ...+.++.+.++...+.++.||||++|+..... .+..++.||+++|+.|.|+..+|+.++|++...
T Consensus 278 ~~~---~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~ 351 (369)
T 3d1c_A 278 VQQ---LFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQ 351 (369)
T ss_dssp HHH---HSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred hhh---hccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHH
Confidence 110 111344556677766778999999999765421 235688999999999999999998876655443
No 9
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=5e-34 Score=299.02 Aligned_cols=210 Identities=17% Similarity=0.214 Sum_probs=155.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC--------------CCcEEEccCCCCCcccCCC-ccCcccccCC--CCCc------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH--------------YDPLVFEATNSIGGVWKHC-SFNSTKLQTP--RCDF------ 65 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g--------------~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~--~~~~------ 65 (522)
.+||+||||||+||++|..| .+ ...+.+|+.+.++ |+.. .+|+.+++++ +++.
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 36999999999999999988 32 3456778777665 7654 4888888775 2222
Q ss_pred ---ccCC--------CCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCC
Q 041145 66 ---EFSD--------YPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLL 134 (522)
Q Consensus 66 ---~~~~--------~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 134 (522)
+|.. ++++.+. ..|+++.|+.+|+++++++++. .++|+++|+++++..... ..
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~-~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~-------------~~ 180 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLS-TFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDP-------------SS 180 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTC-CSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSST-------------TS
T ss_pred CccchHHHHHHhCCccCCcccc-CCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeeccccccc-------------cc
Confidence 2211 1223333 6789999999999999999875 899999999999843211 00
Q ss_pred CCCCCEEEEEEeCCe--eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEE
Q 041145 135 KGHPVWEVAVETNQA--IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAI 212 (522)
Q Consensus 135 ~~~~~~~v~~~~~~~--~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~V 212 (522)
...+.|+|++.++++ .+++.+++||+||| ..|++|.+ ..|.|+++||.+|.+..+......++||||+|
T Consensus 181 ~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG---~~P~iP~~------~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~V 251 (501)
T 4b63_A 181 SVVDFFTVRSRNVETGEISARRTRKVVIAIG---GTAKMPSG------LPQDPRIIHSSKYCTTLPALLKDKSKPYNIAV 251 (501)
T ss_dssp SCBCEEEEEEEETTTCCEEEEEEEEEEECCC---CEECCCTT------SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEE
T ss_pred cccceEEEEEecCCCceEEEEEeCEEEECcC---CCCCCCCC------CCCCcceeeccccccchhhccccccCCcEEEE
Confidence 112469999988653 56799999999999 44776644 45789999999997632222234589999999
Q ss_pred ECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceeec
Q 041145 213 IGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTLP 250 (522)
Q Consensus 213 IG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p 250 (522)
||+|+||+|++.+|++... +.+|++++|++.|+..
T Consensus 252 VG~G~SA~ei~~~L~~~~~---~~~v~~~~R~~~~~p~ 286 (501)
T 4b63_A 252 LGSGQSAAEIFHDLQKRYP---NSRTTLIMRDSAMRPS 286 (501)
T ss_dssp ECCSHHHHHHHHHHHHHST---TCEEEEECSSSSCCBC
T ss_pred ECCcHHHHHHHHHHHhcCC---CceEEEEeCCCccccc
Confidence 9999999999999998643 3579999999977533
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.8e-32 Score=271.26 Aligned_cols=289 Identities=18% Similarity=0.171 Sum_probs=212.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||.|.. .||...+. .++. .......++..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~------~~~~--------~~~~~~~~~~~ 71 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY------DVAG--------FPKIRAQELIN 71 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC------CSTT--------CSSEEHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe------ccCC--------CCCCCHHHHHH
Confidence 45999999999999999999 89999999999999999965 55554321 1111 11235789999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
|+.++++++++ .++++++|++++. +. .+.|.|++.++ ++.||+||+|||..+..
T Consensus 72 ~~~~~~~~~~~--~~~~~~~v~~i~~--~~------------------~~~~~v~~~~g----~~~~d~vVlAtG~~~~~ 125 (332)
T 3lzw_A 72 NLKEQMAKFDQ--TICLEQAVESVEK--QA------------------DGVFKLVTNEE----THYSKTVIITAGNGAFK 125 (332)
T ss_dssp HHHHHHTTSCC--EEECSCCEEEEEE--CT------------------TSCEEEEESSE----EEEEEEEEECCTTSCCE
T ss_pred HHHHHHHHhCC--cEEccCEEEEEEE--CC------------------CCcEEEEECCC----EEEeCEEEECCCCCcCC
Confidence 99999999887 7889999999987 31 34688887655 49999999999974236
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|+ .+.+ ...+++++|+|||+|.+|+|+|..|++.+. +|+++.|.+...
T Consensus 126 p~~~~~~---g~~~~~g~~~~~-~~~~------~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~-----~v~~~~~~~~~~ 190 (332)
T 3lzw_A 126 PRKLELE---NAEQYEGKNLHY-FVDD------LQKFAGRRVAILGGGDSAVDWALMLEPIAK-----EVSIIHRRDKFR 190 (332)
T ss_dssp ECCCCCT---TGGGGBTTTEES-SCSC------GGGGBTCEEEEECSSHHHHHHHHHHTTTBS-----EEEEECSSSSCS
T ss_pred CCCCCCC---ChhhccCceEEE-ecCC------HHHcCCCEEEEECCCHhHHHHHHHHHhhCC-----eEEEEEecCcCC
Confidence 8888999 999888888887 5555 344678999999999999999999998754 599999887520
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
+.
T Consensus 191 -~~----------------------------------------------------------------------------- 192 (332)
T 3lzw_A 191 -AH----------------------------------------------------------------------------- 192 (332)
T ss_dssp -SC-----------------------------------------------------------------------------
T ss_pred -cc-----------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecC-----CceeeccEEEEeccCCCCccccccCCCccccccc
Q 041145 329 MAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFED-----KSKLEADVVLLATGYDGKKKLQSILPKPFSSLLA 398 (522)
Q Consensus 329 ~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~d-----G~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~ 398 (522)
+...+.+++.+|+++.+. +.+++.++ |.+++ ++++++|.||+|||++++..+..-+ .+..
T Consensus 193 -----~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~-----~~~~ 262 (332)
T 3lzw_A 193 -----EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNW-----GLDI 262 (332)
T ss_dssp -----HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGS-----SCCE
T ss_pred -----HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhc-----Cccc
Confidence 000122345677887765 77777654 77776 3568999999999999985432111 1111
Q ss_pred CcccccccccccccCCCCceeEeeccc----ccchhhHHHHHHHHHHHHhc
Q 041145 399 DSSGIMPLYRGTIHPLIPNMAFVGYIE----TVSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 399 ~~~~~~~l~~~~~~~~~pni~~vG~~~----~~~~~~~ae~qa~~~a~~l~ 445 (522)
+.+.+.+...+ .++.||||++|... .+.....|..||+.+|..+.
T Consensus 263 -~~g~i~vd~~~-~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 263 -EKNSIVVKSTM-ETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp -ETTEEECCTTS-BCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCeEEeCCCC-ceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 34455555543 46899999999875 33346778888888887764
No 11
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.98 E-value=1.1e-31 Score=267.61 Aligned_cols=293 Identities=17% Similarity=0.207 Sum_probs=206.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||.|.. .+|...+ +.++.+ ......++..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~------~~~~~~--------~~~~~~~~~~ 69 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA-LYPEKYI------YDVAGF--------PKVYAKDLVK 69 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH-TCTTSEE------CCSTTC--------SSEEHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec-cCCCcee------eccCCC--------CCCCHHHHHH
Confidence 46999999999999999999 89999999999999999965 3443221 111111 1234678889
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++.+.++++++ .++++++|+.++. + .+.|.|++.++. ++.||+||+|||..+..
T Consensus 70 ~l~~~~~~~~~--~~~~~~~v~~i~~--~-------------------~~~~~v~~~~g~---~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 70 GLVEQVAPFNP--VYSLGERAETLER--E-------------------GDLFKVTTSQGN---AYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp HHHHHHGGGCC--EEEESCCEEEEEE--E-------------------TTEEEEEETTSC---EEEEEEEEECCTTSEEE
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEE--C-------------------CCEEEEEECCCC---EEEeCEEEECCCCCCCC
Confidence 99988888887 6888999999987 2 235777765553 68999999999975225
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+.-+|.. +.+ ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 124 p~~~~i~---g~~~~~~~~~~~~-~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~-----~V~~v~~~~~~~ 188 (335)
T 2zbw_A 124 PRRIGAP---GEREFEGRGVYYA-VKS------KAEFQGKRVLIVGGGDSAVDWALNLLDTAR-----RITLIHRRPQFR 188 (335)
T ss_dssp ECCCCCT---TTTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS-----EEEEECSSSSCC
T ss_pred CCCCCCC---ChhhccCcEEEEe-cCc------hhhcCCCEEEEECCCHHHHHHHHHHHhhCC-----EEEEEEcCCccC
Confidence 8888888 8877766544432 333 234678999999999999999999988754 599999987531
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
+.. . .
T Consensus 189 -~~~----------------------------------------~-~--------------------------------- 193 (335)
T 2zbw_A 189 -AHE----------------------------------------A-S--------------------------------- 193 (335)
T ss_dssp -SCH----------------------------------------H-H---------------------------------
T ss_pred -ccH----------------------------------------H-H---------------------------------
Confidence 100 0 0
Q ss_pred ccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEec---CC--ceeeccEEEEeccCCCCccccccCCCccccccc
Q 041145 329 MAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFE---DK--SKLEADVVLLATGYDGKKKLQSILPKPFSSLLA 398 (522)
Q Consensus 329 ~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~---dG--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~ 398 (522)
.+.+.+.+++.+|+++.+. +.+++++ +|.++ +| +++++|.||+|||++++..+..-+ .+..
T Consensus 194 ----~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-----~~~~ 264 (335)
T 2zbw_A 194 ----VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANW-----GLAL 264 (335)
T ss_dssp ----HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGS-----CCCE
T ss_pred ----HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhc-----ceec
Confidence 0011133446678888875 7777665 47776 78 568999999999999985332111 1111
Q ss_pred CcccccccccccccCCCCceeEeecccc----cchhhHHHHHHHHHHHHhc
Q 041145 399 DSSGIMPLYRGTIHPLIPNMAFVGYIET----VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 399 ~~~~~~~l~~~~~~~~~pni~~vG~~~~----~~~~~~ae~qa~~~a~~l~ 445 (522)
..+.+.+... +.++.||||++|.... ......|..||+.+|..+.
T Consensus 265 -~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 265 -EKNKIKVDTT-MATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp -ETTEEECCTT-CBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCeeeeCCC-CCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 2345555554 3478999999998753 2345678888888888774
No 12
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.98 E-value=2.3e-31 Score=260.38 Aligned_cols=281 Identities=12% Similarity=0.078 Sum_probs=203.9
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
++|+|||||++|+++|..| .|++|+|||+++..++.+.. . .. ++. .......++..+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~-~---------------~~--~~~---~~~~~~~~~~~~ 61 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH-S---------------HG--FLG---QDGKAPGEIIAE 61 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC-C---------------CS--STT---CTTCCHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh-h---------------cC--CcC---CCCCCHHHHHHH
Confidence 5999999999999999999 89999999997644332211 0 00 110 234567889999
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCCC
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDIP 169 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p 169 (522)
+..++++++. ...++++|++++. + .+.|.|++.++. ++.||+||+|||. .|
T Consensus 62 ~~~~~~~~~~--v~~~~~~v~~i~~--~-------------------~~~~~v~~~~g~---~~~~d~vviAtG~---~~ 112 (297)
T 3fbs_A 62 ARRQIERYPT--IHWVEGRVTDAKG--S-------------------FGEFIVEIDGGR---RETAGRLILAMGV---TD 112 (297)
T ss_dssp HHHHHTTCTT--EEEEESCEEEEEE--E-------------------TTEEEEEETTSC---EEEEEEEEECCCC---EE
T ss_pred HHHHHHhcCC--eEEEEeEEEEEEE--c-------------------CCeEEEEECCCC---EEEcCEEEECCCC---CC
Confidence 9999888742 1233678999987 3 345888887664 7999999999995 47
Q ss_pred CCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceee
Q 041145 170 RMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTL 249 (522)
Q Consensus 170 ~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~ 249 (522)
+.|++| |.+.+.+..+|+..+.+ ...+++|+|+|||+|.+|+|+|..|++.+ +|+++.|++..
T Consensus 113 ~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g------~v~~v~~~~~~-- 175 (297)
T 3fbs_A 113 ELPEIA---GLRERWGSAVFHCPYCH------GYELDQGKIGVIAASPMAIHHALMLPDWG------ETTFFTNGIVE-- 175 (297)
T ss_dssp ECCCCB---TTGGGBTTTEESCHHHH------TGGGTTCEEEEECCSTTHHHHHHHGGGTS------EEEEECTTTCC--
T ss_pred CCCCCC---CchhhcCCeeEEcccCc------chhhcCCEEEEEecCccHHHHHHHhhhcC------cEEEEECCCCC--
Confidence 888899 99888777777766544 33467899999999999999999999874 49999876530
Q ss_pred cCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccc
Q 041145 250 PSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQM 329 (522)
Q Consensus 250 p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 329 (522)
T Consensus 176 -------------------------------------------------------------------------------- 175 (297)
T 3fbs_A 176 -------------------------------------------------------------------------------- 175 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcchhhhcccCcEEEEeCceeEEecC-cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccc-ccccc
Q 041145 330 AILPENFFSEAEKGNILFKRASKWWFWSG-GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSG-IMPLY 407 (522)
Q Consensus 330 ~~~~~~~~~~l~~~~v~v~~~~i~~~~~~-~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~-~~~l~ 407 (522)
+++.+.+.+++.+|+++...+.+++++ .|+++||+++++|.||+|||++++..+..-++. ++...+.+ .+.+.
T Consensus 176 --~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~---~~~~~~~G~~i~vd 250 (297)
T 3fbs_A 176 --PDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGC---AVEEGPMGSTIVTD 250 (297)
T ss_dssp --CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTC---CEEEETTEEEECCC
T ss_pred --CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCC---ccccCCCCceEEeC
Confidence 011122344567788887568888877 799999999999999999999998533211111 11101223 44555
Q ss_pred cccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhc
Q 041145 408 RGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 408 ~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~ 445 (522)
.. +.++.||||++|.... +.....|..||+.+|..+.
T Consensus 251 ~~-~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 251 PM-KQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp TT-CBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CC-CccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 44 4578999999998876 5557889999999988774
No 13
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=1e-30 Score=259.61 Aligned_cols=287 Identities=19% Similarity=0.221 Sum_probs=204.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+. .+||.|.... ....++.+ +......++..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 69 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSE----------EVENFPGF-------PEPIAGMELAQ 69 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSCBCHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccc----------ccccCCCC-------CCCCCHHHHHH
Confidence 56999999999999999999 89999999998 7899886421 00011111 12346788999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++.+.++++++ .+.+ ++|++++...+. ...|.|.+.++. ++.||+||+|||..
T Consensus 70 ~l~~~~~~~gv--~~~~-~~v~~i~~~~~~------------------~~~~~v~~~~g~---~~~~~~vv~AtG~~--- 122 (325)
T 2q7v_A 70 RMHQQAEKFGA--KVEM-DEVQGVQHDATS------------------HPYPFTVRGYNG---EYRAKAVILATGAD--- 122 (325)
T ss_dssp HHHHHHHHTTC--EEEE-CCEEEEEECTTS------------------SSCCEEEEESSC---EEEEEEEEECCCEE---
T ss_pred HHHHHHHHcCC--EEEe-eeEEEEEeccCC------------------CceEEEEECCCC---EEEeCEEEECcCCC---
Confidence 99999999887 5555 688888872001 123778776664 79999999999954
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|+..+.+ .....+|+|+|||+|.+|+|+|..|++.+. +||++.|++.+.
T Consensus 123 ~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 123 PRKLGIP---GEDNFWGKGVSTCATCD------GFFYKGKKVVVIGGGDAAVEEGMFLTKFAD-----EVTVIHRRDTLR 188 (325)
T ss_dssp ECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCS-----EEEEECSSSSCC
T ss_pred cCCCCCC---ChhhccCceEEEeccCC------HHHcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEeCCCcCC
Confidence 7788888 88877776667654432 234578999999999999999999988754 599999887521
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
..
T Consensus 189 ~~------------------------------------------------------------------------------ 190 (325)
T 2q7v_A 189 AN------------------------------------------------------------------------------ 190 (325)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhc-ccCcEEEEeCc-eeEEecC----cEEec---CCc--eeeccEEEEeccCCCCccccccCCCcccccc
Q 041145 329 MAILPENFFSEA-EKGNILFKRAS-KWWFWSG----GIEFE---DKS--KLEADVVLLATGYDGKKKLQSILPKPFSSLL 397 (522)
Q Consensus 329 ~~~~~~~~~~~l-~~~~v~v~~~~-i~~~~~~----~v~~~---dG~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~ 397 (522)
..+.+.+ ++.+|+++.+. +.++..+ +|.++ +|+ ++++|.||+|||++++..+.. .. +.
T Consensus 191 -----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~----~~--~~ 259 (325)
T 2q7v_A 191 -----KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVK----DT--VS 259 (325)
T ss_dssp -----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT----TT--SC
T ss_pred -----hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHh----hh--cc
Confidence 0001112 24578888776 7777654 47776 676 689999999999999854321 11 21
Q ss_pred cCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhcC
Q 041145 398 ADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 398 ~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~g 446 (522)
.++++.+.+... +.++.||||++|+.... .....|..||+.+|..+..
T Consensus 260 ~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 260 LRDDGYVDVRDE-IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp BCTTSCBCCBTT-TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccEecCCC-CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 234455666655 44789999999988653 3467899999999987753
No 14
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=6.1e-31 Score=264.97 Aligned_cols=298 Identities=17% Similarity=0.180 Sum_probs=208.8
Q ss_pred cccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHH
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
||+.+||+|||||++|+++|..| .|++|+|||+.+.+||.|.. .+|...+ +.++. -......+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~------~~~~~--------~~~~~~~~ 75 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA-LYPEKHI------YDVAG--------FPEVPAID 75 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-TCTTSEE------CCSTT--------CSSEEHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc-cCCCccc------ccCCC--------CCCCCHHH
Confidence 44467999999999999999999 89999999999999999964 3433211 11111 01235678
Q ss_pred HHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 86 LLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 86 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+..++...++++++ .+.++++|+.++. +. ++.|.|++.++. ++.||+||+|||..
T Consensus 76 ~~~~l~~~~~~~~~--~~~~~~~v~~i~~--~~------------------~~~~~v~~~~g~---~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 76 LVESLWAQAERYNP--DVVLNETVTKYTK--LD------------------DGTFETRTNTGN---VYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHTTCC--EEECSCCEEEEEE--CT------------------TSCEEEEETTSC---EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCC--EEEcCCEEEEEEE--CC------------------CceEEEEECCCc---EEEeeEEEEccCCC
Confidence 88999999988887 6888999999987 31 346888876553 79999999999976
Q ss_pred CCCCCCCCCCCCCC-ccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 166 GDIPRMPAFPANKG-EEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 166 s~~p~~p~~p~~~G-~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
+..|..|++| | .+.+.+..+|.. +.+ ...+.+++|+|||+|.+|+|+|..|++.+ .+|+++.|+
T Consensus 131 ~~~~~~~~i~---g~~~~~~~~~v~~~-~~~------~~~~~~~~vvVvG~G~~g~e~A~~l~~~g-----~~V~lv~~~ 195 (360)
T 3ab1_A 131 AFEPRKLPQL---GNIDHLTGSSVYYA-VKS------VEDFKGKRVVIVGGGDSALDWTVGLIKNA-----ASVTLVHRG 195 (360)
T ss_dssp SCCBCCCGGG---CCCTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTS-----SEEEEECSS
T ss_pred cCCCCCCCCC---CchhhCcCceEEEe-cCC------HHHcCCCcEEEECCCHHHHHHHHHHHhcC-----CEEEEEEcC
Confidence 4468888888 8 777776544433 333 23467899999999999999999998875 459999988
Q ss_pred CceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccc
Q 041145 245 LHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDY 324 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 324 (522)
+.+. +. |
T Consensus 196 ~~~~-~~------~------------------------------------------------------------------ 202 (360)
T 3ab1_A 196 HEFQ-GH------G------------------------------------------------------------------ 202 (360)
T ss_dssp SSCS-SC------S------------------------------------------------------------------
T ss_pred CCCC-CC------H------------------------------------------------------------------
Confidence 7521 00 0
Q ss_pred ccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEec--CC--ceeeccEEEEeccCCCCccccccCCCccc
Q 041145 325 ASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFE--DK--SKLEADVVLLATGYDGKKKLQSILPKPFS 394 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~--dG--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~ 394 (522)
.+.+.+.+.+++.+|+++.+. +.++..+ +|.+. +| +++++|.||+|||++++..+..-++
T Consensus 203 ------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~---- 272 (360)
T 3ab1_A 203 ------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWD---- 272 (360)
T ss_dssp ------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSS----
T ss_pred ------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhc----
Confidence 000111233446678888885 7777653 57775 78 4689999999999999853321111
Q ss_pred ccccCcccccccccccccCCCCceeEeecccc----cchhhHHHHHHHHHHHHhcC
Q 041145 395 SLLADSSGIMPLYRGTIHPLIPNMAFVGYIET----VSNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 395 ~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~----~~~~~~ae~qa~~~a~~l~g 446 (522)
+.. .++.+.+...+ .++.||||++|+... ......|..||+.+|..+.+
T Consensus 273 -~~~-~~g~i~vd~~~-~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 273 -LEL-YENALVVDSHM-KTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp -CCE-ETTEEECCTTS-BCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred -ccc-ccCeeeecCCC-cCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 111 13455555543 468999999998753 23356788888888877653
No 15
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.3e-30 Score=258.13 Aligned_cols=282 Identities=16% Similarity=0.197 Sum_probs=207.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+|||||++|+++|..| .|++|+|||++ +||.|..... . +.++. .......++..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~---~-------~~~~~--------~~~~~~~~~~~ 74 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI---V-------DDYLG--------LIEIQASDMIK 74 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE---E-------CCSTT--------STTEEHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc---c-------cccCC--------CCCCCHHHHHH
Confidence 46999999999999999999 89999999998 9999875110 0 00110 11245788999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
|+.++++++++ .+.+ ++|++++. + .+.|.|++.++. ++.||+||+|||..
T Consensus 75 ~~~~~~~~~~v--~~~~-~~v~~i~~--~-------------------~~~~~v~~~~g~---~~~~d~lvlAtG~~--- 124 (323)
T 3f8d_A 75 VFNKHIEKYEV--PVLL-DIVEKIEN--R-------------------GDEFVVKTKRKG---EFKADSVILGIGVK--- 124 (323)
T ss_dssp HHHHHHHTTTC--CEEE-SCEEEEEE--C---------------------CEEEEESSSC---EEEEEEEEECCCCE---
T ss_pred HHHHHHHHcCC--EEEE-EEEEEEEe--c-------------------CCEEEEEECCCC---EEEcCEEEECcCCC---
Confidence 99999999988 5777 89999987 3 346888876654 79999999999954
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|...+.+ .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 125 ~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~-----~v~~~~~~~~~~ 190 (323)
T 3f8d_A 125 RRKLGVP---GEQEFAGRGISYCSVAD------APLFKNRVVAVIGGGDSALEGAEILSSYST-----KVYLIHRRDTFK 190 (323)
T ss_dssp ECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHHHHSS-----EEEEECSSSSCC
T ss_pred CccCCCC---chhhhcCCceEEeccCC------HhHcCCCEEEEECCCHHHHHHHHHHHHhCC-----eEEEEEeCCCCC
Confidence 7888899 98888777776655443 345678999999999999999999999864 599999887521
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
. .
T Consensus 191 ~-~----------------------------------------------------------------------------- 192 (323)
T 3f8d_A 191 A-Q----------------------------------------------------------------------------- 192 (323)
T ss_dssp S-C-----------------------------------------------------------------------------
T ss_pred c-C-----------------------------------------------------------------------------
Confidence 0 0
Q ss_pred ccccCcchhhh-cccCcEEEEeCc-eeEEecC----cEEecC---Cc--eeeccEEEEeccCCCCccccccCCCcccccc
Q 041145 329 MAILPENFFSE-AEKGNILFKRAS-KWWFWSG----GIEFED---KS--KLEADVVLLATGYDGKKKLQSILPKPFSSLL 397 (522)
Q Consensus 329 ~~~~~~~~~~~-l~~~~v~v~~~~-i~~~~~~----~v~~~d---G~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~ 397 (522)
+.+.+. .++.+|+++.+. +.+++.+ +|++.| |+ ++++|.||+|||++++..+...+ ++.
T Consensus 193 -----~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~-----g~~ 262 (323)
T 3f8d_A 193 -----PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSN-----GIE 262 (323)
T ss_dssp -----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHT-----TCC
T ss_pred -----HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhc-----Cee
Confidence 011111 224588888887 7788765 378876 87 68999999999999985432211 122
Q ss_pred cCcccccccccccccCCCCceeEeecccc----cchhhHHHHHHHHHHHHhc
Q 041145 398 ADSSGIMPLYRGTIHPLIPNMAFVGYIET----VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 398 ~~~~~~~~l~~~~~~~~~pni~~vG~~~~----~~~~~~ae~qa~~~a~~l~ 445 (522)
.++++.+.+... +.++.||||++|.... +.....|..||+.+|..+.
T Consensus 263 ~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 263 TDTNGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp BCTTSSBCCCTT-CBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ecCCCcEecCCC-ceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 234555555553 3468999999998776 3346788899998888774
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=3.2e-31 Score=264.27 Aligned_cols=290 Identities=18% Similarity=0.223 Sum_probs=206.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC----CCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT----NSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~----~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
.++|+|||||++|+++|..| .|++|+|||+. ..+||.|.... .+..+| .. +.+....
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~-------------~~~~~~---~~-~~~~~~~ 84 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT-------------EIENFP---GF-PDGLTGS 84 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS-------------EECCST---TC-TTCEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch-------------hhcccC---CC-cccCCHH
Confidence 46999999999999999999 89999999994 47899887521 011111 00 2345688
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++..|+..+++++++ .+.+++ |++++. + .+.|.+++...++..++.||+||+|||.
T Consensus 85 ~~~~~~~~~~~~~gv--~i~~~~-v~~i~~--~-------------------~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 85 ELMDRMREQSTKFGT--EIITET-VSKVDL--S-------------------SKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHTTC--EEECSC-EEEEEC--S-------------------SSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCC--EEEEeE-EEEEEE--c-------------------CCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 999999999999988 688888 888876 3 3467776632111236899999999995
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
. |+.|.+| |.+.|.+..+|+..+.+.. ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|.
T Consensus 141 ~---~~~~~~~---g~~~~~~~~~~~~~~~~~~----~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~-----~v~~v~~~ 205 (338)
T 3itj_A 141 S---AKRMHLP---GEETYWQKGISACAVCDGA----VPIFRNKPLAVIGGGDSACEEAQFLTKYGS-----KVFMLVRK 205 (338)
T ss_dssp E---ECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSS-----EEEEECSS
T ss_pred C---cCCCCCC---CchhccCccEEEchhcccc----hhhcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEEcC
Confidence 4 7888889 9887766666665433210 114678999999999999999999998754 59999988
Q ss_pred CceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccc
Q 041145 245 LHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDY 324 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 324 (522)
+.+..
T Consensus 206 ~~~~~--------------------------------------------------------------------------- 210 (338)
T 3itj_A 206 DHLRA--------------------------------------------------------------------------- 210 (338)
T ss_dssp SSCCS---------------------------------------------------------------------------
T ss_pred CccCC---------------------------------------------------------------------------
Confidence 75210
Q ss_pred ccccccccCcchhhhcc-cCcEEEEeCc-eeEEecCc-----EEecC-----CceeeccEEEEeccCCCCccccccCCCc
Q 041145 325 ASCQMAILPENFFSEAE-KGNILFKRAS-KWWFWSGG-----IEFED-----KSKLEADVVLLATGYDGKKKLQSILPKP 392 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~-~~~v~v~~~~-i~~~~~~~-----v~~~d-----G~~~~~D~VI~ATG~~~~~~l~~~~~~~ 392 (522)
...+.+.+. ..+|+++.+. +.+++.++ |++++ ++++++|.||+|||++++..+.. .
T Consensus 211 --------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~---~- 278 (338)
T 3itj_A 211 --------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVA---G- 278 (338)
T ss_dssp --------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGB---T-
T ss_pred --------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhh---C-
Confidence 001112232 3478888876 77777654 77776 45689999999999999854332 1
Q ss_pred ccccccCcccccccccccccCCCCceeEeecccc--cchhhHHHHHHHHHHHHhc
Q 041145 393 FSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET--VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~--~~~~~~ae~qa~~~a~~l~ 445 (522)
.+..++++.+.+....+.++.||||++|+... +.....|..||+.+|..+.
T Consensus 279 --~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 279 --QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp --TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred --ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 22223455555444556678999999998874 3456778889888887764
No 17
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.5e-30 Score=257.91 Aligned_cols=284 Identities=18% Similarity=0.204 Sum_probs=203.3
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
..++|+|||||++|+++|..| .|++|+|||+. .+||.|..... ...++.+ +......++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~ 74 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPGF-------RNGITGPELM 74 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTTC-------TTCBCHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCCC-------CCCCCHHHHH
Confidence 357999999999999999999 89999999975 68888754110 0001111 1124567899
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEE-EEEeCCeeEEEEECEEEEeeeccC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEV-AVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
.++.++++++++ .+++++ |++++. + +.|.| .+.++. ++.||+||+|||..
T Consensus 75 ~~l~~~~~~~~v--~~~~~~-v~~i~~--~--------------------~~~~v~~~~~g~---~~~~d~lviAtG~~- 125 (335)
T 2a87_A 75 DEMREQALRFGA--DLRMED-VESVSL--H--------------------GPLKSVVTADGQ---THRARAVILAMGAA- 125 (335)
T ss_dssp HHHHHHHHHTTC--EEECCC-EEEEEC--S--------------------SSSEEEEETTSC---EEEEEEEEECCCEE-
T ss_pred HHHHHHHHHcCC--EEEEee-EEEEEe--C--------------------CcEEEEEeCCCC---EEEeCEEEECCCCC-
Confidence 999999998887 677776 888875 1 35677 655443 79999999999954
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
|..|++| |.+.|.+..+|+..+.+ .....+|+|+|||+|.+|+|+|..|++.+. +||++.|++.
T Consensus 126 --~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-----~V~l~~~~~~ 189 (335)
T 2a87_A 126 --ARYLQVP---GEQELLGRGVSSCATCD------GFFFRDQDIAVIGGGDSAMEEATFLTRFAR-----SVTLVHRRDE 189 (335)
T ss_dssp --ECCCCCT---HHHHTBTTTEESCHHHH------GGGGTTCEEEEECSSHHHHHHHHHHTTTCS-----EEEEECSSSS
T ss_pred --ccCCCCC---chHhccCCceEEeeccc------hhhcCCCEEEEECCCHHHHHHHHHHHHhCC-----eEEEEEcCCc
Confidence 7788888 88777666667654432 223578999999999999999999988754 5999998875
Q ss_pred eeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccc
Q 041145 247 WTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYAS 326 (522)
Q Consensus 247 ~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 326 (522)
+...
T Consensus 190 ~~~~---------------------------------------------------------------------------- 193 (335)
T 2a87_A 190 FRAS---------------------------------------------------------------------------- 193 (335)
T ss_dssp CSSC----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 2110
Q ss_pred ccccccCcchh-hhcccCcEEEEeCc-eeEEecCc----EEec---CC--ceeeccEEEEeccCCCCccccccCCCcccc
Q 041145 327 CQMAILPENFF-SEAEKGNILFKRAS-KWWFWSGG----IEFE---DK--SKLEADVVLLATGYDGKKKLQSILPKPFSS 395 (522)
Q Consensus 327 ~~~~~~~~~~~-~~l~~~~v~v~~~~-i~~~~~~~----v~~~---dG--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~ 395 (522)
+.+. +.+++.+|+++.+. +.+++.++ |.++ +| +++++|.||+|||++++..+.. ..
T Consensus 194 -------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~------~~ 260 (335)
T 2a87_A 194 -------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR------EA 260 (335)
T ss_dssp -------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB------TT
T ss_pred -------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh------cc
Confidence 0011 11235678888776 77777654 7776 46 4689999999999999854321 12
Q ss_pred cccCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhc
Q 041145 396 LLADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 396 ~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~ 445 (522)
+..++++.+.+...++.++.||||++|+.... .....|..|++.+|..+.
T Consensus 261 l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 261 IDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp BCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 22234566666666667889999999988764 335678889998888773
No 18
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=3.3e-30 Score=254.17 Aligned_cols=287 Identities=14% Similarity=0.165 Sum_probs=203.1
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
++|+|||||++|+++|..| .|+ +|+|||++ .+||.|..... ...++.+ +......++..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 63 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPGV-------KEVVSGLDFMQ 63 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTTC-------CSCBCHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCCC-------cccCCHHHHHH
Confidence 4899999999999999999 899 99999995 68888864210 0001111 22456788999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++.+.++++++ .+.+ ++|++++. + .+.|.|++.+++ ++.||+||+|||..
T Consensus 64 ~l~~~~~~~~v--~~~~-~~v~~i~~--~-------------------~~~~~v~~~~g~---~~~~~~vv~AtG~~--- 113 (311)
T 2q0l_A 64 PWQEQCFRFGL--KHEM-TAVQRVSK--K-------------------DSHFVILAEDGK---TFEAKSVIIATGGS--- 113 (311)
T ss_dssp HHHHHHHTTSC--EEEC-SCEEEEEE--E-------------------TTEEEEEETTSC---EEEEEEEEECCCEE---
T ss_pred HHHHHHHHcCC--EEEE-EEEEEEEE--c-------------------CCEEEEEEcCCC---EEECCEEEECCCCC---
Confidence 99999988887 5665 78888876 2 245777765553 79999999999954
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|+..+.+ .....+|+|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 114 ~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 114 PKRTGIK---GESEYWGKGVSTCATCD------GFFYKNKEVAVLGGGDTAVEEAIYLANICK-----KVYLIHRRDGFR 179 (311)
T ss_dssp ECCCCCB---THHHHBTTTEESCHHHH------GGGGTTSEEEEECCSHHHHHHHHHHHTTSS-----EEEEECSSSSCC
T ss_pred CCCCCCC---ChhhccCCcEEEeecCC------hhhcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEeeCCccC
Confidence 7888888 98877766666654432 234578999999999999999999998754 599999887521
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
.
T Consensus 180 ---~---------------------------------------------------------------------------- 180 (311)
T 2q0l_A 180 ---C---------------------------------------------------------------------------- 180 (311)
T ss_dssp ---S----------------------------------------------------------------------------
T ss_pred ---C----------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccCcchhhhc-ccCcEEEEeCc-eeEEecC-----cEEec---CCc--eeeccEEEEeccCCCCccccccCCCccccc
Q 041145 329 MAILPENFFSEA-EKGNILFKRAS-KWWFWSG-----GIEFE---DKS--KLEADVVLLATGYDGKKKLQSILPKPFSSL 396 (522)
Q Consensus 329 ~~~~~~~~~~~l-~~~~v~v~~~~-i~~~~~~-----~v~~~---dG~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~ 396 (522)
++.+.+.+ ++.+|+++.+. +.++..+ +|.++ +|+ ++++|.||+|||++++..+....+.. .++
T Consensus 181 ----~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~-~~l 255 (311)
T 2q0l_A 181 ----APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNS-MLC 255 (311)
T ss_dssp ----CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSC-BSS
T ss_pred ----CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhccccc-cee
Confidence 00011122 23578888775 7777643 46776 676 58999999999999985433211100 012
Q ss_pred ccCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhc
Q 041145 397 LADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~ 445 (522)
..++.+.+.+... +.++.||||++|..... .....|..||+.+|..+.
T Consensus 256 ~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 256 KCDEYGSIVVDFS-MKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp CBCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EeccCCCEEeCCc-cccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 2234455666655 34689999999988763 346789999999998774
No 19
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=1.2e-29 Score=250.18 Aligned_cols=289 Identities=16% Similarity=0.187 Sum_probs=207.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEE-EccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLV-FEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v-~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||||++|+++|..| .|++|+| +|+ +.+||.|..... +..+|. . +......++.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~-------------~~~~~~---~-~~~~~~~~~~ 65 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE-------------IENYPG---V-AQVMDGISFM 65 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC-------------BCCSTT---C-CSCBCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece-------------eccCCC---C-CCCCCHHHHH
Confidence 35999999999999999999 8999999 999 678999865210 001110 1 2345788999
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.|+..+++++++ .++++ +|+++ . +.. .+.|.+++..++ ++.||+||+|||.
T Consensus 66 ~~~~~~~~~~~v--~~~~~-~v~~i-~--~~~-----------------~~~~~v~~~~~~---~~~~d~lvlAtG~--- 116 (315)
T 3r9u_A 66 APWSEQCMRFGL--KHEMV-GVEQI-L--KNS-----------------DGSFTIKLEGGK---TELAKAVIVCTGS--- 116 (315)
T ss_dssp HHHHHHHTTTCC--EEECC-CEEEE-E--ECT-----------------TSCEEEEETTSC---EEEEEEEEECCCE---
T ss_pred HHHHHHHHHcCc--EEEEE-EEEEE-e--cCC-----------------CCcEEEEEecCC---EEEeCEEEEeeCC---
Confidence 999999999987 57666 88888 5 311 246776454443 7899999999995
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCce
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~ 247 (522)
.|+.|++| |.+.|.+..+|+..+.. .....+++|+|||+|.+|+|+|..+++.+. +|+++.|++.+
T Consensus 117 ~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~g~~~~e~a~~l~~~g~-----~v~~~~~~~~~ 182 (315)
T 3r9u_A 117 APKKAGFK---GEDEFFGKGVSTCATCD------GFFYKNKEVAVLGGGDTALEEALYLANICS-----KIYLIHRRDEF 182 (315)
T ss_dssp EECCCCCB---TTTTTBTTTEESCHHHH------GGGGTTSEEEEECCBHHHHHHHHHHHTTSS-----EEEEECSSSSC
T ss_pred CCCCCCCC---ChhhcCCCeEEeeeccc------ccccCcCEEEEECCCHHHHHHHHHHHhhCC-----EEEEEEeCCCC
Confidence 48888899 99888887788776644 334678999999999999999999998754 59999988753
Q ss_pred eecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccc
Q 041145 248 TLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASC 327 (522)
Q Consensus 248 ~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 327 (522)
. .. ....
T Consensus 183 ~--~~---------------------------------------~~~~-------------------------------- 189 (315)
T 3r9u_A 183 R--AA---------------------------------------PSTV-------------------------------- 189 (315)
T ss_dssp B--SC---------------------------------------HHHH--------------------------------
T ss_pred C--CC---------------------------------------HHHH--------------------------------
Confidence 1 00 0000
Q ss_pred cccccCcchhhhcccCcEEEEeCc-eeEEecCc-----EEec--CCc--eeeccEEEEeccCCCCccccccCCCcccc-c
Q 041145 328 QMAILPENFFSEAEKGNILFKRAS-KWWFWSGG-----IEFE--DKS--KLEADVVLLATGYDGKKKLQSILPKPFSS-L 396 (522)
Q Consensus 328 ~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~-----v~~~--dG~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~-~ 396 (522)
.+.+++.+|+++.+. +.++..++ |++. +|+ ++++|.||+|||++++..+.... +..+ +
T Consensus 190 ---------~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~--~~~g~l 258 (315)
T 3r9u_A 190 ---------EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQD--DSKFLC 258 (315)
T ss_dssp ---------HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCT--TSCBSS
T ss_pred ---------HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcc--ccccee
Confidence 011236678888776 77776543 7776 886 68999999999999986443210 0011 2
Q ss_pred ccCcccccccccccccCCCCceeEeecccc--cchhhHHHHHHHHHHHHhc
Q 041145 397 LADSSGIMPLYRGTIHPLIPNMAFVGYIET--VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~~pni~~vG~~~~--~~~~~~ae~qa~~~a~~l~ 445 (522)
..++++.+.+... +.++.||||++|...+ +.....|..|++.+|..+.
T Consensus 259 ~~~~~g~i~vd~~-~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 259 NMEEGGQVSVDLK-MQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CBCTTSCBCCCTT-CBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eecCCCcEEeCCC-cccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 2234455666554 4468999999998853 3456788899999988774
No 20
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=9.8e-30 Score=251.73 Aligned_cols=286 Identities=18% Similarity=0.246 Sum_probs=200.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+. .+||.|..... ...++.+ +......++..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 66 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPGD-------PNDLTGPLLME 66 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTTC-------CSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCCC-------CCCCCHHHHHH
Confidence 56999999999999999999 79999999974 68887753110 0001111 12245678899
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++...++++++ .+.+++ |+.++. + .+.|.| +.++. ++.||+||+|||..
T Consensus 67 ~~~~~~~~~~~--~~~~~~-v~~i~~--~-------------------~~~~~v-~~~~~---~~~~~~lv~AtG~~--- 115 (320)
T 1trb_A 67 RMHEHATKFET--EIIFDH-INKVDL--Q-------------------NRPFRL-NGDNG---EYTCDALIIATGAS--- 115 (320)
T ss_dssp HHHHHHHHTTC--EEECCC-EEEEEC--S-------------------SSSEEE-EESSC---EEEEEEEEECCCEE---
T ss_pred HHHHHHHHCCC--EEEEee-eeEEEe--c-------------------CCEEEE-EeCCC---EEEcCEEEECCCCC---
Confidence 99999998887 577675 888875 3 346777 55543 78999999999954
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|..|++| |.+.|.+..+|+..+.+ .....+++|+|||+|.+|+|+|..|++.+. +||++.|++.+.
T Consensus 116 ~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~ 181 (320)
T 1trb_A 116 ARYLGLP---SEEAFKGRGVSACATSD------GFFYRNQKVAVIGGGNTAVEEALYLSNIAS-----EVHLIHRRDGFR 181 (320)
T ss_dssp ECCCCCH---HHHHTBTTTEESCHHHH------GGGGTTSEEEEECSSHHHHHHHHHHTTTSS-----EEEEECSSSSCC
T ss_pred cCCCCCC---ChHHhCCceeEecccCC------ccccCCCeEEEECCCHHHHHHHHHHHhcCC-----eEEEEEeCCccc
Confidence 7788888 88777666666554432 223578999999999999999999998754 599999887531
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
... .
T Consensus 182 ~~~------------------------------------------~---------------------------------- 185 (320)
T 1trb_A 182 AEK------------------------------------------I---------------------------------- 185 (320)
T ss_dssp CCH------------------------------------------H----------------------------------
T ss_pred cCH------------------------------------------H----------------------------------
Confidence 100 0
Q ss_pred ccccCcchhhhcccCcEEEEeCc-eeEEecCc-----EEecC----C--ceeeccEEEEeccCCCCccccccCCCccccc
Q 041145 329 MAILPENFFSEAEKGNILFKRAS-KWWFWSGG-----IEFED----K--SKLEADVVLLATGYDGKKKLQSILPKPFSSL 396 (522)
Q Consensus 329 ~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~-----v~~~d----G--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~ 396 (522)
+.+.+.+.+++.+|+++.+. +.++..++ |++++ | +++++|.||+|||++++..+.. . .+
T Consensus 186 ---~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~---~---~l 256 (320)
T 1trb_A 186 ---LIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE---G---QL 256 (320)
T ss_dssp ---HHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT---T---TS
T ss_pred ---HHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc---c---cc
Confidence 00111233446788988876 77876554 77775 5 4689999999999999854321 1 12
Q ss_pred ccCccccccccccc----ccCCCCceeEeecccccc--hhhHHHHHHHHHHHHhc
Q 041145 397 LADSSGIMPLYRGT----IHPLIPNMAFVGYIETVS--NLQIAEIRCKWLARLAD 445 (522)
Q Consensus 397 ~~~~~~~~~l~~~~----~~~~~pni~~vG~~~~~~--~~~~ae~qa~~~a~~l~ 445 (522)
..+ ++.+.+...+ ..++.||||++|+..... ....|..|++.+|..+.
T Consensus 257 ~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 257 ELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp CEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred ccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 223 4555555543 467899999999876642 45678888888887664
No 21
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=1.6e-29 Score=249.02 Aligned_cols=284 Identities=15% Similarity=0.139 Sum_probs=202.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
+||+|||||++|+++|..| .|++|+|||+ .+||.|... + + +..++ ...+....++..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~-~-~-----------~~~~~-----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDT-V-D-----------IENYI-----SVPKTEGQKLAGA 61 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGC-C-E-----------ECCBT-----TBSSEEHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccc-c-c-----------ccccc-----CcCCCCHHHHHHH
Confidence 4899999999999999999 7999999986 479988641 0 0 00000 0224567789999
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCCC
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDIP 169 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p 169 (522)
+..+++++++ .+.++++|+.++. +.. ..+.|.|++.++. ++.||+||+|||.. |
T Consensus 62 ~~~~~~~~~v--~~~~~~~v~~i~~--~~~----------------~~~~~~v~~~~g~---~~~~~~lv~AtG~~---~ 115 (310)
T 1fl2_A 62 LKVHVDEYDV--DVIDSQSASKLIP--AAV----------------EGGLHQIETASGA---VLKARSIIVATGAK---W 115 (310)
T ss_dssp HHHHHHTSCE--EEECSCCEEEEEC--CSS----------------TTCCEEEEETTSC---EEEEEEEEECCCEE---E
T ss_pred HHHHHHHcCC--eEEccCEEEEEEe--ccc----------------CCceEEEEECCCC---EEEeCEEEECcCCC---c
Confidence 9999998887 6888889999976 211 0246888876654 78999999999965 6
Q ss_pred CCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceee
Q 041145 170 RMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTL 249 (522)
Q Consensus 170 ~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~ 249 (522)
..|++| |.+.|.+..+|+..+.. ...+.+|+|+|||+|.+|+|+|..|++.+. +||++.|.+.+.
T Consensus 116 ~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~- 180 (310)
T 1fl2_A 116 RNMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVE-----HVTLLEFAPEMK- 180 (310)
T ss_dssp CCCCCT---TTTTTBTTTEESCHHHH------GGGGBTCEEEEECCSHHHHHHHHHHHTTBS-----EEEEECSSSSCC-
T ss_pred CCCCCC---ChhhcccceeEEeccCc------HhhcCCCEEEEECCCHHHHHHHHHHHHhCC-----EEEEEEeCcccC-
Confidence 778888 88877666566544321 234578999999999999999999998754 599999887531
Q ss_pred cCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccc
Q 041145 250 PSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQM 329 (522)
Q Consensus 250 p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 329 (522)
.+
T Consensus 181 --~~---------------------------------------------------------------------------- 182 (310)
T 1fl2_A 181 --AD---------------------------------------------------------------------------- 182 (310)
T ss_dssp --SC----------------------------------------------------------------------------
T ss_pred --cc----------------------------------------------------------------------------
Confidence 00
Q ss_pred cccCcchhhhccc-CcEEEEeCc-eeEEecC-----cEEecC---Cc--eeeccEEEEeccCCCCccccccCCCcccccc
Q 041145 330 AILPENFFSEAEK-GNILFKRAS-KWWFWSG-----GIEFED---KS--KLEADVVLLATGYDGKKKLQSILPKPFSSLL 397 (522)
Q Consensus 330 ~~~~~~~~~~l~~-~~v~v~~~~-i~~~~~~-----~v~~~d---G~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~ 397 (522)
+.+.+.+++ .+|+++.+. +.++.++ +|++++ |+ ++++|.||+|||++++..+. .. .+.
T Consensus 183 ----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l---~~---~l~ 252 (310)
T 1fl2_A 183 ----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL---EG---AVE 252 (310)
T ss_dssp ----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG---TT---TSC
T ss_pred ----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHH---hc---ccc
Confidence 001122223 578888775 7777654 467764 54 58899999999999985332 11 122
Q ss_pred cCcccccccccccccCCCCceeEeecccccc--hhhHHHHHHHHHHHHhc
Q 041145 398 ADSSGIMPLYRGTIHPLIPNMAFVGYIETVS--NLQIAEIRCKWLARLAD 445 (522)
Q Consensus 398 ~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~--~~~~ae~qa~~~a~~l~ 445 (522)
.++.+.+.+...+ .++.||||++|+..... ....|..|++.+|..+.
T Consensus 253 ~~~~g~i~vd~~~-~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 253 RNRMGEIIIDAKC-ETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp BCTTSCBCCCTTC-BCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEcCCCC-ccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 2344556666554 47899999999877643 45678889888887764
No 22
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.97 E-value=1.5e-29 Score=251.93 Aligned_cols=285 Identities=17% Similarity=0.185 Sum_probs=198.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEcc----CCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEA----TNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
.++|+|||||++|+++|..| .|++|+|||+ ...+||.|..... ...++.+ +......
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~----------~~~~~~~-------~~~~~~~ 70 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD----------VENFPGF-------PEGILGV 70 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE----------ECCSTTC-------TTCEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc----------cccCCCC-------ccCCCHH
Confidence 56999999999999999999 8999999999 5567777653110 0011111 1123567
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++..++...++++++ .+.+++ |+.++. + .+.|.|++ ++ .++.||+||+|||.
T Consensus 71 ~~~~~l~~~~~~~gv--~~~~~~-v~~i~~--~-------------------~~~~~v~~-~~---~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 71 ELTDKFRKQSERFGT--TIFTET-VTKVDF--S-------------------SKPFKLFT-DS---KAILADAVILAIGA 122 (333)
T ss_dssp HHHHHHHHHHHHTTC--EEECCC-CCEEEC--S-------------------SSSEEEEC-SS---EEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHCCC--EEEEeE-EEEEEE--c-------------------CCEEEEEE-CC---cEEEcCEEEECCCC
Confidence 888999998988887 577776 888876 3 34677876 43 37899999999996
Q ss_pred cCCCCCCCCCCCCCCccc----cCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEE
Q 041145 165 FGDIPRMPAFPANKGEEI----FGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTM 240 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~----f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~ 240 (522)
. |..|++| |.+. |.+..+|+..+.+.. .....+|+|+|||+|.+|+|+|..|++.+. +|++
T Consensus 123 ~---~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~V~l 187 (333)
T 1vdc_A 123 V---AKRLSFV---GSGEVLGGFWNRGISACAVCDGA----APIFRNKPLAVIGGGDSAMEEANFLTKYGS-----KVYI 187 (333)
T ss_dssp E---ECCCCCB---TCSSSSSCCBTTTEESCHHHHTT----SGGGTTSEEEEECCSHHHHHHHHHHTTTSS-----EEEE
T ss_pred C---cCCCCCC---CccccccccccCcEEEeccCccc----hhhcCCCeEEEECCChHHHHHHHHHHhcCC-----eEEE
Confidence 5 6778888 8766 655666655432210 111578999999999999999999988754 5999
Q ss_pred EeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcc
Q 041145 241 VIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPF 320 (522)
Q Consensus 241 v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 320 (522)
+.|++.+...
T Consensus 188 v~~~~~~~~~---------------------------------------------------------------------- 197 (333)
T 1vdc_A 188 IHRRDAFRAS---------------------------------------------------------------------- 197 (333)
T ss_dssp ECSSSSCCSC----------------------------------------------------------------------
T ss_pred EecCCcCCcc----------------------------------------------------------------------
Confidence 9988752100
Q ss_pred ccccccccccccCcchh-hhcccCcEEEEeCc-eeEEecCc-------EEec---CC--ceeeccEEEEeccCCCCcccc
Q 041145 321 EEDYASCQMAILPENFF-SEAEKGNILFKRAS-KWWFWSGG-------IEFE---DK--SKLEADVVLLATGYDGKKKLQ 386 (522)
Q Consensus 321 ~~~~~~~~~~~~~~~~~-~~l~~~~v~v~~~~-i~~~~~~~-------v~~~---dG--~~~~~D~VI~ATG~~~~~~l~ 386 (522)
+.+. +.+++.+|+++.+. +.++..++ |.++ +| +++++|.||+|||++++..+.
T Consensus 198 -------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 198 -------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL 264 (333)
T ss_dssp -------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG
T ss_pred -------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh
Confidence 0000 12345678888775 77776543 7776 46 458999999999999996433
Q ss_pred ccCCCcccccccCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHh
Q 041145 387 SILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLA 444 (522)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l 444 (522)
. . .+..++++.+.+...++.++.||||++|+.... .....|..|++.+|..+
T Consensus 265 ~---~---~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 265 D---G---GVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp T---T---SSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred h---c---cccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 1 1 222234566666666667889999999988654 34566777877777655
No 23
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=2.5e-29 Score=248.86 Aligned_cols=282 Identities=16% Similarity=0.183 Sum_probs=195.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+|||||++|+++|..| .|++|+|||+ ..+||.|.... . ...++.+ ......++..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~--~--------~~~~~~~--------~~~~~~~~~~ 76 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAP--L--------VENYLGF--------KSIVGSELAK 76 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCS--C--------BCCBTTB--------SSBCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccc--h--------hhhcCCC--------cccCHHHHHH
Confidence 57999999999999999999 8999999999 46888876411 0 0011111 1245678888
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++.+.++++++ .+.+ .+|+.++. + .+.|.|.+ ++. ++.||+||+|||..
T Consensus 77 ~~~~~~~~~~v--~~~~-~~v~~i~~--~-------------------~~~~~v~~-~~~---~~~~~~li~AtG~~--- 125 (319)
T 3cty_A 77 LFADHAANYAK--IREG-VEVRSIKK--T-------------------QGGFDIET-NDD---TYHAKYVIITTGTT--- 125 (319)
T ss_dssp HHHHHHHTTSE--EEET-CCEEEEEE--E-------------------TTEEEEEE-SSS---EEEEEEEEECCCEE---
T ss_pred HHHHHHHHcCC--EEEE-eeEEEEEE--e-------------------CCEEEEEE-CCC---EEEeCEEEECCCCC---
Confidence 99888888876 4555 68888876 2 23567765 332 68999999999954
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|.....+ .....+|+|+|||+|.+|+|+|..|++.+. +|+++.|.+.+.
T Consensus 126 ~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~-----~V~~i~~~~~~~ 191 (319)
T 3cty_A 126 HKHLGVK---GESEYFGKGTSYCSTCD------GYLFKGKRVVTIGGGNSGAIAAISMSEYVK-----NVTIIEYMPKYM 191 (319)
T ss_dssp ECCCCCB---TTTTTBTTTEESCHHHH------GGGGBTSEEEEECCSHHHHHHHHHHTTTBS-----EEEEECSSSSCC
T ss_pred cccCCCC---ChHHhCCceEEEEEecc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCC-----cEEEEEcCCccC
Confidence 7788888 88776555555443322 223568999999999999999999998754 599999877521
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
..
T Consensus 192 ~~------------------------------------------------------------------------------ 193 (319)
T 3cty_A 192 CE------------------------------------------------------------------------------ 193 (319)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEec---CCc--eeeccEEEEeccCCCCccccccCCCcccccc
Q 041145 329 MAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFE---DKS--KLEADVVLLATGYDGKKKLQSILPKPFSSLL 397 (522)
Q Consensus 329 ~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~---dG~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~ 397 (522)
+.+.+.+.+.+|+++.+. +.++..+ +|++. +|+ ++++|.||+|||++++..+..- .++.
T Consensus 194 -----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~-----~gl~ 263 (319)
T 3cty_A 194 -----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKD-----SGVK 263 (319)
T ss_dssp -----HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTT-----SCCC
T ss_pred -----HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhh-----cccc
Confidence 001112224456666654 5566543 36665 676 5899999999999998543221 1122
Q ss_pred cCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhc
Q 041145 398 ADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 398 ~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~ 445 (522)
.++++.+.+... +.++.||||++|+.... .....|..||+.+|..+.
T Consensus 264 ~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 264 LDERGYIVVDSR-QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp BCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCccEeCCCC-CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 234455666655 45789999999988654 346778899999888774
No 24
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.96 E-value=1.5e-29 Score=256.14 Aligned_cols=279 Identities=15% Similarity=0.112 Sum_probs=185.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
+.+|+|||||+||+++|..| .+.+|+|||+++.++ |....+ ++ .+. .....+++..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l--~~---~l~----------g~~~~~~l~~ 66 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRL--NE---IIA----------KNKSIDDILI 66 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGH--HH---HHH----------SCCCGGGTBS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChh--hH---HHc----------CCCCHHHccC
Confidence 57999999999999999999 789999999987653 211110 00 000 0011122222
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
+..++.+++++ .++++++|++++. +. ..|++.+++ ++.||+||+|||. .
T Consensus 67 ~~~~~~~~~~i--~~~~~~~V~~id~--~~---------------------~~v~~~~g~---~~~yd~lvlAtG~---~ 115 (385)
T 3klj_A 67 KKNDWYEKNNI--KVITSEFATSIDP--NN---------------------KLVTLKSGE---KIKYEKLIIASGS---I 115 (385)
T ss_dssp SCHHHHHHTTC--EEECSCCEEEEET--TT---------------------TEEEETTSC---EEECSEEEECCCE---E
T ss_pred CCHHHHHHCCC--EEEeCCEEEEEEC--CC---------------------CEEEECCCC---EEECCEEEEecCC---C
Confidence 33444566777 6888999999986 31 257776664 7999999999994 5
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+ .+++...+.+.... ......+|+|+|||+|.+|+|+|..|++.+. +||++.|.+.++
T Consensus 116 p~~p~i~---G~~----~v~~~~~~~d~~~l-~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~-----~Vtvv~~~~~~l 182 (385)
T 3klj_A 116 ANKIKVP---HAD----EIFSLYSYDDALKI-KDECKNKGKAFIIGGGILGIELAQAIIDSGT-----PASIGIILEYPL 182 (385)
T ss_dssp ECCCCCT---TCS----CEECCSSHHHHHHH-HHHHHHHSCEEEECCSHHHHHHHHHHHHHTC-----CEEEECSSSSSC
T ss_pred cCCCCCC---CCC----CeEEeCCHHHHHHH-HHHhhcCCeEEEECCCHHHHHHHHHHHhCCC-----eEEEEEcCCccc
Confidence 8899999 876 34454444331100 0111237999999999999999999999865 499999988632
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
....+ ..+
T Consensus 183 ~~~~~---------------------------------------~~~--------------------------------- 190 (385)
T 3klj_A 183 ERQLD---------------------------------------RDG--------------------------------- 190 (385)
T ss_dssp TTTSC---------------------------------------HHH---------------------------------
T ss_pred hhhcC---------------------------------------HHH---------------------------------
Confidence 11110 001
Q ss_pred ccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCcccccccc
Q 041145 329 MAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLY 407 (522)
Q Consensus 329 ~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 407 (522)
.+.+.+.+++.+|+++.+. +.++ |+++++|.||+|||++++..+..-. ++.. + +++.+.
T Consensus 191 ----~~~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~-----gl~~-~-~gi~vd 250 (385)
T 3klj_A 191 ----GLFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDT-----EIAS-K-RGILVN 250 (385)
T ss_dssp ----HHHHHHHHHTTTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECCGGGTTS-----CCCB-S-SSEEEC
T ss_pred ----HHHHHHHHHhCCCEEEeCCEEEEc---------CeEEecCeEEECcCcccChhhhhhc-----CCCc-C-CCEEEC
Confidence 1111233446678888765 5444 6779999999999999985432111 1211 2 335555
Q ss_pred cccccCCCCceeEeecccc-----cchhhHHHHHHHHHHHHhcCCC
Q 041145 408 RGTIHPLIPNMAFVGYIET-----VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 408 ~~~~~~~~pni~~vG~~~~-----~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
..+ .++.||||++|++.. ...+..|..||+.+|+.+.|+.
T Consensus 251 ~~~-~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 251 DHM-ETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp TTC-BCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCc-ccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 544 468999999997764 3346889999999999999864
No 25
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.96 E-value=6.4e-28 Score=250.20 Aligned_cols=293 Identities=15% Similarity=0.164 Sum_probs=190.9
Q ss_pred CcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
++|+|||||++|+++|..| . +.+|+|||+++.+|.... ..+. +.. ..+....++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--~~~~-----------~~~--------~~~~~~~~~~ 61 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--GLSA-----------YFN--------HTINELHEAR 61 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC-------------------------------------C
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--cchh-----------hhc--------CCCCCHHHhh
Confidence 4899999999999999999 4 899999999987762110 0000 000 0000111111
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.+.....+++++ .++++++|++++. + ...+.++ ...+..++.||+||+||| +
T Consensus 62 ~~~~~~~~~~gi--~~~~~~~V~~id~--~-------------------~~~v~v~--~~~~~~~~~~d~lviAtG---~ 113 (452)
T 3oc4_A 62 YITEEELRRQKI--QLLLNREVVAMDV--E-------------------NQLIAWT--RKEEQQWYSYDKLILATG---A 113 (452)
T ss_dssp CCCHHHHHHTTE--EEECSCEEEEEET--T-------------------TTEEEEE--ETTEEEEEECSEEEECCC---C
T ss_pred cCCHHHHHHCCC--EEEECCEEEEEEC--C-------------------CCEEEEE--ecCceEEEEcCEEEECCC---c
Confidence 112233455666 6778999999986 3 2344443 212235799999999999 5
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCce
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~ 247 (522)
.|..|++| |.+. ..++++..+.+..... .....+|+|+|||+|.+|+|+|..+++.+. +||++.|.+.+
T Consensus 114 ~p~~p~i~---g~~~--~~v~~~~~~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtlv~~~~~~ 182 (452)
T 3oc4_A 114 SQFSTQIR---GSQT--EKLLKYKFLSGALAAV-PLLENSQTVAVIGAGPIGMEAIDFLVKMKK-----TVHVFESLENL 182 (452)
T ss_dssp CBCCCCCB---TTTC--TTEEEGGGCC----CC-HHHHTCSEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSSSS
T ss_pred ccCCCCCC---CCCC--CCEEEeCCHHHHHHHH-HHHhcCCEEEEECCCHHHHHHHHHHHhCCC-----eEEEEEccCcc
Confidence 68999999 8764 3466666554421100 123467999999999999999999999865 59999998863
Q ss_pred eecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccc
Q 041145 248 TLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASC 327 (522)
Q Consensus 248 ~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 327 (522)
+....+ ..
T Consensus 183 l~~~~d---------------------------------------~~--------------------------------- 190 (452)
T 3oc4_A 183 LPKYFD---------------------------------------KE--------------------------------- 190 (452)
T ss_dssp STTTCC---------------------------------------HH---------------------------------
T ss_pred ccccCC---------------------------------------HH---------------------------------
Confidence 211111 00
Q ss_pred cccccCcchhhhcccCcEEEEeCc-eeEEe--cCc--EEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccc
Q 041145 328 QMAILPENFFSEAEKGNILFKRAS-KWWFW--SGG--IEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSG 402 (522)
Q Consensus 328 ~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~--~~~--v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~ 402 (522)
+.+.+.+.+++.+|+++.+. +.+++ +++ |.+++| ++++|.||+|||++++..+. .. . +..++++
T Consensus 191 ----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l---~~-~--~~~~~~g 259 (452)
T 3oc4_A 191 ----MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYL---DK-K--IQRNLDQ 259 (452)
T ss_dssp ----HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSC---CT-T--SCBCTTS
T ss_pred ----HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHH---Hh-h--hccCCCC
Confidence 11122244557789998876 77877 233 566666 89999999999999995432 11 1 2223456
Q ss_pred ccccccccccCCCCceeEeecccccc-----------hhhHHHHHHHHHHHHhcCCC
Q 041145 403 IMPLYRGTIHPLIPNMAFVGYIETVS-----------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 403 ~~~l~~~~~~~~~pni~~vG~~~~~~-----------~~~~ae~qa~~~a~~l~g~~ 448 (522)
.+.+...+ .++.||||++|++.... .++.|..||+.+|..+.|..
T Consensus 260 ~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 260 TIAVDAYL-QTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp CBCCCTTC-BCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred CEEECcCc-cCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 66666554 46899999999876532 46789999999999998763
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.96 E-value=3.3e-27 Score=248.61 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=204.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+|||||++|+++|..| .|++|+|+|+ .+||.|.... +. ..+.. ..+....++..
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~--~~--------~~~~~--------~~~~~~~~l~~ 271 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV--DI--------ENYIS--------VPKTEGQKLAG 271 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS--CB--------CCBTT--------BSSBCHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc--cc--------cccCC--------CCCCCHHHHHH
Confidence 56999999999999999999 8999999987 4899987511 00 00110 12356788999
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++...++++++ .++++++|+.++. +.. ..+.|.|++.++. ++.||+||+|||..
T Consensus 272 ~l~~~~~~~gv--~v~~~~~v~~i~~--~~~----------------~~~~~~V~~~~g~---~~~~d~vVlAtG~~--- 325 (521)
T 1hyu_A 272 ALKAHVSDYDV--DVIDSQSASKLVP--AAT----------------EGGLHQIETASGA---VLKARSIIIATGAK--- 325 (521)
T ss_dssp HHHHHHHTSCE--EEECSCCEEEEEC--CSS----------------TTSCEEEEETTSC---EEEEEEEEECCCEE---
T ss_pred HHHHHHHHcCC--EEEcCCEEEEEEe--ccC----------------CCceEEEEECCCC---EEEcCEEEECCCCC---
Confidence 99999999888 6888999999976 211 0246888886664 79999999999965
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
|+.|++| |.+.|.+..+|...+.+ ...+.+|+|+|||+|.+|+|+|..|++.+. +||++.|.+.+.
T Consensus 326 ~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~-----~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 326 WRNMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVE-----HVTLLEFAPEMK 391 (521)
T ss_dssp ECCCCCT---TTTTTTTTTEECCTTCC------GGGGBTSEEEEECCSHHHHHHHHHHHHHBS-----EEEEECSSSSCC
T ss_pred cCCCCCC---ChhhhcCceEEEeecCc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCC-----EEEEEEeCcccC
Confidence 6778888 98888776566554433 234678999999999999999999999865 599999887532
Q ss_pred ecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccccc
Q 041145 249 LPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQ 328 (522)
Q Consensus 249 ~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 328 (522)
..
T Consensus 392 ~~------------------------------------------------------------------------------ 393 (521)
T 1hyu_A 392 AD------------------------------------------------------------------------------ 393 (521)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhccc-CcEEEEeCc-eeEEecC-----cEEecC---Cc--eeeccEEEEeccCCCCccccccCCCccccc
Q 041145 329 MAILPENFFSEAEK-GNILFKRAS-KWWFWSG-----GIEFED---KS--KLEADVVLLATGYDGKKKLQSILPKPFSSL 396 (522)
Q Consensus 329 ~~~~~~~~~~~l~~-~~v~v~~~~-i~~~~~~-----~v~~~d---G~--~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~ 396 (522)
..+.+.+++ .+|+++.+. +.++..+ +|.+.| |+ ++++|.||+|||++++..+. .. .+
T Consensus 394 -----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l---~~---~l 462 (521)
T 1hyu_A 394 -----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL---EG---AL 462 (521)
T ss_dssp -----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG---TT---TS
T ss_pred -----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH---hh---hh
Confidence 001122334 578888876 7777653 366754 64 58899999999999985332 11 12
Q ss_pred ccCcccccccccccccCCCCceeEeecccccc--hhhHHHHHHHHHHHHhc
Q 041145 397 LADSSGIMPLYRGTIHPLIPNMAFVGYIETVS--NLQIAEIRCKWLARLAD 445 (522)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~--~~~~ae~qa~~~a~~l~ 445 (522)
..++.+.+.+...+ .++.||||++|+..... ....|..|++.+|..+.
T Consensus 463 ~~~~~G~I~Vd~~~-~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 463 ERNRMGEIIIDAKC-ETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp CBCTTSCBCCCTTC-BCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEeCCCC-CCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 22344555555544 36899999999887643 35778888888887663
No 27
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.96 E-value=7.3e-28 Score=236.63 Aligned_cols=284 Identities=15% Similarity=0.126 Sum_probs=181.6
Q ss_pred cccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHH
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.|+.+||+||||||||++||..| .|++|+|||+.. .||.+.. .||+. +. ..-....+
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~-~~~~~--------------~~-----~~~~~~~~ 61 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQ-NSHGF--------------IT-----RDGIKPEE 61 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSS-CBCCS--------------TT-----CTTBCHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeee-ecCCc--------------cC-----CCCCCHHH
Confidence 47789999999999999999999 899999999964 5665543 33321 11 11234566
Q ss_pred HHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 86 LLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 86 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+.+.....+.+++. ...++..++.+.... .+.++|.+.+++ ++.||+||||||
T Consensus 62 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------------------~~~~~v~~~~g~---~~~a~~liiATG-- 114 (304)
T 4fk1_A 62 FKEIGLNEVMKYPS--VHYYEKTVVMITKQS--------------------TGLFEIVTKDHT---KYLAERVLLATG-- 114 (304)
T ss_dssp HHHHHHHHHTTSTT--EEEEECCEEEEEECT--------------------TSCEEEEETTCC---EEEEEEEEECCC--
T ss_pred HHHHHHHHHHhcCC--EEEEeeEEEEeeecC--------------------CCcEEEEECCCC---EEEeCEEEEccC--
Confidence 66665555555543 234455666666522 356777776664 799999999999
Q ss_pred CCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCC-HHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 166 GDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKS-AIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 166 s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~s-g~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
+.|+.|++| |.+.+.++-++.....+ ....++++++|||+|.. ++|+|..+...+. +|+++.|.
T Consensus 115 -s~p~~p~i~---G~~~~~~~~v~~~~~~~------~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~-----~v~i~~~~ 179 (304)
T 4fk1_A 115 -MQEEFPSIP---NVREYYGKSLFSCPYCD------GWELKDQPLIIISENEDHTLHMTKLVYNWST-----DLVIATNG 179 (304)
T ss_dssp -CEEECCSCT---THHHHBTTTEESCHHHH------SGGGTTSCEEEECCSHHHHHHHHHHHTTTCS-----CEEEECSS
T ss_pred -Ccccccccc---Cccccccceeeeccccc------hhHhcCCceeeecCCCchhhhHHHHHHhCCc-----eEEEEecc
Confidence 558999999 98877665554443322 23467889999999976 4677766666544 58888765
Q ss_pred CceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccc
Q 041145 245 LHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDY 324 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 324 (522)
+.+.
T Consensus 180 ~~~~---------------------------------------------------------------------------- 183 (304)
T 4fk1_A 180 NELS---------------------------------------------------------------------------- 183 (304)
T ss_dssp CCCC----------------------------------------------------------------------------
T ss_pred ccch----------------------------------------------------------------------------
Confidence 4310
Q ss_pred ccccccccCcchhhhcccCcEEEEeCceeEEecC-----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccC
Q 041145 325 ASCQMAILPENFFSEAEKGNILFKRASKWWFWSG-----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLAD 399 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~-----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~ 399 (522)
+.+.+.+++.++.++...+..+..+ +|.++||+++++|.+|+++|..++..+..- .++..+
T Consensus 184 ---------~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~-----~g~~~~ 249 (304)
T 4fk1_A 184 ---------QTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQ-----LGCELQ 249 (304)
T ss_dssp ---------HHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHH-----TTCCCC
T ss_pred ---------hhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhh-----cCeEEC
Confidence 0011122233444444444444432 378899999998888887777665322111 122224
Q ss_pred cccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhc
Q 041145 400 SSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 400 ~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~ 445 (522)
+++.+.+...+ .++.||||++|++.+. .....|-.|++.+|..+.
T Consensus 250 ~~G~I~vd~~~-~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 250 SNGTFVIDDFG-RTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp TTSSSCSSTTC-BCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcCC-ccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 45556666554 5789999999987542 235667778888876663
No 28
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.96 E-value=6.2e-28 Score=248.70 Aligned_cols=295 Identities=18% Similarity=0.196 Sum_probs=192.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CC--CCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RH--YDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
++|+|||||+||++||..| .| .+|+|||+++..++.. ++.|.. +.... .+.........
