Query 041151
Match_columns 463
No_of_seqs 187 out of 2633
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 04:15:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041151.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041151hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00377 alanine aminotransfer 100.0 5.8E-62 1.3E-66 502.2 47.7 447 4-455 3-481 (481)
2 PLN02231 alanine transaminase 100.0 1.4E-61 3.1E-66 499.9 48.2 449 6-456 57-534 (534)
3 COG0436 Aspartate/tyrosine/aro 100.0 2.3E-58 5E-63 459.8 39.9 362 17-450 5-392 (393)
4 KOG0258 Alanine aminotransfera 100.0 5.6E-57 1.2E-61 420.2 38.8 445 2-455 4-475 (475)
5 PLN02368 alanine transaminase 100.0 8.5E-55 1.8E-59 436.9 40.3 383 1-384 1-402 (407)
6 PRK13355 bifunctional HTH-doma 100.0 2.8E-52 6.2E-57 433.5 40.8 376 10-451 118-516 (517)
7 KOG0257 Kynurenine aminotransf 100.0 3.6E-54 7.9E-59 408.3 23.7 377 7-444 4-414 (420)
8 KOG0259 Tyrosine aminotransfer 100.0 1.5E-50 3.2E-55 376.8 36.0 372 17-452 38-436 (447)
9 PRK07366 succinyldiaminopimela 100.0 1E-50 2.2E-55 408.8 37.6 364 11-447 3-388 (388)
10 PRK06855 aminotransferase; Val 100.0 1.9E-50 4E-55 411.3 39.8 372 22-450 16-430 (433)
11 PLN00175 aminotransferase fami 100.0 1.1E-50 2.5E-55 410.4 37.6 360 10-448 31-412 (413)
12 PRK07681 aspartate aminotransf 100.0 3.6E-50 7.8E-55 406.1 39.4 359 11-445 5-384 (399)
13 PRK09147 succinyldiaminopimela 100.0 4.4E-50 9.5E-55 405.2 39.6 363 12-448 2-395 (396)
14 PRK08636 aspartate aminotransf 100.0 6.4E-50 1.4E-54 404.6 40.7 373 12-450 7-401 (403)
15 PLN00145 tyrosine/nicotianamin 100.0 7.8E-50 1.7E-54 405.8 39.3 366 23-453 35-428 (430)
16 PLN02187 rooty/superroot1 100.0 8.3E-50 1.8E-54 408.3 39.2 368 21-454 47-443 (462)
17 PRK06107 aspartate aminotransf 100.0 1.7E-49 3.8E-54 401.3 39.4 371 9-450 4-401 (402)
18 PRK08960 hypothetical protein; 100.0 3.6E-49 7.7E-54 397.4 40.0 362 10-448 4-386 (387)
19 PRK08068 transaminase; Reviewe 100.0 3E-49 6.5E-54 398.2 39.1 361 11-446 5-386 (389)
20 PRK09148 aminotransferase; Val 100.0 4.9E-49 1.1E-53 398.1 40.5 374 12-454 4-395 (405)
21 TIGR03540 DapC_direct LL-diami 100.0 2.2E-49 4.9E-54 398.5 37.7 360 11-445 2-382 (383)
22 PRK05942 aspartate aminotransf 100.0 3.2E-49 6.9E-54 398.5 38.5 361 10-445 7-388 (394)
23 PRK09276 LL-diaminopimelate am 100.0 3.2E-49 6.9E-54 397.7 38.2 359 11-445 4-384 (385)
24 PRK06348 aspartate aminotransf 100.0 4E-49 8.6E-54 396.5 38.3 358 10-446 5-382 (384)
25 PRK06207 aspartate aminotransf 100.0 1.1E-48 2.3E-53 395.4 39.5 343 37-451 38-404 (405)
26 TIGR03538 DapC_gpp succinyldia 100.0 1.5E-48 3.4E-53 393.5 39.2 360 13-446 2-392 (393)
27 PLN02656 tyrosine transaminase 100.0 1.3E-48 2.9E-53 395.4 38.3 354 34-451 27-405 (409)
28 PRK09265 aminotransferase AlaT 100.0 2.8E-48 6E-53 392.9 40.2 375 10-450 5-402 (404)
29 PLN00143 tyrosine/nicotianamin 100.0 2.1E-48 4.5E-53 393.8 38.8 352 36-452 30-407 (409)
30 PRK07337 aminotransferase; Val 100.0 4.1E-48 8.8E-53 389.9 38.8 364 11-447 3-387 (388)
31 PRK08912 hypothetical protein; 100.0 4.1E-48 8.9E-53 389.8 37.6 363 10-449 3-386 (387)
32 PRK08363 alanine aminotransfer 100.0 8E-48 1.7E-52 389.0 38.8 369 11-450 4-395 (398)
33 PRK07682 hypothetical protein; 100.0 4E-48 8.7E-53 388.7 35.7 337 38-450 20-377 (378)
34 COG1167 ARO8 Transcriptional r 100.0 1.3E-47 2.8E-52 390.8 39.0 330 80-451 103-457 (459)
35 TIGR01264 tyr_amTase_E tyrosin 100.0 1.8E-47 4E-52 386.7 38.2 363 20-450 13-400 (401)
36 PTZ00433 tyrosine aminotransfe 100.0 1.3E-47 2.8E-52 388.7 36.8 352 36-451 31-410 (412)
37 PRK08361 aspartate aminotransf 100.0 2.3E-47 5E-52 384.7 37.6 362 10-449 9-390 (391)
38 COG1168 MalY Bifunctional PLP- 100.0 1.9E-47 4.2E-52 359.1 34.1 339 38-449 25-386 (388)
39 PRK06108 aspartate aminotransf 100.0 2.4E-47 5.2E-52 383.8 37.4 358 13-448 3-381 (382)
40 PRK12414 putative aminotransfe 100.0 2.3E-47 4.9E-52 383.6 36.7 335 36-445 27-383 (384)
41 PRK05764 aspartate aminotransf 100.0 3.1E-47 6.8E-52 384.3 37.8 370 10-450 3-392 (393)
42 PRK05957 aspartate aminotransf 100.0 5.4E-47 1.2E-51 381.5 39.4 365 10-452 3-388 (389)
43 PRK07309 aromatic amino acid a 100.0 7.4E-47 1.6E-51 380.8 39.9 364 10-450 6-389 (391)
44 PRK07683 aminotransferase A; V 100.0 7.1E-47 1.5E-51 380.4 39.0 360 11-450 5-384 (387)
45 PRK09082 methionine aminotrans 100.0 3.2E-47 6.9E-52 382.9 34.6 357 11-445 8-385 (386)
46 PLN02450 1-aminocyclopropane-1 100.0 9.1E-47 2E-51 386.5 37.9 331 99-451 78-432 (468)
47 PRK07550 hypothetical protein; 100.0 1.6E-46 3.5E-51 378.0 38.9 362 11-446 2-384 (386)
48 PRK08175 aminotransferase; Val 100.0 2E-46 4.4E-51 378.2 39.2 366 15-449 6-389 (395)
49 TIGR01265 tyr_nico_aTase tyros 100.0 2.1E-46 4.6E-51 378.9 39.1 366 20-450 13-402 (403)
50 PRK07324 transaminase; Validat 100.0 2.3E-47 4.9E-52 381.8 31.4 339 24-449 12-370 (373)
51 PRK07568 aspartate aminotransf 100.0 2.9E-46 6.2E-51 377.8 39.3 366 11-452 3-395 (397)
52 PRK05839 hypothetical protein; 100.0 2.7E-46 5.9E-51 374.3 37.6 348 18-448 3-373 (374)
53 PRK06290 aspartate aminotransf 100.0 3.3E-46 7.1E-51 377.0 38.2 356 20-450 24-406 (410)
54 PLN02607 1-aminocyclopropane-1 100.0 4.6E-46 1E-50 378.5 39.1 332 99-453 87-441 (447)
55 PRK07777 aminotransferase; Val 100.0 4E-46 8.7E-51 375.3 38.3 357 13-447 4-384 (387)
56 PRK07590 L,L-diaminopimelate a 100.0 2.7E-46 5.9E-51 378.8 36.8 357 11-446 4-408 (409)
57 PLN02376 1-aminocyclopropane-1 100.0 7E-46 1.5E-50 381.2 38.6 333 99-452 86-441 (496)
58 TIGR03537 DapC succinyldiamino 100.0 5E-45 1.1E-49 362.3 35.7 324 40-445 2-349 (350)
59 PRK09275 aspartate aminotransf 100.0 1.1E-45 2.3E-50 376.8 30.7 332 82-458 115-526 (527)
60 TIGR03539 DapC_actino succinyl 100.0 7.2E-45 1.6E-49 362.0 35.9 339 18-443 1-356 (357)
61 PRK15481 transcriptional regul 100.0 3.5E-45 7.7E-50 373.2 34.2 310 83-448 101-430 (431)
62 PRK07865 N-succinyldiaminopime 100.0 1.3E-44 2.9E-49 361.3 35.5 345 10-444 2-363 (364)
63 PTZ00376 aspartate aminotransf 100.0 3.3E-44 7.2E-49 362.9 33.6 362 11-448 4-402 (404)
64 PRK09257 aromatic amino acid a 100.0 6.9E-44 1.5E-48 359.9 33.1 362 13-447 3-396 (396)
65 PRK06836 aspartate aminotransf 100.0 5.8E-43 1.3E-47 352.8 38.3 355 11-450 2-392 (394)
66 TIGR03542 DAPAT_plant LL-diami 100.0 3.9E-43 8.5E-48 355.0 35.6 351 14-446 6-401 (402)
67 PRK09440 avtA valine--pyruvate 100.0 4.5E-43 9.8E-48 356.4 35.8 342 38-452 30-414 (416)
68 TIGR03801 asp_4_decarbox aspar 100.0 1.6E-43 3.4E-48 360.5 30.2 328 83-454 109-521 (521)
69 PRK01533 histidinol-phosphate 100.0 7.7E-43 1.7E-47 347.7 30.0 320 36-456 27-362 (366)
70 PLN02672 methionine S-methyltr 100.0 4.1E-42 8.8E-47 370.0 36.1 388 6-448 664-1079(1082)
71 PLN02397 aspartate transaminas 100.0 1.2E-41 2.6E-46 345.3 35.6 359 10-448 22-420 (423)
72 PRK14809 histidinol-phosphate 100.0 5.4E-42 1.2E-46 341.6 31.8 323 23-448 15-356 (357)
73 PRK02610 histidinol-phosphate 100.0 8.8E-42 1.9E-46 341.9 33.4 323 39-450 29-372 (374)
74 PF00155 Aminotran_1_2: Aminot 100.0 1.9E-42 4.1E-47 345.8 28.4 339 39-443 2-363 (363)
75 PRK06358 threonine-phosphate d 100.0 1.4E-41 3.1E-46 337.7 33.2 318 36-447 17-353 (354)
76 KOG0256 1-aminocyclopropane-1- 100.0 3.2E-41 7E-46 317.2 33.5 327 99-450 113-462 (471)
77 PRK06225 aspartate aminotransf 100.0 8.5E-41 1.8E-45 335.8 35.9 352 16-452 7-379 (380)
78 PRK08637 hypothetical protein; 100.0 5.5E-41 1.2E-45 337.7 34.3 327 84-450 20-387 (388)
79 PRK03158 histidinol-phosphate 100.0 3.2E-41 7E-46 336.4 30.2 314 38-446 29-358 (359)
80 PRK03317 histidinol-phosphate 100.0 6.3E-41 1.4E-45 335.2 31.9 321 39-449 27-364 (368)
81 PRK08056 threonine-phosphate d 100.0 1.4E-40 3E-45 331.2 31.6 327 27-447 9-353 (356)
82 PRK05166 histidinol-phosphate 100.0 2.4E-40 5.3E-45 331.2 33.6 319 36-447 34-369 (371)
83 PRK08153 histidinol-phosphate 100.0 2.2E-40 4.7E-45 331.1 32.6 323 34-451 27-367 (369)
84 PLN03026 histidinol-phosphate 100.0 2E-40 4.4E-45 332.3 31.9 337 11-445 24-378 (380)
85 PRK04870 histidinol-phosphate 100.0 2.8E-40 6E-45 329.2 30.1 313 37-446 25-355 (356)
86 PRK02731 histidinol-phosphate 100.0 8.3E-40 1.8E-44 327.2 33.6 343 11-448 6-365 (367)
87 PRK07392 threonine-phosphate d 100.0 1.1E-39 2.4E-44 325.2 33.9 315 36-446 20-356 (360)
88 PRK07908 hypothetical protein; 100.0 8E-39 1.7E-43 317.8 33.8 310 37-448 21-346 (349)
89 PRK05387 histidinol-phosphate 100.0 2.6E-39 5.5E-44 322.0 30.3 311 37-448 23-352 (353)
90 PRK14807 histidinol-phosphate 100.0 1.2E-38 2.7E-43 316.5 32.7 311 39-447 23-350 (351)
91 COG0079 HisC Histidinol-phosph 100.0 1.6E-38 3.5E-43 311.8 32.2 301 82-449 37-354 (356)
92 PRK04781 histidinol-phosphate 100.0 6E-39 1.3E-43 320.0 29.6 288 100-447 53-361 (364)
93 PRK09105 putative aminotransfe 100.0 1.5E-38 3.2E-43 317.5 32.1 309 38-447 43-368 (370)
94 KOG0634 Aromatic amino acid am 100.0 2.6E-38 5.6E-43 300.1 31.3 338 99-453 92-470 (472)
95 PRK06425 histidinol-phosphate 100.0 1E-38 2.2E-43 314.6 29.5 283 100-447 34-331 (332)
96 TIGR01141 hisC histidinol-phos 100.0 6E-38 1.3E-42 311.3 28.6 311 38-444 19-346 (346)
97 PRK00950 histidinol-phosphate 100.0 1.1E-37 2.4E-42 311.1 30.7 336 11-447 6-360 (361)
98 PRK01688 histidinol-phosphate 100.0 3.1E-38 6.7E-43 313.4 26.4 283 99-443 50-350 (351)
99 COG3977 Alanine-alpha-ketoisov 100.0 1.2E-36 2.6E-41 275.2 30.1 360 20-453 13-415 (417)
100 PRK03321 putative aminotransfe 100.0 3.5E-37 7.6E-42 306.5 28.9 311 39-448 23-350 (352)
101 PRK14808 histidinol-phosphate 100.0 7.7E-37 1.7E-41 301.2 29.0 301 36-446 17-334 (335)
102 PRK04635 histidinol-phosphate 100.0 6.6E-37 1.4E-41 304.5 27.8 280 100-445 54-351 (354)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.8E-36 3.8E-41 298.4 28.2 311 26-443 5-329 (330)
104 PRK03967 histidinol-phosphate 100.0 3E-36 6.5E-41 297.5 29.5 298 37-446 17-331 (337)
105 PRK05664 threonine-phosphate d 100.0 1.1E-35 2.3E-40 292.8 30.3 267 102-448 46-327 (330)
106 PRK06959 putative threonine-ph 100.0 1.2E-35 2.6E-40 293.1 29.5 274 101-452 49-336 (339)
107 PRK08354 putative aminotransfe 100.0 1.5E-34 3.2E-39 282.3 31.9 275 82-446 22-309 (311)
108 PRK13238 tnaA tryptophanase/L- 100.0 5E-33 1.1E-37 282.9 31.5 360 14-447 12-431 (460)
109 cd00609 AAT_like Aspartate ami 100.0 1E-30 2.2E-35 259.2 34.1 317 82-444 13-349 (350)
110 TIGR03576 pyridox_MJ0158 pyrid 100.0 3.1E-29 6.6E-34 247.1 30.2 291 82-447 35-345 (346)
111 PLN02822 serine palmitoyltrans 100.0 5.5E-29 1.2E-33 255.5 30.9 323 82-451 125-479 (481)
112 PRK06939 2-amino-3-ketobutyrat 100.0 2.9E-28 6.2E-33 246.4 34.4 335 36-450 40-394 (397)
113 PF12897 Aminotran_MocR: Alani 100.0 2.4E-28 5.2E-33 230.8 29.8 358 25-449 12-415 (425)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 3.2E-28 6.9E-33 242.7 31.5 326 35-444 13-360 (360)
115 TIGR01822 2am3keto_CoA 2-amino 100.0 4.8E-28 1E-32 244.5 32.5 330 36-450 36-390 (393)
116 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.8E-27 6.1E-32 238.3 34.0 332 35-449 30-381 (385)
117 cd00617 Tnase_like Tryptophana 100.0 2.8E-26 6.1E-31 230.4 33.0 346 30-449 3-408 (431)
118 PRK10874 cysteine sulfinate de 100.0 1E-26 2.2E-31 235.3 29.3 308 82-450 32-399 (401)
119 PRK05958 8-amino-7-oxononanoat 100.0 3.5E-26 7.6E-31 230.2 33.0 331 36-447 37-385 (385)
120 COG1448 TyrB Aspartate/tyrosin 100.0 6E-26 1.3E-30 214.3 31.0 356 13-446 3-395 (396)
121 PRK13392 5-aminolevulinate syn 100.0 1.2E-26 2.5E-31 235.5 28.0 312 82-450 62-398 (410)
122 TIGR03392 FeS_syn_CsdA cystein 100.0 3.6E-26 7.8E-31 231.2 30.0 305 82-450 29-396 (398)
123 PRK10534 L-threonine aldolase; 100.0 3.9E-26 8.4E-31 225.4 27.4 294 82-448 13-332 (333)
124 PRK02627 acetylornithine amino 100.0 3E-26 6.5E-31 231.6 25.8 299 82-450 57-395 (396)
125 PLN02483 serine palmitoyltrans 100.0 8E-26 1.7E-30 232.6 29.3 309 99-459 138-476 (489)
126 PLN02721 threonine aldolase 99.9 2.5E-25 5.4E-30 221.4 30.0 305 82-448 19-351 (353)
127 TIGR01979 sufS cysteine desulf 99.9 3.9E-25 8.5E-30 224.0 30.6 304 82-450 31-402 (403)
128 cd06454 KBL_like KBL_like; thi 99.9 8.1E-25 1.8E-29 217.3 31.9 310 82-446 17-348 (349)
129 KOG0633 Histidinol phosphate a 99.9 2.7E-25 5.9E-30 198.0 23.6 273 126-446 82-374 (375)
130 PRK09295 bifunctional cysteine 99.9 4.7E-25 1E-29 223.5 27.9 303 82-448 36-403 (406)
131 TIGR00707 argD acetylornithine 99.9 3.1E-25 6.7E-30 222.9 25.8 296 82-446 45-378 (379)
132 TIGR01821 5aminolev_synth 5-am 99.9 3E-24 6.4E-29 217.4 33.0 312 82-450 61-397 (402)
133 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.2E-24 2.7E-29 217.5 28.8 283 109-449 53-368 (370)
134 cd06502 TA_like Low-specificit 99.9 1.4E-24 3E-29 214.8 27.7 301 81-445 10-337 (338)
135 cd00378 SHMT Serine-glycine hy 99.9 4.7E-24 1E-28 216.1 31.9 312 82-451 32-387 (402)
136 PRK07179 hypothetical protein; 99.9 9.2E-24 2E-28 214.1 33.3 308 82-450 70-399 (407)
137 PRK01278 argD acetylornithine 99.9 1.7E-24 3.8E-29 218.1 27.5 303 82-449 49-388 (389)
138 PRK09064 5-aminolevulinate syn 99.9 1.6E-23 3.4E-28 212.5 34.4 315 82-450 62-398 (407)
139 PLN02855 Bifunctional selenocy 99.9 2E-24 4.4E-29 220.0 28.0 306 82-451 45-420 (424)
140 PRK03244 argD acetylornithine 99.9 8.6E-25 1.9E-29 221.1 24.5 304 82-451 61-396 (398)
141 PRK02948 cysteine desulfurase; 99.9 1.6E-24 3.4E-29 218.0 25.7 309 82-451 13-376 (381)
142 PRK07049 methionine gamma-lyas 99.9 5.6E-24 1.2E-28 215.3 29.2 218 100-363 77-315 (427)
143 PRK13393 5-aminolevulinate syn 99.9 7.3E-23 1.6E-27 207.4 34.8 313 82-450 61-397 (406)
144 cd06451 AGAT_like Alanine-glyo 99.9 1.1E-23 2.3E-28 210.0 27.8 297 82-447 11-355 (356)
145 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.1E-23 2.4E-28 213.0 26.9 307 82-443 30-397 (397)
146 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.9E-23 6.2E-28 206.7 28.1 299 81-446 10-354 (355)
147 PRK05093 argD bifunctional N-s 99.9 2.1E-23 4.5E-28 211.1 27.5 304 82-450 58-401 (403)
148 TIGR03403 nifS_epsilon cystein 99.9 3.3E-23 7.1E-28 208.4 28.2 314 82-452 12-378 (382)
149 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.1E-23 1.3E-27 204.8 28.2 309 82-447 14-360 (361)
150 PRK04073 rocD ornithine--oxo-a 99.9 3.5E-23 7.7E-28 208.9 26.2 298 82-447 58-395 (396)
151 cd06453 SufS_like Cysteine des 99.9 4E-23 8.6E-28 207.2 25.6 298 82-443 12-373 (373)
152 COG0156 BioF 7-keto-8-aminopel 99.9 2.2E-22 4.8E-27 197.3 29.4 312 82-446 55-387 (388)
153 COG0520 csdA Selenocysteine ly 99.9 1.2E-22 2.5E-27 203.0 27.7 304 82-448 35-404 (405)
154 PRK02936 argD acetylornithine 99.9 1.3E-22 2.8E-27 203.8 28.3 297 82-447 47-377 (377)
155 cd00610 OAT_like Acetyl ornith 99.9 6.7E-23 1.5E-27 208.3 25.4 314 82-447 54-413 (413)
156 TIGR01977 am_tr_V_EF2568 cyste 99.9 1E-22 2.2E-27 204.4 25.4 303 82-445 13-375 (376)
157 TIGR03402 FeS_nifS cysteine de 99.9 1.6E-22 3.5E-27 203.2 26.8 305 82-452 12-375 (379)
158 PRK08247 cystathionine gamma-s 99.9 3.9E-22 8.5E-27 198.8 28.9 289 100-449 46-364 (366)
159 TIGR02326 transamin_PhnW 2-ami 99.9 4.3E-22 9.3E-27 199.0 28.9 276 110-447 38-360 (363)
160 PLN02409 serine--glyoxylate am 99.9 5.2E-22 1.1E-26 200.5 29.7 309 81-450 20-373 (401)
161 PRK13479 2-aminoethylphosphona 99.9 1.1E-21 2.4E-26 196.3 31.3 280 109-450 39-364 (368)
162 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.3E-22 2E-26 197.9 30.1 312 82-449 33-381 (387)
163 cd00613 GDC-P Glycine cleavage 99.9 2.6E-22 5.7E-27 203.0 26.3 324 26-443 4-398 (398)
164 PLN02242 methionine gamma-lyas 99.9 6.3E-22 1.4E-26 199.7 28.3 205 108-366 77-303 (418)
165 PRK00011 glyA serine hydroxyme 99.9 4.5E-21 9.8E-26 195.1 34.0 313 82-449 38-389 (416)
166 PRK00854 rocD ornithine--oxo-a 99.9 1.8E-21 3.9E-26 197.0 26.2 300 82-448 59-400 (401)
167 cd06450 DOPA_deC_like DOPA dec 99.9 1.6E-21 3.5E-26 193.4 25.2 282 99-445 26-344 (345)
168 PRK12381 bifunctional succinyl 99.9 2.9E-21 6.4E-26 195.4 27.4 307 82-453 57-403 (406)
169 PRK13520 L-tyrosine decarboxyl 99.9 6.9E-21 1.5E-25 190.8 29.6 305 82-448 33-370 (371)
170 TIGR02080 O_succ_thio_ly O-suc 99.9 3.3E-21 7.1E-26 192.7 27.1 210 100-363 45-272 (382)
171 PRK08045 cystathionine gamma-s 99.9 7.6E-21 1.7E-25 190.1 29.6 210 100-363 46-273 (386)
172 TIGR01437 selA_rel uncharacter 99.9 3.6E-21 7.8E-26 191.5 26.8 292 82-447 26-363 (363)
173 PRK07269 cystathionine gamma-s 99.9 1.5E-21 3.3E-26 193.6 23.9 289 100-448 48-363 (364)
174 PRK06234 methionine gamma-lyas 99.9 4.4E-21 9.6E-26 193.2 27.2 202 105-362 62-287 (400)