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~--~~l~~~----------~~~~~-~~~~~~~~~~~---- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFAN--CALPYV----------IGEVV-EDRRYALAYTP---- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCG--GGHHHH----------HTTSS-CCGGGTBCCCH----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCc--chhHHH----------HcCCc-cchhhhhhcCH----
Confidence 3799999999999999999 44 6899999987543210 011100 00000 00000011111
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC--eeEEEEECEEEEeeecc
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ--AIQWYGFELLVMCIGKF 165 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~d~vViAtG~~ 165 (522)
+.+.+++++ .++.+++|+.++. +. . .+++.... ...++.||+||||||+
T Consensus 64 ---~~~~~~~~i--~~~~~~~V~~id~--~~-------------------~--~~~~~~~~~~~~~~~~yd~lVIATGs- 114 (437)
T 4eqs_A 64 ---EKFYDRKQI--TVKTYHEVIAIND--ER-------------------Q--TVSVLNRKTNEQFEESYDKLILSPGA- 114 (437)
T ss_dssp ---HHHHHHHCC--EEEETEEEEEEET--TT-------------------T--EEEEEETTTTEEEEEECSEEEECCCE-
T ss_pred ---HHHHHhcCC--EEEeCCeEEEEEc--cC-------------------c--EEEEEeccCCceEEEEcCEEEECCCC-
Confidence 233455666 6788899999976 31 1 34444332 2457899999999994
Q ss_pred CCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 166 GDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 166 s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+.|++| |...|..+.+. +...+.. .....++++|+|||+|.+|+|+|..+++.+. +||++.|.+
T Consensus 115 --~p~~p~i~---g~~~~~~~~~~--~~~~l~~--~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~-----~Vtlv~~~~ 180 (437)
T 4eqs_A 115 --SANSLGFE---SDITFTLRNLE--DTDAIDQ--FIKANQVDKVLVVGAGYVSLEVLENLYERGL-----HPTLIHRSD 180 (437)
T ss_dssp --EECCCCCC---CTTEECCSSHH--HHHHHHH--HHHHHTCCEEEEECCSHHHHHHHHHHHHHTC-----EEEEEESSS
T ss_pred --cccccccc---CceEEeeccHH--HHHHHHH--hhhccCCcEEEEECCccchhhhHHHHHhcCC-----cceeeeeec
Confidence 58888888 75544321111 1111000 0112357899999999999999999999975 499999987
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.. +|..+
T Consensus 181 ~l-l~~~d------------------------------------------------------------------------ 187 (437)
T 4eqs_A 181 KI-NKLMD------------------------------------------------------------------------ 187 (437)
T ss_dssp CC-STTSC------------------------------------------------------------------------
T ss_pred cc-ccccc------------------------------------------------------------------------
Confidence 62 22221
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccccc
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIM 404 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~ 404 (522)
+.+.+.+.+.+++.+|+++.+. +.+++.+.+.+++|+++++|.||+|+|.+|+..+.. ..++..++++.+
T Consensus 188 ----~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~-----~~gl~~~~~G~I 258 (437)
T 4eqs_A 188 ----ADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIE-----SSNIKLDRKGFI 258 (437)
T ss_dssp ----GGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCGGGT-----TSSCCCCTTSCE
T ss_pred ----chhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHH-----hhhhhhccCCcE
Confidence 0112223344556778888887 889999999999999999999999999999853321 112333455666
Q ss_pred ccccccccCCCCceeEeeccccc-----------chhhHHHHHHHHHHHHhcCCCC
Q 041145 405 PLYRGTIHPLIPNMAFVGYIETV-----------SNLQIAEIRCKWLARLADQKFK 449 (522)
Q Consensus 405 ~l~~~~~~~~~pni~~vG~~~~~-----------~~~~~ae~qa~~~a~~l~g~~~ 449 (522)
.+..++ .++.||||++|++.+. ...+.|..||+.+|+.+.|...
T Consensus 259 ~vd~~~-~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~ 313 (437)
T 4eqs_A 259 PVNDKF-ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDT 313 (437)
T ss_dssp ECCTTC-BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTT
T ss_pred ecCCCc-cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 666654 4789999999976432 2357899999999999998743
No 29
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=1.5e-27 Score=248.58 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=141.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CC-----CCcEEEccCCCCCcccCCCcc-CcccccC-----------CCCCcccCCCC-
Q 041145 12 SKIGIIGAGISGIATAKQL--RH-----YDPLVFEATNSIGGVWKHCSF-NSTKLQT-----------PRCDFEFSDYP- 71 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g-----~~v~v~e~~~~~GG~w~~~~~-~~~~~~~-----------~~~~~~~~~~~- 71 (522)
+||+|||||++|+++|..| .| ++|+|||+++.+| |....+ ++..++. |...+.|..+.
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 4899999999999999999 67 9999999999887 655433 3433322 22222222110
Q ss_pred -------CCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCE--EE
Q 041145 72 -------WPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVW--EV 142 (522)
Q Consensus 72 -------~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v 142 (522)
+..+. ..++.+.++.+|+++++++++. .++++++|++++...+. .+.| .|
T Consensus 109 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~~~------------------~~~~~~~V 167 (463)
T 3s5w_A 109 KHDRLVDFINLG-TFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPMLSA------------------GQVEALRV 167 (463)
T ss_dssp HTTCHHHHHHHC-CSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEEET------------------TEEEEEEE
T ss_pred hcCceeeccccc-CCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEecCC------------------CceEEEEE
Confidence 01111 4567899999999999999886 79999999999873110 2345 55
Q ss_pred EEEeCCe-eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCC--ceeeccccCCCchhhhhhccCCCeEEEECCCCCH
Q 041145 143 AVETNQA-IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGG--KVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSA 219 (522)
Q Consensus 143 ~~~~~~~-~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g--~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg 219 (522)
++.++++ .+++.||+||+|||. .|++|+ +++.+.+ .++|+.+|............++|+|+|||+|.||
T Consensus 168 ~~~~g~g~~~~~~~d~lVlAtG~---~p~~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg 239 (463)
T 3s5w_A 168 ISRNADGEELVRTTRALVVSPGG---TPRIPQ-----VFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSA 239 (463)
T ss_dssp EEEETTSCEEEEEESEEEECCCC---EECCCG-----GGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHH
T ss_pred EEecCCCceEEEEeCEEEECCCC---CCCCcc-----hhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhH
Confidence 5556543 347999999999994 477775 2345556 7899988754110000001168999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEeecCceeecC
Q 041145 220 IDLAVECAEANQGPNGQPCTMVIRTLHWTLPS 251 (522)
Q Consensus 220 ~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p~ 251 (522)
+|+|.+|++... +.+||++.|++. ++|.
T Consensus 240 ~e~a~~l~~~~~---~~~Vt~v~r~~~-~~p~ 267 (463)
T 3s5w_A 240 AEAFIDLNDSYP---SVQADMILRASA-LKPA 267 (463)
T ss_dssp HHHHHHHHHHCT---TEEEEEECSSSS-CCBC
T ss_pred HHHHHHHHhcCC---CCeEEEEEeCCC-CcCc
Confidence 999999999832 246999999987 3444
No 30
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.96 E-value=2e-28 Score=255.48 Aligned_cols=303 Identities=17% Similarity=0.183 Sum_probs=181.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| . +++|+|||+++.++ |..+..|.. +.. .+.... ..++...++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~----------~~g-~~~~~~-~~~~~~~~~ 68 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYY----------VSG-EVSNIE-SLQATPYNV 68 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchh----------hcC-CCCchH-Hhccccchh
Confidence 45899999999999999999 4 89999999998764 211111110 000 000000 111222335
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeec
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~ 164 (522)
..+.+.+.+++++ .++++++|+.++. + .. .+.+.+ .+....+.||+||+|||.
T Consensus 69 ~~~~~~~~~~~gi--~~~~~~~V~~id~--~-------------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 69 VRDPEFFRINKDV--EALVETRAHAIDR--A-------------------AH--TVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ------------C--EEECSEEEEEEET--T-------------------TT--EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ccCHHHHhhhcCc--EEEECCEEEEEEC--C-------------------CC--EEEEeecCCCCEEEEECCEEEEeCCC
Confidence 6677777777777 6888999999976 3 22 345544 121347899999999994
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEe
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEA-NQGPNGQPCTMVI 242 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~-~~~~~~~~Vt~v~ 242 (522)
.|..|++| |.+. ..+++...+.+..... ......+|+|+|||+|.+|+|+|..+++. +.+ ||++.
T Consensus 124 ---~p~~p~i~---G~~~--~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~-----Vtlv~ 190 (472)
T 3iwa_A 124 ---KANRPPVE---GMDL--AGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGID-----TTVVE 190 (472)
T ss_dssp ---EECCCSCT---TTTS--BTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCE-----EEEEC
T ss_pred ---CcCCCCCC---CCCC--CCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCc-----EEEEE
Confidence 58888899 8762 2344443332211000 00013479999999999999999999998 764 99999
Q ss_pred ecCceeec-CCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccc
Q 041145 243 RTLHWTLP-SYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFE 321 (522)
Q Consensus 243 R~~~~~~p-~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~ 321 (522)
|.+.+ +| ..+ ..
T Consensus 191 ~~~~~-l~~~~~---------------------------------------~~--------------------------- 203 (472)
T 3iwa_A 191 LADQI-MPGFTS---------------------------------------KS--------------------------- 203 (472)
T ss_dssp SSSSS-STTTSC---------------------------------------HH---------------------------
T ss_pred ccCcc-cccccC---------------------------------------HH---------------------------
Confidence 98752 22 110 00
Q ss_pred cccccccccccCcchhhhcccCcEEEEeCc-eeEEec-Cc---EEecCCceeeccEEEEeccCCCCccccccCCCccccc
Q 041145 322 EDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS-GG---IEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSL 396 (522)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~-~~---v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~ 396 (522)
+.+.+.+.+++.+|+++.+. +.+++. ++ ++++||+++++|.||+|||++++..+..- .++
T Consensus 204 ----------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~-----~gl 268 (472)
T 3iwa_A 204 ----------LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD-----AGL 268 (472)
T ss_dssp ----------HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHH-----HTC
T ss_pred ----------HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHh-----CCc
Confidence 11112234556788888875 778765 33 77889999999999999999998533210 122
Q ss_pred ccCcccccccccccccCCCCceeEeecccc-------c----chhhHHHHHHHHHHHHhcCCC
Q 041145 397 LADSSGIMPLYRGTIHPLIPNMAFVGYIET-------V----SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-------~----~~~~~ae~qa~~~a~~l~g~~ 448 (522)
..++++.+.+...+ .++.||||++|++.. . ...+.|..||+.+|+.+.|+.
T Consensus 269 ~~~~~g~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 269 ELDPRGAIIVDTRM-RTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp CBCTTCCEECCTTC-BCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred cCCCCCCEEECCCc-ccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 22345556666554 468999999997652 1 235789999999999998864
No 31
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.95 E-value=8.7e-28 Score=251.61 Aligned_cols=294 Identities=18% Similarity=0.177 Sum_probs=192.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC---CCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH---YDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g---~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++|+|||||++|+++|..| .| .+|+|||+++.++..+.. .+.. .... .... ++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~--~~~~----------~~~~-~~~~--------~~ 93 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG--MALW----------IGEQ-IAGP--------EG 93 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG--HHHH----------HTTS-SSCS--------GG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc--cchh----------hcCc-cCCH--------HH
Confidence 47999999999999999999 56 999999998766532210 0000 0000 0000 00
Q ss_pred HHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE-eCCeeEEEEECEEEEeeec
Q 041145 86 LLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE-TNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 86 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~d~vViAtG~ 164 (522)
+.......++++++ .++++++|+.++. + .+ .|++. ++ +..++.||+||+|||.
T Consensus 94 ~~~~~~~~~~~~gv--~v~~~~~v~~i~~--~-------------------~~--~v~v~~~g-~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 94 LFYSDKEELESLGA--KVYMESPVQSIDY--D-------------------AK--TVTALVDG-KNHVETYDKLIFATGS 147 (490)
T ss_dssp GBSCCHHHHHHTTC--EEETTCCEEEEET--T-------------------TT--EEEEEETT-EEEEEECSEEEECCCE
T ss_pred hhhcCHHHHHhCCC--EEEeCCEEEEEEC--C-------------------CC--EEEEEeCC-cEEEEECCEEEECCCC
Confidence 00111223445666 5778899999876 3 22 34444 32 1246999999999994
Q ss_pred cCCCCCCCCCCCCCCcc------ccCC---ceeeccccCCCchhhhhhc--cCCCeEEEECCCCCHHHHHHHHHHhcCCC
Q 041145 165 FGDIPRMPAFPANKGEE------IFGG---KVLHSMDYSKLDKEAATEL--LEGKKVAIIGYRKSAIDLAVECAEANQGP 233 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~------~f~g---~~~hs~~~~~~~~~~~~~~--~~~k~V~VIG~G~sg~dia~~l~~~~~~~ 233 (522)
.|..|++| |.+ +|.+ .++++..+.+..... ... ..+|+|+|||+|.+|+|+|..|++.+.
T Consensus 148 ---~p~~p~i~---G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~-- 218 (490)
T 2bc0_A 148 ---QPILPPIK---GAEIKEGSLEFEATLENLQFVKLYQNSADVI-AKLENKDIKRVAVVGAGYIGVELAEAFQRKGK-- 218 (490)
T ss_dssp ---EECCCSCB---TCCBCTTCTTCCBSSTTEEECSSHHHHHHHH-HHTTSTTCCEEEEECCSHHHHHHHHHHHHTTC--
T ss_pred ---CcCCCCCC---CccccccccccccccCCEEEeCCHHHHHHHH-HHhhhcCCceEEEECCCHHHHHHHHHHHHCCC--
Confidence 58888899 876 4532 366655544321100 111 468999999999999999999999864
Q ss_pred CCCcEEEEeecCceeecC-CCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccC
Q 041145 234 NGQPCTMVIRTLHWTLPS-YRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKF 312 (522)
Q Consensus 234 ~~~~Vt~v~R~~~~~~p~-~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
+||++.|.+.++ |+ .+ ..
T Consensus 219 ---~Vtlv~~~~~~l-~~~~~---------------------------------------~~------------------ 237 (490)
T 2bc0_A 219 ---EVVLIDVVDTCL-AGYYD---------------------------------------RD------------------ 237 (490)
T ss_dssp ---EEEEEESSSSTT-TTTSC---------------------------------------HH------------------
T ss_pred ---eEEEEEcccchh-hhHHH---------------------------------------HH------------------
Confidence 599999987522 21 10 00
Q ss_pred CCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecCCceeeccEEEEeccCCCCccccc
Q 041145 313 GLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFEDKSKLEADVVLLATGYDGKKKLQS 387 (522)
Q Consensus 313 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~ATG~~~~~~l~~ 387 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ |.+ ||+++++|.||+|||++++..+.
T Consensus 238 -------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll- 296 (490)
T 2bc0_A 238 -------------------LTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLG- 296 (490)
T ss_dssp -------------------HHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGG-
T ss_pred -------------------HHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHH-
Confidence 11122234557788888886 77887643 444 78889999999999999996432
Q ss_pred cCCCcccccccCcccccccccccccCCCCceeEeeccccc-----------chhhHHHHHHHHHHHHhcCCC
Q 041145 388 ILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-----------SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-----------~~~~~ae~qa~~~a~~l~g~~ 448 (522)
. .. +..++++.+.+...+ .++.||||++|++... ...+.|..||+.+|..+.|..
T Consensus 297 --~-~~--l~~~~~G~I~Vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 297 --N-GK--IDLFRNGAFLVNKRQ-ETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp --T-TC--SCBCTTSCBCCCTTC-BCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred --H-hh--hccCCCCCEEECCCc-ccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 1 11 222345556666654 4589999999987652 235789999999999998764
No 32
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.95 E-value=1.9e-28 Score=262.53 Aligned_cols=296 Identities=15% Similarity=0.211 Sum_probs=200.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| . +++|+|||+++.++ |..+.+. +.... ........+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~lp-----~~~~g--------~~~~~~~~~ 95 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGLP-----YYIGG--------VITERQKLL 95 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHH-----HHHTT--------SSCCGGGGB
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCCc-----hhhcC--------cCCChHHhh
Confidence 56999999999999999999 4 89999999998764 1111100 00000 111223335
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeec
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~ 164 (522)
..+++.+++++++ .++++++|++++. + .. .+.+.+ .+...++.||+||+|||.
T Consensus 96 ~~~~~~~~~~~gi--~v~~~~~V~~id~--~-------------------~~--~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 96 VQTVERMSKRFNL--DIRVLSEVVKINK--E-------------------EK--TITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SSCHHHHHHHTTC--EEECSEEEEEEET--T-------------------TT--EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ccCHHHHHHhcCc--EEEECCEEEEEEC--C-------------------CC--EEEEeecCCCCEEEEeCCEEEECCCC
Confidence 5677888888888 6889999999986 3 22 344443 222347899999999994
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEee
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R 243 (522)
.|..|++| |.+++.+ ++++..+.+..... ......+|+|+|||+|.+|+|+|..+++.+. +||++.|
T Consensus 151 ---~p~~p~i~---G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~-----~Vtlv~~ 218 (588)
T 3ics_A 151 ---KPIVPSIP---GIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGI-----EVTLVEM 218 (588)
T ss_dssp ---EECCCCCT---TTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTC-----EEEEECS
T ss_pred ---CCCCCCCC---CcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCC-----eEEEEec
Confidence 58888899 8844433 44544433211000 0012468999999999999999999999865 5999998
Q ss_pred cCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccc
Q 041145 244 TLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEED 323 (522)
Q Consensus 244 ~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 323 (522)
.+.. +|..+ ..
T Consensus 219 ~~~~-l~~~~---------------------------------------~~----------------------------- 229 (588)
T 3ics_A 219 ANQV-MPPID---------------------------------------YE----------------------------- 229 (588)
T ss_dssp SSSS-CTTSC---------------------------------------HH-----------------------------
T ss_pred CCcc-cccCC---------------------------------------HH-----------------------------
Confidence 8752 22211 00
Q ss_pred cccccccccCcchhhhcccCcEEEEeCc-eeEEec--CcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCc
Q 041145 324 YASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--GGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADS 400 (522)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~ 400 (522)
+.+.+.+.+++.+|+++.+. +.+++. ++|.++||+++++|.||+|||++++..+..- .++..++
T Consensus 230 --------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~-----~g~~~~~ 296 (588)
T 3ics_A 230 --------MAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKG-----AGLALGV 296 (588)
T ss_dssp --------HHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHH-----TTCCBCG
T ss_pred --------HHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHh-----cCceEcC
Confidence 01112233456788888876 788876 5699999999999999999999998533211 1122234
Q ss_pred ccccccccccccCCCCceeEeecccc-----------cchhhHHHHHHHHHHHHhcC
Q 041145 401 SGIMPLYRGTIHPLIPNMAFVGYIET-----------VSNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 401 ~~~~~l~~~~~~~~~pni~~vG~~~~-----------~~~~~~ae~qa~~~a~~l~g 446 (522)
++.+.+...+ .++.||||++|++.. ....+.|..||+.+|+.+.|
T Consensus 297 ~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 297 RGTIKVNEKF-QTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp GGCBCCCTTS-BCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEECCcc-ccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 5556666554 468999999997752 12357899999999999998
No 33
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.95 E-value=1.6e-27 Score=248.14 Aligned_cols=302 Identities=15% Similarity=0.040 Sum_probs=185.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcc-cCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFE-FSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 86 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|+..+......+. +...+. . ........+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~---~-~~~~~~~~~ 79 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN---V-KIPLDFSTV 79 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC---S-CCCCCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc---C-CCCcCHHHH
Confidence 46999999999999999999 899999999999999999742 223221111100000 000000 0 112233333
Q ss_pred HHHH------------HHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEE
Q 041145 87 LDYL------------HGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYG 154 (522)
Q Consensus 87 ~~yl------------~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 154 (522)
..+. ....++.++ .+. ..++..++. ..+.|...+++ ..++.
T Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~v--~~~-~g~v~~id~-----------------------~~~~V~~~~g~-~~~~~ 132 (466)
T 3l8k_A 80 QDRKDYVQELRFKQHKRNMSQYETL--TFY-KGYVKIKDP-----------------------THVIVKTDEGK-EIEAE 132 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTE--EEE-SEEEEEEET-----------------------TEEEEEETTSC-EEEEE
T ss_pred HHHHHhheeccccchHHHHHHhCCC--EEE-EeEEEEecC-----------------------CeEEEEcCCCc-EEEEe
Confidence 3332 222233332 222 235555542 34556554442 22399
Q ss_pred ECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCC
Q 041145 155 FELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPN 234 (522)
Q Consensus 155 ~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~ 234 (522)
||+||+|||. .|+.|++| |.+. ++++.++..... .....+|+|+|||+|.+|+|+|..+++.+.
T Consensus 133 ~d~lviAtG~---~p~~p~i~---G~~~----~~t~~~~~~~~~---~l~~~~~~vvViGgG~~g~e~A~~l~~~g~--- 196 (466)
T 3l8k_A 133 TRYMIIASGA---ETAKLRLP---GVEY----CLTSDDIFGYKT---SFRKLPQDMVIIGAGYIGLEIASIFRLMGV--- 196 (466)
T ss_dssp EEEEEECCCE---EECCCCCT---TGGG----SBCHHHHHSTTC---SCCSCCSEEEEECCSHHHHHHHHHHHHTTC---
T ss_pred cCEEEECCCC---CccCCCCC---Cccc----eEeHHHHHHHHH---HHhhCCCeEEEECCCHHHHHHHHHHHHcCC---
Confidence 9999999994 58899999 8762 445544431100 011357999999999999999999999865
Q ss_pred CCcEEEEeecCceeecCC-CCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCC
Q 041145 235 GQPCTMVIRTLHWTLPSY-RIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFG 313 (522)
Q Consensus 235 ~~~Vt~v~R~~~~~~p~~-~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
+||++.|.+..+ |.. + ..+.+.+.
T Consensus 197 --~Vtlv~~~~~~l-~~~~d---------------------------------------~~~~~~l~------------- 221 (466)
T 3l8k_A 197 --QTHIIEMLDRAL-ITLED---------------------------------------QDIVNTLL------------- 221 (466)
T ss_dssp --EEEEECSSSSSC-TTSCC---------------------------------------HHHHHHHH-------------
T ss_pred --EEEEEEeCCcCC-CCCCC---------------------------------------HHHHHHHH-------------
Confidence 599999987632 221 1 00111111
Q ss_pred CCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec---Cc--EEec--CCc--eeeccEEEEeccCCCCc
Q 041145 314 LKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS---GG--IEFE--DKS--KLEADVVLLATGYDGKK 383 (522)
Q Consensus 314 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~---~~--v~~~--dG~--~~~~D~VI~ATG~~~~~ 383 (522)
+.++ |+++.+. +.+++. ++ |.++ ||+ ++++|.||+|||++++.
T Consensus 222 ------------------------~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 222 ------------------------SILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ------------------------HHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred ------------------------hcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 1111 5555554 566654 23 5666 676 68999999999999985
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcCC
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g~ 447 (522)
.+ .....++..++++ +.+...+. ++.||||++|++.+. ...+.|..||+.+|..+.|.
T Consensus 275 ~l----~l~~~gl~~~~~G-i~vd~~~~-t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 275 PE----GAREIGLSISKTG-IVVDETMK-TNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CT----TTGGGTCCBCSSS-BCCCTTCB-CSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred cc----chhhcCceeCCCC-EeECCCcc-CCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 31 0111122223455 66665544 689999999988763 44688999999999999875
No 34
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.95 E-value=2.7e-28 Score=249.75 Aligned_cols=289 Identities=12% Similarity=0.150 Sum_probs=188.6
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCC--cEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYD--PLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
++|+|||||++|+++|..| .|++ |+|||+++..+ |....+ ++.... + ..... .. ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~l--~~~~~~--g-~~~~~--~~-~~----- 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPSL--SKAVLD--G-SLERP--PI-LA----- 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGGG--GTHHHH--T-SSSSC--CB-SS-----
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCccc--cHHHhC--C-CCCHH--Hh-cC-----
Confidence 4899999999999999999 7776 99999987653 111100 000000 0 00000 00 00
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
...+.+++++ .+.++++|+.++. + .+.|++.+++ ++.||+||+|||.
T Consensus 63 --~~~~~~~~~i--~~~~~~~v~~id~--~---------------------~~~v~~~~g~---~~~~d~lvlAtG~--- 109 (410)
T 3ef6_A 63 --EADWYGEARI--DMLTGPEVTALDV--Q---------------------TRTISLDDGT---TLSADAIVIATGS--- 109 (410)
T ss_dssp --CTTHHHHTTC--EEEESCCEEEEET--T---------------------TTEEEETTSC---EEECSEEEECCCE---
T ss_pred --CHHHHHHCCC--EEEeCCEEEEEEC--C---------------------CCEEEECCCC---EEECCEEEEccCC---
Confidence 1122345566 6888999999976 2 2357776664 7999999999994
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCce
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~ 247 (522)
.|+.|++| |.+. ..+++...+.+... .......+|+|+|||+|.+|+|+|..+++.+. +||++.|.+.+
T Consensus 110 ~p~~~~ip---G~~~--~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtvv~~~~~~ 178 (410)
T 3ef6_A 110 RARTMALP---GSQL--PGVVTLRTYGDVQV-LRDSWTSATRLLIVGGGLIGCEVATTARKLGL-----SVTILEAGDEL 178 (410)
T ss_dssp EECCCCCT---TTTS--TTEECCCSHHHHHH-HHHHCCTTCEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSSSSS
T ss_pred cccCCCCC---Cccc--cceEEeccHHHHHH-HHHHhccCCeEEEECCCHHHHHHHHHHHhCCC-----eEEEEecCCcc
Confidence 48888899 8652 23444333322110 00123458999999999999999999999764 59999998763
Q ss_pred eecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccc
Q 041145 248 TLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASC 327 (522)
Q Consensus 248 ~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 327 (522)
+.... ...
T Consensus 179 l~~~~---------------------------------------~~~--------------------------------- 186 (410)
T 3ef6_A 179 LVRVL---------------------------------------GRR--------------------------------- 186 (410)
T ss_dssp SHHHH---------------------------------------CHH---------------------------------
T ss_pred chhhc---------------------------------------CHH---------------------------------
Confidence 21000 000
Q ss_pred cccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccc
Q 041145 328 QMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSG 402 (522)
Q Consensus 328 ~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~ 402 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||+++++|.||+|||++++..+..-. ++.. + +
T Consensus 187 ----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~-~-~ 255 (410)
T 3ef6_A 187 ----IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQA-----GLAC-D-R 255 (410)
T ss_dssp ----HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT-----TCCB-S-S
T ss_pred ----HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC-----CCcc-C-C
Confidence 11112233456678888776 7888765 4899999999999999999999985432111 1111 1 3
Q ss_pred ccccccccccCCCCceeEeecccccc----------hhhHHHHHHHHHHHHhcCCC
Q 041145 403 IMPLYRGTIHPLIPNMAFVGYIETVS----------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 403 ~~~l~~~~~~~~~pni~~vG~~~~~~----------~~~~ae~qa~~~a~~l~g~~ 448 (522)
++.+...+ .++.||||++|.+.... .++.|..||+.+|+.|.|+.
T Consensus 256 gi~vd~~~-~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 256 GVIVDHCG-ATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp SEECCTTS-BCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred eEEEccCe-eECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 35555544 46899999999765432 25789999999999999874
No 35
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.95 E-value=4.1e-27 Score=246.48 Aligned_cols=305 Identities=16% Similarity=0.132 Sum_probs=195.6
Q ss_pred CCcEEEECCCHHHHHHHHHh-C--CCCcEEEc--------cCCCCCcccCCC-ccCcccccCCCCC----cccCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL-R--HYDPLVFE--------ATNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPE 74 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~--g~~v~v~e--------~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 74 (522)
.+||+|||||++|+++|..| . |++|+||| +...+||+|.+. ++|...+...... ..+..+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 46999999999999999999 5 99999999 356799998752 3343222111100 0112222211
Q ss_pred CCCC-CCCChHHHHHHHHHHHH-----------hc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE
Q 041145 75 RDDA-SFPSHVELLDYLHGYAV-----------HF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE 141 (522)
Q Consensus 75 ~~~~-~~~~~~~~~~yl~~~~~-----------~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (522)
.. . ......++.++.+.+.+ +. ++ .+..+ +++.++. +.
T Consensus 87 ~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~-------------------------~~ 137 (495)
T 2wpf_A 87 DG-SSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLESK-------------------------NV 137 (495)
T ss_dssp CG-GGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEET-------------------------TE
T ss_pred CC-cccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEeeC-------------------------CE
Confidence 10 0 02344555555544433 23 33 23333 3433321 25
Q ss_pred EEEEeCCe-----eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCC
Q 041145 142 VAVETNQA-----IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYR 216 (522)
Q Consensus 142 v~~~~~~~-----~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G 216 (522)
|++.+.++ .+++.||+||+|||. .|..|++| |.+. ++++.++..+. ..+|+|+|||+|
T Consensus 138 v~v~~~~~~~~~~~~~~~~d~lViATGs---~p~~p~i~---G~~~----~~~~~~~~~~~-------~~~~~vvViGgG 200 (495)
T 2wpf_A 138 VVVRETADPKSAVKERLQADHILLATGS---WPQMPAIP---GIEH----CISSNEAFYLP-------EPPRRVLTVGGG 200 (495)
T ss_dssp EEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCCT---TGGG----CEEHHHHTTCS-------SCCSEEEEECSS
T ss_pred EEEeecCCccCCCCeEEEcCEEEEeCCC---CcCCCCCC---Cccc----cccHHHHHhhh-------hcCCeEEEECCC
Confidence 66652111 247999999999994 58888888 8742 45666655431 347899999999
Q ss_pred CCHHHHHHHHHHh---cCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHH
Q 041145 217 KSAIDLAVECAEA---NQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRK 293 (522)
Q Consensus 217 ~sg~dia~~l~~~---~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (522)
.+|+|+|..+++. +. +||++.|.+.. +|..+ .
T Consensus 201 ~ig~E~A~~l~~~~~~g~-----~Vtlv~~~~~~-l~~~d---------------------------------------~ 235 (495)
T 2wpf_A 201 FISVEFAGIFNAYKPPGG-----KVTLCYRNNLI-LRGFD---------------------------------------E 235 (495)
T ss_dssp HHHHHHHHHHHHHCCTTC-----EEEEEESSSSS-CTTSC---------------------------------------H
T ss_pred HHHHHHHHHHHhhCCCCC-----eEEEEEcCCcc-ccccC---------------------------------------H
Confidence 9999999999998 64 59999998752 23221 0
Q ss_pred HHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCce
Q 041145 294 AISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSK 367 (522)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~ 367 (522)
. +.+.+.+.+++.+|+++.+. +.+++.+ .|+++||++
T Consensus 236 ~-------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 278 (495)
T 2wpf_A 236 T-------------------------------------IREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKT 278 (495)
T ss_dssp H-------------------------------------HHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCE
T ss_pred H-------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcE
Confidence 0 01112233456678888886 7777643 377889999
Q ss_pred eeccEEEEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcC
Q 041145 368 LEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 368 ~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g 446 (522)
+++|.||+|||++++... +.....++..++++.+.+...+ .++.||||++|++.+. ...+.|..||+.+|..+.|
T Consensus 279 i~~D~vv~a~G~~p~~~~---L~l~~~gl~~~~~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 279 LDVDVVMMAIGRIPRTND---LQLGNVGVKLTPKGGVQVDEFS-RTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp EEESEEEECSCEEECCGG---GTGGGTTCCBCTTSSBCCCTTC-BCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred EEcCEEEECCCCcccccc---cchhhcCccCCCCCCEEECCCC-ccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 999999999999998531 1111112222345556666554 4689999999988763 3467899999999999987
Q ss_pred C
Q 041145 447 K 447 (522)
Q Consensus 447 ~ 447 (522)
.
T Consensus 355 ~ 355 (495)
T 2wpf_A 355 N 355 (495)
T ss_dssp S
T ss_pred C
Confidence 5
No 36
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=3.6e-27 Score=232.55 Aligned_cols=171 Identities=18% Similarity=0.229 Sum_probs=120.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.+||+||||||||++||..| .|++|+|||+. .+||++.+. +.+ .++. .......++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i~-----------~~p~--------~~~~~~~~~~ 65 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEVE-----------NFPG--------FEMITGPDLS 65 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBC-----------CSTT--------CSSBCHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccccC-----------CcCC--------ccccchHHHH
Confidence 57999999999999999999 89999999985 688887541 111 1111 1234556666
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
........++.. .+..+..+..... . .. .+...++. ++.||+||||||.
T Consensus 66 ~~~~~~~~~~~~--~~~~~~~~~~~~~--~--------------------~~-~~~~~~~~---~~~~d~liiAtGs--- 114 (312)
T 4gcm_A 66 TKMFEHAKKFGA--VYQYGDIKSVEDK--G--------------------EY-KVINFGNK---ELTAKAVIIATGA--- 114 (312)
T ss_dssp HHHHHHHHHTTC--EEEECCCCEEEEC--S--------------------SC-EEEECSSC---EEEEEEEEECCCE---
T ss_pred HHHHHHHhhccc--cccceeeeeeeee--e--------------------cc-eeeccCCe---EEEeceeEEcccC---
Confidence 666555555544 3444444433332 1 11 22233333 7999999999994
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+.|++| |.+.+.++.+++....+ ...+.+|+|+|||+|.+|+|+|..|++.+. +||++.|++.
T Consensus 115 ~~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~vvViGgG~ig~E~A~~l~~~g~-----~Vtlv~~~~~ 179 (312)
T 4gcm_A 115 EYKKIGVP---GEQELGGRGVSYCAVCD------GAFFKNKRLFVIGGGDSAVEEGTFLTKFAD-----KVTIVHRRDE 179 (312)
T ss_dssp EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCS-----EEEEECSSSS
T ss_pred ccCcCCCC---ChhhhCCccEEeeeccC------ccccCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEecccc
Confidence 58899999 99888777666655433 334678999999999999999999998864 5999999875
No 37
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.9e-28 Score=245.43 Aligned_cols=281 Identities=17% Similarity=0.161 Sum_probs=186.1
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
.||+|||||+||+++|..| .| +|+|||+++..+ +.....+.. +.+. ...+++..+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~~~----------~~g~----------~~~~~~~~~ 65 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLSHY----------IAGF----------IPRNRLFPY 65 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHHHH----------HTTS----------SCGGGGCSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhHHH----------HhCC----------CCHHHhccC
Confidence 4899999999999999999 78 999999986542 111111000 0000 111111112
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCCC
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDIP 169 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p 169 (522)
...+.+++++ .+.++++|+.++. + .+.|+ .+++ ++.||+||+|||. .|
T Consensus 66 ~~~~~~~~~v--~~~~g~~v~~id~--~---------------------~~~V~-~~g~---~~~~d~lViATGs---~p 113 (367)
T 1xhc_A 66 SLDWYRKRGI--EIRLAEEAKLIDR--G---------------------RKVVI-TEKG---EVPYDTLVLATGA---RA 113 (367)
T ss_dssp CHHHHHHHTE--EEECSCCEEEEET--T---------------------TTEEE-ESSC---EEECSEEEECCCE---EE
T ss_pred CHHHHHhCCc--EEEECCEEEEEEC--C---------------------CCEEE-ECCc---EEECCEEEECCCC---CC
Confidence 2334456666 6777888988875 2 24566 4443 7999999999994 58
Q ss_pred CCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceee
Q 041145 170 RMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTL 249 (522)
Q Consensus 170 ~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~ 249 (522)
+.|++| |.+ .++++..+.+..... .....+|+|+|||+|.+|+|+|..+++.+. +||++.|.+.. +
T Consensus 114 ~~p~i~---G~~----~v~~~~~~~~~~~l~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtlv~~~~~~-l 179 (367)
T 1xhc_A 114 REPQIK---GKE----YLLTLRTIFDADRIK-ESIENSGEAIIIGGGFIGLELAGNLAEAGY-----HVKLIHRGAMF-L 179 (367)
T ss_dssp CCCCSB---TGG----GEECCCSHHHHHHHH-HHHHHHSEEEEEECSHHHHHHHHHHHHTTC-----EEEEECSSSCC-T
T ss_pred CCCCCC---CcC----CEEEEcCHHHHHHHH-HHhhcCCcEEEECCCHHHHHHHHHHHhCCC-----EEEEEeCCCee-c
Confidence 888899 832 355554443311000 001146899999999999999999999865 59999988752 2
Q ss_pred cCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccc
Q 041145 250 PSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQM 329 (522)
Q Consensus 250 p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 329 (522)
| .+ ..
T Consensus 180 ~-~~---------------------------------------~~----------------------------------- 184 (367)
T 1xhc_A 180 G-LD---------------------------------------EE----------------------------------- 184 (367)
T ss_dssp T-CC---------------------------------------HH-----------------------------------
T ss_pred c-CC---------------------------------------HH-----------------------------------
Confidence 2 10 00
Q ss_pred cccCcchhhhcccCcEEEEeCc-eeEEecCcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccccccccc
Q 041145 330 AILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYR 408 (522)
Q Consensus 330 ~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 408 (522)
+.+.+.+.+++.+|+++.+. +.+++.++|+++||+ +++|.||+|||++++..+..-. ++.. . +.+.+..
T Consensus 185 --~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~-----gl~~-~-~gi~Vd~ 254 (367)
T 1xhc_A 185 --LSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRS-----GIHT-G-RGILIDD 254 (367)
T ss_dssp --HHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECCHHHHHT-----TCCB-S-SSEECCT
T ss_pred --HHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhC-----CCCC-C-CCEEECC
Confidence 01112234556789999886 888887889999998 9999999999999995332111 1111 2 2355555
Q ss_pred ccccCCCCceeEeecccc-----cchhhHHHHHHHHHHHHhcCC
Q 041145 409 GTIHPLIPNMAFVGYIET-----VSNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 409 ~~~~~~~pni~~vG~~~~-----~~~~~~ae~qa~~~a~~l~g~ 447 (522)
.+ .++.||||++|++.. ...++.|..||+.+|+.+.|.
T Consensus 255 ~~-~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 255 NF-RTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp TS-BCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred Cc-ccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 44 468999999998743 134678999999999999875
No 38
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=5.7e-28 Score=253.25 Aligned_cols=310 Identities=17% Similarity=0.108 Sum_probs=187.1
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcc-----cCCCCCCCCCCCCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFE-----FSDYPWPERDDASF 80 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 80 (522)
|..+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. ++|...+..+...+. +..+.+... ...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~--~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA--NPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC--CCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC--CCc
Confidence 3368999999999999999999 899999999999999998752 344333221111111 111111111 111
Q ss_pred CChHHHHHHHH-----------HHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe
Q 041145 81 PSHVELLDYLH-----------GYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA 149 (522)
Q Consensus 81 ~~~~~~~~yl~-----------~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 149 (522)
.....+..+.. ...++.++ .+..+. +..+ + .+.+.|...+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~----~-------------------~~~~~v~~~~g~- 153 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQGT-GKVL----G-------------------QGKVSVTNEKGE- 153 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEEC----S-------------------SSEEEEECTTSC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEE-EEEe----c-------------------CCEEEEEeCCCc-
Confidence 22333333322 22333333 122121 1111 1 233444332221
Q ss_pred eEEEEECEEEEeeeccCCCCCCCCCCCCCCccc-cCCceeecc-ccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHH
Q 041145 150 IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEI-FGGKVLHSM-DYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECA 227 (522)
Q Consensus 150 ~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~-f~g~~~hs~-~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~ 227 (522)
.+++.||+||+|||.. | |.+| |++. +.+..+++. +... ....+|+|+|||+|.+|+|+|..++
T Consensus 154 ~~~~~~d~lViATGs~---p--~~ip---g~~~~~~~~~~~~~~~~~~-------~~~~~~~vvViGgG~~g~E~A~~l~ 218 (491)
T 3urh_A 154 EQVLEAKNVVIATGSD---V--AGIP---GVEVAFDEKTIVSSTGALA-------LEKVPASMIVVGGGVIGLELGSVWA 218 (491)
T ss_dssp EEEEECSEEEECCCEE---C--CCBT---TBCCCCCSSSEECHHHHTS-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred eEEEEeCEEEEccCCC---C--CCCC---CcccccCCeeEEehhHhhh-------hhhcCCeEEEECCCHHHHHHHHHHH
Confidence 3579999999999954 4 3566 7653 444434433 3222 2246799999999999999999999
Q ss_pred HhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcC
Q 041145 228 EANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKL 307 (522)
Q Consensus 228 ~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
+.+. +||++.|.+.. +|..+ ..
T Consensus 219 ~~g~-----~Vtlv~~~~~~-l~~~d---------------------------------------~~------------- 240 (491)
T 3urh_A 219 RLGA-----KVTVVEFLDTI-LGGMD---------------------------------------GE------------- 240 (491)
T ss_dssp HHTC-----EEEEECSSSSS-SSSSC---------------------------------------HH-------------
T ss_pred HcCC-----EEEEEeccccc-cccCC---------------------------------------HH-------------
Confidence 9865 49999988753 22111 00
Q ss_pred CcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--c--EEecC---C--ceeeccEEEEec
Q 041145 308 PLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--G--IEFED---K--SKLEADVVLLAT 377 (522)
Q Consensus 308 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~--v~~~d---G--~~~~~D~VI~AT 377 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ + +.+++ | +++++|.||+||
T Consensus 241 ------------------------~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 241 ------------------------VAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp ------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred ------------------------HHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 11112233456678888775 6676643 2 55653 5 568999999999
Q ss_pred cCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhcCCC
Q 041145 378 GYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 378 G~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
|++++..+ +.....++..++++.+.+...+ .++.||||++|++.+ +...+.|..|++.+|+.+.|+.
T Consensus 297 G~~p~~~~---l~l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 297 GRKPSTDG---LGLAKAGVVLDSRGRVEIDRHF-QTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp CCEECCTT---SCHHHHTCCBCTTSCBCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCccCCCc---cCchhcCceECCCCCEeECCCC-CCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 99998532 1111112222345556666554 468999999998774 3446889999999999998864
No 39
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.95 E-value=2.2e-27 Score=243.59 Aligned_cols=291 Identities=16% Similarity=0.133 Sum_probs=188.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCC--cEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYD--PLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .|++ |+|||+++.++ |....+ ++..+ .......++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~~------------~~~~~~~~~ 67 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIP-------YERPPL--SKEYL------------AREKTFERI 67 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCC-------BCSGGG--GTTTT------------TTSSCSGGG
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCC-------cCcccC--CHHHH------------cCCCCHHHh
Confidence 46999999999999999999 6776 99999987542 111100 00000 000011111
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
..+...+.++.++ .+.++++|+.++. + .+.|++.++. .+.||+||+|||.
T Consensus 68 ~~~~~~~~~~~~i--~~~~~~~v~~id~--~---------------------~~~v~~~~g~---~~~~d~lvlAtG~-- 117 (415)
T 3lxd_A 68 CIRPAQFWEDKAV--EMKLGAEVVSLDP--A---------------------AHTVKLGDGS---AIEYGKLIWATGG-- 117 (415)
T ss_dssp BSSCHHHHHHTTE--EEEETCCEEEEET--T---------------------TTEEEETTSC---EEEEEEEEECCCE--
T ss_pred ccCCHHHHHHCCc--EEEeCCEEEEEEC--C---------------------CCEEEECCCC---EEEeeEEEEccCC--
Confidence 1222334455666 6788889999875 2 2357776654 7999999999994
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccC-CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLE-GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~-~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+.|++| |.+. ..+++.....+... ....... +++|+|||+|.+|+|+|..+++.+. +||++.|.+
T Consensus 118 -~~~~~~i~---g~~~--~~v~~~~~~~d~~~-l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~-----~Vtvv~~~~ 185 (415)
T 3lxd_A 118 -DPRRLSCV---GADL--AGVHAVRTKEDADR-LMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGV-----NVTLLEALP 185 (415)
T ss_dssp -ECCCCBTT---SSCC--BTEECCCSHHHHHH-HHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSS
T ss_pred -ccCCCCCC---Cccc--cCEEEEcCHHHHHH-HHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCC-----eEEEEecCC
Confidence 58888888 8652 12222222111100 0011223 8999999999999999999999865 599999987
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.++ ++.. ...
T Consensus 186 ~~l-~~~~--------------------------------------~~~------------------------------- 195 (415)
T 3lxd_A 186 RVL-ARVA--------------------------------------GEA------------------------------- 195 (415)
T ss_dssp STT-TTTS--------------------------------------CHH-------------------------------
T ss_pred chh-hhhc--------------------------------------CHH-------------------------------
Confidence 632 1100 000
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccC
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLAD 399 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~ 399 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||+++++|.||+|||++++..+..-. ++..
T Consensus 196 ------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~- 263 (415)
T 3lxd_A 196 ------LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA-----GASG- 263 (415)
T ss_dssp ------HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHT-----TCCC-
T ss_pred ------HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC-----CCCc-
Confidence 11112234556788888876 7787753 4889999999999999999999985432111 1111
Q ss_pred cccccccccccccCCCCceeEeecccccc------------hhhHHHHHHHHHHHHhcCCC
Q 041145 400 SSGIMPLYRGTIHPLIPNMAFVGYIETVS------------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 400 ~~~~~~l~~~~~~~~~pni~~vG~~~~~~------------~~~~ae~qa~~~a~~l~g~~ 448 (522)
. +++.+..++ .++.||||++|.+.... .++.|..||+.+|+.|.|+.
T Consensus 264 ~-~gi~vd~~~-~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 264 G-NGVDVDEFC-RTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp S-SSEECCTTC-BCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred C-CCEEECCCC-CcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 2 235555544 46899999999765432 24789999999999999864
No 40
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.95 E-value=3.2e-27 Score=249.04 Aligned_cols=304 Identities=16% Similarity=0.177 Sum_probs=200.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCC----cccCCCC-CCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYP-WPERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|...+..+... -.+..+. ++... ..+++
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 121 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMT-EKVVG 121 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCT-TCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHH-hhhhh
Confidence 57999999999999999999 899999999998899998642 2222211100000 0011111 22211 23445
Q ss_pred hHHHHHHHHH-------HH-----HhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCee
Q 041145 83 HVELLDYLHG-------YA-----VHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAI 150 (522)
Q Consensus 83 ~~~~~~yl~~-------~~-----~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 150 (522)
..++..++.. +. ++.++ .+.++.++..++. +.|.+. +
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~-------------------------~~v~~~-g--- 170 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN-------------------------HTVEAA-G--- 170 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET-------------------------TEEEET-T---
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC-------------------------CEEEEC-C---
Confidence 7777777653 33 55555 4554667666542 135553 3
Q ss_pred EEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccC-CCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHh
Q 041145 151 QWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYS-KLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEA 229 (522)
Q Consensus 151 ~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~-~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~ 229 (522)
.++.||+||+|||. .|..|++| |.+. ..++++.++. .+ ....+|+|+|||+|.+|+|+|..+++.
T Consensus 171 ~~~~~d~lViATGs---~p~~p~i~---G~~~--~~v~~~~~~~~~l------~~~~g~~vvViGgG~~g~E~A~~l~~~ 236 (523)
T 1mo9_A 171 KVFKAKNLILAVGA---GPGTLDVP---GVNA--KGVFDHATLVEEL------DYEPGSTVVVVGGSKTAVEYGCFFNAT 236 (523)
T ss_dssp EEEEBSCEEECCCE---ECCCCCST---TTTS--BTEEEHHHHHHHC------CSCCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred EEEEeCEEEECCCC---CCCCCCCC---Cccc--CcEeeHHHHHHHH------HhcCCCeEEEECCCHHHHHHHHHHHHc
Confidence 36899999999994 58888898 8764 1256665544 32 123459999999999999999999998
Q ss_pred cCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCc
Q 041145 230 NQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPL 309 (522)
Q Consensus 230 ~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (522)
+. +||++.|.+.. +|..+ ..
T Consensus 237 G~-----~Vtlv~~~~~~-l~~~~---------------------------------------~~--------------- 256 (523)
T 1mo9_A 237 GR-----RTVMLVRTEPL-KLIKD---------------------------------------NE--------------- 256 (523)
T ss_dssp TC-----EEEEECSSCTT-TTCCS---------------------------------------HH---------------
T ss_pred CC-----eEEEEEecCcc-ccccc---------------------------------------HH---------------
Confidence 65 59999988752 22111 00
Q ss_pred ccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec--Cc------EEecCCc-eeeccEEEEeccC
Q 041145 310 VKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--GG------IEFEDKS-KLEADVVLLATGY 379 (522)
Q Consensus 310 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~------v~~~dG~-~~~~D~VI~ATG~ 379 (522)
+...+.+.+++.+|+++.+. +.+++. ++ |+++||+ ++++|.||+|||+
T Consensus 257 ----------------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 257 ----------------------TRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp ----------------------HHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred ----------------------HHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 01112233456678888776 777764 33 6677887 7999999999999
Q ss_pred CCCcc-ccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcCCC
Q 041145 380 DGKKK-LQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 380 ~~~~~-l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+++.. +..- .++..++++.+.+..++. ++.||||++|++.+. ...+.|..||+.+|..+.|..
T Consensus 315 ~p~~~~~l~~-----~gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 379 (523)
T 1mo9_A 315 QPRSAELAKI-----LGLDLGPKGEVLVNEYLQ-TSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK 379 (523)
T ss_dssp EECCHHHHHH-----HTCCBCTTSCBCCCTTSB-CSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccCHHH-----cCCccCCCCCEEECCCCc-cCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 99953 1110 112223345566665543 689999999988764 346789999999999998853
No 41
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.6e-27 Score=248.61 Aligned_cols=314 Identities=12% Similarity=0.060 Sum_probs=195.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--C---CCCcEEEccCCCCCcccCCC-ccCcccccCCCC----CcccCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R---HYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRC----DFEFSDYPWPERDDASF 80 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~---g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 80 (522)
.+||+|||||++|+++|..| . |++|+|||+++ +||+|.+. +.|+..+..... ...+..+.++.......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 35999999999999999999 5 99999999988 99998642 233221111000 00111122210000111
Q ss_pred CChHHHH-----------HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe
Q 041145 81 PSHVELL-----------DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA 149 (522)
Q Consensus 81 ~~~~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 149 (522)
.+...+. .++..+.+++++ .+..++ ++.++...+.. .+.+.|...+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~~~~-----------------~~~~~V~~~~g~- 139 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTPGLA-----------------RHRIKATAADGS- 139 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSSCCS-----------------SEEEEEECTTSC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcccCC-----------------CCEEEEEeCCCc-
Confidence 2333333 334555666666 455554 44432200000 123334332221
Q ss_pred eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHh
Q 041145 150 IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEA 229 (522)
Q Consensus 150 ~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~ 229 (522)
...+.||+||+|||. .|..|++| |.+.. .++++.++... ...+++|+|||+|.+|+|+|..+++.
T Consensus 140 ~~~~~~d~lviATGs---~p~~p~i~---g~~~~--~v~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A~~l~~~ 204 (499)
T 1xdi_A 140 TSEHEADVVLVATGA---SPRILPSA---QPDGE--RILTWRQLYDL-------DALPDHLIVVGSGVTGAEFVDAYTEL 204 (499)
T ss_dssp EEEEEESEEEECCCE---EECCCGGG---CCCSS--SEEEGGGGGGC-------SSCCSSEEEESCSHHHHHHHHHHHHT
T ss_pred EEEEEeCEEEEcCCC---CCCCCCCC---CCCcC--cEEehhHhhhh-------hccCCeEEEECCCHHHHHHHHHHHHc
Confidence 136899999999994 58888888 87542 25666655442 13569999999999999999999998
Q ss_pred cCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCc
Q 041145 230 NQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPL 309 (522)
Q Consensus 230 ~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (522)
+. +||++.|.+.. +|..+ ..
T Consensus 205 g~-----~Vtlv~~~~~~-l~~~d---------------------------------------~~--------------- 224 (499)
T 1xdi_A 205 GV-----PVTVVASQDHV-LPYED---------------------------------------AD--------------- 224 (499)
T ss_dssp TC-----CEEEECSSSSS-SCCSS---------------------------------------HH---------------
T ss_pred CC-----eEEEEEcCCcc-ccccC---------------------------------------HH---------------
Confidence 65 49999998752 22211 00
Q ss_pred ccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecCCceeeccEEEEeccCCCCcc
Q 041145 310 VKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFEDKSKLEADVVLLATGYDGKKK 384 (522)
Q Consensus 310 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~ATG~~~~~~ 384 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ |.+.||+++++|.||+|+|++++..
T Consensus 225 ----------------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 225 ----------------------AALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp ----------------------HHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCS
T ss_pred ----------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 01112233456678888875 77776543 4567888899999999999999853
Q ss_pred ccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 385 LQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 385 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
+. ...-.++..++.+.+.+...+ .++.||||++|++.+.. ..+.|..||+.+|..+.|.
T Consensus 283 ~l---~l~~~gl~~~~~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 283 GL---GLERVGIQLGRGNYLTVDRVS-RTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SS---CTTTTTCCCBTTTBCCCCSSS-BCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred cC---CchhcCceECCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 31 111112222334556666654 46899999999887643 3578999999999999986
No 42
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.95 E-value=4.5e-27 Score=243.69 Aligned_cols=292 Identities=19% Similarity=0.205 Sum_probs=184.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| . +.+|+|||+++.+++... ..|.. . .......++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--~~p~~-------------------~-~~~~~~~~~ 60 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--GIPYV-------------------V-EGLSTPDKL 60 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--CCccc-------------------c-CCCCCHHHh
Confidence 46999999999999999999 3 889999999876542211 01100 0 111122222
Q ss_pred HHH-HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 87 LDY-LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 87 ~~y-l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
..+ .+.+++++++ .+.++++|+.++. ..+.|.+.++ ..++.||+||+|||.
T Consensus 61 ~~~~~~~~~~~~gi--~v~~~~~v~~i~~-----------------------~~~~v~~~~g--~~~~~~d~lviAtG~- 112 (449)
T 3kd9_A 61 MYYPPEVFIKKRGI--DLHLNAEVIEVDT-----------------------GYVRVRENGG--EKSYEWDYLVFANGA- 112 (449)
T ss_dssp -----CTHHHHTTC--EEETTCEEEEECS-----------------------SEEEEECSSS--EEEEECSEEEECCCE-
T ss_pred hhcCHHHHHHhcCc--EEEecCEEEEEec-----------------------CCCEEEECCc--eEEEEcCEEEECCCC-
Confidence 232 2345567777 7888999998854 2345654332 347899999999994
Q ss_pred CCCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 166 GDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 166 s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
.|+.|++| |.+. . .++......+..... ....+.+|+|+|||+|.+|+|+|..+++.+. +||++.|.
T Consensus 113 --~p~~p~i~---G~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtlv~~~ 180 (449)
T 3kd9_A 113 --SPQVPAIE---GVNL-K-GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGK-----NVTMIVRG 180 (449)
T ss_dssp --EECCCSCB---TTTS-T-TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESS
T ss_pred --CCCCCCCC---CCCC-C-CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCC-----eEEEEEcC
Confidence 58888898 8753 1 133322222110000 0112378999999999999999999999865 59999998
Q ss_pred CceeecC-CCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccc
Q 041145 245 LHWTLPS-YRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEED 323 (522)
Q Consensus 245 ~~~~~p~-~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 323 (522)
+.++ +. .+ ..+
T Consensus 181 ~~~l-~~~~~---------------------------------------~~~---------------------------- 192 (449)
T 3kd9_A 181 ERVL-RRSFD---------------------------------------KEV---------------------------- 192 (449)
T ss_dssp SSTT-TTTSC---------------------------------------HHH----------------------------
T ss_pred Cccc-hhhcC---------------------------------------HHH----------------------------
Confidence 8632 11 11 001
Q ss_pred cccccccccCcchhhhcccCcEEEEeCc-eeEEecCc---EEecCCceeeccEEEEeccCCCCccccccCCCcccccccC
Q 041145 324 YASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG---IEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLAD 399 (522)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~---v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~ 399 (522)
.+.+.+.+++. |+++.+. +.+++.++ ..+.||+++++|.||+|||++++..+..-+ ++..+
T Consensus 193 ---------~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~-----gl~~~ 257 (449)
T 3kd9_A 193 ---------TDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQL-----GVRIG 257 (449)
T ss_dssp ---------HHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHT-----TCCBC
T ss_pred ---------HHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhC-----CccCC
Confidence 11112334455 7777776 77776543 356788889999999999999985432111 12223
Q ss_pred cccccccccccccCCCCceeEeecccc-----------cchhhHHHHHHHHHHHHhcCCC
Q 041145 400 SSGIMPLYRGTIHPLIPNMAFVGYIET-----------VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 400 ~~~~~~l~~~~~~~~~pni~~vG~~~~-----------~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+.+.+.+...+ .++.||||++|++.. ....+.|..||+.+|+.+.|..
T Consensus 258 ~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 258 ETGAIWTNEKM-QTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp TTSSBCCCTTC-BCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEECCCC-ccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 44556665544 468999999997752 1235789999999999998864
No 43
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.95 E-value=6.7e-28 Score=250.56 Aligned_cols=299 Identities=16% Similarity=0.129 Sum_probs=188.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCC----cccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+...... .....+.+... ......
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 80 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS--GGTLDW 80 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC-----CCH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC--CCCcCH
Confidence 46999999999999999999 89999999997 789998642 2332211000000 01111111111 112334
Q ss_pred HHHHHHHHHHH-----------HhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEE
Q 041145 84 VELLDYLHGYA-----------VHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQW 152 (522)
Q Consensus 84 ~~~~~yl~~~~-----------~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 152 (522)
.++..+.+.++ ++.++ .+..+ +++.++. +.|++ ++ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~~-------------------------~~v~~-~g---~~ 128 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVDA-------------------------HTIEV-EG---QR 128 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET-------------------------TEEEE-TT---EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEccC-------------------------CEEEE-CC---EE
Confidence 44444433332 33343 23333 2333321 24665 33 36
Q ss_pred EEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCC
Q 041145 153 YGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQG 232 (522)
Q Consensus 153 ~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~ 232 (522)
+.||+||+|||. .|..|++| |.+. ++++.++... ...+|+|+|||+|.+|+|+|..|++.+.
T Consensus 129 ~~~d~lviAtGs---~p~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~vvVvGgG~~g~e~A~~l~~~G~- 190 (463)
T 2r9z_A 129 LSADHIVIATGG---RPIVPRLP---GAEL----GITSDGFFAL-------QQQPKRVAIIGAGYIGIELAGLLRSFGS- 190 (463)
T ss_dssp EEEEEEEECCCE---EECCCSCT---TGGG----SBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC-
T ss_pred EEcCEEEECCCC---CCCCCCCC---Cccc----eecHHHHhhh-------hccCCEEEEECCCHHHHHHHHHHHhcCC-
Confidence 899999999994 48888888 8742 3455444321 1246899999999999999999999865
Q ss_pred CCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccC
Q 041145 233 PNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKF 312 (522)
Q Consensus 233 ~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
+||++.|.+..+ +..+ ..+
T Consensus 191 ----~Vtlv~~~~~~l-~~~~---------------------------------------~~~----------------- 209 (463)
T 2r9z_A 191 ----EVTVVALEDRLL-FQFD---------------------------------------PLL----------------- 209 (463)
T ss_dssp ----EEEEECSSSSSS-TTSC---------------------------------------HHH-----------------
T ss_pred ----EEEEEEcCCccc-cccC---------------------------------------HHH-----------------
Confidence 599999887521 2111 000
Q ss_pred CCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCc-eeeccEEEEeccCCCCcccc
Q 041145 313 GLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKS-KLEADVVLLATGYDGKKKLQ 386 (522)
Q Consensus 313 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~-~~~~D~VI~ATG~~~~~~l~ 386 (522)
.+.+.+.+++.+|+++.+. +.+++.+ .|+++||+ ++++|.||+|||++++...
T Consensus 210 --------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~- 268 (463)
T 2r9z_A 210 --------------------SATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRD- 268 (463)
T ss_dssp --------------------HHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTT-
T ss_pred --------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCC-
Confidence 0111233446678888876 7777642 47788999 8999999999999998521
Q ss_pred ccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcCC
Q 041145 387 SILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g~ 447 (522)
+.....++..++++.+.+...+ .++.||||++|++.+. ...+.|..||+.+|..+.|.
T Consensus 269 --l~~~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 269 --LGLEAAGIEVQSNGMVPTDAYQ-NTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp --SCHHHHTCCCCTTSCCCCCTTS-BCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred --CCchhcCCccCCCCCEeECCCC-ccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 1001011222345556666554 4789999999988653 34678999999999999875
No 44
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.95 E-value=4.4e-28 Score=252.38 Aligned_cols=303 Identities=14% Similarity=0.066 Sum_probs=190.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc-----ccCCCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF-----EFSDYPWPERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+......+ .+..+.++ . .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~--~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G--EVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E--CCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C--CCccC
Confidence 45999999999999999999 89999999998 789988641 22322110000000 01111111 0 00111
Q ss_pred hH-----------HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeE
Q 041145 83 HV-----------ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQ 151 (522)
Q Consensus 83 ~~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (522)
.. .+..++...+++.++ .+..++.+. . + ...+.|.+.+++ .+
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~---i--d-------------------~~~v~V~~~~G~-~~ 131 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF---A--D-------------------ANTLLVDLNDGG-TE 131 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE---S--S-------------------SSEEEEEETTSC-CE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE---e--c-------------------CCeEEEEeCCCc-eE
Confidence 11 223334555566665 455555432 1 2 234555543331 24
Q ss_pred EEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcC
Q 041145 152 WYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQ 231 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~ 231 (522)
++.||+||+|||.. |..|+++ |.+. .++++.+.... ...+|+|+|||+|.+|+|+|..+++.+.
T Consensus 132 ~~~~d~lViAtG~~---~~~~~~~---g~~~---~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~~g~ 195 (464)
T 2a8x_A 132 SVTFDNAIIATGSS---TRLVPGT---SLSA---NVVTYEEQILS-------RELPKSIIIAGAGAIGMEFGYVLKNYGV 195 (464)
T ss_dssp EEEEEEEEECCCEE---ECCCTTC---CCBT---TEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEcCEEEECCCCC---CCCCCCC---CCCc---eEEecHHHhhc-------cccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence 79999999999954 6778788 7653 25565554332 1247999999999999999999999865
Q ss_pred CCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCccc
Q 041145 232 GPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVK 311 (522)
Q Consensus 232 ~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+||++.|.+. ++|..+ ..+.
T Consensus 196 -----~Vtlv~~~~~-~l~~~~---------------------------------------~~~~--------------- 215 (464)
T 2a8x_A 196 -----DVTIVEFLPR-ALPNED---------------------------------------ADVS--------------- 215 (464)
T ss_dssp -----EEEEECSSSS-SSTTSC---------------------------------------HHHH---------------
T ss_pred -----eEEEEEcCCc-cccccC---------------------------------------HHHH---------------
Confidence 5999999875 223211 0000
Q ss_pred CCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEec-CC--ceeeccEEEEeccCCCCc
Q 041145 312 FGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFE-DK--SKLEADVVLLATGYDGKK 383 (522)
Q Consensus 312 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~-dG--~~~~~D~VI~ATG~~~~~ 383 (522)
+.+.+.+++.+|+++.+. +.+++.++ +.++ || +++++|.||+|||++|+.
T Consensus 216 ----------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 216 ----------------------KEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ----------------------HHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred ----------------------HHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 111133445578888876 77776532 4454 67 569999999999999985
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcC
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g 446 (522)
.+. ...-.++..++.+.+.+..++. ++.||||++|++.+.. ..+.|..||+.+|..+.|
T Consensus 274 ~~l---~~~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 274 EGY---GLDKAGVALTDRKAIGVDDYMR-TNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SSS---CHHHHTCCBCTTSSBCCCTTSB-CSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CCC---CchhcCCccCCCCCEeECcCCc-cCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 321 1011112223345566666644 7899999999887643 357899999999999988
No 45
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.1e-27 Score=249.19 Aligned_cols=300 Identities=14% Similarity=0.114 Sum_probs=182.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCC----CCcccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPR----CDFEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+.... .......+.+... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~---~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK---FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC---CccCH
Confidence 46999999999999999999 89999999998 589998642 22321110000 0000111111110 01122
Q ss_pred HHHH-----------HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe------
Q 041145 84 VELL-----------DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET------ 146 (522)
Q Consensus 84 ~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------ 146 (522)
.++. .++....++.++ .+..++ ++.++ . +.|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~id-----------------------~--~~v~v~~~~~~~~ 129 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGT-ASFLS-----------------------E--NRILIKGTKDNNN 129 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CCCC----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEee-----------------------C--CEEEEEecccccc
Confidence 2222 223333344444 333332 11111 1 1233322
Q ss_pred ----CCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHH
Q 041145 147 ----NQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDL 222 (522)
Q Consensus 147 ----~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~di 222 (522)
.++..++.||+||+||| +.|..|++| |.+ .++|+.++..+ . . +|+|+|||+|.+|+|+
T Consensus 130 ~~~~~~~~~~~~~d~lViAtG---s~p~~p~i~---G~~----~~~~~~~~~~~------~-~-~~~vvViGgG~ig~E~ 191 (500)
T 1onf_A 130 KDNGPLNEEILEGRNILIAVG---NKPVFPPVK---GIE----NTISSDEFFNI------K-E-SKKIGIVGSGYIAVEL 191 (500)
T ss_dssp -----------CBSSEEECCC---CCBCCCSCT---TGG----GCEEHHHHTTC------C-C-CSEEEEECCSHHHHHH
T ss_pred ccccCCCceEEEeCEEEECCC---CCCCCCCCC---CCC----cccCHHHHhcc------C-C-CCeEEEECChHHHHHH
Confidence 00013689999999999 568889899 874 25677666542 1 1 7999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHH
Q 041145 223 AVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESY 302 (522)
Q Consensus 223 a~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
|..|++.+. +||++.|.+..+ |..+ ..
T Consensus 192 A~~l~~~g~-----~Vtlv~~~~~~l-~~~d---------------------------------------~~-------- 218 (500)
T 1onf_A 192 INVIKRLGI-----DSYIFARGNRIL-RKFD---------------------------------------ES-------- 218 (500)
T ss_dssp HHHHHTTTC-----EEEEECSSSSSC-TTSC---------------------------------------HH--------
T ss_pred HHHHHHcCC-----eEEEEecCCccC-cccc---------------------------------------hh--------
Confidence 999998864 599999987632 3221 00
Q ss_pred HhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCce-eeccEEEE
Q 041145 303 LVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSK-LEADVVLL 375 (522)
Q Consensus 303 ~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~-~~~D~VI~ 375 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ .|.++||++ +++|.||+
T Consensus 219 -----------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~ 269 (500)
T 1onf_A 219 -----------------------------VINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIY 269 (500)
T ss_dssp -----------------------------HHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEE
T ss_pred -----------------------------hHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEE
Confidence 01112234556778888876 7777642 377889988 99999999
Q ss_pred eccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccc------------------------------
Q 041145 376 ATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIE------------------------------ 425 (522)
Q Consensus 376 ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~------------------------------ 425 (522)
|||++++... +.....++.. +.+.+.+...+ .++.||||++|++.
T Consensus 270 a~G~~p~~~~---l~~~~~g~~~-~~G~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (500)
T 1onf_A 270 CVGRSPDTEN---LKLEKLNVET-NNNYIVVDENQ-RTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVT 344 (500)
T ss_dssp CCCBCCTTTT---SSCTTTTCCB-SSSCEEECTTC-BCSSSSEEECSTTEEEC---------------------------
T ss_pred CCCCCcCCCC---CCchhcCccc-cCCEEEECCCc-ccCCCCEEEEeccccccccccccccccccccccccccccccccc
Confidence 9999998521 1011112222 34555666554 47899999999765
Q ss_pred ----c-cchhhHHHHHHHHHHHHhcCC
Q 041145 426 ----T-VSNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 426 ----~-~~~~~~ae~qa~~~a~~l~g~ 447 (522)
+ ....+.|..||+.+|+.+.|.
T Consensus 345 ~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 345 EDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp ---CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCcccchhHHHHHHHHHHHHHhCC
Confidence 2 223578999999999999874
No 46
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.95 E-value=1.1e-27 Score=255.69 Aligned_cols=295 Identities=14% Similarity=0.153 Sum_probs=192.8
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
+|+|||||++|+++|..| . +++|+|||+++.++ +..+..|.. ..+ ........+..
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~--~~~~~l~~~----------~~~--------~~~~~~~~~~~ 62 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS--FANCGLPYH----------ISG--------EIAQRSALVLQ 62 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGGGHHHH----------HTS--------SSCCGGGGBCC
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccccCchHH----------hcC--------CcCChHHhhcc
Confidence 899999999999999999 3 88999999998764 111011100 000 11122333455
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC--CeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN--QAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~d~vViAtG~~s 166 (522)
++..+++++++ .++++++|++++. + .. .+++.+. +...++.||+||+|||.
T Consensus 63 ~~~~~~~~~~i--~~~~~~~V~~id~--~-------------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~-- 115 (565)
T 3ntd_A 63 TPESFKARFNV--EVRVKHEVVAIDR--A-------------------AK--LVTVRRLLDGSEYQESYDTLLLSPGA-- 115 (565)
T ss_dssp CHHHHHHHHCC--EEETTEEEEEEET--T-------------------TT--EEEEEETTTCCEEEEECSEEEECCCE--
T ss_pred CHHHHHHhcCc--EEEECCEEEEEEC--C-------------------CC--EEEEEecCCCCeEEEECCEEEECCCC--
Confidence 66777777888 6888999999986 3 22 3444441 22347899999999995
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+.|++| |.+.. .++++..+.+..... ......+|+|+|||+|.+|+|+|..+++.+. +||++.|.+
T Consensus 116 -~p~~p~ip---G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~-----~Vtlv~~~~ 184 (565)
T 3ntd_A 116 -APIVPPIP---GVDNP--LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGI-----KTTLLELAD 184 (565)
T ss_dssp -EECCCCCT---TCCST--TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSS
T ss_pred -CCCCCCCC---CCCCC--CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCC-----cEEEEEcCC
Confidence 58888899 87642 233333332211000 0122467899999999999999999999865 599999988
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.. +|..+ ..+..
T Consensus 185 ~~-l~~~~---------------------------------------~~~~~---------------------------- 196 (565)
T 3ntd_A 185 QV-MTPVD---------------------------------------REMAG---------------------------- 196 (565)
T ss_dssp SS-CTTSC---------------------------------------HHHHH----------------------------
T ss_pred cc-chhcC---------------------------------------HHHHH----------------------------
Confidence 52 22211 00011
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEec--------------------C---cEEecCCceeeccEEEEeccCCC
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--------------------G---GIEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--------------------~---~v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
.+.+.+++.+|+++.+. +.+++. + .++++||+++++|.||+|||+++
T Consensus 197 ---------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 197 ---------FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp ---------HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEE
T ss_pred ---------HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCcc
Confidence 11123445567777665 666654 2 26778999999999999999999
Q ss_pred CccccccCCCcccccccCcccccccccccccCCCCceeEeecccc-------c----chhhHHHHHHHHHHHHhcCCC
Q 041145 382 KKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-------V----SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 382 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-------~----~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+..+..- .++..++++.+.+...+ .++.||||++|++.. . ..++.|..||+.+|+.+.|+.
T Consensus 268 ~~~l~~~-----~g~~~~~~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 268 ETQLARD-----AGLAIGELGGIKVNAMM-QTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CCHHHHH-----HTCCBCTTSSBCCCTTC-BCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred chHHHHh-----CCcccCCCCCEEECCCc-ccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 8533210 11222345556666544 468999999997652 1 135789999999999998864
No 47
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.95 E-value=5.8e-27 Score=231.14 Aligned_cols=181 Identities=14% Similarity=0.199 Sum_probs=126.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+||||||||++||..| .|++|+|||+.. .||.+...+.+.. .....++.+ +......++..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~G~~~~~-----~~i~~~~g~-------~~~i~~~~l~~ 70 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAGGQLTTT-----TIIENFPGF-------PNGIDGNELMM 70 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTTCGGGGS-----SEECCSTTC-------TTCEEHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccCCCcCCh-----HHhhhccCC-------cccCCHHHHHH
Confidence 36999999999999999999 899999999964 5665543222211 111112211 23346778888
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++...+++++. .+. ...|..... + .....+.+.++. ++.||+||+|||. .
T Consensus 71 ~~~~~~~~~~~--~~~-~~~v~~~~~--~-------------------~~~~~~~~~~~~---~~~~~~liiATG~---~ 120 (314)
T 4a5l_A 71 NMRTQSEKYGT--TII-TETIDHVDF--S-------------------TQPFKLFTEEGK---EVLTKSVIIATGA---T 120 (314)
T ss_dssp HHHHHHHHTTC--EEE-CCCEEEEEC--S-------------------SSSEEEEETTCC---EEEEEEEEECCCE---E
T ss_pred HHHHHHhhcCc--EEE-EeEEEEeec--C-------------------CCceEEEECCCe---EEEEeEEEEcccc---c
Confidence 88888888775 333 344555544 2 223444444443 7999999999994 4
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
|+.|++| |.+.+.+..++...+.... ...+++|+|+|||+|.+|+|+|..+++.+. +||++.|.+.
T Consensus 121 ~~~~~ip---G~~~~~~~~~~~~~~~~~~----~~~~~~~~vvViGgG~ig~e~A~~l~~~G~-----~Vt~v~~~~~ 186 (314)
T 4a5l_A 121 AKRMHVP---GEDKYWQNGVSACAICDGA----VPIFRNKVLMVVGGGDAAMEEALHLTKYGS-----KVIILHRRDA 186 (314)
T ss_dssp ECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSS-----EEEEECSSSS
T ss_pred ccccCCC---ccccccccceeeehhhhhh----hhhcCCCeEEEECCChHHHHHHHHHHHhCC-----eeeeeccccc
Confidence 8889999 9887666656655443311 234678999999999999999999999865 5999998765
No 48
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.95 E-value=1.6e-27 Score=243.65 Aligned_cols=289 Identities=14% Similarity=0.166 Sum_probs=185.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC--CcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY--DPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
++|+|||||++|+++|..| .|+ +|+|||+++..+ |....+ ++..+... .... ....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~l~~~---~~~~--~~~~------ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPPL--SKAYLKSG---GDPN--SLMF------ 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGGG--GTGGGGSC---CCTT--SSBS------
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCccC--CHHHHCCC---CCHH--HccC------
Confidence 4899999999999999999 677 899999987542 211110 00000000 0000 1111
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
+...+..+.++ .+.. ++|+.++. + ...|++.++. ++.||+||+|||.
T Consensus 62 -~~~~~~~~~~i--~~~~-~~v~~id~--~---------------------~~~v~~~~g~---~~~~d~lvlAtG~--- 108 (404)
T 3fg2_P 62 -RPEKFFQDQAI--ELIS-DRMVSIDR--E---------------------GRKLLLASGT---AIEYGHLVLATGA--- 108 (404)
T ss_dssp -SCHHHHHHTTE--EEEC-CCEEEEET--T---------------------TTEEEESSSC---EEECSEEEECCCE---
T ss_pred -CCHHHHHhCCC--EEEE-EEEEEEEC--C---------------------CCEEEECCCC---EEECCEEEEeeCC---
Confidence 11223344555 4555 88888875 2 1257776664 7899999999994
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCce
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~ 247 (522)
.|+.|++| |.+. ..+++.....+... .......+|+|+|||+|.+|+|+|..+++.+. +||++.|.+.+
T Consensus 109 ~p~~~~i~---g~~~--~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~-----~Vtvv~~~~~~ 177 (404)
T 3fg2_P 109 RNRMLDVP---NASL--PDVLYLRTLDESEV-LRQRMPDKKHVVVIGAGFIGLEFAATARAKGL-----EVDVVELAPRV 177 (404)
T ss_dssp EECCCCST---TTTS--TTEECCSSHHHHHH-HHHHGGGCSEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSSSST
T ss_pred CccCCCCC---CCCC--CcEEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC-----EEEEEeCCCcc
Confidence 48888888 7652 12333222221100 00223468999999999999999999998864 59999988763
Q ss_pred eecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccc
Q 041145 248 TLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASC 327 (522)
Q Consensus 248 ~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 327 (522)
......
T Consensus 178 ~~~~~~-------------------------------------------------------------------------- 183 (404)
T 3fg2_P 178 MARVVT-------------------------------------------------------------------------- 183 (404)
T ss_dssp TTTTSC--------------------------------------------------------------------------
T ss_pred hhhccC--------------------------------------------------------------------------
Confidence 211000
Q ss_pred cccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCcc
Q 041145 328 QMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSS 401 (522)
Q Consensus 328 ~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~ 401 (522)
+.+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||+++++|.||+|||++++..+..-. ++.. .+
T Consensus 184 --~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~-~~ 255 (404)
T 3fg2_P 184 --PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAA-----GLPT-AA 255 (404)
T ss_dssp --HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-----TCCB-SS
T ss_pred --HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhC-----CCCC-CC
Confidence 0011122234556788888875 7777653 4889999999999999999999985432111 1111 22
Q ss_pred cccccccccccCCCCceeEeecccccc-----------hhhHHHHHHHHHHHHhcCCC
Q 041145 402 GIMPLYRGTIHPLIPNMAFVGYIETVS-----------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 402 ~~~~l~~~~~~~~~pni~~vG~~~~~~-----------~~~~ae~qa~~~a~~l~g~~ 448 (522)
+ +.+...+ .++.||||++|.+.... .++.|..||+.+|+.|.|+.
T Consensus 256 G-i~vd~~~-~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 256 G-IIVDQQL-LTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp S-EEECTTS-BCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred C-EEECCCc-ccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 3 5555544 36899999999765432 25789999999999999874
No 49
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.95 E-value=8.4e-28 Score=250.94 Aligned_cols=308 Identities=15% Similarity=0.076 Sum_probs=193.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc------ccCCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF------EFSDYPWPERDDASFP 81 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 81 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|...+......+ .+..+.++.. ....
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~--~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS--EVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES--CEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC--CCcc
Confidence 46999999999999999999 899999999998999998642 22322111000000 1111111100 0111
Q ss_pred ChHHHHHH-----------HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCee
Q 041145 82 SHVELLDY-----------LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAI 150 (522)
Q Consensus 82 ~~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 150 (522)
+..++..+ +..+.++.++ .+..++. +.++ .+.+.|++.++ +.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~~-----------------------~~~~~v~~~~g-g~ 136 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGYG-KITG-----------------------KNQVTATKADG-GT 136 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEE-EEEE-----------------------TTEEEEECTTS-CE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEec-----------------------CCEEEEEecCC-Cc
Confidence 22333222 2444555565 4555543 2232 23455544331 12
Q ss_pred EEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhc
Q 041145 151 QWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEAN 230 (522)
Q Consensus 151 ~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~ 230 (522)
+++.||+||+|||. .|..|++| |.+.. .++|+.++..+. ..+|+|+|||+|.+|+|+|..+++.+
T Consensus 137 ~~~~~d~lViAtGs---~p~~p~i~---g~~~~--~v~t~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g 201 (474)
T 1zmd_A 137 QVIDTKNILIATGS---EVTPFPGI---TIDED--TIVSSTGALSLK-------KVPEKMVVIGAGVIGVELGSVWQRLG 201 (474)
T ss_dssp EEEEEEEEEECCCE---EECCCTTC---CCCSS--SEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEeCEEEECCCC---CCCCCCCC---CCCcC--cEEcHHHHhhcc-------ccCceEEEECCCHHHHHHHHHHHHcC
Confidence 47999999999995 47888888 76531 367776655431 24699999999999999999999986
Q ss_pred CCCCCCcEEEEeecCceeec-CCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCc
Q 041145 231 QGPNGQPCTMVIRTLHWTLP-SYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPL 309 (522)
Q Consensus 231 ~~~~~~~Vt~v~R~~~~~~p-~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (522)
. +||++.|.+.. +| ..+ ..+
T Consensus 202 ~-----~Vtlv~~~~~~-l~~~~~---------------------------------------~~~-------------- 222 (474)
T 1zmd_A 202 A-----DVTAVEFLGHV-GGVGID---------------------------------------MEI-------------- 222 (474)
T ss_dssp C-----EEEEECSSSSS-SCSSCC---------------------------------------HHH--------------
T ss_pred C-----EEEEEeccCcc-CCcccC---------------------------------------HHH--------------
Confidence 5 59999998752 23 111 000
Q ss_pred ccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--c-EEe-------cCCceeeccEEEEecc
Q 041145 310 VKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--G-IEF-------EDKSKLEADVVLLATG 378 (522)
Q Consensus 310 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~-v~~-------~dG~~~~~D~VI~ATG 378 (522)
.+.+.+.+++.+|+++.+. +.+++.+ + +.+ .+|+++++|.||+|||
T Consensus 223 -----------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 223 -----------------------SKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp -----------------------HHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred -----------------------HHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcC
Confidence 0111233446678888775 7777643 2 443 3567799999999999
Q ss_pred CCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCCC
Q 041145 379 YDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 379 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~~ 448 (522)
++++..+. .....++..++++.+.+...+ .++.||||++|++.... ..+.|..||+.+|..+.|..
T Consensus 280 ~~p~~~~l---~l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 280 RRPFTKNL---GLEELGIELDPRGRIPVNTRF-QTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp EEECCTTS---SHHHHTCCCCTTSCCCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCCcC---CchhcCCccCCCCCEEECcCC-ccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCC
Confidence 99985321 101011222334556666654 47899999999887643 35789999999999998863
No 50
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.95 E-value=2.2e-27 Score=249.93 Aligned_cols=310 Identities=18% Similarity=0.222 Sum_probs=189.5
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC--------CCCcccCCC-ccCcccccCCCCC----cccCCCCCCC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN--------SIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPE 74 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~--------~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 74 (522)
..+||+|||||++|+++|..| .|++|+|||+.+ .+||+|.+. +.|...+..+... ..+..+.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 357999999999999999999 899999999964 789998752 3343322111110 1111222222
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCC------c-CceE-eceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe
Q 041145 75 RDDASFPSHVELLDYLHGYAVHFDV------L-KYIK-FNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET 146 (522)
Q Consensus 75 ~~~~~~~~~~~~~~yl~~~~~~~~l------~-~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 146 (522)
.. ........+..+.+.+.+++.. . ..+. +..++..++. . .+.+.+
T Consensus 111 ~~-~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~-----------------------~--~v~v~~ 164 (519)
T 3qfa_A 111 EE-TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGP-----------------------H--RIKATN 164 (519)
T ss_dssp CS-SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET-----------------------T--EEEEEC
T ss_pred CC-cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC-----------------------C--EEEEEc
Confidence 11 2345566666666655443210 0 0111 1223333321 2 244433
Q ss_pred CCe-eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHH
Q 041145 147 NQA-IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVE 225 (522)
Q Consensus 147 ~~~-~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~ 225 (522)
.++ .+++.||+||||||. .|+.|++| |.+.+ ++++.++..+ ...+++|+|||+|.+|+|+|..
T Consensus 165 ~~g~~~~i~~d~lViATGs---~p~~p~i~---G~~~~---~~t~~~~~~l-------~~~~~~vvVIGgG~ig~E~A~~ 228 (519)
T 3qfa_A 165 NKGKEKIYSAERFLIATGE---RPRYLGIP---GDKEY---CISSDDLFSL-------PYCPGKTLVVGASYVALECAGF 228 (519)
T ss_dssp TTCCCCEEEEEEEEECCCE---EECCCCCT---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHHHHHHH
T ss_pred CCCCEEEEECCEEEEECCC---CcCCCCCC---CccCc---eEcHHHHhhh-------hhcCCeEEEECCcHHHHHHHHH
Confidence 222 347999999999994 58889999 86543 3455554432 2346789999999999999999
Q ss_pred HHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhh
Q 041145 226 CAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVW 305 (522)
Q Consensus 226 l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
+++.+. +||++.|.. ++|..+ ..+
T Consensus 229 l~~~G~-----~Vtlv~~~~--~l~~~d---------------------------------------~~~---------- 252 (519)
T 3qfa_A 229 LAGIGL-----DVTVMVRSI--LLRGFD---------------------------------------QDM---------- 252 (519)
T ss_dssp HHHTTC-----CEEEEESSC--SSTTSC---------------------------------------HHH----------
T ss_pred HHHcCC-----eEEEEeccc--ccccCC---------------------------------------HHH----------
Confidence 999865 499998852 333221 001
Q ss_pred cCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEE---ec---CcEE----ecCCc---eeecc
Q 041145 306 KLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWF---WS---GGIE----FEDKS---KLEAD 371 (522)
Q Consensus 306 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~---~~---~~v~----~~dG~---~~~~D 371 (522)
.+.+.+.+++.+|+++.+. +.++ .+ +.+. ..+|. ++++|
T Consensus 253 ---------------------------~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D 305 (519)
T 3qfa_A 253 ---------------------------ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYN 305 (519)
T ss_dssp ---------------------------HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEES
T ss_pred ---------------------------HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECC
Confidence 1111233446677777764 3333 32 2222 24563 46899
Q ss_pred EEEEeccCCCCccccccCCCcccccccC-cccccccccccccCCCCceeEeeccc-c-cchhhHHHHHHHHHHHHhcCCC
Q 041145 372 VVLLATGYDGKKKLQSILPKPFSSLLAD-SSGIMPLYRGTIHPLIPNMAFVGYIE-T-VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 372 ~VI~ATG~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~pni~~vG~~~-~-~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
.||+|||++|+..+. .....++..+ ..+.+.+...+. ++.||||++|++. + +...+.|..|++.+|+.+.|..
T Consensus 306 ~vi~a~G~~p~~~~l---~l~~~gl~~~~~~G~I~Vd~~~~-Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~ 381 (519)
T 3qfa_A 306 TVMLAIGRDACTRKI---GLETVGVKINEKTGKIPVTDEEQ-TNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGS 381 (519)
T ss_dssp EEEECSCEEESCSSS---CSTTTTCCCCTTTCCBCCCTTSB-CSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCcccCCCC---ChhhcCcEEcCCCCeEeeCCCCc-cCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 999999999985321 1111122223 345566666544 7899999999876 3 3446889999999999998753
No 51
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.95 E-value=4.5e-27 Score=244.98 Aligned_cols=309 Identities=14% Similarity=0.085 Sum_probs=191.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcc-----cCCCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFE-----FSDYPWPERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|+..+......+. +..+.++... .....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~-~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGE-GVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGG-GCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCC-CCccC
Confidence 45999999999999999999 899999999998999998742 223221110000000 1111111000 00112
Q ss_pred hHHHH-----------HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeE
Q 041145 83 HVELL-----------DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQ 151 (522)
Q Consensus 83 ~~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (522)
..++. ..+..+.++.++ .+..++.+ .++ ...+.|...+++ ..
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i~-----------------------~~~~~v~~~~G~-~~ 133 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEGS-FET-----------------------AHSIRVNGLDGK-QE 133 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEE-EEE-----------------------TTEEEEEETTSC-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-Eee-----------------------CCEEEEEecCCc-eE
Confidence 22222 223445555565 45555433 232 223445443331 24
Q ss_pred EEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcC
Q 041145 152 WYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQ 231 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~ 231 (522)
++.||+||+|||. .|..|+++ |.+. ..++++.++..+ ...+|+|+|||+|.+|+|+|..+++.+.
T Consensus 134 ~~~~d~lviAtG~---~p~~p~~~---g~~~--~~v~t~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~~g~ 198 (468)
T 2qae_A 134 MLETKKTIIATGS---EPTELPFL---PFDE--KVVLSSTGALAL-------PRVPKTMVVIGGGVIGLELGSVWARLGA 198 (468)
T ss_dssp EEEEEEEEECCCE---EECCBTTB---CCCS--SSEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEcCEEEECCCC---CcCCCCCC---CCCc--CceechHHHhhc-------ccCCceEEEECCCHHHHHHHHHHHHhCC
Confidence 7999999999995 47888888 7653 135666554432 1257999999999999999999999865
Q ss_pred CCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCccc
Q 041145 232 GPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVK 311 (522)
Q Consensus 232 ~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+||++.|.+. ++|..+ ..
T Consensus 199 -----~Vtlv~~~~~-~l~~~d---------------------------------------~~----------------- 216 (468)
T 2qae_A 199 -----EVTVVEFAPR-CAPTLD---------------------------------------ED----------------- 216 (468)
T ss_dssp -----EEEEECSSSS-SSTTSC---------------------------------------HH-----------------
T ss_pred -----EEEEEecCCc-ccccCC---------------------------------------HH-----------------
Confidence 5999999875 223211 00
Q ss_pred CCCCCCCccccccccccccccCcchhhhc-ccCcEEEEeCc-eeEEecCc----EEec--CC--ceeeccEEEEeccCCC
Q 041145 312 FGLKPDHPFEEDYASCQMAILPENFFSEA-EKGNILFKRAS-KWWFWSGG----IEFE--DK--SKLEADVVLLATGYDG 381 (522)
Q Consensus 312 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~v~~~~-i~~~~~~~----v~~~--dG--~~~~~D~VI~ATG~~~ 381 (522)
+.+.+.+.+ ++.+|+++.+. +.+++.++ +.++ || +++++|.||+|||+++
T Consensus 217 --------------------~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 217 --------------------VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp --------------------HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred --------------------HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 011122334 56678888876 77776532 4555 77 5799999999999999
Q ss_pred CccccccCCCcccccccCcccccccccccccCCCCceeEeecccc--cchhhHHHHHHHHHHHHhcCCC
Q 041145 382 KKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET--VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 382 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~--~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+..+. .....++..++.+.+.+..++ .++.||||++|++.. +...+.|..||+.+|..+.|+.
T Consensus 277 ~~~~l---~l~~~gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 341 (468)
T 2qae_A 277 FTGGL---GLDKINVAKNERGFVKIGDHF-ETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKP 341 (468)
T ss_dssp CCTTS---CHHHHTCCBCTTSCBCCCTTS-BCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCC---CchhcCCccCCCCCEeECCCc-ccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCC
Confidence 85321 101111222334556666654 468999999998876 3346889999999999998753
No 52
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.95 E-value=2.6e-27 Score=242.13 Aligned_cols=286 Identities=15% Similarity=0.145 Sum_probs=186.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC--CcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY--DPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .|. +|+|||+++.++ |....+ ++.+.. ... ++ ..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~~--~~~~~~-~~~--~~---~~~------ 65 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPPL--SKDFMA-HGD--AE---KIR------ 65 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGGG--GTHHHH-HCC--GG---GSB------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCCC--CHHHhC-CCc--hh---hhh------
Confidence 46999999999999999999 666 599999987542 111100 000000 000 00 000
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
++ .++++++ .+.++++|+.++. + .+.|++.+++ ++.||+||+|||.
T Consensus 66 ---~~-~~~~~~v--~~~~~~~v~~i~~--~---------------------~~~v~~~~g~---~~~~d~lviAtG~-- 111 (408)
T 2gqw_A 66 ---LD-CKRAPEV--EWLLGVTAQSFDP--Q---------------------AHTVALSDGR---TLPYGTLVLATGA-- 111 (408)
T ss_dssp ---CC-CTTSCSC--EEEETCCEEEEET--T---------------------TTEEEETTSC---EEECSEEEECCCE--
T ss_pred ---HH-HHHHCCC--EEEcCCEEEEEEC--C---------------------CCEEEECCCC---EEECCEEEECCCC--
Confidence 01 2234555 6778888988875 2 2467776554 7999999999995
Q ss_pred CCCCCCCC-CCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 167 DIPRMPAF-PANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 167 ~~p~~p~~-p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+.|++ | |.+ . .+++.....+... .......+|+|+|||+|.+|+|+|..+++.+. +||++.|.+
T Consensus 112 -~~~~~~i~~---G~~--~-~v~~~~~~~~~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtlv~~~~ 178 (408)
T 2gqw_A 112 -APRALPTLQ---GAT--M-PVHTLRTLEDARR-IQAGLRPQSRLLIVGGGVIGLELAATARTAGV-----HVSLVETQP 178 (408)
T ss_dssp -EECCCGGGT---TCS--S-CEEECCSHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSS
T ss_pred -CCCCCCccC---CCC--C-cEEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC-----EEEEEEeCC
Confidence 4888888 8 875 2 2444333322110 00112358999999999999999999999864 599999987
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.. +|+.. + ..
T Consensus 179 ~~-l~~~~----~----------------------------------~~------------------------------- 188 (408)
T 2gqw_A 179 RL-MSRAA----P----------------------------------AT------------------------------- 188 (408)
T ss_dssp SS-STTTS----C----------------------------------HH-------------------------------
T ss_pred cc-ccccc----C----------------------------------HH-------------------------------
Confidence 52 22100 0 00
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCccccc
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIM 404 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~ 404 (522)
+.+.+.+.+++.+|+++.+. +.+++++.|+++||+++++|.||+|||++++..+..-. ++.. +++ +
T Consensus 189 ------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-----gl~~-~~g-i 255 (408)
T 2gqw_A 189 ------LADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAA-----GLAC-DDG-I 255 (408)
T ss_dssp ------HHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHH-----TCCB-SSS-E
T ss_pred ------HHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhC-----CCCC-CCC-E
Confidence 01112233456678888886 88887557899999999999999999999985332111 1111 233 5
Q ss_pred ccccccccCCCCceeEeecccccc-----------hhhHHHHHHHHHHHHhcCCC
Q 041145 405 PLYRGTIHPLIPNMAFVGYIETVS-----------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 405 ~l~~~~~~~~~pni~~vG~~~~~~-----------~~~~ae~qa~~~a~~l~g~~ 448 (522)
.+..++ .++.||||++|++.... .++.|..||+.+|+.+.|..
T Consensus 256 ~Vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 256 FVDAYG-RTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp ECCTTC-BCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred EECCCC-ccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 666554 46899999999765432 35689999999999998764
No 53
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.95 E-value=5.4e-27 Score=245.14 Aligned_cols=307 Identities=15% Similarity=0.104 Sum_probs=193.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCC----CcccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRC----DFEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|...+..... .-.+..+.++.. ......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~--~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP--EPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 46999999999999999999 899999999988999988642 222211100000 000111111111 111223
Q ss_pred HHHHHH-----------HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-----
Q 041145 84 VELLDY-----------LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN----- 147 (522)
Q Consensus 84 ~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----- 147 (522)
..+..+ +...+++.++ .+..++.+. ++ .+.+.|+..++
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~-----------------------~~~v~v~~~~g~~~~~ 137 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF-LD-----------------------PHHLEVSLTAGDAYEQ 137 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE-EE-----------------------TTEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE-cc-----------------------CCEEEEEecCCccccc
Confidence 333222 3344555565 455555433 21 23455554333
Q ss_pred ---Ce-eEEEEECEEEEeeeccCCCCCCCC-CCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHH
Q 041145 148 ---QA-IQWYGFELLVMCIGKFGDIPRMPA-FPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDL 222 (522)
Q Consensus 148 ---~~-~~~~~~d~vViAtG~~s~~p~~p~-~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~di 222 (522)
.+ ..++.||+||+|||.. |..|+ +| . + ..++++.+...+. ..+|+|+|||+|.+|+|+
T Consensus 138 ~~~~g~~~~i~ad~lViAtGs~---p~~~~~i~---~-~---~~v~~~~~~~~~~-------~~~~~vvViGgG~ig~E~ 200 (482)
T 1ojt_A 138 AAPTGEKKIVAFKNCIIAAGSR---VTKLPFIP---E-D---PRIIDSSGALALK-------EVPGKLLIIGGGIIGLEM 200 (482)
T ss_dssp EEEEEEEEEEEEEEEEECCCEE---ECCCSSCC---C-C---TTEECHHHHTTCC-------CCCSEEEEESCSHHHHHH
T ss_pred ccccCcceEEEcCEEEECCCCC---CCCCCCCC---c-c---CcEEcHHHHhccc-------ccCCeEEEECCCHHHHHH
Confidence 01 2479999999999965 66665 44 2 1 2466666654421 247999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHH
Q 041145 223 AVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESY 302 (522)
Q Consensus 223 a~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
|..+++.+. +||++.|.+.. +|..+ ..
T Consensus 201 A~~l~~~G~-----~Vtlv~~~~~~-l~~~~---------------------------------------~~-------- 227 (482)
T 1ojt_A 201 GTVYSTLGS-----RLDVVEMMDGL-MQGAD---------------------------------------RD-------- 227 (482)
T ss_dssp HHHHHHHTC-----EEEEECSSSSS-STTSC---------------------------------------HH--------
T ss_pred HHHHHHcCC-----eEEEEEECCcc-ccccC---------------------------------------HH--------
Confidence 999999865 59999998762 22211 00
Q ss_pred HhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecC----CceeeccEE
Q 041145 303 LVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFED----KSKLEADVV 373 (522)
Q Consensus 303 ~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~d----G~~~~~D~V 373 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ .|+++| |+++++|.|
T Consensus 228 -----------------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~v 278 (482)
T 1ojt_A 228 -----------------------------LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAV 278 (482)
T ss_dssp -----------------------------HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCE
T ss_pred -----------------------------HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEE
Confidence 11112234556789999886 7777643 267777 778999999
Q ss_pred EEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCCC
Q 041145 374 LLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 374 I~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~~ 448 (522)
|+|||++|+..+. ...-.++..++++.+.+...+ .++.||||++|++.+.. ..+.|..||+.+|..+.|..
T Consensus 279 v~a~G~~p~~~~l---~~~~~gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 350 (482)
T 1ojt_A 279 LVAAGRAPNGKLI---SAEKAGVAVTDRGFIEVDKQM-RTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK 350 (482)
T ss_dssp EECCCEEECGGGT---TGGGTTCCCCTTSCCCCCTTS-BCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred EECcCCCcCCCCC---ChhhcCceeCCCCCEeeCCCc-ccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC
Confidence 9999999995331 111112222334556666654 46899999999887643 35789999999999998753
No 54
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.95 E-value=2.7e-27 Score=240.38 Aligned_cols=289 Identities=15% Similarity=0.143 Sum_probs=191.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC--CCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH--YDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .| .+|+++|+++ |..|....++.. + .......++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~~-------------~-------~~~~~~~~~ 61 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLSTG-------------F-------SKNKDADGL 61 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGGT-------------T-------TTTCCHHHH
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccHH-------------H-------hCCCCHHHh
Confidence 46999999999999999999 56 5789999875 444432111100 0 111223344
Q ss_pred H-HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 87 L-DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 87 ~-~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
. .++..+++++++ .+.++++|+.++. + .+.|++.++ ++.||+||+|||.
T Consensus 62 ~~~~~~~~~~~~~v--~~~~~~~v~~i~~--~---------------------~~~v~~~~~----~~~~d~lviAtG~- 111 (384)
T 2v3a_A 62 AMAEPGAMAEQLNA--RILTHTRVTGIDP--G---------------------HQRIWIGEE----EVRYRDLVLAWGA- 111 (384)
T ss_dssp EEECHHHHHHHTTC--EEECSCCCCEEEG--G---------------------GTEEEETTE----EEECSEEEECCCE-
T ss_pred hccCHHHHHHhCCc--EEEeCCEEEEEEC--C---------------------CCEEEECCc----EEECCEEEEeCCC-
Confidence 3 245666777777 5777888888875 2 235665322 6899999999995
Q ss_pred CCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 166 GDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 166 s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|..|++| |.+. ..++++.++.+.... ......+|+|+|||+|.+|+|+|..+++.+. +||++.|.+
T Consensus 112 --~p~~p~i~---g~~~--~~v~~~~~~~~~~~~-~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~-----~Vtlv~~~~ 178 (384)
T 2v3a_A 112 --EPIRVPVE---GDAQ--DALYPINDLEDYARF-RQAAAGKRRVLLLGAGLIGCEFANDLSSGGY-----QLDVVAPCE 178 (384)
T ss_dssp --EECCCCCB---STTT--TCEEECSSHHHHHHH-HHHHTTCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSS
T ss_pred --CcCCCCCC---CcCc--CCEEEECCHHHHHHH-HHhhccCCeEEEECCCHHHHHHHHHHHhCCC-----eEEEEecCc
Confidence 48888888 8652 345666555432110 0122358999999999999999999999865 599999887
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.. ++... + ..
T Consensus 179 ~~-~~~~~----~----------------------------------~~------------------------------- 188 (384)
T 2v3a_A 179 QV-MPGLL----H----------------------------------PA------------------------------- 188 (384)
T ss_dssp SS-STTTS----C----------------------------------HH-------------------------------
T ss_pred ch-hhccc----C----------------------------------HH-------------------------------
Confidence 52 22110 0 00
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCc
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADS 400 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~ 400 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ .|+++||+++++|.||+|||++++..+..-. ++..+
T Consensus 189 ------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~-----g~~~~- 256 (384)
T 2v3a_A 189 ------AAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA-----GLAVN- 256 (384)
T ss_dssp ------HHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHT-----TCCBS-
T ss_pred ------HHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHC-----CCCCC-
Confidence 11112233456678888876 7777542 3778899999999999999999985332111 12112
Q ss_pred ccccccccccccCCCCceeEeeccccc-----chhhHHHHHHHHHHHHhcCCC
Q 041145 401 SGIMPLYRGTIHPLIPNMAFVGYIETV-----SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 401 ~~~~~l~~~~~~~~~pni~~vG~~~~~-----~~~~~ae~qa~~~a~~l~g~~ 448 (522)
++ +.+...+ .++.||||++|++... ..+..|..||+.+|+.+.|..
T Consensus 257 ~g-i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~ 307 (384)
T 2v3a_A 257 RG-IVVDRSL-RTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP 307 (384)
T ss_dssp SS-EEECTTC-BCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CC-EEECCCC-CCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 34 6666654 4789999999987531 124668999999999998753
No 55
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.95 E-value=1.1e-27 Score=248.04 Aligned_cols=299 Identities=15% Similarity=0.121 Sum_probs=186.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc-----ccCCCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF-----EFSDYPWPERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+......+ ....+.+... ....+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~--~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT--INKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE--EEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC--CCccC
Confidence 45999999999999999999 89999999997 789998641 22322110000000 0011111000 01122
Q ss_pred hHHHHHHHHHH-----------HHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeE
Q 041145 83 HVELLDYLHGY-----------AVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQ 151 (522)
Q Consensus 83 ~~~~~~yl~~~-----------~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (522)
..++..+.+.+ .++.++ .+..+ +++.++. +.|.+ ++ +
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~-------------------------~~v~~-~g---~ 128 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNV--DVIKG-FARFVDA-------------------------KTLEV-NG---E 128 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CCEEEET-------------------------TEEEE-TT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEecC-------------------------CEEEE-CC---E
Confidence 33343333322 233343 23323 2233321 14555 33 3
Q ss_pred EEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcC
Q 041145 152 WYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQ 231 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~ 231 (522)
++.||+||+|||. .|..|++| |.+. ++++.++..+ ...+|+|+|||+|.+|+|+|..+++.+.
T Consensus 129 ~~~~d~lviAtGs---~p~~p~i~---g~~~----~~~~~~~~~~-------~~~~~~vvViGgG~~g~e~A~~l~~~g~ 191 (450)
T 1ges_A 129 TITADHILIATGG---RPSHPDIP---GVEY----GIDSDGFFAL-------PALPERVAVVGAGYIGVELGGVINGLGA 191 (450)
T ss_dssp EEEEEEEEECCCE---EECCCCST---TGGG----SBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEeCEEEECCCC---CCCCCCCC---Cccc----eecHHHhhhh-------hhcCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 7999999999994 58888888 8742 3444444321 1247899999999999999999999865
Q ss_pred CCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCccc
Q 041145 232 GPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVK 311 (522)
Q Consensus 232 ~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+||++.|.+.. +|..+ ..+
T Consensus 192 -----~Vtlv~~~~~~-l~~~~---------------------------------------~~~---------------- 210 (450)
T 1ges_A 192 -----KTHLFEMFDAP-LPSFD---------------------------------------PMI---------------- 210 (450)
T ss_dssp -----EEEEECSSSSS-STTSC---------------------------------------HHH----------------
T ss_pred -----EEEEEEeCCch-hhhhh---------------------------------------HHH----------------
Confidence 59999988752 22111 000
Q ss_pred CCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCceeeccEEEEeccCCCCccc
Q 041145 312 FGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSKLEADVVLLATGYDGKKKL 385 (522)
Q Consensus 312 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~ATG~~~~~~l 385 (522)
.+.+.+.+++.+|+++.+. +.+++.+ .|.++||+++++|.||+|||++++...
T Consensus 211 ---------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 269 (450)
T 1ges_A 211 ---------------------SETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDN 269 (450)
T ss_dssp ---------------------HHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred ---------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCC
Confidence 0111233445577888775 7777642 377889999999999999999998521
Q ss_pred cccCCCcccccccCcccccccccccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhcCC
Q 041145 386 QSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~g~ 447 (522)
+.....++..++++.+.+...+ .++.||||++|++.+ +...+.|..||+.+|..+.|.
T Consensus 270 ---l~~~~~gl~~~~~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 270 ---INLEAAGVKTNEKGYIVVDKYQ-NTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp ---SCHHHHTCCBCTTSCBCCCTTS-BCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred ---CCchhcCceECCCCCEeECCCC-ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 1001112222345556666654 478999999998765 334688999999999999874
No 56
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.95 E-value=1.1e-27 Score=249.05 Aligned_cols=300 Identities=17% Similarity=0.124 Sum_probs=188.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc----ccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF----EFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||+++ +||+|.+. +.|...+......+ .+..+.++ . ......
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~--~~~~~~ 81 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-A--KPELDL 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-C--CCEECH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-C--CCCcCH
Confidence 46999999999999999999 899999999987 99998642 23322111000000 01111111 0 111222
Q ss_pred HHHH-------HH----HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEE
Q 041145 84 VELL-------DY----LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQW 152 (522)
Q Consensus 84 ~~~~-------~y----l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 152 (522)
.++. ++ +....++.++ .+..++.+ .++. +.|++. + .+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~-~~~~-------------------------~~v~v~-g---~~ 129 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFAR-LVGP-------------------------KEVEVG-G---ER 129 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCEE-EEET-------------------------TEEEET-T---EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeEE-EccC-------------------------CEEEEc-c---EE
Confidence 2222 22 2334455555 44445433 2221 135554 3 37
Q ss_pred EEECEEEEeeeccCCCCCCCC-CCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcC
Q 041145 153 YGFELLVMCIGKFGDIPRMPA-FPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQ 231 (522)
Q Consensus 153 ~~~d~vViAtG~~s~~p~~p~-~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~ 231 (522)
+.||+||+|||. .|..|+ +| | + +.++++.++..+ ....+|+|+|||+|.+|+|+|..+++.+.
T Consensus 130 ~~~d~lViATGs---~p~~p~gi~---~-~---~~v~~~~~~~~l------~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 193 (464)
T 2eq6_A 130 YGAKSLILATGS---EPLELKGFP---F-G---EDVWDSTRALKV------EEGLPKRLLVIGGGAVGLELGQVYRRLGA 193 (464)
T ss_dssp EEEEEEEECCCE---EECCBTTBC---C-S---SSEECHHHHTCG------GGCCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEeCEEEEcCCC---CCCCCCCCC---C-C---CcEEcHHHHHhh------hhhcCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 999999999995 477775 66 5 2 246677666553 22257999999999999999999998864
Q ss_pred CCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCccc
Q 041145 232 GPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVK 311 (522)
Q Consensus 232 ~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+||++.|.+. ++|..+ ..+
T Consensus 194 -----~Vtlv~~~~~-~l~~~~---------------------------------------~~~---------------- 212 (464)
T 2eq6_A 194 -----EVTLIEYMPE-ILPQGD---------------------------------------PET---------------- 212 (464)
T ss_dssp -----EEEEECSSSS-SSTTSC---------------------------------------HHH----------------
T ss_pred -----eEEEEEcCCc-cccccC---------------------------------------HHH----------------
Confidence 5999999875 222211 000
Q ss_pred CCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEec-C--Cc--eeeccEEEEeccCCC
Q 041145 312 FGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFE-D--KS--KLEADVVLLATGYDG 381 (522)
Q Consensus 312 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~-d--G~--~~~~D~VI~ATG~~~ 381 (522)
.+.+.+.+++.+|+++.+. +.+++.++ |.++ + |+ ++++|.||+|||+++
T Consensus 213 ---------------------~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 213 ---------------------AALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp ---------------------HHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred ---------------------HHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 1111233446678888875 77776432 5665 7 87 799999999999999
Q ss_pred CccccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCCC
Q 041145 382 KKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 382 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~~ 448 (522)
+..+. .....++..++++.+.+...+ .++.||||++|++.+.. ..+.|..||+.+|..+.|..
T Consensus 272 ~~~~l---~l~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 335 (464)
T 2eq6_A 272 RTEGL---GLEKAGVKVDERGFIRVNARM-ETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKD 335 (464)
T ss_dssp SCTTS---SHHHHTCCBCTTSCBCCCTTC-BCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCC---ChhhcCceecCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 85321 101111222334556666554 47899999999887543 35789999999999998753
No 57
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-27 Score=249.24 Aligned_cols=305 Identities=17% Similarity=0.130 Sum_probs=188.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc----ccCCCCCCCC---CC-CC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF----EFSDYPWPER---DD-AS 79 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~----~~~~~~~~~~---~~-~~ 79 (522)
.+||+|||||++|+++|..| .|.+|+|||++ .+||+|.+. +.|...+......+ ....+.+... .. ..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 56999999999999999999 89999999997 699999641 22321110000000 0011111100 00 01
Q ss_pred CCChHHHHHHHHH-----------HHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC
Q 041145 80 FPSHVELLDYLHG-----------YAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ 148 (522)
Q Consensus 80 ~~~~~~~~~yl~~-----------~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 148 (522)
.....++..+.+. ..++.++ .+..+ +++.+ + ...+.|...+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i----~-------------------~~~~~v~~~~g~ 143 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFN----K-------------------DGNVEVQKRDNT 143 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEEC----T-------------------TSCEEEEESSSC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEe----e-------------------CCEEEEEeCCCc
Confidence 1223333333322 2333333 22222 23322 1 233555543331
Q ss_pred eeEEEEECEEEEeeeccCCCCCCC-CCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHH
Q 041145 149 AIQWYGFELLVMCIGKFGDIPRMP-AFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECA 227 (522)
Q Consensus 149 ~~~~~~~d~vViAtG~~s~~p~~p-~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~ 227 (522)
..++.||+||+|||. .|..| ++| |.+. ++++.++..+ ...+|+|+|||+|.+|+|+|..++
T Consensus 144 -~~~~~~d~lviAtGs---~p~~p~~i~---g~~~----~~~~~~~~~l-------~~~~~~vvViGgG~ig~E~A~~l~ 205 (479)
T 2hqm_A 144 -TEVYSANHILVATGG---KAIFPENIP---GFEL----GTDSDGFFRL-------EEQPKKVVVVGAGYIGIELAGVFH 205 (479)
T ss_dssp -CEEEEEEEEEECCCE---EECCCTTST---TGGG----SBCHHHHHHC-------SSCCSEEEEECSSHHHHHHHHHHH
T ss_pred -EEEEEeCEEEEcCCC---CCCCCCCCC---Cccc----ccchHHHhcc-------cccCCeEEEECCCHHHHHHHHHHH
Confidence 236899999999994 58888 899 8742 3444443321 135799999999999999999999
Q ss_pred HhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcC
Q 041145 228 EANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKL 307 (522)
Q Consensus 228 ~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
+.+. +||++.|.+..+ |..+ ..+
T Consensus 206 ~~g~-----~Vtlv~~~~~~l-~~~d---------------------------------------~~~------------ 228 (479)
T 2hqm_A 206 GLGS-----ETHLVIRGETVL-RKFD---------------------------------------ECI------------ 228 (479)
T ss_dssp HTTC-----EEEEECSSSSSC-TTSC---------------------------------------HHH------------
T ss_pred HcCC-----ceEEEEeCCccc-cccC---------------------------------------HHH------------
Confidence 9865 599999987632 2211 000
Q ss_pred CcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC------cEEecCC-ceeeccEEEEeccC
Q 041145 308 PLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG------GIEFEDK-SKLEADVVLLATGY 379 (522)
Q Consensus 308 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~------~v~~~dG-~~~~~D~VI~ATG~ 379 (522)
.+.+.+.+++.+|+++.+. +.+++.+ .|.++|| +++++|.||+|||+
T Consensus 229 -------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 229 -------------------------QNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp -------------------------HHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred -------------------------HHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 1111233445678888876 7777642 3778899 78999999999999
Q ss_pred CCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcCC
Q 041145 380 DGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 380 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g~ 447 (522)
+|+..| .....++..++++.+.+...+ .++.||||++|++.+. ...+.|..||+.+|..+.|.
T Consensus 284 ~p~~~l----~l~~~gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 284 KSHLGM----GSENVGIKLNSHDQIIADEYQ-NTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp EECCCS----SGGGGTCCBCTTSCBCCCTTC-BCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCcccc----ChhhcCceECCCCCEeECCCC-ccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 998522 001112222345556666554 5789999999988653 34688999999999998764
No 58
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.94 E-value=3.6e-27 Score=246.69 Aligned_cols=308 Identities=18% Similarity=0.214 Sum_probs=191.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC---C------CCCcccCCC-ccCcccccCCCCC----cccCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT---N------SIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPE 74 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~---~------~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 74 (522)
.+||+|||||++|+++|..| .|++|+|||+. + .+||+|.+. +.|+..+..+... .....+.+..
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 67999999999999999999 89999999942 1 389999752 3343222111100 0011122221
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCC------c-CceE-eceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe
Q 041145 75 RDDASFPSHVELLDYLHGYAVHFDV------L-KYIK-FNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET 146 (522)
Q Consensus 75 ~~~~~~~~~~~~~~yl~~~~~~~~l------~-~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 146 (522)
.. ....+..++..+.+.+.+++.. . ..+. +...+..++ ...+.|...+
T Consensus 89 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~-----------------------~~~v~v~~~~ 144 (483)
T 3dgh_A 89 DD-KIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD-----------------------SHTLLAKLKS 144 (483)
T ss_dssp CC-CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE-----------------------TTEEEEECTT
T ss_pred CC-cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEcc-----------------------CCEEEEEeCC
Confidence 11 2344566666666655543310 0 0111 122222221 1233343322
Q ss_pred CCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHH
Q 041145 147 NQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVEC 226 (522)
Q Consensus 147 ~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l 226 (522)
+ .+++.||+||+||| +.|..|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|+|..+
T Consensus 145 g--~~~~~~d~lviATG---s~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l 206 (483)
T 3dgh_A 145 G--ERTITAQTFVIAVG---GRPRYPDIP---GAVEY---GITSDDLFSL-------DREPGKTLVVGAGYIGLECAGFL 206 (483)
T ss_dssp C--CEEEEEEEEEECCC---EEECCCSST---THHHH---CBCHHHHTTC-------SSCCCEEEEECCSHHHHHHHHHH
T ss_pred C--eEEEEcCEEEEeCC---CCcCCCCCC---Ccccc---cCcHHHHhhh-------hhcCCcEEEECCCHHHHHHHHHH
Confidence 2 24799999999999 458899999 87643 2455544432 13568999999999999999999
Q ss_pred HHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhc
Q 041145 227 AEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWK 306 (522)
Q Consensus 227 ~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (522)
++.+. +||++.|.. ++|..+ ..
T Consensus 207 ~~~g~-----~Vtlv~~~~--~l~~~d---------------------------------------~~------------ 228 (483)
T 3dgh_A 207 KGLGY-----EPTVMVRSI--VLRGFD---------------------------------------QQ------------ 228 (483)
T ss_dssp HHTTC-----EEEEEESSC--SSTTSC---------------------------------------HH------------
T ss_pred HHcCC-----EEEEEeCCC--CCcccC---------------------------------------HH------------
Confidence 99865 599998843 222221 00
Q ss_pred CCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec--Cc---EEecCCc-----eeeccEEEE
Q 041145 307 LPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--GG---IEFEDKS-----KLEADVVLL 375 (522)
Q Consensus 307 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~---v~~~dG~-----~~~~D~VI~ 375 (522)
+.+.+.+.+++.+|+++.+. +.+++. ++ |.+.+|+ ++++|.||+
T Consensus 229 -------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~ 283 (483)
T 3dgh_A 229 -------------------------MAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLW 283 (483)
T ss_dssp -------------------------HHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEE
T ss_pred -------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEE
Confidence 01112233456677888775 667753 32 6676664 689999999
Q ss_pred eccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccc-c-cchhhHHHHHHHHHHHHhcCCC
Q 041145 376 ATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIE-T-VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 376 ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~-~-~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
|||++|+..+.. ....++..++ +.+.+...+ .++.||||++|++. + +...+.|..||+.+|+.+.|..
T Consensus 284 a~G~~p~~~~l~---l~~~gl~~~~-G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (483)
T 3dgh_A 284 AIGRKGLVDDLN---LPNAGVTVQK-DKIPVDSQE-ATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGS 353 (483)
T ss_dssp CSCEEECCGGGT---GGGTTCCCBT-TBBCCCTTC-BCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CcccccCcCcCC---chhcCccccC-CEEEECcCC-ccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 999999854321 1111222233 566666654 47899999999885 3 4446889999999999998763
No 59
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=4.7e-27 Score=245.13 Aligned_cols=309 Identities=16% Similarity=0.111 Sum_probs=193.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcc-----cCCCCCCCCC-----C
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFE-----FSDYPWPERD-----D 77 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~ 77 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|...+......+. +..+.++... .
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 45999999999999999999 799999999998999998641 222211100000000 0000000000 0
Q ss_pred CCCCChH----HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEE
Q 041145 78 ASFPSHV----ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWY 153 (522)
Q Consensus 78 ~~~~~~~----~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 153 (522)
..+.... .+..++...+++.++ .+.+++.+. ++ ...+.|++.+++ ..++
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~-----------------------~~~~~v~~~~G~-~~~i 138 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-VS-----------------------PSEISVDTIEGE-NTVV 138 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-EE-----------------------TTEEEECCSSSC-CEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-ec-----------------------CCEEEEEeCCCc-eEEE
Confidence 0000111 122334455566666 566666543 32 234555443331 2479
Q ss_pred EECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCC
Q 041145 154 GFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGP 233 (522)
Q Consensus 154 ~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~ 233 (522)
.||+||+|||.. |..|+++ |.+. ..++++.+...+. ..+|+|+|||+|.+|+|+|..+++.+.
T Consensus 139 ~~d~lIiAtGs~---p~~p~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~~~g~-- 201 (470)
T 1dxl_A 139 KGKHIIIATGSD---VKSLPGV---TIDE--KKIVSSTGALALS-------EIPKKLVVIGAGYIGLEMGSVWGRIGS-- 201 (470)
T ss_dssp ECSEEEECCCEE---ECCBTTB---CCCS--SSEECHHHHTTCS-------SCCSEEEESCCSHHHHHHHHHHHHHTC--
T ss_pred EcCEEEECCCCC---CCCCCCC---CCCc--ccEEeHHHhhhhh-------hcCCeEEEECCCHHHHHHHHHHHHcCC--
Confidence 999999999954 7888888 7653 1366666554421 257999999999999999999999865
Q ss_pred CCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCC
Q 041145 234 NGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFG 313 (522)
Q Consensus 234 ~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
+||++.|.+.. +|..+ ..+.
T Consensus 202 ---~Vtli~~~~~~-l~~~~---------------------------------------~~~~----------------- 221 (470)
T 1dxl_A 202 ---EVTVVEFASEI-VPTMD---------------------------------------AEIR----------------- 221 (470)
T ss_dssp ---EEEEECSSSSS-STTSC---------------------------------------HHHH-----------------
T ss_pred ---cEEEEEcCCcc-ccccc---------------------------------------HHHH-----------------
Confidence 59999998752 22211 0000
Q ss_pred CCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEec---CC--ceeeccEEEEeccCCCCc
Q 041145 314 LKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFE---DK--SKLEADVVLLATGYDGKK 383 (522)
Q Consensus 314 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~---dG--~~~~~D~VI~ATG~~~~~ 383 (522)
+.+.+.+++.+|+++.+. +.+++.++ +.++ || +++++|.||+|||++++.
T Consensus 222 --------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 222 --------------------KQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp --------------------HHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred --------------------HHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 111233445677787775 77776532 4444 55 579999999999999985
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
.+.. ....++..++.+.+.+...+. ++.||||++|++.+.. ..+.|..||+.+|..+.|.
T Consensus 282 ~~l~---~~~~gl~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 282 SGLN---LDKIGVETDKLGRILVNERFS-TNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp TTSC---CTTTTCCBCSSSCBCCCTTCB-CSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCC---chhcCCccCCCCCEeECcCCc-cCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 3311 111122223345566666544 7899999999886643 3578999999999999876
No 60
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.94 E-value=5e-27 Score=245.31 Aligned_cols=302 Identities=17% Similarity=0.167 Sum_probs=190.6
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCC----CcccCCCCCCCCCCCCCCC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRC----DFEFSDYPWPERDDASFPS 82 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 82 (522)
..+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+..... ...+..+.++.. .....
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC--EGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC--CCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC--CCccC
Confidence 367999999999999999999 89999999976 799998642 233222111000 001122222221 22345
Q ss_pred hHHHHHHHHHHHHhc-----------CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeE
Q 041145 83 HVELLDYLHGYAVHF-----------DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQ 151 (522)
Q Consensus 83 ~~~~~~yl~~~~~~~-----------~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (522)
..++..+.+.+.+++ ++ .+..+ ++..+ + ...+.|.. ++ .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~~----~-------------------~~~~~v~~-~g---~ 145 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIRG-HAAFT----S-------------------DPKPTIEV-SG---K 145 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEC----S-------------------CSSCEEEE-TT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEe----e-------------------CCeEEEEE-CC---E
Confidence 555666655544332 22 11111 11111 1 23355652 33 3
Q ss_pred EEEECEEEEeeeccCCCCCCC---CCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHH
Q 041145 152 WYGFELLVMCIGKFGDIPRMP---AFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAE 228 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~~p---~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~ 228 (522)
++.||+||+|||. .|..| ++| |.+ ..+++..+..+. ..+|+|+|||+|.+|+|+|..+++
T Consensus 146 ~~~~d~lviAtG~---~p~~p~~~~i~---G~~----~~~~~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~ 208 (478)
T 3dk9_A 146 KYTAPHILIATGG---MPSTPHESQIP---GAS----LGITSDGFFQLE-------ELPGRSVIVGAGYIAVEMAGILSA 208 (478)
T ss_dssp EEECSCEEECCCE---EECCCCTTTST---TGG----GSBCHHHHTTCC-------SCCSEEEEECCSHHHHHHHHHHHH
T ss_pred EEEeeEEEEccCC---CCCCCCcCCCC---CCc----eeEchHHhhchh-------hcCccEEEECCCHHHHHHHHHHHH
Confidence 6999999999994 58888 888 876 234555554321 347999999999999999999999
Q ss_pred hcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCC
Q 041145 229 ANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLP 308 (522)
Q Consensus 229 ~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
.+. +||++.|.+..+ |..+ ..+
T Consensus 209 ~g~-----~Vtlv~~~~~~l-~~~d---------------------------------------~~~------------- 230 (478)
T 3dk9_A 209 LGS-----KTSLMIRHDKVL-RSFD---------------------------------------SMI------------- 230 (478)
T ss_dssp TTC-----EEEEECSSSSSC-TTSC---------------------------------------HHH-------------
T ss_pred cCC-----eEEEEEeCCccc-cccC---------------------------------------HHH-------------
Confidence 865 599999988633 3221 000
Q ss_pred cccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec--Cc----EEecC---C----ceeeccEEE
Q 041145 309 LVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--GG----IEFED---K----SKLEADVVL 374 (522)
Q Consensus 309 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~----v~~~d---G----~~~~~D~VI 374 (522)
.+.+.+.+++.+|+++.+. +.+++. ++ +.++| | +++++|.||
T Consensus 231 ------------------------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 231 ------------------------STNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ------------------------HHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ------------------------HHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 1111233446678888775 667653 23 55665 2 568999999
Q ss_pred EeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhcCC
Q 041145 375 LATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 375 ~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~g~ 447 (522)
+|||++++... +.....++..++++.+.+...+ .++.||||++|++.+ +...+.|..|++.+|+.+.|.
T Consensus 287 ~a~G~~p~~~~---l~l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 287 WAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQ-NTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp ECSCEEESCTT---SCGGGGTCCBCTTCCBCCCTTC-BCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred EeeccccCCCC---CCchhcCCeeCCCCCEeeCCCc-ccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 99999998531 1111112222345556666554 578999999998774 334688999999999999876
No 61
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.94 E-value=8.1e-28 Score=251.80 Aligned_cols=309 Identities=17% Similarity=0.163 Sum_probs=191.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEcc--------CCCCCcccCCC-ccCcccccCCCCC----cccCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEA--------TNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPER 75 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~--------~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 75 (522)
.+||+|||||++|+++|..| .|++|+|||+ ...+||+|.+. ++|+..+...... .....+.+...
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 57999999999999999999 8999999997 56799999752 3343322111100 11112222221
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCc-------CceE-eceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC
Q 041145 76 DDASFPSHVELLDYLHGYAVHFDVL-------KYIK-FNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN 147 (522)
Q Consensus 76 ~~~~~~~~~~~~~yl~~~~~~~~l~-------~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 147 (522)
. .......++..+.+.+.+++... ..+. +..++..+ + .. .+.+...
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~----~-------------------~~--~v~v~~~ 139 (488)
T 3dgz_A 86 Q-PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFV----D-------------------EH--TVRGVDK 139 (488)
T ss_dssp S-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEES----S-------------------SS--EEEEECT
T ss_pred C-cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc----c-------------------CC--eEEEEeC
Confidence 1 23455666666665554432100 0111 12222111 1 12 3444333
Q ss_pred Ce-eEEEEECEEEEeeeccCCCCCCCC-CCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHH
Q 041145 148 QA-IQWYGFELLVMCIGKFGDIPRMPA-FPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVE 225 (522)
Q Consensus 148 ~~-~~~~~~d~vViAtG~~s~~p~~p~-~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~ 225 (522)
++ .+++.||+|||||| +.|..|+ +| |.+.+ .+++.++..+ ...+++|+|||+|.+|+|+|..
T Consensus 140 ~g~~~~~~~d~lViATG---s~p~~p~~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A~~ 203 (488)
T 3dgz_A 140 GGKATLLSAEHIVIATG---GRPRYPTQVK---GALEY---GITSDDIFWL-------KESPGKTLVVGASYVALECAGF 203 (488)
T ss_dssp TSCEEEEEEEEEEECCC---EEECCCSSCB---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHHHHHHH
T ss_pred CCceEEEECCEEEEcCC---CCCCCCCCCC---Ccccc---cCcHHHHHhh-------hhcCCeEEEECCCHHHHHHHHH
Confidence 22 35799999999999 4588888 99 87542 2455544432 1356899999999999999999
Q ss_pred HHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhh
Q 041145 226 CAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVW 305 (522)
Q Consensus 226 l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
+++.+.+ ||++.|.+ ++|..+ ..
T Consensus 204 l~~~g~~-----Vtlv~~~~--~l~~~d---------------------------------------~~----------- 226 (488)
T 3dgz_A 204 LTGIGLD-----TTVMMRSI--PLRGFD---------------------------------------QQ----------- 226 (488)
T ss_dssp HHHTTCC-----EEEEESSC--SSTTSC---------------------------------------HH-----------
T ss_pred HHHcCCc-----eEEEEcCc--ccccCC---------------------------------------HH-----------
Confidence 9998654 99998864 222221 00
Q ss_pred cCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec--Cc---EEecC---Cc--eeeccEEE
Q 041145 306 KLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--GG---IEFED---KS--KLEADVVL 374 (522)
Q Consensus 306 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~---v~~~d---G~--~~~~D~VI 374 (522)
+.+.+.+.+++.+|+++.+. +.+++. ++ |.+.+ |+ ++++|.||
T Consensus 227 --------------------------~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi 280 (488)
T 3dgz_A 227 --------------------------MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVL 280 (488)
T ss_dssp --------------------------HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEE
T ss_pred --------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEE
Confidence 01112233456678888775 666653 22 55554 55 37899999
Q ss_pred EeccCCCCccccccCCCcccccccC-cccccccccccccCCCCceeEeeccc-c-cchhhHHHHHHHHHHHHhcCCC
Q 041145 375 LATGYDGKKKLQSILPKPFSSLLAD-SSGIMPLYRGTIHPLIPNMAFVGYIE-T-VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 375 ~ATG~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~pni~~vG~~~-~-~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+|||++|+..+.. ....++..+ +++.+.+...+. ++.||||++|++. + +...+.|..|++.+|..+.|..
T Consensus 281 ~a~G~~p~~~~l~---l~~~g~~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 281 WAIGRVPETRTLN---LEKAGISTNPKNQKIIVDAQEA-TSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp ECSCEEESCGGGT---GGGGTCCBCSSSCCBCCCTTSB-CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred EcccCCcccCcCC---ccccCcEecCCCCeEeECCCCc-cCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 9999999854321 111122223 355566665544 6899999999875 3 3346789999999999998753
No 62
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=1.6e-26 Score=239.95 Aligned_cols=304 Identities=16% Similarity=0.129 Sum_probs=190.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCC----cccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. +.|...+...... ..+..+.++.. ......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE--NVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC--SCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCccCH
Confidence 35899999999999999999 89999999998 799998642 2222111000000 00001111000 000111
Q ss_pred H-----------HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEE
Q 041145 84 V-----------ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQW 152 (522)
Q Consensus 84 ~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 152 (522)
. .+..++...+++.++ .+..++.+. ++ .+.+.|+..++ .++
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-id-----------------------~~~v~V~~~~G--~~~ 131 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAYF-VD-----------------------ANTVRVVNGDS--AQT 131 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEEE-EE-----------------------TTEEEEEETTE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEE-cc-----------------------CCeEEEEeCCC--cEE
Confidence 1 133344556666666 566665442 32 23455554322 247
Q ss_pred EEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCC
Q 041145 153 YGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQG 232 (522)
Q Consensus 153 ~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~ 232 (522)
+.||+||+|||. .|..|+++ |.+. .++++.+.... ...+|+|+|||+|.+|+|+|..+++.+.
T Consensus 132 i~~d~lViATGs---~p~~~~~~---g~~~---~v~~~~~~~~~-------~~~~~~vvViGgG~~g~e~A~~l~~~g~- 194 (455)
T 1ebd_A 132 YTFKNAIIATGS---RPIELPNF---KFSN---RILDSTGALNL-------GEVPKSLVVIGGGYIGIELGTAYANFGT- 194 (455)
T ss_dssp EECSEEEECCCE---EECCBTTB---CCCS---SEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC-
T ss_pred EEeCEEEEecCC---CCCCCCCC---Cccc---eEecHHHHhcc-------ccCCCeEEEECCCHHHHHHHHHHHHcCC-
Confidence 899999999995 47888888 7653 35666554332 1246999999999999999999999864
Q ss_pred CCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccC
Q 041145 233 PNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKF 312 (522)
Q Consensus 233 ~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
+||++.|.+.. +|..+ ..+
T Consensus 195 ----~Vtlv~~~~~~-l~~~~---------------------------------------~~~----------------- 213 (455)
T 1ebd_A 195 ----KVTILEGAGEI-LSGFE---------------------------------------KQM----------------- 213 (455)
T ss_dssp ----EEEEEESSSSS-STTSC---------------------------------------HHH-----------------
T ss_pred ----cEEEEEcCCcc-ccccC---------------------------------------HHH-----------------
Confidence 59999998752 22211 000
Q ss_pred CCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--cE--Eec---CCceeeccEEEEeccCCCCcc
Q 041145 313 GLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--GI--EFE---DKSKLEADVVLLATGYDGKKK 384 (522)
Q Consensus 313 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~v--~~~---dG~~~~~D~VI~ATG~~~~~~ 384 (522)
.+.+.+.+++.+|+++.+. +.+++.+ ++ .++ +|+++++|.||+|||++++..
T Consensus 214 --------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 214 --------------------AAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp --------------------HHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred --------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 0111233445678888775 7777642 23 443 456799999999999999853
Q ss_pred ccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 385 LQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 385 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
+. .....++..++++.+.+...+ .++.||||++|++.... ..+.|..||+.+|..+.|.
T Consensus 274 ~l---~~~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 274 EL---GLEQIGIKMTNRGLIEVDQQC-RTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp SS---STTTTTCCBCTTSCBCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred cC---ChhhcCCccCCCCCEeeCCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 31 111112222334556666654 47899999999886643 3578999999999999875
No 63
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.94 E-value=1e-27 Score=250.58 Aligned_cols=307 Identities=17% Similarity=0.104 Sum_probs=189.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc-----ccCCCCCCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF-----EFSDYPWPERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|+..+......+ .+..+.++... .....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~-~~~~~ 83 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG-DIKIN 83 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS-CEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC-CCccC
Confidence 46999999999999999999 899999999999999998642 22221110000000 01111110000 11122
Q ss_pred hHHHHHH-----------HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeE
Q 041145 83 HVELLDY-----------LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQ 151 (522)
Q Consensus 83 ~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (522)
..++..+ +...+++.++ .+.+++.+.. + ...+.|++.+++ .+
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~-----~-------------------~~~v~V~~~~G~-~~ 136 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE-----D-------------------ETKIRVTPVDGL-EG 136 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES-----S-------------------SSEEEEECCTTC-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc-----c-------------------CCeEEEEecCCC-cc
Confidence 3333332 3344455565 4666665431 2 234555544331 12
Q ss_pred E------EEECEEEEeeeccCCCCCCCCCCCCCCccccCC-ceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHH
Q 041145 152 W------YGFELLVMCIGKFGDIPRMPAFPANKGEEIFGG-KVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAV 224 (522)
Q Consensus 152 ~------~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g-~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~ 224 (522)
+ +.||+||+|||.. |. .+| |.+ +.+ .++|+.++..+. ..+|+|+|||+|.+|+|+|.
T Consensus 137 ~~~~~~~i~~d~lViAtGs~---p~--~~~---g~~-~~~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~ 200 (478)
T 1v59_A 137 TVKEDHILDVKNIIVATGSE---VT--PFP---GIE-IDEEKIVSSTGALSLK-------EIPKRLTIIGGGIIGLEMGS 200 (478)
T ss_dssp CCSSCEEEEEEEEEECCCEE---EC--CCT---TCC-CCSSSEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHH
T ss_pred cccccceEEeCEEEECcCCC---CC--CCC---CCC-CCCceEEcHHHHHhhh-------ccCceEEEECCCHHHHHHHH
Confidence 4 8999999999965 42 345 654 333 466766655431 24799999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHh
Q 041145 225 ECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLV 304 (522)
Q Consensus 225 ~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (522)
.+++.+. +||++.|.+.. +|..+ ..
T Consensus 201 ~l~~~g~-----~Vtlv~~~~~~-l~~~~---------------------------------------~~---------- 225 (478)
T 1v59_A 201 VYSRLGS-----KVTVVEFQPQI-GASMD---------------------------------------GE---------- 225 (478)
T ss_dssp HHHHTTC-----EEEEECSSSSS-SSSSC---------------------------------------HH----------
T ss_pred HHHHcCC-----EEEEEEeCCcc-ccccC---------------------------------------HH----------
Confidence 9999865 59999998762 22211 00
Q ss_pred hcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec--C----cEEec-----CCceeeccE
Q 041145 305 WKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--G----GIEFE-----DKSKLEADV 372 (522)
Q Consensus 305 ~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~----~v~~~-----dG~~~~~D~ 372 (522)
+.+.+.+.+++.+|+++.+. +.+++. + .|.++ +|+++++|.
T Consensus 226 ---------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 226 ---------------------------VAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp ---------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred ---------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 01111233446678888775 777764 2 25565 456799999
Q ss_pred EEEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 373 VLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 373 VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
||+|||++++.... ++ ...++..++++.+.+...+. ++.||||++|++.... ..+.|..||+.+|..+.|.
T Consensus 279 vv~a~G~~p~~~~l-~l--~~~g~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 279 LLVAVGRRPYIAGL-GA--EKIGLEVDKRGRLVIDDQFN-SKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp EEECSCEEECCTTS-CT--TTTTCCBCTTSCBCCCTTSB-CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEECCCCCcCCCCC-Cc--hhcCceeCCCCCEeECcCCc-cCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 99999999985310 01 11122223355566666544 7899999999887643 3578999999999999875
No 64
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.94 E-value=4.1e-27 Score=245.28 Aligned_cols=304 Identities=16% Similarity=0.158 Sum_probs=184.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCC-CcccCCCCC----CCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRC-DFEFSDYPW----PERDDASFPS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~ 82 (522)
.+||+|||||++|+++|..| .|++|+|||++ .+||+|.+. ++|...+..... .+.....|+ +.. .....
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~--~~~~~ 80 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT--VPTID 80 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC--CCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC--CCccC
Confidence 56999999999999999999 89999999998 799998742 222221100000 000111111 111 11122
Q ss_pred hHHHH-------HHHH-----HHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe
Q 041145 83 HVELL-------DYLH-----GYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA 149 (522)
Q Consensus 83 ~~~~~-------~yl~-----~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 149 (522)
..++. .+++ ...++. ++ .+..+ ++..++ ...+.|.+.+++
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~~~~~~-----------------------~~~~~v~~~~g~- 133 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAI--TVVHG-EARFKD-----------------------DQSLTVRLNEGG- 133 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEEE-EEEEEE-----------------------TTEEEEEETTSS-
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEEE-EEEEcc-----------------------CCEEEEEeCCCc-
Confidence 23322 2332 112222 32 22222 344333 223445443331
Q ss_pred eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHh
Q 041145 150 IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEA 229 (522)
Q Consensus 150 ~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~ 229 (522)
.+++.||+||+|||. .|+.|++| |++.. .++++.+.... ...+|+|+|||+|.+|+|+|..+++.
T Consensus 134 ~~~~~~d~lviAtGs---~p~~p~i~---G~~~~--~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~~ 198 (467)
T 1zk7_A 134 ERVVMFDRCLVATGA---SPAVPPIP---GLKES--PYWTSTEALAS-------DTIPERLAVIGSSVVALELAQAFARL 198 (467)
T ss_dssp EEEEECSEEEECCCE---EECCCCCT---TTTTS--CCBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred eEEEEeCEEEEeCCC---CCCCCCCC---CCCcC--ceecHHHHhcc-------cccCCEEEEECCCHHHHHHHHHHHHc
Confidence 247999999999994 58889899 87643 23444443321 23579999999999999999999998
Q ss_pred cCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCc
Q 041145 230 NQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPL 309 (522)
Q Consensus 230 ~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (522)
+. +||++.|.+.+ +| .+ ..
T Consensus 199 g~-----~Vtlv~~~~~~-l~-~~---------------------------------------~~--------------- 217 (467)
T 1zk7_A 199 GS-----KVTVLARNTLF-FR-ED---------------------------------------PA--------------- 217 (467)
T ss_dssp TC-----EEEEECSSCTT-TT-SC---------------------------------------HH---------------
T ss_pred CC-----EEEEEEECCcc-CC-CC---------------------------------------HH---------------
Confidence 65 59999998752 22 11 00
Q ss_pred ccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecCCceeeccEEEEeccCCCCcc
Q 041145 310 VKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFEDKSKLEADVVLLATGYDGKKK 384 (522)
Q Consensus 310 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~ATG~~~~~~ 384 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ |.++ +.++++|.||+|||++++..
T Consensus 218 ----------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 218 ----------------------IGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp ----------------------HHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred ----------------------HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 01112233445678888775 77775422 4444 56799999999999999853
Q ss_pred ccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 385 LQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 385 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
+. .....++..+..+.+.+...+ .++.||||++|++.... ..+.|..|++.+|..+.|.
T Consensus 275 ~l---~l~~~gl~~~~~G~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 275 SL---ALDAAGVTVNAQGAIVIDQGM-RTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp TS---CGGGGTCCBCTTSCBCCCTTC-BCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cC---CchhcCCcCCCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 21 111112222334556666554 46899999999876543 3678999999999988765
No 65
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.94 E-value=3e-27 Score=247.20 Aligned_cols=300 Identities=15% Similarity=0.085 Sum_probs=187.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCC----CCcccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPR----CDFEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||+ +.+||+|.+. ++|...+..+. ....+..+.+.... .....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~--~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYAD--PIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCC--CEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCC--CccCH
Confidence 46999999999999999999 8999999999 6899998641 33332211100 00111122221111 11222
Q ss_pred HHHH-----------HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE-eCCeeE
Q 041145 84 VELL-----------DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE-TNQAIQ 151 (522)
Q Consensus 84 ~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~ 151 (522)
..+. .++....++.++ .+..+ ++..++. +.+.+. ++ .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~-------------------------~~v~v~~~~---~ 151 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNV--HIYES-RAVFVDE-------------------------HTLELSVTG---E 151 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET-------------------------TEEEETTTC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEeeC-------------------------CEEEEecCC---e
Confidence 2222 233333444444 22222 3333321 145554 33 3
Q ss_pred EEEECEEEEeeeccCCCCC-CCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhc
Q 041145 152 WYGFELLVMCIGKFGDIPR-MPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEAN 230 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~-~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~ 230 (522)
.+.||+||+|||. .|. .|++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..+++.+
T Consensus 152 ~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~~~g 214 (484)
T 3o0h_A 152 RISAEKILIATGA---KIVSNSAIK---GSDL----CLTSNEIFDL-------EKLPKSIVIVGGGYIGVEFANIFHGLG 214 (484)
T ss_dssp EEEEEEEEECCCE---EECCC--CB---TGGG----SBCTTTGGGC-------SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEeCEEEEccCC---CcccCCCCC---Cccc----cccHHHHHhH-------HhcCCcEEEECcCHHHHHHHHHHHHcC
Confidence 7999999999995 477 88888 8753 3344444332 235799999999999999999999886
Q ss_pred CCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcc
Q 041145 231 QGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLV 310 (522)
Q Consensus 231 ~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (522)
. +|+++.|.+.++ +..+ ..
T Consensus 215 ~-----~Vtli~~~~~~l-~~~~---------------------------------------~~---------------- 233 (484)
T 3o0h_A 215 V-----KTTLLHRGDLIL-RNFD---------------------------------------YD---------------- 233 (484)
T ss_dssp C-----EEEEECSSSSSS-TTSC---------------------------------------HH----------------
T ss_pred C-----eEEEEECCCccc-cccC---------------------------------------HH----------------
Confidence 5 599999887522 2111 00
Q ss_pred cCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCceeeccEEEEeccCCCCccc
Q 041145 311 KFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKL 385 (522)
Q Consensus 311 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l 385 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ .|+++||+++++|.||+|||++++..+
T Consensus 234 ---------------------~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 234 ---------------------LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp ---------------------HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred ---------------------HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 11112233446678888865 7777654 378889989999999999999998532
Q ss_pred cccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcCC
Q 041145 386 QSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g~ 447 (522)
. .....++..++.+.+.+...+ .++.||||++|++.+. ...+.|..||+.+|+.+.|.