175 PRK07505 hypothetical protein; 99.9 1.2E-20 2.5E-25 191.1 30.3 308 82-449 62-399 (402)
176 TIGR00713 hemL glutamate-1-sem 99.9 3.5E-21 7.7E-26 196.1 26.5 314 82-449 66-422 (423)
177 PRK08088 4-aminobutyrate amino 99.9 8.6E-21 1.9E-25 193.0 28.9 324 82-449 59-423 (425)
178 PTZ00125 ornithine aminotransf 99.9 5.1E-21 1.1E-25 193.7 26.3 306 82-450 49-396 (400)
179 PRK06460 hypothetical protein; 99.9 1.5E-20 3.3E-25 187.7 28.9 202 107-362 45-264 (376)
180 PRK06767 methionine gamma-lyas 99.9 7.6E-21 1.6E-25 190.8 26.4 280 100-449 55-385 (386)
181 PLN03227 serine palmitoyltrans 99.9 4.5E-20 9.8E-25 185.5 31.7 330 82-456 14-389 (392)
182 TIGR02006 IscS cysteine desulf 99.9 1.1E-20 2.4E-25 191.2 27.4 306 82-451 16-379 (402)
183 PRK08861 cystathionine gamma-s 99.9 3.3E-20 7.2E-25 185.0 29.8 210 100-362 47-273 (388)
184 PRK00451 glycine dehydrogenase 99.9 1.2E-20 2.6E-25 193.6 27.4 277 110-447 108-446 (447)
185 PRK08133 O-succinylhomoserine 99.9 2.1E-20 4.6E-25 187.6 28.4 200 109-363 63-281 (390)
186 PRK04260 acetylornithine amino 99.9 1.9E-20 4E-25 187.9 27.8 298 82-446 46-374 (375)
187 PRK07504 O-succinylhomoserine 99.9 4.5E-20 9.8E-25 185.6 29.2 208 100-363 59-286 (398)
188 PRK08249 cystathionine gamma-s 99.9 3.3E-20 7.1E-25 186.3 27.6 201 108-363 65-284 (398)
189 PLN02955 8-amino-7-oxononanoat 99.9 3.7E-20 8.1E-25 185.7 27.4 308 82-451 118-463 (476)
190 TIGR03235 DNA_S_dndA cysteine 99.9 2.2E-21 4.8E-26 193.0 18.4 293 82-436 11-345 (353)
191 COG1104 NifS Cysteine sulfinat 99.9 1.8E-20 3.9E-25 180.8 23.6 313 82-455 14-383 (386)
192 TIGR01328 met_gam_lyase methio 99.9 2.9E-20 6.3E-25 186.5 26.1 207 100-363 53-281 (391)
193 PRK14012 cysteine desulfurase; 99.9 3.9E-20 8.5E-25 187.4 27.2 304 82-451 16-381 (404)
194 PRK08776 cystathionine gamma-s 99.9 2.5E-19 5.4E-24 180.2 30.9 202 109-363 62-281 (405)
195 TIGR03246 arg_catab_astC succi 99.9 1E-19 2.2E-24 183.7 28.2 303 82-449 53-395 (397)
196 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.2E-19 4.7E-24 180.1 29.6 271 110-445 62-372 (373)
197 PLN00144 acetylornithine trans 99.9 5.7E-20 1.2E-24 184.1 24.8 305 82-450 33-381 (382)
198 PRK07811 cystathionine gamma-s 99.9 1.6E-19 3.6E-24 181.0 27.2 204 107-363 61-282 (388)
199 cd00614 CGS_like CGS_like: Cys 99.9 1.8E-19 4E-24 180.0 27.1 201 107-363 40-261 (369)
200 PRK07503 methionine gamma-lyas 99.9 3.3E-19 7.2E-24 179.6 29.0 206 101-363 60-287 (403)
201 PRK07050 cystathionine beta-ly 99.9 1.8E-19 3.9E-24 180.8 27.0 283 100-450 59-392 (394)
202 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.9E-19 6.3E-24 179.0 27.6 207 100-363 48-274 (380)
203 PRK07582 cystathionine gamma-l 99.9 4.7E-19 1E-23 176.5 27.5 272 100-449 45-365 (366)
204 PLN02651 cysteine desulfurase 99.9 1.5E-19 3.3E-24 180.6 24.1 292 82-437 12-364 (364)
205 PLN02624 ornithine-delta-amino 99.8 4.3E-19 9.4E-24 182.2 27.7 313 82-454 93-449 (474)
206 PRK07810 O-succinylhomoserine 99.8 4.5E-19 9.8E-24 178.4 27.2 207 100-363 64-291 (403)
207 PRK09028 cystathionine beta-ly 99.8 1.4E-18 3.1E-23 173.2 28.5 209 101-362 53-280 (394)
208 PRK04612 argD acetylornithine 99.8 1.9E-18 4.1E-23 174.2 28.6 308 82-453 58-407 (408)
209 PRK08574 cystathionine gamma-s 99.8 1.4E-18 3E-23 174.0 27.0 204 108-363 54-273 (385)
210 PF04864 Alliinase_C: Allinase 99.8 7E-20 1.5E-24 171.5 16.4 281 109-446 45-362 (363)
211 PF00266 Aminotran_5: Aminotra 99.8 4.1E-18 8.9E-23 170.7 30.4 295 81-439 11-371 (371)
212 PRK06777 4-aminobutyrate amino 99.8 1.1E-18 2.4E-23 177.0 26.2 315 82-448 58-420 (421)
213 PRK08064 cystathionine beta-ly 99.8 2.1E-18 4.6E-23 173.1 27.8 270 109-450 56-383 (390)
214 PRK05968 hypothetical protein; 99.8 2.4E-18 5.2E-23 172.7 28.0 272 109-449 65-386 (389)
215 PRK06918 4-aminobutyrate amino 99.8 2.4E-18 5.2E-23 176.1 27.7 324 82-453 72-447 (451)
216 TIGR00700 GABAtrnsam 4-aminobu 99.8 2.8E-18 6.1E-23 174.3 27.7 319 82-448 51-419 (420)
217 PRK05937 8-amino-7-oxononanoat 99.8 9.8E-18 2.1E-22 167.8 30.5 306 82-453 20-354 (370)
218 PRK13034 serine hydroxymethylt 99.8 1.9E-17 4.1E-22 167.7 32.0 307 82-449 41-392 (416)
219 TIGR01885 Orn_aminotrans ornit 99.8 4E-18 8.7E-23 172.5 26.9 306 82-447 55-400 (401)
220 KOG1412 Aspartate aminotransfe 99.8 1.5E-17 3.1E-22 152.4 27.2 310 98-451 65-407 (410)
221 TIGR01324 cysta_beta_ly_B cyst 99.8 8.6E-18 1.9E-22 167.5 28.3 207 101-362 42-269 (377)
222 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 8.9E-18 1.9E-22 170.2 27.4 148 101-288 52-217 (418)
223 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1E-17 2.2E-22 167.3 27.0 177 82-304 10-208 (376)
224 TIGR01329 cysta_beta_ly_E cyst 99.8 1.7E-17 3.7E-22 165.9 28.3 278 101-449 39-375 (378)
225 KOG1411 Aspartate aminotransfe 99.8 6.4E-18 1.4E-22 156.8 22.8 368 9-448 22-424 (427)
226 cd00616 AHBA_syn 3-amino-5-hyd 99.8 7.6E-18 1.6E-22 167.5 25.1 289 87-444 3-352 (352)
227 PRK13580 serine hydroxymethylt 99.8 1.1E-16 2.3E-21 161.1 32.5 315 82-450 62-446 (493)
228 PLN02509 cystathionine beta-ly 99.8 5.7E-17 1.2E-21 164.6 30.6 211 101-363 125-353 (464)
229 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.1E-17 4.5E-22 165.7 27.1 176 82-303 13-207 (379)
230 PRK07671 cystathionine beta-ly 99.8 2.7E-17 5.9E-22 164.3 27.7 199 109-362 52-269 (377)
231 PRK08360 4-aminobutyrate amino 99.8 5.3E-17 1.1E-21 165.3 29.0 319 82-451 59-428 (443)
232 TIGR03588 PseC UDP-4-keto-6-de 99.8 4.4E-17 9.5E-22 163.8 27.9 302 82-447 9-380 (380)
233 PRK08248 O-acetylhomoserine am 99.8 5.8E-17 1.3E-21 164.1 28.1 141 109-288 66-224 (431)
234 PRK08117 4-aminobutyrate amino 99.8 3.4E-17 7.4E-22 167.1 26.4 320 82-452 61-432 (433)
235 PRK09792 4-aminobutyrate trans 99.8 9.5E-17 2.1E-21 162.8 28.8 317 82-448 58-420 (421)
236 PRK05967 cystathionine beta-ly 99.8 1.6E-16 3.4E-21 158.3 29.6 209 101-362 56-283 (395)
237 PRK04366 glycine dehydrogenase 99.8 1.5E-16 3.3E-21 163.8 30.5 316 82-453 83-452 (481)
238 PRK06176 cystathionine gamma-s 99.8 1.2E-16 2.7E-21 159.6 28.7 199 109-362 52-269 (380)
239 PRK05939 hypothetical protein; 99.8 1.8E-16 4E-21 159.1 29.7 147 102-288 40-206 (397)
240 PRK06084 O-acetylhomoserine am 99.8 1.2E-16 2.6E-21 161.8 28.6 143 109-288 60-218 (425)
241 PRK06702 O-acetylhomoserine am 99.8 6.2E-17 1.4E-21 162.8 26.0 203 109-363 63-314 (432)
242 TIGR01814 kynureninase kynuren 99.8 1E-16 2.3E-21 162.4 27.5 256 128-447 84-405 (406)
243 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.6E-16 3.4E-21 159.3 28.3 297 82-447 10-374 (375)
244 PRK00062 glutamate-1-semialdeh 99.8 5.9E-17 1.3E-21 164.8 25.0 332 36-450 48-425 (426)
245 PRK07495 4-aminobutyrate amino 99.8 1.3E-16 2.8E-21 161.7 27.0 320 82-451 58-423 (425)
246 KOG1359 Glycine C-acetyltransf 99.8 1.6E-16 3.4E-21 144.6 24.0 317 82-450 83-413 (417)
247 COG0075 Serine-pyruvate aminot 99.8 7.9E-16 1.7E-20 149.9 28.9 266 131-452 57-366 (383)
248 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 9.4E-16 2E-20 152.3 29.7 201 110-363 58-278 (386)
249 PTZ00094 serine hydroxymethylt 99.8 1.3E-15 2.8E-20 156.2 31.5 307 82-450 47-409 (452)
250 COG4992 ArgD Ornithine/acetylo 99.8 2.6E-16 5.6E-21 151.9 24.5 306 82-453 60-402 (404)
251 PRK09264 diaminobutyrate--2-ox 99.8 7.2E-16 1.6E-20 156.7 28.5 320 82-453 57-420 (425)
252 KOG1368 Threonine aldolase [Am 99.7 4.6E-16 9.9E-21 141.9 23.3 307 82-450 35-370 (384)
253 PRK15407 lipopolysaccharide bi 99.7 3.9E-15 8.4E-20 151.3 32.4 178 81-304 42-247 (438)
254 KOG1549 Cysteine desulfurase N 99.7 1.5E-16 3.4E-21 154.2 20.9 172 82-288 56-255 (428)
255 COG2008 GLY1 Threonine aldolas 99.7 9E-16 1.9E-20 145.3 25.2 300 81-447 12-341 (342)
256 TIGR02407 ectoine_ectB diamino 99.7 9E-16 2E-20 155.3 26.4 318 82-448 53-411 (412)
257 PRK06058 4-aminobutyrate amino 99.7 1.4E-15 3.1E-20 155.3 26.5 317 82-449 74-442 (443)
258 cd00615 Orn_deC_like Ornithine 99.7 1.2E-16 2.5E-21 154.8 17.3 207 109-357 61-293 (294)
259 PRK03715 argD acetylornithine 99.7 1.5E-15 3.2E-20 152.8 25.4 300 82-450 54-394 (395)
260 PRK07812 O-acetylhomoserine am 99.7 3.5E-15 7.7E-20 151.0 27.9 142 109-288 71-230 (436)
261 PRK05994 O-acetylhomoserine am 99.7 4.5E-15 9.7E-20 150.6 27.9 143 109-288 65-223 (427)
262 KOG1360 5-aminolevulinate synt 99.7 8.7E-16 1.9E-20 145.1 20.7 315 82-450 187-525 (570)
263 COG0626 MetC Cystathionine bet 99.7 6.8E-15 1.5E-19 144.5 26.1 272 109-450 65-395 (396)
264 PRK08114 cystathionine beta-ly 99.7 1.2E-14 2.6E-19 144.7 28.1 198 110-362 65-283 (395)
265 PRK05964 adenosylmethionine--8 99.7 2.5E-15 5.4E-20 152.9 23.6 310 82-450 60-423 (423)
266 PRK08134 O-acetylhomoserine am 99.7 1.5E-14 3.1E-19 146.7 28.3 141 109-288 66-224 (433)
267 COG0399 WecE Predicted pyridox 99.7 6.8E-14 1.5E-18 136.6 29.0 300 82-449 14-373 (374)
268 cd00611 PSAT_like Phosphoserin 99.7 1E-14 2.2E-19 145.1 23.8 293 81-446 10-353 (355)
269 TIGR01364 serC_1 phosphoserine 99.7 4.4E-14 9.6E-19 139.6 27.6 297 81-449 3-348 (349)
270 PLN02724 Molybdenum cofactor s 99.7 2.2E-14 4.9E-19 156.3 27.6 290 109-448 80-487 (805)
271 TIGR03531 selenium_SpcS O-phos 99.7 5.2E-14 1.1E-18 141.6 26.4 292 110-446 104-443 (444)
272 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.6E-13 3.4E-18 136.4 29.0 307 102-449 66-426 (450)
273 PRK03080 phosphoserine aminotr 99.7 3.3E-14 7.1E-19 142.6 24.6 294 81-452 23-376 (378)
274 PRK11522 putrescine--2-oxoglut 99.7 1.5E-13 3.3E-18 140.4 29.5 318 82-456 100-458 (459)
275 PLN03226 serine hydroxymethylt 99.6 5.9E-13 1.3E-17 136.4 33.1 312 82-449 47-419 (475)
276 TIGR00709 dat 2,4-diaminobutyr 99.6 1.5E-13 3.3E-18 140.2 28.8 330 82-453 57-439 (442)
277 PRK06541 hypothetical protein; 99.6 6.7E-14 1.4E-18 143.2 26.1 320 82-452 70-458 (460)
278 KOG0053 Cystathionine beta-lya 99.6 1.8E-13 3.8E-18 132.8 25.7 174 110-321 80-270 (409)
279 PRK05355 3-phosphoserine/phosp 99.6 1.1E-13 2.5E-18 137.4 25.0 296 81-449 14-358 (360)
280 PRK08593 4-aminobutyrate amino 99.6 1.6E-13 3.4E-18 140.1 26.4 323 82-453 60-433 (445)
281 COG0001 HemL Glutamate-1-semia 99.6 3.2E-13 7E-18 131.9 26.8 335 36-452 51-431 (432)
282 COG0160 GabT 4-aminobutyrate a 99.6 3.9E-13 8.5E-18 133.7 27.4 323 82-450 74-446 (447)
283 PRK13237 tyrosine phenol-lyase 99.6 6.2E-13 1.3E-17 132.6 28.7 307 101-449 72-433 (460)
284 PRK05613 O-acetylhomoserine am 99.6 5.5E-13 1.2E-17 135.1 29.0 142 109-288 71-230 (437)
285 PF01041 DegT_DnrJ_EryC1: DegT 99.6 1.2E-13 2.6E-18 137.8 23.9 267 82-414 4-310 (363)
286 TIGR01788 Glu-decarb-GAD gluta 99.6 6.6E-13 1.4E-17 134.2 29.0 323 82-450 54-430 (431)
287 PRK05769 4-aminobutyrate amino 99.6 2.8E-13 6E-18 138.2 26.5 318 82-450 72-440 (441)
288 TIGR03372 putres_am_tran putre 99.6 9.8E-13 2.1E-17 133.5 29.2 309 82-447 93-442 (442)
289 COG0112 GlyA Glycine/serine hy 99.6 1.8E-12 3.9E-17 123.8 28.4 313 82-449 39-390 (413)
290 PRK06434 cystathionine gamma-l 99.6 2.3E-13 4.9E-18 135.6 23.5 197 109-362 66-281 (384)
291 PLN02414 glycine dehydrogenase 99.6 9.6E-13 2.1E-17 143.2 29.5 302 99-452 553-910 (993)
292 PRK04311 selenocysteine syntha 99.6 2.4E-12 5.3E-17 130.9 30.1 315 81-448 98-463 (464)
293 PLN02760 4-aminobutyrate:pyruv 99.6 1E-12 2.2E-17 135.5 26.8 324 82-457 107-499 (504)
294 PRK04013 argD acetylornithine/ 99.5 2.6E-12 5.7E-17 127.3 26.0 291 82-450 42-361 (364)
295 PRK07986 adenosylmethionine--8 99.5 1.3E-12 2.8E-17 132.4 23.2 306 82-449 61-423 (428)
296 PRK06173 adenosylmethionine--8 99.5 1.7E-12 3.6E-17 131.8 24.0 308 82-451 62-427 (429)
297 PF00464 SHMT: Serine hydroxym 99.5 8.5E-12 1.8E-16 123.2 28.1 291 82-430 33-380 (399)
298 PRK06105 aminotransferase; Pro 99.5 3E-12 6.5E-17 131.2 25.9 325 82-459 66-458 (460)
299 PLN02271 serine hydroxymethylt 99.5 3E-11 6.5E-16 122.5 31.9 314 82-448 161-539 (586)
300 PRK02769 histidine decarboxyla 99.5 4.1E-11 9E-16 119.5 32.7 275 109-448 63-371 (380)
301 COG2873 MET17 O-acetylhomoseri 99.5 6.3E-12 1.4E-16 118.9 25.1 145 109-290 64-224 (426)
302 PRK13360 omega amino acid--pyr 99.5 3.6E-12 7.9E-17 129.9 25.0 313 82-450 64-441 (442)
303 PRK05630 adenosylmethionine--8 99.5 3E-12 6.4E-17 129.8 23.9 304 82-449 58-420 (422)
304 PRK07480 putative aminotransfe 99.5 7.2E-12 1.6E-16 128.1 26.5 323 82-455 68-454 (456)
305 PRK06082 4-aminobutyrate amino 99.5 1.3E-11 2.8E-16 126.3 28.2 318 82-454 89-456 (459)
306 PRK09221 beta alanine--pyruvat 99.5 7E-12 1.5E-16 127.9 25.3 313 82-450 67-444 (445)
307 TIGR01366 serC_3 phosphoserine 99.5 2.3E-12 4.9E-17 128.3 21.0 295 80-449 13-360 (361)
308 PRK06943 adenosylmethionine--8 99.5 9.5E-12 2.1E-16 127.2 25.8 314 82-452 72-449 (453)
309 TIGR00508 bioA adenosylmethion 99.5 5.5E-12 1.2E-16 128.2 23.6 306 82-449 63-426 (427)
310 PRK06917 hypothetical protein; 99.5 1.7E-11 3.6E-16 125.2 27.1 326 82-452 49-440 (447)
311 cd01494 AAT_I Aspartate aminot 99.5 5E-13 1.1E-17 117.8 14.0 149 109-288 2-169 (170)
312 PRK07678 aminotransferase; Val 99.5 1.9E-11 4.2E-16 125.0 27.5 323 82-450 65-450 (451)
313 PRK05639 4-aminobutyrate amino 99.5 1.6E-11 3.5E-16 125.5 26.8 322 82-453 71-447 (457)
314 PRK05965 hypothetical protein; 99.5 1.7E-11 3.6E-16 125.7 27.0 318 82-450 64-448 (459)
315 PRK07482 hypothetical protein; 99.5 1.7E-11 3.7E-16 125.7 26.9 321 82-452 68-457 (461)
316 PRK00615 glutamate-1-semialdeh 99.5 8.4E-12 1.8E-16 126.6 24.0 315 82-451 71-430 (433)
317 PLN02880 tyrosine decarboxylas 99.5 2.2E-10 4.7E-15 118.1 34.6 314 101-452 112-487 (490)
318 KOG2862 Alanine-glyoxylate ami 99.5 4.3E-11 9.2E-16 110.5 25.4 303 81-449 28-382 (385)
319 PRK06062 hypothetical protein; 99.5 3.1E-11 6.8E-16 123.4 27.3 316 82-451 71-447 (451)
320 PRK07036 hypothetical protein; 99.5 2.3E-11 4.9E-16 124.9 26.3 327 82-458 69-461 (466)
321 PRK12389 glutamate-1-semialdeh 99.5 3.2E-11 7E-16 122.8 27.1 312 82-449 71-427 (428)
322 PLN02482 glutamate-1-semialdeh 99.5 1E-11 2.2E-16 127.2 23.3 312 82-449 117-473 (474)
323 TIGR00474 selA seryl-tRNA(sec) 99.5 2.6E-11 5.7E-16 123.1 25.8 308 81-443 93-453 (454)
324 PRK12403 putative aminotransfe 99.5 3.2E-11 7E-16 123.6 26.6 319 82-452 72-455 (460)
325 KOG1358 Serine palmitoyltransf 99.4 3.8E-12 8.3E-17 120.7 16.7 325 82-449 110-465 (467)
326 PRK06916 adenosylmethionine--8 99.4 1.1E-11 2.4E-16 127.1 21.6 315 82-450 74-456 (460)
327 PRK07046 aminotransferase; Val 99.4 4.7E-11 1E-15 122.0 26.1 308 82-451 93-452 (453)
328 PRK07483 hypothetical protein; 99.4 5.6E-11 1.2E-15 121.2 26.5 326 82-452 48-440 (443)
329 PRK07030 adenosylmethionine--8 99.4 2.5E-11 5.4E-16 124.4 23.9 315 82-450 65-447 (466)
330 PRK06938 diaminobutyrate--2-ox 99.4 6.8E-11 1.5E-15 121.2 26.2 328 82-451 81-462 (464)
331 PRK15029 arginine decarboxylas 99.4 3.9E-11 8.4E-16 127.4 24.4 157 110-288 208-399 (755)
332 PRK06209 glutamate-1-semialdeh 99.4 6.9E-11 1.5E-15 120.4 25.5 303 82-454 66-410 (431)
333 PRK08742 adenosylmethionine--8 99.4 5.1E-11 1.1E-15 122.1 24.6 317 82-450 82-468 (472)
334 PF01276 OKR_DC_1: Orn/Lys/Arg 99.4 3.2E-12 7E-17 126.7 14.9 230 105-367 63-328 (417)
335 PRK07481 hypothetical protein; 99.4 1.9E-10 4E-15 117.7 28.2 320 82-450 60-446 (449)
336 PLN03032 serine decarboxylase; 99.4 2.8E-10 6.1E-15 112.9 28.5 297 82-445 36-372 (374)
337 COG1103 Archaea-specific pyrid 99.4 1.3E-10 2.8E-15 105.3 23.5 284 110-450 64-381 (382)
338 PRK06149 hypothetical protein; 99.4 2.1E-10 4.6E-15 127.7 30.2 319 82-449 601-970 (972)
339 PLN02590 probable tyrosine dec 99.4 5E-10 1.1E-14 115.7 29.9 313 100-451 159-534 (539)
340 KOG1357 Serine palmitoyltransf 99.4 8.4E-12 1.8E-16 120.4 15.3 296 108-449 183-502 (519)
341 PRK06148 hypothetical protein; 99.4 2.1E-10 4.6E-15 127.8 28.5 320 82-450 640-1011(1013)
342 PRK06931 diaminobutyrate--2-ox 99.4 4.5E-10 9.8E-15 115.1 28.5 328 82-452 76-457 (459)
343 PRK08297 L-lysine aminotransfe 99.4 2.7E-10 5.9E-15 116.2 24.8 204 192-450 225-442 (443)
344 PRK13578 ornithine decarboxyla 99.3 4.5E-10 9.7E-15 118.3 26.4 166 102-288 168-368 (720)
345 PLN02452 phosphoserine transam 99.3 3.6E-10 7.8E-15 112.0 24.2 296 81-448 18-362 (365)
346 PF01212 Beta_elim_lyase: Beta 99.3 5.1E-12 1.1E-16 121.1 9.8 190 82-302 8-218 (290)
347 TIGR03799 NOD_PanD_pyr putativ 99.3 7.4E-09 1.6E-13 107.1 31.7 239 99-367 117-427 (522)
348 KOG1404 Alanine-glyoxylate ami 99.3 7.4E-10 1.6E-14 105.5 22.0 314 82-443 68-432 (442)
349 PRK15400 lysine decarboxylase 99.3 7E-10 1.5E-14 116.7 23.9 300 104-448 191-558 (714)
350 COG0161 BioA Adenosylmethionin 99.3 7.7E-10 1.7E-14 109.7 22.7 321 82-453 62-447 (449)