T Consensus 293 l---~l~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 293 L---GLERAGVKVNEFGAVVVDEKM-TTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp C---CHHHHTCCBCTTSCBCCCTTS-BCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred C---ChhhcCceECCCCCEeECCCC-CCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 1 111112222344556565554 4789999999988763 34578999999999999875
No 66
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=6e-27 Score=243.13 Aligned_cols=298 Identities=17% Similarity=0.179 Sum_probs=187.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCc----ccCC---CCCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDF----EFSD---YPWPERDDASF 80 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~ 80 (522)
.+||+|||||++|+++|..| .|++|+|||+ +.+||+|.+. +.|+..+......+ .+.. +.++.. ...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~--~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA--SPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC--CCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC--CCc
Confidence 46999999999999999999 7999999999 6899998741 23332111000000 1111 222211 122
Q ss_pred CChHHHHHH-----------HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe
Q 041145 81 PSHVELLDY-----------LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA 149 (522)
Q Consensus 81 ~~~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 149 (522)
.+..++..+ +..+.++.++ .+..++.+. ++. ++|++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~~-~~~-------------------------~~v~v~~--- 130 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAKV-LDG-------------------------KQVEVDG--- 130 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEEE-EET-------------------------TEEEETT---
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEEE-ccC-------------------------CEEEEee---
Confidence 334444433 2344555565 455554432 211 2455543
Q ss_pred eEEEEECEEEEeeeccCCCCCCCC-CCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHH
Q 041145 150 IQWYGFELLVMCIGKFGDIPRMPA-FPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAE 228 (522)
Q Consensus 150 ~~~~~~d~vViAtG~~s~~p~~p~-~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~ 228 (522)
.++.||+||+|||.. |+.|+ +| . .+.++++.++.... ..+|+|+|||+|.+|+|+|..|++
T Consensus 131 -~~~~~d~lviATGs~---p~~~~~~~---~----~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~~ 192 (458)
T 1lvl_A 131 -QRIQCEHLLLATGSS---SVELPMLP---L----GGPVISSTEALAPK-------ALPQHLVVVGGGYIGLELGIAYRK 192 (458)
T ss_dssp -EEEECSEEEECCCEE---ECCBTTBC---C----BTTEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHHHHH
T ss_pred -EEEEeCEEEEeCCCC---CCCCCCCC---c----cCcEecHHHHhhhh-------ccCCeEEEECcCHHHHHHHHHHHH
Confidence 379999999999954 76665 43 2 23567776665431 257999999999999999999999
Q ss_pred hcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCC
Q 041145 229 ANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLP 308 (522)
Q Consensus 229 ~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
.+. +||++.|.+.. +|..+ ..+
T Consensus 193 ~g~-----~Vtlv~~~~~~-l~~~~---------------------------------------~~~------------- 214 (458)
T 1lvl_A 193 LGA-----QVSVVEARERI-LPTYD---------------------------------------SEL------------- 214 (458)
T ss_dssp HTC-----EEEEECSSSSS-STTSC---------------------------------------HHH-------------
T ss_pred CCC-----eEEEEEcCCcc-ccccC---------------------------------------HHH-------------
Confidence 865 59999998752 22211 000
Q ss_pred cccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEec--CC--ceeeccEEEEeccCCCCc
Q 041145 309 LVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFE--DK--SKLEADVVLLATGYDGKK 383 (522)
Q Consensus 309 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~--dG--~~~~~D~VI~ATG~~~~~ 383 (522)
.+.+.+.+++.+|+++.+. +.+++.+++.+. +| +++++|.||+|||++++.
T Consensus 215 ------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 215 ------------------------TAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ------------------------HHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ------------------------HHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 0111223445577787775 777775335554 67 579999999999999985
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCC
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQK 447 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~ 447 (522)
.+. .....++..++. .+.+...+ .++.||||++|++.... ..+.|..||+.+|..+.|.
T Consensus 271 ~~l---~~~~~g~~~~~~-~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 271 KGF---NLECLDLKMNGA-AIAIDERC-QTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp SSS---SGGGSCCCEETT-EECCCTTC-BCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCC---CcHhcCCcccCC-EEeECCCC-cCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 321 111111211223 45566554 47899999999876543 3578999999999999875
No 67
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.94 E-value=1.3e-26 Score=240.40 Aligned_cols=294 Identities=16% Similarity=0.175 Sum_probs=190.1
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
||+|||||++|+++|..| . |.+|+|||+++.++.... ..+.. + ..... . ....++..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~--~~~~~-~---~g~~~--~-----------~~~~~~~~ 62 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC--GIALY-L---GKEIK--N-----------NDPRGLFY 62 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG--GHHHH-H---TTCBG--G-----------GCGGGGBS
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc--cchhh-h---cCCcc--c-----------CCHHHhhh
Confidence 899999999999999999 4 999999999876542110 00000 0 00000 0 00011111
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC--CeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN--QAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~d~vViAtG~~s 166 (522)
++...++++++ .++++++|+.++. + .+ .|.+.+. +...++.||+||+|||.
T Consensus 63 ~~~~~~~~~gv--~~~~~~~v~~i~~--~-------------------~~--~v~v~~~~~g~~~~~~~d~lviAtGs-- 115 (452)
T 2cdu_A 63 SSPEELSNLGA--NVQMRHQVTNVDP--E-------------------TK--TIKVKDLITNEEKTEAYDKLIMTTGS-- 115 (452)
T ss_dssp CCHHHHHHTTC--EEEESEEEEEEEG--G-------------------GT--EEEEEETTTCCEEEEECSEEEECCCE--
T ss_pred cCHHHHHHcCC--EEEeCCEEEEEEc--C-------------------CC--EEEEEecCCCceEEEECCEEEEccCC--
Confidence 12233455676 6778899998876 2 12 3555441 11347999999999994
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+.|++| |.+. ..++++..+.+..... .....+|+|+|||+|.+|+|+|..+++.+. +||++.|.+.
T Consensus 116 -~p~~p~i~---g~~~--~~v~~~~~~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~-----~Vtlv~~~~~ 183 (452)
T 2cdu_A 116 -KPTVPPIP---GIDS--SRVYLCKNYNDAKKLF-EEAPKAKTITIIGSGYIGAELAEAYSNQNY-----NVNLIDGHER 183 (452)
T ss_dssp -EECCCCCT---TTTS--TTEEECSSHHHHHHHH-HHGGGCSEEEEECCSHHHHHHHHHHHTTTC-----EEEEEESSSS
T ss_pred -CcCCCCCC---CCCC--CCEEEeCcHHHHHHHH-HHhccCCeEEEECcCHHHHHHHHHHHhcCC-----EEEEEEcCCc
Confidence 58888888 8753 2366665554321110 112368999999999999999999998754 5999999875
Q ss_pred eeecC-CCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 247 WTLPS-YRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 247 ~~~p~-~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
. +|+ .+ ..
T Consensus 184 ~-l~~~~~---------------------------------------~~------------------------------- 192 (452)
T 2cdu_A 184 V-LYKYFD---------------------------------------KE------------------------------- 192 (452)
T ss_dssp T-TTTTSC---------------------------------------HH-------------------------------
T ss_pred h-hhhhhh---------------------------------------hh-------------------------------
Confidence 2 121 10 00
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEec-Cc-E--EecCCceeeccEEEEeccCCCCccccccCCCcccccccCc
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWS-GG-I--EFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADS 400 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~-~~-v--~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~ 400 (522)
+.+.+.+.+++.+|+++.+. +.+++. ++ + ...||+++++|.||+|||++++..+. . .. +..++
T Consensus 193 ------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll---~-~~--l~~~~ 260 (452)
T 2cdu_A 193 ------FTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELL---K-GK--VAMLD 260 (452)
T ss_dssp ------HHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGG---T-TT--SCBCT
T ss_pred ------HHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHH---H-Hh--hhcCC
Confidence 11112234556778888876 777765 33 3 33488889999999999999996432 1 11 22234
Q ss_pred ccccccccccccCCCCceeEeeccccc-----------chhhHHHHHHHHHHHHhcCCC
Q 041145 401 SGIMPLYRGTIHPLIPNMAFVGYIETV-----------SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 401 ~~~~~l~~~~~~~~~pni~~vG~~~~~-----------~~~~~ae~qa~~~a~~l~g~~ 448 (522)
++.+.+..++ .++.||||++|++... ...+.|..||+.+|+.+.|..
T Consensus 261 ~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 261 NGAIITDEYM-HSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp TSCBCCCTTS-BCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred CCCEEECCCc-CcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 5556666654 4689999999977652 236789999999999998763
No 68
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.94 E-value=5.2e-26 Score=237.93 Aligned_cols=305 Identities=14% Similarity=0.145 Sum_probs=191.9
Q ss_pred CCcEEEECCCHHHHHHHHHh-C--CCCcEEEc--------cCCCCCcccCCC-ccCcccccCCCCCc----ccCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL-R--HYDPLVFE--------ATNSIGGVWKHC-SFNSTKLQTPRCDF----EFSDYPWPE 74 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~--g~~v~v~e--------~~~~~GG~w~~~-~~~~~~~~~~~~~~----~~~~~~~~~ 74 (522)
.+||+|||||++|+++|..| . |++|+||| +...+||+|.+. ++|+..+......+ ....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 46999999999999999999 5 99999999 356799998642 33432211110000 111111111
Q ss_pred CCCC-CCCChHHHHHHH-----------HHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE
Q 041145 75 RDDA-SFPSHVELLDYL-----------HGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE 141 (522)
Q Consensus 75 ~~~~-~~~~~~~~~~yl-----------~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (522)
.. . ......++.++. ....++. ++ .+..+ +++.++. . .
T Consensus 83 ~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~-----------------------~--~ 133 (490)
T 1fec_A 83 DR-ESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQG-FGALQDN-----------------------H--T 133 (490)
T ss_dssp CG-GGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEES-EEEEEET-----------------------T--E
T ss_pred CC-cccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEe-EEEEeeC-----------------------C--E
Confidence 00 0 012233333332 2233344 44 33333 3444432 1 3
Q ss_pred EEEEe---CCe--eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCC
Q 041145 142 VAVET---NQA--IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYR 216 (522)
Q Consensus 142 v~~~~---~~~--~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G 216 (522)
+.+.+ .++ ..++.||+||+|||. .|..|++| |.+. ++++.++..+ ...+++|+|||+|
T Consensus 134 v~v~~~~~~~g~~~~~~~~d~lviAtGs---~p~~p~i~---g~~~----~~~~~~~~~~-------~~~~~~vvViGgG 196 (490)
T 1fec_A 134 VLVRESADPNSAVLETLDTEYILLATGS---WPQHLGIE---GDDL----CITSNEAFYL-------DEAPKRALCVGGG 196 (490)
T ss_dssp EEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCSB---TGGG----CBCHHHHTTC-------SSCCSEEEEECSS
T ss_pred EEEEeeccCCCCceEEEEcCEEEEeCCC---CCCCCCCC---Cccc----eecHHHHhhh-------hhcCCeEEEECCC
Confidence 55542 112 147999999999994 48888888 8742 3455544432 1347899999999
Q ss_pred CCHHHHHHHHHHh---cCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHH
Q 041145 217 KSAIDLAVECAEA---NQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRK 293 (522)
Q Consensus 217 ~sg~dia~~l~~~---~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (522)
.+|+|+|..+++. +. +||++.|.+. ++|..+ .
T Consensus 197 ~ig~E~A~~l~~~~~~g~-----~Vtlv~~~~~-~l~~~d---------------------------------------~ 231 (490)
T 1fec_A 197 YISIEFAGIFNAYKARGG-----QVDLAYRGDM-ILRGFD---------------------------------------S 231 (490)
T ss_dssp HHHHHHHHHHHHHSCTTC-----EEEEEESSSS-SSTTSC---------------------------------------H
T ss_pred HHHHHHHHHHHhhccCcC-----eEEEEEcCCC-cccccC---------------------------------------H
Confidence 9999999999998 64 5999999875 222211 0
Q ss_pred HHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEEecCCce
Q 041145 294 AISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFEDKSK 367 (522)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~dG~~ 367 (522)
. +.+.+.+.+++.+|+++.+. +.+++.+ .|+++||++
T Consensus 232 ~-------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 274 (490)
T 1fec_A 232 E-------------------------------------LRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAE 274 (490)
T ss_dssp H-------------------------------------HHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCE
T ss_pred H-------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcE
Confidence 0 01112234556789998886 7777643 377889988
Q ss_pred eeccEEEEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-chhhHHHHHHHHHHHHhcC
Q 041145 368 LEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-SNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 368 ~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-~~~~~ae~qa~~~a~~l~g 446 (522)
+++|.||+|||++++... +.....++..++++.+.+...+ .++.||||++|++.+. ...+.|..|++.+|..+.|
T Consensus 275 i~~D~vv~a~G~~p~~~~---L~l~~~gl~~~~~G~I~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 275 ADYDVVMLAIGRVPRSQT---LQLEKAGVEVAKNGAIKVDAYS-KTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp EEESEEEECSCEEESCTT---SCGGGGTCCBCTTSCBCCCTTC-BCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred EEcCEEEEccCCCcCccc---cCchhcCccCCCCCCEEECCCC-ccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 999999999999998531 1011112222345556666654 4689999999988763 3468899999999999987
Q ss_pred C
Q 041145 447 K 447 (522)
Q Consensus 447 ~ 447 (522)
.
T Consensus 351 ~ 351 (490)
T 1fec_A 351 N 351 (490)
T ss_dssp S
T ss_pred C
Confidence 4
No 69
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.94 E-value=9.6e-27 Score=241.63 Aligned_cols=304 Identities=15% Similarity=0.106 Sum_probs=188.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcc---cCCCCCCCCCCCCCCChHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFE---FSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 85 (522)
+||+|||||++|+++|..| .|++|+|||+++.+||+|.+. +.|+..+......+. ...+.++.. ....+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK--GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC--CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC--CCccCHHH
Confidence 4899999999999999999 899999999998999998642 233221110000000 011111100 01112233
Q ss_pred HHHH-----------HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEE
Q 041145 86 LLDY-----------LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYG 154 (522)
Q Consensus 86 ~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 154 (522)
+..+ +...+++.++ .+..++.+ .+ + ...+.|.+ ++ .++.
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i----~-------------------~~~~~v~~-~g---~~~~ 129 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTAR-FL----S-------------------ERKVLVEE-TG---EELE 129 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEE-ES----S-------------------SSEEEETT-TC---CEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEE-Ee----c-------------------CCeEEEee-CC---EEEE
Confidence 3222 2334444555 34444432 11 1 22333432 23 3789
Q ss_pred ECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCC
Q 041145 155 FELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPN 234 (522)
Q Consensus 155 ~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~ 234 (522)
||+||+|||. .|..|+++ |.+. ..++++.++.... ..+|+|+|||+|.+|+|+|..+++.+.
T Consensus 130 ~d~lviAtG~---~p~~~~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~g~--- 191 (455)
T 2yqu_A 130 ARYILIATGS---APLIPPWA---QVDY--ERVVTSTEALSFP-------EVPKRLIVVGGGVIGLELGVVWHRLGA--- 191 (455)
T ss_dssp EEEEEECCCE---EECCCTTB---CCCS--SSEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHHHHHTTC---
T ss_pred ecEEEECCCC---CCCCCCCC---CCCc--CcEechHHhhccc-------cCCCeEEEECCCHHHHHHHHHHHHcCC---
Confidence 9999999995 47888888 7543 1366766655421 246999999999999999999998864
Q ss_pred CCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCC
Q 041145 235 GQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGL 314 (522)
Q Consensus 235 ~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (522)
+||++.+.+.+ +|..+ ..
T Consensus 192 --~V~lv~~~~~~-l~~~~---------------------------------------~~-------------------- 209 (455)
T 2yqu_A 192 --EVIVLEYMDRI-LPTMD---------------------------------------LE-------------------- 209 (455)
T ss_dssp --EEEEECSSSSS-CTTSC---------------------------------------HH--------------------
T ss_pred --EEEEEecCCcc-ccccC---------------------------------------HH--------------------
Confidence 59999998752 22211 00
Q ss_pred CCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--c--EEecCCceeeccEEEEeccCCCCccccccC
Q 041145 315 KPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--G--IEFEDKSKLEADVVLLATGYDGKKKLQSIL 389 (522)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~--v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~ 389 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ + +.++||+++++|.||+|||++++..+.
T Consensus 210 -----------------~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l--- 269 (455)
T 2yqu_A 210 -----------------VSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGL--- 269 (455)
T ss_dssp -----------------HHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTC---
T ss_pred -----------------HHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCC---
Confidence 01111223345567888775 7777642 3 455688889999999999999985321
Q ss_pred CCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCCC
Q 041145 390 PKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~~ 448 (522)
.....++..+..+.+.+...+ .++.||||++|+..... ..+.|..||+.+|..+.|..
T Consensus 270 ~~~~~g~~~~~~g~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 328 (455)
T 2yqu_A 270 SLENAGLSTDERGRIPVDEHL-RTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGF 328 (455)
T ss_dssp CGGGGTCCCCTTSCCCCCTTS-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred ChhhcCCccCCCCcEeECCCc-ccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCCC
Confidence 111111222234445565554 47889999999876543 35789999999999998753
No 70
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.94 E-value=1.9e-26 Score=239.81 Aligned_cols=300 Identities=13% Similarity=0.084 Sum_probs=189.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCC----CCCcccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTP----RCDFEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||+ +.+||+|.+. +.|...+..+ .....+..+.+... ......
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVG--ESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEEC--CCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCCcCH
Confidence 46999999999999999999 8999999999 7899998641 2222211000 00011111211110 111222
Q ss_pred HHHHH-----------HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE-eCCeeE
Q 041145 84 VELLD-----------YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE-TNQAIQ 151 (522)
Q Consensus 84 ~~~~~-----------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~ 151 (522)
.++.. ++..+.++.++ .+..+ ++..+ + .+.|.+. ++ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i----~---------------------~~~v~~~~~~---~ 130 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELA----G---------------------PNTVKLLASG---K 130 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEES----S---------------------SSEEEETTTT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEe----e---------------------CCEEEEecCC---e
Confidence 32222 23333344443 22222 22221 1 1245552 22 3
Q ss_pred EEEECEEEEeeeccCCCCC-CCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhc
Q 041145 152 WYGFELLVMCIGKFGDIPR-MPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEAN 230 (522)
Q Consensus 152 ~~~~d~vViAtG~~s~~p~-~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~ 230 (522)
++.||+||+|||. .|. .|++| |.+. ++++.++... ...+|+|+|||+|.+|+|+|..+++.+
T Consensus 131 ~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~~~g 193 (463)
T 4dna_A 131 TVTAERIVIAVGG---HPSPHDALP---GHEL----CITSNEAFDL-------PALPESILIAGGGYIAVEFANIFHGLG 193 (463)
T ss_dssp EEEEEEEEECCCE---EECCCTTST---TGGG----CBCHHHHTTC-------SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEeCEEEEecCC---CcccCCCCC---Cccc----cccHHHHhhh-------hcCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 7899999999994 478 88888 8763 3444444432 135799999999999999999999986
Q ss_pred CCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcc
Q 041145 231 QGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLV 310 (522)
Q Consensus 231 ~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (522)
. +|+++.|.+..+ |..+ ..
T Consensus 194 ~-----~Vt~v~~~~~~l-~~~~---------------------------------------~~---------------- 212 (463)
T 4dna_A 194 V-----KTTLIYRGKEIL-SRFD---------------------------------------QD---------------- 212 (463)
T ss_dssp C-----EEEEECSSSSSS-TTSC---------------------------------------HH----------------
T ss_pred C-----eEEEEEcCCccc-cccC---------------------------------------HH----------------
Confidence 5 599999987532 2211 00
Q ss_pred cCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC-----cEE-ecCCceeeccEEEEeccCCCCc
Q 041145 311 KFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG-----GIE-FEDKSKLEADVVLLATGYDGKK 383 (522)
Q Consensus 311 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~-~~dG~~~~~D~VI~ATG~~~~~ 383 (522)
+.+.+.+.+++.+|+++.+. +.+++.+ .|. ++||+ +++|.||+|||++++.
T Consensus 213 ---------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 213 ---------------------MRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp ---------------------HHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred ---------------------HHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 11122234556788888876 7777653 367 78888 9999999999999985
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeecccccc-hhhHHHHHHHHHHHHhcCCC
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-~~~~ae~qa~~~a~~l~g~~ 448 (522)
.+. .....++..++++.+.+...+. ++.||||++|++.+.. ..+.|..|++.+|+.+.|..
T Consensus 271 ~~l---~l~~~g~~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 332 (463)
T 4dna_A 271 NGL---GLEAAGVRTNELGAIIVDAFSR-TSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNN 332 (463)
T ss_dssp TTS---STGGGTCCBCTTSCBCCCTTCB-CSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred CCC---CccccCceECCCCCEeECcCCC-CCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCC
Confidence 321 1111122223456566666644 8899999999877643 35789999999999998753
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.94 E-value=1.8e-27 Score=249.05 Aligned_cols=307 Identities=13% Similarity=0.087 Sum_probs=189.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCC----cccCCCCCCCCCCCCCCCh
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCD----FEFSDYPWPERDDASFPSH 83 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 83 (522)
.+||+|||||++|+++|..| .|++|+|||++. +||+|.+. +.|+..+...... ..+..+.++.. ....+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD--RISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS--EEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC--CCccCH
Confidence 36999999999999999999 899999999974 99988541 3343322111000 01122222111 122456
Q ss_pred HHHHHHHHHHHHhcCCc--CceEe--ceEEEE--EEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECE
Q 041145 84 VELLDYLHGYAVHFDVL--KYIKF--NSKVVE--IRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFEL 157 (522)
Q Consensus 84 ~~~~~yl~~~~~~~~l~--~~i~~--~~~V~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~ 157 (522)
.++.+++..+.+++... ..+.. ...+.. ... .+.++|++.++ .++.||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~----------------------~~~~~v~~~~~---~~~~~d~ 139 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKF----------------------LDEHTLQVDDH---SQVIAKR 139 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEE----------------------EETTEEEETTT---EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEE----------------------ecCCEEEEcCC---cEEEeCE
Confidence 67777766655544210 00000 000100 000 11235666444 3799999
Q ss_pred EEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 041145 158 LVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQP 237 (522)
Q Consensus 158 vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~ 237 (522)
||+||| +.|..|+++ |.. ...++++.++... ...+|+|+|||+|.+|+|+|..+++.+. +
T Consensus 140 lViATG---s~p~~p~~~---~~~--~~~v~t~~~~~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~-----~ 199 (492)
T 3ic9_A 140 IVIATG---SRPNYPEFL---AAA--GSRLLTNDNLFEL-------NDLPKSVAVFGPGVIGLELGQALSRLGV-----I 199 (492)
T ss_dssp EEECCC---EECCCCHHH---HTT--GGGEECHHHHTTC-------SSCCSEEEEESSCHHHHHHHHHHHHTTC-----E
T ss_pred EEEccC---CCCcCCCCC---Ccc--CCcEEcHHHHhhh-------hhcCCeEEEECCCHHHHHHHHHHHHcCC-----e
Confidence 999999 458888766 432 2346666655542 2357999999999999999999999865 5
Q ss_pred EEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCC
Q 041145 238 CTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPD 317 (522)
Q Consensus 238 Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 317 (522)
||++.|.+.. +|..+ ..+..
T Consensus 200 Vtlv~~~~~~-l~~~d---------------------------------------~~~~~-------------------- 219 (492)
T 3ic9_A 200 VKVFGRSGSV-ANLQD---------------------------------------EEMKR-------------------- 219 (492)
T ss_dssp EEEECCTTCC-TTCCC---------------------------------------HHHHH--------------------
T ss_pred EEEEEECCcc-cccCC---------------------------------------HHHHH--------------------
Confidence 9999998863 22211 00111
Q ss_pred CccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--c--EEec--CC--ceeeccEEEEeccCCCCcccccc
Q 041145 318 HPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--G--IEFE--DK--SKLEADVVLLATGYDGKKKLQSI 388 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~--v~~~--dG--~~~~~D~VI~ATG~~~~~~l~~~ 388 (522)
.+.+.+++. |+++.+. +.+++.+ + +.+. || +++++|.||+|||++|+..+.
T Consensus 220 -----------------~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l-- 279 (492)
T 3ic9_A 220 -----------------YAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKL-- 279 (492)
T ss_dssp -----------------HHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSS--
T ss_pred -----------------HHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCC--
Confidence 111233345 7777766 6666543 3 4554 77 569999999999999985331
Q ss_pred CCCcccccccCcccccccccccccCCCCceeEeecccccch-hhHHHHHHHHHHHHhcC
Q 041145 389 LPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVSN-LQIAEIRCKWLARLADQ 446 (522)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~~-~~~ae~qa~~~a~~l~g 446 (522)
.....++..++++.+.+....+.++.||||++|++.+... .+.|..|++.+|..+.+
T Consensus 280 -~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 280 -GLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp -CGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred -ChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 1111122223455555552334468999999998876443 57899999999999876
No 72
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.94 E-value=4.9e-26 Score=235.77 Aligned_cols=293 Identities=16% Similarity=0.156 Sum_probs=188.2
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
||+|||||++|+++|..| . |.+|+|||+++.+|. ..+..+.. ... .+...+++..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~--~~~~~~~~----------~~~---------~~~~~~~~~~ 60 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF--LSAGMQLY----------LEG---------KVKDVNSVRY 60 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB--CGGGHHHH----------HTT---------SSCCGGGSBS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc--ccccchhh----------hcC---------ccCCHHHhhc
Confidence 899999999999999999 4 899999999876641 11011000 000 0001111111
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe-CCe-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET-NQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~d~vViAtG~~s 166 (522)
++....+++++ .+.++++|+.++. + .+ .|++.+ .++ ..++.||+||+|||.
T Consensus 61 ~~~~~~~~~gv--~~~~~~~v~~i~~--~-------------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~-- 113 (447)
T 1nhp_A 61 MTGEKMESRGV--NVFSNTEITAIQP--K-------------------EH--QVTVKDLVSGEERVENYDKLIISPGA-- 113 (447)
T ss_dssp CCHHHHHHTTC--EEEETEEEEEEET--T-------------------TT--EEEEEETTTCCEEEEECSEEEECCCE--
T ss_pred CCHHHHHHCCC--EEEECCEEEEEeC--C-------------------CC--EEEEEecCCCceEEEeCCEEEEcCCC--
Confidence 22333455676 6778999998876 3 12 466654 111 235899999999994
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhh-hhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAA-TELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~-~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|..|++| |.+. . .++|+..+.+...... .....+++|+|||+|.+|+|+|..+++.+. +|+++.|.+
T Consensus 114 -~p~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~ 182 (447)
T 1nhp_A 114 -VPFELDIP---GKDL-D-NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-----KVTVIDILD 182 (447)
T ss_dssp -EECCCCST---TTTS-B-SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSS
T ss_pred -CcCCCCCC---CCCC-C-CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCC-----eEEEEecCc
Confidence 48888899 8752 2 3666555443211000 011268999999999999999999998864 599999887
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYA 325 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 325 (522)
.. +++.. ...
T Consensus 183 ~~-l~~~~--------------------------------------~~~------------------------------- 192 (447)
T 1nhp_A 183 RP-LGVYL--------------------------------------DKE------------------------------- 192 (447)
T ss_dssp ST-TTTTC--------------------------------------CHH-------------------------------
T ss_pred cc-ccccC--------------------------------------CHH-------------------------------
Confidence 52 11100 000
Q ss_pred cccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecCCceeeccEEEEeccCCCCccccccCCCcccccccCc
Q 041145 326 SCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADS 400 (522)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~ 400 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ +.+ +|+++++|.||+|||++++..+. .. . +..+.
T Consensus 193 ------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~---~~-~--~~~~~ 259 (447)
T 1nhp_A 193 ------FTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWL---KG-T--LELHP 259 (447)
T ss_dssp ------HHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGGG---TT-T--SCBCT
T ss_pred ------HHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHHH---Hh-h--hhhcC
Confidence 11122234556789998876 77887543 444 67789999999999999985432 11 1 11223
Q ss_pred ccccccccccccCCCCceeEeeccccc-----------chhhHHHHHHHHHHHHhcCCC
Q 041145 401 SGIMPLYRGTIHPLIPNMAFVGYIETV-----------SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 401 ~~~~~l~~~~~~~~~pni~~vG~~~~~-----------~~~~~ae~qa~~~a~~l~g~~ 448 (522)
++.+.+...+ .++.||||++|++... ...+.|..||+.+|..+.|..
T Consensus 260 ~G~i~Vd~~~-~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 317 (447)
T 1nhp_A 260 NGLIKTDEYM-RTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV 317 (447)
T ss_dssp TSCBCCCTTC-BCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred CCcEEECccc-cCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC
Confidence 4556666554 4689999999977642 235789999999999998853
No 73
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.94 E-value=1.9e-26 Score=240.94 Aligned_cols=308 Identities=14% Similarity=0.069 Sum_probs=188.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC------CCCcccCCC-ccCcccccCCCCCc-----ccCCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN------SIGGVWKHC-SFNSTKLQTPRCDF-----EFSDYPWPERD 76 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~------~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~ 76 (522)
.+||+|||||++|+++|..| .|++|+|||+++ .+||+|.+. +.|...+......+ .+..+.+...
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~- 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG- 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS-
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC-
Confidence 57999999999999999999 899999999987 366666431 22322111000000 0111111110
Q ss_pred CCCCCChHHHHHHHHHH-----------HHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE
Q 041145 77 DASFPSHVELLDYLHGY-----------AVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE 145 (522)
Q Consensus 77 ~~~~~~~~~~~~yl~~~-----------~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (522)
........+..+.+.+ .++.++ .+..++ +..+ + ...+.|...
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~----~-------------------~~~~~v~~~ 134 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFEGH-GKLL----A-------------------GKKVEVTAA 134 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESE-EEEC----S-------------------TTCEEEECT
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEe----c-------------------CCEEEEEcC
Confidence 1122333333333332 333343 222222 2111 1 234555432
Q ss_pred eCCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHH
Q 041145 146 TNQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVE 225 (522)
Q Consensus 146 ~~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~ 225 (522)
+++ .+++.||+||+|||. .|..|+.+ +.+ ...++++.++... ...+|+|+|||+|.+|+|+|..
T Consensus 135 ~g~-~~~~~~d~lvlAtG~---~p~~~~~~---~~~--~~~v~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~ 198 (476)
T 3lad_A 135 DGS-SQVLDTENVILASGS---KPVEIPPA---PVD--QDVIVDSTGALDF-------QNVPGKLGVIGAGVIGLELGSV 198 (476)
T ss_dssp TSC-EEEECCSCEEECCCE---EECCCTTS---CCC--SSSEEEHHHHTSC-------SSCCSEEEEECCSHHHHHHHHH
T ss_pred CCc-eEEEEcCEEEEcCCC---CCCCCCCC---CCC--cccEEechhhhcc-------ccCCCeEEEECCCHHHHHHHHH
Confidence 221 357899999999995 46666555 432 1346677665542 2457999999999999999999
Q ss_pred HHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhh
Q 041145 226 CAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVW 305 (522)
Q Consensus 226 l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
+++.+. +||++.|.+.. +|..+ ..
T Consensus 199 l~~~g~-----~Vtlv~~~~~~-l~~~~---------------------------------------~~----------- 222 (476)
T 3lad_A 199 WARLGA-----EVTVLEAMDKF-LPAVD---------------------------------------EQ----------- 222 (476)
T ss_dssp HHHTTC-----EEEEEESSSSS-STTSC---------------------------------------HH-----------
T ss_pred HHHcCC-----cEEEEecCCCc-CcccC---------------------------------------HH-----------
Confidence 999865 59999998752 22111 00
Q ss_pred cCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCc----EEecCC---ceeeccEEEEec
Q 041145 306 KLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG----IEFEDK---SKLEADVVLLAT 377 (522)
Q Consensus 306 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~----v~~~dG---~~~~~D~VI~AT 377 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ +.+.++ +++++|.||+||
T Consensus 223 --------------------------~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~ 276 (476)
T 3lad_A 223 --------------------------VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAV 276 (476)
T ss_dssp --------------------------HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECS
T ss_pred --------------------------HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEee
Confidence 11122234557789998886 77776432 666655 568999999999
Q ss_pred cCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhcCCC
Q 041145 378 GYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 378 G~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
|++|+..+ +.....++..++.+.+.+...+ .++.||||++|++.+ +...+.|..|++.+|+.+.|+.
T Consensus 277 G~~p~~~~---l~~~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 277 GRRPVTTD---LLAADSGVTLDERGFIYVDDYC-ATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp CEEECCTT---CCSSCCSCCBCTTSCBCCCTTS-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCcccCCC---CCccccCccccCCCCEeeCCCc-ccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 99998532 1111112222345556666554 478999999998874 3346889999999999998764
No 74
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.94 E-value=9.6e-27 Score=238.39 Aligned_cols=294 Identities=14% Similarity=0.051 Sum_probs=190.8
Q ss_pred cEEEECCCHHHHHHHHHh-C----CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 13 KIGIIGAGISGIATAKQL-R----HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l-~----g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
+|+|||||++|+++|..| . |++|+|||+++.++.... .+. .. .......++.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~---~~~--------------~~------~~~~~~~~~~ 59 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA---LPH--------------VA------IGVRDVDELK 59 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS---SCC--------------CC------SSCCCCCCEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc---hhh--------------cc------cCCcCHHHHH
Confidence 899999999999999999 4 789999999875422110 000 00 1111222334
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeeccC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~s 166 (522)
.++...++++++ .+..+ +|+.++. +. ..|++.++++ .+++.||+||+|||.
T Consensus 60 ~~~~~~~~~~gv--~~~~~-~v~~i~~--~~---------------------~~V~~~~g~~~~~~~~~d~lViAtG~-- 111 (409)
T 3h8l_A 60 VDLSEALPEKGI--QFQEG-TVEKIDA--KS---------------------SMVYYTKPDGSMAEEEYDYVIVGIGA-- 111 (409)
T ss_dssp EEHHHHTGGGTC--EEEEC-EEEEEET--TT---------------------TEEEEECTTSCEEEEECSEEEECCCC--
T ss_pred HHHHHHHhhCCe--EEEEe-eEEEEeC--CC---------------------CEEEEccCCcccceeeCCEEEECCCC--
Confidence 455666667776 45545 8888875 21 2577776543 456999999999994
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCC-------------------C------CHH
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYR-------------------K------SAI 220 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G-------------------~------sg~ 220 (522)
.|+.|.+| |+++ ...|...+.+..... ..... .++++|||+| . .|+
T Consensus 112 -~~~~~~ip---G~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~ 183 (409)
T 3h8l_A 112 -HLATELVK---GWDK---YGYSVCEPEFATKLREKLESF-QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVF 183 (409)
T ss_dssp -EECGGGSB---THHH---HCEESSSTTHHHHHHHHHHHC-CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHH
T ss_pred -CcCccCCC---Chhh---cCcCcCCHHHHHHHHHHHHHh-cCCeEEEEecccccCCCccccccccccCCCCcccCCHHH
Confidence 57888888 8765 233444443311100 00111 2567799999 2 378
Q ss_pred HHHHHHHHhcCCC---CCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHH
Q 041145 221 DLAVECAEANQGP---NGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISK 297 (522)
Q Consensus 221 dia~~l~~~~~~~---~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (522)
|+|..++..-.+. ...+|+++.+.+ ++|... ..
T Consensus 184 e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~---------------------------------------~~--- 219 (409)
T 3h8l_A 184 EMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDLS---------------------------------------PN--- 219 (409)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTBC---------------------------------------HH---
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEeCCc--cccccC---------------------------------------HH---
Confidence 9998776432110 013699998877 333221 00
Q ss_pred HHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecCCceeeccEEEEe
Q 041145 298 FIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFEDKSKLEADVVLLA 376 (522)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~A 376 (522)
+.+.+.+.+++.+|+++.+. |.++++++|+++||+++++|.||+|
T Consensus 220 ----------------------------------~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a 265 (409)
T 3h8l_A 220 ----------------------------------SRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILL 265 (409)
T ss_dssp ----------------------------------HHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEE
T ss_pred ----------------------------------HHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEEC
Confidence 01111233456688999876 8999999999999999999999999
Q ss_pred ccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccc---cchhhHHHHHHHHHHHHhcCCC
Q 041145 377 TGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET---VSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 377 TG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~---~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
||+.++..+.. . ...+ .+.++.+.+...+..+++||||++|+... +.....|+.||+.+|+.|.+.+
T Consensus 266 ~G~~~~~~l~~-~---~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 266 PPYTGNPALKN-S---TPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CCEECCHHHHT-S---CGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHh-c---cccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 99998843221 1 0112 23456677777777779999999998775 3346789999999999886554
No 75
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.94 E-value=6.5e-27 Score=244.60 Aligned_cols=302 Identities=15% Similarity=0.182 Sum_probs=185.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
+++|||||||+||+++|+.| .+++|+|||+++.. .|..+.-..... -.+..++..
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-------~~~PlL~~va~G----------------~l~~~~i~~ 98 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-------LFTPLLPSAPVG----------------TVDEKSIIE 98 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-------ECGGGGGGTTTT----------------SSCGGGGEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-------ccccchhHHhhc----------------cccHHHhhh
Confidence 56899999999999999999 78999999998542 111110000000 011111111
Q ss_pred HHHHHHHhcCCcCceE-eceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-----------------Cee
Q 041145 89 YLHGYAVHFDVLKYIK-FNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-----------------QAI 150 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------------~~~ 150 (522)
.++.+.... ...+. ...+|++|+. +.. +|++++. .+.
T Consensus 99 p~~~~~~~~--~~~v~~~~~~v~~ID~--~~k---------------------~V~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (502)
T 4g6h_A 99 PIVNFALKK--KGNVTYYEAEATSINP--DRN---------------------TVTIKSLSAVSQLYQPENHLGLHQAEP 153 (502)
T ss_dssp EHHHHHTTC--SSCEEEEEEEEEEEEG--GGT---------------------EEEEEEEEEEEECSSSCCCCCCCTTCC
T ss_pred hHHHHHHhh--cCCeEEEEEEEEEEEh--hhC---------------------EEEEeecccceeecccccccccccCCc
Confidence 122222111 11233 3457888876 311 3444321 113
Q ss_pred EEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhh-------------------hhhccCCCeEE
Q 041145 151 QWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-------------------ATELLEGKKVA 211 (522)
Q Consensus 151 ~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-------------------~~~~~~~k~V~ 211 (522)
.++.||+|||||| +.|+.|++| |.+++. ..+++.++.. ..+....++++
T Consensus 154 ~~i~YD~LViAtG---s~~~~~~ip---G~~e~a------~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vv 221 (502)
T 4g6h_A 154 AEIKYDYLISAVG---AEPNTFGIP---GVTDYG------HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIV 221 (502)
T ss_dssp EEEECSEEEECCC---CEECCTTCT---THHHHC------EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEE
T ss_pred eEEeCCEEEEcCC---cccccCCcc---Cccccc------CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceE
Confidence 5799999999999 558888999 876532 1122211100 01112235899
Q ss_pred EECCCCCHHHHHHHHHHhcCC---------CCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHH
Q 041145 212 IIGYRKSAIDLAVECAEANQG---------PNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRT 282 (522)
Q Consensus 212 VIG~G~sg~dia~~l~~~~~~---------~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~ 282 (522)
|||+|++|+|+|.++++.... ....+|+++.+.+. ++|.++
T Consensus 222 VvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~----------------------------- 271 (502)
T 4g6h_A 222 VVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFE----------------------------- 271 (502)
T ss_dssp EECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSC-----------------------------
T ss_pred EECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCC-----------------------------
Confidence 999999999999999875310 00135888888776 233221
Q ss_pred HHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEE
Q 041145 283 FLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIE 361 (522)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~ 361 (522)
.. +++...+.+++.+|+++.+. +.+++++++.
T Consensus 272 ----------~~-------------------------------------~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~ 304 (502)
T 4g6h_A 272 ----------KK-------------------------------------LSSYAQSHLENTSIKVHLRTAVAKVEEKQLL 304 (502)
T ss_dssp ----------HH-------------------------------------HHHHHHHHHHHTTCEEETTEEEEEECSSEEE
T ss_pred ----------HH-------------------------------------HHHHHHHHHHhcceeeecCceEEEEeCCceE
Confidence 01 11122244567789999887 8899988865
Q ss_pred e----cCCc----eeeccEEEEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccc---cchh
Q 041145 362 F----EDKS----KLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET---VSNL 430 (522)
Q Consensus 362 ~----~dG~----~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~---~~~~ 430 (522)
+ .||+ ++++|.||||||.+++.....+. .. .....+..+.+.+...+..+++||||++|++.. +.+.
T Consensus 305 ~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~-~~-~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a 382 (502)
T 4g6h_A 305 AKTKHEDGKITEETIPYGTLIWATGNKARPVITDLF-KK-IPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTA 382 (502)
T ss_dssp EEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHH-HH-SGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCH
T ss_pred EEEEecCcccceeeeccCEEEEccCCcCCHHHHhHH-Hh-ccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCch
Confidence 5 4664 58999999999999883211110 00 112223456677888888889999999998654 2346
Q ss_pred hHHHHHHHHHHHHhcCCCCCC
Q 041145 431 QIAEIRCKWLARLADQKFKLP 451 (522)
Q Consensus 431 ~~ae~qa~~~a~~l~g~~~lp 451 (522)
+.|..||+++|++|.+..+.+
T Consensus 383 ~~A~qqg~~~A~ni~~~~~~~ 403 (502)
T 4g6h_A 383 QVAHQEAEYLAKNFDKMAQIP 403 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHhccc
Confidence 899999999999997665544
No 76
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.93 E-value=4.4e-26 Score=239.03 Aligned_cols=309 Identities=17% Similarity=0.119 Sum_probs=186.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC--------CCCCcccCCC-ccCcccccCCCCCcc-----cCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT--------NSIGGVWKHC-SFNSTKLQTPRCDFE-----FSDYPWPE 74 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~--------~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~ 74 (522)
.+||+|||||++|+.+|.++ .|.+|+|||+. ..+||+|.+. |.|+..+......+. ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 37999999999999999999 89999999974 3489998752 445433221111110 00011100
Q ss_pred CCCCCCCChHHHHHHHHHHHHh-----------cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE
Q 041145 75 RDDASFPSHVELLDYLHGYAVH-----------FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA 143 (522)
Q Consensus 75 ~~~~~~~~~~~~~~yl~~~~~~-----------~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 143 (522)
. ..-.....+.++.+.+.++ .++ . .+.....-+. .....|.
T Consensus 122 ~--~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V--~-~i~G~a~f~~-----------------------~~~v~V~ 173 (542)
T 4b1b_A 122 D--NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV--K-YINGLAKLKD-----------------------KNTVSYY 173 (542)
T ss_dssp E--EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--E-EECEEEEEEE-----------------------TTEEEEE
T ss_pred C--cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC--E-EEeeeEEEcC-----------------------CCcceEe
Confidence 0 1112344444444443332 222 1 1111111111 1222232
Q ss_pred EEeC-CeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHH
Q 041145 144 VETN-QAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDL 222 (522)
Q Consensus 144 ~~~~-~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~di 222 (522)
..+. .+.+++++|++||||| +.|.+|+.+ +... ..+++|.+..++. ..+|+++|||+|.+|+|+
T Consensus 174 ~~~~~~~~~~i~a~~iiIATG---s~P~~P~~~---~~~~--~~~~ts~~~l~l~-------~lP~~lvIIGgG~IGlE~ 238 (542)
T 4b1b_A 174 LKGDLSKEETVTGKYILIATG---CRPHIPDDV---EGAK--ELSITSDDIFSLK-------KDPGKTLVVGASYVALEC 238 (542)
T ss_dssp EC--CCCEEEEEEEEEEECCC---EEECCCSSS---BTHH--HHCBCHHHHTTCS-------SCCCSEEEECCSHHHHHH
T ss_pred ecccCCceEEEeeeeEEeccC---CCCCCCCcc---cCCC--ccccCchhhhccc-------cCCceEEEECCCHHHHHH
Confidence 2221 1256899999999999 558888654 3321 1235555554432 346899999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHH
Q 041145 223 AVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESY 302 (522)
Q Consensus 223 a~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
|..++..+.+ ||++.|.. ++|..+. .+.
T Consensus 239 A~~~~~lG~~-----VTii~~~~--~L~~~D~---------------------------------------ei~------ 266 (542)
T 4b1b_A 239 SGFLNSLGYD-----VTVAVRSI--VLRGFDQ---------------------------------------QCA------ 266 (542)
T ss_dssp HHHHHHHTCC-----EEEEESSC--SSTTSCH---------------------------------------HHH------
T ss_pred HHHHHhcCCe-----EEEecccc--cccccch---------------------------------------hHH------
Confidence 9999999765 99998754 3444320 111
Q ss_pred HhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC--c--EEecCCceeeccEEEEec
Q 041145 303 LVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG--G--IEFEDKSKLEADVVLLAT 377 (522)
Q Consensus 303 ~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~--~--v~~~dG~~~~~D~VI~AT 377 (522)
..+.+.+++.+|+++.+. +.+++.. . |.+.+++++++|.|++||
T Consensus 267 -------------------------------~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAv 315 (542)
T 4b1b_A 267 -------------------------------VKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAI 315 (542)
T ss_dssp -------------------------------HHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECS
T ss_pred -------------------------------HHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcc
Confidence 112233456677888776 6666542 2 667888889999999999
Q ss_pred cCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccccc--chhhHHHHHHHHHHHHhcCCC
Q 041145 378 GYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV--SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 378 G~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~--~~~~~ae~qa~~~a~~l~g~~ 448 (522)
|.+|+... +..+..++..+..+........+.++.||||++|++.+. ...+.|..|++.++..+.|..
T Consensus 316 GR~Pnt~~---L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 316 GRKGDIDG---LNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDS 385 (542)
T ss_dssp CEEESCGG---GCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred cccCCccc---cCcccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCC
Confidence 99999532 212112222223343333444566899999999998643 345889999999999988753
No 77
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.93 E-value=3e-26 Score=245.91 Aligned_cols=309 Identities=16% Similarity=0.190 Sum_probs=185.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC-C-------CCCcccCC-CccCcccccCCCCC----cccCCCCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT-N-------SIGGVWKH-CSFNSTKLQTPRCD----FEFSDYPWPER 75 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~-~-------~~GG~w~~-~~~~~~~~~~~~~~----~~~~~~~~~~~ 75 (522)
.+||+|||||+||+++|..| .|++|+|||+. + .+||+|.+ .++|...+...... ..+..+.+...
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 46999999999999999999 89999999973 2 37887753 13333222110000 00111111100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCc-------CceE-eceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC
Q 041145 76 DDASFPSHVELLDYLHGYAVHFDVL-------KYIK-FNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN 147 (522)
Q Consensus 76 ~~~~~~~~~~~~~yl~~~~~~~~l~-------~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 147 (522)
.........++.+|++.+++++... ..+. +...+..++ .|.+.+.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~-------------------------~~~v~v~~~ 241 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLIS-------------------------PHEVQITDK 241 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE-------------------------TTEEEEECT
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcC-------------------------CCEEEEEeC
Confidence 0012345677777777666543210 0111 111222221 234555443
Q ss_pred Ce-eEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHH
Q 041145 148 QA-IQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVEC 226 (522)
Q Consensus 148 ~~-~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l 226 (522)
++ ..++.||+||+|||. .|+.|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|+|..+
T Consensus 242 ~g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l 305 (598)
T 2x8g_A 242 NQKVSTITGNKIILATGE---RPKYPEIP---GAVEY---GITSDDLFSL-------PYFPGKTLVIGASYVALECAGFL 305 (598)
T ss_dssp TCCEEEEEEEEEEECCCE---EECCCSST---THHHH---CEEHHHHTTC-------SSCCCSEEEECCSHHHHHHHHHH
T ss_pred CCCeEEEEeCEEEEeCCC---CCCCCCCC---Ccccc---eEcHHHHhhC-------ccCCCEEEEECCCHHHHHHHHHH
Confidence 32 246899999999994 58899999 87653 3455444331 24568999999999999999999
Q ss_pred HHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhc
Q 041145 227 AEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWK 306 (522)
Q Consensus 227 ~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (522)
++.+.+ ||++.|+ .++|..+ ..+..
T Consensus 306 ~~~g~~-----Vtlv~~~--~~l~~~d---------------------------------------~~~~~--------- 330 (598)
T 2x8g_A 306 ASLGGD-----VTVMVRS--ILLRGFD---------------------------------------QQMAE--------- 330 (598)
T ss_dssp HHTTCC-----EEEEESS--CSSTTSC---------------------------------------HHHHH---------
T ss_pred HHcCCE-----EEEEECC--cCcCcCC---------------------------------------HHHHH---------
Confidence 998654 9999987 2333221 00001
Q ss_pred CCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEe--------c---CcE----EecCCceee-
Q 041145 307 LPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFW--------S---GGI----EFEDKSKLE- 369 (522)
Q Consensus 307 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~--------~---~~v----~~~dG~~~~- 369 (522)
.+.+.+++.+|+++.+. +.+++ + +.+ .+.+|++++
T Consensus 331 ----------------------------~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~ 382 (598)
T 2x8g_A 331 ----------------------------KVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEE 382 (598)
T ss_dssp ----------------------------HHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEE
T ss_pred ----------------------------HHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEec
Confidence 11122334566666654 33432 1 223 235787655
Q ss_pred -ccEEEEeccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeeccc-c-cchhhHHHHHHHHHHHHhcC
Q 041145 370 -ADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIE-T-VSNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 370 -~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~-~-~~~~~~ae~qa~~~a~~l~g 446 (522)
+|.||+|||++++..+. .....++..++.+.+.+...+ .++.||||++|+.. + +...+.|..||+.+|..+.|
T Consensus 383 ~~D~vi~a~G~~p~~~~l---~~~~~gl~~~~~G~i~vd~~~-~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 383 EFETVIFAVGREPQLSKV---LCETVGVKLDKNGRVVCTDDE-QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp EESEEEECSCEEECGGGT---BCGGGCCCBCTTSCBCCCTTS-BCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEeCCccccCcc---CchhcCceECCCCcEEeCCCC-cCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 99999999999985321 111112222345556666654 47899999999883 3 33467899999999999876
Q ss_pred C
Q 041145 447 K 447 (522)
Q Consensus 447 ~ 447 (522)
.
T Consensus 459 ~ 459 (598)
T 2x8g_A 459 G 459 (598)
T ss_dssp C
T ss_pred C
Confidence 4
No 78
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.93 E-value=3.6e-26 Score=235.33 Aligned_cols=292 Identities=15% Similarity=0.164 Sum_probs=184.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC--CcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY--DPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .|. +|+|||+++.+. |....+ ++.+..-. ....++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~l--~~~~~~~~------------~~~~~~ 62 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLPPL--SKAYLAGK------------ATAESL 62 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSGGG--GTTTTTTC------------SCSGGG
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCCCC--cHHHhCCC------------CChHHh
Confidence 46999999999999999999 677 799999986542 111100 00000000 000001
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
......+.+++++ .+.++++|+.++. + ...|++.+++ ++.||+||+|||.
T Consensus 63 ~~~~~~~~~~~gv--~~~~~~~v~~i~~--~---------------------~~~v~~~~g~---~~~~d~lviAtG~-- 112 (431)
T 1q1r_A 63 YLRTPDAYAAQNI--QLLGGTQVTAINR--D---------------------RQQVILSDGR---ALDYDRLVLATGG-- 112 (431)
T ss_dssp BSSCHHHHHHTTE--EEECSCCEEEEET--T---------------------TTEEEETTSC---EEECSEEEECCCE--
T ss_pred cccCHHHHHhCCC--EEEeCCEEEEEEC--C---------------------CCEEEECCCC---EEECCEEEEcCCC--
Confidence 0011233455666 6778889999875 2 1257775553 7999999999995
Q ss_pred CCCCCCCCCCCCCccccCC-c-eeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 167 DIPRMPAFPANKGEEIFGG-K-VLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g-~-~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
.|+.|++| |.+ +.+ . +++.....+... .......+|+|+|||+|.+|+|+|..+++.+. +||++.|.
T Consensus 113 -~p~~~~i~---G~~-~~~~~~v~~~~~~~d~~~-l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~-----~Vtlv~~~ 181 (431)
T 1q1r_A 113 -RPRPLPVA---SGA-VGKANNFRYLRTLEDAEC-IRRQLIADNRLVVIGGGYIGLEVAATAIKANM-----HVTLLDTA 181 (431)
T ss_dssp -EECCCGGG---TTH-HHHSTTEEESSSHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSS
T ss_pred -CccCCCCC---Ccc-cCCCceEEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC-----EEEEEEeC
Confidence 48888888 875 222 1 333222221100 00112358999999999999999999999864 59999988
Q ss_pred CceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccc
Q 041145 245 LHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDY 324 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 324 (522)
+.. +|+.. ...
T Consensus 182 ~~~-l~~~~--------------------------------------~~~------------------------------ 192 (431)
T 1q1r_A 182 ARV-LERVT--------------------------------------APP------------------------------ 192 (431)
T ss_dssp SST-TTTTS--------------------------------------CHH------------------------------
T ss_pred Ccc-ccchh--------------------------------------hHH------------------------------
Confidence 752 11100 000
Q ss_pred ccccccccCcchhhhcccCcEEEEeCc-eeEEec---C----cEEecCCceeeccEEEEeccCCCCccccccCCCccccc
Q 041145 325 ASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS---G----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSL 396 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~---~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~ 396 (522)
+.+.+.+.+++.+|+++.+. +.+++. + +|.++||+++++|.||+|+|++++..+..-. ++
T Consensus 193 -------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~-----gl 260 (431)
T 1q1r_A 193 -------VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAA-----GL 260 (431)
T ss_dssp -------HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-----TC
T ss_pred -------HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhcc-----CC
Confidence 00111233445577888775 777764 2 4788899999999999999999985432111 11
Q ss_pred ccCcccccccccccccCCCCceeEeecccccc-----------hhhHHHHHHHHHHHHhcCCC
Q 041145 397 LADSSGIMPLYRGTIHPLIPNMAFVGYIETVS-----------NLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~-----------~~~~ae~qa~~~a~~l~g~~ 448 (522)
.. + +++.+...+ .++.||||++|++.... .++.|..||+.+|+.+.|..
T Consensus 261 ~~-~-~gi~Vd~~~-~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 261 QV-D-NGIVINEHM-QTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp CB-S-SSEECCTTS-BCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred CC-C-CCEEECCCc-ccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 11 2 235555554 46889999999765432 34679999999999998864
No 79
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.93 E-value=3.4e-25 Score=231.30 Aligned_cols=295 Identities=17% Similarity=0.210 Sum_probs=186.2
Q ss_pred CcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
+||+|||||++|+++|..| . |.+|+|||+++..++... ..+.. ... ......++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~--~~~~~----------~~~---------~~~~~~~l~ 95 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC--GLPYV----------ISG---------AIASTEKLI 95 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG--GHHHH----------HTT---------SSSCGGGGB
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC--Ccchh----------hcC---------CcCCHHHhh
Confidence 4899999999999999999 3 899999999876542111 01100 000 001111111
Q ss_pred -HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe-CCe-eEEEEECEEEEeeec
Q 041145 88 -DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET-NQA-IQWYGFELLVMCIGK 164 (522)
Q Consensus 88 -~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~d~vViAtG~ 164 (522)
.+.+.+.+++++ .+.++++|+.++. + .. .|++.+ .++ ..++.||+||+|||.
T Consensus 96 ~~~~~~~~~~~gv--~~~~~~~v~~i~~--~-------------------~~--~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 96 ARNVKTFRDKYGI--DAKVRHEVTKVDT--E-------------------KK--IVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp SSCHHHHHHTTCC--EEESSEEEEEEET--T-------------------TT--EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCHHHHHhhcCC--EEEeCCEEEEEEC--C-------------------CC--EEEEEEcCCCceEEEEcCEEEECCCC
Confidence 123344456677 6778899999876 3 22 355544 111 236899999999994
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhh-hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEee
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA-ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R 243 (522)
.|+.|++| |.+. . .+++...+.+..... ......+|+|+|||+|.+|+|+|..+++.+. +|+++.|
T Consensus 151 ---~p~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~-----~Vtlv~~ 217 (480)
T 3cgb_A 151 ---RPVMPEWE---GRDL-Q-GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGK-----KVRMIER 217 (480)
T ss_dssp ---EECCCCCB---TTTS-B-TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTC-----EEEEECC
T ss_pred ---cccCCCCC---CccC-C-CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCC-----eEEEEEe
Confidence 48888888 8753 2 355554443311000 0011278999999999999999999999864 5999998
Q ss_pred cCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccc
Q 041145 244 TLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEED 323 (522)
Q Consensus 244 ~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 323 (522)
.+.. ++..+ ..
T Consensus 218 ~~~~-l~~~~---------------------------------------~~----------------------------- 228 (480)
T 3cgb_A 218 NDHI-GTIYD---------------------------------------GD----------------------------- 228 (480)
T ss_dssp GGGT-TSSSC---------------------------------------HH-----------------------------
T ss_pred CCch-hhcCC---------------------------------------HH-----------------------------
Confidence 8751 11110 00
Q ss_pred cccccccccCcchhhhcccCcEEEEeCc-eeEEecCc-E--EecCCceeeccEEEEeccCCCCccccccCCCcccccccC
Q 041145 324 YASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGG-I--EFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLAD 399 (522)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~-v--~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~ 399 (522)
+.+.+.+.+++.+|+++.+. +.+++.++ + ...++.++++|.||+|||++++..+.. . .++..+
T Consensus 229 --------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~---~--~g~~~~ 295 (480)
T 3cgb_A 229 --------MAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLE---G--TNIRTN 295 (480)
T ss_dssp --------HHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGT---T--SCCCBC
T ss_pred --------HHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHH---h--CCcccC
Confidence 00111233445677787765 77776543 2 233566799999999999999853321 1 112223
Q ss_pred cccccccccccccCCCCceeEeeccccc-----------chhhHHHHHHHHHHHHhcCCC
Q 041145 400 SSGIMPLYRGTIHPLIPNMAFVGYIETV-----------SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 400 ~~~~~~l~~~~~~~~~pni~~vG~~~~~-----------~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+++.+.+...+ .++.||||++|++... ...+.|..|++.+|+.+.|..
T Consensus 296 ~~G~I~Vd~~~-~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 354 (480)
T 3cgb_A 296 HKGAIEVNAYM-QTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR 354 (480)
T ss_dssp TTSCBCCCTTS-BCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEECCCc-cCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC
Confidence 44556666654 4678999999977532 235789999999999998753
No 80
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.92 E-value=9.5e-26 Score=232.76 Aligned_cols=295 Identities=17% Similarity=0.212 Sum_probs=173.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.+||.|.. .. +.+....++..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~-gi------------------------p~~~~~~~~~~ 176 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY-GI------------------------PGFKLEKSVVE 176 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH-TS------------------------CTTTSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee-cC------------------------CCccCCHHHHH
Confidence 46899999999999999999 79999999999999998853 11 11222245667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
+...+++++++ .+++++.|. . .|++++. ...||+||+|||.. .
T Consensus 177 ~~~~~l~~~gv--~~~~~~~v~---~--------------------------~v~~~~~----~~~~d~vvlAtG~~--~ 219 (456)
T 2vdc_G 177 RRVKLLADAGV--IYHPNFEVG---R--------------------------DASLPEL----RRKHVAVLVATGVY--K 219 (456)
T ss_dssp HHHHHHHHTTC--EEETTCCBT---T--------------------------TBCHHHH----HSSCSEEEECCCCC--E
T ss_pred HHHHHHHHCCc--EEEeCCEec---c--------------------------EEEhhHh----HhhCCEEEEecCCC--C
Confidence 77777787777 566665541 0 0222221 24699999999954 3
Q ss_pred CCCCCCCCCCCccccCCceeeccccCCCchh----h--h-----hhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 041145 169 PRMPAFPANKGEEIFGGKVLHSMDYSKLDKE----A--A-----TELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQP 237 (522)
Q Consensus 169 p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~----~--~-----~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~ 237 (522)
|+.|++| |.+ ..| ++++.+|...... . . .....+|+|+|||+|.+|+|+|..+.+.+. ++
T Consensus 220 ~~~~~ip---G~~-~~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga----~~ 290 (456)
T 2vdc_G 220 ARDIKAP---GSG-LGN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA----TS 290 (456)
T ss_dssp ECCTTCS---CCT-TTT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC----SE
T ss_pred CCCCCCC---CCc-CCC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC----CE
Confidence 6777888 865 223 4443332110000 0 0 012578999999999999999999988763 36
Q ss_pred EEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCC
Q 041145 238 CTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPD 317 (522)
Q Consensus 238 Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 317 (522)
||++.|++...+|... ..+.. +.. .++.-.
T Consensus 291 Vtiv~r~~~~~~p~~~---------------------------------------~e~~~-----~~~------~Gv~~~ 320 (456)
T 2vdc_G 291 VKCLYRRDRKNMPGSQ---------------------------------------REVAH-----AEE------EGVEFI 320 (456)
T ss_dssp EEEECSSCSTTCSSCH---------------------------------------HHHHH-----HHH------TTCEEE
T ss_pred EEEEEeCCccCCCCCH---------------------------------------HHHHH-----HHH------CCCEEE
Confidence 9999998764333210 00000 000 000000
Q ss_pred CccccccccccccccCcchhhhcccCcE---EEEeCceeEEecCc---EEecCC--ceeeccEEEEeccCCCCcc--ccc
Q 041145 318 HPFEEDYASCQMAILPENFFSEAEKGNI---LFKRASKWWFWSGG---IEFEDK--SKLEADVVLLATGYDGKKK--LQS 387 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v---~v~~~~i~~~~~~~---v~~~dG--~~~~~D~VI~ATG~~~~~~--l~~ 387 (522)
. +.. ...+ ...+++ .+........++++ .+..+| .++++|.||+|+|+.++.. +..
T Consensus 321 ~-------~~~----~~~i---~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~ 386 (456)
T 2vdc_G 321 W-------QAA----PEGF---TGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFD 386 (456)
T ss_dssp C-------CSS----SCCE---EEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH
T ss_pred e-------CCC----ceEE---eCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcc
Confidence 0 000 0000 001111 11100000001111 222234 3589999999999998742 111
Q ss_pred cCCCcccccccCcccccccccccccCCCCceeEeecccc-cchhhHHHHHHHHHHHHhc
Q 041145 388 ILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIET-VSNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~-~~~~~~ae~qa~~~a~~l~ 445 (522)
. .++..++.+.+.+....+.++.|+||++|+... +.....|..|++.+|..+.
T Consensus 387 ---~--~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~ 440 (456)
T 2vdc_G 387 ---E--PELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIH 440 (456)
T ss_dssp ---S--TTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHH
T ss_pred ---c--CCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHH
Confidence 0 122223456666666545588999999998754 4446789999999988774
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.92 E-value=1.6e-25 Score=231.39 Aligned_cols=171 Identities=19% Similarity=0.182 Sum_probs=114.4
Q ss_pred ccCCcEEEECCCHHHHHHHHHh-C--------CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL-R--------HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDAS 79 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l-~--------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (522)
|+.++|+|||||++|+++|..| . +++|+|||+.+.+||.|..... +.
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~------------------------p~ 56 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA------------------------PD 56 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC------------------------TT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC------------------------CC
Confidence 3356999999999999999999 6 8999999999889998853111 22
Q ss_pred CCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEE
Q 041145 80 FPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLV 159 (522)
Q Consensus 80 ~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vV 159 (522)
++...++..++..+++++++ .+..+++| + . .|++.++ ++.||+||
T Consensus 57 ~~~~~~~~~~~~~~~~~~~v--~~~~~v~v-------~-------------------~---~v~~~~~----~~~~d~lV 101 (456)
T 1lqt_A 57 HPKIKSISKQFEKTAEDPRF--RFFGNVVV-------G-------------------E---HVQPGEL----SERYDAVI 101 (456)
T ss_dssp CTGGGGGHHHHHHHHTSTTE--EEEESCCB-------T-------------------T---TBCHHHH----HHHSSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCC--EEEeeEEE-------C-------------------C---EEEECCC----eEeCCEEE
Confidence 34455677788887776654 33333221 1 0 1333332 36899999
Q ss_pred EeeeccCCCCCCCCCCCCCCccccCCceeeccccC----CCchh-hhhhccCCCeEEEECCCCCHHHHHHHHHHhc----
Q 041145 160 MCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYS----KLDKE-AATELLEGKKVAIIGYRKSAIDLAVECAEAN---- 230 (522)
Q Consensus 160 iAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~----~~~~~-~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~---- 230 (522)
+|||.. .|+.|++| |.+ +.| ++|+.++. ...+. .....+++++|+|||+|++|+|+|..|++..
T Consensus 102 iAtG~~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~ 174 (456)
T 1lqt_A 102 YAVGAQ--SDRMLNIP---GED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLA 174 (456)
T ss_dssp ECCCCC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHT
T ss_pred EeeCCC--CCCCCCCC---CCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhc
Confidence 999953 26777888 876 444 56665441 00000 0011247899999999999999999998741
Q ss_pred -------------CCCCCCcEEEEeecCc
Q 041145 231 -------------QGPNGQPCTMVIRTLH 246 (522)
Q Consensus 231 -------------~~~~~~~Vt~v~R~~~ 246 (522)
.. ..++|+++.|++.
T Consensus 175 ~tdi~~~~~~~l~~~-g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 175 RTDIADHALESLRPR-GIQEVVIVGRRGP 202 (456)
T ss_dssp TSCCCHHHHHHHTTC-CCCEEEEECSSCG
T ss_pred CCCccHHHHHHHHHC-CCcEEEEEecCCh
Confidence 00 0247999999874
No 82
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.91 E-value=1.4e-25 Score=243.96 Aligned_cols=266 Identities=19% Similarity=0.168 Sum_probs=188.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||||++|+++|..| .|++|+|||+++.+||.|... .+ +.+....++.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~------------------------p~~~~~~~~~ 446 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESAL------------------------PGLSAWGRVK 446 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTS------------------------TTCGGGGHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCC------------------------CchhHHHHHH
Confidence 57999999999999999999 899999999999999987631 11 2233456788
Q ss_pred HHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 88 DYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 88 ~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
.|+...++++ ++ .++++++|+ ..+. .++.||+||+|||..
T Consensus 447 ~~~~~~~~~~~gv--~~~~~~~v~---------------------------------~~~~---~~~~~d~lvlAtG~~- 487 (690)
T 3k30_A 447 EYREAVLAELPNV--EIYRESPMT---------------------------------GDDI---VEFGFEHVITATGAT- 487 (690)
T ss_dssp HHHHHHHHTCTTE--EEESSCCCC---------------------------------HHHH---HHTTCCEEEECCCEE-
T ss_pred HHHHHHHHHcCCC--EEEECCeec---------------------------------HHHH---hhcCCCEEEEcCCCc-
Confidence 8888888776 54 344443321 1111 146799999999966
Q ss_pred CC------CCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEEC--CCCCHHHHHHHHHHhcCCCCCCcE
Q 041145 167 DI------PRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIG--YRKSAIDLAVECAEANQGPNGQPC 238 (522)
Q Consensus 167 ~~------p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG--~G~sg~dia~~l~~~~~~~~~~~V 238 (522)
.. |..|++| |.+. ..++++.++.. .....+++|+||| +|.+|+|+|..|++.+. +|
T Consensus 488 ~~~~~~~~~~~~~i~---G~~~--~~v~~~~~~l~------~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~-----~V 551 (690)
T 3k30_A 488 WRTDGVARFHTTALP---IAEG--MQVLGPDDLFA------GRLPDGKKVVVYDDDHYYLGGVVAELLAQKGY-----EV 551 (690)
T ss_dssp ECSSCCSSSCSSCCC---BCTT--SEEECHHHHHT------TCCCSSSEEEEEECSCSSHHHHHHHHHHHTTC-----EE
T ss_pred cccccccccCCCCCC---CCCC--CcEEcHHHHhC------CCCCCCCEEEEEcCCCCccHHHHHHHHHhCCC-----ee
Confidence 22 5577788 7763 45667666544 2345789999999 99999999999999865 59
Q ss_pred EEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCC
Q 041145 239 TMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDH 318 (522)
Q Consensus 239 t~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~ 318 (522)
|++.+.+... +...
T Consensus 552 tlv~~~~~l~-~~~~----------------------------------------------------------------- 565 (690)
T 3k30_A 552 SIVTPGAQVS-SWTN----------------------------------------------------------------- 565 (690)
T ss_dssp EEEESSSSTT-GGGG-----------------------------------------------------------------
T ss_pred EEEecccccc-cccc-----------------------------------------------------------------
Confidence 9999877411 1000
Q ss_pred ccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEec-----CCceeeccEEEEeccCCCCccccccCCCc
Q 041145 319 PFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFE-----DKSKLEADVVLLATGYDGKKKLQSILPKP 392 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~-----dG~~~~~D~VI~ATG~~~~~~l~~~~~~~ 392 (522)
.+.....+.+.+++.+|+++.+. +.+++++++.+. +++++++|.||+|||++++..+..
T Consensus 566 ----------~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~----- 630 (690)
T 3k30_A 566 ----------NTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYL----- 630 (690)
T ss_dssp ----------GGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHH-----
T ss_pred ----------cchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHH-----
Confidence 00011123344567789999886 888988876654 455799999999999999843211
Q ss_pred ccccccCcccccccccccccCCCCceeEeecccccchhhHHHHHHHHHHHHhcCCC
Q 041145 393 FSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
.+. ..+. .++.||||++|+...+..+..|..||+.+|..+.+.+
T Consensus 631 --~l~--~~~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 631 --DLV--ARRD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp --HHH--HHHH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCC
T ss_pred --HHh--hhhc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhc
Confidence 010 0110 5788999999998887777789999999999998774
No 83
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.91 E-value=5e-25 Score=227.43 Aligned_cols=295 Identities=12% Similarity=0.126 Sum_probs=189.5
Q ss_pred CcEEEECCCHHHHHHHHHh-C----CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 12 SKIGIIGAGISGIATAKQL-R----HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l-~----g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
++|+|||||++|+++|..| . +++|+|||+++... |..... .+. ......+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~-------~~~---------~g~~~~~~~ 61 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNP-------WVG---------VGWKERDDI 61 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHH-------HHH---------HTSSCHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCcc-------ccc---------cCccCHHHH
Confidence 4899999999999999999 3 78999999986431 100000 000 122345566
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
..++..++++.++ .+ +..+|+.++. +. ..|+++++. ++.||+||+|||
T Consensus 62 ~~~l~~~~~~~gv--~~-~~~~v~~id~--~~---------------------~~V~~~~g~---~i~~d~lviAtG--- 109 (437)
T 3sx6_A 62 AFPIRHYVERKGI--HF-IAQSAEQIDA--EA---------------------QNITLADGN---TVHYDYLMIATG--- 109 (437)
T ss_dssp EEECHHHHHTTTC--EE-ECSCEEEEET--TT---------------------TEEEETTSC---EEECSEEEECCC---
T ss_pred HHHHHHHHHHCCC--EE-EEeEEEEEEc--CC---------------------CEEEECCCC---EEECCEEEECCC---
Confidence 6666777777776 34 3568888875 21 157776654 799999999999
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhh--hhhccCCCeEEEECCCCCH------HHHHHHHHHh----cCCCC
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA--ATELLEGKKVAIIGYRKSA------IDLAVECAEA----NQGPN 234 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~--~~~~~~~k~V~VIG~G~sg------~dia~~l~~~----~~~~~ 234 (522)
+.|+.|.+| |++.+.+..++...+.+..... .....++++++|||+|.+| +|+|.+++.. +.. .
T Consensus 110 ~~~~~~~ip---G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~-~ 185 (437)
T 3sx6_A 110 PKLAFENVP---GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMR-D 185 (437)
T ss_dssp CEECGGGST---TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCG-G
T ss_pred CCcCcccCC---CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCc-c
Confidence 457888899 9876545444433333211000 0011225678899996654 9999766643 211 0
Q ss_pred CCc-EEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCC
Q 041145 235 GQP-CTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFG 313 (522)
Q Consensus 235 ~~~-Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
..+ ||++.+.+... +.. ..+.
T Consensus 186 ~~~~Vtlv~~~~~~~-~~~-l~~~-------------------------------------------------------- 207 (437)
T 3sx6_A 186 KIPSFTFITSEPYIG-HLG-IQGV-------------------------------------------------------- 207 (437)
T ss_dssp GCSCEEEEESSSSTT-CTT-TTCC--------------------------------------------------------
T ss_pred cCcEEEEEcCCcccc-ccc-cCcc--------------------------------------------------------
Confidence 112 99998877410 000 0000
Q ss_pred CCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecC---------CceeeccEEEEeccCCCCc
Q 041145 314 LKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFED---------KSKLEADVVLLATGYDGKK 383 (522)
Q Consensus 314 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~d---------G~~~~~D~VI~ATG~~~~~ 383 (522)
+.....+.+.+++.+|+++.+. +.+++++++++++ |+++++|.||+|+|+.++.
T Consensus 208 ----------------~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~ 271 (437)
T 3sx6_A 208 ----------------GDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP 271 (437)
T ss_dssp ----------------TTHHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH
T ss_pred ----------------hHHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCch
Confidence 0011122244557789998887 8899988887765 6679999999999999874
Q ss_pred cccccCCCcccccccCcccccccccccccCCCCceeEeeccccc-------------chhhHHHHHHHHHHHHhc
Q 041145 384 KLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETV-------------SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~-------------~~~~~ae~qa~~~a~~l~ 445 (522)
.+.. ..++ .++.+.+.++..+..+++||||++|+.... .....|..||+.+|+.|.