351 TIGR03251 LAT_fam L-lysine 6-t 99.3 2.6E-09 5.6E-14 108.9 26.9 199 192-445 218-430 (431)
352 TIGR00699 GABAtrns_euk 4-amino 99.3 7.6E-10 1.6E-14 112.8 22.9 214 177-446 239-463 (464)
353 PRK05367 glycine dehydrogenase 99.3 5.1E-09 1.1E-13 114.9 30.0 304 100-452 528-878 (954)
354 TIGR00461 gcvP glycine dehydro 99.3 6.2E-09 1.3E-13 112.6 29.7 304 100-452 516-870 (939)
355 PRK15399 lysine decarboxylase 99.3 4.6E-09 1E-13 110.6 27.9 159 105-288 192-380 (713)
356 KOG1402 Ornithine aminotransfe 99.2 3.5E-09 7.6E-14 98.6 22.0 324 51-448 57-426 (427)
357 PRK12566 glycine dehydrogenase 99.2 5.4E-09 1.2E-13 112.4 26.6 302 100-452 529-879 (954)
358 TIGR01365 serC_2 phosphoserine 99.2 4E-09 8.7E-14 104.7 23.6 299 82-445 16-369 (374)
359 PRK12462 phosphoserine aminotr 99.2 1.7E-08 3.8E-13 99.2 25.8 297 80-453 14-362 (364)
360 COG0076 GadB Glutamate decarbo 99.1 1.2E-08 2.6E-13 103.8 23.7 257 82-374 75-377 (460)
361 PLN02263 serine decarboxylase 99.1 1.6E-07 3.5E-12 95.0 29.8 282 108-451 130-445 (470)
362 PF00202 Aminotran_3: Aminotra 99.0 2.2E-09 4.8E-14 105.9 12.8 238 82-358 34-315 (339)
363 TIGR02617 tnaA_trp_ase tryptop 99.0 5E-07 1.1E-11 89.7 29.0 319 82-449 56-441 (467)
364 COG1982 LdcC Arginine/lysine/o 99.0 5.7E-08 1.2E-12 98.6 22.2 156 102-288 64-245 (557)
365 KOG1401 Acetylornithine aminot 99.0 5.8E-08 1.3E-12 93.4 20.9 213 82-322 74-323 (433)
366 PLN02414 glycine dehydrogenase 99.0 1.8E-07 3.9E-12 102.6 27.0 297 81-445 117-465 (993)
367 PLN02994 1-aminocyclopropane-1 99.0 1E-09 2.3E-14 94.6 7.5 59 102-161 87-147 (153)
368 PLN02974 adenosylmethionine-8- 99.0 2.6E-07 5.5E-12 100.0 27.0 215 192-447 584-816 (817)
369 PF00282 Pyridoxal_deC: Pyrido 99.0 2.5E-07 5.4E-12 92.3 24.9 261 82-372 52-368 (373)
370 PRK05367 glycine dehydrogenase 99.0 3.4E-07 7.3E-12 100.8 27.1 257 111-444 125-437 (954)
371 COG3844 Kynureninase [Amino ac 98.9 2.3E-07 5E-12 86.7 21.4 270 111-450 80-403 (407)
372 COG3033 TnaA Tryptophanase [Am 98.9 1.5E-06 3.3E-11 82.3 25.0 309 100-449 72-444 (471)
373 PF06838 Met_gamma_lyase: Meth 98.9 4.1E-07 8.8E-12 86.9 20.8 146 129-303 68-249 (403)
374 KOG2467 Glycine/serine hydroxy 98.8 6E-06 1.3E-10 78.5 26.6 311 82-448 53-425 (477)
375 COG1921 SelA Selenocysteine sy 98.6 6.5E-06 1.4E-10 80.3 21.3 205 82-322 40-267 (395)
376 PF03841 SelA: L-seryl-tRNA se 98.6 7.5E-08 1.6E-12 92.9 5.4 248 82-359 19-296 (367)
377 KOG1403 Predicted alanine-glyo 98.4 8.6E-05 1.9E-09 68.9 21.9 320 82-452 63-440 (452)
378 TIGR00461 gcvP glycine dehydro 98.3 0.00031 6.7E-09 76.8 26.5 251 128-444 124-426 (939)
379 PF05889 SLA_LP_auto_ag: Solub 98.3 9E-05 2E-09 72.5 20.0 288 122-448 67-389 (389)
380 COG4100 Cystathionine beta-lya 98.2 5.3E-05 1.1E-09 70.4 15.2 167 99-299 56-256 (416)
381 TIGR03811 tyr_de_CO2_Ent tyros 98.2 0.0018 4E-08 68.2 28.6 150 82-237 96-325 (608)
382 COG1932 SerC Phosphoserine ami 98.1 0.0043 9.3E-08 59.8 25.5 299 79-453 14-363 (365)
383 KOG1383 Glutamate decarboxylas 98.0 0.0016 3.4E-08 64.5 21.1 293 108-454 117-451 (491)
384 COG1003 GcvP Glycine cleavage 98.0 0.0029 6.2E-08 62.2 22.7 127 99-239 94-248 (496)
385 KOG1405 4-aminobutyrate aminot 98.0 0.00044 9.5E-09 65.8 16.5 221 174-449 254-483 (484)
386 PF02347 GDC-P: Glycine cleava 97.9 0.0091 2E-07 60.0 24.5 266 106-443 105-429 (429)
387 KOG3843 Predicted serine hydro 97.8 0.00077 1.7E-08 61.7 13.6 293 123-452 69-405 (432)
388 KOG0628 Aromatic-L-amino-acid/ 97.7 0.039 8.4E-07 54.8 25.2 303 109-453 111-475 (511)
389 COG0403 GcvP Glycine cleavage 97.5 0.14 3E-06 50.7 25.3 257 124-446 133-447 (450)
390 PLN02672 methionine S-methyltr 97.4 0.0051 1.1E-07 68.6 16.3 204 90-314 411-639 (1082)
391 PRK12566 glycine dehydrogenase 97.2 0.14 3.1E-06 56.3 24.9 226 155-444 168-439 (954)
392 KOG0629 Glutamate decarboxylas 97.1 0.027 5.9E-07 55.3 16.0 318 99-447 129-507 (510)
393 KOG2790 Phosphoserine aminotra 96.6 0.16 3.4E-06 47.5 16.2 301 81-453 18-368 (370)
394 KOG3846 L-kynurenine hydrolase 94.1 5.7 0.00012 37.9 19.0 142 81-236 79-255 (465)
395 KOG2040 Glycine dehydrogenase 86.2 50 0.0011 35.1 21.1 126 99-236 567-721 (1001)
396 COG2102 Predicted ATPases of P 75.5 19 0.00041 32.9 8.3 84 132-230 3-117 (223)
397 KOG2040 Glycine dehydrogenase 62.7 2.2E+02 0.0048 30.5 22.2 84 338-444 393-478 (1001)
398 PF02571 CbiJ: Precorrin-6x re 51.5 61 0.0013 30.4 7.3 83 132-229 2-97 (249)
399 smart00642 Aamy Alpha-amylase 46.6 53 0.0011 28.6 5.7 27 210-236 68-94 (166)
400 PRK09375 quinolinate synthetas 42.3 65 0.0014 31.4 6.1 104 82-203 18-130 (319)
401 TIGR00290 MJ0570_dom MJ0570-re 39.7 2.8E+02 0.006 25.6 9.5 83 133-229 4-115 (223)
402 COG0514 RecQ Superfamily II DN 38.6 3.4E+02 0.0073 29.0 11.0 93 133-240 38-147 (590)
403 COG0816 Predicted endonuclease 37.7 1.2E+02 0.0025 25.8 6.2 55 173-233 40-97 (141)
404 PF08543 Phos_pyr_kin: Phospho 37.4 85 0.0018 29.2 6.0 56 171-235 41-96 (246)
405 TIGR00289 conserved hypothetic 36.0 2.6E+02 0.0057 25.7 8.8 31 192-229 85-115 (222)
406 COG0352 ThiE Thiamine monophos 34.4 77 0.0017 28.9 4.9 52 175-235 24-75 (211)
407 PF05368 NmrA: NmrA-like famil 34.0 1.7E+02 0.0037 26.5 7.5 46 174-230 54-99 (233)
408 COG0552 FtsY Signal recognitio 33.9 1.8E+02 0.0039 28.5 7.5 91 138-235 151-270 (340)
409 PF02571 CbiJ: Precorrin-6x re 33.8 4E+02 0.0087 24.9 13.2 29 129-160 129-157 (249)
410 PF07745 Glyco_hydro_53: Glyco 33.8 1.1E+02 0.0024 30.0 6.2 62 177-242 27-88 (332)
411 cd06568 GH20_SpHex_like A subg 33.7 46 0.001 32.7 3.7 28 203-230 66-93 (329)
412 PF07687 M20_dimer: Peptidase 33.3 70 0.0015 25.1 4.2 34 421-454 77-111 (111)
413 PRK11145 pflA pyruvate formate 33.3 3.6E+02 0.0079 24.8 9.6 20 206-225 173-192 (246)
414 PRK08057 cobalt-precorrin-6x r 33.3 2.3E+02 0.005 26.5 8.1 85 131-229 3-96 (248)
415 KOG3055 Phosphoribosylformimin 33.2 3.5E+02 0.0077 24.1 9.0 79 131-232 62-140 (263)
416 COG1105 FruK Fructose-1-phosph 32.9 2E+02 0.0042 28.0 7.6 66 167-236 105-170 (310)
417 PRK14454 ribosomal RNA large s 32.8 4.6E+02 0.0099 25.9 10.5 31 200-230 286-320 (342)
418 COG1313 PflX Uncharacterized F 32.0 1E+02 0.0022 29.5 5.4 55 23-107 151-207 (335)
419 COG1509 KamA Lysine 2,3-aminom 31.1 5.4E+02 0.012 25.6 12.2 112 103-233 135-257 (369)
420 COG2256 MGS1 ATPase related to 30.3 80 0.0017 31.7 4.6 54 208-273 83-141 (436)
421 PF03786 UxuA: D-mannonate deh 30.3 45 0.00099 32.8 2.9 39 192-230 25-63 (351)
422 cd06563 GH20_chitobiase-like T 30.2 49 0.0011 32.9 3.3 27 204-230 78-104 (357)
423 COG4050 Uncharacterized protei 30.0 1.2E+02 0.0026 24.7 4.6 30 424-453 121-150 (152)
424 COG2099 CobK Precorrin-6x redu 29.5 3.1E+02 0.0067 25.8 8.0 85 132-229 4-97 (257)
425 COG0296 GlgB 1,4-alpha-glucan 28.9 63 0.0014 34.6 3.8 34 204-237 206-239 (628)
426 COG2515 Acd 1-aminocyclopropan 28.6 4.2E+02 0.0091 25.7 8.8 119 107-236 162-284 (323)
427 TIGR00097 HMP-P_kinase phospho 27.6 1.5E+02 0.0033 27.5 6.0 54 172-234 49-103 (254)
428 COG0826 Collagenase and relate 27.4 1.4E+02 0.0031 29.5 5.9 25 424-448 245-270 (347)
429 cd02742 GH20_hexosaminidase Be 27.3 61 0.0013 31.4 3.3 26 205-230 65-90 (303)
430 PF01902 ATP_bind_4: ATP-bindi 27.3 3E+02 0.0065 25.2 7.6 83 133-229 4-115 (218)
431 PF00455 DeoRC: DeoR C termina 27.1 4.1E+02 0.0088 22.8 11.7 35 111-151 4-39 (161)
432 cd01169 HMPP_kinase 4-amino-5- 27.0 1.6E+02 0.0035 26.9 6.1 54 173-235 51-105 (242)
433 KOG1465 Translation initiation 26.9 5.1E+02 0.011 25.0 9.0 96 128-231 160-270 (353)
434 KOG1201 Hydroxysteroid 17-beta 26.8 4.4E+02 0.0096 25.4 8.7 32 128-160 36-67 (300)
435 PRK10785 maltodextrin glucosid 26.5 1.2E+02 0.0026 32.5 5.6 64 171-237 174-251 (598)
436 PF00128 Alpha-amylase: Alpha 26.3 51 0.0011 31.3 2.6 29 210-238 50-78 (316)
437 KOG1494 NAD-dependent malate d 26.3 2.1E+02 0.0045 27.4 6.2 50 153-205 95-151 (345)
438 TIGR02064 dsrA sulfite reducta 26.2 71 0.0015 32.3 3.6 35 192-226 77-111 (402)
439 smart00732 YqgFc Likely ribonu 26.1 2.7E+02 0.0059 21.1 6.3 53 177-235 41-95 (99)
440 PRK13111 trpA tryptophan synth 25.9 5.6E+02 0.012 24.1 10.3 40 177-229 107-146 (258)
441 cd00958 DhnA Class I fructose- 25.8 2.1E+02 0.0045 26.3 6.5 113 103-234 14-131 (235)
442 PF10609 ParA: ParA/MinD ATPas 25.1 1.7E+02 0.0038 22.1 4.6 33 192-229 25-57 (81)
443 PRK00109 Holliday junction res 25.0 2.9E+02 0.0063 23.2 6.6 60 171-236 39-101 (138)
444 PF03460 NIR_SIR_ferr: Nitrite 24.9 40 0.00087 24.2 1.2 28 197-225 10-37 (69)
445 cd06564 GH20_DspB_LnbB-like Gl 24.9 70 0.0015 31.3 3.2 27 204-230 74-100 (326)
446 PF13727 CoA_binding_3: CoA-bi 24.7 1.8E+02 0.0038 24.8 5.5 44 174-229 129-172 (175)
447 PF02639 DUF188: Uncharacteriz 24.6 2.4E+02 0.0052 23.5 5.9 28 132-160 30-57 (130)
448 PRK06427 bifunctional hydroxy- 24.4 1.8E+02 0.004 27.1 6.0 54 173-235 56-110 (266)
449 COG1091 RfbD dTDP-4-dehydrorha 24.1 4.9E+02 0.011 24.9 8.5 86 133-230 3-97 (281)
450 COG2870 RfaE ADP-heptose synth 24.0 1.3E+02 0.0027 30.3 4.7 48 177-232 131-178 (467)
451 KOG1546 Metacaspase involved i 24.0 6.9E+02 0.015 24.5 9.7 117 102-239 72-210 (362)
452 TIGR03793 TOMM_pelo TOMM prope 23.6 1E+02 0.0022 23.1 3.1 26 192-218 50-75 (77)
453 PRK14467 ribosomal RNA large s 23.4 7.3E+02 0.016 24.5 11.7 103 118-225 171-281 (348)
454 TIGR01949 AroFGH_arch predicte 23.3 2.8E+02 0.0062 25.9 7.0 108 105-231 31-142 (258)
455 cd06570 GH20_chitobiase-like_1 23.3 83 0.0018 30.6 3.4 25 206-230 62-86 (311)
456 PF09885 DUF2112: Uncharacteri 23.1 1.5E+02 0.0033 24.7 4.2 27 424-450 117-143 (143)
457 TIGR00695 uxuA mannonate dehyd 23.1 1.4E+02 0.0031 30.0 4.9 39 192-230 23-61 (394)
458 PRK14456 ribosomal RNA large s 23.0 7.7E+02 0.017 24.6 11.3 105 112-224 192-306 (368)
459 cd06569 GH20_Sm-chitobiase-lik 22.9 88 0.0019 32.2 3.6 27 204-230 89-115 (445)
460 smart00481 POLIIIAc DNA polyme 22.8 2.3E+02 0.0049 20.0 4.9 44 173-229 15-58 (67)
461 PRK12412 pyridoxal kinase; Rev 22.6 1.1E+02 0.0024 28.9 4.0 52 174-234 56-108 (268)
462 PF14097 SpoVAE: Stage V sporu 22.5 2E+02 0.0044 25.1 5.0 37 197-235 27-64 (180)
463 PF13872 AAA_34: P-loop contai 22.5 66 0.0014 31.0 2.4 28 212-239 159-187 (303)
464 PF00728 Glyco_hydro_20: Glyco 22.0 68 0.0015 31.5 2.5 24 207-230 68-91 (351)
465 PF01301 Glyco_hydro_35: Glyco 21.8 1.1E+02 0.0024 29.9 3.9 61 170-231 18-82 (319)
466 PRK03906 mannonate dehydratase 21.7 1.4E+02 0.003 30.0 4.6 39 192-230 23-61 (385)
467 cd06562 GH20_HexA_HexB-like Be 21.5 85 0.0019 31.0 3.1 26 205-230 63-88 (348)
468 COG0379 NadA Quinolinate synth 21.4 3.9E+02 0.0084 26.0 7.2 91 82-185 20-120 (324)
469 PLN03244 alpha-amylase; Provis 21.4 1.1E+02 0.0024 33.7 4.0 40 199-238 428-467 (872)
470 COG2240 PdxK Pyridoxal/pyridox 21.4 5.8E+02 0.013 24.4 8.4 56 173-236 53-115 (281)
471 TIGR03271 methan_mark_5 putati 21.3 1.9E+02 0.0041 24.0 4.4 27 424-450 116-142 (142)
472 PF03652 UPF0081: Uncharacteri 21.1 1.6E+02 0.0034 24.7 4.2 64 167-236 32-99 (135)
473 cd01828 sialate_O-acetylestera 21.1 4.2E+02 0.009 22.4 7.2 50 179-229 74-128 (169)
474 PF14258 DUF4350: Domain of un 21.1 2.5E+02 0.0055 20.0 4.9 35 193-231 35-70 (70)
475 PRK09441 cytoplasmic alpha-amy 20.9 88 0.0019 32.5 3.2 29 210-238 79-107 (479)
476 TIGR02104 pulA_typeI pullulana 20.7 83 0.0018 33.8 3.0 27 211-237 228-254 (605)
477 PF08672 APC2: Anaphase promot 20.4 1E+02 0.0022 21.8 2.5 35 201-235 25-59 (60)
478 smart00839 ELFV_dehydrog Gluta 20.2 3.2E+02 0.0069 21.5 5.6 53 399-455 40-100 (102)
479 PRK03170 dihydrodipicolinate s 20.1 3.3E+02 0.0071 26.0 6.8 53 168-224 14-66 (292)
480 KOG1467 Translation initiation 20.1 4E+02 0.0088 27.5 7.3 125 105-235 323-472 (556)
No 1
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.8e-62 Score=502.15 Aligned_cols=447 Identities=52% Similarity=0.908 Sum_probs=374.1
Q ss_pred CCCChhhhhhhhhhccchhhhhHHHHHHHHHH---------hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCC
Q 041151 4 KALDYESMNENVKKVQYAVRGELYLRASELQK---------EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDD 74 (463)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (463)
+.++..++|+++.+++++.++++...++++++ .|.+||+|++|+|+.+|+.+.+++|+++.....|..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~ 82 (481)
T PTZ00377 3 KSFTVEDINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLED 82 (481)
T ss_pred CcCCccccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcC
Confidence 34667899999999999999999999999987 457999999999987899999999999999888887765
Q ss_pred CCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 75 PNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 75 ~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
+.....+|..+++++.+++.........|+++.|.++||++||+|+.+++|+++++++|++|+|+++++..++.+++.+|
T Consensus 83 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~ 162 (481)
T PTZ00377 83 PSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDP 162 (481)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCC
Confidence 55556689999999887766533345789999999999999999999999999999999999999999999999996259
Q ss_pred CCEEEEc-------------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHH
Q 041151 155 GDGVVLL-------------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLR 215 (463)
Q Consensus 155 gd~Vlvp-------------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~ 215 (463)
||.|+++ .|+++ .+++|++|+ +.|++.+++....+.++|+|+++|||||||.++|.++++
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~-~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~ 241 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQ-EELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVME 241 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCH-HHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHH
Confidence 9999997 66665 345689999 999999986444444689999999999999999999999
Q ss_pred HHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC----CceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 216 EILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK----EVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 216 ~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
+|+++|++|+++||+||+|.++.|+++.++.++..+.+++ +. ..++|+++||||+++++||||+||+++.++
T Consensus 242 ~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l----~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~ 317 (481)
T PTZ00377 242 EIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLEL----PAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI 317 (481)
T ss_pred HHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhh----cccccCCeEEEEEecCCcccccCCcCceEEEEEeCC
Confidence 9999999999999999999999884334556666554444 33 237999999999844899999999984223
Q ss_pred ChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCcee
Q 041151 292 PPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAM 371 (463)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~ 371 (463)
++++++.+.+.....++++.+.|.++..+++.....++.++.+.++++.+++.|+++++.+.+.|++++|+.+..|+|+|
T Consensus 318 p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~ 397 (481)
T PTZ00377 318 PPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAM 397 (481)
T ss_pred CHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeE
Confidence 78999999887764567899999999999976543455677788888888889999999999999998899999999999
Q ss_pred EEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 372 YSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
|+|+++++|..........+..++..++..+++++||.+.||+.|+..++.+++|||++.+++++++++++|++++++++
T Consensus 398 fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 398 YAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred EEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 99988877654433222333344666778899999999999999986445679999999777899999999999999999
Q ss_pred HHhc
Q 041151 452 EQYE 455 (463)
Q Consensus 452 ~~~~ 455 (463)
++|+
T Consensus 478 ~~~~ 481 (481)
T PTZ00377 478 KKYG 481 (481)
T ss_pred HhhC
Confidence 9984
No 2
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.4e-61 Score=499.92 Aligned_cols=449 Identities=51% Similarity=0.863 Sum_probs=380.6
Q ss_pred CChhhhhhhhhhccchhhhhHHHHHHHHHHhc---------ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCC
Q 041151 6 LDYESMNENVKKVQYAVRGELYLRASELQKEG---------KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPN 76 (463)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (463)
++...+|+++.+.++.+.+.|...+.++++++ .+||.+++|+|..+|+.|.++.|+++.+++.|+.++.+.