T Consensus 272 ~~~~-----~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 272 AVAG-----VEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp HHHT-----STTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhc-----cccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 3321 1122 345677788888777799999999976542 235789999999988775
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.91 E-value=4.8e-25 Score=230.67 Aligned_cols=314 Identities=15% Similarity=0.100 Sum_probs=182.7
Q ss_pred cccCCcEEEECCCHHHHHHHHHh----CCCCcEEEccCCCCCcccCCCccCcccccCCCC-----CcccCCCCCCCC---
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL----RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRC-----DFEFSDYPWPER--- 75 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--- 75 (522)
+|..++|+|||||+||+++|..| .+.+|+|||+++.++. .. +-++..+..... .+.|.+++..+.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r-~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MR-PPLSKELWFSDDPNVTKTLRFKQWNGKERSIY 84 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CS-GGGGTGGGCC--CTHHHHCEEECTTSCEEESB
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CC-CCCCHHhhcCCccchhhccccccccccccccc
Confidence 34457999999999999999988 3899999999876541 11 101111100000 011111111000
Q ss_pred -CC-CCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEE
Q 041145 76 -DD-ASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWY 153 (522)
Q Consensus 76 -~~-~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 153 (522)
.. ..+....++.+ ..+.++ .++++++|+.++. + .++|++.+++ ++
T Consensus 85 ~~~~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~--~---------------------~~~V~~~~g~---~i 131 (493)
T 1m6i_A 85 FQPPSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDV--R---------------------DNMVKLNDGS---QI 131 (493)
T ss_dssp SSCGGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEG--G---------------------GTEEEETTSC---EE
T ss_pred ccchHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEEC--C---------------------CCEEEECCCC---EE
Confidence 00 01111111100 122344 5677889988876 2 2367776654 79
Q ss_pred EECEEEEeeeccCCCCCCCCCCCCCCcc--ccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcC
Q 041145 154 GFELLVMCIGKFGDIPRMPAFPANKGEE--IFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQ 231 (522)
Q Consensus 154 ~~d~vViAtG~~s~~p~~p~~p~~~G~~--~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~ 231 (522)
.||+||+|||. .|+.|+++ |.. .+...+.+.....+... .......+|+|+|||+|.+|+|+|..|++.+.
T Consensus 132 ~yd~lviATGs---~p~~~~~~---~~~~~~~~~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~ 204 (493)
T 1m6i_A 132 TYEKCLIATGG---TPRSLSAI---DRAGAEVKSRTTLFRKIGDFRS-LEKISREVKSITIIGGGFLGSELACALGRKAR 204 (493)
T ss_dssp EEEEEEECCCE---EECCCHHH---HTSCHHHHHTEEECCSHHHHHH-HHHHHHHCSEEEEECCSHHHHHHHHHHHHHHH
T ss_pred ECCEEEECCCC---CCCCCCCc---ccccccccCceEEEcCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhhhh
Confidence 99999999994 47777665 421 11122222222211100 00112358999999999999999999987421
Q ss_pred CCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCccc
Q 041145 232 GPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVK 311 (522)
Q Consensus 232 ~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+ .+.+|+++.+.+.++ ++.. | ..
T Consensus 205 ~-~g~~V~~v~~~~~~~-~~~l----~----------------------------------~~----------------- 227 (493)
T 1m6i_A 205 A-LGTEVIQLFPEKGNM-GKIL----P----------------------------------EY----------------- 227 (493)
T ss_dssp H-HTCEEEEECSSSSTT-TTTS----C----------------------------------HH-----------------
T ss_pred h-cCCEEEEEecCcccc-cccC----C----------------------------------HH-----------------
Confidence 0 023599888765311 1000 0 00
Q ss_pred CCCCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCceeeccEEEEeccCCCCcccc
Q 041145 312 FGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKLQ 386 (522)
Q Consensus 312 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~ 386 (522)
+.+.+.+.+++.+|+++.+. |.+++.+ .|+++||+++++|.||+|+|++++..+.
T Consensus 228 --------------------~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 228 --------------------LSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp --------------------HHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTH
T ss_pred --------------------HHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHH
Confidence 11112234557788888886 7777642 3778899999999999999999985332
Q ss_pred ccCCCcccccccCc-ccccccccccccCCCCceeEeeccccc----------chhhHHHHHHHHHHHHhcCCC
Q 041145 387 SILPKPFSSLLADS-SGIMPLYRGTIHPLIPNMAFVGYIETV----------SNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 387 ~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~pni~~vG~~~~~----------~~~~~ae~qa~~~a~~l~g~~ 448 (522)
.- .++..++ .+.+.+..++.. .||||++|++... ..++.|..|++.+|+.+.|..
T Consensus 288 ~~-----~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 288 KT-----GGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp HH-----HTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred HH-----cCCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 11 1121222 345556655543 5999999976542 124589999999999998763
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.90 E-value=9.7e-24 Score=218.30 Aligned_cols=167 Identities=20% Similarity=0.217 Sum_probs=113.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC--CCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH--YDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .+ ++|+|||+.+.+||.|+.... +.++...++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~------------------------p~~~~~~~~ 61 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA------------------------PDHPEVKNV 61 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC------------------------TTCGGGGGH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC------------------------CCCccHHHH
Confidence 45999999999999999999 56 999999999999988854211 223334567
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
..++..+++++++ .+.+++.|. . .|++.+. .+.||+||+|||..
T Consensus 62 ~~~~~~~~~~~gv--~~~~~~~v~------~-----------------------~V~~~~~----~~~~d~lVlAtGs~- 105 (460)
T 1cjc_A 62 INTFTQTARSDRC--AFYGNVEVG------R-----------------------DVTVQEL----QDAYHAVVLSYGAE- 105 (460)
T ss_dssp HHHHHHHHTSTTE--EEEBSCCBT------T-----------------------TBCHHHH----HHHSSEEEECCCCC-
T ss_pred HHHHHHHHHhCCc--EEEeeeEEe------e-----------------------EEEeccc----eEEcCEEEEecCcC-
Confidence 7788888877776 455554431 0 1222221 36799999999943
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCC----Cchhhh-hhccCCCeEEEECCCCCHHHHHHHHHH-------------
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSK----LDKEAA-TELLEGKKVAIIGYRKSAIDLAVECAE------------- 228 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~----~~~~~~-~~~~~~k~V~VIG~G~sg~dia~~l~~------------- 228 (522)
.|+.|++| |.+ ..| ++++.++.. ..+... ...+.+|+|+|||+|++|+|+|..|++
T Consensus 106 -~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~ 179 (460)
T 1cjc_A 106 -DHQALDIP---GEE-LPG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEA 179 (460)
T ss_dssp -EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHH
T ss_pred -CCCCCCCC---CCC-CCc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHH
Confidence 14778888 875 333 555544411 000000 112468999999999999999999983
Q ss_pred -------hcCCCCCCcEEEEeecCce
Q 041145 229 -------ANQGPNGQPCTMVIRTLHW 247 (522)
Q Consensus 229 -------~~~~~~~~~Vt~v~R~~~~ 247 (522)
.+ .++|+++.|++.+
T Consensus 180 a~~~l~~~g----~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 180 ALGALRQSR----VKTVWIVGRRGPL 201 (460)
T ss_dssp HHHHHHTCC----CCEEEEECSSCGG
T ss_pred HHHHHhhCC----CcEEEEEEcCChH
Confidence 22 2369999998753
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.90 E-value=3e-23 Score=232.66 Aligned_cols=288 Identities=13% Similarity=0.123 Sum_probs=181.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+|||||+||++||..| .|++|+|||+++.+||.|.. + +...+ ... ...++..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i-------------------~~~-~~~~~~~ 185 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI-------------------DGM-DSSAWIE 185 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE-------------------TTE-EHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc-------------------CCC-CHHHHHH
Confidence 46899999999999999999 89999999999999998873 1 11000 011 1234444
Q ss_pred HHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe---CCeeEEEEECEEEEeeec
Q 041145 89 YLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET---NQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 89 yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~d~vViAtG~ 164 (522)
.+.....++ ++ .++.+++|..+.. +...... .. ....+.+...+ .+...++.||+||||||.
T Consensus 186 ~~~~~l~~~~~v--~~~~~~~V~~i~~--~~~~~~v--------~~--~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs 251 (965)
T 2gag_A 186 QVTSELAEAEET--THLQRTTVFGSYD--ANYLIAA--------QR--RTVHLDGPSGPGVSRERIWHIRAKQVVLATGA 251 (965)
T ss_dssp HHHHHHHHSTTE--EEESSEEEEEEET--TTEEEEE--------EE--CSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE
T ss_pred HHHHHHhhcCCc--EEEeCCEEEeeec--CCceeee--------Ee--ecccccccccccCCCCceEEEECCEEEECCCC
Confidence 433333443 55 5777888888764 1000000 00 00011111100 011236899999999995
Q ss_pred cCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 165 FGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 165 ~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
. |+.|++| |.+. .| ++++..+..... ......+|+|+|||+|.+|+|+|..|++.+.+ |+++.|+
T Consensus 252 ~---p~~~~ip---G~~~-~g-v~~~~~~~~~l~--~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~-----Vtvv~~~ 316 (965)
T 2gag_A 252 H---ERPIVFE---NNDR-PG-IMLAGAVRSYLN--RYGVRAGARIAVATTNDSAYELVRELAATGGV-----VAVIDAR 316 (965)
T ss_dssp E---ECCCCCB---TCCS-TT-EEEHHHHHHHHH--TTCEESCSSEEEEESSTTHHHHHHHHGGGTCC-----SEEEESC
T ss_pred c---cCCCCCC---CCCC-CC-EEEhHHHHHHHH--hcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc-----EEEEECC
Confidence 4 7888888 8653 23 555533321100 01234679999999999999999999998654 9999988
Q ss_pred CceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccc
Q 041145 245 LHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDY 324 (522)
Q Consensus 245 ~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 324 (522)
+... + .
T Consensus 317 ~~~~-~------------------------------------------~------------------------------- 322 (965)
T 2gag_A 317 SSIS-A------------------------------------------A------------------------------- 322 (965)
T ss_dssp SSCC-H------------------------------------------H-------------------------------
T ss_pred Cccc-h------------------------------------------h-------------------------------
Confidence 7410 0 0
Q ss_pred ccccccccCcchhhhcccCcEEEEeCc-eeEEec--C----cEEecC-------C--ceeeccEEEEeccCCCCcccccc
Q 041145 325 ASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS--G----GIEFED-------K--SKLEADVVLLATGYDGKKKLQSI 388 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~--~----~v~~~d-------G--~~~~~D~VI~ATG~~~~~~l~~~ 388 (522)
.+.+++.+|+++.+. +.++.. + +|++++ | +++++|.||+|+|++|+..+...
T Consensus 323 ------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~ 390 (965)
T 2gag_A 323 ------------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ 390 (965)
T ss_dssp ------------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH
T ss_pred ------------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh
Confidence 122335567777776 667765 2 477765 5 56899999999999998533211
Q ss_pred CCCcccccccCccccccccccc--c--cCCCCceeEeecccccchhhHHHHHHHHHHHHhcC
Q 041145 389 LPKPFSSLLADSSGIMPLYRGT--I--HPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~--~--~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g 446 (522)
. .+.+.+...+ + .++.||||++|...+...+..|..|++.+|..+.+
T Consensus 391 ~-----------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 391 R-----------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAAAAT 441 (965)
T ss_dssp T-----------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHH
T ss_pred C-----------CCcEEEcCcccccccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHHH
Confidence 1 1112222111 1 36789999999887765566899999999988753
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.90 E-value=2e-24 Score=235.95 Aligned_cols=277 Identities=18% Similarity=0.146 Sum_probs=181.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-ccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-SFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||||+||+++|..| .|++|+|||+.+.+||.|... .+| .+.....+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~p------------------------g~~~~~~~~ 444 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALP------------------------GLGEWSYHR 444 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTST------------------------TCGGGHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCC------------------------ChHHHHHHH
Confidence 46999999999999999999 899999999999999988641 111 112234556
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
+|+...++.+. ..+..++.+.. + ..|++++. ..+.||+||+|||....
T Consensus 445 ~~~~~~i~~~~-----~~~~~~v~i~~--~----------------------~~v~~~~~---~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 445 DYRETQITKLL-----KKNKESQLALG--Q----------------------KPMTADDV---LQYGADKVIIATGARWN 492 (729)
T ss_dssp HHHHHHHHHHH-----HHSTTCEEECS--C----------------------CCCCHHHH---HTSCCSEEEECCCEEEC
T ss_pred HHHHHHHHHhh-----cccCCceEEEe--C----------------------eEEehhhc---cccCCCEEEEcCCCCcc
Confidence 66655555431 01111222221 1 01222222 14779999999997511
Q ss_pred -----CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEEC--CCCCHHHHHHHHHHhcCCCCCCcEEE
Q 041145 168 -----IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIG--YRKSAIDLAVECAEANQGPNGQPCTM 240 (522)
Q Consensus 168 -----~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG--~G~sg~dia~~l~~~~~~~~~~~Vt~ 240 (522)
.|+.|++| |.++|.+.++++.++.. .....+|+|+||| +|.+|+|+|..|++.+. +||+
T Consensus 493 ~~~~~~p~~~~ip---G~~~~~~~v~~~~~~l~------~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~-----~Vtl 558 (729)
T 1o94_A 493 TDGTNCLTHDPIP---GADASLPDQLTPEQVMD------GKKKIGKRVVILNADTYFMAPSLAEKLATAGH-----EVTI 558 (729)
T ss_dssp SSCCCTTTSSCCT---TCCTTSTTEECHHHHHH------CCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-----EEEE
T ss_pred cccccCccCCCCC---CccccCCCEEEHHHHhc------CCCCCCCeEEEEcCCCCchHHHHHHHHHHcCC-----EEEE
Confidence 15677888 98876667777766533 2335689999999 99999999999999865 5999
Q ss_pred EeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcc
Q 041145 241 VIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPF 320 (522)
Q Consensus 241 v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 320 (522)
+.|.+ +.+... +..
T Consensus 559 v~~~~--l~~~~~----------------------------------~~~------------------------------ 572 (729)
T 1o94_A 559 VSGVH--LANYMH----------------------------------FTL------------------------------ 572 (729)
T ss_dssp EESSC--TTHHHH----------------------------------HTT------------------------------
T ss_pred Eeccc--cccccc----------------------------------ccc------------------------------
Confidence 99877 222100 000
Q ss_pred ccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEec----CC-ce------------------eeccEEEEe
Q 041145 321 EEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFE----DK-SK------------------LEADVVLLA 376 (522)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~----dG-~~------------------~~~D~VI~A 376 (522)
....+.+.+++.+|+++.+. +.+++++++.+. ++ ++ +++|.||+|
T Consensus 573 -----------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a 641 (729)
T 1o94_A 573 -----------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLV 641 (729)
T ss_dssp -----------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEE
T ss_pred -----------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEEC
Confidence 00111233446678888776 777777665542 33 22 899999999
Q ss_pred ccCCCCccccccCCCcccccccCcccccccccccccCCCCceeEeecccccchhhHHHHHHHHHHHHhcCCC
Q 041145 377 TGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQKF 448 (522)
Q Consensus 377 TG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g~~ 448 (522)
+|++++..+.. ++.. .+.. .+.++.|+||++|+...+..+..|..||+.+|..|.+.+
T Consensus 642 ~G~~p~~~l~~-------~l~~------~vd~-~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 642 TGRHSECTLWN-------ELKA------RESE-WAENDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp SCEEECCHHHH-------HHHH------TGGG-TGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCCCChHHHH-------HHhh------hccc-ccccCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 99999853221 1110 0111 123678999999998776667789999999999997653
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.89 E-value=2.4e-23 Score=225.90 Aligned_cols=287 Identities=18% Similarity=0.194 Sum_probs=172.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+||+++|..| .|++|+|||+++.+||.|.... . . +......++..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~---~-------------~-------~~~~~~~~~~~ 429 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK---Q-------------I-------PGKEEFYETLR 429 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT---T-------------S-------TTCTTHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc---c-------------C-------CCHHHHHHHHH
Confidence 46999999999999999999 7999999999999999875310 0 0 11112345566
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEE-EECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWY-GFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~d~vViAtG~~s~ 167 (522)
++...++++++ .+++++.|.. . .+ .||+||+|||.
T Consensus 430 ~~~~~~~~~gv--~~~~~~~v~~-----------------------------------~----~~~~~d~lviAtG~--- 465 (671)
T 1ps9_A 430 YYRRMIEVTGV--TLKLNHTVTA-----------------------------------D----QLQAFDETILASGI--- 465 (671)
T ss_dssp HHHHHHHHHTC--EEEESCCCCS-----------------------------------S----SSCCSSEEEECCCE---
T ss_pred HHHHHHHHcCC--EEEeCcEecH-----------------------------------H----HhhcCCEEEEccCC---
Confidence 67777777776 4555543310 0 13 69999999994
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec--C
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT--L 245 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~--~ 245 (522)
.|+.|++| |.+. ..++++.++.. .....+|+|+|||+|.+|+|+|..|++.+.+ |+++... .
T Consensus 466 ~p~~~~i~---G~~~--~~v~~~~~~l~------~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~-----vtv~~~~~~~ 529 (671)
T 1ps9_A 466 VPRTPPID---GIDH--PKVLSYLDVLR------DKAPVGNKVAIIGCGGIGFDTAMYLSQPGES-----TSQNIAGFCN 529 (671)
T ss_dssp EECCCCCB---TTTS--TTEEEHHHHHT------SCCCCCSEEEEECCHHHHHHHHHHHTCCSSC-----GGGCHHHHHH
T ss_pred CcCCCCCC---CCCC--CcEeeHHHHhh------CCCCCCCeEEEECCChhHHHHHHHHHhcCCC-----cccchhhhhh
Confidence 58888899 8764 34666654432 2235689999999999999999999887543 4432100 0
Q ss_pred ceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCC-CCCCcccccc
Q 041145 246 HWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGL-KPDHPFEEDY 324 (522)
Q Consensus 246 ~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~p~~~~~~~~ 324 (522)
.|-..... .....+.. ..+... .....-.+ .+........
T Consensus 530 ~~g~~~~~--------~~~~~~~~-~~~~~~------------------------------~~~~~v~l~~~~~~~l~~~ 570 (671)
T 1ps9_A 530 EWGIDSSL--------QQAGGLSP-QGMQIP------------------------------RSPRQIVMLQRKASKPGQG 570 (671)
T ss_dssp HTTBCTTC--------CSGGGBCT-TCCCCC------------------------------CCSSEEEEECSSCSCTTTT
T ss_pred hhcccccc--------cccccccc-cccccC------------------------------CCCcEEEEEEecchhhccc
Confidence 00000000 00000000 000000 00000000 0000000000
Q ss_pred ccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEe-cCC--ceeeccEEEEeccCCCCccccccCCCcccccccCc
Q 041145 325 ASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEF-EDK--SKLEADVVLLATGYDGKKKLQSILPKPFSSLLADS 400 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~-~dG--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~ 400 (522)
.-+.....+.+.+++.+|+++.+. +.+++++++++ .+| +++++|.||+|||++++..+.. .+.
T Consensus 571 ---l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~-------~l~--- 637 (671)
T 1ps9_A 571 ---LGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQ-------PLI--- 637 (671)
T ss_dssp ---SCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHH-------HHH---
T ss_pred ---cccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHH-------HHH---
Confidence 000011123455778899999987 88898888888 688 5699999999999999842210 010
Q ss_pred ccccccccccccCCCCceeEeecccccch--hhHHHHHHHHHHHHh
Q 041145 401 SGIMPLYRGTIHPLIPNMAFVGYIETVSN--LQIAEIRCKWLARLA 444 (522)
Q Consensus 401 ~~~~~l~~~~~~~~~pni~~vG~~~~~~~--~~~ae~qa~~~a~~l 444 (522)
...+++|++|+...... ...|..||..+|..|
T Consensus 638 ------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 638 ------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred ------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 11268999998765443 678999999999764
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.88 E-value=2.3e-23 Score=214.56 Aligned_cols=292 Identities=15% Similarity=0.134 Sum_probs=174.7
Q ss_pred CcEEEECCCHHHHHHHHHh----CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL----RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
++|+|||||++|+++|..| .+++|+|||+++.+++... .+... .......++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~---~~~~~--------------------~g~~~~~~~~ 59 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA---FPHLA--------------------MGWRKFEDIS 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG---HHHHH--------------------HTCSCGGGSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC---cchhc--------------------cCccCHHHHH
Confidence 5899999999999999999 3789999999876643211 00000 0001111111
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
..+..++++.++ .+. ..+|+.++. +. ..|++.++. ++.||+||+|||.
T Consensus 60 ~~~~~~~~~~gv--~~~-~~~v~~id~--~~---------------------~~v~~~~g~---~i~~d~liiAtG~--- 107 (430)
T 3h28_A 60 VPLAPLLPKFNI--EFI-NEKAESIDP--DA---------------------NTVTTQSGK---KIEYDYLVIATGP--- 107 (430)
T ss_dssp EESTTTGGGGTE--EEE-CSCEEEEET--TT---------------------TEEEETTCC---EEECSEEEECCCC---
T ss_pred HHHHHHHHhcCC--EEE-EEEEEEEEC--CC---------------------CEEEECCCc---EEECCEEEEcCCc---
Confidence 222233444554 333 357888875 21 156665553 6899999999994
Q ss_pred CCCCCCCCCCCCccccCCceeeccccCCCchhh--hhhccCCCeEEEECCCCCH------HHHHHHHHH----hcCCCCC
Q 041145 168 IPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEA--ATELLEGKKVAIIGYRKSA------IDLAVECAE----ANQGPNG 235 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~--~~~~~~~k~V~VIG~G~sg------~dia~~l~~----~~~~~~~ 235 (522)
.|..| |+.. .+...+...+.+..... .....++++++|||+|.+| +|+|..++. .+.. ..
T Consensus 108 ~~~~p------g~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~-~~ 179 (430)
T 3h28_A 108 KLVFG------AEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIR-YK 179 (430)
T ss_dssp EEECC------SBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCG-GG
T ss_pred ccccC------CCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCc-cc
Confidence 35554 3321 11111111111110000 0011235678899998765 999877654 2210 01
Q ss_pred CcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCC
Q 041145 236 QPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLK 315 (522)
Q Consensus 236 ~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (522)
.+|+++.+.+... +.. ..+.
T Consensus 180 ~~V~~v~~~~~~~-~~~-l~~~---------------------------------------------------------- 199 (430)
T 3h28_A 180 VPMTFITSEPYLG-HFG-VGGI---------------------------------------------------------- 199 (430)
T ss_dssp CCEEEECSSSSTT-CTT-TTCS----------------------------------------------------------
T ss_pred eEEEEecCCcccc-ccc-cCcc----------------------------------------------------------
Confidence 3588887765310 000 0000
Q ss_pred CCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEecCcEEecC----CceeeccEEEEeccCCCCccccccCC
Q 041145 316 PDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWSGGIEFED----KSKLEADVVLLATGYDGKKKLQSILP 390 (522)
Q Consensus 316 p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~~v~~~d----G~~~~~D~VI~ATG~~~~~~l~~~~~ 390 (522)
+.....+.+.+++.+|+++.+. |.+++++++++++ |+++++|.||+|+|++++..+... .
T Consensus 200 --------------~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~-~ 264 (430)
T 3h28_A 200 --------------GASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA-G 264 (430)
T ss_dssp --------------TTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTT-C
T ss_pred --------------hHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhc-c
Confidence 0011122345567789999887 8899999999988 788999999999999977432211 0
Q ss_pred CcccccccCccc-ccccccccccCCCCceeEeeccccc-------------chhhHHHHHHHHHHHHhc
Q 041145 391 KPFSSLLADSSG-IMPLYRGTIHPLIPNMAFVGYIETV-------------SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 391 ~~~~~~~~~~~~-~~~l~~~~~~~~~pni~~vG~~~~~-------------~~~~~ae~qa~~~a~~l~ 445 (522)
..+ .++++ .+.+...+..+++||||++|+.... .....|..||+.+|+.|.
T Consensus 265 ---~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 265 ---DKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp ---TTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ---ccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 122 34566 6788887777799999999976542 235789999999888774
No 90
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.87 E-value=8.1e-23 Score=210.28 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=75.2
Q ss_pred hhcccCcEEEEeCc-eeEEecCcEEecC--C--ceeeccEEEEeccCCCCccccccCCCcccccccCccccccccccccc
Q 041145 338 SEAEKGNILFKRAS-KWWFWSGGIEFED--K--SKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIH 412 (522)
Q Consensus 338 ~~l~~~~v~v~~~~-i~~~~~~~v~~~d--G--~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 412 (522)
+.+++.+|+++.+. +.+++++++++++ | +++++|.||||+|.+++..+.. ....+..+..+.+.+...+.+
T Consensus 208 ~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~----~~~~l~~~~~g~i~vd~~lq~ 283 (430)
T 3hyw_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVAS----AGDKVANPANKMVIVNRCFQN 283 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHT----TCTTTBCTTTCCBCCCTTSBC
T ss_pred HHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHh----cccccccCCceEEEecccccC
Confidence 44567789999988 8899999888765 3 4689999999999998742211 111122223445667777778
Q ss_pred CCCCceeEeeccccc-------------chhhHHHHHHHHHHHHhc
Q 041145 413 PLIPNMAFVGYIETV-------------SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 413 ~~~pni~~vG~~~~~-------------~~~~~ae~qa~~~a~~l~ 445 (522)
+++||||++|++... .+.+.|..||+.+|++|.
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 999999999976532 234689999999999885
No 91
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.87 E-value=1.8e-22 Score=227.92 Aligned_cols=170 Identities=22% Similarity=0.280 Sum_probs=110.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||||+||+++|..| .|+ +|+|||+.+.+||++.. ..| .|....++.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~-~ip------------------------~~~~~~~~~ 241 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS-EIP------------------------QFRLPYDVV 241 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH-TSC------------------------TTTSCHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc-cCC------------------------cccCCHHHH
Confidence 46899999999999999999 898 79999999999998643 111 111123456
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.+...+.+++++ .+++++.|.. +.|++.+. .++.||+||+|||..
T Consensus 242 ~~~~~~~~~~gv--~~~~~~~v~~----------------------------~~v~~~~~---~~~~~d~vvlAtGa~-- 286 (1025)
T 1gte_A 242 NFEIELMKDLGV--KIICGKSLSE----------------------------NEITLNTL---KEEGYKAAFIGIGLP-- 286 (1025)
T ss_dssp HHHHHHHHTTTC--EEEESCCBST----------------------------TSBCHHHH---HHTTCCEEEECCCCC--
T ss_pred HHHHHHHHHCCc--EEEcccEecc----------------------------ceEEhhhc---CccCCCEEEEecCCC--
Confidence 666666777776 4555554410 01333222 136799999999952
Q ss_pred CCCCCCC-CCCCCccccCCceeeccccCCCchhh---------hhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 041145 168 IPRMPAF-PANKGEEIFGGKVLHSMDYSKLDKEA---------ATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQP 237 (522)
Q Consensus 168 ~p~~p~~-p~~~G~~~f~g~~~hs~~~~~~~~~~---------~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~ 237 (522)
.|+.+++ + |++...| ++++.+|....... ......+++|+|||||.+|+|+|..+++.+. ++
T Consensus 287 ~p~~l~~~~---G~~~~~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~----~~ 358 (1025)
T 1gte_A 287 EPKTDDIFQ---GLTQDQG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGA----RR 358 (1025)
T ss_dssp EECCCGGGT---TCCTTTT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTC----SE
T ss_pred CCCCCCCCC---CCCCCCC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCC----CE
Confidence 3665553 4 5543322 55554442210000 0011246799999999999999999998863 36
Q ss_pred EEEEeecCcee
Q 041145 238 CTMVIRTLHWT 248 (522)
Q Consensus 238 Vt~v~R~~~~~ 248 (522)
||++.|++...
T Consensus 359 Vtvv~r~~~~~ 369 (1025)
T 1gte_A 359 VFLVFRKGFVN 369 (1025)
T ss_dssp EEEECSSCGGG
T ss_pred EEEEEecChhh
Confidence 99999987433
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.86 E-value=1.1e-21 Score=205.21 Aligned_cols=260 Identities=13% Similarity=0.133 Sum_probs=165.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.+||+|||||++|+++|..| . ++|+|||+++.+||.|....+.. .. + +. ...++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~------------~g--~-----~~--~~~~~~- 164 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQ------------EG--F-----NK--DSRKVV- 164 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEE------------TT--T-----TE--EHHHHH-
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccccc------------CC--C-----CC--CHHHHH-
Confidence 45899999999999999999 7 99999999999999886421100 00 0 00 233333
Q ss_pred HHHHHHHhc--CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHF--DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~--~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
..+.+.+ ++ .++++++|.++.. + ...+.+...+.+....+.||+||+|||..
T Consensus 165 --~~l~~~l~~~v--~~~~~~~v~~i~~--~-------------------~~~~~~~~~~~~~~~~~~~d~lvlAtGa~- 218 (493)
T 1y56_A 165 --EELVGKLNENT--KIYLETSALGVFD--K-------------------GEYFLVPVVRGDKLIEILAKRVVLATGAI- 218 (493)
T ss_dssp --HHHHHTCCTTE--EEETTEEECCCEE--C-------------------SSSEEEEEEETTEEEEEEESCEEECCCEE-
T ss_pred --HHHHHHHhcCC--EEEcCCEEEEEEc--C-------------------CcEEEEEEecCCeEEEEECCEEEECCCCC-
Confidence 3333333 43 5677888988876 3 23455544333323468999999999954
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
|+.|++| |.+. .| +++..++..... ......+++++|||+|.+|+| ..+.+.+ |.
T Consensus 219 --~~~~~~~---g~~~-~g-v~~~~~~~~~~~--~~~~~~~~~vvViGgG~~gle--~~l~~~G-------V~------- 273 (493)
T 1y56_A 219 --DSTMLFE---NNDM-PG-VFRRDFALEVMN--VWEVAPGRKVAVTGSKADEVI--QELERWG-------ID------- 273 (493)
T ss_dssp --ECCCCCT---TTTS-TT-EEEHHHHHHHHH--TSCBCSCSEEEEESTTHHHHH--HHHHHHT-------CE-------
T ss_pred --ccCCCCC---CCCC-CC-EEEcHHHHHHHH--hcccCCCCEEEEECCCHHHHH--HHHHhCC-------cE-------
Confidence 7888888 7652 33 444433321100 011246799999999999998 3333332 22
Q ss_pred eeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCcccccccc
Q 041145 247 WTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYAS 326 (522)
Q Consensus 247 ~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 326 (522)
T Consensus 274 -------------------------------------------------------------------------------- 273 (493)
T 1y56_A 274 -------------------------------------------------------------------------------- 273 (493)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCcchhhhcccCcEEEEeCc-eeEEecC----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCcc
Q 041145 327 CQMAILPENFFSEAEKGNILFKRAS-KWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSS 401 (522)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~ 401 (522)
++.+. +.++..+ .|.++||+++++|.||+|+|++++..+...+.. ++..++.
T Consensus 274 --------------------v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~---~~~~~~~ 330 (493)
T 1y56_A 274 --------------------YVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG---KLRFRRG 330 (493)
T ss_dssp --------------------EEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC---CEEEETT
T ss_pred --------------------EEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC---CccccCC
Confidence 22222 3333322 256788989999999999999998543321211 1111223
Q ss_pred cccc-cccccccCCCCceeEeecccccchhhHHHHHHHHHHHHhcCCCC
Q 041145 402 GIMP-LYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQKFK 449 (522)
Q Consensus 402 ~~~~-l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g~~~ 449 (522)
+.+. +...+. +.|+||++|..........|..|++.+|..+.+..-
T Consensus 331 g~i~~vd~~~~--s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 331 YYSPVLDEYHR--IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp EEEECCCTTSE--EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ceeeccccccC--cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHcC
Confidence 3333 343333 789999999888766677899999999998876543
No 93
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.85 E-value=2.2e-20 Score=190.56 Aligned_cols=290 Identities=16% Similarity=0.118 Sum_probs=167.4
Q ss_pred CcEEEECCCHHHHHHHHHh----CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL----RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
|+|||||||+||+++|.+| .+.+|+|||+++....... .+... ... .+.+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~---~~~v~----~g~----------------~~~~~~~ 59 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYM---SNEVI----GGD----------------RELASLR 59 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTT---HHHHH----HTS----------------SCGGGGE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccC---HHHHh----cCC----------------CCHHHHh
Confidence 5899999999999999998 4578999999864211000 00000 000 0000010
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.-++.+. +.++ .+ ...+|+.++. +. ..|++.++. ++.||+||+|||.
T Consensus 60 ~~~~~~~-~~gv--~~-i~~~v~~id~--~~---------------------~~v~~~~g~---~i~yd~LviAtG~--- 106 (401)
T 3vrd_B 60 VGYDGLR-AHGI--QV-VHDSALGIDP--DK---------------------KLVKTAGGA---EFAYDRCVVAPGI--- 106 (401)
T ss_dssp ECSHHHH-HTTC--EE-ECSCEEEEET--TT---------------------TEEEETTSC---EEECSEEEECCCE---
T ss_pred hCHHHHH-HCCC--EE-EEeEEEEEEc--cC---------------------cEEEecccc---eeecceeeeccCC---
Confidence 0111222 2343 22 3557888876 32 146666664 7999999999995
Q ss_pred CCCCCCCCCCCCccccCC-ceeeccccCCCchhh--hhhccCCCeEEEECCCCC-------HHHHHHHHH----HhcCCC
Q 041145 168 IPRMPAFPANKGEEIFGG-KVLHSMDYSKLDKEA--ATELLEGKKVAIIGYRKS-------AIDLAVECA----EANQGP 233 (522)
Q Consensus 168 ~p~~p~~p~~~G~~~f~g-~~~hs~~~~~~~~~~--~~~~~~~k~V~VIG~G~s-------g~dia~~l~----~~~~~~ 233 (522)
.++.|.+| |.++..+ ...|+....+..... ........+.+|+|+|.. +.|++.+++ ..+.
T Consensus 107 ~~~~~~i~---G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~-- 181 (401)
T 3vrd_B 107 DLLYDKIE---GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKS-- 181 (401)
T ss_dssp EECGGGSB---TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCT--
T ss_pred ccccCCcc---CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCC--
Confidence 47888888 8765432 222332211100000 011233344555554433 445555444 3443
Q ss_pred CCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhhhhhhHHHHHHHHHHHHhhcCCcccCC
Q 041145 234 NGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSILSPMRKAISKFIESYLVWKLPLVKFG 313 (522)
Q Consensus 234 ~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
..+|+++.+.+..... ..+...+.+
T Consensus 182 -~~~v~i~~~~~~~~~~------------------------------------------~~~~~~~~~------------ 206 (401)
T 3vrd_B 182 -KSKVIILDNSQTFSKQ------------------------------------------AQFTKGWER------------ 206 (401)
T ss_dssp -TCEEEEECSSSSCTTH------------------------------------------HHHHHHHHH------------
T ss_pred -CCEEEEEccccccccc------------------------------------------ccccHHHHH------------
Confidence 3568888776642100 000011111
Q ss_pred CCCCCccccccccccccccCcchhhhcccCcEEEEeCc-eeEEec----CcEEecCCceeeccEEEEeccCCCCcccccc
Q 041145 314 LKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRAS-KWWFWS----GGIEFEDKSKLEADVVLLATGYDGKKKLQSI 388 (522)
Q Consensus 314 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~-i~~~~~----~~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~ 388 (522)
.+...+++.+|+++.+. +..++. ..+.++||+++++|.|++|+|.+++..+..
T Consensus 207 ---------------------~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~- 264 (401)
T 3vrd_B 207 ---------------------LYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQS- 264 (401)
T ss_dssp ---------------------HSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHH-
T ss_pred ---------------------HHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhh-
Confidence 11133557788888876 555543 248899999999999999999998732211
Q ss_pred CCCcccccccCcccccccccc-cccCCCCceeEeeccccc----chhhHHHHHHHHHHHHhc
Q 041145 389 LPKPFSSLLADSSGIMPLYRG-TIHPLIPNMAFVGYIETV----SNLQIAEIRCKWLARLAD 445 (522)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~pni~~vG~~~~~----~~~~~ae~qa~~~a~~l~ 445 (522)
..+ .++.|.+.+..+ +.++++||||++|++.+. .+.+.|..||+.+|++|.
T Consensus 265 -----~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 265 -----ASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp -----TTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred -----ccc-cccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 112 245677788876 567899999999987542 235789999999998774
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.37 E-value=1.6e-13 Score=139.14 Aligned_cols=138 Identities=20% Similarity=0.301 Sum_probs=87.3
Q ss_pred cccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC-----C----ccC--cccc-cCCCCCcc----c--
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH-----C----SFN--STKL-QTPRCDFE----F-- 67 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~-----~----~~~--~~~~-~~~~~~~~----~-- 67 (522)
||+.+||+|||||++|+++|..| .|.+|+|||+++.+|+.|.. + ... ...+ ..+..... |
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 34467999999999999999999 89999999999888654421 0 000 0000 00110000 0
Q ss_pred ---------CCCCCCC-CCCCCCC--ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCC
Q 041145 68 ---------SDYPWPE-RDDASFP--SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLK 135 (522)
Q Consensus 68 ---------~~~~~~~-~~~~~~~--~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
.+.++.. .....|+ ...++.+++...+++.++ .++++++|+++....+..
T Consensus 81 ~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~~g~---------------- 142 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQNDE---------------- 142 (401)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECCSCS----------------
T ss_pred HHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEcccCcC----------------
Confidence 0111110 0112233 677888899888888888 799999999998621000
Q ss_pred CCCCEEEEEEeCCeeEEEEECEEEEeeeccCCCC
Q 041145 136 GHPVWEVAVETNQAIQWYGFELLVMCIGKFGDIP 169 (522)
Q Consensus 136 ~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p 169 (522)
.+.|.|++.++ ++.+|+||+|||.. +.|
T Consensus 143 -~~~~~v~~~~g----~i~ad~VVlAtG~~-s~p 170 (401)
T 2gqf_A 143 -KVRFVLQVNST----QWQCKNLIVATGGL-SMP 170 (401)
T ss_dssp -SCCEEEEETTE----EEEESEEEECCCCS-SCG
T ss_pred -CCeEEEEECCC----EEECCEEEECCCCc-cCC
Confidence 13476665332 68999999999987 434
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.27 E-value=1.3e-11 Score=110.56 Aligned_cols=99 Identities=16% Similarity=0.077 Sum_probs=66.6
Q ss_pred hhcccCcEEEEeCceeEEecC----cEEecCCceeeccEEEEeccCCCCccccccCCCcccccccCcccccccccccccC
Q 041145 338 SEAEKGNILFKRASKWWFWSG----GIEFEDKSKLEADVVLLATGYDGKKKLQSILPKPFSSLLADSSGIMPLYRGTIHP 413 (522)
Q Consensus 338 ~~l~~~~v~v~~~~i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 413 (522)
+.+++.+|+++.+.+.+++.+ .|.+++| ++++|.||+|||..++. ...+ ++..+ .+.+.+...+ .+
T Consensus 64 ~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~-----g~~~~-~g~i~vd~~~-~t 133 (180)
T 2ywl_A 64 AHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL--PSLL-----GLTRR-GAYIDTDEGG-RT 133 (180)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH--HHHH-----TCCEE-TTEECCCTTC-BC
T ss_pred HHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc--cccC-----CCCcc-CceEEeCCCC-Cc
Confidence 344455677777777777643 2667788 89999999999999752 1111 11112 3444444443 45
Q ss_pred CCCceeEeecccccc--hhhHHHHHHHHHHHHhcC
Q 041145 414 LIPNMAFVGYIETVS--NLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 414 ~~pni~~vG~~~~~~--~~~~ae~qa~~~a~~l~g 446 (522)
+.|+||++|...... ..+.|..|++.+|..+.+
T Consensus 134 ~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp SSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHH
Confidence 889999999877644 457889999999988854
No 96
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.15 E-value=1.2e-10 Score=117.82 Aligned_cols=134 Identities=11% Similarity=0.092 Sum_probs=87.5
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc------c----------------CcccccCCCC-
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS------F----------------NSTKLQTPRC- 63 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~------~----------------~~~~~~~~~~- 63 (522)
|+.+||+|||||++|+++|..| .|++|+|+|+.+.+|+...... . .+..+..+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 3357999999999999999999 8999999999987765332110 0 0000101110
Q ss_pred C-cccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-
Q 041145 64 D-FEFSDYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE- 141 (522)
Q Consensus 64 ~-~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (522)
. ..+......... .....+..+..+|.+.+++.++ .++++++|+++.. + ++.+.
T Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~--~-------------------~~~v~g 137 (397)
T 3cgv_A 82 RPIILQSEKAGNEV-GYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIK--E-------------------NGKVAG 137 (397)
T ss_dssp SCEEEC-----CCC-EEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEE--E-------------------TTEEEE
T ss_pred EEEEEeccccCCce-eEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEE--e-------------------CCEEEE
Confidence 0 111110000000 1235678888999888888887 7899999999987 3 24555
Q ss_pred EEEEeCCeeEEEEECEEEEeeeccC
Q 041145 142 VAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 142 v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
|++.+.++..++.+|.||.|+|..|
T Consensus 138 v~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 138 AKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEEEECCeEEEEEcCEEEECCCcch
Confidence 7776544445899999999999873
No 97
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.13 E-value=1.4e-10 Score=118.04 Aligned_cols=133 Identities=20% Similarity=0.297 Sum_probs=85.6
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC-----ccCcc-------cccCCCCCc----cc----
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC-----SFNST-------KLQTPRCDF----EF---- 67 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~-----~~~~~-------~~~~~~~~~----~~---- 67 (522)
..+||+|||||++|+++|..| .|.+|+|||+.+.+|+.+... .+... ....+.... .|
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 357999999999999999999 899999999999887654210 00000 000111100 00
Q ss_pred -------CCCCCCCCC-CCCC--CChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCC
Q 041145 68 -------SDYPWPERD-DASF--PSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGH 137 (522)
Q Consensus 68 -------~~~~~~~~~-~~~~--~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (522)
.+.++.... ...| ....++.+.+...+++.++ .++++++|+++.. + +
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~--~-------------------~ 162 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVER--T-------------------A 162 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEE--E-------------------T
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEE--e-------------------C
Confidence 001111000 0112 3456888889888888888 7999999999987 3 2
Q ss_pred CCEEEEEEeCCeeEEEEECEEEEeeeccCCCCC
Q 041145 138 PVWEVAVETNQAIQWYGFELLVMCIGKFGDIPR 170 (522)
Q Consensus 138 ~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p~ 170 (522)
+.|.|++.++ ++.+|.||+|||.. +.|.
T Consensus 163 ~~~~V~~~~g----~i~ad~VIlAtG~~-S~p~ 190 (417)
T 3v76_A 163 SGFRVTTSAG----TVDAASLVVASGGK-SIPK 190 (417)
T ss_dssp TEEEEEETTE----EEEESEEEECCCCS-SCGG
T ss_pred CEEEEEECCc----EEEeeEEEECCCCc-cCCC
Confidence 3466665443 79999999999988 4443
No 98
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.11 E-value=2.7e-10 Score=115.02 Aligned_cols=136 Identities=12% Similarity=0.081 Sum_probs=84.3
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccC--C----Cc----------------cCcccccCCCCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWK--H----CS----------------FNSTKLQTPRCD 64 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~--~----~~----------------~~~~~~~~~~~~ 64 (522)
|+++||+||||||+|+++|..| .|++|+||||++.+|.... . .. ..+.++..+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 6678999999999999999999 8999999999877653211 0 00 011111111110
Q ss_pred cccC-CCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE
Q 041145 65 FEFS-DYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA 143 (522)
Q Consensus 65 ~~~~-~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 143 (522)
.... ..+...........+..+...|...+.+.+. .++++++|+.+...++ ....+.
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~~~--------------------~~~~v~ 139 (397)
T 3oz2_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKENG--------------------KVAGAK 139 (397)
T ss_dssp SCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEETT--------------------EEEEEE
T ss_pred eEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeeccc--------------------eeeeee
Confidence 0000 0000000001125788888999888888887 7889999998876221 111233
Q ss_pred EEeCCeeEEEEECEEEEeeeccC
Q 041145 144 VETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 144 ~~~~~~~~~~~~d~vViAtG~~s 166 (522)
...+++..++.+|.||.|+|..|
T Consensus 140 ~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 140 IRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEETTEEEEEEEEEEEECCCTTC
T ss_pred ecccccceEEEEeEEEeCCcccc
Confidence 33333355789999999999874
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.11 E-value=3e-10 Score=101.59 Aligned_cols=106 Identities=25% Similarity=0.257 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
++|+|||||++|+.+|..| .|.+|+|+|+.+.. +.. . ..+..++.+ +......++.++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~----~------~~~~~~~~~-------~~~~~~~~~~~~ 61 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKG----V------SRVPNYPGL-------LDEPSGEELLRR 61 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTT----C------SCCCCSTTC-------TTCCCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccC----c------hhhhccCCC-------cCCCCHHHHHHH
Confidence 3899999999999999999 89999999998632 110 0 000011111 112457889999
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+.+.++++++ .+.++ +|++++. + .+.|.|++.++ ++.+|.||+|+|..
T Consensus 62 l~~~~~~~gv--~v~~~-~v~~i~~--~-------------------~~~~~v~~~~g----~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 62 LEAHARRYGA--EVRPG-VVKGVRD--M-------------------GGVFEVETEEG----VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHTTC--EEEEC-CCCEEEE--C-------------------SSSEEEECSSC----EEEEEEEEECCTTC
T ss_pred HHHHHHHcCC--EEEeC-EEEEEEE--c-------------------CCEEEEEECCC----EEEECEEEECCCCC
Confidence 9999999888 78888 9999987 3 23466766544 68999999999954
No 100
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.07 E-value=3.7e-10 Score=111.60 Aligned_cols=128 Identities=16% Similarity=0.273 Sum_probs=78.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCc-----------------------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDF----------------------- 65 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~----------------------- 65 (522)
.+||+|||||++|+++|..| .|++|+|||+.+.+||.+.........++.....+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 35999999999999999999 89999999999999987764222211111110000
Q ss_pred -----ccCCCCCC--CCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCC
Q 041145 66 -----EFSDYPWP--ERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHP 138 (522)
Q Consensus 66 -----~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (522)
.+.+..+. ......+.....+....+.+++ ++ .++++++|++++. + .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~--~-------------------~~ 136 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFR--G-------------------EE 136 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEE--C-------------------SS
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEE--e-------------------CC
Confidence 00000000 0000112222223334444444 55 6899999999987 3 34
Q ss_pred CEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 139 VWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 139 ~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.|.|++.++. ....+|+||+|+|..
T Consensus 137 ~~~v~~~~g~--~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 137 HWNLLDAEGQ--NHGPFSHVIIATPAP 161 (336)
T ss_dssp CEEEEETTSC--EEEEESEEEECSCHH
T ss_pred EEEEEeCCCc--CccccCEEEEcCCHH
Confidence 6888866553 233599999999987
No 101
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.06 E-value=7.7e-10 Score=117.12 Aligned_cols=132 Identities=17% Similarity=0.110 Sum_probs=85.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc--------------cC---cccccCCCC--------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS--------------FN---STKLQTPRC-------- 63 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~--------------~~---~~~~~~~~~-------- 63 (522)
.+||+|||||++|+++|..| .|++|+|||+.+.......... .+ .........
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 46999999999999999999 8999999999876541111000 00 000000000
Q ss_pred CcccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE
Q 041145 64 DFEFSDYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA 143 (522)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 143 (522)
.+.+...+..... ........+...|.+.+++.++ .++++++|++++. + .+.+.|+
T Consensus 129 ~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~--~-------------------~~~v~v~ 184 (570)
T 3fmw_A 129 GLDFGLVDTRHPY-TGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQ--D-------------------AEAVEVT 184 (570)
T ss_dssp CCBGGGSCCSCCS-BBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCB--C-------------------SSCEEEE
T ss_pred cccccccCCCCCe-eEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEE--c-------------------CCeEEEE
Confidence 1111111111111 2346788899999988888787 7889999999876 3 3457787
Q ss_pred EEeCCeeEEEEECEEEEeeeccC
Q 041145 144 VETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 144 ~~~~~~~~~~~~d~vViAtG~~s 166 (522)
+++.++.+++.+|+||.|+|..|
T Consensus 185 ~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 185 VAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEETTEEEEEEESEEEECSCSSC
T ss_pred EEeCCCcEEEEeCEEEEcCCCCc
Confidence 75444335799999999999884
No 102
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.06 E-value=2e-10 Score=113.96 Aligned_cols=127 Identities=20% Similarity=0.285 Sum_probs=82.9
Q ss_pred cEEEECCCHHHHHHHHHh-C----CCCcEEEccCCCCCcccCCCcc---CcccccCCCCCcccCC---------------
Q 041145 13 KIGIIGAGISGIATAKQL-R----HYDPLVFEATNSIGGVWKHCSF---NSTKLQTPRCDFEFSD--------------- 69 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l-~----g~~v~v~e~~~~~GG~w~~~~~---~~~~~~~~~~~~~~~~--------------- 69 (522)
||+|||||++|+++|..| . |++|+|||+++.+||.|..... ....++.....+....
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 899999999999999999 4 7899999999999997764221 2222222211111000
Q ss_pred ----CCCCCC--------CCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCC
Q 041145 70 ----YPWPER--------DDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGH 137 (522)
Q Consensus 70 ----~~~~~~--------~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (522)
.++... ....|.....+..+.+.++++.+. .++++++|++++. + .
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~--~-------------------~ 139 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINL--R-------------------D 139 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEE--C-------------------S
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEE--c-------------------C
Confidence 011100 001122233345566666666665 7999999999988 3 3
Q ss_pred CCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 138 PVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 138 ~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++|.|++.+++ ++.||.||+|+...
T Consensus 140 ~~~~v~~~~g~---~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 140 DKWEVSKQTGS---PEQFDLIVLTMPVP 164 (342)
T ss_dssp SSEEEEESSSC---CEEESEEEECSCHH
T ss_pred CEEEEEECCCC---EEEcCEEEECCCHH
Confidence 56888876664 57999999999853
No 103
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.04 E-value=9.7e-10 Score=114.67 Aligned_cols=133 Identities=17% Similarity=0.141 Sum_probs=87.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC--------------ccCcccccCCCCCcccCCCC---
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC--------------SFNSTKLQTPRCDFEFSDYP--- 71 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~~~~~~~~~~~~~~~~~~--- 71 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.++..-... ..+.+.-..+.....|....
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 67999999999999999999 899999999987664211100 00000000011111111100
Q ss_pred --CCCCCC-CCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC
Q 041145 72 --WPERDD-ASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ 148 (522)
Q Consensus 72 --~~~~~~-~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 148 (522)
...... ....++..+...|.+.+++.++ .++++++|++++. + .+.++|++++++
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~--~-------------------~~~v~v~~~~~~ 147 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTD--D-------------------GAGVTVEVRGPE 147 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEE--E-------------------TTEEEEEEEETT
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEE--c-------------------CCeEEEEEEcCC
Confidence 000000 1234577888999998888887 7999999999987 3 235778887765
Q ss_pred eeEEEEECEEEEeeeccC
Q 041145 149 AIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 149 ~~~~~~~d~vViAtG~~s 166 (522)
+.+++++|+||.|+|.+|
T Consensus 148 g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 148 GKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEEEESEEEECCCTTC
T ss_pred CCEEEEeCEEEECCCcch
Confidence 555799999999999884
No 104
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.03 E-value=3e-10 Score=115.61 Aligned_cols=132 Identities=23% Similarity=0.246 Sum_probs=81.3
Q ss_pred ccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcc------cCC--------CccCccc-ccCCCCCcccCC
Q 041145 7 HVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGV------WKH--------CSFNSTK-LQTPRCDFEFSD 69 (522)
Q Consensus 7 ~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~------w~~--------~~~~~~~-~~~~~~~~~~~~ 69 (522)
+.++.+||+|||||++|+++|..| .|++|+|||+.+.++.. +.. ..++.+. ...+...+.+.+
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 334567999999999999999999 89999999998765311 000 0000000 000111111110
Q ss_pred ---------CCCCC-----CCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCC
Q 041145 70 ---------YPWPE-----RDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLK 135 (522)
Q Consensus 70 ---------~~~~~-----~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
++... .......++..+..+|.+.+.+ . .++++++|++++. +
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~--~------------------ 154 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEE--D------------------ 154 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEE--E------------------
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEe--c------------------
Confidence 00000 0002235677888888887765 3 7899999999987 3
Q ss_pred CCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 136 GHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 136 ~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
.+.+.|++.+++ ++.+|.||.|+|.+|
T Consensus 155 -~~~v~v~~~~g~---~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 155 -ADGVTVWFTDGS---SASGDLLIAADGSHS 181 (407)
T ss_dssp -TTEEEEEETTSC---EEEESEEEECCCTTC
T ss_pred -CCcEEEEEcCCC---EEeeCEEEECCCcCh
Confidence 345777776664 799999999999884
No 105
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.1e-11 Score=122.43 Aligned_cols=148 Identities=13% Similarity=0.105 Sum_probs=91.2
Q ss_pred CCcEEEECCCHHHHHHHHHh----CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL----RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.+||+|||||||||+||.+| .|++|+|||+.+.+||.... .+..+ ++. .+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~---~~~~~--~~~---------------------~l 118 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL---GGQLF--SAM---------------------VM 118 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC---CSTTC--CCE---------------------EE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe---CCccC--CHH---------------------HH
Confidence 45999999999999999999 49999999999999987643 11110 000 00
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
......+.+++++ .+..+. . .....+.++++++..
T Consensus 119 ~~~~~~~~~e~Gv--~~~~~~---------------------------------------~---~~~~~~~~~~~~~~~- 153 (326)
T 3fpz_A 119 RKPAHLFLQELEI--PYEDEG---------------------------------------D---YVVVKHAALFISTVL- 153 (326)
T ss_dssp ETTTHHHHHHTTC--CCEECS---------------------------------------S---EEEESCHHHHHHHHH-
T ss_pred HHHHHHHHHHcCC--EEEECC---------------------------------------c---ceecceeEEEEcchh-
Confidence 0111223344554 221110 0 022334455566643
Q ss_pred CCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 167 DIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 167 ~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
++.+.+| |.+.+.+.-.......+ .....+++++|||+|.+++|.|..+...+. ++++..+..
T Consensus 154 --~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viggg~~av~~a~~~~~~~~-----~v~i~~~~~ 216 (326)
T 3fpz_A 154 --SKVLQLP---NVKLFNATCVEDLVTRP------PTEKGEVTVAGVVTNWTLVTQAHGTQCAMD-----PNVIELAGY 216 (326)
T ss_dssp --HHHHTST---TEEEETTEEEEEEEEES------SCSSSSCEEEEEEEEEHHHHTCTTSSSCCC-----CEEEEESCB
T ss_pred --hhccccc---cceeecccccceeeccC------CcccCCCEEEEEccCceeeehhhhhhhccC-----cEEEEeecc
Confidence 5566677 87776664433322222 234678999999999999999887776654 488876654
No 106
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.01 E-value=1.3e-09 Score=101.75 Aligned_cols=118 Identities=16% Similarity=0.046 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcc-cCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFE-FSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.+||+|||||++|+++|..| .|.+|+|||+.....|.|. .|...-.....++. +.+ . .-+.+.++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~---~~~~~~~~~~~~~~~~~d-----~---~g~~~~~~~ 71 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF---LPPKPPFPPGSLLERAYD-----P---KDERVWAFH 71 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS---SCCCSCCCTTCHHHHHCC-----T---TCCCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc---CccccccchhhHHhhhcc-----C---CCCCHHHHH
Confidence 57999999999999999999 8999999999844334332 22110000000000 000 0 011567888
Q ss_pred HHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 88 DYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 88 ~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.++.+.+++. ++ .+. +++|+++...+ ...+.|.+.++. ++.+|.||+|+|.+
T Consensus 72 ~~l~~~~~~~~gv--~i~-~~~v~~i~~~~--------------------~~v~~v~~~~g~---~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 72 ARAKYLLEGLRPL--HLF-QATATGLLLEG--------------------NRVVGVRTWEGP---PARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHTCTTE--EEE-ECCEEEEEEET--------------------TEEEEEEETTSC---CEECSEEEECCTTC
T ss_pred HHHHHHHHcCCCc--EEE-EeEEEEEEEeC--------------------CEEEEEEECCCC---EEECCEEEECCCCC
Confidence 8888888886 66 454 67899987621 122446554443 68999999999976
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.00 E-value=6.9e-10 Score=111.77 Aligned_cols=135 Identities=17% Similarity=0.136 Sum_probs=81.7
Q ss_pred CcccccccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCcc-C-------ccc-------ccCCCC
Q 041145 1 MASAQNHVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSF-N-------STK-------LQTPRC 63 (522)
Q Consensus 1 m~~~~~~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~-~-------~~~-------~~~~~~ 63 (522)
|.......|+.++|+|||||++|+++|..| .|++|+|||+.+.+++.-..... + .+. ...+..
T Consensus 1 m~~~~~~~m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~ 80 (379)
T 3alj_A 1 MANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPP 80 (379)
T ss_dssp ----------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCS
T ss_pred CCCccCCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCcc
Confidence 444444445567999999999999999999 89999999998776531110000 0 000 000111
Q ss_pred CcccCC-------CCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCC
Q 041145 64 DFEFSD-------YPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKG 136 (522)
Q Consensus 64 ~~~~~~-------~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 136 (522)
.+.+.+ ++.+ .......++.++..+|.+.+++.++ .++++++|++++. +
T Consensus 81 ~~~~~~~g~~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~--~------------------- 136 (379)
T 3alj_A 81 TYETWMHNKSVSKETFN-GLPWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP--V------------------- 136 (379)
T ss_dssp CEEEEETTEEEEEECGG-GCCEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET--T-------------------
T ss_pred ceEEEeCCceeeeccCC-CCceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe--C-------------------
Confidence 111100 0100 0101235678889999888888777 7899999999875 2
Q ss_pred CCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 137 HPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 137 ~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+ .|++.+++ ++.+|.||.|+|..
T Consensus 137 -~--~v~~~~g~---~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 137 -G--RLTLQTGE---VLEADLIVGADGVG 159 (379)
T ss_dssp -T--EEEETTSC---EEECSEEEECCCTT
T ss_pred -C--EEEECCCC---EEEcCEEEECCCcc
Confidence 2 57766554 79999999999977
No 108
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.99 E-value=1.7e-09 Score=112.89 Aligned_cols=133 Identities=16% Similarity=0.118 Sum_probs=87.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC--------------ccCcccccCCCCCcccCCCC---
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC--------------SFNSTKLQTPRCDFEFSDYP--- 71 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~~~~~~~~~~~~~~~~~~--- 71 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.++...... ..+.+.-..+.....+....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 56999999999999999999 899999999987654221100 00000000000111111100
Q ss_pred --CCCCCC-CCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC
Q 041145 72 --WPERDD-ASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ 148 (522)
Q Consensus 72 --~~~~~~-~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 148 (522)
...... ....++..+...|.+.+++.++ .++++++|++++. + .+.++|++.+++
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~--~-------------------~~~v~v~~~~~~ 148 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTD--E-------------------GDHVVVEVEGPD 148 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEE--C-------------------SSCEEEEEECSS
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEE--e-------------------CCEEEEEEEcCC
Confidence 000010 1234678889999988888887 7999999999987 4 235778887764
Q ss_pred eeEEEEECEEEEeeeccC
Q 041145 149 AIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 149 ~~~~~~~d~vViAtG~~s 166 (522)
+.+++.+|+||.|+|.+|
T Consensus 149 g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 149 GPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp CEEEEEEEEEEECCCTTC
T ss_pred CcEEEEeCEEEEccCccc
Confidence 445799999999999985
No 109
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.98 E-value=1.7e-09 Score=114.16 Aligned_cols=136 Identities=17% Similarity=0.118 Sum_probs=87.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc----------------------cC--cc------cc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS----------------------FN--ST------KL 58 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~----------------------~~--~~------~~ 58 (522)
..+|+|||||++|+++|..| .|++|+|||+.+.++..-.... .+ .. .+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 45999999999999999999 8999999999876532111000 00 00 00
Q ss_pred cCC--CCCc----ccCC----CC-CCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCc
Q 041145 59 QTP--RCDF----EFSD----YP-WPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTA 127 (522)
Q Consensus 59 ~~~--~~~~----~~~~----~~-~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~ 127 (522)
... .... .+.. .. ..+.. ....++..+..+|.+.+++.++ .++++++|++++..++..
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~~~~-------- 153 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAG-WAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQHDDDA-------- 153 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCC-CBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEECGGG--------
T ss_pred eccCCceeeeccccccccccccccCCCCc-ccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEECCCCc--------
Confidence 000 0000 0000 00 00000 2346788999999999988887 799999999998732100
Q ss_pred cccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 128 GEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 128 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
...+.+++.++++..++.+|+||.|+|.+|
T Consensus 154 ---------~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 154 ---------GAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ---------CSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ---------cccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 116778887765456899999999999884
No 110
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.98 E-value=2.3e-09 Score=109.37 Aligned_cols=133 Identities=16% Similarity=0.103 Sum_probs=84.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC----CCcccCCCccC--------------------cccccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS----IGGVWKHCSFN--------------------STKLQTPRCD 64 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~----~GG~w~~~~~~--------------------~~~~~~~~~~ 64 (522)
.+||+|||||++|+++|..| .|++|+|+|+.+. .|........+ +.........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 35999999999999999999 8999999999863 23221110100 0000000000
Q ss_pred --cccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEE
Q 041145 65 --FEFSDYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEV 142 (522)
Q Consensus 65 --~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 142 (522)
+.+...............+..+...|.+.+++.++ .++++++|++++. + .+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v 141 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKF--F-------------------GTDSVT 141 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEE--E-------------------TTEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEE--e-------------------CCEEEE
Confidence 01111000000001236788899999988888887 7999999999987 3 234556
Q ss_pred EEEeCCe-eEEEEECEEEEeeeccC
Q 041145 143 AVETNQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 143 ~~~~~~~-~~~~~~d~vViAtG~~s 166 (522)
.+...++ ..++.+|.||.|+|..|
T Consensus 142 ~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 142 TIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEETTSCEEEEEEEEEEECCGGGC
T ss_pred EEEcCCCCEEEEEcCEEEECCCCch
Confidence 6654433 34699999999999873
No 111
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.98 E-value=3e-09 Score=112.85 Aligned_cols=138 Identities=15% Similarity=0.084 Sum_probs=87.3
Q ss_pred ccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccC------------------------cccc--
Q 041145 7 HVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFN------------------------STKL-- 58 (522)
Q Consensus 7 ~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~------------------------~~~~-- 58 (522)
.+|+.+||+|||||++|+++|..| .|++|+|+|+.+..+........| +...
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 346678999999999999999999 899999999985432110000000 0000
Q ss_pred cCCCC--CcccCCCCCCCCC--CCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCC
Q 041145 59 QTPRC--DFEFSDYPWPERD--DASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLL 134 (522)
Q Consensus 59 ~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 134 (522)
..... .+.|......... ......+..+..+|...+++.++ .+.++++|+++.. +.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~--~~---------------- 158 (591)
T 3i3l_A 99 GQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDL--SD---------------- 158 (591)
T ss_dssp SSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEC--CS----------------
T ss_pred cCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEE--cC----------------
Confidence 00000 0111111000000 01235778899999998988887 7889999999986 21
Q ss_pred CCCCCEEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 135 KGHPVWEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 135 ~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
...+.|++.+++...++.+|.||.|+|..|
T Consensus 159 --g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 159 --PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp --TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred --CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 346788887533345799999999999874
No 112
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.95 E-value=3.2e-09 Score=111.24 Aligned_cols=133 Identities=17% Similarity=0.128 Sum_probs=82.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC----CCCcccCCCccC----cccc-------cCCC-C---------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN----SIGGVWKHCSFN----STKL-------QTPR-C--------- 63 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~----~~GG~w~~~~~~----~~~~-------~~~~-~--------- 63 (522)
.+||+|||||++|+++|..| .|++|+|||+.+ ..|..+..+... .+.+ ..+. .
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 46999999999999999999 899999999986 233222110000 0000 0000 0
Q ss_pred ----CcccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCC
Q 041145 64 ----DFEFSDYPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPV 139 (522)
Q Consensus 64 ----~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (522)
.+.+...+..........++..+..+|.+.+++.++ .++++++|+++.. + .+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~--~-------------------~~~ 143 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLF--E-------------------GER 143 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEE--E-------------------TTE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEE--E-------------------CCE
Confidence 001111111111101236788899999998988887 7899999999987 2 122
Q ss_pred E-EEEEEeCCe-eEEEEECEEEEeeeccC
Q 041145 140 W-EVAVETNQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 140 ~-~v~~~~~~~-~~~~~~d~vViAtG~~s 166 (522)
. .|++...++ ..++.+|.||.|+|..|
T Consensus 144 v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 144 AVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred EEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 2 255554333 35799999999999873
No 113
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.94 E-value=8e-10 Score=115.22 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=84.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcc-cccCCCCCcc-cCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNST-KLQTPRCDFE-FSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.+|+....+..+.. .......... ...+... . -...+..++
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--~-~~~~~~~~l 168 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTG--T-LDHISIRQL 168 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCT--T-CCEEEHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccccc--c-cccCCHHHH
Confidence 56999999999999999999 89999999999887753211111100 0000000000 0001100 0 112456788
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-Ce-eEEEEECEEEEeeec
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-QA-IQWYGFELLVMCIGK 164 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vViAtG~ 164 (522)
..+|.+.+++.++ .++++++|+++.... .+ ...|.|++++. ++ ..++.+|+||+|+|.
T Consensus 169 ~~~L~~~~~~~gv--~v~~~~~v~~i~~~~-~~-----------------~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 169 QLLLLKVALLLGV--EIHWGVKFTGLQPPP-RK-----------------GSGWRAQLQPNPPAQLASYEFDVLISAAGG 228 (497)
T ss_dssp HHHHHHHHHHTTC--EEEESCEEEEEECCC-ST-----------------TCCBEEEEESCCCHHHHTCCBSEEEECCCT
T ss_pred HHHHHHHHHhCCC--EEEeCCEEEEEEEec-CC-----------------CCEEEEEEEECCCCCEEEEEcCEEEECCCC
Confidence 8999888888887 799999999998621 11 24578887532 22 235889999999997
Q ss_pred c
Q 041145 165 F 165 (522)
Q Consensus 165 ~ 165 (522)
.
T Consensus 229 ~ 229 (497)
T 2bry_A 229 K 229 (497)
T ss_dssp T
T ss_pred C
Confidence 7
No 114
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.93 E-value=2.9e-09 Score=107.94 Aligned_cols=128 Identities=21% Similarity=0.277 Sum_probs=80.1
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC-----CcccCCCccCccc------c-------cCCCCCcccCC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI-----GGVWKHCSFNSTK------L-------QTPRCDFEFSD 69 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~-----GG~w~~~~~~~~~------~-------~~~~~~~~~~~ 69 (522)
..++|+|||||++|+++|..| .|++|+|||+.+.+ |+.|......+.. + ..+... .+.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 357999999999999999999 89999999998754 3333210000000 0 000000 0000
Q ss_pred --------C--CCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCC
Q 041145 70 --------Y--PWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPV 139 (522)
Q Consensus 70 --------~--~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (522)
. +...........+..+.++|.+.++. ..++++++|++++. + .+.
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~--~-------------------~~~ 158 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN----DTVIWDRKLVMLEP--G-------------------KKK 158 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT----TSEEESCCEEEEEE--C-------------------SSS
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC----CEEEECCEEEEEEE--C-------------------CCE
Confidence 0 10000001234667777777665442 26899999999987 3 346
Q ss_pred EEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 140 WEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 140 ~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
|.|++.++. ++.+|.||.|+|.+|
T Consensus 159 v~v~~~~g~---~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 159 WTLTFENKP---SETADLVILANGGMS 182 (398)
T ss_dssp EEEEETTSC---CEEESEEEECSCTTC
T ss_pred EEEEECCCc---EEecCEEEECCCcch
Confidence 788876664 689999999999884
No 115
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.91 E-value=1.8e-09 Score=113.99 Aligned_cols=167 Identities=14% Similarity=0.121 Sum_probs=95.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC-CCCcccCCCccCcccccC----------CCCC---------cccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN-SIGGVWKHCSFNSTKLQT----------PRCD---------FEFS 68 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~~~~----------~~~~---------~~~~ 68 (522)
.+||+|||||++|++||..| .|.+|+|+|++. .+|... +.|...... .... ..|.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~---Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS---CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS---SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc---ccccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 47999999999999999999 899999999974 344211 111111000 0000 0010
Q ss_pred CCCCCCC---C-CCCCCChHHHHHHHHHHHHh-cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE
Q 041145 69 DYPWPER---D-DASFPSHVELLDYLHGYAVH-FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA 143 (522)
Q Consensus 69 ~~~~~~~---~-~~~~~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 143 (522)
....... . ......+..+...+...+++ .++ .+ ++++|+.+.. +. ...+.|.
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~--e~------------------g~V~GV~ 161 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIV--EN------------------DRVVGAV 161 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEE--SS------------------SBEEEEE
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEe--cC------------------CEEEEEE
Confidence 0000000 0 00123456777888888877 466 45 6789999876 31 1223455
Q ss_pred EEeCCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHH
Q 041145 144 VETNQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLA 223 (522)
Q Consensus 144 ~~~~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia 223 (522)
+.++ .++.+|.||+|||.+ +..+.++ |...+. +.+ +| |.+|++++
T Consensus 162 t~dG---~~I~Ad~VVLATGt~---s~~~~i~---G~~~~~----------------------~gr---iG-g~~a~eLA 206 (651)
T 3ces_A 162 TQMG---LKFRAKAVVLTVGTF---LDGKIHI---GLDNYS----------------------GGR---AG-DPPSIPLS 206 (651)
T ss_dssp ETTS---EEEEEEEEEECCSTT---TCCEEEC---C---------------------------------------CCHHH
T ss_pred ECCC---CEEECCEEEEcCCCC---ccCcccc---CcccCC----------------------CCC---cc-chhhhHHH
Confidence 5444 379999999999966 4555566 654321 123 56 78899999
Q ss_pred HHHHHhcCCCCCCcEEEEee
Q 041145 224 VECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 224 ~~l~~~~~~~~~~~Vt~v~R 243 (522)
..|.+.+.. |+.+..
T Consensus 207 ~~L~~lG~~-----v~~~~t 221 (651)
T 3ces_A 207 RRLRELPLR-----VGRLKT 221 (651)
T ss_dssp HHHHTTTCC-----EEEECC
T ss_pred HHHHhcCCe-----EEEecC
Confidence 999988654 888753
No 116
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.89 E-value=9.7e-09 Score=104.47 Aligned_cols=134 Identities=19% Similarity=0.122 Sum_probs=81.9
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCC-cEEEccCCCCCcccCCC-ccCc-------ccc-------cCCCCCcccCC-
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYD-PLVFEATNSIGGVWKHC-SFNS-------TKL-------QTPRCDFEFSD- 69 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~-v~v~e~~~~~GG~w~~~-~~~~-------~~~-------~~~~~~~~~~~- 69 (522)
|..++|+|||||++|+++|..| .|++ |+|||+.+.++...... ..+. +.+ ..+...+.+.+
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 4456999999999999999999 8999 99999987654321110 0000 000 00000011100
Q ss_pred -------CCCC----CCCCCCCCChHHHHHHHHHHHHh-cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCC
Q 041145 70 -------YPWP----ERDDASFPSHVELLDYLHGYAVH-FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGH 137 (522)
Q Consensus 70 -------~~~~----~~~~~~~~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (522)
.+.. .........+.++..+|.+.+.+ .+. ..++++++|++++. +
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~-~~v~~~~~v~~i~~-~--------------------- 138 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQ-QAVRTGLGVERIEE-R--------------------- 138 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCT-TSEEESEEEEEEEE-E---------------------
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCC-cEEEECCEEEEEec-C---------------------
Confidence 0000 00001234677888888877765 342 16899999999986 2
Q ss_pred CCEEEEEEe---CCeeEEEEECEEEEeeeccC
Q 041145 138 PVWEVAVET---NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 138 ~~~~v~~~~---~~~~~~~~~d~vViAtG~~s 166 (522)
+.+.|++.+ ++ ..++.+|.||.|+|.+|
T Consensus 139 ~~v~v~~~~~~~g~-~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 139 DGRVLIGARDGHGK-PQALGADVLVGADGIHS 169 (410)
T ss_dssp TTEEEEEEEETTSC-EEEEEESEEEECCCTTC
T ss_pred CccEEEEecCCCCC-ceEEecCEEEECCCccc
Confidence 246777766 32 34789999999999884
No 117
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.88 E-value=2.4e-09 Score=110.24 Aligned_cols=129 Identities=20% Similarity=0.253 Sum_probs=82.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC-----CccCcc------cccCCC--CC-----cccC--
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH-----CSFNST------KLQTPR--CD-----FEFS-- 68 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~-----~~~~~~------~~~~~~--~~-----~~~~-- 68 (522)
.+||+|||||++|+++|..| .|.+|+|+|+.+.+|+.... +.+... .-..+. .. ..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 46999999999999999999 89999999999877753211 000000 000000 00 0000
Q ss_pred ---------CCCCCCC-CCCCCC---ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCC
Q 041145 69 ---------DYPWPER-DDASFP---SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLK 135 (522)
Q Consensus 69 ---------~~~~~~~-~~~~~~---~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
+.++... ....|+ ....+.+.|...+++.++ .++++++|+++.. +
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~--~------------------ 163 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEY--E------------------ 163 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEE--E------------------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEe--c------------------
Confidence 1111000 001122 457788888888888887 7899999999986 2
Q ss_pred CCCC-EEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 136 GHPV-WEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 136 ~~~~-~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+++ |.|++.++. ++.+|.||+|||..