T Consensus 57 ~~~~~~~~~~~~~~y~vrg~~~~~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~ 136 (534)
T PLN02231 57 VTLDTINPKVLKCEYAVRGEIVTIAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSE 136 (534)
T ss_pred CChhhcCHHHHHhhhhccchHHHHHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCC
Confidence 45678999999999999999999999998876 369999999999999999999999999999999987765
Q ss_pred CCCCCcHHHHHHHHHHhhhcC-CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC
Q 041151 77 VGIVFPADAIARAKHYLSLTS-GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 77 ~~~~~p~~~~~a~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 155 (463)
....||..+++++.+.+.... .....|+++.|.++||++||+|+.+++|+++++++|++|+|+++++..++.+++..+|
T Consensus 137 ~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~g 216 (534)
T PLN02231 137 THGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEK 216 (534)
T ss_pred ccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCC
Confidence 567789999999988776542 2467899999999999999999998899999999999999999999999999962479
Q ss_pred CEEEEc-------------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 156 DGVVLL-------------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 156 d~Vlvp-------------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
|.|++| +|+++ .+++|++|+ ++|++.+++....+.++|+|+++|||||||.++|.+++++
T Consensus 217 d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~-~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~ 295 (534)
T PLN02231 217 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEI-SELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRD 295 (534)
T ss_pred CEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCH-HHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHH
Confidence 999997 66665 234689999 9999999875444446899999999999999999999999
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
|+++|++++++||+||+|.++.|.++.++.++..+..+++.+ ..+.++|+++||||.++|+||+|+||+++++.+++++
T Consensus 296 Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~-~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~ 374 (534)
T PLN02231 296 IVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYG-EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR 374 (534)
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccc-cCCceEEEEeccCcccccCCccceEEEEEecCCHHHH
Confidence 999999999999999999999984345566777665433110 1234799999999986589999999998532378899
Q ss_pred HHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeee
Q 041151 297 DEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQ 376 (463)
Q Consensus 297 ~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~ 376 (463)
+.+.+......+++.+.|.++..+++.+..+++.|+.+.++.+.+++.|+++++++.+.|++++|+.+..|+|+||+|++
T Consensus 375 ~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~ 454 (534)
T PLN02231 375 EQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPR 454 (534)
T ss_pred HHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEecc
Confidence 99988776556778899999999987654445688888888888999999999999999999889999999999999988
Q ss_pred ccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHHhcc
Q 041151 377 IRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQYED 456 (463)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~~~~ 456 (463)
+++|.+.++..+..+..++..++..+++++||.+.||+.|+..++..++|+++..+++++++++++|++++++++++|+|
T Consensus 455 l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~~~~~ 534 (534)
T PLN02231 455 IHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMDEFRD 534 (534)
T ss_pred ccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88776544443433444566677888999999999999998655667899999988899999999999999999999985
No 3
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-58 Score=459.79 Aligned_cols=362 Identities=26% Similarity=0.433 Sum_probs=309.2
Q ss_pred hccchhhhhHHHHHHHHHHh-c-ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhh
Q 041151 17 KVQYAVRGELYLRASELQKE-G-KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLS 94 (463)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~-~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~ 94 (463)
+..++..+.+...+.+..+. + .++|+|++|+|++ |. |+.+++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd~------------------------~~-----p~~i~~a~~~a~~ 55 (393)
T COG0436 5 KVLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPDF------------------------PT-----PEHIIEAAIEALE 55 (393)
T ss_pred ccCcchhHHHHhHHHHHHHhcCCCCEEEeCCCCCCC------------------------CC-----CHHHHHHHHHHHh
Confidence 34455555565533344433 2 4799999999997 55 8999999999888
Q ss_pred hcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCc-EEEcCCcHHHHHHHHHHHhcCCCCEEEEc------------
Q 041151 95 LTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPEL-IFLTDGASKGVMQTLNCVIRGEGDGVVLL------------ 161 (463)
Q Consensus 95 ~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------ 161 (463)
.. .. .|.+.+|.++||++|++++.+++|+.+++++ |++|+|+++++..++.+++ +|||+|++|
T Consensus 56 ~~--~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~-~pGDeVlip~P~Y~~y~~~~~ 131 (393)
T COG0436 56 EG--GT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL-NPGDEVLIPDPGYPSYEAAVK 131 (393)
T ss_pred cc--cC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCcCHHHHHH
Confidence 72 22 7779999999999999999999999999886 9999999999999999998 999999997
Q ss_pred -cCcee---c---C-CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccc
Q 041151 162 -FHTTW---K---R-QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEV 233 (463)
Q Consensus 162 -~g~~~---~---~-~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Dea 233 (463)
.|+++ + . ++|.+|+ +.|++++++ ++|+|++|+||||||.+++++++++|+++|++||++||+||+
T Consensus 132 ~~gg~~v~v~l~~~~~~f~~d~-~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi 204 (393)
T COG0436 132 LAGGKPVPVPLDEEENGFKPDL-EDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI 204 (393)
T ss_pred hcCCEEEEEeCCcCccCCcCCH-HHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh
Confidence 77776 2 2 5899999 999999998 899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC-hhHHHHHHhhhh-hcccCCh
Q 041151 234 YQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-PKTVDEIYKIAS-IALSPNV 311 (463)
Q Consensus 234 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-~~~~~~l~~~~~-~~~~~~~ 311 (463)
|..+.| ++..+.++..+. +..+++|++.||||++ +|+|||+||++ ++ +++++.+.+++. ..++++.
T Consensus 205 Y~~l~y-d~~~~~s~~~~~-------~~~~~~i~i~s~SK~~-~mtGwRvG~~v---~~~~~l~~~~~~~~~~~~~~~~~ 272 (393)
T COG0436 205 YEELVY-DGAEHPSILELA-------GARDRTITINSFSKTY-GMTGWRIGWVV---GPPEELIAALRKLKSYLTSCAPT 272 (393)
T ss_pred hhhccc-CCCCcCCHhhcC-------CCcceEEEEecccccc-cccccceeEee---cChHHHHHHHHHHHHhcccCCCH
Confidence 999999 444566776642 2136899999999999 99999999999 46 889999998876 6779999
Q ss_pred HHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CCceeEEeeeccCChhhHHHHhhc
Q 041151 312 PAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-TEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 312 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
+.|.++..+|+... . ....+.+++.|++||+.+.+.|++.+|+.+.. |+|+||+|++++..
T Consensus 273 ~~Q~aa~~aL~~~~-------~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~---------- 334 (393)
T COG0436 273 PAQYAAIAALNGPQ-------S-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL---------- 334 (393)
T ss_pred HHHHHHHHHhcCcc-------c-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC----------
Confidence 99999999998543 1 23344567899999999999999998899988 89999999777632
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.++.+++.++|+++||.+.||+.||...|.+++|||++.+.+++++++++++++++++
T Consensus 335 --~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 335 --LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred --CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 2588999999999999999999999855788999999977799999999999988754
No 4
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-57 Score=420.19 Aligned_cols=445 Identities=58% Similarity=0.947 Sum_probs=413.4
Q ss_pred CCCCCChhhhhhhhhhccchhhhhHHHHHHHHHHhccc--------ceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCC
Q 041151 2 APKALDYESMNENVKKVQYAVRGELYLRASELQKEGKK--------IIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLD 73 (463)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (463)
.-+.+++.++|+++.+..+.+.++|.-.+.+++.+.++ ||..++|+|..+||.|.+|+|+++.+|+.|.+++
T Consensus 4 ~~~~lt~~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd 83 (475)
T KOG0258|consen 4 SAKALTLDSLNPNVKKAEYAVRGPIVIRADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLD 83 (475)
T ss_pred cccccchhhcChhhhhhhhhhccchhhhHHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcC
Confidence 45678899999999999999999999999999987665 9999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC
Q 041151 74 DPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG 153 (463)
Q Consensus 74 ~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 153 (463)
.|. ||.++++++...+...++....|+.++|.+-+|+.+|+|+.++.|++.+|++|++|.|++.++..++..++..
T Consensus 84 ~~~----fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~ 159 (475)
T KOG0258|consen 84 SPE----FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG 159 (475)
T ss_pred CCC----CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC
Confidence 887 6999999999999998778899999999999999999999999999999999999999999999999999867
Q ss_pred CCCEEEEc-------------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 154 EGDGVVLL-------------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 154 ~gd~Vlvp-------------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
+.+.|++| +|+.. .+.+|++|. ++|++.+++.. ++-+++++++.||.||||.++|++.+
T Consensus 160 ~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~-~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~i 237 (475)
T KOG0258|consen 160 KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDV-AELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENI 237 (475)
T ss_pred CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCH-HHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHH
Confidence 88999998 34333 678999999 99999999876 56689999999999999999999999
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|+.+|.+++++++.||+|.+-.|.++.++.|+..++.+||.+..+...++.++|.||.+.|-.|.|.||+-+.+-+++
T Consensus 238 e~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~pr 317 (475)
T KOG0258|consen 238 EGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPR 317 (475)
T ss_pred HHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChh
Confidence 99999999999999999999999997777899999999999666555678899999999998999999999988777888
Q ss_pred HHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEe
Q 041151 295 TVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSF 374 (463)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~ 374 (463)
..+.+.+..+...+++...|..+-..++.+..++.+|+.+.++.+.+.+.++++.+.+.+.+++++|+.+.+++|.+|+|
T Consensus 318 v~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~f 397 (475)
T KOG0258|consen 318 VKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLF 397 (475)
T ss_pred HHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeec
Confidence 99999888887889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
.++.+|.+.+.+++..+..+|.-.|.+||+..||.++||+.||..+|..++|.++-... + ..+++++++-.+++++|
T Consensus 398 P~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~Y 474 (475)
T KOG0258|consen 398 PQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDEY 474 (475)
T ss_pred ccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999653 5 99999999999999987
Q ss_pred c
Q 041151 455 E 455 (463)
Q Consensus 455 ~ 455 (463)
+
T Consensus 475 ~ 475 (475)
T KOG0258|consen 475 R 475 (475)
T ss_pred C
Confidence 5
No 5
>PLN02368 alanine transaminase
Probab=100.00 E-value=8.5e-55 Score=436.94 Aligned_cols=383 Identities=89% Similarity=1.375 Sum_probs=316.0
Q ss_pred CCCCCCChhhhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCC
Q 041151 1 MAPKALDYESMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIV 80 (463)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (463)
|.-+.++...+|+++.+++++.++.+...+++++++|.++|+|++|+|++.|+.|.+|.|+++.++++++....|.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 80 (407)
T PLN02368 1 MSLKALDYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLL 80 (407)
T ss_pred CCCCCCChhhcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCcccccc
Confidence 55567788899999999999999999999999999999999999999999999999999999999999998876642234
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
+|+..+.++...+........+|+++.|.++||++||+|+.+++|+.+++++|++|+|+++++..++.+++.+|||.|++
T Consensus 81 ~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli 160 (407)
T PLN02368 81 FPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLV 160 (407)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEE
Confidence 56677777665543211246789999999999999999999888999999999999999999999999985359999999
Q ss_pred c-------------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 161 L-------------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 161 p-------------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
| .|+++ .+++|++|+ +.|++.+++....+.++|+|+++|||||||.++|.+++++|+++|
T Consensus 161 ~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~-~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a 239 (407)
T PLN02368 161 PVPQYPLYSATISLLGGTLVPYYLEESENWGLDV-NNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFC 239 (407)
T ss_pred eCCCCccHHHHHHHcCCEEEEEecccccCCCCCH-HHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 7 66665 234689999 999999975322233689999999999999999999999999999
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
++|+++||+||+|.++.|++..++.++..+..++.-+..+.+++|+++||||+|+|+||||+||+++.++++++++.+.+
T Consensus 240 ~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~ 319 (407)
T PLN02368 240 YQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYK 319 (407)
T ss_pred HHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHH
Confidence 99999999999999999843234556665543330000234589999999999746999999999843337889999988
Q ss_pred hhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCCh
Q 041151 302 IASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 302 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~ 381 (463)
.....++++.+.|.++..+++....++..+..+.++++++++.|++|++++.+.|+++||+.+..|+|+||+|+++.+|.
T Consensus 320 ~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp~ 399 (407)
T PLN02368 320 VASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLPP 399 (407)
T ss_pred HhcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCCH
Confidence 75446788999999999999754323345556667767789999999999999999999999999999999999999987
Q ss_pred hhH
Q 041151 382 KAI 384 (463)
Q Consensus 382 ~~~ 384 (463)
+.+
T Consensus 400 ~~~ 402 (407)
T PLN02368 400 KAI 402 (407)
T ss_pred HHH
Confidence 643
No 6
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.8e-52 Score=433.55 Aligned_cols=376 Identities=23% Similarity=0.386 Sum_probs=306.2
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.+|+++.+++++.++.+...++++++.|+++|+|+.|+|+.++. +. |+.+++++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~---------------------~~-----p~~~~~~~ 171 (517)
T PRK13355 118 KKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGF---------------------RT-----PDEVVYDM 171 (517)
T ss_pred ChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCC---------------------CC-----CHHHHHHH
Confidence 47999999999999999999999998999999999999973221 32 88899999
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+++.. ..+|+++.|.++||++||+|+..+++..+++++|++|+|+++++..++.+++ ++||+|++|
T Consensus 172 ~~~~~~----~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~-~~Gd~Vli~~P~y~~y~ 246 (517)
T PRK13355 172 AQQLTD----TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL-DDGDEVLIPSPDYPLWT 246 (517)
T ss_pred HHHhhc----CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC-CCCCEEEEcCCCCcCHH
Confidence 887654 3579999999999999999998776667899999999999999999999998 999999997
Q ss_pred -----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ .+.+|.+|+ +.+++.+.+ ++|+|+++|||||||.+++.+++++|+++|++|+++||+
T Consensus 247 ~~~~~~g~~~v~~~~~~~~~~~~d~-~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~ 319 (517)
T PRK13355 247 ACVNLAGGTAVHYRCDEQSEWYPDI-DDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFS 319 (517)
T ss_pred HHHHHCCCEEEEeecCcccCCCCCH-HHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 66665 234688999 999998876 899999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh----HHHHHHhhhhhc
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK----TVDEIYKIASIA 306 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~~~~ 306 (463)
||+|.++.| ++..+.++..+ ..+..+|+++||||+| ++||||+||++++ ++++ +++.+.......
T Consensus 320 DE~Y~~~~~-~~~~~~s~~~~--------~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~-~~~~~~~~~~~~l~~~~~~~ 388 (517)
T PRK13355 320 DEIYDRLVM-DGLEHTSIASL--------APDLFCVTFSGLSKSH-MIAGYRIGWMILS-GNKRIAKDYIEGLNMLANMR 388 (517)
T ss_pred ehhhhhhcC-CCCCcccHHHh--------CCCCeEEEEecchhhc-cCcccceEEEEee-CchhhHHHHHHHHHHHhcCc
Confidence 999999988 44455676655 3334688899999999 9999999999853 1343 344454444444
Q ss_pred ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHH
Q 041151 307 LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEA 386 (463)
Q Consensus 307 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~ 386 (463)
.+++.+.|.++..+|... ..+..+.. ..+ ++.++++++.+.|+++||+.+..|+|+||+|++++...
T Consensus 389 ~~~~~~~q~a~~~aL~~~----~~~~~~~~---~~~-~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~----- 455 (517)
T PRK13355 389 LCSNVPAQSIVQTALGGH----QSVKDYLV---PGG-RVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKK----- 455 (517)
T ss_pred CCcChHHHHHHHHHhcCC----ccHHHHHH---HHH-HHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCccc-----
Confidence 678899999999998531 22333433 233 34456799999999988999999999999997664211
Q ss_pred HhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 387 AKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 387 ~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.++.++.+++..+|+++||.|.||+.|+. .+.+++||+++.++++|++++++|++++++++
T Consensus 456 ---~~~~~~~~~~~~ll~~~gV~v~pg~~F~~-~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 456 ---FNIHDDEQFALDLLHDKKVLIVQGTGFNW-DKPDHFRVVYLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred ---CCCCCHHHHHHHHHHhCCEEEeCcchhCC-CCcCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 01224667788899999999999999975 35569999999888999999999999987653
No 7
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-54 Score=408.29 Aligned_cols=377 Identities=20% Similarity=0.286 Sum_probs=317.3
Q ss_pred ChhhhhhhhhhccchhhhhHHHHHHHHHHhccccee-ccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHH
Q 041151 7 DYESMNENVKKVQYAVRGELYLRASELQKEGKKIIF-TNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADA 85 (463)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 85 (463)
.+...+.++...+++++.++.+.+.|.. +.+ |+.|.|++ |. |+.+
T Consensus 4 ~~~~~~~~l~~~~~~vw~e~~~la~e~~-----~~~~LgqGfp~~------------------------~~-----P~fv 49 (420)
T KOG0257|consen 4 FKRLRNRNLSTSKPYVWTEINRLAAEHK-----VPNPLGQGFPDF------------------------PP-----PKFV 49 (420)
T ss_pred ccccccccccccCCcHHHHHHHHHHhcC-----CCCcccCCCCCC------------------------CC-----cHHH
Confidence 3445577888888888888877665544 234 99999997 65 8999
Q ss_pred HHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---
Q 041151 86 IARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL--- 161 (463)
Q Consensus 86 ~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--- 161 (463)
.+++++++.. ...++|.+..|+++|+++|++.+.+.||....++ +|+||+|+.++|..++++++ ++||+|++.
T Consensus 50 ~ea~~~~~~~--~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~-~~GDeVii~eP~ 126 (420)
T KOG0257|consen 50 TEAAKNAAKE--PSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL-NPGDEVIVFEPF 126 (420)
T ss_pred HHHHHHHhcc--chhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-CCCCEEEEecCc
Confidence 9999999887 3678999999999999999999999898877666 79999999999999999998 999999995
Q ss_pred ----------cCcee------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHH
Q 041151 162 ----------FHTTW------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILR 219 (463)
Q Consensus 162 ----------~g~~~------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~ 219 (463)
+|+++ ....|.+|+ +.|+.++++ +||+|++|+||||||.++|+++|++|++
T Consensus 127 fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~-~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~ 199 (420)
T KOG0257|consen 127 FDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDP-EELESKITE------KTKAIILNTPHNPTGKVFSREELERIAE 199 (420)
T ss_pred chhhhhHHhhcCCcceeeccccccccccCccccCCh-HHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 66665 356899999 999999999 9999999999999999999999999999
Q ss_pred HhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 220 FCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 220 ~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
+|++||++||.||+|..+.| ++..+.+++.+ |+| .+ ++|.++|+||+| |++|||+||++ +++.++..+
T Consensus 200 l~~k~~~lvisDevYe~~v~-d~~~h~r~asl-Pgm----~e--rtitvgS~gKtf-~~TGWrlGW~i---gp~~L~~~~ 267 (420)
T KOG0257|consen 200 LCKKHGLLVISDEVYEWLVY-DGNKHIRIASL-PGM----YE--RTITVGSFGKTF-GVTGWRLGWAI---GPKHLYSAL 267 (420)
T ss_pred HHHHCCEEEEEhhHhHHHhh-CCCcceeeecC-Cch----hh--eEEEecccccee-eeeeeeeeeee---chHHhhhhH
Confidence 99999999999999999999 56667777776 887 44 899999999999 99999999999 799999999
Q ss_pred Hhhhh-hcccCChHHHHHHHHhcCCCCCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeee
Q 041151 300 YKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYE--QFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQ 376 (463)
Q Consensus 300 ~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~ 376 (463)
..+++ ..+.++.+.|.|.+++++... ... .......++.+.|+++|+.|.+.|.++ |+++..|+|+||+|++
T Consensus 268 ~~vh~~~~~~~~Tp~q~A~a~a~~~~~----~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~ad 342 (420)
T KOG0257|consen 268 FPVHQNFVFTCPTPIQEASAAAFALEL----ACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWAD 342 (420)
T ss_pred HHHhhccccccCcHHHHHHHHHHhhhh----hccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEe
Confidence 98886 678899999999988876432 100 001234457889999999999999999 9999999999999999
Q ss_pred ccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCC----CcEEEEEecCCcCcHHHHHHHHH
Q 041151 377 IRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEG----IFHLRTTILPAEEDMPAIMESFK 444 (463)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~----~~~lRis~~~~~e~i~~~~~~l~ 444 (463)
+.++..+-.........++-.++..++++.|+.+.|++.|+..+. .+++|+++..+++.++.++++|+
T Consensus 343 fs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 343 FSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred ccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 885544322222333446778888999999999999999997532 45789999988899999998887
No 8
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-50 Score=376.80 Aligned_cols=372 Identities=22% Similarity=0.298 Sum_probs=315.8
Q ss_pred hccchhhhhHHHHHHHHHHhc--ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhh
Q 041151 17 KVQYAVRGELYLRASELQKEG--KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLS 94 (463)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~ 94 (463)
+...-++|.+........... +++|.++.|+|+.++- ++. .+.+.+|+.+++.
T Consensus 38 ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~--------------------~~t-----s~~a~~Av~~al~ 92 (447)
T KOG0259|consen 38 KAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPC--------------------FRT-----SQEAEQAVVDALR 92 (447)
T ss_pred hhccccHHHHHHHHhhcCCcccCceeccCCCCCCCcccc--------------------ccC-----CHHHHHHHHHHHh
Confidence 344555666665554444333 4799999999997442 233 6788889999988
Q ss_pred hcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------
Q 041151 95 LTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------------- 161 (463)
Q Consensus 95 ~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------- 161 (463)
+ +..++|+|+.|....|+++|+|++++....+++++|++|+|++|||..++.+|. +||..|++|
T Consensus 93 S--gk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp~Y~~~a~~ 169 (447)
T KOG0259|consen 93 S--GKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFPLYDTRAIY 169 (447)
T ss_pred c--CCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCchHHHhhhh
Confidence 7 578899999999999999999998887788999999999999999999999999 999999998
Q ss_pred cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 162 FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 162 ~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
.|.++ ++.+|.+|+ +.+|..+.+ +|.+|+++|||||+|.++|.+.|++|++.|+++++.||.||+|.