T Consensus 164 -~~~v~~V~~~~G~---~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 164 -NGQTKAVILQTGE---VLETNHVVIAVGGK 190 (447)
T ss_dssp -TTEEEEEEETTCC---EEECSCEEECCCCS
T ss_pred -CCcEEEEEECCCC---EEECCEEEECCCCC
Confidence 223 677776553 68999999999988
No 118
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.88 E-value=3.8e-09 Score=107.04 Aligned_cols=129 Identities=14% Similarity=0.017 Sum_probs=81.6
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc--------------cCc----------ccccCCCC--
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS--------------FNS----------TKLQTPRC-- 63 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~--------------~~~----------~~~~~~~~-- 63 (522)
+||+|||||++|+++|..| .|++|+|||+.+.+...-.... ++. ..+.....
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 5899999999999999999 8999999999865511000000 000 00000000
Q ss_pred CcccCCCCCCCCCCCCCCChHHHHHHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCE--
Q 041145 64 DFEFSDYPWPERDDASFPSHVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVW-- 140 (522)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 140 (522)
...+...............+.++.+.|.+.+++. ++ .++++++|++++. + .+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~--~-------------------~~~v~g 143 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQR--D-------------------ERHAID 143 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEE--C-------------------TTSCEE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEE--c-------------------CCceEE
Confidence 0011100000000012367788899998888877 66 7889999999987 3 2356
Q ss_pred EEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 141 EVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 141 ~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
.|++.+++ ++.+|.||.|+|.+|
T Consensus 144 ~v~~~~g~---~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 144 QVRLNDGR---VLRPRVVVGADGIAS 166 (399)
T ss_dssp EEEETTSC---EEEEEEEEECCCTTC
T ss_pred EEEECCCC---EEECCEEEECCCCCh
Confidence 67776554 789999999999874
No 119
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.88 E-value=4.4e-09 Score=98.14 Aligned_cols=108 Identities=13% Similarity=-0.040 Sum_probs=64.4
Q ss_pred hhhhccc-CcEEEEeCceeEEec--C---cEEecCCceeeccEEEEeccCCCCcccccc--------CC----Ccccc--
Q 041145 336 FFSEAEK-GNILFKRASKWWFWS--G---GIEFEDKSKLEADVVLLATGYDGKKKLQSI--------LP----KPFSS-- 395 (522)
Q Consensus 336 ~~~~l~~-~~v~v~~~~i~~~~~--~---~v~~~dG~~~~~D~VI~ATG~~~~~~l~~~--------~~----~~~~~-- 395 (522)
+.+.+++ ++++++...+.++.. + +|.+.+|+++++|.||+|||...+.....- .. ..+.+
T Consensus 74 l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l 153 (232)
T 2cul_A 74 AKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDL 153 (232)
T ss_dssp HHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHH
T ss_pred HHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHH
Confidence 3344555 478888666777653 2 377788988999999999999655321000 00 00000
Q ss_pred -----------------------------cccCcccccccccccccCCCCceeEeecccccchhhHHHHHHHHHHHHhcC
Q 041145 396 -----------------------------LLADSSGIMPLYRGTIHPLIPNMAFVGYIETVSNLQIAEIRCKWLARLADQ 446 (522)
Q Consensus 396 -----------------------------~~~~~~~~~~l~~~~~~~~~pni~~vG~~~~~~~~~~ae~qa~~~a~~l~g 446 (522)
+... .+.... +..+++|+||++|.......+..+-.|++.+|..|..
T Consensus 154 ~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~-~~~~~~---~~~t~~p~iya~G~~a~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 154 SRLGFRFVEREGEVPETPSTPGYRVRYLAFHPE-EWEEKT---FRLKRLEGLYAVGLCVREGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp HHTTCCEEEEEEEEC-----CCEEEEEEEECGG-GEETTT---TEETTSBSEEECGGGTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhCCCeEEccccccCcCCCCCCccCchhhcccC-CCCCcc---ccccccccceeeeecccCccHHHHHHHHHHHHHHHHh
Confidence 0000 000001 1124789999999877333577888999999998854
Q ss_pred C
Q 041145 447 K 447 (522)
Q Consensus 447 ~ 447 (522)
.
T Consensus 230 ~ 230 (232)
T 2cul_A 230 E 230 (232)
T ss_dssp H
T ss_pred h
Confidence 3
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.87 E-value=5.5e-09 Score=109.29 Aligned_cols=130 Identities=15% Similarity=0.303 Sum_probs=80.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC-------cccCCCcc-C---------cccccCCCCCcc-----
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG-------GVWKHCSF-N---------STKLQTPRCDFE----- 66 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G-------G~w~~~~~-~---------~~~~~~~~~~~~----- 66 (522)
.+||+|||||++|+++|..| .|++|+|||+.+.++ +.|..... + +....+...++.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 46999999999999999999 899999999987662 33432100 0 000000000000
Q ss_pred ----------cCCCCCCCC--C-CCCCC---ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCcccc
Q 041145 67 ----------FSDYPWPER--D-DASFP---SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEY 130 (522)
Q Consensus 67 ----------~~~~~~~~~--~-~~~~~---~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 130 (522)
|..+..+.. . ..... ...++...+.+.+++.++ .++++++|+++.. +.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~--~~------------ 250 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHM--ED------------ 250 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEE--SS------------
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEE--eC------------
Confidence 000111100 0 00111 135677778888888887 7999999999987 31
Q ss_pred CCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 131 GSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 131 ~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
...+.|++.+++ ++.+|.||+|+|..
T Consensus 251 ------~~v~gV~l~~G~---~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 251 ------GQITGVTLSNGE---EIKSRHVVLAVGHS 276 (549)
T ss_dssp ------SBEEEEEETTSC---EEECSCEEECCCTT
T ss_pred ------CEEEEEEECCCC---EEECCEEEECCCCC
Confidence 223457776654 79999999999976
No 121
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.85 E-value=3.7e-09 Score=106.96 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=80.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC--------CcccCCC--------ccCccc-ccCCCCCcccCC--
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI--------GGVWKHC--------SFNSTK-LQTPRCDFEFSD-- 69 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~--------GG~w~~~--------~~~~~~-~~~~~~~~~~~~-- 69 (522)
.+||+|||||++|+++|..| .|++|+|||+.+.. |+.+... ..+.+. ...+...+.+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 46999999999999999999 89999999997642 1111100 000000 000000010100
Q ss_pred ----CCCC---CCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEE
Q 041145 70 ----YPWP---ERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEV 142 (522)
Q Consensus 70 ----~~~~---~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 142 (522)
+.++ ...........++...|...+.+.++ .++++++|+++.. ++ .+.+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~--~~------------------~~~~~v 139 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHD--LQ------------------GERPYV 139 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEC--TT------------------SSSCEE
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEE--ec------------------CCceEE
Confidence 0000 00001223567777788777777776 7999999999986 21 235678
Q ss_pred EEEeCCeeEEEEECEEEEeeeccC
Q 041145 143 AVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 143 ~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
++.+++...++.+|.||.|+|.+|
T Consensus 140 ~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 140 TFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp EEEETTEEEEEECSEEEECCCTTC
T ss_pred EEecCCcEEEEEeCEEEECCCCCc
Confidence 773332233689999999999884
No 122
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.83 E-value=2.2e-08 Score=106.38 Aligned_cols=134 Identities=16% Similarity=0.138 Sum_probs=83.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--C------CCCcEEEccCCCCCcccCCC-c-c--------Cccc-----cc--------
Q 041145 11 SSKIGIIGAGISGIATAKQL--R------HYDPLVFEATNSIGGVWKHC-S-F--------NSTK-----LQ-------- 59 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~------g~~v~v~e~~~~~GG~w~~~-~-~--------~~~~-----~~-------- 59 (522)
.+||+|||||++|+++|..| . |++|+|||+.+.+|+..... . . +... +.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999 6 99999999998877542110 0 0 0000 00
Q ss_pred ---CCCCCcccCCCCC--CCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCC
Q 041145 60 ---TPRCDFEFSDYPW--PERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLL 134 (522)
Q Consensus 60 ---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 134 (522)
.......++..|. .........++.++..+|.+.+++.++ .++++++|+++.. ++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~--~~---------------- 174 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILF--HE---------------- 174 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEE--CT----------------
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEE--cC----------------
Confidence 0000011110110 000002235778899999998988887 7999999999987 32
Q ss_pred CCCCCE-EEEEEe----CCe--------eEEEEECEEEEeeeccC
Q 041145 135 KGHPVW-EVAVET----NQA--------IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 135 ~~~~~~-~v~~~~----~~~--------~~~~~~d~vViAtG~~s 166 (522)
++.. .|++.+ .++ ..++.+|+||+|+|.+|
T Consensus 175 --~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 175 --DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp --TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred --CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 1222 255542 111 13799999999999874
No 123
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.83 E-value=9.3e-09 Score=106.03 Aligned_cols=131 Identities=15% Similarity=0.017 Sum_probs=82.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC--CcccCCC-----ccCcccccCCC---------CCcccCC---
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI--GGVWKHC-----SFNSTKLQTPR---------CDFEFSD--- 69 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~--GG~w~~~-----~~~~~~~~~~~---------~~~~~~~--- 69 (522)
.+||+|||||++|+++|..| .|++|+|||+.+.. |+.+... .+..+.+..+. ....+..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 46999999999999999999 89999999998753 3322210 01111110000 0000000
Q ss_pred --CCCCCCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-EEEEe
Q 041145 70 --YPWPERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE-VAVET 146 (522)
Q Consensus 70 --~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~ 146 (522)
++++. . ....++.++.+.|.+.+.+.++ .++++++|+++.. + ++... |++.+
T Consensus 86 ~~~~~~~-~-~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~--~-------------------~~~v~gv~~~~ 140 (453)
T 3atr_A 86 TVWTVNG-E-GFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIF--E-------------------DGYVKGAVLFN 140 (453)
T ss_dssp CEEEEEE-E-EEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE--E-------------------TTEEEEEEEEE
T ss_pred eEEeECC-C-cEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEE--E-------------------CCEEEEEEEEE
Confidence 00000 0 1225677888888888888777 7999999999987 2 22322 55654
Q ss_pred C-Ce-eEEEEECEEEEeeeccC
Q 041145 147 N-QA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 147 ~-~~-~~~~~~d~vViAtG~~s 166 (522)
. ++ ..++.+|.||.|+|..|
T Consensus 141 ~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 141 RRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TTTTEEEEEECSEEEECCGGGC
T ss_pred cCCCceEEEEcCEEEECcCCch
Confidence 2 22 34789999999999884
No 124
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.83 E-value=4.3e-08 Score=103.49 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=82.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc----------------------cCc------ccccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS----------------------FNS------TKLQT 60 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~----------------------~~~------~~~~~ 60 (522)
..+|+|||||++|+++|..| .|++|+|||+.+.++....... .+. ..+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 35899999999999999999 8999999999887653322100 000 00000
Q ss_pred CC--CCcccCCCCCC--------CCCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCcccc
Q 041145 61 PR--CDFEFSDYPWP--------ERDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEY 130 (522)
Q Consensus 61 ~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 130 (522)
.. .+..+. ++.. ........++..+.++|.+.+++. ++++++|++++. +
T Consensus 106 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~--~------------- 164 (549)
T 2r0c_A 106 VGGHEVYRIP-LGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQ--R------------- 164 (549)
T ss_dssp BTSCEEEEEC-CCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEE--C-------------
T ss_pred CCCceeEeec-ccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEE--e-------------
Confidence 00 011111 1000 000012356778888888887764 889999999987 4
Q ss_pred CCCCCCCCCEEEEEEeC-Ce-eEEEEECEEEEeeeccC
Q 041145 131 GSLLKGHPVWEVAVETN-QA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 131 ~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vViAtG~~s 166 (522)
.+.++|++.+. ++ .+++.+|+||.|+|.+|
T Consensus 165 ------~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 165 ------DDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp ------SSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred ------CCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 34577888762 12 35799999999999884
No 125
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.82 E-value=4.8e-09 Score=106.26 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC----C-cccCCC----ccCcc-----cccCCCCCcccCCC----
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI----G-GVWKHC----SFNST-----KLQTPRCDFEFSDY---- 70 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~----G-G~w~~~----~~~~~-----~~~~~~~~~~~~~~---- 70 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.. | |.+... ....+ ....+...+.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 56999999999999999999 89999999998653 1 111110 00000 00011111111110
Q ss_pred CCCC-CCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe
Q 041145 71 PWPE-RDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA 149 (522)
Q Consensus 71 ~~~~-~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 149 (522)
.... ...........+.++|.+.+. +. .++++++|++++. + .++|.|++.++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~--~~--~i~~~~~v~~i~~--~-------------------~~~v~v~~~~g~- 138 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFG--PE--RYHTSKCLVGLSQ--D-------------------SETVQMRFSDGT- 138 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHC--ST--TEETTCCEEEEEE--C-------------------SSCEEEEETTSC-
T ss_pred ccccccCcccccCHHHHHHHHHHhCC--Cc--EEEcCCEEEEEEe--c-------------------CCEEEEEECCCC-
Confidence 0000 000112345667777766542 34 7899999999987 3 345778876664
Q ss_pred eEEEEECEEEEeeeccC
Q 041145 150 IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 150 ~~~~~~d~vViAtG~~s 166 (522)
++.+|.||.|+|.+|
T Consensus 139 --~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 139 --KAEANWVIGADGGAS 153 (397)
T ss_dssp --EEEESEEEECCCTTC
T ss_pred --EEECCEEEECCCcch
Confidence 799999999999874
No 126
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.79 E-value=4.7e-08 Score=94.09 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=77.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--C-CCCcEEEccCCCCCc-ccCCC-ccCcccccCCC-CCcccCCCCCCCCCCCCC--CC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R-HYDPLVFEATNSIGG-VWKHC-SFNSTKLQTPR-CDFEFSDYPWPERDDASF--PS 82 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~-g~~v~v~e~~~~~GG-~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 82 (522)
.+||+|||||++|+++|..| . |.+|+|+|+.+.+|| .|... .+..+.+..+. ..+.-.+.++.... ..+ .+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~-~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQD-TYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECS-SEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCC-CEEEecC
Confidence 46999999999999999999 5 899999999988875 44321 11111111000 00000012221110 111 14
Q ss_pred hHHHHHHHHHHHHh-cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--------C---Cee
Q 041145 83 HVELLDYLHGYAVH-FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--------N---QAI 150 (522)
Q Consensus 83 ~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~---~~~ 150 (522)
..++...+...+.+ .++ .+.++++|+++.... .....|.+.. + ...
T Consensus 118 ~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~--------------------~~v~gv~~~~~~~~~~~~~g~~g~~ 175 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKG--------------------NRVGGVVTNWALVAQNHHTQSCMDP 175 (284)
T ss_dssp HHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEET--------------------TEEEEEEEEEHHHHTCTTTSSCCCC
T ss_pred HHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecC--------------------CeEEEEEEeccccccccCccccCce
Confidence 55666666555543 566 688999999998621 1112344431 1 113
Q ss_pred EEEEECEEEEeeecc
Q 041145 151 QWYGFELLVMCIGKF 165 (522)
Q Consensus 151 ~~~~~d~vViAtG~~ 165 (522)
.++.+|.||+|+|..
T Consensus 176 ~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 176 NVMEAKIVVSSCGHD 190 (284)
T ss_dssp EEEEEEEEEECCCSS
T ss_pred EEEECCEEEECCCCc
Confidence 579999999999966
No 127
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.78 E-value=9.8e-09 Score=103.06 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHh-CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL-RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~~~~G 45 (522)
+++|+|||||++|+++|.+| .|++|+|+|+++.+|
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQPG 44 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSSTT
T ss_pred cCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCCcc
Confidence 56999999999999999999 999999999987665
No 128
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.77 E-value=2.2e-08 Score=100.66 Aligned_cols=59 Identities=10% Similarity=-0.021 Sum_probs=45.2
Q ss_pred CCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEE
Q 041145 80 FPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLV 159 (522)
Q Consensus 80 ~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vV 159 (522)
.....++...+.+.+++.++ .+.++++|+++.. + .++|.|++.++ ++.+|.||
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~g----~~~a~~vV 212 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGA--EIFEHTPVLHVER--D-------------------GEALFIKTPSG----DVWANHVV 212 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTC--EEETTCCCCEEEC--S-------------------SSSEEEEETTE----EEEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCC--EEEcCCcEEEEEE--E-------------------CCEEEEEcCCc----eEEcCEEE
Confidence 34567788888888888887 7888999999976 3 34565654332 68999999
Q ss_pred Eeeecc
Q 041145 160 MCIGKF 165 (522)
Q Consensus 160 iAtG~~ 165 (522)
+|+|..
T Consensus 213 ~A~G~~ 218 (382)
T 1ryi_A 213 VASGVW 218 (382)
T ss_dssp ECCGGG
T ss_pred ECCChh
Confidence 999987
No 129
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.77 E-value=3.1e-08 Score=98.85 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEe
Q 041145 82 SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMC 161 (522)
Q Consensus 82 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViA 161 (522)
....+...+.+.+++.+. .++++++|+++.. +. ++.|.|.+.+++ ..++.+|.||+|
T Consensus 148 ~~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~g~-~~~~~a~~VV~A 204 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGA--QLVFHTPLIAGRV--RP------------------EGGFELDFGGAE-PMTLSCRVLINA 204 (369)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEE--CT------------------TSSEEEEECTTS-CEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCCEEEEEEE--cC------------------CceEEEEECCCc-eeEEEeCEEEEC
Confidence 456777778888888887 7899999999987 31 234777765542 247899999999
Q ss_pred eeccC
Q 041145 162 IGKFG 166 (522)
Q Consensus 162 tG~~s 166 (522)
+|.+|
T Consensus 205 ~G~~s 209 (369)
T 3dme_A 205 AGLHA 209 (369)
T ss_dssp CGGGH
T ss_pred CCcch
Confidence 99873
No 130
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.77 E-value=3.5e-08 Score=98.80 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G 45 (522)
.+||+|||||++|+++|..| .|++|+|+|+.+..+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~ 38 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPH 38 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 45999999999999999999 899999999986553
No 131
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.76 E-value=6.5e-08 Score=102.68 Aligned_cols=134 Identities=16% Similarity=0.255 Sum_probs=84.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc----cCccc------c-cCCCCC-------------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS----FNSTK------L-QTPRCD------------- 64 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~----~~~~~------~-~~~~~~------------- 64 (522)
.+||+|||||++|+++|..| .|.+|+|||+.+.+||...... .+... + .++..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 46999999999999999999 8999999999998887543210 00000 0 000000
Q ss_pred -----------------cccCCCCCCC-----C--CCC------CCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEE
Q 041145 65 -----------------FEFSDYPWPE-----R--DDA------SFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRH 114 (522)
Q Consensus 65 -----------------~~~~~~~~~~-----~--~~~------~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~ 114 (522)
+.-.+.++.. . ... .......+...|...+++.++ .++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeEE
Confidence 0000111110 0 000 012356788888888888888 7999999999987
Q ss_pred cCCCCcccccCCccccCCCCCCCCC-EEEEEEe-CCeeEEEEECEEEEeeeccC
Q 041145 115 LGDRDTARVSDTAGEYGSLLKGHPV-WEVAVET-NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~~~~d~vViAtG~~s 166 (522)
++ +++ +-|.+.+ .....++.+|.||+|||.++
T Consensus 284 --~~------------------~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 284 --DD------------------KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp --CT------------------TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred --cC------------------CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 32 122 2355554 22244689999999999873
No 132
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.75 E-value=1.3e-08 Score=107.01 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=101.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC-CCCcccCCCccCcccccCC----------CCC---------cccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN-SIGGVWKHCSFNSTKLQTP----------RCD---------FEFS 68 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~~~~~----------~~~---------~~~~ 68 (522)
.+||+|||||+||++||..| .|.+|+|+|++. .+|+.. +.|....... ... ..|.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~---Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS---CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC---SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC---ccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 47999999999999999999 899999999974 455311 1111110000 000 0010
Q ss_pred CCCCCCC---C-CCCCCChHHHHHHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE
Q 041145 69 DYPWPER---D-DASFPSHVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA 143 (522)
Q Consensus 69 ~~~~~~~---~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 143 (522)
....... . ......+..+...+...++++ ++ .+ ++++|+++.. +. ...+.|.
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~--e~------------------g~V~GV~ 160 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIV--KN------------------NQVVGVR 160 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEE--SS------------------SBEEEEE
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEe--cC------------------CEEEEEE
Confidence 0000000 0 001234567788888888774 66 45 6789999876 31 1123455
Q ss_pred EEeCCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHH
Q 041145 144 VETNQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLA 223 (522)
Q Consensus 144 ~~~~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia 223 (522)
+.++. ++.+|.||+|||.+ ++.+.++ |.+.+. +.+ + |+.++++++
T Consensus 161 t~dG~---~i~AdaVVLATG~~---s~~~~~~---G~~~~~----------------------~Gr---~-G~~~A~~la 205 (637)
T 2zxi_A 161 TNLGV---EYKTKAVVVTTGTF---LNGVIYI---GDKMIP----------------------GGR---L-GEPRSEGLS 205 (637)
T ss_dssp ETTSC---EEECSEEEECCTTC---BTCEEEE---TTEEEE----------------------CSB---T-TBCCBCTHH
T ss_pred ECCCc---EEEeCEEEEccCCC---ccCceec---cceecC----------------------CCC---C-CchhHHHHH
Confidence 55553 79999999999965 4555566 654321 122 2 367889999
Q ss_pred HHHHHhcCCCCCCcEEEEee
Q 041145 224 VECAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 224 ~~l~~~~~~~~~~~Vt~v~R 243 (522)
..|.+.+.. |+.+.+
T Consensus 206 ~~L~~lG~~-----v~~l~t 220 (637)
T 2zxi_A 206 DFYRRFDFP-----LIRFKT 220 (637)
T ss_dssp HHHHHTTCC-----CEEEEE
T ss_pred HHHHhcCCc-----eEEecC
Confidence 999998654 766654
No 133
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.75 E-value=1.1e-08 Score=103.69 Aligned_cols=32 Identities=34% Similarity=0.608 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATNSI 44 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~ 44 (522)
+|+|||||++||++|..| .|++|+||||.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 799999999999999999 89999999997654
No 134
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.73 E-value=4.5e-08 Score=106.14 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=46.1
Q ss_pred ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEe
Q 041145 82 SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMC 161 (522)
Q Consensus 82 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViA 161 (522)
....+...+.+.+++.|+ .++++++|+++.. + .++|.|++.++. ++.+|.||+|
T Consensus 415 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~--~-------------------~~~v~V~t~~G~---~i~Ad~VVlA 468 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGL--QIYYQYQLQNFSR--K-------------------DDCWLLNFAGDQ---QATHSVVVLA 468 (676)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEE--E-------------------TTEEEEEETTSC---EEEESEEEEC
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeeeEEEE--e-------------------CCeEEEEECCCC---EEECCEEEEC
Confidence 446677777777888887 7999999999987 3 345777765544 6999999999
Q ss_pred eeccC
Q 041145 162 IGKFG 166 (522)
Q Consensus 162 tG~~s 166 (522)
+|..+
T Consensus 469 tG~~s 473 (676)
T 3ps9_A 469 NGHQI 473 (676)
T ss_dssp CGGGG
T ss_pred CCcch
Confidence 99883
No 135
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.72 E-value=5.5e-08 Score=104.53 Aligned_cols=139 Identities=13% Similarity=0.068 Sum_probs=86.0
Q ss_pred CCcEEEECCCHHHHHHHHHh-C--CCCcEEEccCCCCCcccCCCcc------------------------CcccccC---
Q 041145 11 SSKIGIIGAGISGIATAKQL-R--HYDPLVFEATNSIGGVWKHCSF------------------------NSTKLQT--- 60 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~--g~~v~v~e~~~~~GG~w~~~~~------------------------~~~~~~~--- 60 (522)
..+|+|||||++||++|..| . |++|+|||+.+..+........ .......
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 45899999999999999999 5 8999999998765432221000 0000000
Q ss_pred --CCCCcccCCCCCC--C--CCCCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCC
Q 041145 61 --PRCDFEFSDYPWP--E--RDDASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLL 134 (522)
Q Consensus 61 --~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 134 (522)
.........++.. . .......++..+..+|.+.+++.+..-.++++++|++++..++..
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~--------------- 176 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAA--------------- 176 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCS---------------
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCC---------------
Confidence 0001000001100 0 000123577889999999998876422688999999998722101
Q ss_pred CCCCCEEEEEEe-----CCeeEEEEECEEEEeeeccC
Q 041145 135 KGHPVWEVAVET-----NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 135 ~~~~~~~v~~~~-----~~~~~~~~~d~vViAtG~~s 166 (522)
...+.|++++ .+..+++.+|+||.|+|.+|
T Consensus 177 --~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 177 --DYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp --SCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred --cCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 1357787765 22245799999999999885
No 136
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.72 E-value=2e-08 Score=102.98 Aligned_cols=37 Identities=35% Similarity=0.478 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCCCCcc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATNSIGGV 47 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~~GG~ 47 (522)
.+||+|||||++|+++|.+| .|+ +|+|+|+.+..+|.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~ 45 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAI 45 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCC
Confidence 46999999999999999999 899 99999998876643
No 137
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.70 E-value=6.5e-08 Score=97.20 Aligned_cols=58 Identities=9% Similarity=0.014 Sum_probs=44.3
Q ss_pred CChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-EEEEeCCeeEEEEECEEE
Q 041145 81 PSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE-VAVETNQAIQWYGFELLV 159 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~d~vV 159 (522)
.....+...+.+.+++.++ .+.++++|+++.. + .++|. |++.++ ++.+|.||
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~i~~--~-------------------~~~v~gv~~~~g----~i~a~~VV 198 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGA--KLLEYTEVKGFLI--E-------------------NNEIKGVKTNKG----IIKTGIVV 198 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEECSCCEEEEEE--S-------------------SSBEEEEEETTE----EEECSEEE
T ss_pred ECHHHHHHHHHHHHHHCCC--EEECCceEEEEEE--E-------------------CCEEEEEEECCc----EEECCEEE
Confidence 3456777778888888887 7889999999987 3 23555 655333 68999999
Q ss_pred Eeeecc
Q 041145 160 MCIGKF 165 (522)
Q Consensus 160 iAtG~~ 165 (522)
+|+|..
T Consensus 199 ~A~G~~ 204 (382)
T 1y56_B 199 NATNAW 204 (382)
T ss_dssp ECCGGG
T ss_pred ECcchh
Confidence 999987
No 138
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.68 E-value=3e-08 Score=104.61 Aligned_cols=170 Identities=12% Similarity=0.159 Sum_probs=97.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC-CCCcccCCCccCccc-------ccCCCCC---------cccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN-SIGGVWKHCSFNSTK-------LQTPRCD---------FEFSDYP 71 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~-------~~~~~~~---------~~~~~~~ 71 (522)
.+||+|||||++|++||..| .|.+|+|+|+.. .+|+.+......+.. +...... ..|....
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 57999999999999999999 899999999985 466543221100000 0000000 0110000
Q ss_pred ---CCCCC-CCCCCChHHHHHHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-EEEE
Q 041145 72 ---WPERD-DASFPSHVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE-VAVE 145 (522)
Q Consensus 72 ---~~~~~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~ 145 (522)
-+... ......+..+..++.+.++++ ++ .+ ++.+|+.+.. + .++.. |.+.
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~--d-------------------~g~V~GV~t~ 156 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSA--N-------------------SGKFSSVTVR 156 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEE--E-------------------TTEEEEEEET
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEe--c-------------------CCEEEEEEEC
Confidence 00000 001245667788888888775 65 44 5668888765 2 12222 5554
Q ss_pred eCCeeEEEEECEEEEeeeccCCCCCCCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCCCCHHHHHHH
Q 041145 146 TNQAIQWYGFELLVMCIGKFGDIPRMPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYRKSAIDLAVE 225 (522)
Q Consensus 146 ~~~~~~~~~~d~vViAtG~~s~~p~~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G~sg~dia~~ 225 (522)
++. ++.+|.||+|||.+ ++.+.++ |...+. +.+++ | +.++++++..
T Consensus 157 ~G~---~i~Ad~VVLATG~~---s~~~i~~---G~~~~~----------------------~g~~v--G-~~~a~~la~~ 202 (641)
T 3cp8_A 157 SGR---AIQAKAAILACGTF---LNGLIHI---GMDHFP----------------------GGRST--A-EPPVEGLTES 202 (641)
T ss_dssp TSC---EEEEEEEEECCTTC---BTCEEEE---TTEEEE----------------------CSSST--T-SCCBCSHHHH
T ss_pred CCc---EEEeCEEEECcCCC---CCcccee---eeeeec----------------------ccccc--C-CchhhhhHHH
Confidence 443 79999999999965 3333333 332210 11221 3 6788899999
Q ss_pred HHHhcCCCCCCcEEEEee
Q 041145 226 CAEANQGPNGQPCTMVIR 243 (522)
Q Consensus 226 l~~~~~~~~~~~Vt~v~R 243 (522)
|.+.+.+ |+.+..
T Consensus 203 L~~~G~k-----v~~l~t 215 (641)
T 3cp8_A 203 LASLGFS-----FGRLKT 215 (641)
T ss_dssp HHHTTCC-----EEEEEE
T ss_pred HHhCCce-----EEeecC
Confidence 9888654 766643
No 139
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.67 E-value=1.4e-07 Score=99.92 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=83.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCC--cc--Cccc------c-cCC----------------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHC--SF--NSTK------L-QTP---------------- 61 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~--~~--~~~~------~-~~~---------------- 61 (522)
..||+|||||++|+++|..| .|.+|+|||+.+.+||..... .. +... + .++
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 46999999999999999999 799999999998887643210 00 0000 0 000
Q ss_pred CCC--------------cccCCCCCC-----CC--CCC------CCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEE
Q 041145 62 RCD--------------FEFSDYPWP-----ER--DDA------SFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRH 114 (522)
Q Consensus 62 ~~~--------------~~~~~~~~~-----~~--~~~------~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~ 114 (522)
... +.-.+.++. .. ... .......+...|...+++.++ .++++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKLVV 278 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEEEE
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEE
Confidence 000 000011111 00 000 113467788888888888888 7999999999987
Q ss_pred cCCCCcccccCCccccCCCCCCCCC-EEEEEEeCCe-eEEEEECEEEEeeeccC
Q 041145 115 LGDRDTARVSDTAGEYGSLLKGHPV-WEVAVETNQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~-~~~~~~d~vViAtG~~s 166 (522)
++ +++ +-|.+.+.++ ..++.+|.||+|||.++
T Consensus 279 --~~------------------~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 279 --ND------------------DHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp --CT------------------TSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred --CC------------------CCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 31 122 2355554222 34689999999999873
No 140
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.66 E-value=1.6e-07 Score=99.32 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCccc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVW 48 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w 48 (522)
.+||+|||||++|+++|..| .|++|+|+|+++..+|+.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 57999999999999999999 899999999987655543
No 141
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.64 E-value=1.7e-07 Score=101.78 Aligned_cols=60 Identities=10% Similarity=0.157 Sum_probs=45.0
Q ss_pred ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEe
Q 041145 82 SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMC 161 (522)
Q Consensus 82 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViA 161 (522)
....+...+.+.+++.|+ .++++++|+++.. + .++|.|.+.+++ .++.+|.||+|
T Consensus 410 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~--~-------------------~~~v~V~t~~G~--~~i~Ad~VVlA 464 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGM--TCHYQHELQRLKR--I-------------------DSQWQLTFGQSQ--AAKHHATVILA 464 (689)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEE--C-------------------SSSEEEEEC-CC--CCEEESEEEEC
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeEeEEEE--e-------------------CCeEEEEeCCCc--EEEECCEEEEC
Confidence 345677777777788887 7999999999987 3 345777775541 14889999999
Q ss_pred eeccC
Q 041145 162 IGKFG 166 (522)
Q Consensus 162 tG~~s 166 (522)
+|..+
T Consensus 465 tG~~s 469 (689)
T 3pvc_A 465 TGHRL 469 (689)
T ss_dssp CGGGT
T ss_pred CCcch
Confidence 99883
No 142
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.63 E-value=1e-07 Score=95.98 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G 45 (522)
.+||+|||||++|+++|..| .|++|+|+|+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 45999999999999999999 899999999986554
No 143
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.61 E-value=4.3e-07 Score=94.95 Aligned_cols=37 Identities=32% Similarity=0.529 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGV 47 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~ 47 (522)
.+||+|||||++|+++|..| .|.+|+|+||.+.+||.
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 46999999999999999999 89999999999988764
No 144
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.60 E-value=2e-07 Score=95.27 Aligned_cols=38 Identities=26% Similarity=0.443 Sum_probs=35.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWK 49 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~ 49 (522)
+||+|||||++|++||..| .|++|+|+|+++.+||.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 3899999999999999999 8999999999999998765
No 145
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.60 E-value=3.2e-08 Score=93.94 Aligned_cols=40 Identities=30% Similarity=0.540 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
..||+|||||||||+||..| .|++|+|||+++.+||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 46999999999999999999 89999999999999998765
No 146
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.58 E-value=3.1e-07 Score=95.79 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-Ce-eEEEEECEEE
Q 041145 82 SHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-QA-IQWYGFELLV 159 (522)
Q Consensus 82 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vV 159 (522)
....+...+...+.+.|. .+.++++|+++.. + .+.|.|++.+. ++ ..++.+|.||
T Consensus 147 ~~~~l~~~l~~~a~~~Gv--~i~~~~~V~~l~~--~-------------------~~~~~V~~~d~~~G~~~~i~A~~VV 203 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGG--EVLTRTRATSARR--E-------------------NGLWIVEAEDIDTGKKYSWQARGLV 203 (501)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSEEEEEEEE--E-------------------TTEEEEEEEETTTCCEEEEEESCEE
T ss_pred cHHHHHHHHHHHHHHcCC--EEEcCcEEEEEEE--e-------------------CCEEEEEEEECCCCCEEEEECCEEE
Confidence 355667777777777887 7888999999987 3 23577887642 22 3478999999
Q ss_pred EeeeccC
Q 041145 160 MCIGKFG 166 (522)
Q Consensus 160 iAtG~~s 166 (522)
+|+|.++
T Consensus 204 ~AtG~~s 210 (501)
T 2qcu_A 204 NATGPWV 210 (501)
T ss_dssp ECCGGGH
T ss_pred ECCChhH
Confidence 9999873
No 147
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.57 E-value=1.8e-07 Score=94.44 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI 44 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~ 44 (522)
.||+|||||++|+++|..| .|++|+|+|+.+..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 5999999999999999999 89999999998654
No 148
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.55 E-value=4.3e-07 Score=97.84 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=61.4
Q ss_pred CCcEEEECCCHHHHHHHHHh-C------CCCcEEEccCCCCCcccCC----------------------C--ccCccccc
Q 041145 11 SSKIGIIGAGISGIATAKQL-R------HYDPLVFEATNSIGGVWKH----------------------C--SFNSTKLQ 59 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~------g~~v~v~e~~~~~GG~w~~----------------------~--~~~~~~~~ 59 (522)
..+|+|||||++||++|..| . |++|+|||+.+........ . ....+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 35899999999999999999 6 8999999997654211110 0 00000000
Q ss_pred CCC---CCc---ccCCCCCC-CCCCCCCCChHHHHHHHHHHHHhcC---CcCceEeceEEEEEEE
Q 041145 60 TPR---CDF---EFSDYPWP-ERDDASFPSHVELLDYLHGYAVHFD---VLKYIKFNSKVVEIRH 114 (522)
Q Consensus 60 ~~~---~~~---~~~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~~---l~~~i~~~~~V~~v~~ 114 (522)
.+. .+. .+.+.... ........++..+..+|.+.+++++ + .++++++|++++.
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~ 150 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEI 150 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEe
Confidence 000 000 01100000 0000123678888899988888876 5 7999999999987
No 149
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.54 E-value=7.2e-07 Score=94.53 Aligned_cols=134 Identities=22% Similarity=0.242 Sum_probs=82.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCc--c--Ccc------cc-cCCCCCc------------
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCS--F--NST------KL-QTPRCDF------------ 65 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~--~--~~~------~~-~~~~~~~------------ 65 (522)
.++|+|||||++|+++|..| .|++|+|||+.+.+||...... + +.. .+ .++..++
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 45999999999999999999 7999999999998887542210 0 000 00 0000000
Q ss_pred ---------------c-c--CCCCCCC----CC---CCC------CCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEE
Q 041145 66 ---------------E-F--SDYPWPE----RD---DAS------FPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRH 114 (522)
Q Consensus 66 ---------------~-~--~~~~~~~----~~---~~~------~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~ 114 (522)
. + .+.++.. .. ... ......+...|...+++.++ .++++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEEE
Confidence 0 0 0111110 00 000 12366788888888888888 7999999999976
Q ss_pred cCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeecc
Q 041145 115 LGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKF 165 (522)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~ 165 (522)
+++ ...+-|.+.+.++ ..++.+|.||+|||.+
T Consensus 284 --~~~-----------------g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 284 --DAS-----------------GKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp --C-------------------CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred --CCC-----------------CeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 310 1123456654222 4568999999999977
No 150
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.51 E-value=4.5e-07 Score=91.71 Aligned_cols=59 Identities=15% Similarity=-0.002 Sum_probs=44.2
Q ss_pred CChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEE
Q 041145 81 PSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVM 160 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vVi 160 (522)
.....+...+.+.+++.++ .+.++++|+++.. +. ...|.|++.++ ++.+|.||+
T Consensus 171 ~~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~g----~~~a~~vV~ 224 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGV--DIIQNCEVTGFIK--DG------------------EKVTGVKTTRG----TIHAGKVAL 224 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEE--SS------------------SBEEEEEETTC----CEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCC--EEEcCCeEEEEEE--eC------------------CEEEEEEeCCc----eEECCEEEE
Confidence 3455777788888888887 7889999999987 31 22356665443 589999999
Q ss_pred eeecc
Q 041145 161 CIGKF 165 (522)
Q Consensus 161 AtG~~ 165 (522)
|+|..
T Consensus 225 a~G~~ 229 (405)
T 2gag_B 225 AGAGH 229 (405)
T ss_dssp CCGGG
T ss_pred CCchh
Confidence 99987
No 151
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.51 E-value=3e-07 Score=89.77 Aligned_cols=101 Identities=19% Similarity=0.286 Sum_probs=60.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCC-cccCCCc-cCcccccCCCCCccc--CCCCCCCCCC-CCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIG-GVWKHCS-FNSTKLQTPRCDFEF--SDYPWPERDD-ASFP 81 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~G-G~w~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~ 81 (522)
.+||+|||||++|+++|..| . |++|+|+|+.+.+| |.|.... +....+. +...-.+ .+.++..... ....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR-KPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE-TTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc-hHHHHHHHHcCCcccccCCeEEEe
Confidence 47999999999999999999 4 99999999998876 4564321 2222221 1111001 1122211100 0112
Q ss_pred ChHHHHHHHHHHHHhc-CCcCceEeceEEEEEEE
Q 041145 82 SHVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRH 114 (522)
Q Consensus 82 ~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~ 114 (522)
+..++...|...+... ++ .+.++++|+++..
T Consensus 158 ~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~ 189 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNV--KLFNATTVEDLIT 189 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEe
Confidence 3455556666556553 66 6888999988876
No 152
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.48 E-value=3.9e-07 Score=94.10 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=34.0
Q ss_pred CcEEEECCCHHHHHHHHHh--CC------CCcEEEccCCCCCccc
Q 041145 12 SKIGIIGAGISGIATAKQL--RH------YDPLVFEATNSIGGVW 48 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g------~~v~v~e~~~~~GG~w 48 (522)
+||+|||||++||+||..| .| ++|+|+|+++.+||..
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 5999999999999999999 77 9999999999998743
No 153
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.48 E-value=1.3e-07 Score=96.33 Aligned_cols=37 Identities=27% Similarity=0.548 Sum_probs=34.8
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWK 49 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~ 49 (522)
||+|||||++||++|..| .|++|+|+|+++.+||...
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeE
Confidence 899999999999999999 8999999999999998665
No 154
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.46 E-value=1.7e-07 Score=95.61 Aligned_cols=37 Identities=35% Similarity=0.541 Sum_probs=34.7
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWK 49 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~ 49 (522)
||+|||||++||+||..| .|++|+|+|+++.+||...
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 899999999999999999 8999999999999988654
No 155
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.44 E-value=3e-07 Score=96.90 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=44.4
Q ss_pred CChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEE
Q 041145 81 PSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVM 160 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vVi 160 (522)
.++.++..+|...+++.++ .+.++ +|+++.. +++ ...+.|++.++. ++.+|.||+
T Consensus 162 i~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~--~~~-----------------g~~~~v~~~~g~---~i~ad~vV~ 216 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGV--NRVVD-EVVDVRL--NNR-----------------GYISNLLTKEGR---TLEADLFID 216 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEE--CTT-----------------SCEEEEEETTSC---EECCSEEEE
T ss_pred EeHHHHHHHHHHHHHHCCC--EEEEe-eEeEEEE--cCC-----------------CcEEEEEECCCc---EEEeCEEEE
Confidence 3557888889888888887 67788 8999987 321 112456555443 689999999
Q ss_pred eeeccC
Q 041145 161 CIGKFG 166 (522)
Q Consensus 161 AtG~~s 166 (522)
|+|..|
T Consensus 217 A~G~~s 222 (538)
T 2aqj_A 217 CSGMRG 222 (538)
T ss_dssp CCGGGC
T ss_pred CCCCch
Confidence 999884
No 156
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.39 E-value=1.1e-06 Score=85.38 Aligned_cols=100 Identities=17% Similarity=0.301 Sum_probs=60.6
Q ss_pred CcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCC-cccCCC-ccCcccccCCC-CCcccCCCCCCCCCCCCC--CC
Q 041145 12 SKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIG-GVWKHC-SFNSTKLQTPR-CDFEFSDYPWPERDDASF--PS 82 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~G-G~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 82 (522)
+||+|||||++|+++|..| . |++|+|||+.+.+| |.|... .++...+.... ..+.-.+.++.... ..+ .+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g-~~~~~~~ 144 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEG-DYVVVKH 144 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECS-SEEEESC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCC-CeEEEcc
Confidence 4899999999999999999 5 99999999998887 566431 11111111110 00001112221111 111 23
Q ss_pred hHHHHHHHHHHHHhc-CCcCceEeceEEEEEEE
Q 041145 83 HVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRH 114 (522)
Q Consensus 83 ~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~ 114 (522)
..++...+.+.+... ++ .+..+++|+++..
T Consensus 145 ~~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~ 175 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNV--KLFNATCVEDLVT 175 (326)
T ss_dssp HHHHHHHHHHHHHTSTTE--EEETTEEEEEEEE
T ss_pred hHHHHHHHHHHHHHhcCc--EEEecceeeeeee
Confidence 456666666666554 55 6778899999887
No 157
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.39 E-value=9e-07 Score=98.14 Aligned_cols=33 Identities=36% Similarity=0.550 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~ 43 (522)
..||+|||||++|+++|.+| .|. +|+|||++..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 46999999999999999999 898 9999999875
No 158
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.37 E-value=2.6e-07 Score=93.67 Aligned_cols=32 Identities=34% Similarity=0.271 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--R--HYDPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~ 43 (522)
+||+|||||++|+++|..| . |++|+|||+...
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 6899999999999999999 6 999999999753
No 159
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.36 E-value=4.8e-06 Score=88.30 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G 45 (522)
..||+|||||++|+++|..| .|.+|+|+|+.+..+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 46999999999999999999 799999999987653
No 160
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.36 E-value=1.4e-06 Score=89.06 Aligned_cols=106 Identities=17% Similarity=0.066 Sum_probs=72.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhh
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSI 287 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 287 (522)
|+|+|||+|..|+.+|..|.+.+.+ .+||++.+++.+...+. ..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~---~~VtlI~~~~~~~~~p~-------l~-------------------------- 46 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD---LKITLISDRPYFGFTPA-------FP-------------------------- 46 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT---CEEEEECSSSEEECGGG-------HH--------------------------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC---CeEEEEcCCCCCccCcc-------HH--------------------------
Confidence 7999999999999999999987643 57999999886442210 00
Q ss_pred hhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecC--cEEecCC
Q 041145 288 LSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSG--GIEFEDK 365 (522)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~--~v~~~dG 365 (522)
+ ....... +. .+...+.+.+++.+|+++.+.+++++.+ .|+++||
T Consensus 47 -----~--------v~~g~~~-------~~-------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g 93 (430)
T 3hyw_A 47 -----H--------LAMGWRK-------FE-------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSG 93 (430)
T ss_dssp -----H--------HHHTCSC-------GG-------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTC
T ss_pred -----H--------HhcCCCC-------HH-------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCC
Confidence 0 0000000 00 0111122345566899999999899754 5999999
Q ss_pred ceeeccEEEEeccCCCC
Q 041145 366 SKLEADVVLLATGYDGK 382 (522)
Q Consensus 366 ~~~~~D~VI~ATG~~~~ 382 (522)
+++++|.+|+|||-++.
T Consensus 94 ~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 94 KKIEYDYLVIATGPKLV 110 (430)
T ss_dssp CEEECSEEEECCCCEEE
T ss_pred CEEECCEEEEeCCCCcc
Confidence 99999999999998654
No 161
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.35 E-value=1.2e-06 Score=90.23 Aligned_cols=99 Identities=13% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+.+|..| .|.+|+++|+.+.+. + ....++.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------------------------~--~~~~~~~~ 212 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--------------------------------P--TMDLEVSR 212 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------T--TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------------c--ccCHHHHH
Confidence 46899999999999999999 899999999975431 1 01245667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+..++.++ .+.++++|++++. + .+.+.+++.++. ++.+|.||+|+|..
T Consensus 213 ~l~~~l~~~Gv--~i~~~~~V~~i~~--~-------------------~~~v~v~~~~g~---~i~~D~vv~A~G~~--- 263 (455)
T 2yqu_A 213 AAERVFKKQGL--TIRTGVRVTAVVP--E-------------------AKGARVELEGGE---VLEADRVLVAVGRR--- 263 (455)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEE--E-------------------TTEEEEEETTSC---EEEESEEEECSCEE---
T ss_pred HHHHHHHHCCC--EEEECCEEEEEEE--e-------------------CCEEEEEECCCe---EEEcCEEEECcCCC---
Confidence 77777777888 7899999999986 2 223455554443 78999999999965
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+.+
T Consensus 264 p~~~ 267 (455)
T 2yqu_A 264 PYTE 267 (455)
T ss_dssp ECCT
T ss_pred cCCC
Confidence 5543
No 162
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.35 E-value=8e-07 Score=88.41 Aligned_cols=90 Identities=23% Similarity=0.320 Sum_probs=56.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC-CCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT-NSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~-~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||||++||++|..| .|++|+|||++ +.+||.|.. ++... ..+.. +....+.+.... ..+ ....
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t--~~~~~-~~~~~-~~~~~~~~e~G~-~~~---~~~~ 115 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT--FHAKK-GEPSP-FADPAQYAEAGA-MRL---PSFH 115 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE--ECCCT-TSCCS-SSSTTCCEESSC-CCE---ETTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee--ecccc-ccccc-ccCCCcEEecCc-eee---cchH
Confidence 56999999999999999999 89999999999 999998874 22110 11100 000011111000 111 1234
Q ss_pred HHHHHHHHhcCCcCceEeceE
Q 041145 88 DYLHGYAVHFDVLKYIKFNSK 108 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~ 108 (522)
.++.++++++++...+.++..
T Consensus 116 ~~~~~~~~~lGl~~~~~~~~~ 136 (376)
T 2e1m_A 116 PLTLALIDKLGLKRRLFFNVD 136 (376)
T ss_dssp HHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHHHHHcCCCcceeeccc
Confidence 577788999998666655554
No 163
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.29 E-value=2.4e-06 Score=85.90 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +.+ ...++.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------------------~~~-~~~~~~~ 191 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM--------------------------------PGL-LHPAAAK 191 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TTT-SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh--------------------------------hcc-cCHHHHH
Confidence 46899999999999999999 899999999975431 111 1345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.+.+..++.++ .+.++++|++++. + .+.+.|++.++. ++.+|.||+|+|..
T Consensus 192 ~l~~~l~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~g~---~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 192 AVQAGLEGLGV--RFHLGPVLASLKK--A-------------------GEGLEAHLSDGE---VIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHTTTC--EEEESCCEEEEEE--E-------------------TTEEEEEETTSC---EEEESEEEECSCEE
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEe--c-------------------CCEEEEEECCCC---EEECCEEEECcCCC
Confidence 77777888888 7889999999986 2 234566665553 79999999999965
No 164
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.27 E-value=4.5e-06 Score=86.11 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=76.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+|+|+.+.+. + ....++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~--~~~~~~~~ 214 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL--------------------------------P--QGDPETAA 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------T--TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------c--ccCHHHHH
Confidence 46899999999999999999 899999999976431 1 11346677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC--CeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN--QAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~d~vViAtG~~s 166 (522)
++.+..++.++ .+.++++|++++. + .+...|++.+. +...++.+|.||+|+|..
T Consensus 215 ~l~~~l~~~gV--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~- 270 (464)
T 2eq6_A 215 LLRRALEKEGI--RVRTKTKAVGYEK--K-------------------KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK- 270 (464)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEE--E-------------------TTEEEEEEEETTCCSCEEEEESEEEECSCEE-
T ss_pred HHHHHHHhcCC--EEEcCCEEEEEEE--e-------------------CCEEEEEEeecCCCceeEEEcCEEEECCCcc-
Confidence 78888888888 7899999999986 2 23355666522 213468999999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+.+
T Consensus 271 --p~~~ 274 (464)
T 2eq6_A 271 --PRTE 274 (464)
T ss_dssp --ESCT
T ss_pred --cCCC
Confidence 5554
No 165
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.27 E-value=2.6e-06 Score=89.43 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=44.0
Q ss_pred CChHHHHHHHHHHHHh-cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEE
Q 041145 81 PSHVELLDYLHGYAVH-FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLV 159 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vV 159 (522)
..+..+..+|.+.+++ .++ .+.++ +|++++. +++ .....|++.+++ ++.+|.||
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~--~~~-----------------g~~~~v~~~~g~---~i~ad~vV 226 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGV--THIRD-HVSQIIN--NQH-----------------GDIEKLITKQNG---EISGQLFI 226 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEE--CTT-----------------SCEEEEEESSSC---EEECSEEE
T ss_pred EcHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEe--cCC-----------------CcEEEEEECCCC---EEEcCEEE
Confidence 4677888999888888 787 68888 6999987 311 112245554443 59999999
Q ss_pred EeeeccC
Q 041145 160 MCIGKFG 166 (522)
Q Consensus 160 iAtG~~s 166 (522)
.|+|..|
T Consensus 227 ~AdG~~S 233 (526)
T 2pyx_A 227 DCTGAKS 233 (526)
T ss_dssp ECSGGGC
T ss_pred ECCCcch
Confidence 9999884
No 166
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.25 E-value=2.1e-07 Score=93.54 Aligned_cols=117 Identities=21% Similarity=0.166 Sum_probs=71.8
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCC---Cccc--CCCccC-----ccc----cc---CCCCCccc--CC
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATNSI---GGVW--KHCSFN-----STK----LQ---TPRCDFEF--SD 69 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~---GG~w--~~~~~~-----~~~----~~---~~~~~~~~--~~ 69 (522)
+|+|||||++|+++|..| . |++|+|||+++.+ |... ..+... ++. +. .+...+.+ .+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 899999999999999999 6 9999999998766 3211 000000 000 00 00000111 00
Q ss_pred CCCCCCCCC--CCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC
Q 041145 70 YPWPERDDA--SFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN 147 (522)
Q Consensus 70 ~~~~~~~~~--~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 147 (522)
..+...... ....+.++.+.|.+.+++.++ .++++++|++++. . .
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~--~-----------------------------~ 128 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGI--AIRFESPLLEHGE--L-----------------------------P 128 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGGG--C-----------------------------C
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCC--EEEeCCEeccchh--c-----------------------------c
Confidence 001111001 125678899999998888777 6888888876532 0 0
Q ss_pred CeeEEEEECEEEEeeeccC
Q 041145 148 QAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 148 ~~~~~~~~d~vViAtG~~s 166 (522)
++.+|.||.|+|.+|
T Consensus 129 ----~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 129 ----LADYDLVVLANGVNH 143 (381)
T ss_dssp ----GGGCSEEEECCGGGG
T ss_pred ----cccCCEEEECCCCCc
Confidence 246899999999984
No 167
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.25 E-value=5.7e-06 Score=87.52 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGV 47 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~ 47 (522)
.+||+|||||++|+++|..| .|++|+|+|+.+..+|+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 46999999999999999999 89999999998655443
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.24 E-value=8.2e-06 Score=84.25 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcc
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGV 47 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~ 47 (522)
||+|||||++|+++|..| .|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 699999999999999999 89999999998 55553
No 169
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.24 E-value=2.9e-06 Score=85.77 Aligned_cols=108 Identities=13% Similarity=0.027 Sum_probs=72.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHh
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLC 285 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~ 285 (522)
.||||+|||+|..|+-+|..|.+.+.. .+||++.+++.+..... ...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~---~~Vtlie~~~~~~~~p~-------~~~----------------------- 47 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPS---IEVTLIEPNETYYTCYM-------SNE----------------------- 47 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTT---SEEEEECSCSSEECSTT-------HHH-----------------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcC---CeEEEEeCCCCCCCccC-------HHH-----------------------
Confidence 479999999999999999999887652 57999988875432211 000
Q ss_pred hhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecC--cEEec
Q 041145 286 SILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSG--GIEFE 363 (522)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~--~v~~~ 363 (522)
.+... .+... +... ++.+.+.+|+++.+.+.+++.+ .|.+.
T Consensus 48 ----------------v~~g~--------~~~~~------------~~~~-~~~~~~~gv~~i~~~v~~id~~~~~v~~~ 90 (401)
T 3vrd_B 48 ----------------VIGGD--------RELAS------------LRVG-YDGLRAHGIQVVHDSALGIDPDKKLVKTA 90 (401)
T ss_dssp ----------------HHHTS--------SCGGG------------GEEC-SHHHHHTTCEEECSCEEEEETTTTEEEET
T ss_pred ----------------HhcCC--------CCHHH------------HhhC-HHHHHHCCCEEEEeEEEEEEccCcEEEec
Confidence 00000 00000 0000 1223455788998888888764 48899
Q ss_pred CCceeeccEEEEeccCCCCc
Q 041145 364 DKSKLEADVVLLATGYDGKK 383 (522)
Q Consensus 364 dG~~~~~D~VI~ATG~~~~~ 383 (522)
+|+++++|.+|+|||-+++.
T Consensus 91 ~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 91 GGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp TSCEEECSEEEECCCEEECG
T ss_pred ccceeecceeeeccCCcccc
Confidence 99999999999999998764
No 170
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.24 E-value=2.8e-06 Score=88.80 Aligned_cols=61 Identities=23% Similarity=0.229 Sum_probs=45.4
Q ss_pred CChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEE
Q 041145 81 PSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVM 160 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vVi 160 (522)
..+..+...|.+.+.+.++ .+.++ +|+++.. +++ ...+.|++.+++ ++.+|.||.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~--~~~-----------------~~~~~v~~~~g~---~~~ad~vV~ 224 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGV--RHVVD-DVQHVGQ--DER-----------------GWISGVHTKQHG---EISGDLFVD 224 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEE--CTT-----------------SCEEEEEESSSC---EEECSEEEE
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEE--cCC-----------------CCEEEEEECCCC---EEEcCEEEE
Confidence 4678888899888888887 68888 8999987 321 112456555543 799999999
Q ss_pred eeeccC
Q 041145 161 CIGKFG 166 (522)
Q Consensus 161 AtG~~s 166 (522)
|+|..|
T Consensus 225 A~G~~S 230 (511)
T 2weu_A 225 CTGFRG 230 (511)
T ss_dssp CCGGGC
T ss_pred CCCcch
Confidence 999884
No 171
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.23 E-value=5.9e-07 Score=93.93 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=36.1
Q ss_pred CCcEEEECCCHHHHHHHHHh---CCCCcEEEccCCCCCcccC
Q 041145 11 SSKIGIIGAGISGIATAKQL---RHYDPLVFEATNSIGGVWK 49 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~~~GG~w~ 49 (522)
..||+|||||++||+||..| .|++|+|+|+++.+||...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 56999999999999999999 4999999999999999765
No 172
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.23 E-value=7.1e-06 Score=87.25 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G 45 (522)
..||+|||||++|++||..| .|.+|+|+|+....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 46999999999999999999 799999999986543
No 173
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=6.9e-06 Score=84.48 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+|+|+.+.+. +. ...++.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 215 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL--------------------------------SG--FEKQMAA 215 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++....++.++ .+.++++|++++. + .+...+++.+.++..++.+|.||+|+|..
T Consensus 216 ~l~~~l~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~g~~~~~~~D~vv~a~G~~--- 269 (455)
T 1ebd_A 216 IIKKRLKKKGV--EVVTNALAKGAEE--R-------------------EDGVTVTYEANGETKTIDADYVLVTVGRR--- 269 (455)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEEE--E-------------------TTEEEEEEEETTEEEEEEESEEEECSCEE---
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEE--e-------------------CCeEEEEEEeCCceeEEEcCEEEECcCCC---
Confidence 78788888888 7899999999986 2 22345555432223478999999999955
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+.+
T Consensus 270 p~~~ 273 (455)
T 1ebd_A 270 PNTD 273 (455)
T ss_dssp ESCS
T ss_pred cccC
Confidence 5553
No 174
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.22 E-value=2.9e-06 Score=89.52 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=45.4
Q ss_pred CChHHHHHHHHHHHHhc-CCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEE
Q 041145 81 PSHVELLDYLHGYAVHF-DVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLV 159 (522)
Q Consensus 81 ~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vV 159 (522)
.....+..+|.+.+++. ++ .+.++ +|+++.. +++ ...+.|++.++. ++.+|.||
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~--~~~-----------------g~~~~v~~~~G~---~i~ad~vI 245 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQR--DAN-----------------GNIESVRTATGR---VFDADLFV 245 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEE--CTT-----------------SCEEEEEETTSC---EEECSEEE
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEE--cCC-----------------CCEEEEEECCCC---EEECCEEE
Confidence 56778899999999888 87 78888 9999987 311 112345554443 69999999
Q ss_pred EeeeccC
Q 041145 160 MCIGKFG 166 (522)
Q Consensus 160 iAtG~~s 166 (522)
+|+|..|
T Consensus 246 ~A~G~~S 252 (550)
T 2e4g_A 246 DCSGFRG 252 (550)
T ss_dssp ECCGGGC
T ss_pred ECCCCch
Confidence 9999874
No 175
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.21 E-value=3.2e-06 Score=88.75 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHh-CCCCcEEEccCCCCCc
Q 041145 11 SSKIGIIGAGISGIATAKQL-RHYDPLVFEATNSIGG 46 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~~~~GG 46 (522)
..||+|||||++|+++|..| .|.+|+|+|+.+..+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCCCC
Confidence 46999999999999999999 8899999999887654
No 176
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.21 E-value=3.4e-06 Score=91.91 Aligned_cols=36 Identities=44% Similarity=0.637 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGG 46 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG 46 (522)
.++|+|||||++|+++|..| .|++|+|+|+.+.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 57999999999999999999 8999999999998888
No 177
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.20 E-value=2.1e-06 Score=88.18 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=31.1
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CC-CCcEEEccCCCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RH-YDPLVFEATNSI 44 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~~~ 44 (522)
|+.+||+|||||++|+++|..| .| .+|+|+|+...+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 4467999999999999999999 78 999999994343
No 178
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.19 E-value=1e-05 Score=83.35 Aligned_cols=168 Identities=11% Similarity=0.042 Sum_probs=86.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--C--CCCcEEEccCCCCCcccCCCccCcc--cccCCCCCcccCCCCCC-------CCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R--HYDPLVFEATNSIGGVWKHCSFNST--KLQTPRCDFEFSDYPWP-------ERDD 77 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~ 77 (522)
.++|+|||+|.+|+-+|..| . +.+|+++++.+.+-- .. .... .+..|...-.|..++.. ....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p--~~--~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP--AD--DSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB--CC--CCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC--cc--CCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 46899999999999999999 4 889999999865310 00 0000 00000000000000000 0000
Q ss_pred --CCCCChHHHHHH-----HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC-e
Q 041145 78 --ASFPSHVELLDY-----LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ-A 149 (522)
Q Consensus 78 --~~~~~~~~~~~y-----l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 149 (522)
..-.....+.+. .+.+..+.++ .+.++++|++++. + .+.|.|++++.. +
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~--~-------------------~~~~~v~~~~~~~g 359 (463)
T 3s5w_A 303 TNYSVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATA--T-------------------AQGIELALRDAGSG 359 (463)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEE--E-------------------TTEEEEEEEETTTC
T ss_pred cCCCcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEe--c-------------------CCEEEEEEEEcCCC
Confidence 000111111111 1111111345 6888999999987 3 346888887532 2
Q ss_pred -eEEEEECEEEEeeeccCCCCC--CCCCCCCCCccccCCceeeccccCCCchhhhhhccCCCeEEEECCC
Q 041145 150 -IQWYGFELLVMCIGKFGDIPR--MPAFPANKGEEIFGGKVLHSMDYSKLDKEAATELLEGKKVAIIGYR 216 (522)
Q Consensus 150 -~~~~~~d~vViAtG~~s~~p~--~p~~p~~~G~~~f~g~~~hs~~~~~~~~~~~~~~~~~k~V~VIG~G 216 (522)
.+++.+|.||+|||.. |+ .+-+. ++....|.+....+++... ......+|-++|..
T Consensus 360 ~~~~~~~D~Vv~AtG~~---p~~~~~~l~---~l~~~~g~i~v~~~~~~~~-----~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 360 ELSVETYDAVILATGYE---RQLHRQLLE---PLAEYLGDHEIGRDYRLQT-----DERCKVAIYAQGFS 418 (463)
T ss_dssp CEEEEEESEEEECCCEE---CCC-CTTTG---GGGGGBC--CCCTTSBCCB-----CTTBCSEEEESSCC
T ss_pred CeEEEECCEEEEeeCCC---CCCccchhH---HHHHHhCCcccCccccccc-----CCCCCCeEEEcCCC
Confidence 4569999999999965 44 33344 4443325555555555321 11124578888863
No 179
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.19 E-value=6.2e-06 Score=84.68 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+. +.+ ..++.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~~--~~~~~~ 212 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL--------------------------------PSF--DPMISE 212 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TTS--CHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh--------------------------------hhh--hHHHHH
Confidence 46899999999999999999 899999999975431 111 235677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+..++.++ .+.++++|++++. ++ ++...|++.+++ ++.+|.||+|+|..
T Consensus 213 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~g~---~i~~D~vv~a~G~~--- 264 (450)
T 1ges_A 213 TLVEVMNAEGP--QLHTNAIPKAVVK--NT------------------DGSLTLELEDGR---SETVDCLIWAIGRE--- 264 (450)
T ss_dssp HHHHHHHHHSC--EEECSCCEEEEEE--CT------------------TSCEEEEETTSC---EEEESEEEECSCEE---
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEE--eC------------------CcEEEEEECCCc---EEEcCEEEECCCCC---
Confidence 77777888888 7899999999986 31 223567766553 78999999999954
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 265 p~~~ 268 (450)
T 1ges_A 265 PAND 268 (450)
T ss_dssp ESCT
T ss_pred cCCC
Confidence 5553
No 180
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=2.4e-05 Score=81.36 Aligned_cols=101 Identities=21% Similarity=0.359 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 221 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--------------------------------RK--FDESVIN 221 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--------------------------------cc--cchhhHH
Confidence 35899999999999999999 799999999976431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+....++.++ .+.++++|++++. +. ++...|++.+++ ..+.+|.||+|+|. .
T Consensus 222 ~l~~~l~~~gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~g~--~~~~~D~vi~a~G~---~ 274 (500)
T 1onf_A 222 VLENDMKKNNI--NIVTFADVVEIKK--VS------------------DKNLSIHLSDGR--IYEHFDHVIYCVGR---S 274 (500)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEE--SS------------------TTCEEEEETTSC--EEEEESEEEECCCB---C
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEE--cC------------------CceEEEEECCCc--EEEECCEEEECCCC---C
Confidence 77888888888 7899999999986 31 123566665553 13899999999994 4
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 275 p~~~ 278 (500)
T 1onf_A 275 PDTE 278 (500)
T ss_dssp CTTT
T ss_pred cCCC
Confidence 6653
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.16 E-value=4.8e-06 Score=85.49 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|++|+.+|..| .|.+|+++|+.+.+. +.+ ...++.+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~~-~~~~~~~ 195 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL--------------------------------GVY-LDKEFTD 195 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------------TTT-CCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc--------------------------------ccc-CCHHHHH
Confidence 56999999999999999999 899999999976431 101 1246777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++...+++.++ .+.++++|++++. +. ..+.|.+ ++. ++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~gv--~i~~~~~v~~i~~--~~-------------------~v~~v~~-~~~---~i~~d~vi~a~G~~--- 245 (447)
T 1nhp_A 196 VLTEEMEANNI--TIATGETVERYEG--DG-------------------RVQKVVT-DKN---AYDADLVVVAVGVR--- 245 (447)
T ss_dssp HHHHHHHTTTE--EEEESCCEEEEEC--SS-------------------BCCEEEE-SSC---EEECSEEEECSCEE---
T ss_pred HHHHHHHhCCC--EEEcCCEEEEEEc--cC-------------------cEEEEEE-CCC---EEECCEEEECcCCC---
Confidence 88888888888 7889999999875 21 1223544 332 78999999999954
Q ss_pred CCCCCCC
Q 041145 169 PRMPAFP 175 (522)
Q Consensus 169 p~~p~~p 175 (522)
|+.+.++
T Consensus 246 p~~~~~~ 252 (447)
T 1nhp_A 246 PNTAWLK 252 (447)
T ss_dssp ESCGGGT
T ss_pred CChHHHH
Confidence 6654333
No 182
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.15 E-value=1.3e-05 Score=85.30 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC--CCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH--YDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g--~~v~v~e~~~~~G 45 (522)
..||+|||||++|+++|..| .| .+|+|+|+....+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~ 43 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMR 43 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCC
Confidence 45999999999999999999 68 9999999986543
No 183
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.14 E-value=9.9e-07 Score=91.98 Aligned_cols=39 Identities=31% Similarity=0.405 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
|+|||||||++||+||..| .|++|+|+|+++.+||....
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t 42 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYV 42 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEE
Confidence 3899999999999999999 89999999999999996543
No 184
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.12 E-value=1e-05 Score=83.77 Aligned_cols=104 Identities=23% Similarity=0.336 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+. + .-..++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~--~~~~~~~~ 228 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG--------------------------------A--SMDGEVAK 228 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------S--SSCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc--------------------------------c--ccCHHHHH
Confidence 46899999999999999999 899999999986532 1 01246777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~s 166 (522)
++.+..++.++ .+.++++|++++... + .+.+.|++.+ .++..++.+|.||+|+|..
T Consensus 229 ~l~~~l~~~gv--~i~~~~~v~~i~~~~--~-----------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~- 286 (478)
T 1v59_A 229 ATQKFLKKQGL--DFKLSTKVISAKRND--D-----------------KNVVEIVVEDTKTNKQENLEAEVLLVAVGRR- 286 (478)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEEET--T-----------------TTEEEEEEEETTTTEEEEEEESEEEECSCEE-
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEec--C-----------------CCeEEEEEEEcCCCCceEEECCEEEECCCCC-
Confidence 88888888888 789999999997511 1 2335566653 1113478999999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 287 --p~~~ 290 (478)
T 1v59_A 287 --PYIA 290 (478)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 6654
No 185
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.12 E-value=2e-06 Score=88.53 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=38.9
Q ss_pred cccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
|+..+||+|||||++||++|..| .|++|+|+|+++.+||.+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 33467999999999999999999 89999999999999998765
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.11 E-value=1.7e-05 Score=81.85 Aligned_cols=101 Identities=21% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 216 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL--------------------------------PN--EDADVSK 216 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEE-eCCeeEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVE-TNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~d~vViAtG~~s~ 167 (522)
++.+..++.++ .+.++++|++++. + .+...+++. +++ ..++.+|.||+|+|..
T Consensus 217 ~l~~~l~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~g~-~~~~~~D~vv~a~G~~-- 270 (464)
T 2a8x_A 217 EIEKQFKKLGV--TILTATKVESIAD--G-------------------GSQVTVTVTKDGV-AQELKAEKVLQAIGFA-- 270 (464)
T ss_dssp HHHHHHHHHTC--EEECSCEEEEEEE--C-------------------SSCEEEEEESSSC-EEEEEESEEEECSCEE--
T ss_pred HHHHHHHHcCC--EEEeCcEEEEEEE--c-------------------CCeEEEEEEcCCc-eEEEEcCEEEECCCCC--
Confidence 78888888888 7999999999986 3 123456554 332 3478999999999954
Q ss_pred CCCCC
Q 041145 168 IPRMP 172 (522)
Q Consensus 168 ~p~~p 172 (522)
|+..
T Consensus 271 -p~~~ 274 (464)
T 2a8x_A 271 -PNVE 274 (464)
T ss_dssp -ECCS
T ss_pred -ccCC
Confidence 6553
No 187
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.10 E-value=3.2e-06 Score=86.09 Aligned_cols=43 Identities=35% Similarity=0.554 Sum_probs=38.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC-CCcEEEccCCCCCcccCCCcc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH-YDPLVFEATNSIGGVWKHCSF 53 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~~~GG~w~~~~~ 53 (522)
.++|+|||||++||+||..| .| ++|+|+|+++.+||.+.....
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~ 51 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNY 51 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCC
Confidence 45999999999999999999 88 899999999999998775333
No 188
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.10 E-value=1.2e-05 Score=81.54 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=76.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+- + -....++.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l--------------------------------~-~~~~~~~~~ 198 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL--------------------------------A-RVAGEALSE 198 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------------T-TTSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh--------------------------------h-hhcCHHHHH
Confidence 46899999999999999999 899999999975431 0 012356788
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++....++.++ .++++++|+++.. +. .....|++.+++ ++.+|.||+|+|..
T Consensus 199 ~l~~~l~~~GV--~i~~~~~v~~i~~--~~------------------~~v~~v~l~dG~---~i~aD~Vv~a~G~~--- 250 (415)
T 3lxd_A 199 FYQAEHRAHGV--DLRTGAAMDCIEG--DG------------------TKVTGVRMQDGS---VIPADIVIVGIGIV--- 250 (415)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEE--SS------------------SBEEEEEESSSC---EEECSEEEECSCCE---
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEe--cC------------------CcEEEEEeCCCC---EEEcCEEEECCCCc---
Confidence 88888888888 7899999999986 21 112246666664 79999999999954
Q ss_pred CCC
Q 041145 169 PRM 171 (522)
Q Consensus 169 p~~ 171 (522)
|+.