T Consensus 170 ~~lEVR~ydlLPe~~weIDL-~~veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~ 242 (447)
T KOG0259|consen 170 SGLEVRYYDLLPEKDWEIDL-DGVEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYG 242 (447)
T ss_pred cCceeEeecccCcccceech-HHHHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcc
Confidence 45554 899999999 999999998 89999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC-----CChhHHHHHHhhhhhcccCC
Q 041151 236 QNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN-----IPPKTVDEIYKIASIALSPN 310 (463)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~-----~~~~~~~~l~~~~~~~~~~~ 310 (463)
++.| ++.++.++..+ .....+|.++|+||-| =.||||+||+++-+ .+..+++.+.+..+...+++
T Consensus 243 ~~vf-g~~pfvpmg~f--------ssiVPVitlggisKrW-~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~ 312 (447)
T KOG0259|consen 243 HTVF-GDKPFVPMGKF--------SSIVPVITLGGISKRW-IVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPA 312 (447)
T ss_pred eeec-CCCCccchhhc--------cccCceEeeccccccc-ccCCceeeeEEEecccccccchHHHHHHHHHHhccCCcc
Confidence 9999 67888887766 5566899999999999 79999999999843 12245577777777788999
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhHHHHhh
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
.+.|.|+-.+|+... + +........++.+.+..++.|+++|++. ...|+|.+|+|+.+++.. +
T Consensus 313 TiiQ~AlP~IL~kTp---~------efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~-------~ 376 (447)
T KOG0259|consen 313 TIIQGALPDILEKTP---E------EFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSL-------F 376 (447)
T ss_pred HhHHHHhHHHHHhCh---H------HHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhh-------h
Confidence 999999999987432 1 2234567789999999999999999998 578999999997765331 2
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
..+++|.+|+.++.+|+.+.+.||..|+.+ +|+|+++....+.+++++.||+.|+.++.+
T Consensus 377 ~~~~dD~dFc~kL~~Eesv~~LPG~af~~~---nw~Ri~i~~~~~~leea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 377 PDIEDDVDFCQKLAREESVICLPGQAFGLK---NWLRIVITVEEEMLEEAFSRIKEFCDRHSK 436 (447)
T ss_pred ccccccHHHHHHHhhhcceEEeccccccCC---CeEEEEEccChHHHHHHHHHHHHHHHhhhh
Confidence 246789999999999999999999999974 399999998889999999999999999873
No 9
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1e-50 Score=408.83 Aligned_cols=364 Identities=21% Similarity=0.312 Sum_probs=293.5
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++..++.+.+..+...+++.+..|+++|+|+.|+|++ +. |+.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~ 53 (388)
T PRK07366 3 FAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDL------------------------PA-----PAHALEAIA 53 (388)
T ss_pred hhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5778888888888888788888888899999999999885 43 778888888
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+.+.. ....+|+++.|.++||+++|+|+.+.+|+.++++ +|++|+|+++++..++.+++ +|||.|+++
T Consensus 54 ~~~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~ 130 (388)
T PRK07366 54 QSLHD--PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL-NPGDFALLLDPGYPSHA 130 (388)
T ss_pred HHHhC--cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchH
Confidence 77654 2456899999999999999999998899999998 79999999999999999998 899999997
Q ss_pred -----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ .+.++.+|+ +++++.+.. ++|+|++|+||||||.++|.+++++|+++|++|+++||+
T Consensus 131 ~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 203 (388)
T PRK07366 131 GGVYLAGGQIYPMPLRAENDFLPVF-ADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVH 203 (388)
T ss_pred HHHHhcCCEEEEEECCCccCCCCCH-HHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEE
Confidence 66666 234577888 999887765 789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|++.....++..+. ....++|+++||||+| |+||+|+||++ +++++++.+.+... ...+.
T Consensus 204 De~Y~~~~~~~~~~~~~~~~~~-------~~~~~vi~~~SfSK~~-g~~GlRiG~~v---~~~~li~~l~~~~~~~~~~~ 272 (388)
T PRK07366 204 DFPYVDLVFDGEVEPPSILQAD-------PEKSVSIEFFTLSKSY-NMGGFRIGFAI---GNAQLIQALRQVKAVVDFNQ 272 (388)
T ss_pred ecchhhcccCCCCCCCChhhCC-------CCcccEEEEeeccccc-CCcchhheehc---CCHHHHHHHHHHHhhcccCC
Confidence 9999999883222244554431 1224689999999999 99999999999 69999999988876 34444
Q ss_pred Ch-HHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHh
Q 041151 310 NV-PAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 310 ~~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
+. +.|.++..+.. ..++.+++++.|+++++.+.+.|+++ |+.+..|+|++|+|++++ ...
T Consensus 273 ~~~~~~~a~~~l~~-----------~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~--~~~----- 333 (388)
T PRK07366 273 YRGILNGAIAALTG-----------PQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLP--EPW----- 333 (388)
T ss_pred CHHHHHHHHHHHhC-----------cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECC--ccc-----
Confidence 33 34444444322 12445678899999999999999988 888788999999996654 210
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
..++.+++..+++++||.+.||+.|+.. +.+|+||+++.+++++++++++|++++
T Consensus 334 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~-~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 334 ---QGNSVEFCTQLVAQTGVAASPGSGFGKS-GEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred ---CCCHHHHHHHHHHhCCEEEeCchHhCcC-CCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 0124566677778899999999999752 446999999977899999999998763
No 10
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.9e-50 Score=411.26 Aligned_cols=372 Identities=22% Similarity=0.319 Sum_probs=289.2
Q ss_pred hhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCC
Q 041151 22 VRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLG 101 (463)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~ 101 (463)
.++.+...+++.+..|+++++|++|+|+.++. +. |+.+.+++.+.+.. ....
T Consensus 16 ~~~~~~~~~~~~~~~g~~~~~~~~G~p~~~~~---------------------~~-----p~~~~~a~~~~~~~--~~~~ 67 (433)
T PRK06855 16 EIRNIVAVAKKLEKLGVKITWENIGDPIAKGE---------------------KI-----PDWMKEIVAELVMD--DKSY 67 (433)
T ss_pred HHHHHHHHHHHHHhccccccccccCCCcccCC---------------------CC-----CHHHHHHHHHHhhc--CCCC
Confidence 45556666777777788999999999963111 32 77788787776654 2557
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------cCcee-
Q 041151 102 AYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------FHTTW- 166 (463)
Q Consensus 102 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~g~~~- 166 (463)
+|++..|.++||+++++|+.+++|+.+++++|++|+|++++|..++. ++ +|||.|+++ .|+++
T Consensus 68 ~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~-~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v 145 (433)
T PRK06855 68 GYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL-RREARVIGPSPAYSTHSSAEAAHAGYPPV 145 (433)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc-CCCCeEEEeCCCCchHHHHHHHhcCCeEE
Confidence 89999999999999999999889999999999999999999999985 66 899999997 24443
Q ss_pred -----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 167 -----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 167 -----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
..++|++|+ ++|++.++.. ++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.| +
T Consensus 146 ~v~~~~~~~~~~d~-~~l~~~~~~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~-~ 219 (433)
T PRK06855 146 TYRLDPENNWYPDL-DDLENKVKYN----PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVY-N 219 (433)
T ss_pred EEecccccCCCCCH-HHHHHHHhcC----CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccccc-C
Confidence 235688999 9999998731 1579999999999999999999999999999999999999999999988 4
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC--Ch---hHHHHHHhhhhhcccCChHHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI--PP---KTVDEIYKIASIALSPNVPAQIF 316 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~--~~---~~~~~l~~~~~~~~~~~~~~q~~ 316 (463)
+.++.++..+ ..+.++|+++||||+| ++||+|+||+++++. ++ ++++.+........+++.+.|.+
T Consensus 220 ~~~~~sl~~~--------~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a 290 (433)
T PRK06855 220 GKKTVPLSEV--------IGDVPGIALKGISKEL-PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMA 290 (433)
T ss_pred CCCCCCHHHH--------cCcCCeEEEecCcccc-CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHH
Confidence 4445566655 2223579999999999 899999999996321 12 22333333332245678999999
Q ss_pred HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhH--------H---
Q 041151 317 MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAI--------E--- 385 (463)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~--------~--- 385 (463)
+..++++. .++ ++.+++++.|+++++.+.+.|++++|+.+..|+|+||+|++++ .... +
T Consensus 291 ~~~~l~~~-----~~~---~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~--~~~~~~~~~~~~~~~~ 360 (433)
T PRK06855 291 IPRIMSHP-----EYK---NYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFE--DGVLNNKQSLPIENPE 360 (433)
T ss_pred HHHhhcCC-----cHH---HHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccc--cccccccccCCcchhh
Confidence 99999743 233 3455678899999999999999888888899999999996654 2210 0
Q ss_pred --H-H---hhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 041151 386 --A-A---KRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 386 --~-~---~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~ 450 (463)
. . ...+..++.+++..+++++||.+.||+.|+.. + .++|||++ .++++|++++++|++++++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-~-~~~Rls~~~~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 361 VKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-L-NGFRVTLLERDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred hHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC-C-CceEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 0 0 00001236677888899999999999999752 3 35999999 68999999999999998753
No 11
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.1e-50 Score=410.37 Aligned_cols=360 Identities=19% Similarity=0.317 Sum_probs=300.5
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.+++++.+++.+.++.+...+. +.++|+|+.|.|+. +. |+.+.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~------------------------~~-----~~~~~~~~ 76 (413)
T PLN00175 31 QVAKRLEKFKTTIFTQMSSLAI-----KHGAINLGQGFPNF------------------------DG-----PDFVKEAA 76 (413)
T ss_pred chhHHhhcCCCCHHHHHHHHhh-----cCCeEecCCCCCCC------------------------CC-----CHHHHHHH
Confidence 3678888889988877765542 34799999999995 33 77788888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+++.. ....|++..|.++||+++++++.+++|++++++ +|++|+|+++++..++.+++ +|||+|+++
T Consensus 77 ~~~~~~---~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~ 152 (413)
T PLN00175 77 IQAIRD---GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSY 152 (413)
T ss_pred HHHHhc---CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC-CCCCEEEEeCCCchhH
Confidence 877765 347899999999999999999999999999998 79999999999999999998 999999997
Q ss_pred ------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 ------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 ------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ ..+++.+|+ +.|++.+.+ ++|+|++++||||||.++|.+++++|+++|++|+++||+
T Consensus 153 ~~~~~~~g~~~~~v~~~~~~~~~~~-~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~ 225 (413)
T PLN00175 153 EATLSMAGAKIKTVTLRPPDFAVPE-DELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFT 225 (413)
T ss_pred HHHHHHcCCEEEEEECCcccCCCCH-HHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEE
Confidence 56665 223588999 999999876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|+ + .+.++..+. ...+++|+++||||.| ++||+|+||++ +++++++.+.+... ..+++
T Consensus 226 De~Y~~l~~~-~-~~~s~~~~~-------~~~~~vi~i~SfSK~~-~~~G~RiG~~v---~~~~l~~~l~~~~~~~~~~~ 292 (413)
T PLN00175 226 DEVYDKLAFE-G-DHISMASLP-------GMYERTVTMNSLGKTF-SLTGWKIGWAI---APPHLTWGVRQAHSFLTFAT 292 (413)
T ss_pred ecccCccccC-C-cccChhhCC-------CCcCcEEEEecchhhc-cCcchheeeeE---eCHHHHHHHHHHHhhccCCC
Confidence 9999999883 3 233554431 1135899999999999 89999999999 69999999988775 56889
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..+|++. ..+.++.++.|+++++.+.+.|++. |+.+..|+|+||+|+++. +.+
T Consensus 293 s~~~Q~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~-~~~------- 353 (413)
T PLN00175 293 ATPMQWAAVAALRAP----------ESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHT-PFG------- 353 (413)
T ss_pred CHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecc-ccC-------
Confidence 999999999998632 1235568889999999999999998 888889999999997653 111
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCC--CCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQK--EGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~--~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
..++.+++..+++++||.+.||+.|+.. .+.+++||+++.+++++++++++|+++++
T Consensus 354 --~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 354 --FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 1235678888888899999999999642 34569999999888999999999998875
No 12
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-50 Score=406.05 Aligned_cols=359 Identities=19% Similarity=0.279 Sum_probs=298.5
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++....++.+..+...+.+.+..++++++|+.|.|+. +. ++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~------------------------~~-----~~~~~~~~~ 55 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDM------------------------PP-----ADFVREEMV 55 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5788888889999998888887777788899999999985 33 677777777
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+.+... ...+|+ ..|.++||++||+|+++++|+++++ ++|++|+|+++++..++.+++ ++||.|+++
T Consensus 56 ~~~~~~--~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~-~~Gd~Vlv~~P~y~~~~ 131 (399)
T PRK07681 56 HTANQK--ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA-NPGDIILVPDPGYTAYE 131 (399)
T ss_pred HHHhcc--ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEECCCCccchH
Confidence 766542 334565 4799999999999999999999998 799999999999999999998 999999997
Q ss_pred -----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ .+.+|.+|+ +.+++.+.+ ++++|++||||||||.++|.+++++|+++|++++++||+
T Consensus 132 ~~~~~~G~~~~~v~~~~~~~~~~d~-~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~ 204 (399)
T PRK07681 132 TGIQMAGATSYYMPLKKENDFLPDL-ELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVH 204 (399)
T ss_pred HHHHhcCCEEEEEecCCCCCCcCCH-HHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 66666 234578899 999998876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.| ++.+..++..+. ...+++|+++||||+| |+||+|+||++ +++++++.+.+... ..+++
T Consensus 205 De~y~~~~~-~~~~~~~~~~~~-------~~~~~~i~~~S~SK~~-~~~GlRiG~~i---~~~~l~~~~~~~~~~~~~~~ 272 (399)
T PRK07681 205 DFAYAEFYF-DGNKPISFLSVP-------GAKEVGVEINSLSKSY-SLAGSRIGYMI---GNEEIVRALTQFKSNTDYGV 272 (399)
T ss_pred eccchhhee-CCCCCCChhhCC-------CCcccEEEEeeccccc-CCccceeEEEe---cCHHHHHHHHHHHhhcccCC
Confidence 999999988 344444554431 1234789999999999 89999999999 69999999988775 56789
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.+.. .+.++.++.|+++++.+.+.|++. |+.+..|++++|+|++++ ..
T Consensus 273 s~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~--~~------- 332 (399)
T PRK07681 273 FLPIQKAACAALRNGA----------AFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIP--KG------- 332 (399)
T ss_pred CHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECC--CC-------
Confidence 9999999999986421 234456778999999999999998 888888999999997654 22
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.++.+++..+++++||.+.||..|+. .+.+++||+++.+.+++++++++|++
T Consensus 333 ---~~~~~~~~~l~~~~gv~v~pg~~f~~-~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 ---WTSLSFAYALMDRANVVVTPGHAFGP-HGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred ---CCHHHHHHHHHHhCCEEEeCChhhCc-CCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 13566777877779999999999975 34569999999777999999999987
No 13
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=4.4e-50 Score=405.17 Aligned_cols=363 Identities=19% Similarity=0.289 Sum_probs=294.5
Q ss_pred hhhhhhccchhhhhHHHHHHHH-HHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 12 NENVKKVQYAVRGELYLRASEL-QKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+.++.+++++++..+...+++. +..|+++|+|+.|+|+. +. |+.+.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~~~~ 52 (396)
T PRK09147 2 NPRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKH------------------------PT-----PAFIKDALA 52 (396)
T ss_pred cchhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 4567788899999888888877 44588999999999985 33 677788877
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCC-CCCC-cEEEcCCcHHHHHHHHHHHhcCC---CCEEEEc----
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYP-SDPE-LIFLTDGASKGVMQTLNCVIRGE---GDGVVLL---- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~~~~---gd~Vlvp---- 161 (463)
+.+. ....|++..|.++||++||+|+++++|++ ++++ +|++|+|+++++..++.+++ +| ||.|++|
T Consensus 53 ~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~P~y 127 (396)
T PRK09147 53 ANLD----GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPNPFY 127 (396)
T ss_pred HHhh----hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcCCCc
Confidence 6654 34789999999999999999999889998 8986 99999999999999999998 89 8999997
Q ss_pred ---------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe
Q 041151 162 ---------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL 226 (463)
Q Consensus 162 ---------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~ 226 (463)
.|+++ .+++|++|+ +.+++.+.+ ++|+|++||||||||.++|.+++++|+++|++|++
T Consensus 128 ~~~~~~~~~~g~~~~~vp~~~~~~~~~d~-~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~ 200 (396)
T PRK09147 128 QIYEGAALLAGAEPYFLNCDPANNFAPDF-DAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGF 200 (396)
T ss_pred cchHHHHHhcCCEEEEeccCccccCccCH-HHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCe
Confidence 56665 244688999 999988876 79999999999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h
Q 041151 227 VLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I 305 (463)
Q Consensus 227 ~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 305 (463)
+||+||+|.++.|++..+..+.......++. +..+++|+++||||.| ++||+|+||++ +++++++.+.+... .
T Consensus 201 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~-~~~GlRiG~~~---~~~~l~~~~~~~~~~~ 274 (396)
T PRK09147 201 VIASDECYSEIYFDEAAPPLGLLEAAAELGR--DDFKRLVVFHSLSKRS-NVPGLRSGFVA---GDAALLKKFLLYRTYH 274 (396)
T ss_pred EEEeeccccccccCCCCCCchhhhhccccCc--cccccEEEEecccccc-CCccceeeeec---CCHHHHHHHHHHhhhc
Confidence 9999999999988432122222221111100 2235899999999998 89999999999 68999999987775 4
Q ss_pred cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHH
Q 041151 306 ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIE 385 (463)
Q Consensus 306 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~ 385 (463)
.++++.+.|.++...+.. ..+.++.++.|+++++.+.+.|++. +.+..|+|++|+|++++ .
T Consensus 275 ~~~~~~~~q~a~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~--~---- 335 (396)
T PRK09147 275 GCAMPPAVQAASIAAWND-----------EAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVP--G---- 335 (396)
T ss_pred ccCCCHHHHHHHHHHhcc-----------hhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECC--C----
Confidence 577889999987777641 1234567888999999999999874 56678999999997664 1
Q ss_pred HHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC-----CCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 386 AAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ-----KEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 386 ~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~-----~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
++.+++..+++++||.+.||..|+. ..+.+++||+++.+++++++++++|++++.
T Consensus 336 --------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 336 --------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred --------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 2566777778889999999999864 234579999999778999999999998763
No 14
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-50 Score=404.60 Aligned_cols=373 Identities=20% Similarity=0.294 Sum_probs=301.9
Q ss_pred hhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHH
Q 041151 12 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKH 91 (463)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~ 91 (463)
+.++.+++.+++..+...+.+.+..+.++++|+.|+|+. +. |+.+++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~------------------------~~-----~~~~~~~~~~ 57 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDG------------------------PT-----PQHIIDKLCE 57 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCC------------------------CC-----CHHHHHHHHH
Confidence 456778888888888888888888888899999999995 32 6778888876
Q ss_pred HhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 92 YLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 92 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
.+.. .....|+++.|.++||+++|+|+++++|+.++++ +|++|+|+++++..++.+++ +|||.|+++
T Consensus 58 ~~~~--~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~ 134 (403)
T PRK08636 58 SAQK--PKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDPAYPIHSQ 134 (403)
T ss_pred HhcC--CccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHH
Confidence 6543 2467899999999999999999998899999998 79999999999999999998 999999996
Q ss_pred ----cCcee---c---CCCcccChHHHHHHHHHHHHhc-CCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 ----FHTTW---K---RQQIGVLIINDLQQSVAQARSK-GITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 ----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~-~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ + ++++++|+ +.+.+.+.+..+. .+++++|++|+||||||.++|.+++++|+++|++|+++||+
T Consensus 135 ~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~ 213 (403)
T PRK08636 135 AFILAGGNVHKMPLEYNEDFELDE-DQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIIS 213 (403)
T ss_pred HHHhcCCEEEEEeccccccCccCh-hhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 56666 2 34589998 8665444332211 23789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|+++.| ++.+..++..+. ...+++|+++||||+| |+||+|+||++ +++++++.+.+... ..+++
T Consensus 214 De~Y~~l~~-~~~~~~~~~~~~-------~~~~~~i~~~S~SK~~-~~~GlRiG~iv---~~~~li~~~~~~~~~~~~~~ 281 (403)
T PRK08636 214 DIAYADITF-DGYKTPSILEVE-------GAKDVAVESYTLSKSY-NMAGWRVGFVV---GNKKLVGALKKIKSWLDYGM 281 (403)
T ss_pred eccchhhcc-CCCCCCChhcCC-------CccccEEEEEeccccc-CCccceeeeee---CCHHHHHHHHHHHHHhcccC
Confidence 999999988 344444554431 1124688899999999 89999999998 69999999988775 45777
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.. ...+.+++++.|+++++.+.+.|++. |+.+..|+||+|+|++++ ..+
T Consensus 282 ~~~~q~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~--~~~------ 342 (403)
T PRK08636 282 FTPIQVAATIALDG----------DQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIP--EPA------ 342 (403)
T ss_pred ChHHHHHHHHHHhC----------cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECC--Ccc------
Confidence 88899888877631 12345568889999999999999987 788888999999997654 210
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
...++.+++..+++++||.+.||..|+.. +.+++||+++.+++++++++++|+++++++
T Consensus 343 -~~~~~~~l~~~ll~~~gV~v~pg~~f~~~-~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 343 -RHLGSLEFSKQLLTEAKVAVSPGIGFGEY-GDEYVRIALIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred -CCCCHHHHHHHHHHhCCEEEecchhhCcC-CCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 00124667777788899999999999763 456999999988899999999999998764
No 15
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=7.8e-50 Score=405.80 Aligned_cols=366 Identities=21% Similarity=0.317 Sum_probs=292.1
Q ss_pred hhhHHHHHHHHHHh--cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCC
Q 041151 23 RGELYLRASELQKE--GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGL 100 (463)
Q Consensus 23 ~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~ 100 (463)
++.+...++++... ++++|+|++|+|+.+.. .+. |+.+.+++.+++.. ...
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~--------------------~~~-----~~~~~~a~~~al~~--~~~ 87 (430)
T PLN00145 35 RAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPC--------------------FRT-----APEAEDAVAAALRS--GKY 87 (430)
T ss_pred hhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCC--------------------CCC-----CHHHHHHHHHHHHc--CcC
Confidence 33344555555433 77899999999984221 133 78888988888775 234
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee-
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW- 166 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~- 166 (463)
..|++..|.+++|+++++++.+++|.++++++|++|+|++++|.+++.++. +|||+|++| .|..+
T Consensus 88 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~-~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~ 166 (430)
T PLN00145 88 NSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA-QPGANILLPRPGYPLYEARAVFSGLEVR 166 (430)
T ss_pred CCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHcCCEEE
Confidence 689999999999999999999889999999999999999999999999998 899999997 45544
Q ss_pred -----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 167 -----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 167 -----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
+..+|.+|+ +.+++.+++ ++++|+++|||||||.+++.+++++|+++|++++++||+||+|.++.| +
T Consensus 167 ~~~~~~~~~~~~d~-~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~-~ 238 (430)
T PLN00145 167 HFDLLPERGWEVDL-EGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTF-G 238 (430)
T ss_pred EeeCCcccCCcCCH-HHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhcc-C
Confidence 345789999 999998877 899999999999999999999999999999999999999999999988 3
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHH------HHHhhhhhcccCChHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVD------EIYKIASIALSPNVPAQI 315 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~q~ 315 (463)
+.++.++..+ +...++|+++||||.| ++||||+||++..+ ++.+++ .+........+++.+.|.
T Consensus 239 ~~~~~~~~~~--------~~~~~vi~~~S~SK~~-~~pG~RlG~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 308 (430)
T PLN00145 239 SKPFVPMGVF--------GEVAPVLTLGSISKRW-VVPGWRLGWIATCD-PNGILKETKVVDSIRNYLNISTDPATFVQG 308 (430)
T ss_pred CCCccchhhh--------cccCcEEEEecccccc-CCCCeeEEEEEEec-chhhhhhhHHHHHHHHHhcccCCCCHHHHH
Confidence 4444555443 4445899999999999 89999999998521 333333 333443334467889999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHhhcCCCC
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAKRAGKVP 394 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (463)
++..+|... ...+.++.++.++++++.+.+.|++++|+.+ ..|+|++|+|++++... ..+..+
T Consensus 309 a~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~-------~~~~~~ 372 (430)
T PLN00145 309 AIPQIIANT---------KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSC-------LSGIKD 372 (430)
T ss_pred HHHHHHhcC---------HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhh-------cCCCCC
Confidence 999998631 1234556788899999999999999888876 47999999997654210 001224
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 041151 395 DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 395 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
+.+++..+++++||.+.||..|+.+ +|+||+++.+.+++++++++|++++.+++++
T Consensus 373 ~~~~~~~ll~~~gV~v~pG~~fg~~---~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 373 DMDFCCKLAKEESVVVLPGSALGMK---NWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCC---CeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 6778889999999999999999852 5999999988899999999999999888764
No 16
>PLN02187 rooty/superroot1
Probab=100.00 E-value=8.3e-50 Score=408.28 Aligned_cols=368 Identities=20% Similarity=0.306 Sum_probs=290.3
Q ss_pred hhhhhHHHHH-HHHH-HhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCC
Q 041151 21 AVRGELYLRA-SELQ-KEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSG 98 (463)
Q Consensus 21 ~~~~~~~~~~-~~~~-~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~ 98 (463)
-+++.+...+ .... +.++++|+|+.|+|+.+.. .+. |+.+.+++.+++.. +
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~--------------------~~~-----~~~~~~~~~~~~~~--~ 99 (462)
T PLN02187 47 VTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPC--------------------FRT-----CIEAEDAVVDVLRS--G 99 (462)
T ss_pred chHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCC--------------------CCC-----CHHHHHHHHHHHhC--C
Confidence 3555554333 2222 3467899999999985110 022 67888888887775 2
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCce
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTT 165 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~ 165 (463)
....|++..|.++||+++|+|+++++++.+++++|++|+|++++|..++.+++ +|||.|+++ .|++
T Consensus 100 ~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~pGd~Vlv~~P~y~~y~~~~~~~g~~ 178 (462)
T PLN02187 100 KGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA-RPNANILLPRPGFPHYDARAAYSGLE 178 (462)
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 45689999999999999999999888999999999999999999999999998 999999997 5655
Q ss_pred e------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccccccc
Q 041151 166 W------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIY 239 (463)
Q Consensus 166 ~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~ 239 (463)
+ +.++|++|+ +.|++++++ ++++|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|
T Consensus 179 ~~~~~l~~~~~~~~d~-~~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f 251 (462)
T PLN02187 179 VRKFDLLPEKEWEIDL-EGIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIF 251 (462)
T ss_pred EEEEeCccccCCccCH-HHHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence 5 246799999 999998876 789999999999999999999999999999999999999999999988
Q ss_pred CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh----HHHHHHhhhh-hcc--cCChH
Q 041151 240 QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK----TVDEIYKIAS-IAL--SPNVP 312 (463)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~~-~~~--~~~~~ 312 (463)
+ +.++.++..+ ....++|+++||||+| ++||||+||+++ .+++ +++.+..... ..+ +++.+
T Consensus 252 ~-~~~~~s~~~~--------~~~~~vi~l~SfSK~f-~~pGlRiG~~v~--~~p~~~~~~~~~~~~~~~~~~~~~~~s~~ 319 (462)
T PLN02187 252 G-DNPFVSMGKF--------ASIVPVLTLAGISKGW-VVPGWKIGWIAL--NDPEGVFETTKVLQSIKQNLDVTPDPATI 319 (462)
T ss_pred C-CCCceeHHHh--------ccCCcEEEEecchhhc-CCccceeEEEEe--cCchhHHHHHHHHHHHHHhccccCCCCHH
Confidence 3 4444455544 3334799999999999 999999999995 2332 3345555554 223 45899
Q ss_pred HHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 313 AQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 313 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
.|.++..+|++. ...+.++.++.|+++++.+.+.|++++++. +..|+|++|+|+++..+.. .+
T Consensus 320 ~Q~a~~~~L~~~---------~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~-------~~ 383 (462)
T PLN02187 320 IQAALPAILEKA---------DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLM-------DN 383 (462)
T ss_pred HHHHHHHHHhcC---------cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhC-------CC
Confidence 999999998531 123455678899999999999999986554 3478999999976642110 01
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
+.++.+++..+++++||.+.||+.|+. .+|+||+++.+++++++++++|++++++++++.
T Consensus 384 ~~~~~~~~~~ll~~~gV~v~pG~~fg~---~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~~ 443 (462)
T PLN02187 384 IKDDIDFCVKLAREENLVFLPGDALGL---KNWMRITIGVEAHMLEDALERLKGFCTRHAKKT 443 (462)
T ss_pred CCCHHHHHHHHHhhCCEEEECccccCC---CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 123567778888999999999999974 359999999888999999999999999888764
No 17
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-49 Score=401.34 Aligned_cols=371 Identities=22% Similarity=0.309 Sum_probs=308.9
Q ss_pred hhhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHH
Q 041151 9 ESMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIAR 88 (463)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a 88 (463)
..+++|+...+++.+..+...+++....+.++++|+.|.|+. +. |+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~------------------------~~-----~~~~~~~ 54 (402)
T PRK06107 4 FVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDF------------------------DT-----PDHIKQA 54 (402)
T ss_pred hhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCC------------------------CC-----CHHHHHH
Confidence 357888888888887777777887877788899999999985 33 6778888
Q ss_pred HHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 89 AKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 89 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
+.+.+.. ...+|+++.|.++||+++++++.+.+|+.+++++|++|+|+++++..++.+++ ++||.|++|
T Consensus 55 ~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~y 130 (402)
T PRK06107 55 AVAAIER---GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATL-EAGDEVIIPAPYWVSY 130 (402)
T ss_pred HHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCCCcCH
Confidence 8887764 34689999999999999999998888999999999999999999999999987 899999997
Q ss_pred ------cCcee-----c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC-CeEE
Q 041151 162 ------FHTTW-----K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE-NLVL 228 (463)
Q Consensus 162 ------~g~~~-----~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~v 228 (463)
.++.+ . ++++.+|+ +.+++.+.+ ++++|++++||||||.++|.+++++|+++|+++ +++|
T Consensus 131 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~i 203 (402)
T PRK06107 131 PDMVLANDGTPVIVACPEEQGFKLTP-EALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLV 203 (402)
T ss_pred HHHHHHcCCEEEEecCCcccCCCCCH-HHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEE
Confidence 23333 1 34577999 999998876 799999999999999999999999999999998 9999
Q ss_pred EecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcc
Q 041151 229 LGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IAL 307 (463)
Q Consensus 229 i~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~ 307 (463)
|+||+|.++.| .+.+..++..+.++. .+++|+++||||.| ++||+|+||++ +++++++.+..... ..+
T Consensus 204 I~De~y~~l~~-~~~~~~~~~~~~~~~------~~~vi~~~S~SK~~-~~pGlRiG~~~---~~~~~~~~~~~~~~~~~~ 272 (402)
T PRK06107 204 LTDDIYDHIRF-DDEPTPHLLAAAPEL------RDRVLVTNGVSKTY-AMTGWRIGYAA---GPADLIAAINKLQSQSSS 272 (402)
T ss_pred EEehhcccccc-CCCCCCCHHHhCcCc------cCCEEEEeccchhh-cCcccceeeee---cCHHHHHHHHHHHHhccc
Confidence 99999999888 344455665543322 24799999999999 89999999999 69999999998876 578
Q ss_pred cCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC------Ch
Q 041151 308 SPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL------PP 381 (463)
Q Consensus 308 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~------~~ 381 (463)
+++.+.|.++..+|.+. .++.++.++.|+++++.+.+.|++++|+.+..|+||||+|+++.. |.
T Consensus 273 ~~s~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~ 342 (402)
T PRK06107 273 CPSSISQAAAAAALNGD----------QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPE 342 (402)
T ss_pred CCChHHHHHHHHHhcCC----------hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeeccccccccccc
Confidence 89999999999998631 133456788899999999999998878898899999999977631 11
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
+. ...++.+++..+++++||.++||+.|+.. +++||+++.+.+++++++++|+++++++
T Consensus 343 ~~-------~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~---~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 343 GK-------VLETDQDVVLYLLDSAGVAVVQGTAYGLS---PYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred cc-------CCCCHHHHHHHHHHhCCEEEeCccccCCC---CeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 10 01245677888889999999999999852 4899999988899999999999988764
No 18
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-49 Score=397.35 Aligned_cols=362 Identities=22% Similarity=0.319 Sum_probs=301.6
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.++++++++.++++.++...+++.+..+.++++|+.|.|+. |. |+.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~------------------------~~-----~~~v~~a~ 54 (387)
T PRK08960 4 GYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDF------------------------TT-----AEPIVAAG 54 (387)
T ss_pred chhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCC------------------------CC-----CHHHHHHH
Confidence 45788889999999999998888888888999999999985 43 88899998
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+.+.. ....|++..|.+++|+++|+++++++|+.+++++|++|+|+++++..++.+++ +|||+|+++
T Consensus 55 ~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~ 130 (387)
T PRK08960 55 QAALAA---GHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLV-DPGKHWLLADPGYPCNR 130 (387)
T ss_pred HHHHhc---CCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhc-CCCCEEEEcCCCCcchH
Confidence 888764 33579989999999999999999999999999999999999999999999998 999999997
Q ss_pred -----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ .+.++.+|+ +.+++.+++ +++++++++||||||.+++.+++++|+++|++++++||+
T Consensus 131 ~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~ 203 (387)
T PRK08960 131 HFLRLVEGAAQLVPVGPDSRYQLTP-ALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVV 203 (387)
T ss_pred HHHHhcCCeEEEEecCcccCCCCCH-HHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 45544 233578999 999998877 789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|+ + ...++... + .++|+++||||.| |++|+|+||++ +++++++.+.++.. ...++
T Consensus 204 De~Y~~~~~~-~-~~~~~~~~--------~--~~vi~~~S~SK~~-g~~GlRiG~~~---~~~~~~~~~~~~~~~~~~~~ 267 (387)
T PRK08960 204 DEIYHGLTYG-V-DAASVLEV--------D--DDAFVLNSFSKYF-GMTGWRLGWLV---APPAAVPELEKLAQNLYISA 267 (387)
T ss_pred EccccccccC-C-CCCChhhc--------c--CCEEEEeeccccc-CCcccEEEEEE---cCHHHHHHHHHHHhhhccCC
Confidence 9999998773 2 22344322 2 3789999999999 89999999999 68999999988775 56788
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
+.+.|.++..++.+. ...+.++.++.|+++++.+.+.|+++ |+.+ ..|+|++|+|++++ ..
T Consensus 268 s~~~q~a~~~~l~~~---------~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~--~~------ 329 (387)
T PRK08960 268 STPAQHAALACFEPE---------TLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADIS--AF------ 329 (387)
T ss_pred CHHHHHHHHHHhhcC---------cHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEecc--cc------
Confidence 999999998887521 12445567889999999999999987 7664 46899999996654 10
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
..++.+++..+++++||.+.||+.|+.....+++||+++.+.+++.+++++|++++.
T Consensus 330 ---~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 330 ---GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred ---CCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 013566777778889999999999976434569999999777889999999887764
No 19
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3e-49 Score=398.19 Aligned_cols=361 Identities=19% Similarity=0.270 Sum_probs=294.5
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++.+..++.+..+...+.+....+.++|+|+.|+|+. +. ++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~~~~ 55 (389)
T PRK08068 5 PSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQ------------------------PT-----PEHIVEALQ 55 (389)
T ss_pred hhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5677888888888888888877777778899999999985 33 667788777
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+++.. .....|++..|.++||+++|+|+.+++|.+++++ +|++|+|+++++..++.+++ ++||.|++|
T Consensus 56 ~~~~~--~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~-~~gd~vlv~~P~y~~~~ 132 (389)
T PRK08068 56 EAAEN--PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM-NPGDTILVPDPGYPDYL 132 (389)
T ss_pred HHHhC--CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchH
Confidence 77664 2456899999999999999999998889999998 89999999999999999998 899999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ + +.++.+|+ +++++.+.+ ++++|++||||||||.++|.+++++|+++|++++++||+
T Consensus 133 ~~~~~~g~~~~~i~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~ 205 (389)
T PRK08068 133 SGVALARAQFETMPLIAENNFLPDY-TKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVH 205 (389)
T ss_pred HHHHhcCCEEEEeecccccCCCCCH-HHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEE
Confidence 56655 2 23678899 999998876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|+ +....++... . +...++|+++||||+| |+||+|+||++ +++++++.+.+... ...++
T Consensus 206 Deay~~~~~~-~~~~~s~~~~---~----~~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~~l~~~l~~~~~~~~~~~ 273 (389)
T PRK08068 206 DFAYGAIGFD-GQKPVSFLQT---P----GAKDVGIELYTLSKTF-NMAGWRVAFAV---GNESVIEAINLLQDHLFVSL 273 (389)
T ss_pred ehhhhhhccC-CCCCcChhhC---C----CccCCEEEEecchhcc-CCccceeEeEe---cCHHHHHHHHHHHhhccCCC
Confidence 9999998773 3233343332 1 2234789999999999 99999999999 69999999988875 34555
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.+. .++.+++++.|+++++.+.+.|+++ |+.+.+|+|++|+|++++ ..
T Consensus 274 ~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~--~~------- 333 (389)
T PRK08068 274 FGAIQDAAIEALLSD----------QSCVAELVARYESRRNAFISACREI-GWEVDAPKGSFFAWMPVP--KG------- 333 (389)
T ss_pred ChHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECC--CC-------
Confidence 666788887776421 1445568889999999999999998 888889999999996553 21
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
.++.++...+++++||.+.||..|+. .+.+++||+++.+++++.+++++|+++
T Consensus 334 ---~~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 334 ---YTSEQFADLLLEKAHVAVAPGNGFGE-HGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred ---CCHHHHHHHHHHhCCEEEecchHhCc-cCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 13566667766678999999999985 345699999997778888888887653
No 20
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.9e-49 Score=398.05 Aligned_cols=374 Identities=19% Similarity=0.301 Sum_probs=299.9
Q ss_pred hhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHH
Q 041151 12 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKH 91 (463)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~ 91 (463)
++++.+++++.+.++...+++.+..|+++|+|+.|+|+. +. |+.+++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~~~~~ 54 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDL------------------------PT-----PQHIVDKLCE 54 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCC------------------------CC-----CHHHHHHHHH
Confidence 466777888888888888887888888999999999985 33 7788888777
Q ss_pred HhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 92 YLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 92 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
.+.. .....|+++.|.++||+++|+|+++++|+.++++ +|++|+|+++++..++.+++ ++||.|+++
T Consensus 55 ~~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~ 131 (405)
T PRK09148 55 TAQD--PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT-APGDVILCPNPSYPIHAF 131 (405)
T ss_pred HHcC--cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccHH
Confidence 6643 2457899999999999999999998889989998 89999999999999999998 999999997
Q ss_pred ----cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccc
Q 041151 162 ----FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVY 234 (463)
Q Consensus 162 ----~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay 234 (463)
.|+++ +.+..+.+. +.+++.++.. .+++++|++++||||||.++|.+++++|+++|++++++||+||+|
T Consensus 132 ~~~~~g~~v~~v~~~~~~~~~-~~l~~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y 207 (405)
T PRK09148 132 GFIMAGGVIRSVPAEPDEEFF-PALERAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY 207 (405)
T ss_pred HHHhcCCEEEEEeCCCCCCCc-cCHHHHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc
Confidence 56665 222222233 4555554421 117899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHH
Q 041151 235 QQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPA 313 (463)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 313 (463)
.++.| ++.+..++..+ + ...+++|+++||||.| |+||+|+||++ +++++++.+.+.+. ..++++.+.
T Consensus 208 ~~~~~-~~~~~~s~~~~-~------~~~~~~i~~~SfSK~~-~~pGlR~G~~v---~~~~~i~~l~~~~~~~~~~~~~~~ 275 (405)
T PRK09148 208 SEIYF-DGNPPPSVLQV-P------GAKDVTVEFTSMSKTF-SMAGWRMGFAV---GNERLIAALTRVKSYLDYGAFTPI 275 (405)
T ss_pred hhhhc-CCCCCCChhhC-C------CccCcEEEEecccccc-CCcchheeeee---CCHHHHHHHHHHHHHhccCCChHH
Confidence 99888 34344455443 1 1124688999999999 99999999999 69999999988876 567888999
Q ss_pred HHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCC
Q 041151 314 QIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV 393 (463)
Q Consensus 314 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 393 (463)
|.++..+|.+. ..+.++.++.|+++++.+.+.|++. |+.+..|+|++|+|++++ ... ...
T Consensus 276 q~~~~~~L~~~----------~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~--~~~-------~~~ 335 (405)
T PRK09148 276 QVAATAALNGP----------QDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIP--EAF-------RHL 335 (405)
T ss_pred HHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECC--Ccc-------CCC
Confidence 99999998531 2334567888999999999999987 788778999999996654 210 001
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 394 PDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 394 ~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
++.+++..+++++||.+.||..|+. .+.+++||+++.+.+++.+++++|++++.++.+-.
T Consensus 336 ~~~~~~~~ll~~~gV~v~pg~~f~~-~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 336 GSLEFSKLLVEKADVAVAPGVGFGE-HGDGYVRIALVENEQRIRQAARNIKRFLSSADETL 395 (405)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2456777778889999999999975 34569999999888999999999999998876543
No 21
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.2e-49 Score=398.47 Aligned_cols=360 Identities=20% Similarity=0.294 Sum_probs=297.1
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
|+.++.+..++.+..+...+++.++.|+++++|+.|+|+. +. |+.+++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------------------~~-----~~~~~~~~~ 52 (383)
T TIGR03540 2 LADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDL------------------------PT-----PKHIVEALC 52 (383)
T ss_pred cchhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 3566777777777778888888888888999999999985 33 778888888
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+++.. .....|+++.|.++||+++++|+.+++|++++++ +|++|+|+++++..++.+++ ++||.|+++
T Consensus 53 ~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~-~~gd~vlv~~P~y~~~~ 129 (383)
T TIGR03540 53 KAAEN--PENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV-NPGDIVLVPDPGYPVYR 129 (383)
T ss_pred HHHhC--CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEEeCCCCcchH
Confidence 77654 2457899999999999999999998889988887 69999999999999999998 899999997
Q ss_pred -----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ .++++.+|+ +++++.+.+ ++++|++++||||||.+++.+++++|+++|++|+++||+
T Consensus 130 ~~~~~~G~~v~~v~~~~~~g~~~d~-~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 202 (383)
T TIGR03540 130 IGTLFAGGEPYEMPLKEENGFLPDF-DAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCH 202 (383)
T ss_pred HHHHhcCCEEEEEecCcccCCccCH-HHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEE
Confidence 56655 234577899 999998876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.| ++....++..+. ....++|+++||||.| |+||+|+||++ +++++++.+.+... ...++
T Consensus 203 De~y~~l~~-~~~~~~~~~~~~-------~~~~~~i~~~SfSK~~-g~~GlRiG~~i---~~~~l~~~~~~~~~~~~~~~ 270 (383)
T TIGR03540 203 DNAYSEITF-DGYKAPSFLEVD-------GAKDVGIEFHSLSKTY-NMTGWRIGMAV---GNADLIAGLGKVKTNVDSGV 270 (383)
T ss_pred ecchhhhcc-CCCCCcCcccCC-------CcccCEEEEEeccccc-CCccceeeEEe---CCHHHHHHHHHHHHhcccCC
Confidence 999999888 344444544331 1124789999999999 89999999998 69999999988775 45677
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.+. .++.+++++.++++++.+.+.|++. |+.+..|++++|+|++++ .+.
T Consensus 271 ~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~--~~~------ 331 (383)
T TIGR03540 271 FQAIQYAAIAALNGP----------QDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVP--EGY------ 331 (383)
T ss_pred ChHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECC--CCC------
Confidence 889999999888631 2344567888999999999999998 888889999999996653 221
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
++.+++..+++++||.+.||+.|+. .+.+++||+++.+++++.+++++|++
T Consensus 332 ----~~~~~~~~ll~~~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 332 ----TSAEFAARLLEETGVVVTPGVGFGE-YGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ----CHHHHHHHHHHHCCEEEecchhhCc-cCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 3567777778889999999999975 34569999999777888888888864
No 22
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=398.49 Aligned_cols=361 Identities=19% Similarity=0.264 Sum_probs=293.6
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.+++++.++.++....+...+++.+..|+++++|+.|+|+. +. |..+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~------------------------~~-----p~~~~~~~ 57 (394)
T PRK05942 7 TPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDG------------------------AA-----PQPVIEAA 57 (394)
T ss_pred chhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCC------------------------CC-----CHHHHHHH
Confidence 44677777777767667667777777788899999999984 32 67788887
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+.+.. .....|+++.|.++||+++|+|+++++|++++++ +|++|+|+++++..++.+++ +|||+|+++
T Consensus 58 ~~~~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~-~~gd~Vlv~~P~y~~~ 134 (394)
T PRK05942 58 IAALAD--PQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV-NPGDVVLVPSPAYPAH 134 (394)
T ss_pred HHHHhC--CCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC-CCCCEEEEcCCCCcch
Confidence 776653 2457899999999999999999998889989998 59999999999999999998 999999997
Q ss_pred ------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 162 ------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 162 ------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
.|+++ .+.+|.+|+ +++++.+.+ ++|+|+++|||||||.++|.+++++|+++|++++++||
T Consensus 135 ~~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI 207 (394)
T PRK05942 135 FRGPLIAGAQIYPIILKPENDWLIDL-SSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLV 207 (394)
T ss_pred HHHHHHcCCEEEEeecCCccCCccCH-HHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEE
Confidence 56665 234578999 999998876 89999999999999999999999999999999999999
Q ss_pred ecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hccc
Q 041151 230 GDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALS 308 (463)
Q Consensus 230 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~ 308 (463)
+||+|.++.+ ++....++..+. ...+++|+++||||.| |+||+|+||++ +++++++.+.+... ..++
T Consensus 208 ~De~y~~~~~-~~~~~~~~~~~~-------~~~~~~i~~~SfSK~~-~~~GlRiG~i~---~~~~l~~~l~~~~~~~~~~ 275 (394)
T PRK05942 208 HDLCYAELAF-DGYQPTSLLEIP-------GAKDIGVEFHTLSKTY-NMAGWRVGFVV---GNRHIIQGLRTLKTNLDYG 275 (394)
T ss_pred Eeccchhhcc-CCCCCCChhhCC-------CccccEEEEecchhcc-CChhhheeeee---cCHHHHHHHHHHHhhcccC
Confidence 9999999887 343344544431 1123679999999999 89999999999 68999999988775 4677
Q ss_pred CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHh
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
++.+.|.++..+++. ..++.++.++.|+++++.+.+.|++. |+.+..|+|++|+|++++ ..