T Consensus 251 p~~ 253 (415)
T 3lxd_A 251 PCV 253 (415)
T ss_dssp ESC
T ss_pred cCh
Confidence 554
No 189
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.09 E-value=2.1e-05 Score=81.38 Aligned_cols=104 Identities=21% Similarity=0.334 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+.. .. -..++.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 224 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-------------------------------VG--IDMEISK 224 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-------------------------------SS--CCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-------------------------------cc--cCHHHHH
Confidence 46899999999999999999 8999999999764310 01 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~s 166 (522)
++.+..++.++ .+.++++|++++. +. .+...|++.+ ..+..++.+|.||+|+|..
T Consensus 225 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~- 281 (474)
T 1zmd_A 225 NFQRILQKQGF--KFKLNTKVTGATK--KS------------------DGKIDVSIEAASGGKAEVITCDVLLVCIGRR- 281 (474)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEE--CT------------------TSCEEEEEEETTSCCCEEEEESEEEECSCEE-
T ss_pred HHHHHHHHCCC--EEEeCceEEEEEE--cC------------------CceEEEEEEecCCCCceEEEcCEEEECcCCC-
Confidence 88888888888 7999999999987 31 1225566542 1112478999999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 282 --p~~~ 285 (474)
T 1zmd_A 282 --PFTK 285 (474)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 5543
No 190
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.09 E-value=2.2e-05 Score=81.19 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=77.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 225 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL--------------------------------PA--VDEQVAK 225 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+....++.++ .+.++++|++++. + .+...|++.++++.+++.+|.||+|+|..
T Consensus 226 ~l~~~l~~~Gv--~v~~~~~v~~i~~--~-------------------~~~~~v~~~~~~g~~~~~~D~vi~a~G~~--- 279 (476)
T 3lad_A 226 EAQKILTKQGL--KILLGARVTGTEV--K-------------------NKQVTVKFVDAEGEKSQAFDKLIVAVGRR--- 279 (476)
T ss_dssp HHHHHHHHTTE--EEEETCEEEEEEE--C-------------------SSCEEEEEESSSEEEEEEESEEEECSCEE---
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEE--c-------------------CCEEEEEEEeCCCcEEEECCEEEEeeCCc---
Confidence 77777888888 7889999999987 3 23456777655433578999999999954
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 280 p~~~ 283 (476)
T 3lad_A 280 PVTT 283 (476)
T ss_dssp ECCT
T ss_pred ccCC
Confidence 6554
No 191
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.09 E-value=2.9e-05 Score=83.23 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~ 44 (522)
..||+|||||.+|++||..| .|.+|+|+|+....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 46999999999999999999 79999999998754
No 192
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.08 E-value=2.2e-05 Score=80.55 Aligned_cols=99 Identities=16% Similarity=0.225 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .|.+|+++++.+.+. +.. -..++.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~~-~d~~~~~ 193 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL--------------------------------PKY-FDKEMVA 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TTT-CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc--------------------------------ccc-CCHHHHH
Confidence 46899999999999999999 899999999975431 110 1245777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+..++.++ .+.++++|++++. + +++..|++.++ ++.+|.||+|+|. .
T Consensus 194 ~l~~~l~~~GV--~i~~~~~v~~i~~--~-------------------~~~v~v~~~~g----~i~aD~Vv~A~G~---~ 243 (452)
T 3oc4_A 194 EVQKSLEKQAV--IFHFEETVLGIEE--T-------------------ANGIVLETSEQ----EISCDSGIFALNL---H 243 (452)
T ss_dssp HHHHHHHTTTE--EEEETCCEEEEEE--C-------------------SSCEEEEESSC----EEEESEEEECSCC---B
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEc--c-------------------CCeEEEEECCC----EEEeCEEEECcCC---C
Confidence 88888888888 7889999999986 2 23344555332 7999999999994 4
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 244 p~~~ 247 (452)
T 3oc4_A 244 PQLA 247 (452)
T ss_dssp CCCS
T ss_pred CChH
Confidence 6654
No 193
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.07 E-value=2.5e-06 Score=86.17 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--C-CCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R-HYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~-g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++||++|..| . |++|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 56999999999999999999 6 9999999999999999876
No 194
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.05 E-value=1.2e-05 Score=82.74 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+. +.+ ..++.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~~--~~~~~~ 211 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL--------------------------------FQF--DPLLSA 211 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TTS--CHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc--------------------------------ccc--CHHHHH
Confidence 45899999999999999999 899999999975431 111 235666
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+..++.++ .+.++++|++++. + .+...|++.+++ . ++.+|.||+|+|..
T Consensus 212 ~l~~~l~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~G~-~-~i~~D~vv~a~G~~--- 263 (463)
T 2r9z_A 212 TLAENMHAQGI--ETHLEFAVAALER--D-------------------AQGTTLVAQDGT-R-LEGFDSVIWAVGRA--- 263 (463)
T ss_dssp HHHHHHHHTTC--EEESSCCEEEEEE--E-------------------TTEEEEEETTCC-E-EEEESEEEECSCEE---
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEE--e-------------------CCeEEEEEeCCc-E-EEEcCEEEECCCCC---
Confidence 77777788888 7889999999986 2 123456665442 1 68999999999954
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 264 p~~~ 267 (463)
T 2r9z_A 264 PNTR 267 (463)
T ss_dssp ESCT
T ss_pred cCCC
Confidence 5553
No 195
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.05 E-value=1.2e-05 Score=81.21 Aligned_cols=97 Identities=21% Similarity=0.287 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. + -....++.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~--------------------------------~-~~~~~~~~~ 188 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM--------------------------------A-RVVTPEISS 188 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------------T-TTSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch--------------------------------h-hccCHHHHH
Confidence 46899999999999999999 899999999975431 0 012356778
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++....++.++ .++++++|.++...+ .....|++.+++ ++.+|.||+|+|..
T Consensus 189 ~l~~~l~~~GV--~i~~~~~v~~i~~~~--------------------~~v~~V~~~dG~---~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 189 YFHDRHSGAGI--RMHYGVRATEIAAEG--------------------DRVTGVVLSDGN---TLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEEET--------------------TEEEEEEETTSC---EEECSEEEECCCEE
T ss_pred HHHHHHHhCCc--EEEECCEEEEEEecC--------------------CcEEEEEeCCCC---EEEcCEEEECcCCc
Confidence 88888888888 788999999987621 112235665554 79999999999955
No 196
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.05 E-value=2.1e-06 Score=89.88 Aligned_cols=40 Identities=43% Similarity=0.647 Sum_probs=36.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC-CCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH-YDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||+||..| .| ++|+|+|+++.+||.+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 56999999999999999999 88 999999999999997754
No 197
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.8e-05 Score=81.67 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=76.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. + ....++.+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--------------------------------~--~~~~~~~~ 222 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV--------------------------------P--TMDAEIRK 222 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------T--TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------c--cccHHHHH
Confidence 46899999999999999999 799999999976431 1 11246677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-Ce-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-QA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vViAtG~~s 166 (522)
++.+..++.++ .+.++++|.+++. + .+...|++.+. ++ ..++.+|.||+|+|..
T Consensus 223 ~l~~~l~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~- 278 (470)
T 1dxl_A 223 QFQRSLEKQGM--KFKLKTKVVGVDT--S-------------------GDGVKLTVEPSAGGEQTIIEADVVLVSAGRT- 278 (470)
T ss_dssp HHHHHHHHSSC--CEECSEEEEEEEC--S-------------------SSSEEEEEEESSSCCCEEEEESEEECCCCEE-
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEE--c-------------------CCeEEEEEEecCCCcceEEECCEEEECCCCC-
Confidence 88888888888 7999999999976 3 22355666531 11 2478999999999955
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 279 --p~~~ 282 (470)
T 1dxl_A 279 --PFTS 282 (470)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 5543
No 198
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.03 E-value=3.6e-05 Score=79.86 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 219 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA--------------------------------NL--QDEEMKR 219 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--------------------------------TC--CCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 899999999986531 11 1235666
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~s~ 167 (522)
.+....++. + .+.++++|.+++. + .++..|++.+.++ ..++.+|.||+|+|.
T Consensus 220 ~l~~~l~~~-V--~i~~~~~v~~i~~--~-------------------~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~--- 272 (492)
T 3ic9_A 220 YAEKTFNEE-F--YFDAKARVISTIE--K-------------------EDAVEVIYFDKSGQKTTESFQYVLAATGR--- 272 (492)
T ss_dssp HHHHHHHTT-S--EEETTCEEEEEEE--C-------------------SSSEEEEEECTTCCEEEEEESEEEECSCC---
T ss_pred HHHHHHhhC-c--EEEECCEEEEEEE--c-------------------CCEEEEEEEeCCCceEEEECCEEEEeeCC---
Confidence 666666654 5 6888999999987 3 2344566653222 357999999999994
Q ss_pred CCCCC
Q 041145 168 IPRMP 172 (522)
Q Consensus 168 ~p~~p 172 (522)
.|+..
T Consensus 273 ~p~~~ 277 (492)
T 3ic9_A 273 KANVD 277 (492)
T ss_dssp EESCS
T ss_pred ccCCC
Confidence 46654
No 199
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.02 E-value=1.3e-05 Score=82.01 Aligned_cols=108 Identities=19% Similarity=0.106 Sum_probs=71.3
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhh
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSI 287 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 287 (522)
++|+|||||.+|+.+|..|++.... +.+||++.+++....... ...
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g~~Vtlie~~~~~~~~~~-------~~~------------------------- 50 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--GHEVTLISANDYFQFVPS-------NPW------------------------- 50 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--GSEEEEECSSSEEECGGG-------HHH-------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--cCEEEEEeCCCCCcccCC-------ccc-------------------------
Confidence 7899999999999999999982110 245999999886432210 000
Q ss_pred hhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecC--cEEecCC
Q 041145 288 LSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSG--GIEFEDK 365 (522)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~--~v~~~dG 365 (522)
.. .... ....+...+.+.+++.+|+++.+.+.+++.+ .|.+++|
T Consensus 51 ------~~--------~g~~--------------------~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g 96 (437)
T 3sx6_A 51 ------VG--------VGWK--------------------ERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADG 96 (437)
T ss_dssp ------HH--------HTSS--------------------CHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTS
T ss_pred ------cc--------cCcc--------------------CHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC
Confidence 00 0000 0000112233445566788888778888764 5888999
Q ss_pred ceeeccEEEEeccCCCCc
Q 041145 366 SKLEADVVLLATGYDGKK 383 (522)
Q Consensus 366 ~~~~~D~VI~ATG~~~~~ 383 (522)
+++.+|.||+|||.++..
T Consensus 97 ~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 97 NTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp CEEECSEEEECCCCEECG
T ss_pred CEEECCEEEECCCCCcCc
Confidence 889999999999998763
No 200
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.02 E-value=1.8e-05 Score=82.10 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=76.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--C---CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R---HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++|+|||+|+.|+.+|..| . |.+|+++|+.+.+. +. -..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~ 232 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL--------------------------------RG--FDSE 232 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS--------------------------------TT--SCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc--------------------------------cc--cCHH
Confidence 36899999999999999999 6 99999999976431 11 1245
Q ss_pred HHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 86 LLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 86 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+.+.+.+.+++.++ .+.++++|++++. +. .+...|++.+++ ++.+|.||+|+|..
T Consensus 233 ~~~~l~~~l~~~GV--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~G~---~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 233 LRKQLTEQLRANGI--NVRTHENPAKVTK--NA------------------DGTRHVVFESGA---EADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHTTE--EEEETCCEEEEEE--CT------------------TSCEEEEETTSC---EEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCC--EEEeCCEEEEEEE--cC------------------CCEEEEEECCCc---EEEcCEEEEccCCC
Confidence 67778888888888 7899999999987 31 234567665553 78999999999954
Q ss_pred CCCCCCC
Q 041145 166 GDIPRMP 172 (522)
Q Consensus 166 s~~p~~p 172 (522)
|+..
T Consensus 288 ---p~~~ 291 (490)
T 1fec_A 288 ---PRSQ 291 (490)
T ss_dssp ---ESCT
T ss_pred ---cCcc
Confidence 5553
No 201
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.02 E-value=1.9e-05 Score=82.04 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--C---CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R---HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVE 85 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++|+|||+|+.|+.+|..| . |.+|+++++.+.+. +. -..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~ 236 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--------------------------------RG--FDET 236 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--------------------------------TT--SCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--------------------------------cc--cCHH
Confidence 36899999999999999999 6 99999999975431 11 1235
Q ss_pred HHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 86 LLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 86 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+.+.+.+..++.++ .+.++++|++++. +. ++...|++.+++ ++.+|.||+|+|..
T Consensus 237 ~~~~l~~~l~~~GV--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~G~---~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 237 IREEVTKQLTANGI--EIMTNENPAKVSL--NT------------------DGSKHVTFESGK---TLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHTTC--EEEESCCEEEEEE--CT------------------TSCEEEEETTSC---EEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCC--EEEeCCEEEEEEE--cC------------------CceEEEEECCCc---EEEcCEEEECCCCc
Confidence 67777777888888 7899999999986 31 233567766553 79999999999954
Q ss_pred CCCCCCC
Q 041145 166 GDIPRMP 172 (522)
Q Consensus 166 s~~p~~p 172 (522)
|+..
T Consensus 292 ---p~~~ 295 (495)
T 2wpf_A 292 ---PRTN 295 (495)
T ss_dssp ---ECCG
T ss_pred ---cccc
Confidence 6653
No 202
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.01 E-value=2.1e-05 Score=81.32 Aligned_cols=96 Identities=22% Similarity=0.246 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--C-CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--R-HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELL 87 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~-g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (522)
.++|+|||+|+.|+.+|..| . |.+|+++++.+.+. +. ....++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~ 205 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM--------------------------------PG-FTSKSLS 205 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS--------------------------------TT-TSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc--------------------------------cc-ccCHHHH
Confidence 46899999999999999999 6 99999999975421 10 1124677
Q ss_pred HHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 88 DYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 88 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
+.+....++.++ .+.++++|++++. + +++..|.+.+++ ++.+|.||+|+|..
T Consensus 206 ~~l~~~l~~~GV--~i~~~~~v~~i~~--~-------------------~~~v~v~~~~g~---~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 206 QMLRHDLEKNDV--VVHTGEKVVRLEG--E-------------------NGKVARVITDKR---TLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHTTC--EEECSCCEEEEEE--S-------------------SSBEEEEEESSC---EEECSEEEECSCEE
T ss_pred HHHHHHHHhcCC--EEEeCCEEEEEEc--c-------------------CCeEEEEEeCCC---EEEcCEEEECCCCC
Confidence 788888888888 7889999999976 3 234557776664 79999999999954
No 203
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.01 E-value=3.2e-05 Score=80.30 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=76.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++++.+.+. +. -..++.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 243 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL--------------------------------GG--MDGEVAK 243 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------SS--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC-e-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ-A-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~~~~d~vViAtG~~s 166 (522)
.+....++.++ .+.++++|++++. + .+...|++.+.. + .+++.+|.||+|+|..
T Consensus 244 ~l~~~l~~~gV--~v~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~- 299 (491)
T 3urh_A 244 QLQRMLTKQGI--DFKLGAKVTGAVK--S-------------------GDGAKVTFEPVKGGEATTLDAEVVLIATGRK- 299 (491)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEE--E-------------------TTEEEEEEEETTSCCCEEEEESEEEECCCCE-
T ss_pred HHHHHHHhCCC--EEEECCeEEEEEE--e-------------------CCEEEEEEEecCCCceEEEEcCEEEEeeCCc-
Confidence 77777888888 7889999999987 2 234567776522 2 3578999999999944
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 300 --p~~~ 303 (491)
T 3urh_A 300 --PSTD 303 (491)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 6554
No 204
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.01 E-value=1.8e-05 Score=80.65 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=72.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ....++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 195 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL--------------------------------ER-VTAPPVSA 195 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------------TT-TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc--------------------------------cc-hhhHHHHH
Confidence 46899999999999999999 899999999975421 00 11345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++....++.++ .+.++++|++++... ++ .....|++.++. ++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~GV--~i~~~~~v~~i~~~~-~~-----------------~~v~~v~~~~G~---~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 196 FYEHLHREAGV--DIRTGTQVCGFEMST-DQ-----------------QKVTAVLCEDGT---RLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEECT-TT-----------------CCEEEEEETTSC---EEECSEEEECCCEE
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEecc-CC-----------------CcEEEEEeCCCC---EEEcCEEEECCCCC
Confidence 77777888888 788999999987510 11 122356665553 78999999999954
No 205
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=2.8e-05 Score=80.25 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 219 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA--------------------------------PT--LDEDVTN 219 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245677
Q ss_pred HHHHHH-HhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYA-VHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~-~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~s 166 (522)
++.+.. ++.++ .+.++++|++++. + .+...|++.+.++ ..++.+|.||+|+|..
T Consensus 220 ~l~~~l~~~~gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~- 275 (468)
T 2qae_A 220 ALVGALAKNEKM--KFMTSTKVVGGTN--N-------------------GDSVSLEVEGKNGKRETVTCEALLVSVGRR- 275 (468)
T ss_dssp HHHHHHHHHTCC--EEECSCEEEEEEE--C-------------------SSSEEEEEECC---EEEEEESEEEECSCEE-
T ss_pred HHHHHHhhcCCc--EEEeCCEEEEEEE--c-------------------CCeEEEEEEcCCCceEEEECCEEEECCCcc-
Confidence 777777 88888 7899999999987 3 2235666652111 2478999999999955
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 276 --p~~~ 279 (468)
T 2qae_A 276 --PFTG 279 (468)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 5543
No 206
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.00 E-value=1.1e-05 Score=83.53 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+|+|+.+.+. +. -..++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 230 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM--------------------------------QG--ADRDLVK 230 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 799999999976431 11 1345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe-CCeeEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET-NQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~d~vViAtG~~s~ 167 (522)
++....++.++ .+.++++|.+++. + .+...|++.+ +++.+++.+|.||+|+|..
T Consensus 231 ~l~~~l~~~gV--~i~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~-- 285 (482)
T 1ojt_A 231 VWQKQNEYRFD--NIMVNTKTVAVEP--K-------------------EDGVYVTFEGANAPKEPQRYDAVLVAAGRA-- 285 (482)
T ss_dssp HHHHHHGGGEE--EEECSCEEEEEEE--E-------------------TTEEEEEEESSSCCSSCEEESCEEECCCEE--
T ss_pred HHHHHHHhcCC--EEEECCEEEEEEE--c-------------------CCeEEEEEeccCCCceEEEcCEEEECcCCC--
Confidence 77777888787 7889999999986 2 1234566664 1101257899999999954
Q ss_pred CCCC
Q 041145 168 IPRM 171 (522)
Q Consensus 168 ~p~~ 171 (522)
|+.
T Consensus 286 -p~~ 288 (482)
T 1ojt_A 286 -PNG 288 (482)
T ss_dssp -ECG
T ss_pred -cCC
Confidence 654
No 207
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.00 E-value=1.2e-05 Score=81.36 Aligned_cols=96 Identities=16% Similarity=0.269 Sum_probs=73.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+.. . .-..++.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------~--~~~~~~~~ 189 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-------------------------------R--VLGRRIGA 189 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-------------------------------H--HHCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-------------------------------h--hcCHHHHH
Confidence 46899999999999999999 8999999999754310 0 01245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++.+..++.++ .+.++++|.+++. + .....|++.+++ ++.+|.||+|+|..
T Consensus 190 ~l~~~l~~~GV--~i~~~~~v~~i~~--~-------------------~~~~~v~~~dg~---~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 190 WLRGLLTELGV--QVELGTGVVGFSG--E-------------------GQLEQVMASDGR---SFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEC--S-------------------SSCCEEEETTSC---EEECSEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEec--c-------------------CcEEEEEECCCC---EEEcCEEEEeeCCe
Confidence 78888888888 7889999999876 2 123357776664 79999999999965
No 208
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.00 E-value=1.4e-05 Score=82.44 Aligned_cols=93 Identities=8% Similarity=0.101 Sum_probs=72.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. + ...++.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~---~~~~~~~ 220 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--------------------------------R---EDPAIGE 220 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------T---SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--------------------------------C---CCHHHHH
Confidence 46899999999999999999 899999999975421 1 1245777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.+....++.++ .+.++++|++++. + .+.+.|.+. + .++.+|.||+|+|..
T Consensus 221 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~-------------------~~~~~v~~~-~---~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 221 AVTAAFRAEGI--EVLEHTQASQVAH--M-------------------DGEFVLTTT-H---GELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHTTC--EEETTCCEEEEEE--E-------------------TTEEEEEET-T---EEEEESEEEECSCEE
T ss_pred HHHHHHHhCCC--EEEcCCEEEEEEE--e-------------------CCEEEEEEC-C---cEEEcCEEEECCCCC
Confidence 88888888888 7889999999976 2 233455543 2 278999999999965
No 209
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.00 E-value=1.6e-05 Score=80.51 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=70.9
Q ss_pred CeEEEECCCCCHHHHHHHHHH---hcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHH
Q 041145 208 KKVAIIGYRKSAIDLAVECAE---ANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFL 284 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~---~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~ 284 (522)
++|+|||+|.+|+.+|..|++ .+ .+|+++.+++..........
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g-----~~V~vie~~~~~~~~~~~~~----------------------------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK-----ADVKVINKSRFSYFRPALPH----------------------------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG-----SEEEEEESSSEEEECCSSCC-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC-----CeEEEEeCCCCceeccchhh-----------------------------
Confidence 689999999999999999998 54 45999999886432211000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecC--cEEe
Q 041145 285 CSILSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSG--GIEF 362 (522)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~--~v~~ 362 (522)
...+.... ..+...+.+.+++.+|+++.+.+.+++.+ .|.+
T Consensus 48 -------------------------~~~~~~~~------------~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~ 90 (409)
T 3h8l_A 48 -------------------------VAIGVRDV------------DELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYY 90 (409)
T ss_dssp -------------------------CCSSCCCC------------CCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEE
T ss_pred -------------------------cccCCcCH------------HHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEE
Confidence 00000000 11122334555666788888888888764 5888
Q ss_pred cCCce----eeccEEEEeccCCCCc
Q 041145 363 EDKSK----LEADVVLLATGYDGKK 383 (522)
Q Consensus 363 ~dG~~----~~~D~VI~ATG~~~~~ 383 (522)
++|+. +++|.||+|||.++..
T Consensus 91 ~~g~~~~~~~~~d~lViAtG~~~~~ 115 (409)
T 3h8l_A 91 TKPDGSMAEEEYDYVIVGIGAHLAT 115 (409)
T ss_dssp ECTTSCEEEEECSEEEECCCCEECG
T ss_pred ccCCcccceeeCCEEEECCCCCcCc
Confidence 88864 8999999999998763
No 210
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.00 E-value=2.7e-05 Score=81.04 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 227 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL--------------------------------PY--EDADAAL 227 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS--------------------------------CC--SSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976431 11 1235777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+.+++.++ .+.++++|++++. + .++..|++.++. ++.+|.||+|+|..
T Consensus 228 ~l~~~l~~~GV--~i~~~~~V~~i~~--~-------------------~~~v~v~~~~g~---~i~aD~Vv~a~G~~--- 278 (499)
T 1xdi_A 228 VLEESFAERGV--RLFKNARAASVTR--T-------------------GAGVLVTMTDGR---TVEGSHALMTIGSV--- 278 (499)
T ss_dssp HHHHHHHHTTC--EEETTCCEEEEEE--C-------------------SSSEEEEETTSC---EEEESEEEECCCEE---
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEE--e-------------------CCEEEEEECCCc---EEEcCEEEECCCCC---
Confidence 78888888888 7899999999986 3 223455543443 78999999999955
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+..
T Consensus 279 p~~~ 282 (499)
T 1xdi_A 279 PNTS 282 (499)
T ss_dssp ECCS
T ss_pred cCCC
Confidence 5553
No 211
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.99 E-value=2.1e-05 Score=81.41 Aligned_cols=101 Identities=14% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 230 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL--------------------------------RK--FDECIQN 230 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976431 11 1245667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+.+..++.++ .+.++++|++++. +++ .....|++.+++ +++.+|.||+|+|..
T Consensus 231 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~~~-----------------~~~~~v~~~~G~--~~i~~D~vv~a~G~~--- 284 (479)
T 2hqm_A 231 TITDHYVKEGI--NVHKLSKIVKVEK--NVE-----------------TDKLKIHMNDSK--SIDDVDELIWTIGRK--- 284 (479)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEE--CC------------------CCCEEEEETTSC--EEEEESEEEECSCEE---
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEE--cCC-----------------CcEEEEEECCCc--EEEEcCEEEECCCCC---
Confidence 77777788888 7899999999986 211 112456665442 379999999999954
Q ss_pred CCC
Q 041145 169 PRM 171 (522)
Q Consensus 169 p~~ 171 (522)
|+.
T Consensus 285 p~~ 287 (479)
T 2hqm_A 285 SHL 287 (479)
T ss_dssp ECC
T ss_pred Ccc
Confidence 555
No 212
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.99 E-value=2.1e-05 Score=79.67 Aligned_cols=92 Identities=18% Similarity=0.304 Sum_probs=71.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ....++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 191 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM--------------------------------SR-AAPATLAD 191 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TT-TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc--------------------------------cc-ccCHHHHH
Confidence 46899999999999999999 899999999976431 00 01245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++....++.++ .+.++++|++++ + . .|++.++. ++.+|.||+|+|..
T Consensus 192 ~l~~~l~~~GV--~i~~~~~v~~i~--~--------------------~---~v~~~~g~---~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 192 FVARYHAAQGV--DLRFERSVTGSV--D--------------------G---VVLLDDGT---RIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHTTC--EEEESCCEEEEE--T--------------------T---EEEETTSC---EEECSEEEECSCEE
T ss_pred HHHHHHHHcCc--EEEeCCEEEEEE--C--------------------C---EEEECCCC---EEEcCEEEECcCCC
Confidence 78888888888 788999999886 1 1 46665553 78999999999954
No 213
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.98 E-value=3.6e-06 Score=87.75 Aligned_cols=40 Identities=38% Similarity=0.678 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||++|..| .|++|+|+|+++.+||.+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 57999999999999999999 79999999999999998765
No 214
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.98 E-value=4.1e-06 Score=84.06 Aligned_cols=40 Identities=35% Similarity=0.508 Sum_probs=37.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
..+|+|||||++|+++|..| .|++|+|||+++.+||.|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 45899999999999999999 78999999999999999875
No 215
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.97 E-value=2.4e-05 Score=81.85 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++++|||||+.|+..|..+ .|.+|+|+++...+ +. ...++..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L---------------------------------~~--~D~ei~~ 267 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL---------------------------------RG--FDQQCAV 267 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS---------------------------------TT--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc---------------------------------cc--cchhHHH
Confidence 46899999999999999999 89999999875321 11 1346778
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+....++.++ .+..++.|..++.. .+...|.+.++. ++.+|.|++|+|. .
T Consensus 268 ~l~~~l~~~gi--~~~~~~~v~~~~~~---------------------~~~~~v~~~~~~---~~~~D~vLvAvGR---~ 318 (542)
T 4b1b_A 268 KVKLYMEEQGV--MFKNGILPKKLTKM---------------------DDKILVEFSDKT---SELYDTVLYAIGR---K 318 (542)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEEE---------------------TTEEEEEETTSC---EEEESEEEECSCE---E
T ss_pred HHHHHHHhhcc--eeecceEEEEEEec---------------------CCeEEEEEcCCC---eEEEEEEEEcccc---c
Confidence 88888888888 78889999998873 233445555543 6789999999994 4
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|++-
T Consensus 319 Pnt~ 322 (542)
T 4b1b_A 319 GDID 322 (542)
T ss_dssp ESCG
T ss_pred CCcc
Confidence 7664
No 216
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.95 E-value=6.1e-06 Score=82.72 Aligned_cols=40 Identities=28% Similarity=0.358 Sum_probs=37.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++|+++|..| .|.+|+|+|+++.+||.|..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 46999999999999999999 89999999999999999876
No 217
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.94 E-value=4e-05 Score=74.50 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+ .....+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------------------------------------~~~~~~~~ 188 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF------------------------------------RAEKILIK 188 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC------------------------------------CCCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc------------------------------------ccCHHHHH
Confidence 46899999999999999999 78899999986432 11234555
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC---CeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN---QAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~d~vViAtG~~ 165 (522)
.+...+++.++ .+.++++|+++.. +. .....|++.+. +...++.+|.||+|+|..
T Consensus 189 ~l~~~l~~~gv--~i~~~~~v~~i~~--~~------------------~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 189 RLMDKVENGNI--ILHTNRTLEEVTG--DQ------------------MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHTSSE--EEECSCEEEEEEE--CS------------------SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHhcccCCe--EEEcCceeEEEEc--CC------------------CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 66666677777 7888999999986 31 12223666542 123578999999999955
No 218
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.94 E-value=1.3e-05 Score=82.55 Aligned_cols=99 Identities=14% Similarity=0.173 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||++|+.+|..| .|.+|+|+|+.+.+. +. ...++.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 216 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL--------------------------------PT--YDSELTA 216 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 799999999986531 10 1245667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
++....++.++ .+.++++|++++. + . ..++..++ ...++.+|.||+|+|..
T Consensus 217 ~l~~~l~~~gv--~i~~~~~v~~i~~-~--------------------~--v~v~~~~G-~~~~i~~D~vv~a~G~~--- 267 (458)
T 1lvl_A 217 PVAESLKKLGI--ALHLGHSVEGYEN-G--------------------C--LLANDGKG-GQLRLEADRVLVAVGRR--- 267 (458)
T ss_dssp HHHHHHHHHTC--EEETTCEEEEEET-T--------------------E--EEEECSSS-CCCEECCSCEEECCCEE---
T ss_pred HHHHHHHHCCC--EEEECCEEEEEEe-C--------------------C--EEEEECCC-ceEEEECCEEEECcCCC---
Confidence 77777788888 7889999998864 1 1 23331122 12478999999999954
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+.+
T Consensus 268 p~~~ 271 (458)
T 1lvl_A 268 PRTK 271 (458)
T ss_dssp ECCS
T ss_pred cCCC
Confidence 6654
No 219
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.93 E-value=2.6e-05 Score=80.93 Aligned_cols=99 Identities=15% Similarity=0.330 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. .-..++.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 240 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL--------------------------------AG-YYDRDLTD 240 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------------TT-TSCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh--------------------------------hh-HHHHHHHH
Confidence 46899999999999999999 899999999975431 10 01345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+....++.++ .+.++++|++++. +. ....|.+ ++. ++.+|.||+|+|..
T Consensus 241 ~l~~~l~~~GV--~i~~~~~v~~i~~--~~-------------------~v~~v~~-~g~---~i~~D~Vi~a~G~~--- 290 (490)
T 2bc0_A 241 LMAKNMEEHGI--QLAFGETVKEVAG--NG-------------------KVEKIIT-DKN---EYDVDMVILAVGFR--- 290 (490)
T ss_dssp HHHHHHHTTTC--EEEETCCEEEEEC--SS-------------------SCCEEEE-SSC---EEECSEEEECCCEE---
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEc--CC-------------------cEEEEEE-CCc---EEECCEEEECCCCC---
Confidence 78888888888 7899999999875 21 1112444 333 78999999999954
Q ss_pred CCCC
Q 041145 169 PRMP 172 (522)
Q Consensus 169 p~~p 172 (522)
|+.+
T Consensus 291 p~~~ 294 (490)
T 2bc0_A 291 PNTT 294 (490)
T ss_dssp ECCG
T ss_pred cChH
Confidence 6554
No 220
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.93 E-value=3.5e-05 Score=79.88 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +.+ ..++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--------------------------------~~~--~~~~~~ 236 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL--------------------------------RNF--DYDLRQ 236 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TTS--CHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc--------------------------------ccc--CHHHHH
Confidence 46899999999999999999 899999999975431 111 245667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.+...+++.++ .+.++++|++++. + .+++.|++.+++ ++.+|.||+|+|..
T Consensus 237 ~l~~~l~~~Gv--~i~~~~~V~~i~~--~-------------------~~~v~v~~~~g~---~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 237 LLNDAMVAKGI--SIIYEATVSQVQS--T-------------------ENCYNVVLTNGQ---TICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHTC--EEESSCCEEEEEE--C-------------------SSSEEEEETTSC---EEEESEEEECCCEE
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEe--e-------------------CCEEEEEECCCc---EEEcCEEEEeeCCC
Confidence 77777788888 7889999999987 3 234567766653 79999999999965
No 221
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.93 E-value=3.1e-05 Score=79.51 Aligned_cols=99 Identities=19% Similarity=0.241 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. .-..++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 195 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL--------------------------------YK-YFDKEFTD 195 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT--------------------------------TT-TSCHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh--------------------------------hh-hhhhhHHH
Confidence 46899999999999999999 789999999975431 10 01245777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEE-EEEEeCCeeEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWE-VAVETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.+....++.++ .+.++++|++++. + +++.. +.+ ++ .++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~-------------------~~~v~~v~~-~g---~~i~~D~vv~a~G~~-- 246 (452)
T 2cdu_A 196 ILAKDYEAHGV--NLVLGSKVAAFEE--V-------------------DDEIITKTL-DG---KEIKSDIAILCIGFR-- 246 (452)
T ss_dssp HHHHHHHHTTC--EEEESSCEEEEEE--E-------------------TTEEEEEET-TS---CEEEESEEEECCCEE--
T ss_pred HHHHHHHHCCC--EEEcCCeeEEEEc--C-------------------CCeEEEEEe-CC---CEEECCEEEECcCCC--
Confidence 88888888888 7999999999975 2 12222 222 33 378999999999954
Q ss_pred CCCCC
Q 041145 168 IPRMP 172 (522)
Q Consensus 168 ~p~~p 172 (522)
|+.+
T Consensus 247 -p~~~ 250 (452)
T 2cdu_A 247 -PNTE 250 (452)
T ss_dssp -ECCG
T ss_pred -CCHH
Confidence 5543
No 222
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.93 E-value=6e-06 Score=86.52 Aligned_cols=40 Identities=35% Similarity=0.575 Sum_probs=36.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++||+||..| .|++|+|+|+++.+||....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 45899999999999999999 89999999999999997653
No 223
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.93 E-value=3.6e-05 Score=80.57 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=74.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
++|+|||+|..|+.+|..| .|.+|+++|+.+.+. +. ...++..+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~~ 260 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK--------------------------------LI--KDNETRAY 260 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------TC--CSHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--------------------------------cc--ccHHHHHH
Confidence 6899999999999999999 899999999976431 11 13456778
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCC---EEEEEEeCCeeEEEEECEEEEeeeccC
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPV---WEVAVETNQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~d~vViAtG~~s 166 (522)
+.+..++.++ .+.++++|++++. +. +++ +.|++.++ ..++.+|.||+|+|..
T Consensus 261 l~~~l~~~GV--~i~~~~~V~~i~~--~~------------------~~~v~~~~v~~~~G--~~~i~aD~Vv~A~G~~- 315 (523)
T 1mo9_A 261 VLDRMKEQGM--EIISGSNVTRIEE--DA------------------NGRVQAVVAMTPNG--EMRIETDFVFLGLGEQ- 315 (523)
T ss_dssp HHHHHHHTTC--EEESSCEEEEEEE--CT------------------TSBEEEEEEEETTE--EEEEECSCEEECCCCE-
T ss_pred HHHHHHhCCc--EEEECCEEEEEEE--cC------------------CCceEEEEEEECCC--cEEEEcCEEEECcCCc-
Confidence 8888888888 7999999999986 21 122 45555333 2268999999999954
Q ss_pred CCCCC
Q 041145 167 DIPRM 171 (522)
Q Consensus 167 ~~p~~ 171 (522)
|+.
T Consensus 316 --p~~ 318 (523)
T 1mo9_A 316 --PRS 318 (523)
T ss_dssp --ECC
T ss_pred --cCC
Confidence 554
No 224
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.90 E-value=2.8e-05 Score=83.26 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--C------CCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R------HYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~------g~~v~v~e~~~~~ 44 (522)
..||+|||||.|||+||..| . |.+|+|+|+....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 46999999999999999999 5 9999999997543
No 225
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.90 E-value=8.5e-05 Score=76.89 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=76.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.. + . +.+ ..++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~--------l------------------------~~~--d~~~~~ 231 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-V--------L------------------------RGF--DQQMAE 231 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-S--------S------------------------TTS--CHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-C--------C------------------------ccc--CHHHHH
Confidence 35899999999999999999 899999998842 1 0 111 346777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC-e-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ-A-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~~~~d~vViAtG~~s 166 (522)
.+....++.++ .+.++++|.+++..+ ++...|++.+++ + ..++.+|.||+|+|..
T Consensus 232 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~--------------------~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~- 288 (483)
T 3dgh_A 232 LVAASMEERGI--PFLRKTVPLSVEKQD--------------------DGKLLVKYKNVETGEESEDVYDTVLWAIGRK- 288 (483)
T ss_dssp HHHHHHHHTTC--CEEETEEEEEEEECT--------------------TSCEEEEEEETTTCCEEEEEESEEEECSCEE-
T ss_pred HHHHHHHhCCC--EEEeCCEEEEEEEcC--------------------CCcEEEEEecCCCCceeEEEcCEEEECcccc-
Confidence 78888888888 789999999998722 234567776653 2 4578999999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 289 --p~~~ 292 (483)
T 3dgh_A 289 --GLVD 292 (483)
T ss_dssp --ECCG
T ss_pred --cCcC
Confidence 5543
No 226
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.90 E-value=0.0001 Score=76.45 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++...+ +.+ ..++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l---------------------------------~~~--d~~~~~ 229 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL---------------------------------RGF--DQQMSS 229 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------------------------------TTS--CHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc---------------------------------ccC--CHHHHH
Confidence 45899999999999999999 89999999985211 111 345777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCC-e-eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQ-A-IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~~~~d~vViAtG~~s 166 (522)
++....++.++ .+.++++|.+++... .+...|++.+.+ + ..++.+|.||+|+|..
T Consensus 230 ~l~~~l~~~gv--~~~~~~~v~~i~~~~--------------------~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~- 286 (488)
T 3dgz_A 230 LVTEHMESHGT--QFLKGCVPSHIKKLP--------------------TNQLQVTWEDHASGKEDTGTFDTVLWAIGRV- 286 (488)
T ss_dssp HHHHHHHHTTC--EEEETEEEEEEEECT--------------------TSCEEEEEEETTTTEEEEEEESEEEECSCEE-
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEcC--------------------CCcEEEEEEeCCCCeeEEEECCEEEEcccCC-
Confidence 88888888888 788999999998622 234567776632 2 3458899999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 287 --p~~~ 290 (488)
T 3dgz_A 287 --PETR 290 (488)
T ss_dssp --ESCG
T ss_pred --cccC
Confidence 6554
No 227
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.90 E-value=1.8e-05 Score=79.35 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=35.8
Q ss_pred hcccCcEEEEeCc-eeEEec--CcEEecCCceeeccEEEEeccCCCC
Q 041145 339 EAEKGNILFKRAS-KWWFWS--GGIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 339 ~l~~~~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+++.+|+++.+. +.+++. ..|.+++|+++.+|.||+|||.++.
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 3445688898875 888875 3588999999999999999998766
No 228
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.89 E-value=4.1e-05 Score=80.95 Aligned_cols=114 Identities=18% Similarity=0.271 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .|.+|+++++.+.+. + ....++..
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~--~~~~~~~~ 196 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM--------------------------------T--PVDREMAG 196 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC--------------------------------T--TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc--------------------------------h--hcCHHHHH
Confidence 35899999999999999999 899999999975421 1 11345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++....++.++ .+.++++|.+++...+... .....+.........++..+.+.+++ ++.+|.||+|+|..
T Consensus 197 ~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~g~---~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 197 FAHQAIRDQGV--DLRLGTALSEVSYQVQTHV--ASDAAGEDTAHQHIKGHLSLTLSNGE---LLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEEECCCCC--CCGGGTCCCTTCCTTCEEEEEETTSC---EEEESEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEeCCeEEEEeccccccc--cccccccccccccCCCcEEEEEcCCC---EEEcCEEEECcCCc
Confidence 77778888888 7889999999876211000 00000000000001334455554443 79999999999955
No 229
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.88 E-value=1e-05 Score=83.86 Aligned_cols=40 Identities=33% Similarity=0.512 Sum_probs=37.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC-CCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH-YDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||++|..| .| .+|+|+|+++.+||.|..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 46999999999999999999 67 799999999999999875
No 230
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.88 E-value=3.4e-05 Score=78.65 Aligned_cols=106 Identities=17% Similarity=0.075 Sum_probs=71.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCceeecCCCCCCcchHHHHHhHhhhhccCCCCchhHHHHHhhh
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWTLPSYRIWGLPFFLFYSTRSSQFLHPRPNLGFLRTFLCSI 287 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~~p~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 287 (522)
++|+|||+|..|+.+|..|++.+. +.+||++.+++....... ..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~---g~~Vtlie~~~~~~~~~~-------~~-------------------------- 46 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP---DLKITLISDRPYFGFTPA-------FP-------------------------- 46 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT---TCEEEEECSSSEEECGGG-------HH--------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCC---CCeEEEECCCCCCCcCCC-------cc--------------------------
Confidence 689999999999999999999432 356999999876332110 00
Q ss_pred hhhhHHHHHHHHHHHHhhcCCcccCCCCCCCccccccccccccccCcchhhhcccCcEEEEeCceeEEecC--cEEecCC
Q 041145 288 LSPMRKAISKFIESYLVWKLPLVKFGLKPDHPFEEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWSG--GIEFEDK 365 (522)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~v~~~~i~~~~~~--~v~~~dG 365 (522)
+ ....... ...+...+.+.+++.+|+++.+.+..++.+ .|.+++|
T Consensus 47 -----~--------~~~g~~~--------------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g 93 (430)
T 3h28_A 47 -----H--------LAMGWRK--------------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSG 93 (430)
T ss_dssp -----H--------HHHTCSC--------------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTC
T ss_pred -----h--------hccCccC--------------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCC
Confidence 0 0000000 001112223445566889888888888765 4888899
Q ss_pred ceeeccEEEEeccCCCC
Q 041145 366 SKLEADVVLLATGYDGK 382 (522)
Q Consensus 366 ~~~~~D~VI~ATG~~~~ 382 (522)
+++.+|.||+|||.++.
T Consensus 94 ~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 94 KKIEYDYLVIATGPKLV 110 (430)
T ss_dssp CEEECSEEEECCCCEEE
T ss_pred cEEECCEEEEcCCcccc
Confidence 88999999999999866
No 231
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.88 E-value=6.8e-06 Score=84.98 Aligned_cols=39 Identities=26% Similarity=0.542 Sum_probs=35.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC--CcEEEccCCCCCcccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY--DPLVFEATNSIGGVWKH 50 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~~~~GG~w~~ 50 (522)
+||+|||||++||++|.+| .|. +|+|+|+++.+||....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 4999999999999999999 788 99999999999987654
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.87 E-value=1.9e-05 Score=81.84 Aligned_cols=94 Identities=20% Similarity=0.299 Sum_probs=70.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 231 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG--------------------------------TI--YDGDMAE 231 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT--------------------------------SS--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh--------------------------------hc--CCHHHHH
Confidence 56899999999999999999 899999999975431 10 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++...+++.++ .+.++++|++++. + ...+.+.+. + .++.+|.||+|+|..
T Consensus 232 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~-------------------~~v~~v~~~-~---~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 232 YIYKEADKHHI--EILTNENVKAFKG--N-------------------ERVEAVETD-K---GTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEE--S-------------------SBEEEEEET-T---EEEECSEEEECSCEE
T ss_pred HHHHHHHHcCc--EEEcCCEEEEEEc--C-------------------CcEEEEEEC-C---CEEEcCEEEECcCCC
Confidence 78888888888 7888999999976 2 112234332 2 268999999999965
No 233
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.87 E-value=0.00012 Score=76.51 Aligned_cols=105 Identities=11% Similarity=0.139 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.. + . +.+ ..++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~--------l------------------------~~~--d~~~~~ 254 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-L--------L------------------------RGF--DQDMAN 254 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S--------S------------------------TTS--CHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-c--------c------------------------ccC--CHHHHH
Confidence 45799999999999999999 899999999842 1 0 111 346777
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe--eEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA--IQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~d~vViAtG~~s 166 (522)
.+....++.++ .+..+++++++....+.. .+...+++...++ ..++.+|.||+|+|..
T Consensus 255 ~~~~~l~~~GV--~v~~~~~v~~v~~~~~~~-----------------~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~- 314 (519)
T 3qfa_A 255 KIGEHMEEHGI--KFIRQFVPIKVEQIEAGT-----------------PGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD- 314 (519)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEEEEECCT-----------------TCEEEEEEEESSSSCEEEEEESEEEECSCEE-
T ss_pred HHHHHHHHCCC--EEEeCCeEEEEEEccCCC-----------------CceEEEEEEECCCcEEEEEECCEEEEecCCc-
Confidence 78788888888 788898888887632111 2344555544332 2467899999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+..
T Consensus 315 --p~~~ 318 (519)
T 3qfa_A 315 --ACTR 318 (519)
T ss_dssp --ESCS
T ss_pred --ccCC
Confidence 6554
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=2e-05 Score=78.47 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. + -..++.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~---~~~~~~~~ 188 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--------------------------------G---LDEELSNM 188 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT--------------------------------T---CCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec--------------------------------c---CCHHHHHH
Confidence 6899999999999999999 899999999976431 1 12467778
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCCC
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDIP 169 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~p 169 (522)
+.+..++.++ .+.++++|++++. + .|+++++ + +.+|.||+|+|.. |
T Consensus 189 l~~~l~~~gV--~i~~~~~v~~i~~--~-----------------------~v~~~~g---~-i~~D~vi~a~G~~---p 234 (367)
T 1xhc_A 189 IKDMLEETGV--KFFLNSELLEANE--E-----------------------GVLTNSG---F-IEGKVKICAIGIV---P 234 (367)
T ss_dssp HHHHHHHTTE--EEECSCCEEEECS--S-----------------------EEEETTE---E-EECSCEEEECCEE---E
T ss_pred HHHHHHHCCC--EEEcCCEEEEEEe--e-----------------------EEEECCC---E-EEcCEEEECcCCC---c
Confidence 8888888888 7888999988852 1 3555433 3 8999999999954 5
Q ss_pred CC
Q 041145 170 RM 171 (522)
Q Consensus 170 ~~ 171 (522)
+.
T Consensus 235 ~~ 236 (367)
T 1xhc_A 235 NV 236 (367)
T ss_dssp CC
T ss_pred CH
Confidence 54
No 235
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.86 E-value=7.8e-06 Score=84.52 Aligned_cols=40 Identities=30% Similarity=0.489 Sum_probs=36.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC--CCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH--YDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g--~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++||++|..| .| ++|+|+|+++.+||.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 56999999999999999999 67 999999999999997664
No 236
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.86 E-value=8.9e-06 Score=83.51 Aligned_cols=40 Identities=35% Similarity=0.499 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++||+||..| .|++|+|+|+++.+||.+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 45999999999999999999 89999999999999998764
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.85 E-value=4.4e-05 Score=79.27 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=71.2
Q ss_pred CCcEEEECCCHHHHHHHHHh------CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChH
Q 041145 11 SSKIGIIGAGISGIATAKQL------RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHV 84 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l------~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
.++|+|||||+.|+.+|..| .|.+|+++++.+.+.+ +.++ .
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-------------------------------~~l~--~ 226 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-------------------------------KILP--E 226 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-------------------------------TTSC--H
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-------------------------------ccCC--H
Confidence 46899999999999999998 2688999988643200 1122 4
Q ss_pred HHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeec
Q 041145 85 ELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGK 164 (522)
Q Consensus 85 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~ 164 (522)
++.+++....++.++ .++++++|++++. + .+...|++.+++ ++.+|.||+|+|.
T Consensus 227 ~~~~~~~~~l~~~GV--~v~~~~~V~~i~~--~-------------------~~~~~v~l~dG~---~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 227 YLSNWTMEKVRREGV--KVMPNAIVQSVGV--S-------------------SGKLLIKLKDGR---KVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHHTTTC--EEECSCCEEEEEE--E-------------------TTEEEEEETTSC---EEEESEEEECCCE
T ss_pred HHHHHHHHHHHhcCC--EEEeCCEEEEEEe--c-------------------CCeEEEEECCCC---EEECCEEEECCCC
Confidence 567777778888888 7889999999875 2 223456665553 7999999999996
Q ss_pred c
Q 041145 165 F 165 (522)
Q Consensus 165 ~ 165 (522)
.
T Consensus 281 ~ 281 (493)
T 1m6i_A 281 E 281 (493)
T ss_dssp E
T ss_pred C
Confidence 5
No 238
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.85 E-value=2.9e-05 Score=74.46 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=31.8
Q ss_pred CcEEEEeCceeEEecC----cEEecCCceeeccEEEEeccCCCC
Q 041145 343 GNILFKRASKWWFWSG----GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 343 ~~v~v~~~~i~~~~~~----~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
+++++..+.+.+++.+ .|.+++|+++.+|.||+|||..+.
T Consensus 70 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 70 PTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred CCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 3677777777777643 477889988999999999999865
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.84 E-value=0.00012 Score=71.60 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+ ....+..+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~------------------------------------~~~~~~~~ 195 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF------------------------------------RAHEASVK 195 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC------------------------------------CSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc------------------------------------CccHHHHH
Confidence 46899999999999999999 78899999987432 11134556
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-Ce-eEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-QA-IQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vViAtG~~ 165 (522)
.+....++.++ .+.++++|.+++. + .+...|++++. ++ ..++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~gv--~v~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 196 ELMKAHEEGRL--EVLTPYELRRVEG--D-------------------ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHTTSS--EEETTEEEEEEEE--S-------------------SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHhccccCCe--EEecCCcceeEcc--C-------------------CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 66666677777 7888999999986 2 12224666532 12 3578999999999955
No 240
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.84 E-value=5.4e-05 Score=77.27 Aligned_cols=94 Identities=14% Similarity=0.333 Sum_probs=71.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||+.|+.+|..+ .|.+|+++|+.+.+. +.+ ..++.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll--------------------------------~~~--d~~~~~ 192 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN--------------------------------KLM--DADMNQ 192 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS--------------------------------TTS--CGGGGH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc--------------------------------ccc--cchhHH
Confidence 35899999999999999999 899999999976531 111 123456
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeeccCCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKFGDI 168 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~s~~ 168 (522)
.+....++.++ .+.++++|.+++. + .+++++++ ++.+|.|++|+|..
T Consensus 193 ~~~~~l~~~gV--~i~~~~~v~~~~~--~-----------------------~v~~~~g~---~~~~D~vl~a~G~~--- 239 (437)
T 4eqs_A 193 PILDELDKREI--PYRLNEEINAING--N-----------------------EITFKSGK---VEHYDMIIEGVGTH--- 239 (437)
T ss_dssp HHHHHHHHTTC--CEEESCCEEEEET--T-----------------------EEEETTSC---EEECSEEEECCCEE---
T ss_pred HHHHHhhccce--EEEeccEEEEecC--C-----------------------eeeecCCe---EEeeeeEEEEecee---
Confidence 66777777888 7889999988754 2 36666664 78999999999954
Q ss_pred CCC
Q 041145 169 PRM 171 (522)
Q Consensus 169 p~~ 171 (522)
|+.
T Consensus 240 Pn~ 242 (437)
T 4eqs_A 240 PNS 242 (437)
T ss_dssp ESC
T ss_pred cCc
Confidence 664
No 241
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.83 E-value=8.9e-05 Score=76.65 Aligned_cols=103 Identities=15% Similarity=0.099 Sum_probs=75.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 232 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--------------------------------RS--FDSMIST 232 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--------------------------------cc--cCHHHHH
Confidence 36899999999999999999 899999999975431 11 1345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCC-CEEEEEEeCC-e-e--EEEEECEEEEeee
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHP-VWEVAVETNQ-A-I--QWYGFELLVMCIG 163 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~-~--~~~~~d~vViAtG 163 (522)
++....++.++ .+.++++|++++. +. ++ ...|.+.+.+ + . .++.+|.||+|+|
T Consensus 233 ~~~~~l~~~gv--~i~~~~~v~~i~~--~~------------------~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G 290 (478)
T 3dk9_A 233 NCTEELENAGV--EVLKFSQVKEVKK--TL------------------SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIG 290 (478)
T ss_dssp HHHHHHHHTTC--EEETTEEEEEEEE--CS------------------SSEEEEEEECCTTSCCEEEEEEEESEEEECSC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEE--cC------------------CCcEEEEEEccCCCCcccceEEEcCEEEEeec
Confidence 77888888888 7889999999986 31 12 2345554421 1 1 5789999999999
Q ss_pred ccCCCCCCC
Q 041145 164 KFGDIPRMP 172 (522)
Q Consensus 164 ~~s~~p~~p 172 (522)
.. |+..
T Consensus 291 ~~---p~~~ 296 (478)
T 3dk9_A 291 RV---PNTK 296 (478)
T ss_dssp EE---ESCT
T ss_pred cc---cCCC
Confidence 54 5554
No 242
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.82 E-value=1.3e-05 Score=83.21 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=36.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||+||..| .|++|+|||+++.+||.+..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 56999999999999999999 89999999999999996543
No 243
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.76 E-value=1.6e-05 Score=82.27 Aligned_cols=40 Identities=33% Similarity=0.661 Sum_probs=36.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++||++|..| .|++|+|+|+++.+||....
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 56999999999999999999 79999999999999997664
No 244
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.76 E-value=8.9e-05 Score=76.32 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++++|||+|+.|+.+|..+ .|.+|+++++.+.+. +. -..++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--------------------------------~~--~~~~~~~ 215 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--------------------------------SR--FDQDMRR 215 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999975431 11 1245677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEE-EEeCCeeEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVA-VETNQAIQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~d~vViAtG~~s~ 167 (522)
.+...+++.++ .+.++++|.+++. +. ++...|+ +.++ ++.+|.||+|+|..
T Consensus 216 ~l~~~l~~~Gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~~g----~i~aD~Vv~a~G~~-- 267 (463)
T 4dna_A 216 GLHAAMEEKGI--RILCEDIIQSVSA--DA------------------DGRRVATTMKHG----EIVADQVMLALGRM-- 267 (463)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEE--CT------------------TSCEEEEESSSC----EEEESEEEECSCEE--
T ss_pred HHHHHHHHCCC--EEECCCEEEEEEE--cC------------------CCEEEEEEcCCC----eEEeCEEEEeeCcc--
Confidence 77888888888 7889999999987 31 2234455 4433 38999999999955
Q ss_pred CCCCC
Q 041145 168 IPRMP 172 (522)
Q Consensus 168 ~p~~p 172 (522)
|+..
T Consensus 268 -p~~~ 271 (463)
T 4dna_A 268 -PNTN 271 (463)
T ss_dssp -ESCT
T ss_pred -cCCC
Confidence 5544
No 245
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.76 E-value=1.7e-05 Score=79.01 Aligned_cols=39 Identities=33% Similarity=0.417 Sum_probs=36.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
+||+|||||++|+++|..| .|++|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 3899999999999999999 79999999999999998765
No 246
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.75 E-value=9.2e-05 Score=79.35 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHhC------CCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQLR------HYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l~------g~~v~v~e~~~~ 43 (522)
..||+|||||++|++||..|. |.+|+|+|+...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 469999999999999999883 689999999864
No 247
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.73 E-value=1.7e-05 Score=82.44 Aligned_cols=39 Identities=28% Similarity=0.533 Sum_probs=36.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
++|+|||||++||+||..| .|++|+|+|+++.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 5999999999999999999 89999999999999997654
No 248
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.72 E-value=7.9e-05 Score=76.37 Aligned_cols=94 Identities=19% Similarity=0.232 Sum_probs=67.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. .-..++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 194 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL--------------------------------RR-SFDKEVTD 194 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------------TT-TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc--------------------------------hh-hcCHHHHH
Confidence 35899999999999999999 899999999976431 11 01245666
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.+.+..++. + .+.++++|.+++. + ++......++ .++.+|.||+|+|..
T Consensus 195 ~l~~~l~~~-v--~i~~~~~v~~i~~--~--------------------~~v~~v~~~g---~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 195 ILEEKLKKH-V--NLRLQEITMKIEG--E--------------------ERVEKVVTDA---GEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHTTT-S--EEEESCCEEEEEC--S--------------------SSCCEEEETT---EEEECSEEEECSCEE
T ss_pred HHHHHHHhC-c--EEEeCCeEEEEec--c--------------------CcEEEEEeCC---CEEECCEEEEeeCCc
Confidence 676666665 6 7888999998875 2 1111223333 378999999999954
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.72 E-value=7.4e-05 Score=74.19 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=66.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|.+|+.+|..| .|.+|+++++.+.+.. +.. . +...-...+.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~-------~~~-------------------d-~~~~~~~~~~~ 218 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND-------PDA-------------------D-PSVRLSPYTRQ 218 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------------CTTSCCHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC-------CCC-------------------C-CCccCCHHHHH
Confidence 45899999999999999999 7899999999754310 000 0 11112234556
Q ss_pred HHHHHHHhcC-CcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFD-VLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
++....++.+ + .+..+++|.+++. + .+...|++.+++ ....+|.||+|+|..
T Consensus 219 ~l~~~l~~~g~v--~~~~~~~v~~i~~--~-------------------~~~~~v~~~~g~--~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 219 RLGNVIKQGARI--EMNVHYTVKDIDF--N-------------------NGQYHISFDSGQ--SVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHTTCCE--EEECSCCEEEEEE--E-------------------TTEEEEEESSSC--CEEESSCCEECCCBC
T ss_pred HHHHHHhhCCcE--EEecCcEEEEEEe--c-------------------CCceEEEecCCe--EeccCCceEEeeccC
Confidence 6666666665 7 6788889999865 2 233456665553 223459999999943
No 250
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.72 E-value=7.3e-05 Score=79.45 Aligned_cols=93 Identities=20% Similarity=0.362 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 232 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM--------------------------------PP--IDYEMAA 232 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 899999999875431 11 1345677
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.+....++.++ .+.++++|.+++. +. + .|++.+++ ++.+|.||+|+|..
T Consensus 233 ~l~~~l~~~GV--~i~~~~~v~~i~~--~~-------------------~--~v~~~~g~---~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 233 YVHEHMKNHDV--ELVFEDGVDALEE--NG-------------------A--VVRLKSGS---VIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEG--GG-------------------T--EEEETTSC---EEECSEEEECSCEE
T ss_pred HHHHHHHHcCC--EEEECCeEEEEec--CC-------------------C--EEEECCCC---EEEcCEEEEccCCC
Confidence 77777888888 7888999999875 21 1 36665554 78999999999954
No 251
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.71 E-value=2.8e-05 Score=79.37 Aligned_cols=40 Identities=13% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||||++|+++|..| .|++|+|+|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 56999999999999999999 89999999999999998865
No 252
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.71 E-value=0.00013 Score=72.30 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=67.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. ...++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------~~~~~~~ 206 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ------------------------------------GHGKTAH 206 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS------------------------------------SCSHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC------------------------------------CCHHHHH
Confidence 46899999999999999999 788999999875320 0112344
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~ 165 (522)
.+....++.++ .+.++++|++++..+ .....|++...++ ..++.+|.||+|+|..
T Consensus 207 ~l~~~~~~~gv--~i~~~~~v~~i~~~~--------------------~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 207 EVERARANGTI--DVYLETEVASIEESN--------------------GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp SSHHHHHHTSE--EEESSEEEEEEEEET--------------------TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHhhcCce--EEEcCcCHHHhccCC--------------------CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 45555566666 688899999997621 1112355542222 3578999999999944
No 253
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.68 E-value=2.7e-05 Score=79.71 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=39.2
Q ss_pred ccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 7 HVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 7 ~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.|++.+||+|||+|.+|+++|..| .|.+|+++|+++.+||.+..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 345567999999999999999999 89999999999999998765
No 254
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.64 E-value=5e-05 Score=73.71 Aligned_cols=32 Identities=22% Similarity=0.129 Sum_probs=29.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
++|+|||+|.+|+-+|..|++.+.+ |+++.+.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~-----v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLK-----TLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHHCCCc-----EEEEecc
Confidence 5899999999999999999998654 9999986
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.62 E-value=0.00042 Score=73.72 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||||..|+.+|..| .|.+|+++++. .+ . +.+ ..++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~--------l------------------------~~~--d~~~~~ 330 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL--------L------------------------RGF--DQQMAE 330 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS--------S------------------------TTS--CHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC--------c------------------------CcC--CHHHHH
Confidence 45899999999999999999 89999999985 21 0 111 235667
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEc-----CCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEee
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHL-----GDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCI 162 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAt 162 (522)
++....++.++ .+.+++++.++... .+.. .++..+++...++ ...+.+|.||+|+
T Consensus 331 ~~~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~~~~-----------------~~~~~v~~~~~~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 331 KVGDYMENHGV--KFAKLCVPDEIKQLKVVDTENNK-----------------PGLLLVKGHYTDGKKFEEEFETVIFAV 391 (598)
T ss_dssp HHHHHHHHTTC--EEEETEEEEEEEEEECCBTTTTB-----------------CCEEEEEEEETTSCEEEEEESEEEECS
T ss_pred HHHHHHHhCCC--EEEECCeEEEEEeccccccccCC-----------------CceEEEEEEeCCCcEEeccCCEEEEEe
Confidence 77777777888 78889888887642 1100 2334454432222 2345699999999
Q ss_pred eccCCCCCC
Q 041145 163 GKFGDIPRM 171 (522)
Q Consensus 163 G~~s~~p~~ 171 (522)
|.. |+.
T Consensus 392 G~~---p~~ 397 (598)
T 2x8g_A 392 GRE---PQL 397 (598)
T ss_dssp CEE---ECG
T ss_pred CCc---ccc
Confidence 954 554
No 256
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.62 E-value=3.1e-05 Score=79.93 Aligned_cols=49 Identities=37% Similarity=0.666 Sum_probs=41.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCCCCCcccCCCccCccccc
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATNSIGGVWKHCSFNSTKLQ 59 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~ 59 (522)
.++|+|||||++|+++|..| .|+ +|+|+|+++.+||.|....+.+..++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d 55 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVE 55 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEe
Confidence 45899999999999999999 788 89999999999999876444444443
No 257
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.61 E-value=0.00016 Score=74.42 Aligned_cols=101 Identities=23% Similarity=0.326 Sum_probs=68.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +.+. ..++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~~~-d~~~~~ 218 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL--------------------------------ITLE-DQDIVN 218 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TTSC-CHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC--------------------------------CCCC-CHHHHH
Confidence 46899999999999999999 899999999975431 1110 234455
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeeccCC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKFGD 167 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~s~ 167 (522)
.+....+ + .+.++++|++++. +. .++..|++.+.++ ..++.+|.||+|+|..
T Consensus 219 ~l~~~l~---v--~i~~~~~v~~i~~--~~------------------~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~-- 271 (466)
T 3l8k_A 219 TLLSILK---L--NIKFNSPVTEVKK--IK------------------DDEYEVIYSTKDGSKKSIFTNSVVLAAGRR-- 271 (466)
T ss_dssp HHHHHHC---C--CEECSCCEEEEEE--EE------------------TTEEEEEECCTTSCCEEEEESCEEECCCEE--
T ss_pred HHHhcCE---E--EEEECCEEEEEEE--cC------------------CCcEEEEEEecCCceEEEEcCEEEECcCCC--
Confidence 5544333 4 6788999999876 21 1334566553122 3478999999999955
Q ss_pred CCCCC
Q 041145 168 IPRMP 172 (522)
Q Consensus 168 ~p~~p 172 (522)
|+..
T Consensus 272 -p~~~ 275 (466)
T 3l8k_A 272 -PVIP 275 (466)
T ss_dssp -ECCC
T ss_pred -cccc
Confidence 5554
No 258
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.60 E-value=3.5e-05 Score=80.09 Aligned_cols=39 Identities=31% Similarity=0.488 Sum_probs=36.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWK 49 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~ 49 (522)
.++|+|||||++||++|..| .|++|+|+|+++.+||.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 46999999999999999999 7999999999999999764
No 259
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.55 E-value=3.1e-05 Score=78.89 Aligned_cols=32 Identities=31% Similarity=0.563 Sum_probs=29.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||||++|+++|..| .|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 36999999999999999999 899999999975
No 260
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.51 E-value=0.00043 Score=67.32 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=63.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. . ...
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~-~~~--- 192 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-----------------------------------A-NKV--- 192 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-----------------------------------S-CHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-----------------------------------c-chH---
Confidence 46899999999999999999 788999999864320 0 111
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~ 165 (522)
+.+.+.++.++ .+.++++|+++.. + .....|.+++ .+...++.+|.||+|+|..
T Consensus 193 ~~~~l~~~~gv--~i~~~~~v~~i~~--~-------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 193 AQARAFANPKM--KFIWDTAVEEIQG--A-------------------DSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHTCTTE--EEECSEEEEEEEE--S-------------------SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhcCCc--eEecCCceEEEcc--C-------------------CcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 22233333466 6788999999976 3 1122466653 2213478999999999954
No 261
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.51 E-value=0.00059 Score=66.51 Aligned_cols=94 Identities=14% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+ .... .
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~------------------------------------~~~~---~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL------------------------------------RAST---I 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC------------------------------------CSCH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc------------------------------------CCCH---H
Confidence 46899999999999999999 78899999987532 0111 2
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC--CeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN--QAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~d~vViAtG~~ 165 (522)
+.+.+.++.++ .+.++++|.+++. +. .....|++.+. +...++.+|.||+|+|..
T Consensus 214 ~~~~l~~~~gv--~i~~~~~v~~i~~--~~------------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 214 MQKRAEKNEKI--EILYNTVALEAKG--DG------------------KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHCTTE--EEECSEEEEEEEE--SS------------------SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHhcCCe--EEeecceeEEEEc--cc------------------CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 22333343466 6888999999987 31 12234667662 213578999999999965
No 262
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.47 E-value=0.00043 Score=71.84 Aligned_cols=94 Identities=15% Similarity=0.232 Sum_probs=69.3
Q ss_pred cEEEECCCHHHHHHHHHh--C--------------CCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCC
Q 041145 13 KIGIIGAGISGIATAKQL--R--------------HYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERD 76 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--------------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (522)
+++|||||+.|+.+|..| . +.+|+++|+.+.+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 699999999999999877 1 25799999986541
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe---eEEE
Q 041145 77 DASFPSHVELLDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA---IQWY 153 (522)
Q Consensus 77 ~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~ 153 (522)
+.+ .+++.+++.+..++.|+ .++++++|++++. + ...+.....++ .+++
T Consensus 268 -~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~--~---------------------~~~~~~~~~dg~~~~~~i 319 (502)
T 4g6h_A 268 -NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEE--K---------------------QLLAKTKHEDGKITEETI 319 (502)
T ss_dssp -TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECS--S---------------------EEEEEEECTTSCEEEEEE
T ss_pred -cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeC--C---------------------ceEEEEEecCcccceeee
Confidence 222 35788889999999999 7999999999864 2 11223222222 3579
Q ss_pred EECEEEEeeecc
Q 041145 154 GFELLVMCIGKF 165 (522)
Q Consensus 154 ~~d~vViAtG~~ 165 (522)
.||.||.|+|..
T Consensus 320 ~ad~viwa~Gv~ 331 (502)
T 4g6h_A 320 PYGTLIWATGNK 331 (502)
T ss_dssp ECSEEEECCCEE
T ss_pred ccCEEEEccCCc
Confidence 999999999965
No 263
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.47 E-value=0.0005 Score=66.70 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=63.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+ .....+.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~------------------------------------~~~~~l~~ 198 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY------------------------------------MCENAYVQ 198 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC------------------------------------CSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc------------------------------------CCCHHHHH
Confidence 46899999999999999999 78899999986432 01122222
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~ 165 (522)
.+.+.++ .+.++++|+++.. +. ...-.|.+.+ .+...++.+|.||+|+|..
T Consensus 199 ----~l~~~gv--~i~~~~~v~~i~~--~~------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 199 ----EIKKRNI--PYIMNAQVTEIVG--DG------------------KKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ----HHHHTTC--CEECSEEEEEEEE--SS------------------SSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ----HHhcCCc--EEEcCCeEEEEec--CC------------------ceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 2335677 6888999999986 31 1112355553 2213468999999999955
No 264
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.44 E-value=0.00042 Score=66.87 Aligned_cols=98 Identities=10% Similarity=0.048 Sum_probs=65.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+. ...++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------~~~~~-- 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR------------------------------------CAPIT-- 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC------------------------------------SCHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC------------------------------------CCHHH--
Confidence 46899999999999999999 788999999865320 01112
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeeccC
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKFG 166 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~s 166 (522)
.+.+.++.++ .+.++++|+++...+ .+...|++.+ .+...++.+|.||+|+|..
T Consensus 185 -~~~l~~~~gv--~v~~~~~v~~i~~~~--------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~- 240 (311)
T 2q0l_A 185 -LEHAKNNDKI--EFLTPYVVEEIKGDA--------------------SGVSSLSIKNTATNEKRELVVPGFFIFVGYD- 240 (311)
T ss_dssp -HHHHHTCTTE--EEETTEEEEEEEEET--------------------TEEEEEEEEETTTCCEEEEECSEEEECSCEE-
T ss_pred -HHHHhhCCCe--EEEeCCEEEEEECCC--------------------CcEeEEEEEecCCCceEEEecCEEEEEecCc-
Confidence 2222233466 677889999987621 1112466653 2223478999999999954
Q ss_pred CCCCCC
Q 041145 167 DIPRMP 172 (522)
Q Consensus 167 ~~p~~p 172 (522)
|+.+
T Consensus 241 --p~~~ 244 (311)
T 2q0l_A 241 --VNNA 244 (311)
T ss_dssp --ECCG
T ss_pred --cChh
Confidence 5543
No 265
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.43 E-value=0.00072 Score=65.20 Aligned_cols=92 Identities=18% Similarity=0.243 Sum_probs=63.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|++|+.+|..| .+.+|+++++.+.+. ...
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------~~~---- 183 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------ADQ---- 183 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC------------------------------------SCH----
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC------------------------------------ccH----
Confidence 46899999999999999999 788999999875320 001
Q ss_pred HHHHHHHh-cCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCE-EEEEEeC-Ce-eEEEEECEEEEeeec
Q 041145 89 YLHGYAVH-FDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVW-EVAVETN-QA-IQWYGFELLVMCIGK 164 (522)
Q Consensus 89 yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-~~-~~~~~~d~vViAtG~ 164 (522)
.+....++ .++ .+.++++|+++.. + .++. .|++.+. ++ ..++.+|.||+|+|.
T Consensus 184 ~~~~~l~~~~gv--~v~~~~~v~~i~~--~-------------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 184 VLQDKLRSLKNV--DIILNAQTTEVKG--D-------------------GSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHTCTTE--EEESSEEEEEEEE--S-------------------SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCe--EEecCCceEEEEc--C-------------------CCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 12222333 466 6788899999976 3 1222 4666652 12 357899999999995
Q ss_pred c
Q 041145 165 F 165 (522)
Q Consensus 165 ~ 165 (522)
.
T Consensus 241 ~ 241 (310)
T 1fl2_A 241 L 241 (310)
T ss_dssp E
T ss_pred c
Confidence 4
No 266
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.42 E-value=8.1e-05 Score=80.16 Aligned_cols=40 Identities=40% Similarity=0.625 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||++|..| .|++|+|||+++.+||.+..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 46999999999999999999 89999999999999997654
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.40 E-value=0.00063 Score=66.36 Aligned_cols=96 Identities=17% Similarity=0.182 Sum_probs=64.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------~~~~~-- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR------------------------------------ASKIM-- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC------------------------------------SCHHH--
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC------------------------------------ccHHH--
Confidence 46899999999999999999 788999999875320 01111
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeC-Ce-eEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETN-QA-IQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~~~d~vViAtG~~ 165 (522)
.+...++.++ .+.++++|+++.. +.. +.....|.+.+. ++ ..++.+|.||+|+|..