T Consensus 276 ~~~~~q~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~--~~------ 336 (394)
T PRK05942 276 IFSALQKAAETALQL----------PDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCP--VG------ 336 (394)
T ss_pred CCHHHHHHHHHHHhC----------cHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECC--CC------
Confidence 888999999988852 12334567888999999999999887 888888999999996654 21
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.++.+++..+++++||.+.||+.|+. .+.+++||+++.+.+.+.+++++|++
T Consensus 337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~-~~~~~iRis~~~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 337 ----MGSTDFALNVLQKTGVVVTPGNAFGE-GGEGYVRISLIADCDRLGEALDRLKQ 388 (394)
T ss_pred ----CCHHHHHHHHHHHCCEEEeCChhhCc-CCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 12456667788899999999999975 34569999999666777777777654
No 23
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=397.66 Aligned_cols=359 Identities=20% Similarity=0.290 Sum_probs=298.2
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++....++....+...+++.+..+.++++|+.|+|+. +. |+.+.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~ 54 (385)
T PRK09276 4 LADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDL------------------------PT-----PDHIIEAMC 54 (385)
T ss_pred hhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5788888889988888888888888888999999999885 33 677888887
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+++.. .....|+++.|.++||+++++|+++++|.+++++ +|++|+|+++++..++.+++ +|||.|+++
T Consensus 55 ~~~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~-~~gd~Vl~~~P~y~~~~ 131 (385)
T PRK09276 55 KAVED--PENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV-NPGDVVLVPDPGYPVYK 131 (385)
T ss_pred HHHhC--CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcChH
Confidence 77764 2457899999999999999999998889888887 59999999999999999998 999999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + +.++.+|+ +++++.+.+ ++++|+++|||||||.+++.+++++|+++|++++++||+
T Consensus 132 ~~~~~~g~~~~~v~~~~~~g~~~d~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 204 (385)
T PRK09276 132 IGTIFAGGEPYFMPLKEENGFLPDL-DAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCH 204 (385)
T ss_pred HHHHHcCCEEEEEecCCCCCCcCCH-HHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 56655 2 33577899 999888776 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCC-CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hccc
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSK-EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALS 308 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~ 308 (463)
||+|.++.| ++....++..+ +. .+++|+++||||.| |+||+|+||++ +++++++.+.+... ...+
T Consensus 205 De~y~~~~~-~~~~~~~~~~~--------~~~~~~~i~~~S~SK~~-g~~GlRiG~~i---~~~~l~~~~~~~~~~~~~~ 271 (385)
T PRK09276 205 DAAYSEIAY-DGYKPPSFLEV--------PGAKDVGIEFHSLSKTY-NMTGWRIGFAV---GNADLIAGLGKVKSNVDSG 271 (385)
T ss_pred ecchhheec-CCCCCCChhcc--------CCCcCCEEEEecchhhc-CCcchhheeee---CCHHHHHHHHHHHhhccCC
Confidence 999999887 34444455443 22 34789999999999 99999999999 69999999988775 4556
Q ss_pred CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHh
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
++.+.|.++..++.+ ...+.+++++.++++++.+.+.|++. |+.+..|+|++|+|++++ ..
T Consensus 272 ~~~~~q~~~~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~--~~------ 332 (385)
T PRK09276 272 VFQAIQEAGIAALNG----------PQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVP--KG------ 332 (385)
T ss_pred CCHHHHHHHHHHHcC----------cHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECC--CC------
Confidence 778899999888852 12345567888999999999999998 888888999999996653 22
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.++.+++..+++++||.+.||..|+. .+.+++||+++.+++++.+++++|++
T Consensus 333 ----~~~~~l~~~ll~~~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 ----YTSAEFATLLLDKAGVVVTPGNGFGE-YGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ----CCHHHHHHHHHHhCCEEECCchhhCC-CCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 13566777777889999999999975 34569999999777888888888864
No 24
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-49 Score=396.47 Aligned_cols=358 Identities=21% Similarity=0.322 Sum_probs=293.1
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.+++++.......++.+..... ...+++||+.|+|+. +. ++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~------------------------~~-----~~~~~~~~ 51 (384)
T PRK06348 5 FLAKKYQQMEVNIMAEIATLAK----KFPDIIDLSLGDPDL------------------------IT-----DESIINAA 51 (384)
T ss_pred HHHHHHhcCCccHHHHHHHHHH----hcCCcEEcCCCCCCC------------------------CC-----CHHHHHHH
Confidence 4677787777777777766543 234689999999985 33 66777776
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+.... ....|+++.|.++||+++++|+.+++|+.+++++|++|+|+++++..++.+++ ++||+|+++
T Consensus 52 ~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~ 127 (384)
T PRK06348 52 FEDAKK---GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSIL-DPGDEVIIHEPYFTPYK 127 (384)
T ss_pred HHHHhc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchH
Confidence 665543 45789999999999999999999889999999999999999999999999998 999999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + .+++.+|+ +.|++.+++ ++++|++++||||||.++|.+++++|+++|++++++||+
T Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~ 200 (384)
T PRK06348 128 DQIEMVGGKPIILETYEEDGFQINV-KKLEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIIS 200 (384)
T ss_pred HHHHHcCCEEEEecCCcCcCCcCCH-HHHHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEE
Confidence 45554 2 34677999 999998876 789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|+ + ...++..+. ...+++|+++||||++ |+||+|+||++ +++++++.+.++.. ..+++
T Consensus 201 De~y~~~~~~-~-~~~~~~~~~-------~~~~~vi~~~SfSK~~-~l~GlRiG~~v---~~~~~~~~~~~~~~~~~~~~ 267 (384)
T PRK06348 201 DEVYDGFSFY-E-DFVPMATLA-------GMPERTITFGSFSKDF-AMTGWRIGYVI---APDYIIETAKIINEGICFSA 267 (384)
T ss_pred ecccccceeC-C-CccchhhcC-------CCcCcEEEEecchhcc-CCccccceeee---cCHHHHHHHHHHHHhccCCC
Confidence 9999999883 3 233443331 1134899999999999 99999999999 58899999988775 46788
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.. ..++.+++++.|+++++.+.+.|+.++++.+..|+|+||+|++++.+ +
T Consensus 268 ~~~~q~~~~~~l~~----------~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~-~------- 329 (384)
T PRK06348 268 PTISQRAAIYALKH----------RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKT-G------- 329 (384)
T ss_pred CHHHHHHHHHHHhC----------cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccC-C-------
Confidence 99999999988852 12334567888999999999999988788888999999999665421 1
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
.++.+++..+++++||.+.||+.|+. .+.+++||+++.+.+++++++++|+++
T Consensus 330 ---~~~~~l~~~l~~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 330 ---LSSVEFCEKLLKEAHVLVIPGKAFGE-SGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ---CCHHHHHHHHHHhCCEEEcCchhhcc-CCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 13566777777889999999999975 356799999998889999999998754
No 25
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-48 Score=395.43 Aligned_cols=343 Identities=17% Similarity=0.264 Sum_probs=280.9
Q ss_pred cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHH
Q 041151 37 GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEV 116 (463)
Q Consensus 37 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 116 (463)
++++++|+.|+|+. .+. |+.+.+++.+++.. ....+|++..|.++||++|
T Consensus 38 ~~~~i~l~~g~~~~-----------------------~~p-----~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR~ai 87 (405)
T PRK06207 38 PGRPVDFSHGDVDA-----------------------HEP-----TPGAFELFSAGVER--GGVQAYTEYRGDADIRELL 87 (405)
T ss_pred CCCceecCCcCCCC-----------------------CCC-----CHHHHHHHHHHHhc--CCCccCCCCCCCHHHHHHH
Confidence 35689999999983 122 67888888887765 2456899999999999999
Q ss_pred HHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c------CCCccc
Q 041151 117 AEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K------RQQIGV 173 (463)
Q Consensus 117 a~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~------~~~~~~ 173 (463)
++++.+.+|+++++ ++|++|+|+++++..++.+++ ++||.|+++ .|.++ + ..++++
T Consensus 88 a~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 166 (405)
T PRK06207 88 AARLAAFTGAPVDAADELIITPGTQGALFLAVAATV-ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGL 166 (405)
T ss_pred HHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCc
Confidence 99999988998898 899999999999999999998 999999996 56665 2 136889
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHH
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLM 253 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 253 (463)
|+ +.|++++++ ++++|++++||||||.+++.+++++|+++|++++++||+||+|.++.|+ +.++.++..+.
T Consensus 167 d~-~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~- 237 (405)
T PRK06207 167 DL-DQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD-GTSYTHLRALP- 237 (405)
T ss_pred CH-HHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCCchhcCC-
Confidence 99 999999887 7999999999999999999999999999999999999999999999883 33444443321
Q ss_pred hcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHH
Q 041151 254 DMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYE 332 (463)
Q Consensus 254 ~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 332 (463)
...+++|+++||||+| ++||+|+||++ +++++++++.+... ...+.+.+.|.++..++++..
T Consensus 238 ------~~~~~vi~i~SfSK~~-~lpGlRiG~ii---~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~------- 300 (405)
T PRK06207 238 ------IDPENVITIMGPSKTE-SLSGYRLGVAF---GSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD------- 300 (405)
T ss_pred ------CCcCcEEEEecchhhc-cCcccceEEEE---cCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH-------
Confidence 1235899999999999 99999999998 68999999988876 566778899999999986311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC
Q 041151 333 QFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP 412 (463)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p 412 (463)
.+.++..+.++++++.+.+.|++++|+.+..|+|++|+|++++ .. ..++.+++..+++++||.+.|
T Consensus 301 ---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~--~~---------~~~~~~~~~~l~~~~gV~v~p 366 (405)
T PRK06207 301 ---GWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLP--RL---------AVSLHDFVKILRLQAGVIVTP 366 (405)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCc--cc---------CCCHHHHHHHHHHhcCEEEeC
Confidence 1223345567888999999998887888888999999997654 21 013456676766789999999
Q ss_pred CCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 413 GSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 413 g~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
|+.|+.. +.+++|||++.+.+++++++++|++++++++
T Consensus 367 G~~F~~~-~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 367 GTEFSPH-TADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred chHhCCC-CCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 9999753 4569999999878999999999999987654
No 26
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.5e-48 Score=393.51 Aligned_cols=360 Identities=20% Similarity=0.343 Sum_probs=289.9
Q ss_pred hhhhhccchhhhhHHHHHHHHH-HhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHH
Q 041151 13 ENVKKVQYAVRGELYLRASELQ-KEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKH 91 (463)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~ 91 (463)
.++...+.+.++.+...+.+.. ..|+++++|+.|+|+. +. |+.+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~a~~~ 52 (393)
T TIGR03538 2 PNLSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKH------------------------PT-----PAFVLEALRE 52 (393)
T ss_pred chhhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCC------------------------CC-----CHHHHHHHHH
Confidence 4566777888888888887765 3678999999999985 33 7778888877
Q ss_pred HhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCC--CCCC-cEEEcCCcHHHHHHHHHHHhcCCCCE--EEEc-----
Q 041151 92 YLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYP--SDPE-LIFLTDGASKGVMQTLNCVIRGEGDG--VVLL----- 161 (463)
Q Consensus 92 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~--~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~--Vlvp----- 161 (463)
.+. ....|+++.|.++||+++|+|+++++|++ ++++ +|++|+|+++++..++.+++ +|||. |++|
T Consensus 53 ~~~----~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~-~~gd~~~vlv~~P~y~ 127 (393)
T TIGR03538 53 NLH----GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI-NPGQAPLVVMPNPFYQ 127 (393)
T ss_pred Hhh----ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc-CCCCcceEEecCCCCc
Confidence 654 34789999999999999999999988886 7885 89999999999999999998 89986 8886
Q ss_pred --------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeE
Q 041151 162 --------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLV 227 (463)
Q Consensus 162 --------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ 227 (463)
.|+++ .++++.+|+ +++++.+.+ ++|+|+++|||||||.++|.+++++|+++|++|+++
T Consensus 128 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ 200 (393)
T TIGR03538 128 IYEGAALLAGAEPYFLNCTAENGFLPDF-DAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFI 200 (393)
T ss_pred chHHHHHhcCCeEEEeeccccCCCCCCH-HHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEE
Confidence 46665 244588999 999998876 799999999999999999999999999999999999
Q ss_pred EEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hc
Q 041151 228 LLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IA 306 (463)
Q Consensus 228 vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~ 306 (463)
||+||+|.++.+++..+..+........+. +..+++|+++||||.| ++||+|+||++ +++++++.+.++.. ..
T Consensus 201 ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vi~i~S~SK~~-~~~GlRvG~~i---~~~~l~~~~~~~~~~~~ 274 (393)
T TIGR03538 201 IASDECYSELYFDEGNPPAGLLQAAAQLGR--DDFRRCLVFHSLSKRS-NLPGLRSGFVA---GDAEILKAFLRYRTYHG 274 (393)
T ss_pred EEECcchhhcccCCCCCCcCHHHhcccccc--cccccEEEEecchhhc-CCcccceEEEe---cCHHHHHHHHHHHHhhc
Confidence 999999999887322233333222222200 1345899999999998 89999999999 68999999988775 45
Q ss_pred ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHH
Q 041151 307 LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEA 386 (463)
Q Consensus 307 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~ 386 (463)
++++.+.|.++...+.. .++.++.++.|+++++.+.+.|++. +.+..|+|++|+|++++ .
T Consensus 275 ~~~~~~~q~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~--~----- 334 (393)
T TIGR03538 275 CAMPIPTQLASIAAWND-----------EQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKVP--G----- 334 (393)
T ss_pred cCcCHHHHHHHHHHhcC-----------hHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECC--C-----
Confidence 67889999998777641 2334567888999999999999874 45678999999997654 1
Q ss_pred HhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC-----CCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 387 AKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ-----KEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 387 ~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~-----~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
++.+++..+++++||.+.||+.|+. .++.+++|||++.+++++++++++|+++
T Consensus 335 -------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 335 -------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred -------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 2456677777889999999999863 2345799999997789999999999875
No 27
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.3e-48 Score=395.44 Aligned_cols=354 Identities=22% Similarity=0.344 Sum_probs=285.3
Q ss_pred HHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHH
Q 041151 34 QKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVR 113 (463)
Q Consensus 34 ~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr 113 (463)
+..|+++|+|++|+|+... ..+. |+.+.+++.+++.. ....+|++..|.++||
T Consensus 27 ~~~~~~~i~l~~G~p~~~~--------------------~~~~-----~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~lr 79 (409)
T PLN02656 27 EENGKRVISLGMGDPTAYS--------------------CFHT-----THVAQEAVVDALQS--NKFNGYAPTVGLPQAR 79 (409)
T ss_pred cccCCeeeecCCCCCCcCC--------------------CCCC-----CHHHHHHHHHHHhc--CCCCCCCCCCCCHHHH
Confidence 3467889999999998300 0133 78888888887775 2457899999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee------cCCCcccC
Q 041151 114 KEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW------KRQQIGVL 174 (463)
Q Consensus 114 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~------~~~~~~~d 174 (463)
+++++|+++.+|+.+++++|++|+|+++++..++.+++ ++||+|+++ .|+++ ..+++.+|
T Consensus 80 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d 158 (409)
T PLN02656 80 RAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA-RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVD 158 (409)
T ss_pred HHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh-CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCC
Confidence 99999999888999999999999999999999999998 999999997 45555 23468899
Q ss_pred hHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHh
Q 041151 175 IINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMD 254 (463)
Q Consensus 175 ~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 254 (463)
+ +.+++.+++ ++++|++++||||||.++|.+++++|+++|++++++||+||+|.++.| ++....++..+
T Consensus 159 ~-~~l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~--- 227 (409)
T PLN02656 159 L-DAVEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAF-GSNPFVPMGVF--- 227 (409)
T ss_pred H-HHHHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhccc-CCCCcccHHHh---
Confidence 9 999998876 789999999999999999999999999999999999999999999988 34344454443
Q ss_pred cCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC-----ChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCc
Q 041151 255 MGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 255 ~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
+...++|+++||||+| ++||+|+||++.++. ++++++++.+......+++.+.|.++..++++..
T Consensus 228 -----~~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~---- 297 (409)
T PLN02656 228 -----GSIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD---- 297 (409)
T ss_pred -----cccCcEEEEcccchhc-cCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc----
Confidence 3345799999999999 899999999995210 3578888887765345678999999999986311
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCe
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGI 408 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI 408 (463)
..+.++.++.++++++.+.+.|++++++. +..|+|++|+|++++.+.. .+..++.+++..+++++||
T Consensus 298 -----~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~-------~~~~~~~~~~~~~l~~~gV 365 (409)
T PLN02656 298 -----ESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLL-------EDISDDIDFCFKLAREESV 365 (409)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhc-------CCCCCHHHHHHHHHHhCCE
Confidence 23345578889999999999999886554 3578999999977642100 0011345667788899999
Q ss_pred EeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 409 STVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 409 ~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.+.||+.|+. .+++||+++.+++++++++++|++++.++.
T Consensus 366 ~v~pg~~fg~---~~~iRi~~~~~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 366 IILPGTAVGL---KNWLRITFAADPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred EEecchhcCC---CCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999974 348999999888999999999999887654
No 28
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.8e-48 Score=392.93 Aligned_cols=375 Identities=26% Similarity=0.425 Sum_probs=295.1
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
..|+++.+++++.+.++...+++.+..|+++++|+.|+|+.++. |. |+.+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~---------------------~~-----~~~i~~~~ 58 (404)
T PRK09265 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGF---------------------EA-----PDEILRDV 58 (404)
T ss_pred chhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCC---------------------CC-----CHHHHHHH
Confidence 34566778888988888888888888888999999999974221 33 77888888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+.+.. ...|+++.|.++||+++|+++..+++..+++++|++|+|+++++..++.+++ ++||+|+++
T Consensus 59 ~~~~~~----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~ 133 (404)
T PRK09265 59 IRNLPT----AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALL-NNGDEVLVPAPDYPLWT 133 (404)
T ss_pred HHHhhc----CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCCcChH
Confidence 776543 3689999999999999999997655447899999999999999999999997 899999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ + ..++.+|+ +.+++.+++ ++++|+++|||||||.+++.+++++|+++|+++|++||+
T Consensus 134 ~~~~~~g~~~v~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 206 (404)
T PRK09265 134 AAVSLSGGKPVHYLCDEEAGWFPDL-DDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFA 206 (404)
T ss_pred HHHHHcCCEEEEEecccccCCCCCH-HHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEE
Confidence 45444 1 23577899 999998876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh----HHHHHHhhhhhc
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK----TVDEIYKIASIA 306 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~~~~ 306 (463)
||+|.++.| ++....++..+ +.+.++|+++||||+| |+||+|+||++++ ++++ +++.+.......
T Consensus 207 De~y~~~~~-~~~~~~~~~~~--------~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~-~~~~~~~~~~~~~~~~~~~~ 275 (404)
T PRK09265 207 DEIYDKILY-DGAVHISIASL--------APDLLCVTFNGLSKAY-RVAGFRVGWMVLS-GPKKHAKGYIEGLDMLASMR 275 (404)
T ss_pred ehhhhhccC-CCCCcCCHHHc--------CCCceEEEEecchhhc-cCcccceEEEEEe-CchHHHHHHHHHHHHHhccc
Confidence 999999888 34444555543 3334799999999999 8999999999952 1443 344443333335
Q ss_pred ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHH
Q 041151 307 LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEA 386 (463)
Q Consensus 307 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~ 386 (463)
++++.+.|.++..+|... ..+..+. +.++.+.++++.+.+.|++++|+.+..|+|++|+|++++....
T Consensus 276 ~~~~~~~q~~~~~~l~~~----~~~~~~~----~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~---- 343 (404)
T PRK09265 276 LCANVPAQHAIQTALGGY----QSINELI----LPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVY---- 343 (404)
T ss_pred cCCCcHHHHHHHHHhcCc----hhHHHHH----HHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEeccccc----
Confidence 678999999999998532 1111121 1234577889999999998888998999999999976642110
Q ss_pred HhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 387 AKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 387 ~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
+..++.+++.+++.++||.+.||+.|+.. +.+++||+++.+++++++++++|+++++++
T Consensus 344 ----~~~~~~~~~~~~l~~~gv~v~pg~~F~~~-~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 344 ----PIHDDEQFVLDLLLQEKVLLVQGTGFNWP-EPDHFRIVTLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred ----CCCCHHHHHHHHHHhCCEEEECchhhCCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 11235566778899999999999999752 456999999988899999999999988754
No 29
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-48 Score=393.82 Aligned_cols=352 Identities=20% Similarity=0.300 Sum_probs=275.9
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
.++++|+|+.|+|+.++. .+. |+.+.+++.+++.. ....+|++..|.++||++
T Consensus 30 ~~~~~i~l~~G~p~~~~~--------------------~~~-----p~~~~~a~~~~~~~--~~~~~Y~~~~G~~~lr~a 82 (409)
T PLN00143 30 DHRLAISFGFGDPSCFEC--------------------FRT-----TNIAEDAIVEAVRS--AKFNSYAPTGGILPARRA 82 (409)
T ss_pred CCCceeeCCCCCCCCCCC--------------------CCC-----CHHHHHHHHHHHhC--cCCCCCCCCCCCHHHHHH
Confidence 577899999999982111 133 88888888888775 245679999999999999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee------cCCCcccChH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW------KRQQIGVLII 176 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~------~~~~~~~d~~ 176 (463)
+|+|+.+++|+++++++|++|+|+++++..++.+++ ++||.|+++ .|.++ ..++|.+|+
T Consensus 83 ia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~- 160 (409)
T PLN00143 83 IADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDL- 160 (409)
T ss_pred HHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCH-
Confidence 999999999999999999999999999999999998 999999997 45555 235688999
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.|++++++ ++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.| ++.+..++..+
T Consensus 161 ~~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~~~~~~~----- 228 (409)
T PLN00143 161 DAVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVF-GSKPFVPMGLF----- 228 (409)
T ss_pred HHHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccccccc-CCCCCcchhhh-----
Confidence 999988866 789999999999999999999999999999999999999999999988 33333444333
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH------HHHHhhhhhcccCChHHHHHHHHhcCCCCCCCch
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV------DEIYKIASIALSPNVPAQIFMGLMVNPLKPGDIS 330 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~------~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 330 (463)
+...++|+++||||.| ++||+|+||++.++ ++.++ +.+.+.......++.+.|.++..+|.+.
T Consensus 229 ---~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~------ 297 (409)
T PLN00143 229 ---ASIVPVITLGSISKRW-MIPGWGLGWLVTCD-PSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKT------ 297 (409)
T ss_pred ---cccCcEEEEccchhhc-CCCccceEEEEeeC-chhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcC------
Confidence 3345799999999999 89999999999411 23333 3333333323345889999999888521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeE
Q 041151 331 YEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGIS 409 (463)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~ 409 (463)
...+.++.++.++++++.+.+.|+++++..+ ..|+|++|+|++++ ... ..+..++.+++..+++++||.