T Consensus 201 -~~~~~~~~gv--~i~~~~~v~~i~~--~~~----------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 201 -QQRALSNPKI--DVIWNSSVVEAYG--DGE----------------RDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp -HHHHHTCTTE--EEECSEEEEEEEE--SSS----------------SSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred -HHHHHhCCCe--eEecCCceEEEeC--CCC----------------ccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 1233445566 6778999999986 310 001123666542 12 3578999999999955
No 268
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.40 E-value=0.00016 Score=72.31 Aligned_cols=50 Identities=18% Similarity=0.120 Sum_probs=38.3
Q ss_pred CcchhhhcccCcEEEEeCc-eeEEecC-cEEecCCceeeccEEEEeccCCCC
Q 041145 333 PENFFSEAEKGNILFKRAS-KWWFWSG-GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 333 ~~~~~~~l~~~~v~v~~~~-i~~~~~~-~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
...+.+.+.+.+|+++.+. +.+++.+ .|+++||+++.+|.||.|+|....
T Consensus 110 ~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 110 HDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccHH
Confidence 3445566666788998876 7777543 577889999999999999998763
No 269
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.39 E-value=0.00036 Score=67.30 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=27.6
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+|||+|+.|+-.|..+++.+. +|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~-----~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARK-----QIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-----CEEEEeCCC
Confidence 49999999999999999998765 499998753
No 270
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.38 E-value=0.0001 Score=80.98 Aligned_cols=40 Identities=40% Similarity=0.625 Sum_probs=36.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.++|+|||||++||++|..| .|++|+|||+.+.+||.+..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 46999999999999999999 89999999999999997653
No 271
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.37 E-value=0.00083 Score=65.26 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=65.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+ .......
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~------------------------------------~~~~~~~- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF------------------------------------RAHEHSV- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC------------------------------------SSCHHHH-
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC------------------------------------CccHHHH-
Confidence 46899999999999999999 77899999986432 1111111
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe--eEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA--IQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~d~vViAtG~~ 165 (522)
+ .+++.++ .+..+++|.++.. + .+...|++.+..+ ..++.+|.||+|+|..
T Consensus 197 --~-~l~~~gv--~~~~~~~v~~i~~--~-------------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 197 --E-NLHASKV--NVLTPFVPAELIG--E-------------------DKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp --H-HHHHSSC--EEETTEEEEEEEC--S-------------------SSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred --H-HHhcCCe--EEEeCceeeEEec--C-------------------CceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 1 1355677 6888899999876 2 1234577766322 4578999999999955
No 272
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.34 E-value=0.00014 Score=72.24 Aligned_cols=32 Identities=19% Similarity=0.481 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+||+|||||++|+++|.+| .|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 46999999999999999999 899999999975
No 273
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.00051 Score=67.22 Aligned_cols=93 Identities=18% Similarity=0.149 Sum_probs=63.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. . ...+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-----------------------------------~-~~~~-- 196 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-----------------------------------A-SKIM-- 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-----------------------------------S-CTTH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-----------------------------------c-cHHH--
Confidence 46899999999999999999 788999999875320 0 0011
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--CCeeEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--NQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~vViAtG~~ 165 (522)
.+.+.++.++ .+.++++|++++. +. +...|.+.+ .+...++.+|.||+|+|..
T Consensus 197 -~~~~~~~~gV--~v~~~~~v~~i~~--~~-------------------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 197 -LDRARNNDKI--RFLTNHTVVAVDG--DT-------------------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp -HHHHHHCTTE--EEECSEEEEEEEC--SS-------------------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred -HHHHhccCCc--EEEeCceeEEEec--CC-------------------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 1123345566 6778999999875 21 112355543 1113478999999999954
No 274
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.32 E-value=0.00025 Score=69.70 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=29.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+.+|..|++.+. +|+++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~-----~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGL-----SYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSC-----CEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----CEEEEECCCC
Confidence 479999999999999999999865 4999998763
No 275
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.31 E-value=0.00034 Score=72.61 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=31.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..++|+|||||.+|+.+|..|++.+. +|+++.+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~-----~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGA-----RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCC-----eEEEEEeccc
Confidence 46799999999999999999999864 5999998864
No 276
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.25 E-value=0.00016 Score=77.16 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=35.1
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCccc
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVW 48 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w 48 (522)
..+||+|||||++|+++|..| .|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 357999999999999999999 899999999998888765
No 277
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.21 E-value=0.00044 Score=74.81 Aligned_cols=97 Identities=11% Similarity=0.066 Sum_probs=66.7
Q ss_pred CCcEEEEC--CCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHH
Q 041145 11 SSKIGIIG--AGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVEL 86 (522)
Q Consensus 11 ~~~vvIIG--aG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (522)
.++|+||| +|..|+.+|..| .|.+|+++++.+.+.... .....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~---------------------------------~~~~~ 569 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT---------------------------------NNTFE 569 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG---------------------------------GGGTC
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc---------------------------------ccchh
Confidence 35799999 999999999999 899999999876542110 00112
Q ss_pred HHHHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 87 LDYLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 87 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
...+...+++.++ .+..+++|++++. + + -.++....++.+++.+|.||+|+|..
T Consensus 570 ~~~l~~~l~~~GV--~i~~~~~V~~i~~--~--------------------~-~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENGV--ARVTDHAVVAVGA--G--------------------G-VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTTC--EEEESEEEEEEET--T--------------------E-EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCCC--EEEcCcEEEEEEC--C--------------------e-EEEEEccCCeEEEEECCEEEECCCCC
Confidence 3455566677788 7899999999874 2 1 12322112223578999999999954
No 278
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.15 E-value=0.00016 Score=74.17 Aligned_cols=40 Identities=20% Similarity=0.071 Sum_probs=30.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHH-hcC-CCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAE-ANQ-GPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~-~~~-~~~~~~Vt~v~R~~~ 246 (522)
.++|+|||+|++|+.+|..|++ ... ...+.+|+++.+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 3689999999999999999998 611 000135999998864
No 279
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.15 E-value=0.00083 Score=67.42 Aligned_cols=51 Identities=14% Similarity=0.073 Sum_probs=37.7
Q ss_pred cCcchhhhcccC-cEEEEeCc-eeEEec--C----cEEecCCceeeccEEEEeccCCCC
Q 041145 332 LPENFFSEAEKG-NILFKRAS-KWWFWS--G----GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 332 ~~~~~~~~l~~~-~v~v~~~~-i~~~~~--~----~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
+...+.+.+++. +++++.+. +.+++. + .|+++||+++++|.||.|+|....
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 334455666665 89998876 777754 2 466789989999999999998653
No 280
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.15 E-value=0.001 Score=64.08 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=65.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHH
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLD 88 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (522)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+ .... .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~------------------------------------~~~~---~ 187 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF------------------------------------RAAP---S 187 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC------------------------------------BSCH---H
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC------------------------------------CCCH---H
Confidence 46899999999999999999 78899999987532 0011 2
Q ss_pred HHHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCe-eEEEEECEEEEeeecc
Q 041145 89 YLHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQA-IQWYGFELLVMCIGKF 165 (522)
Q Consensus 89 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~d~vViAtG~~ 165 (522)
+++...++.++ .+.++++|.++.. +. .....|++...++ ..++.+|.||+|+|..
T Consensus 188 ~~~~~~~~~gv--~~~~~~~v~~i~~--~~------------------~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 188 TVEKVKKNEKI--ELITSASVDEVYG--DK------------------MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHCTTE--EEECSCEEEEEEE--ET------------------TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHhcCCe--EEEeCcEEEEEEc--CC------------------CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 23344456666 6888999999976 21 1122355552222 3478899999999954
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.13 E-value=0.00073 Score=70.51 Aligned_cols=45 Identities=18% Similarity=0.153 Sum_probs=34.0
Q ss_pred hhcccCcEEEEeC-ceeEEecC-------cEEecCCceeeccEEEEeccCCCC
Q 041145 338 SEAEKGNILFKRA-SKWWFWSG-------GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 338 ~~l~~~~v~v~~~-~i~~~~~~-------~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
+.+++.+|+++.+ .+.++..+ .|.+++|+++.+|.||+|||..+.
T Consensus 275 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 275 AHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 3445667888888 47777531 277788988999999999998755
No 282
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.12 E-value=0.0014 Score=68.34 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=38.5
Q ss_pred cchhhhcccCcEEEEeCc-eeEEec--C---cEEecCCceeeccEEEEeccCCCC
Q 041145 334 ENFFSEAEKGNILFKRAS-KWWFWS--G---GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 334 ~~~~~~l~~~~v~v~~~~-i~~~~~--~---~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
..+.+.+++.+++++.+. +.++.. + +|.+.+|+++.+|.||+|||....
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 345566677789999886 777653 2 377889999999999999999884
No 283
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.10 E-value=0.0012 Score=67.66 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.++|+|||+|.+|+-+|..| .+.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999 8899999998754
No 284
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.00021 Score=72.30 Aligned_cols=47 Identities=11% Similarity=0.179 Sum_probs=35.0
Q ss_pred cchhhhcccCcEEEEeCc-eeEEec--Cc--EEecCCceeeccEEEEeccCCC
Q 041145 334 ENFFSEAEKGNILFKRAS-KWWFWS--GG--IEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 334 ~~~~~~l~~~~v~v~~~~-i~~~~~--~~--v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
+.+.+.+++.+|+++.+. +.++.. ++ |.+.+| ++.+|.||.|||-..
T Consensus 136 ~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 136 RMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 345566666789998876 777643 33 566677 799999999999886
No 285
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.05 E-value=0.00022 Score=70.37 Aligned_cols=31 Identities=32% Similarity=0.529 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHh--CC------CCcEEEccCCC
Q 041145 13 KIGIIGAGISGIATAKQL--RH------YDPLVFEATNS 43 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g------~~v~v~e~~~~ 43 (522)
||+|||||++|+++|..| .| .+|+|+|+...
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 899999999999999999 66 89999999863
No 286
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.02 E-value=0.001 Score=63.45 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=29.5
Q ss_pred CeEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEA-NQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~-~~~~~~~~Vt~v~R~~~ 246 (522)
..|+|||+|.+|+.+|..|++. +. +|+++.+.+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~-----~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNV-----QVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTS-----CEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCC-----eEEEEECCCC
Confidence 4799999999999999999985 54 5999998864
No 287
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.00 E-value=0.00032 Score=71.92 Aligned_cols=37 Identities=8% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.++|+|||+|.+|+.+|..|++.+. ..+|+++.+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~---~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHS---RAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS---SCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCC---CCCEEEEeCCCc
Confidence 4799999999999999999999862 146999998874
No 288
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.99 E-value=0.00058 Score=67.25 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI 44 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~ 44 (522)
+||+|||||++|+.+|..| .|.+|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 3899999999999999999 89999999998754
No 289
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.96 E-value=0.0027 Score=61.17 Aligned_cols=32 Identities=13% Similarity=0.288 Sum_probs=29.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||+|..|+-+|..| .|.+|+|+++.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 46899999999999999999 799999999853
No 290
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.90 E-value=0.0016 Score=62.88 Aligned_cols=31 Identities=32% Similarity=0.395 Sum_probs=27.5
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
.|+|||+|+.|+..|..+++.+. +|+++.+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~-----~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANL-----KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-----CEEEEecC
Confidence 49999999999999999999865 49999875
No 291
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.89 E-value=0.0017 Score=66.38 Aligned_cols=32 Identities=9% Similarity=0.019 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCC-cEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYD-PLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~-v~v~e~~~ 42 (522)
.++|+|||+|.+|+-+|..| .+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 56899999999999999999 6778 99999864
No 292
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.87 E-value=0.0015 Score=65.56 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~-----~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGV-----DVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-----CEEEEecCCC
Confidence 3689999999999999999999865 5999999875
No 293
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.85 E-value=0.0015 Score=69.09 Aligned_cols=47 Identities=17% Similarity=0.078 Sum_probs=35.4
Q ss_pred chhhhccc-CcEEEEeCceeEEe--cC---cEEecCCceeeccEEEEeccCCC
Q 041145 335 NFFSEAEK-GNILFKRASKWWFW--SG---GIEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 335 ~~~~~l~~-~~v~v~~~~i~~~~--~~---~v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
.+.+.+++ .+|++..+.+..+. ++ +|.+.+|.++.+|.||+|||-.+
T Consensus 129 ~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 129 AVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 44455666 68998877777774 33 46778898899999999999754
No 294
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.82 E-value=0.0034 Score=61.06 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=29.5
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-----~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-----QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-----cEEEEECCC
Confidence 479999999999999999999865 499999875
No 295
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.81 E-value=0.0036 Score=70.21 Aligned_cols=90 Identities=20% Similarity=0.178 Sum_probs=64.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCCCccCcccccCCCCCcccCCCCCCCCCCCCCCChHHHHHH
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKHCSFNSTKLQTPRCDFEFSDYPWPERDDASFPSHVELLDY 89 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 89 (522)
++|+|||+|+.|+.+|..| .|.+|+|+|+.+.+ . ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~------------------------------------~-~~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI------------------------------------S-AA----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC------------------------------------C-HH-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc------------------------------------c-hh-----
Confidence 6899999999999999999 78899999997532 0 01
Q ss_pred HHHHHHhcCCcCceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEe--C---Ce-eEEEEECEEEEeee
Q 041145 90 LHGYAVHFDVLKYIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVET--N---QA-IQWYGFELLVMCIG 163 (522)
Q Consensus 90 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~---~~-~~~~~~d~vViAtG 163 (522)
...+++.++ .+.+++.|+++.. +++ ...-.|++.+ . ++ .+++.+|.||+|+|
T Consensus 323 -~~~l~~~GV--~v~~~~~v~~i~~--~~~-----------------~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 323 -AAQAVADGV--QVISGSVVVDTEA--DEN-----------------GELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp -HHHHHHTTC--CEEETEEEEEEEE--CTT-----------------SCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred -HHHHHhCCe--EEEeCCEeEEEec--cCC-----------------CCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 223466777 7899999999976 201 1112455554 1 12 35799999999999
Q ss_pred cc
Q 041145 164 KF 165 (522)
Q Consensus 164 ~~ 165 (522)
..
T Consensus 381 ~~ 382 (965)
T 2gag_A 381 FN 382 (965)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 296
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.81 E-value=0.00032 Score=75.03 Aligned_cols=33 Identities=36% Similarity=0.564 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHh--CC--------CCcEEEccCC-CC
Q 041145 12 SKIGIIGAGISGIATAKQL--RH--------YDPLVFEATN-SI 44 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g--------~~v~v~e~~~-~~ 44 (522)
++|+|||||++||++|..| .| ++|+|||+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 5899999999999999999 66 8999999998 88
No 297
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.77 E-value=0.0014 Score=68.84 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=29.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~-----~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGL-----TVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHhCCC-----CEEEEeCCC
Confidence 579999999999999999998754 599999865
No 298
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.75 E-value=0.002 Score=65.86 Aligned_cols=48 Identities=13% Similarity=0.207 Sum_probs=36.9
Q ss_pred cchhhhcccCcEEEEeCc-eeEEe--cC---cEEecCCceeeccEEEEeccCCC
Q 041145 334 ENFFSEAEKGNILFKRAS-KWWFW--SG---GIEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 334 ~~~~~~l~~~~v~v~~~~-i~~~~--~~---~v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
+.+.+.+++.+|+++.+. +.++. ++ +|.+.+|+++.+|.||+|||...
T Consensus 138 ~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 138 DALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 345566677789998876 77664 33 37778888799999999999887
No 299
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.73 E-value=0.0039 Score=61.02 Aligned_cols=33 Identities=12% Similarity=-0.062 Sum_probs=28.5
Q ss_pred CeEEEECCCCCHHHHHHHHHH---hcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAE---ANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~---~~~~~~~~~Vt~v~R~~ 245 (522)
++|+|||+|.+|+-+|..|++ .+ .+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G-----~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP-----LYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC-----EEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC-----ceEEEEECCC
Confidence 379999999999999999998 54 4599999874
No 300
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.68 E-value=0.0026 Score=63.97 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
+..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~-----~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGI-----DCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CEEEEeCCCC
Confidence 44689999999999999999999865 4999999864
No 301
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.68 E-value=0.0012 Score=69.21 Aligned_cols=33 Identities=15% Similarity=0.016 Sum_probs=29.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|.+.+. +|+++.+.+
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~-----~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGM-----KVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCC-----CEEEEeCCC
Confidence 579999999999999999998654 599999875
No 302
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.67 E-value=0.0011 Score=69.21 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHh---CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL---RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~~ 43 (522)
.+|+||||||+||+.+|.+| .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 57999999999999999999 4789999999764
No 303
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.63 E-value=0.0012 Score=66.44 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=29.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~-----~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGK-----SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCC-----CEEEEeCCCC
Confidence 369999999999999999999865 4999998764
No 304
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.61 E-value=0.0015 Score=68.44 Aligned_cols=33 Identities=12% Similarity=-0.028 Sum_probs=28.7
Q ss_pred CeEEEECCCCCHHHHHHHHH-HhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECA-EANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~-~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|+ +.+. +|+++.+.+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~-----~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGL-----TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCC-----CEEEEECCC
Confidence 47999999999999999999 6654 599999875
No 305
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.61 E-value=0.0027 Score=66.87 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=35.6
Q ss_pred cchhhhccc-CcEEEEeCceeEEe--cC---cEEecCCceeeccEEEEeccCCC
Q 041145 334 ENFFSEAEK-GNILFKRASKWWFW--SG---GIEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 334 ~~~~~~l~~-~~v~v~~~~i~~~~--~~---~v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
..+.+.+++ .+|++..+.+..+. ++ +|.+.+|.++.+|.||+|||-.+
T Consensus 127 ~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 127 EYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 344455665 68998777777764 33 37788998899999999999754
No 306
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.60 E-value=0.0029 Score=63.22 Aligned_cols=34 Identities=26% Similarity=0.217 Sum_probs=30.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~-----v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGID-----NVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 3699999999999999999998754 999998764
No 307
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.57 E-value=0.0041 Score=62.73 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=29.3
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||||.+|+-+|..|++.+. +|+++.|.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~-----~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGF-----KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC-----CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-----CEEEEeCCC
Confidence 479999999999999999999765 499999875
No 308
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.56 E-value=0.00072 Score=69.21 Aligned_cols=36 Identities=19% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+++|+|||+|.+|+.+|..|++.+.+ |+++.+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~-----V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE-----VHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe-----EEEEeccCC
Confidence 568999999999999999999998754 999998764
No 309
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.53 E-value=0.0032 Score=66.51 Aligned_cols=47 Identities=19% Similarity=0.106 Sum_probs=34.6
Q ss_pred chhhhccc-CcEEEEeCceeEEe--cCc---EEecCCceeeccEEEEeccCCC
Q 041145 335 NFFSEAEK-GNILFKRASKWWFW--SGG---IEFEDKSKLEADVVLLATGYDG 381 (522)
Q Consensus 335 ~~~~~l~~-~~v~v~~~~i~~~~--~~~---v~~~dG~~~~~D~VI~ATG~~~ 381 (522)
.+.+.+++ .+|++..+.+..+. ++. |.+.+|+++.+|.||+|||-.+
T Consensus 122 ~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 122 YMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 44455655 58998877776654 332 7778898999999999999653
No 310
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.50 E-value=0.006 Score=61.11 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=30.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~-----~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGI-----DVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC-----EEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-----CEEEEeCCCC
Confidence 3689999999999999999998764 5999999864
No 311
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.50 E-value=0.0084 Score=59.50 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=34.1
Q ss_pred hhhhcccCcEEEEeCc-eeEEec--Cc---EEecCCceeeccEEEEeccCCCC
Q 041145 336 FFSEAEKGNILFKRAS-KWWFWS--GG---IEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 336 ~~~~l~~~~v~v~~~~-i~~~~~--~~---v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
+.+.+++.+++++.+. +.++.. ++ |.+.+| ++.+|.||+|||....
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHH
Confidence 4566667789998875 777753 22 566666 7999999999998753
No 312
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.48 E-value=0.0025 Score=67.30 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=38.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCCcccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIGGVWKH 50 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~GG~w~~ 50 (522)
.+||+|||+|..|...|..| .|.+|+++|+++.+||.|..
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 68999999999999999999 99999999999999999985
No 313
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.37 E-value=0.0078 Score=64.77 Aligned_cols=27 Identities=33% Similarity=0.354 Sum_probs=22.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEE
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLV 37 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v 37 (522)
.++|+|||||..|+-+|..| .|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999 6766653
No 314
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.31 E-value=0.0063 Score=66.10 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=29.1
Q ss_pred CCcEEEEC--CCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIG--AGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIG--aG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+||| +|..|+.+|..| .|.+|+++++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 45899999 999999999999 899999999975
No 315
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.29 E-value=0.0078 Score=59.18 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=35.8
Q ss_pred chhhhcccCcEEEEeCc-eeEEec--Cc---EEecCC--ceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWS--GG---IEFEDK--SKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~--~~---v~~~dG--~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. +.++.. ++ |.+.+| .++.+|.||+|||....
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 155 AYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 45566777789999776 777754 23 666777 36899999999998754
No 316
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.25 E-value=0.032 Score=58.74 Aligned_cols=34 Identities=9% Similarity=0.238 Sum_probs=30.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~-----~V~vlEk~~~ 160 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGA-----KVILIEKEPV 160 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-----cEEEEeCCCC
Confidence 479999999999999999999865 4999998764
No 317
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.25 E-value=0.0034 Score=57.13 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=31.2
Q ss_pred ccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 204 LLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 204 ~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
+.++|+|+|||+|.+|.-.+..|.+.+.. |+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~-----VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAA-----ITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCC-----EEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCE-----EEEECCC
Confidence 36889999999999999999999998765 9998653
No 318
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.24 E-value=0.014 Score=58.31 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=34.4
Q ss_pred chhhhcccCcEEEEeCc-eeEEec--C---cEEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWS--G---GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~--~---~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. +.++.. + +|.+.+| ++.+|.||+|||...+
T Consensus 179 ~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 179 AFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHH
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHH
Confidence 34556667789998866 777753 2 2666777 7899999999998653
No 319
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.17 E-value=0.0029 Score=64.62 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=29.6
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
-+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~-----~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGL-----KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSC-----CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----CEEEEECCCC
Confidence 369999999999999999998765 4999998864
No 320
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.16 E-value=0.0039 Score=62.19 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=29.5
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~-----~V~l~E~~~~ 38 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGL-----KTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-----CEEEEeCCCC
Confidence 69999999999999999999865 4999999863
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.14 E-value=0.0065 Score=64.18 Aligned_cols=48 Identities=19% Similarity=0.147 Sum_probs=35.7
Q ss_pred cchhhhcccCcEEEEeCc-eeEEecC-----cEEec-CC--ceeeccEEEEeccCCC
Q 041145 334 ENFFSEAEKGNILFKRAS-KWWFWSG-----GIEFE-DK--SKLEADVVLLATGYDG 381 (522)
Q Consensus 334 ~~~~~~l~~~~v~v~~~~-i~~~~~~-----~v~~~-dG--~~~~~D~VI~ATG~~~ 381 (522)
..+.+.+++.+++++.+. +.++..+ +|++. +| .++.+|.||.|+|...
T Consensus 132 ~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 132 KLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 344556666789999885 7777642 26676 77 4689999999999976
No 322
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.13 E-value=0.0044 Score=64.44 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=29.3
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~-----~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGH-----RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC-----CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----CEEEEccCC
Confidence 479999999999999999998764 599999886
No 323
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.08 E-value=0.0036 Score=65.69 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.+|++|||||++|+.+|.+| .|++|+|+|+...
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 56999999999999999999 8999999999864
No 324
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.00 E-value=0.013 Score=58.12 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=34.5
Q ss_pred chhhhcccCcEEEEeCc-eeEEecC--c--EEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWSG--G--IEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~~--~--v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. |.++..+ + |.+.+| ++.+|.||+|||....
T Consensus 169 ~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 169 AYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH
Confidence 45566666778998875 7777542 2 566666 7899999999998754
No 325
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.00 E-value=0.012 Score=61.87 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=29.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..|+|||+|.+|+=+|..|++.+.+ |+++.|.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~-----V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVG-----ALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCC-----EEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-----EEEEcCCCC
Confidence 4699999999999999999998654 999999864
No 326
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.97 E-value=0.021 Score=61.57 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=34.8
Q ss_pred chhhhcccCcEEEEeCc-eeEEec--Cc--EEecCCc-eeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWS--GG--IEFEDKS-KLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~--~~--v~~~dG~-~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. |.++.. ++ |.+.+|. ++.+|.||+|||....
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 34455666778998876 777753 33 5666777 7999999999999754
No 327
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.97 E-value=0.0035 Score=65.55 Aligned_cols=34 Identities=35% Similarity=0.439 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHh-CCCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL-RHYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~~~~ 44 (522)
.+|+||||||.||+.+|.+| .+.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 47999999999999999999 88999999998654
No 328
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.85 E-value=0.016 Score=57.92 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=30.1
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
-||+|||+|.+|.=+|..|++.+. +|+++.|.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~-----~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI-----KVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-----CEEEEecCCC
Confidence 379999999999999999999865 4999998764
No 329
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.84 E-value=0.0056 Score=63.46 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSIG 45 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~G 45 (522)
.+|++|||+|++|+.+|..| .|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 56999999999999999999 899999999987543
No 330
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.84 E-value=0.02 Score=59.88 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=29.6
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~-----~v~iiE~~~~ 50 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGR-----SVHVIETAGD 50 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCC-----CEEEEeCCCC
Confidence 479999999999999999999864 4999998753
No 331
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.83 E-value=0.0064 Score=64.26 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=30.7
Q ss_pred cCCcEEEECCCHHHHHHHHHh---CCCCcEEEccCCCC
Q 041145 10 YSSKIGIIGAGISGIATAKQL---RHYDPLVFEATNSI 44 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~~~ 44 (522)
..+|++|||+|++|+.+|.+| .+.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 357999999999999999999 48999999997543
No 332
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.82 E-value=0.051 Score=57.07 Aligned_cols=34 Identities=12% Similarity=0.266 Sum_probs=30.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
-.|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~-----V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGAN-----VILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 3799999999999999999998654 999998764
No 333
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.78 E-value=0.032 Score=62.98 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=28.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
..+|+|||||..|+-+|..+ .|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 35899999999999999998 776 899999864
No 334
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.77 E-value=0.0055 Score=64.42 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHh---CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL---RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~ 42 (522)
.+|+||||||.||+.+|.+| .+.+|+|+|+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 57999999999999999999 478999999987
No 335
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.76 E-value=0.0058 Score=64.26 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CC-CCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RH-YDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~~ 43 (522)
.+|+||||||.||+.+|.+| .+ .+|+|+|+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 57999999999999999999 44 79999999865
No 336
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.59 E-value=0.025 Score=60.90 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=35.5
Q ss_pred chhhhcccCcEEEEeCc-eeEEec--Cc--EEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWS--GG--IEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~--~~--v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. |.++.. ++ |.+.+|.++.+|.||+|||....
T Consensus 422 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 422 NVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 34555666779998876 777653 33 55668888999999999998754
No 337
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.49 E-value=0.088 Score=54.45 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=29.3
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+|||+|.+|+-.|..+++.+. +|+++.+.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~-----~V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGA-----DVLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-----cEEEEeCCCC
Confidence 59999999999999999999865 4999998764
No 338
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.43 E-value=0.017 Score=59.76 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=30.4
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+=+|..|++.+. +|+++.|.+.
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~-----~v~vlE~~~~ 45 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGV-----EVVVLERLVE 45 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-----CEEEEESCCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----CEEEEeCCCC
Confidence 579999999999999999999865 4999999865
No 339
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.42 E-value=0.0098 Score=61.65 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.+|++|||+|++|+.+|.+| .+.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57999999999999999999 8999999999754
No 340
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.40 E-value=0.014 Score=58.68 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=30.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCc-EEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQP-CTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~-Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+-+|..|++.+ .+ |+++.|.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-----CCeEEEEECCCC
Confidence 47999999999999999999874 57 999999864
No 341
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.38 E-value=0.096 Score=55.04 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=30.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..+|+|||+|.+|+..|..+++.+. +|+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~-----~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGA-----KVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSC-----CEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-----cEEEEecCCC
Confidence 4589999999999999999998765 4999998764
No 342
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.32 E-value=0.024 Score=58.63 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=30.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..+|+|||+|.+|+=+|..|++.+.+ |+++.|.+.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~-----v~vlE~~~~ 46 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVD-----VMVLEQLPQ 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCCC
Confidence 35799999999999999999998654 999999865
No 343
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=95.25 E-value=0.037 Score=57.66 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=30.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..|+|||+|.+|+=+|..|++.+. +|+++.|.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~-----~v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGV-----RVLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC-----CEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCC-----CEEEEeCCCC
Confidence 479999999999999999999865 4999999874
No 344
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.22 E-value=0.0079 Score=63.06 Aligned_cols=34 Identities=32% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHh---CCCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL---RHYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l---~g~~v~v~e~~~~~ 44 (522)
.+|++|||||.||+.+|.+| .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 46999999999999999999 47899999998654
No 345
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.21 E-value=0.14 Score=52.82 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=28.2
Q ss_pred CCcEEEECCCHHHHHHHHHh----CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL----RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l----~g~~v~v~e~~~~ 43 (522)
.++|+|||+|.+|..++..| .+.+|+++-|++.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 46899999999999999988 3678999988753
No 346
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.11 E-value=0.024 Score=59.04 Aligned_cols=48 Identities=6% Similarity=0.021 Sum_probs=35.5
Q ss_pred chhhhccc-CcEEEEeCceeEEec--C----cEEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEK-GNILFKRASKWWFWS--G----GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~-~~v~v~~~~i~~~~~--~----~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++ .+++++.+.+.++.. + +|.+++|+++.+|.||.|+|....
T Consensus 180 ~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34455555 678888888777753 2 366778888999999999999643
No 347
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.09 E-value=0.022 Score=48.43 Aligned_cols=32 Identities=25% Similarity=0.212 Sum_probs=29.3
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
...+|+|+|+|..|...|..| .|++|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 356899999999999999999 89999999996
No 348
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.97 E-value=0.018 Score=60.21 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--C-CCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R-HYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~-g~~v~v~e~~~~~ 44 (522)
.+|++|||+|++|+.+|.+| . +.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 47999999999999999999 4 8999999998654
No 349
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=94.84 E-value=0.038 Score=58.25 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=29.5
Q ss_pred CeEEEECCCCCHHHHHHHHHHh------cCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEA------NQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~------~~~~~~~~Vt~v~R~~~ 246 (522)
-.|+|||+|.+|+-+|..|++. +. +|+++.|.+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~-----~V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDL-----RVCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCC-----CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCC-----cEEEEeCCCC
Confidence 3699999999999999999998 54 4999998753
No 350
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.63 E-value=0.012 Score=64.96 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=29.6
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|++.+. .+|+++.+.+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~----~~V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGW----NNITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC----CcEEEEeCCC
Confidence 479999999999999999999864 1499999875
No 351
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.57 E-value=0.025 Score=58.29 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=29.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+|+|||+|.+|+-+|..|++. .+ |+++.+.+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~-----V~vie~~~~ 141 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LT-----VALIEERGW 141 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CC-----EEEECTTSS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CC-----EEEEeCCCC
Confidence 5799999999999999999987 54 999998764
No 352
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.51 E-value=0.043 Score=45.84 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=29.3
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+.+|+|||+|.-|..+|..| .|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 45899999999999999999 899999999973
No 353
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.33 E-value=0.032 Score=47.54 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=29.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|.-|..+|..| .|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45899999999999999999 899999999864
No 354
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.81 E-value=0.057 Score=44.98 Aligned_cols=30 Identities=17% Similarity=0.317 Sum_probs=28.1
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
++|+|+|+|.-|..+|..| .|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3899999999999999999 89999999986
No 355
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.66 E-value=0.037 Score=51.17 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.4
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+|||+|++|+-+|..|++.+.+ |+++.+.+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-----V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-----VHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCCC
Confidence 499999999999999999998765 999998753
No 356
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.58 E-value=0.052 Score=51.45 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=29.7
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
|+.++|+|||+|.-|...|..| .|++|+++|+++
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3345899999999999999999 899999999863
No 357
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.56 E-value=0.053 Score=51.75 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
..+|.|||.|.-|...|..| .|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999 8999999999754
No 358
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.41 E-value=0.054 Score=43.25 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=27.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CC-CCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RH-YDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~ 41 (522)
++|+|||+|..|..++..| .| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3899999999999999999 78 899999986
No 359
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.41 E-value=0.059 Score=44.56 Aligned_cols=29 Identities=31% Similarity=0.372 Sum_probs=27.3
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
+|+|||+|..|...|..| .|++|+++|++
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 799999999999999999 88999999985
No 360
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.14 E-value=0.072 Score=54.20 Aligned_cols=35 Identities=26% Similarity=0.117 Sum_probs=30.5
Q ss_pred cCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 205 LEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 205 ~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
+++|+|+|||+|.+|.-.+..|.+.+. +|+++...
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga-----~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA-----RLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB-----EEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC-----EEEEEcCC
Confidence 678999999999999999999999865 49998653
No 361
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.07 E-value=0.091 Score=43.56 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=27.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
++|+|+|+|..|..+|..| .|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999999999999999 79999999985
No 362
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.86 E-value=0.045 Score=56.39 Aligned_cols=50 Identities=6% Similarity=-0.058 Sum_probs=36.2
Q ss_pred CcchhhhcccCcEEEEeCc-eeEEec--C---cEEecCCceeeccEEEEeccCCCC
Q 041145 333 PENFFSEAEKGNILFKRAS-KWWFWS--G---GIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 333 ~~~~~~~l~~~~v~v~~~~-i~~~~~--~---~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+.+++.+++|+.+. |++|.. + +|+++||+++.+|.||.+++....
T Consensus 224 ~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 224 VQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred HHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 3445566777788898887 887753 2 388999999999999999887654
No 363
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.41 E-value=0.1 Score=50.10 Aligned_cols=31 Identities=16% Similarity=0.349 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|+|||||.-|-..|..+ .|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4899999999999988888 999999999864
No 364
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.27 E-value=0.11 Score=45.39 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--C-CCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--R-HYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~-g~~v~v~e~~~ 42 (522)
..+|+|||+|..|..+|..| . |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 34899999999999999999 7 99999999863
No 365
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.01 E-value=0.11 Score=44.08 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=32.2
Q ss_pred hccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 203 ELLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 203 ~~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
+...+++|+|+|+|..|.-+|..|...+. +|+++.|++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-----~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-----SVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-----eEEEEECCHH
Confidence 44678999999999999999999988764 4999988764
No 366
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.98 E-value=0.16 Score=46.01 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=29.0
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
+.++|+|||||..|...|..| .|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999 89999999874
No 367
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.78 E-value=0.15 Score=48.98 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=28.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|.-|...|..| .|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35899999999999999999 789999998863
No 368
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.65 E-value=0.12 Score=50.63 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=28.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
..+|+|||+|.-|...|..| .|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 34899999999999999999 78999999885
No 369
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.55 E-value=0.13 Score=50.82 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=29.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|..|+.+|+.+ .|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45899999999999999999 899999999875
No 370
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.44 E-value=0.13 Score=46.49 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|..+|+.| .|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 699999999999999999 899999999863
No 371
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.38 E-value=0.19 Score=48.02 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=31.4
Q ss_pred CcccccccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 1 MASAQNHVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 1 m~~~~~~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
|+.+...+ ..+|.|||.|.-|...|..| .|++|+++++++
T Consensus 1 m~m~~~~~--~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 1 MSLSDESF--EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp -CCCCCCC--SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCCcccC--CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 54444322 34899999999999999999 899999999863
No 372
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.20 E-value=0.14 Score=50.12 Aligned_cols=37 Identities=27% Similarity=0.383 Sum_probs=29.6
Q ss_pred cccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 6 NHVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 6 ~~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+.||+..+|.|||.|.-|...|..| .|++|+++++++
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3455567999999999999999999 899999999864
No 373
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.12 E-value=0.14 Score=51.92 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||.|.+|+++|+.| .|++|+++|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 56899999999999999988 899999999864
No 374
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.83 E-value=0.16 Score=51.36 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.++|+|||.|.+|+++|+.| .|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 45899999999999999888 8999999998754
No 375
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.79 E-value=0.19 Score=48.34 Aligned_cols=32 Identities=16% Similarity=0.349 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||+|.-|...|..| .|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34899999999999999999 899999999864
No 376
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.74 E-value=0.16 Score=49.87 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~ 41 (522)
..+|||+|||.+|+.+|+.| .|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 56999999999999999999 788 99999996
No 377
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.55 E-value=0.11 Score=48.54 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=31.9
Q ss_pred ccCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 204 LLEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 204 ~~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
+.++|+|+|||+|.+|.-.+..|.+.++. |+++....
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~-----VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCK-----LTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCE-----EEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCE-----EEEEcCCC
Confidence 36789999999999999999999998754 99997653
No 378
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.43 E-value=0.16 Score=49.92 Aligned_cols=32 Identities=9% Similarity=0.250 Sum_probs=29.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|..|+.+|+.+ .|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999 789999999874
No 379
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.33 E-value=0.23 Score=48.22 Aligned_cols=29 Identities=28% Similarity=0.265 Sum_probs=27.1
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
+|+|||+|.-|.+.|..| .|++|+++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 799999999999999999 88999999874
No 380
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.32 E-value=0.15 Score=51.92 Aligned_cols=30 Identities=33% Similarity=0.432 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|+|+|--|...|+.| .|++|+|+|+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 799999999999999999 799999999864
No 381
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.26 E-value=0.13 Score=51.94 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=30.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.++|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~-----~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDV-----DVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTC-----EEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC-----eEEEEcCCC
Confidence 3689999999999999999999865 599999876
No 382
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.26 E-value=0.2 Score=48.25 Aligned_cols=30 Identities=23% Similarity=0.151 Sum_probs=27.7
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.+|+|||+|.-|.+.|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3899999999999999999 78999999885
No 383
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.13 E-value=0.23 Score=48.14 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=27.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
.+|+|||||..|.++|..| .|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3899999999999999999 677 899999863
No 384
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.11 E-value=0.19 Score=49.22 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=28.8
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCC-CcEEEccC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHY-DPLVFEAT 41 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~ 41 (522)
+..+|+|+|||.+|+.+|+.| .|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356999999999999999999 787 79999996
No 385
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=90.09 E-value=0.18 Score=49.66 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCcee
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLHWT 248 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~~~ 248 (522)
++|+|||+|..|++.|..+++.+.+ |+++.+++...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~-----V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP-----VRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-----EEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc-----EEEEeccCCcC
Confidence 5799999999999999999998654 99999877433
No 386
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=90.04 E-value=0.17 Score=49.89 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=29.6
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.|+|||+|++|+=+|..|++.+.+ |+++.|++.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~-----V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK-----TLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 399999999999999999998765 999999764
No 387
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.92 E-value=0.23 Score=47.69 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=28.9
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCC-CcEEEccC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHY-DPLVFEAT 41 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~ 41 (522)
|+.++|+|||+|.-|.++|..| .|+ +++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4456899999999999999998 788 89999985
No 388
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.89 E-value=0.16 Score=47.55 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=29.2
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
+.++|+|||+|-.|...|..| .|.+|+|+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 356899999999999999999 89999999985
No 389
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.76 E-value=0.23 Score=47.70 Aligned_cols=30 Identities=27% Similarity=0.311 Sum_probs=27.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.+|+|||+|.-|.+.|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 3799999999999999999 88999999885
No 390
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.57 E-value=0.25 Score=47.40 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|.|||.|.-|...|..| .|++|+++|+++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3899999999999999999 899999999864
No 391
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.50 E-value=0.3 Score=41.19 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=29.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.++|+|+|+|..|..++..|.+.+.. |+++.|.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~-----V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN-----VTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC-----EEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC-----EEEEECCC
Confidence 47899999999999999999987654 99998864
No 392
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.46 E-value=0.39 Score=46.20 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=28.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|..|.=+|..|++.+. +|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-----~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-----CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-----EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-----eEEEEeCCh
Confidence 589999999999999999998765 499998864
No 393
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=89.39 E-value=0.19 Score=50.32 Aligned_cols=51 Identities=8% Similarity=-0.059 Sum_probs=39.1
Q ss_pred cCcchhhhcccCcEEEEeCc-eeEEec--CcEEecCCceeeccEEEEeccCCCC
Q 041145 332 LPENFFSEAEKGNILFKRAS-KWWFWS--GGIEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 332 ~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
+.+.+.+.+++.+++++.+. |.++.. ++++.++|+++++|.||+|+|....
T Consensus 191 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 191 VIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHH
Confidence 34456677777789999887 888864 3455678888999999999998754
No 394
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.39 E-value=0.32 Score=48.23 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=30.2
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
|..++|+|||+|..|..+++.+ .|++|+++|..+
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 3457999999999999999999 899999998764
No 395
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=89.36 E-value=0.2 Score=51.46 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=30.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
..++|+|||+|.+|+.+|..|++.+. +|+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~-----~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGH-----QVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTC-----EEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-----eEEEEECCC
Confidence 35789999999999999999999865 499998864
No 396
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.30 E-value=0.27 Score=48.21 Aligned_cols=32 Identities=13% Similarity=0.254 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
++|+|||||..|..+|+.+ .|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3899999999999999999 8999999998764
No 397
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.30 E-value=0.26 Score=47.00 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|.|||+|.-|...|..| .|++|+++++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3899999999999999999 899999999864
No 398
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.30 E-value=0.33 Score=47.51 Aligned_cols=31 Identities=29% Similarity=0.337 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|+|||+|.-|.+.|..| .|++|+++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4899999999999999999 789999999863
No 399
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.27 E-value=0.3 Score=47.11 Aligned_cols=31 Identities=26% Similarity=0.552 Sum_probs=27.0
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
.+|+|||||..|..+|..| .|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3799999999999999998 677 899998753
No 400
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.26 E-value=0.16 Score=51.69 Aligned_cols=32 Identities=31% Similarity=0.578 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHh--C-CC-CcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--R-HY-DPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~-g~-~v~v~e~~~~ 43 (522)
.+|+|||+|.-|+..|..| . |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4899999999999999999 7 99 9999999865
No 401
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.26 E-value=0.25 Score=50.03 Aligned_cols=30 Identities=17% Similarity=0.357 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|+..|..| .|++|+++|+++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 799999999999999999 899999999874
No 402
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.26 E-value=0.29 Score=46.70 Aligned_cols=31 Identities=19% Similarity=0.386 Sum_probs=28.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
++|+|||+|.-|...|..| .|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4799999999999999999 899999999863
No 403
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.22 E-value=0.18 Score=42.12 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.++|+|||+|..|...|..| .|.+|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 45899999999999999999 78888899885
No 404
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=89.16 E-value=0.21 Score=49.39 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=29.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHh--cCCCCCCcEEEEeecCc
Q 041145 208 KKVAIIGYRKSAIDLAVECAEA--NQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~--~~~~~~~~Vt~v~R~~~ 246 (522)
++|+|||+|.+|+-+|..|++. +. +|+++.|.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~-----~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW-----AIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-----EEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC-----CEEEEECCCC
Confidence 3699999999999999999998 64 5999998764
No 405
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.04 E-value=0.28 Score=49.21 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=28.9
Q ss_pred CcEEEECCCHHHHHHHHHh-CCCCcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL-RHYDPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~~~ 43 (522)
.+|+|||+|.-|+..|..| .|++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 3899999999999999999 9999999998743
No 406
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.97 E-value=0.37 Score=45.23 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=28.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
++|+|+|+|.-|-.++..| .|++|+++.|+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4899999999999999999 899999999864
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.92 E-value=0.25 Score=49.16 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|..|+.+|..+ .|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46899999999999999999 888999999864
No 408
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.88 E-value=0.3 Score=46.35 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=27.6
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|.+.|..| .|.+|++++|+.
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 799999999999999999 789999999863
No 409
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.68 E-value=0.21 Score=49.92 Aligned_cols=52 Identities=12% Similarity=0.054 Sum_probs=36.7
Q ss_pred cCcchhhhcccCcEEEEeCc-eeEEec--CcE--EecCCceeeccEEEEeccCCCCc
Q 041145 332 LPENFFSEAEKGNILFKRAS-KWWFWS--GGI--EFEDKSKLEADVVLLATGYDGKK 383 (522)
Q Consensus 332 ~~~~~~~~l~~~~v~v~~~~-i~~~~~--~~v--~~~dG~~~~~D~VI~ATG~~~~~ 383 (522)
+.+.+.+.+++.+++++.+. |+++.. +.+ +..+|+++.+|.||+|+|.....
T Consensus 198 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 198 IIDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHHH
Confidence 34455566777788998886 777753 332 23458889999999999987553
No 410
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.54 E-value=0.31 Score=46.84 Aligned_cols=29 Identities=28% Similarity=0.393 Sum_probs=26.7
Q ss_pred cEEEECCCHHHHHHHHHh--CCC--CcEEEccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHY--DPLVFEAT 41 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~ 41 (522)
+|+|||+|..|...|..| .|+ +|+++|++
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 799999999999999999 777 89999985
No 411
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.53 E-value=0.3 Score=46.58 Aligned_cols=29 Identities=31% Similarity=0.326 Sum_probs=27.2
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
+|+|||+|.-|...|..| .|++|++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 799999999999999999 79999999885
No 412
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.53 E-value=0.35 Score=46.57 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=28.2
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
|+..+|+|||||..|.++|..| .++ +++++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3345899999999999999988 677 899999863
No 413
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.38 E-value=0.25 Score=44.66 Aligned_cols=32 Identities=25% Similarity=0.355 Sum_probs=28.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEE-EccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLV-FEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v-~e~~~ 42 (522)
..+|+|||+|.-|.+.|..| .|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35899999999999999999 8999998 88753
No 414
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=88.37 E-value=0.3 Score=48.88 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=29.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEeecC
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEAN-QGPNGQPCTMVIRTL 245 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~-~~~~~~~Vt~v~R~~ 245 (522)
.++|+|||+|.+|+-.|..|++.+ . +|+++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~-----~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFH-----DYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCC-----CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC-----cEEEEECCC
Confidence 468999999999999999999986 4 499998864
No 415
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.26 E-value=0.34 Score=47.98 Aligned_cols=32 Identities=9% Similarity=0.256 Sum_probs=28.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
..+|+|||+|..|+.++..+ .|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999 888999999864
No 416
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.25 E-value=0.33 Score=40.17 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=30.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
..++|+|+|+|..|..+|..|.+.+.+ |+++.+.+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~-----V~~id~~~~ 40 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKK-----VLAVDKSKE 40 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe-----EEEEECCHH
Confidence 357899999999999999999988654 999988764
No 417
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.22 E-value=0.36 Score=45.46 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|...|..| .|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 699999999999999999 889999999864
No 418
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=88.18 E-value=0.31 Score=48.28 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=29.0
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~-----~V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGH-----RVLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-----eEEEEeCCC
Confidence 69999999999999999999865 499999875
No 419
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=88.01 E-value=0.34 Score=48.35 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=29.6
Q ss_pred cccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEc
Q 041145 6 NHVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFE 39 (522)
Q Consensus 6 ~~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e 39 (522)
.+||..++|+|||+|..|..+++.+ .|++|+++|
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3566677999999999999999999 899999999
No 420
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.95 E-value=0.41 Score=46.44 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=28.4
Q ss_pred CcccccccccCCcEEEECC-CHHHHHHHHHh--CCCCcEEEccCC
Q 041145 1 MASAQNHVQYSSKIGIIGA-GISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 1 m~~~~~~~m~~~~vvIIGa-G~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
|+.++.. |..++|+|+|| |.-|-.++..| .|++|+++.|+.
T Consensus 1 M~~s~~~-M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 1 MTVSPVP-SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -----------CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCCC-CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5555543 43568999999 99999999999 889999999863
No 421
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.93 E-value=0.3 Score=40.26 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=29.6
Q ss_pred cCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 205 LEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 205 ~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
+++++|+|+|+|..|..++..|.+.+.+ |+++.|.+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~-----v~~~d~~~ 39 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHE-----VLAVDINE 39 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCC-----CEEEESCH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCE-----EEEEeCCH
Confidence 4568899999999999999999987654 88888765
No 422
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=87.79 E-value=0.24 Score=48.48 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=28.8
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~-----~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGL-----NVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTC-----CEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-----eEEEEecCC
Confidence 69999999999999999999865 499999874
No 423
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=87.77 E-value=0.31 Score=47.97 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=28.8
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~-----~V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGV-----KTLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCCC-----eEEEEeCCC
Confidence 69999999999999999999865 499999874
No 424
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.76 E-value=0.38 Score=46.21 Aligned_cols=30 Identities=33% Similarity=0.574 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC--CcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY--DPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~ 41 (522)
.+|+|||+|..|.++|..| .++ +++++|.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4899999999999999999 566 79999875
No 425
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=87.73 E-value=0.31 Score=47.39 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=29.4
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCC-CCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQG-PNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~-~~~~~Vt~v~R~~ 245 (522)
+.|+|||+|.+|+=+|..|++.+.. ..+.+|+++.+.+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 3699999999999999999998600 0013599999874
No 426
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=87.67 E-value=0.23 Score=50.61 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=29.4
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
++|+|||+|.+|+=+|..|++.+.. .+|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~---~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCP---PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSC---CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCC---CcEEEEeCCC
Confidence 6899999999999999999997640 1599998863
No 427
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.66 E-value=0.44 Score=45.82 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=28.3
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
|+..+|+|||+|..|.++|..| .++ +++++|.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3345899999999999999988 666 899998863
No 428
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.63 E-value=0.32 Score=39.93 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=29.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
+.+|+|+|+|..|..+|..|.+.+. +|+++.|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-----~v~~~d~~~~ 38 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-----DIVLIDIDKD 38 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----eEEEEECCHH
Confidence 4689999999999999999998754 4999987653
No 429
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.55 E-value=0.46 Score=42.55 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=28.9
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.+|+|||+|.-|.+.|..| .|++|+++++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4899999999999999999 8899999998754
No 430
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=87.52 E-value=0.31 Score=47.99 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=30.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeec
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRT 244 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~ 244 (522)
+.++|+|||+|.+|+=+|..|.+.+. +|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~-----~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGH-----DVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSC-----EEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-----cEEEEecc
Confidence 46799999999999999999999864 59999887
No 431
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.43 E-value=0.47 Score=48.64 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=30.3
Q ss_pred ccccccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 5 QNHVQYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 5 ~~~~m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
-.|-| +.+|.|||+|.-|...|..| .|++|+++++++
T Consensus 5 ~~~~~-~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 5 HHHHM-SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp ----C-CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccccC-CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 33445 67999999999999999999 899999999864
No 432
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.41 E-value=0.28 Score=48.15 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=27.6
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|.+.|..| .|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 799999999999999999 788999999864
No 433
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.40 E-value=0.25 Score=39.23 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=30.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.+++|+|+|+|..|..++..|...+. .+|+++.|++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~----~~v~~~~r~~~ 40 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSN----YSVTVADHDLA 40 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSS----EEEEEEESCHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCC----ceEEEEeCCHH
Confidence 35799999999999999999998761 35888888753
No 434
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.39 E-value=0.41 Score=45.98 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=27.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
.+|+|||+|.-|.+.|..| .|+ +|+++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3799999999999999999 787 899999863
No 435
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.38 E-value=0.37 Score=49.16 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|+|||+|.-|+..|..| .|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3899999999999999999 799999999864
No 436
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.30 E-value=0.54 Score=45.61 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|+|||.|.-|-+.|+.| .|++|+++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4799999999999999999 899999999874
No 437
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=87.21 E-value=0.23 Score=50.38 Aligned_cols=38 Identities=21% Similarity=0.104 Sum_probs=29.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCC-CCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQG-PNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~-~~~~~Vt~v~R~~ 245 (522)
++|+|||+|.+|+=+|..|++.+.. ..+.+|+++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 5899999999999999999998710 0013599998864
No 438
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.10 E-value=0.45 Score=41.39 Aligned_cols=37 Identities=11% Similarity=-0.046 Sum_probs=31.9
Q ss_pred cCCCeEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEeecCc
Q 041145 205 LEGKKVAIIGYRKSAIDLAVECAEA-NQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 205 ~~~k~V~VIG~G~sg~dia~~l~~~-~~~~~~~~Vt~v~R~~~ 246 (522)
..+++|+|+|.|..|..+|..|.+. +.. |+++.|++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~-----V~vid~~~~ 74 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKI-----SLGIEIREE 74 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSC-----EEEEESCHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCe-----EEEEECCHH
Confidence 4567999999999999999999988 765 999988764
No 439
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.00 E-value=0.37 Score=49.28 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~ 42 (522)
+|+|||+|.-|+..|..| . |++|+++|++.
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 899999999999999999 4 78999999864
No 440
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.84 E-value=0.46 Score=45.74 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=27.5
Q ss_pred cccCCcEEEECCCHHHHHHHHHh--CC----CCcEEEccC
Q 041145 8 VQYSSKIGIIGAGISGIATAKQL--RH----YDPLVFEAT 41 (522)
Q Consensus 8 ~m~~~~vvIIGaG~aGl~~a~~l--~g----~~v~v~e~~ 41 (522)
+|+..+|.|||+|.-|.+.|..| .| ++|++++++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 34445899999999999999999 77 789999885
No 441
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.80 E-value=0.34 Score=46.11 Aligned_cols=33 Identities=36% Similarity=0.527 Sum_probs=26.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.++|.+||-|.-|...|..| .|++|+++|+++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999 8999999998754
No 442
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=86.77 E-value=0.52 Score=45.52 Aligned_cols=31 Identities=39% Similarity=0.559 Sum_probs=27.5
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
.+|+|||||..|.+.|..| .|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4899999999999999888 777 899999863
No 443
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.67 E-value=0.5 Score=47.42 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=28.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.+|+|||.|..||.+|..| .|++|+.||-+..
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 3899999999999999999 8999999997643
No 444
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=86.64 E-value=0.37 Score=48.24 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=28.5
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
+|+|||+|.+|+-.|..|++.+. +|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~-----~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGK-----KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCC-----eEEEEecCC
Confidence 69999999999999999999865 499998854
No 445
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=86.61 E-value=0.44 Score=48.90 Aligned_cols=46 Identities=7% Similarity=-0.007 Sum_probs=36.3
Q ss_pred cchhhhcccCcEEEEeCc-eeEEec--CcEEecCCceeeccEEEEeccC
Q 041145 334 ENFFSEAEKGNILFKRAS-KWWFWS--GGIEFEDKSKLEADVVLLATGY 379 (522)
Q Consensus 334 ~~~~~~l~~~~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~ATG~ 379 (522)
+.+.+.+.+.+++++.+. |.++.. +.+++.||+++.+|.||.++-.
T Consensus 226 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 226 IAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 345566778889998887 888765 3488999999999999988654
No 446
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.60 E-value=0.44 Score=44.63 Aligned_cols=30 Identities=10% Similarity=0.163 Sum_probs=27.8
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
++|+|+|||.-|-.++..| .|++|+++.|+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4899999999999999999 89999999886
No 447
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=86.58 E-value=0.38 Score=49.16 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=30.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
+.++|+|||+|.+|+=.|..|++.+. +|+++.+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~-----~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGY-----KVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC-----EEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-----CEEEEeccC
Confidence 45789999999999999999998764 599998764
No 448
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.53 E-value=0.41 Score=45.21 Aligned_cols=30 Identities=30% Similarity=0.495 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|.|||.|.-|...|..| .|++|+++++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 799999999999999999 899999999864
No 449
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.52 E-value=0.49 Score=45.63 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHH-HHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIA-TAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~-~a~~l--~g~~v~v~e~~~ 42 (522)
++|.|||.|-+|++ +|+.| .|++|++.|++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 38999999999997 66666 899999999863
No 450
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=86.50 E-value=0.96 Score=46.21 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=31.3
Q ss_pred ceEeceEEEEEEEcCCCCcccccCCccccCCCCCCCCCEEEEEEeCCeeEEEEECEEEEeeecc
Q 041145 102 YIKFNSKVVEIRHLGDRDTARVSDTAGEYGSLLKGHPVWEVAVETNQAIQWYGFELLVMCIGKF 165 (522)
Q Consensus 102 ~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~vViAtG~~ 165 (522)
.++++++|++|+. + .+.+.|++.+++ ++.||+||+|+|..
T Consensus 272 ~i~~~~~V~~i~~--~-------------------~~~v~v~~~~g~---~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 272 GYVFGCPVRSVVN--E-------------------RDAARVTARDGR---EFVAKRVVCTIPLN 311 (495)
T ss_dssp EEESSCCEEEEEE--C-------------------SSSEEEEETTCC---EEEEEEEEECCCGG
T ss_pred EEEeCCEEEEEEE--c-------------------CCEEEEEECCCC---EEEcCEEEECCCHH
Confidence 4899999999987 3 235677765553 68999999999965
No 451
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.46 E-value=0.53 Score=48.07 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=29.5
Q ss_pred ccCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 9 QYSSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 9 m~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
|.+++|.|||+|.-|.+.|..| .|++|+++++++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 5567999999999999999999 899999999863
No 452
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.42 E-value=0.46 Score=39.35 Aligned_cols=35 Identities=9% Similarity=0.137 Sum_probs=30.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecCc
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTLH 246 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~~ 246 (522)
.++|+|+|.|..|..+|..|.+.+.. |+++.+.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~-----v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIP-----LVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCHH
Confidence 36899999999999999999987654 999998764
No 453
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.41 E-value=0.53 Score=45.01 Aligned_cols=30 Identities=40% Similarity=0.625 Sum_probs=26.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~ 41 (522)
.+|+|||||..|...|..| .|+ +++++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 3799999999999999998 675 89999875
No 454
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.39 E-value=0.59 Score=44.00 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=28.0
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC---CcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY---DPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~---~v~v~e~~~ 42 (522)
.++|.|||+|.-|.+.|..| .|+ +|+++|+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 34899999999999999999 788 899998863
No 455
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=86.38 E-value=0.58 Score=47.77 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||+|.-|...|..| .|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34899999999999999999 899999999864
No 456
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.37 E-value=0.58 Score=44.07 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=27.7
Q ss_pred cEEEECC-CHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGA-GISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGa-G~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+ |.-|...|..| .|++|+++++++
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 8999999 99999999999 889999999864
No 457
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.35 E-value=0.39 Score=48.95 Aligned_cols=30 Identities=30% Similarity=0.347 Sum_probs=27.5
Q ss_pred cEEEECCCHHHHHHHHHh--C--CCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--R--HYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~--g~~v~v~e~~~ 42 (522)
+|+|||+|.-|+..|..| . |++|+++|++.
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 799999999999999999 5 79999999864
No 458
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.25 E-value=0.5 Score=45.72 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
..+|.|||+|.-|.+.|..| .|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 56899999999999999999 89999999885
No 459
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.24 E-value=0.48 Score=45.59 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=27.3
Q ss_pred CcccccccccCCcEEEECCCHHHHHHHHHh--CCC--CcEEEccC
Q 041145 1 MASAQNHVQYSSKIGIIGAGISGIATAKQL--RHY--DPLVFEAT 41 (522)
Q Consensus 1 m~~~~~~~m~~~~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~ 41 (522)
|++-.++. ..+|+|||+|..|.++|..| .++ +++++|.+
T Consensus 1 ~~~~~~~~--~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 1 MASITDKD--HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp ------CC--CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CcccccCC--CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 55555533 34899999999999999998 555 78999885
No 460
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=86.24 E-value=0.54 Score=43.22 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|.|||+|.-|.+.|..| .|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46899999999999999999 899999999864
No 461
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.23 E-value=0.49 Score=46.39 Aligned_cols=31 Identities=26% Similarity=0.438 Sum_probs=28.2
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
..+|+|||+|..|..++..+ .|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46899999999999999999 78899999986
No 462
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=86.20 E-value=0.4 Score=46.78 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=29.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
..|+|||+|.+|+=+|..|++.+. +|+++.+.+
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~-----~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGY-----SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-----EEEEEeccC
Confidence 479999999999999999998754 599999864
No 463
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.18 E-value=0.45 Score=45.27 Aligned_cols=30 Identities=33% Similarity=0.459 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|.|||+|.-|...|..| .|++|+++++++
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 799999999999999999 899999999863
No 464
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.17 E-value=0.6 Score=44.56 Aligned_cols=32 Identities=25% Similarity=0.180 Sum_probs=27.6
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|+.|.=+|..|+ .+. +|+++.|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~-----~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH-----DVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS-----EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC-----ceEEEECCH
Confidence 58999999999999999998 654 599998875
No 465
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.07 E-value=0.53 Score=44.97 Aligned_cols=30 Identities=40% Similarity=0.429 Sum_probs=27.5
Q ss_pred CcEEEECCCHHHHHHHHHh-CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL-RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~ 41 (522)
.+|+|||+|.-|.+.|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECC
Confidence 3899999999999999999 88999999885
No 466
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.05 E-value=0.6 Score=47.61 Aligned_cols=32 Identities=22% Similarity=0.514 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+.+|.|||+|.-|...|..| .|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 34899999999999999999 899999999863
No 467
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.04 E-value=0.67 Score=46.77 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=29.1
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||+|.-|...|..| .|++|+++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 35899999999999999999 899999999974
No 468
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=86.02 E-value=0.35 Score=47.33 Aligned_cols=47 Identities=11% Similarity=0.083 Sum_probs=33.7
Q ss_pred chhhhcccCcEEEEeCc-eeEEec--Cc--EEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRAS-KWWFWS--GG--IEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~~-i~~~~~--~~--v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+. |.++.. ++ |++.+| ++.+|.||+|||....
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHH
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHH
Confidence 35566666789998765 777653 32 555666 7999999999998643
No 469
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.94 E-value=0.54 Score=43.52 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=27.2
Q ss_pred CcEEEECCCHHHHHHHHHh--CC----CCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RH----YDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g----~~v~v~e~~~ 42 (522)
.+|.|||+|.-|.+.|..| .| ++|+++++++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 3799999999999999999 67 6899998864
No 470
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=85.83 E-value=0.47 Score=47.65 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=36.0
Q ss_pred chhhhcccCcEEEEeC----ceeEEec--Cc---EEecCCceeeccEEEEeccCCCC
Q 041145 335 NFFSEAEKGNILFKRA----SKWWFWS--GG---IEFEDKSKLEADVVLLATGYDGK 382 (522)
Q Consensus 335 ~~~~~l~~~~v~v~~~----~i~~~~~--~~---v~~~dG~~~~~D~VI~ATG~~~~ 382 (522)
.+.+.+++.+++++.+ .|.++.. ++ |++.+|+++.+|.||+|||....
T Consensus 166 ~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 166 AAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3455566678999887 4777643 22 77888988999999999998754
No 471
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.77 E-value=0.56 Score=47.68 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=28.7
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.++|+|||+|.-|...|..| .|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45899999999999999999 899999999863
No 472
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=85.74 E-value=0.43 Score=49.28 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=29.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
++|+|||+|.+|+-.|..|++.+. +|+++.+++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~-----~V~vlE~~~ 37 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGL-----NVVVLEARD 37 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCC-----CEEEEeCCC
Confidence 579999999999999999999865 499998864
No 473
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=85.70 E-value=0.39 Score=49.62 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=29.0
Q ss_pred CeEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEAN-QGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~-~~~~~~~Vt~v~R~~ 245 (522)
++|+|||+|.+|+=.|..|++.+ . +|+++.+++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~-----~V~VlEa~~ 42 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQ-----DCLVLEARD 42 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC-----SEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCC-----CEEEEeCCC
Confidence 68999999999999999999986 4 499998764
No 474
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.68 E-value=0.59 Score=47.12 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEATNSI 44 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~~ 44 (522)
+.+++|||.|.-|+..|..| .|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 35899999999999999999 89999999998653
No 475
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.64 E-value=0.54 Score=44.32 Aligned_cols=30 Identities=37% Similarity=0.554 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|.|||+|.-|...|..| .|++|+++++++
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 799999999999999999 899999999864
No 476
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.35 E-value=0.56 Score=45.06 Aligned_cols=31 Identities=32% Similarity=0.544 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
.+|.|||.|.-|...|..| .|++|+++++++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3899999999999999999 899999999863
No 477
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.26 E-value=0.5 Score=45.25 Aligned_cols=30 Identities=33% Similarity=0.438 Sum_probs=27.7
Q ss_pred CcEEEECCCHHHHHHHHHh--CCC-CcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHY-DPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~ 41 (522)
.+|.|||.|.-|...|..| .|+ +|++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4899999999999999999 788 99999985
No 478
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.26 E-value=0.75 Score=41.30 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=27.4
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.+|+|||+|..|...|..| .|++|++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3799999999999999999 88999999885
No 479
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.25 E-value=0.7 Score=46.13 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
+|+|||.|..|..+|+.| .|++|+++|+++.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 799999999999999999 8999999998753
No 480
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=85.20 E-value=0.53 Score=46.85 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=29.1
Q ss_pred CeEEEECCCCCHHHHHHHHHHh--cCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEA--NQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~--~~~~~~~~Vt~v~R~~ 245 (522)
..|+|||+|.+|+-+|..|++. +.+ |+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~-----V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS-----LLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC-----EEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe-----EEEEeCCC
Confidence 4799999999999999999998 654 99998864
No 481
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.19 E-value=0.78 Score=43.61 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=29.3
Q ss_pred CCcEEEECC-CHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 11 SSKIGIIGA-GISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 11 ~~~vvIIGa-G~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
.++|+|.|| |.-|..++..| .|++|++++|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 348999999 99999999999 8999999998753
No 482
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.07 E-value=0.7 Score=40.63 Aligned_cols=31 Identities=35% Similarity=0.534 Sum_probs=28.0
Q ss_pred CcEEEECC-CHHHHHHHHHh--CCCCcEEEccCC
Q 041145 12 SKIGIIGA-GISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGa-G~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
++|+|+|| |.-|..+++.| .|++|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 47999998 99999999999 899999999864
No 483
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.02 E-value=0.58 Score=44.91 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=28.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CC-CCcEEEccCC
Q 041145 12 SKIGIIGAGISGIATAKQL--RH-YDPLVFEATN 42 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g-~~v~v~e~~~ 42 (522)
.+|.|||+|.-|...|..| .| ++|+++++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4899999999999999999 78 9999999863
No 484
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.00 E-value=0.66 Score=45.72 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.++|+|||+|..|..+|+.+ .|.+|+++|++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 56899999999999999999 88899999986
No 485
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=84.99 E-value=0.52 Score=47.54 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=27.7
Q ss_pred cEEEECCCHHHHHHHHHh--CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL--RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|+..|..| .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 699999999999999999 799999999864
No 486
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=84.98 E-value=0.56 Score=44.45 Aligned_cols=30 Identities=33% Similarity=0.447 Sum_probs=27.3
Q ss_pred CcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 12 SKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 12 ~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.+|.|||+|.-|...|..| .|++|++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3799999999999999999 78999999885
No 487
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=84.93 E-value=0.47 Score=46.94 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=28.7
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~-----~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGH-----QVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-----EEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----cEEEEEecC
Confidence 479999999999999999998754 599999864
No 488
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=84.75 E-value=0.51 Score=45.40 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=30.3
Q ss_pred cCCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 205 LEGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 205 ~~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.....|+|||+|+.|+-.|..|++... +.+|+++.+.+
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~---G~~V~viEk~~ 100 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRP---DLKVCIIESSV 100 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCT---TSCEEEECSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCC---CCeEEEEECCC
Confidence 345679999999999999999986522 24599999875
No 489
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=84.73 E-value=0.47 Score=48.24 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=29.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 206 EGKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 206 ~~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
..++|+|||+|.+|+=+|..|++.+. +|+++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~-----~v~v~E~~~ 49 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGT-----DAVLLESSA 49 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTC-----CEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-----CEEEEEcCC
Confidence 45789999999999999999998765 499998874
No 490
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.64 E-value=0.66 Score=44.25 Aligned_cols=29 Identities=28% Similarity=0.568 Sum_probs=26.5
Q ss_pred cEEEECCCHHHHHHHHHh--CCC--CcEEEccC
Q 041145 13 KIGIIGAGISGIATAKQL--RHY--DPLVFEAT 41 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l--~g~--~v~v~e~~ 41 (522)
+|+|||||..|.+.|..| .|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 799999999999999998 777 89999985
No 491
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=84.60 E-value=0.59 Score=46.37 Aligned_cols=34 Identities=26% Similarity=0.177 Sum_probs=29.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 207 GKKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 207 ~k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~-----~v~v~E~~~ 62 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQ-----RVLIVDRRP 62 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-----ceEEEeccC
Confidence 3589999999999999999998754 499998864
No 492
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=84.43 E-value=0.58 Score=47.18 Aligned_cols=31 Identities=10% Similarity=-0.044 Sum_probs=28.3
Q ss_pred CeEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEee
Q 041145 208 KKVAIIGYRKSAIDLAVECAEAN-QGPNGQPCTMVIR 243 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~-~~~~~~~Vt~v~R 243 (522)
.+|+|||+|.+|+-+|..|++.+ .+ |+++.+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~-----V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGS-----VLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSC-----EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc-----EEEEcc
Confidence 47999999999999999999987 54 999998
No 493
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.34 E-value=0.63 Score=42.94 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=28.5
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCC-CcEEEccCC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHY-DPLVFEATN 42 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~-~v~v~e~~~ 42 (522)
..+|+|||+|-.|..+|+.| .|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 46899999999999999999 787 899999863
No 494
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=84.24 E-value=0.56 Score=48.24 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=28.7
Q ss_pred eEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 209 KVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 209 ~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.|+|||+|.+|+-+|.+|++.+. +|+++.+.+
T Consensus 5 DVvIIGgGi~G~~~A~~La~~G~-----~V~llE~~~ 36 (501)
T 2qcu_A 5 DLIVIGGGINGAGIAADAAGRGL-----SVLMLEAQD 36 (501)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEECCC
Confidence 69999999999999999999865 499999864
No 495
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.15 E-value=0.68 Score=46.97 Aligned_cols=31 Identities=23% Similarity=0.105 Sum_probs=28.8
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.++|+|||+|..|...++.| .|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 56899999999999999999 89999999985
No 496
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=84.12 E-value=0.71 Score=45.86 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=28.8
Q ss_pred CeEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEA-NQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~-~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+=+|..|++. +.+ |+++.+++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~-----v~v~E~~~ 41 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKR-----VLVLERRP 41 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCC-----EEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 5799999999999999999998 654 99998763
No 497
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.11 E-value=0.7 Score=45.41 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=28.4
Q ss_pred CCcEEEECCCHHHHHHHHHh--CCCCcEEEccC
Q 041145 11 SSKIGIIGAGISGIATAKQL--RHYDPLVFEAT 41 (522)
Q Consensus 11 ~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~ 41 (522)
.++|+|||+|..|..+|+.+ .|.+|+++|++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46899999999999999999 89999999986
No 498
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.11 E-value=0.61 Score=47.21 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=29.2
Q ss_pred CeEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEeecC
Q 041145 208 KKVAIIGYRKSAIDLAVECAEANQGPNGQPCTMVIRTL 245 (522)
Q Consensus 208 k~V~VIG~G~sg~dia~~l~~~~~~~~~~~Vt~v~R~~ 245 (522)
.+|+|||+|.+|+=+|..|++.+. +|+++.+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~-----~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGK-----KVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-----CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----eEEEEeCCC
Confidence 579999999999999999999865 499999874
No 499
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.09 E-value=0.68 Score=46.07 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=27.7
Q ss_pred cEEEECCCHHHHHHHHHh-CCCCcEEEccCC
Q 041145 13 KIGIIGAGISGIATAKQL-RHYDPLVFEATN 42 (522)
Q Consensus 13 ~vvIIGaG~aGl~~a~~l-~g~~v~v~e~~~ 42 (522)
+|+|||+|.-|+..|..| .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 699999999999999999 889999999864
No 500
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=84.08 E-value=0.85 Score=45.67 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=29.6
Q ss_pred cCCcEEEECCCHHHHHHHHHh--CCCCcEEEccCCC
Q 041145 10 YSSKIGIIGAGISGIATAKQL--RHYDPLVFEATNS 43 (522)
Q Consensus 10 ~~~~vvIIGaG~aGl~~a~~l--~g~~v~v~e~~~~ 43 (522)
..++|+|||+|..|...+..+ .|++|+++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 356899999999999999999 8999999987643
Done!