T Consensus 298 ---~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~--~~~-----~~~~~~~~~~~~~ll~~~gV~ 367 (409)
T PLN00143 298 ---TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN--LLL-----LEDIEDDMEFCLKLAKEESLI 367 (409)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc--hhh-----cCCCCCHHHHHHHHHHhCCEE
Confidence 1223445677788888889999988755443 46899999997664 100 001123567777888999999
Q ss_pred eeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 410 TVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 410 v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+.||..|+. .+++||+++.+.+++++++++|+++++++.+
T Consensus 368 v~pg~~f~~---~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 368 ILPGVTVGL---KNWLRITFAVEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred EeCccccCC---CCeEEEEEcCCHHHHHHHHHHHHHHHHHhcc
Confidence 999999974 3589999998789999999999999876654
No 30
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.1e-48 Score=389.90 Aligned_cols=364 Identities=21% Similarity=0.328 Sum_probs=299.5
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++.+.+++.++.+...+.+.+..+.++++|+.|.|+. +. |+.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~ 53 (388)
T PRK07337 3 LAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDF------------------------TA-----PEPVVEAAA 53 (388)
T ss_pred hhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCC------------------------CC-----CHHHHHHHH
Confidence 5778888888999999988888887788899999999985 33 677888887
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
+.+.. ....|++..|.++||+++|+|+++++|+.+++++|++|+|+++++..++.+++ ++||+|+++
T Consensus 54 ~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~ 129 (388)
T PRK07337 54 RALRR---GVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV-ERGDEVLMPDPSYPCNRH 129 (388)
T ss_pred HHHhc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHH
Confidence 77664 35679999999999999999999889999999999999999999999999998 999999997
Q ss_pred ----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|+++ + ...+++|+ +.+++.+.+ ++++|++++||||||.+++.+++++|+++|++++++||+|
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D 202 (388)
T PRK07337 130 FVAAAEGRPVLVPSGPAERFQLTA-ADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVD 202 (388)
T ss_pred HHHHcCCEEEEeecCCccCCcCCH-HHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 45555 2 34678999 999998876 7899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|.++.|. +. ..++..+ + +++|+++||||.| |+||+|+||++ +++++++.+.+... ...+++
T Consensus 203 e~y~~~~~~-~~-~~~~~~~--------~--~~vi~~~S~SK~~-~~~G~RiG~~~---~~~~l~~~l~~~~~~~~~~~s 266 (388)
T PRK07337 203 EIYQGLSYD-AA-PVSALSL--------G--DDVITINSFSKYF-NMTGWRLGWLV---VPEALVGTFEKLAQNLFICAS 266 (388)
T ss_pred ccccccccC-CC-CcChhhc--------c--CCEEEEEechhhc-CCchhheeeee---cCHHHHHHHHHHHHHhccCCC
Confidence 999998773 32 2333221 2 3689999999999 89999999999 58889999988875 456789
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHhh
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
.+.|.++..++.+. .+ .+.++.++.|+++++.+.+.|+++ |+.+ ..|+|++|+|++++-...
T Consensus 267 ~~~q~~~~~~l~~~-----~~----~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~------- 329 (388)
T PRK07337 267 ALAQHAALACFEPD-----TL----AIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAH------- 329 (388)
T ss_pred hHHHHHHHHHhccC-----ch----HHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccC-------
Confidence 99999998888532 11 223456888999999999999987 7664 478999999977642100
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
.+..++.+++..+++++||.+.||+.|+...+.+++||+++.+++++++++++|++++
T Consensus 330 ~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 330 PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 0012356777788889999999999998644567999999977899999999998764
No 31
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-48 Score=389.75 Aligned_cols=363 Identities=19% Similarity=0.280 Sum_probs=293.1
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
++++++.+++++.+..+....+ ..++++|+.|.|+. +. |+.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~p~~------------------------~~-----p~~~~~~~ 48 (387)
T PRK08912 3 MGNPVFADLPTTIFEVMSQLAR-----EHGAINLGQGFPDD------------------------PG-----PEDVRRAA 48 (387)
T ss_pred hhhHHHhhCCCCHHHHHHHHHh-----hCCeEEccCCCCCC------------------------CC-----CHHHHHHH
Confidence 4577888888887666554432 24689999999985 33 77788887
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+.+.. ...+|+++.|.++||+++++++.+.+|+.++++ +|++|+|+++++..++.+++ ++||+|+++
T Consensus 49 ~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vlv~~p~y~~~ 124 (387)
T PRK08912 49 ADALLD---GSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALV-EPGDEVVLFQPLYDAY 124 (387)
T ss_pred HHHHhc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhh
Confidence 776654 346899999999999999999998889999998 99999999999999999998 899999997
Q ss_pred ------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 ------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 ------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ ...++++|+ +.+++.+.+ ++++|++++||||||.++|.+++++|+++|++++++||+
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~ 197 (387)
T PRK08912 125 LPLIRRAGGVPRLVRLEPPHWRLPR-AALAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAIC 197 (387)
T ss_pred HHHHHHcCCEEEEEecCcccCcCCH-HHHHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEE
Confidence 56665 234688999 999998876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.|+ +....++..+ + ...+++|+++||||.| |++|+|+||++ +++++++.+.+... ..++.
T Consensus 198 De~y~~~~~~-~~~~~~~~~~-~------~~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~~~~~~l~~~~~~~~~~~ 265 (387)
T PRK08912 198 DEVWEHVVFD-GRRHIPLMTL-P------GMRERTVKIGSAGKIF-SLTGWKVGFVC---AAPPLLRVLAKAHQFLTFTT 265 (387)
T ss_pred hhhhhhcccC-CCCCcChhhC-C------CccCceEEEeechhhc-cCcCceeEEEe---cCHHHHHHHHHHHhhccccC
Confidence 9999998883 3334444332 1 1134799999999999 99999999999 58999999987765 45677
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+...|.++..++... ..+.+++++.++++++.+.+.|+.. |+.+.+|+|+||+|+++.....
T Consensus 266 ~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~------- 327 (387)
T PRK08912 266 PPNLQAAVAYGLGKP----------DDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGL------- 327 (387)
T ss_pred ChHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCC-------
Confidence 778888888877421 2233467888999999999999998 8888899999999966542000
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCC-CCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQ-KEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
..++.+++..+++++||.+.||..|+. .++.+++||+++.+++++++++++|++++++
T Consensus 328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 013566777777889999999999964 2345799999997789999999999987753
No 32
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=8e-48 Score=388.96 Aligned_cols=369 Identities=25% Similarity=0.414 Sum_probs=295.6
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
++.++.+++ +.++++...+.+.+.+|+++|+|+.|.|... +.+. |+.+.+++.
T Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~---------------------~~~p-----~~~~~~~~~ 56 (398)
T PRK08363 4 ASERAMGVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKF---------------------DFQP-----PEHMKEAYC 56 (398)
T ss_pred hhHHHHhcc-HHHHHHHHHHHHHHhcCCCeEEEeCCCCCcC---------------------CCCC-----CHHHHHHHH
Confidence 567777776 4567777777777778889999999999510 0122 778888888
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
+.+.. ....|++..|.++||+++++|+++.+|+.+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 57 ~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~ 132 (398)
T PRK08363 57 RAIKE---GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILIPGPSYPPYTG 132 (398)
T ss_pred HHHHc---CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCCcchHH
Confidence 77765 23579989999999999999999989999999999999999999999999997 999999996
Q ss_pred ----cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ----FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ----~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|+++ ..+++.+|+ +.+++.+.+ ++++|++++||||||.+++.+++++|+++|++++++||+|
T Consensus 133 ~~~~~g~~~v~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~D 205 (398)
T PRK08363 133 LVKFYGGVPVEYRTIEEEGWQPDI-DDIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISD 205 (398)
T ss_pred HHHHcCCEEEEeccccccCCcCCH-HHHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEh
Confidence 45544 234567899 999998876 7899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh----hcc
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS----IAL 307 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~----~~~ 307 (463)
|+|.++.|. + ...++..+ +...++|+++||||+| ++||+|+||+++. +++++++.+.+... ..+
T Consensus 206 eay~~~~~~-~-~~~~~~~~--------~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~-~~~~~~~~l~~~~~~~~~~~~ 273 (398)
T PRK08363 206 EIYDLMTYE-G-KHVSPGSL--------TKDVPVIVMNGLSKVY-FATGWRLGYIYFV-DPEGKLAEVREAIDKLARIRL 273 (398)
T ss_pred hhhhhhccC-C-cccCHHHc--------CcCCcEEEEecchhcc-CCccceEEEEEEe-CcHHHHHHHHHHHHHHhcccc
Confidence 999998773 3 23344433 3344799999999998 8999999999841 15666666654432 246
Q ss_pred cCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHH
Q 041151 308 SPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAA 387 (463)
Q Consensus 308 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~ 387 (463)
+++.+.|.++..+|.+. .+++++.++.++++++.+.+.|+++||+.+..|+|+||+|++++. ..
T Consensus 274 ~~s~~~q~~~~~~l~~~----------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~--~~---- 337 (398)
T PRK08363 274 CPNTPAQFAAIAGLTGP----------MDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEE--GP---- 337 (398)
T ss_pred cCChHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEecc--CC----
Confidence 78999999999888521 233445778899999999999998888888889999999965541 10
Q ss_pred hhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 388 KRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 388 ~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
..++.+++..+|+++||.+.||+.|+. .+.+|+|||++.+++++++++++|++++.+.
T Consensus 338 ----~~~~~~~~~~~l~~~gV~v~~g~~f~~-~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 338 ----WKDDKEFVLDVLHEAHVLFVHGSGFGE-YGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred ----CCCHHHHHHHHHHhCCEEEeCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 013556677888999999999999975 3556999999977899999999999988763
No 33
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4e-48 Score=388.69 Aligned_cols=337 Identities=24% Similarity=0.418 Sum_probs=279.4
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
+++|+|+.|+|+. +. ++.+.+++.+.+.. ...+|++..|.++||+++|
T Consensus 20 ~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia 67 (378)
T PRK07682 20 EGVISLGVGEPDF------------------------VT-----PWNVREASIRSLEQ---GYTSYTANAGLLELRQEIA 67 (378)
T ss_pred CCeEEeCCCCCCC------------------------CC-----CHHHHHHHHHHHhc---CCCCCCCCCCcHHHHHHHH
Confidence 4689999999985 32 56677777776654 3567999999999999999
Q ss_pred HHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c---CCCcccChHH
Q 041151 118 EFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K---RQQIGVLIIN 177 (463)
Q Consensus 118 ~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~---~~~~~~d~~~ 177 (463)
+|+++++|+.++++ +|++|+|+++++..++.+++ +|||+|+++ .|+++ + .+++++|+ +
T Consensus 68 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~-~ 145 (378)
T PRK07682 68 KYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII-NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQP-A 145 (378)
T ss_pred HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCH-H
Confidence 99999889988886 89999999999999999998 999999997 45554 2 34688999 9
Q ss_pred HHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCC
Q 041151 178 DLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGL 257 (463)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 257 (463)
+|++++.+ ++++|++++||||||.++|.+++++|+++|++|+++||+||+|.++.|+ + .+.++..+.
T Consensus 146 ~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~-~~~~~~~~~----- 212 (378)
T PRK07682 146 QIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYD-E-AYTSFASIK----- 212 (378)
T ss_pred HHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccC-C-CCCChhhcc-----
Confidence 99998876 7999999999999999999999999999999999999999999999883 2 233443331
Q ss_pred CCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHH
Q 041151 258 PFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVR 336 (463)
Q Consensus 258 ~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 336 (463)
+...++|+++||||+| |+||+|+||++ +++++++.+.+... ..++++.+.|.++..+|++.. .
T Consensus 213 --~~~~~~i~~~S~SK~~-~~~GlR~G~~~---~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~----------~ 276 (378)
T PRK07682 213 --GMRERTILISGFSKGF-AMTGWRLGFIA---APVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN----------D 276 (378)
T ss_pred --cccCCEEEEecCcccc-cChhhhhhhhh---cCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh----------H
Confidence 1124799999999999 89999999999 69999999987765 456788999999999986421 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCC
Q 041151 337 ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f 416 (463)
+.+++++.|+++++++.+.|+++ |+.+..|+|+||+|+.+... + .++.+++..+++++||.+.||..|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~-~----------~~~~~~~~~ll~~~gv~v~pg~~f 344 (378)
T PRK07682 277 DVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISST-G----------LSSEEFAEQLLLEEKVAVVPGSVF 344 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCC-C----------CCHHHHHHHHHHhCCEEEcCchhh
Confidence 24567888999999999999998 88888999999999765311 1 135667777777889999999999
Q ss_pred CCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 417 GQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 417 ~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
+. .+.+++|||++.+.+++++++++|+++++++
T Consensus 345 ~~-~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 345 GE-SGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred Cc-CCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 75 3457999999987899999999999988654
No 34
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-47 Score=390.76 Aligned_cols=330 Identities=21% Similarity=0.343 Sum_probs=281.8
Q ss_pred CCcHHHHHHHHH-HhhhcCCC-CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 80 VFPADAIARAKH-YLSLTSGG-LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 80 ~~p~~~~~a~~~-~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
+||...++.+.. .+...... ...|.++.|.++||++|++++...+|+.+++++|++|+|+++++.+++..++ +|||+
T Consensus 103 ~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~-~pGd~ 181 (459)
T COG1167 103 LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL-DPGDT 181 (459)
T ss_pred cCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC-CCCCE
Confidence 468777777754 44433233 6789999999999999999998889999999999999999999999999998 89999
Q ss_pred EEEc-------------cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHH
Q 041151 158 VVLL-------------FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 158 Vlvp-------------~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~ 220 (463)
|+++ +|.++ +.+..++|+ +.|++.++.. ++|++|++ +.+||||.++|.++.++|+++
T Consensus 182 v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~-e~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~l 255 (459)
T COG1167 182 VLVEDPTYPGALQALEALGARVIPVPVDEDGIDP-EALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLAL 255 (459)
T ss_pred EEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCH-HHHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHH
Confidence 9996 67777 778999999 9999999975 79999988 889999999999999999999
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
|++||++||+||+|+++.| ++.+..++..+ +..++||+++||||+++ ||+|+||++ +++++++.+.
T Consensus 256 A~~~~~~IIEDD~y~el~~-~~~p~~~l~~l--------d~~~rViy~gSFSK~l~--PglRlG~vv---~p~~~~~~~~ 321 (459)
T COG1167 256 AEKYDVLIIEDDYYGELRY-DGPPPPPLKAL--------DAPGRVIYLGSFSKTLA--PGLRLGYVV---APPELIEKLL 321 (459)
T ss_pred HHHcCCeEEeeCcchhhhc-CCCCCCChHhh--------CCCCCEEEEeeehhhcc--cccceeeee---CCHHHHHHHH
Confidence 9999999999999999999 45555566665 66679999999999995 999999999 6999999999
Q ss_pred hhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C-CcccccCCceeEEeeec
Q 041151 301 KIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-R-NVVCNFTEGAMYSFPQI 377 (463)
Q Consensus 301 ~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-p-g~~~~~~~g~~~~~~~~ 377 (463)
..+. ...+++.+.|.+++..+.+ +. +.++.++++..|+++++.+.+.|.+. | ++.+..|.||||+|+.
T Consensus 322 ~~k~~~~~~~s~~~Q~~la~~l~~-----G~---~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~- 392 (459)
T COG1167 322 RLKQAADLGPSSLSQAALAAFLLS-----GH---YDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLE- 392 (459)
T ss_pred HHHHHhcCCCChHHHHHHHHHHHc-----CC---HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEE-
Confidence 8886 7899999999999999874 33 44556678999999999999999985 4 6888999999999954
Q ss_pred cCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCCCCCCC-CCcEEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 041151 378 RLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSGFGQKE-GIFHLRTTIL-PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~f~~~~-~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~ 451 (463)
+|.++ ++.. +...+.++||.+.| |..|.... ..+++|++++ .+++++++++++|.+++.+..
T Consensus 393 -l~~~~----------~~~~-l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 393 -LPEGI----------DARE-LLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred -cCCCC----------CHHH-HHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44432 2344 45566778999999 88887643 4568999999 889999999999999988764
No 35
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.8e-47 Score=386.71 Aligned_cols=363 Identities=19% Similarity=0.288 Sum_probs=288.2
Q ss_pred chhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCC
Q 041151 20 YAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGG 99 (463)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~ 99 (463)
..+++.+...+++.+..++++++|+.|+|+..+ +.+. ++.+.+++.+.+.. ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~--------------------~~~~-----~~~~~~~~~~~~~~--~~ 65 (401)
T TIGR01264 13 VNPIRAIVDNMKVKPNPEKPMIKLSIGDPTVFG--------------------NLPT-----DPEVMQAMKDSLDS--GK 65 (401)
T ss_pred hhHHHHHHHHHHhhhhcCCCeeecCCCCCCCcC--------------------CCCC-----CHHHHHHHHHHHhc--cC
Confidence 444777887888777777889999999996200 0122 77888888777665 24
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW 166 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~ 166 (463)
...|++..|.++||+++++++++ ++..+++++|++|+|+++++..++.+++ ++||+|+++ .|.++
T Consensus 66 ~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y~~~~~~~~~~g~~v 143 (401)
T TIGR01264 66 YNGYAPTVGALSAREAIASYYHN-PDGPIEADDVVLCSGCSHAIEMCIAALA-NAGQNILVPRPGFPLYETLAESMGIEV 143 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhh-cCCCCCHHHEEECcChHHHHHHHHHHhC-CCCCEEEEeCCCChhHHHHHHHcCCEE
Confidence 56799999999999999999976 4667899999999999999999999998 899999997 56665
Q ss_pred ------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 167 ------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 167 ------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
.+.++++|+ +.+++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+||+|.++.|
T Consensus 144 ~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~- 215 (401)
T TIGR01264 144 KLYNLLPDKSWEIDL-KQLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVF- 215 (401)
T ss_pred EEeecCCccCCCCCH-HHHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhcc-
Confidence 233688999 999998876 789999999999999999999999999999999999999999999988
Q ss_pred CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh---hHHHHHHhhhhhcccCChHHHHHH
Q 041151 241 DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP---KTVDEIYKIASIALSPNVPAQIFM 317 (463)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~q~~~ 317 (463)
++....++..+ +...++|+++||||+| ++||+|+||++.++... ++++.+.++....++++.+.|.++
T Consensus 216 ~~~~~~~~~~~--------~~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~ 286 (401)
T TIGR01264 216 SGATFEPLASL--------SSTVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGAL 286 (401)
T ss_pred CCcccccHHHc--------CCCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHH
Confidence 33344455444 3334699999999999 89999999999521001 344555554433467889999999
Q ss_pred HHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC---ChhhHHHHhhcCCCC
Q 041151 318 GLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL---PPKAIEAAKRAGKVP 394 (463)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 394 (463)
..+|.+. ...++++.++.++++++.+.+.|+++||+.+..|+||+|+|++++. |. ..+
T Consensus 287 ~~~l~~~---------~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~----------~~~ 347 (401)
T TIGR01264 287 PSILLRT---------PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPE----------FKN 347 (401)
T ss_pred HHHHHhC---------cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCC----------CCC
Confidence 9988521 1234556788899999999999999878888889999999977642 21 113
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 395 DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 395 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
+.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|+++++++
T Consensus 348 ~~~~~~~l~~~~gI~v~pg~~f~~---~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 348 DVEFTERLVAEQSVFCLPGSCFEY---PGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHHhCCEEEeCchhcCC---CCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 566777777889999999999974 24899999977899999999999988654
No 36
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-47 Score=388.75 Aligned_cols=352 Identities=20% Similarity=0.313 Sum_probs=280.4
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
.++++|+|+.|.|+. ++. ... |+.+.+++.+.+.. ....+|+++.|.++||++
T Consensus 31 ~~~~~i~l~~g~p~~-----------------~~~---~~p-----~~~~~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~a 83 (412)
T PTZ00433 31 SPKSIIKLSVGDPTL-----------------DGN---LLT-----PAIQTKALVEAVDS--QECNGYPPTVGSPEAREA 83 (412)
T ss_pred CCCCeeecCCcCCCC-----------------cCC---CCC-----CHHHHHHHHHHhhc--CCCCCCCCCCCcHHHHHH
Confidence 678899999999983 000 011 67778877776664 245789999999999999
Q ss_pred HHHHHHHhc------CCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee------cCCC
Q 041151 116 VAEFIERRD------GYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW------KRQQ 170 (463)
Q Consensus 116 ia~~~~~~~------g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~------~~~~ 170 (463)
||+|+++++ |..+++++|++|+|+++++..++.+++ ++||+|+++ .|+++ .+.+
T Consensus 84 ia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~ 162 (412)
T PTZ00433 84 VATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC-DEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKD 162 (412)
T ss_pred HHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCcccHHHHHHHcCCEEEEEecCcccc
Confidence 999998765 467899999999999999999999998 899999997 56665 2346
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
+++|+ +.|++.+++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|+ +....++..
T Consensus 163 ~~~d~-~~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~ 234 (412)
T PTZ00433 163 WEADL-DEIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFN-GATFTSVAD 234 (412)
T ss_pred CcCCH-HHHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccC-CCCccchhh
Confidence 79999 999998876 7999999999999999999999999999999999999999999998883 333345544
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC---CChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCC
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN---IPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPG 327 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 327 (463)
+ +...++|+++||||.| |+||+|+||+++.+ .++++++.+.+.....++++.+.|.++..++.+.
T Consensus 235 ~--------~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--- 302 (412)
T PTZ00433 235 F--------DTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT--- 302 (412)
T ss_pred c--------cCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC---
Confidence 3 3333689999999999 89999999999511 0245777777765534688999999999888531
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcC
Q 041151 328 DISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATG 407 (463)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 407 (463)
. ..++++.++.++++++.+.+.|++..|+.+..|+|++|+|++++... + .+..++.+++..+++++|
T Consensus 303 ---~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~-~------~~~~~~~~~~~~ll~~~g 369 (412)
T PTZ00433 303 ---P---QEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEK-F------RDIKSDVEFYEKLLEEEN 369 (412)
T ss_pred ---c---HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhh-c------CCCCCHHHHHHHHHHhcC
Confidence 1 23455678889999999999999866888889999999997654210 0 001135677777777899
Q ss_pred eEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 408 ISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 408 I~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
|.+.||+.|+. .+++||+++..++++++++++|++++++++
T Consensus 370 V~v~pg~~f~~---~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 370 VQVLPGEIFHM---PGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred EEEeCccccCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999975 248999999778899999999999987665
No 37
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-47 Score=384.70 Aligned_cols=362 Identities=21% Similarity=0.327 Sum_probs=295.6
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.|+.++.+.....++++.... +...++|+|+.|+|+. +. ++.+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~ 55 (391)
T PRK08361 9 FIAGRINLIQRSKIRELFERA----SKMENVISLGIGEPDF------------------------DT-----PKNIKEAA 55 (391)
T ss_pred chhHHHHhCCccHHHHHHHHH----HhhcCeEEcCCCCCCC------------------------CC-----CHHHHHHH
Confidence 568888888888777765543 2235689999999985 33 67788887
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+++.. ....|++..|.++||+++|+++++.+|..+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 56 ~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~g~~Vlv~~p~y~~~~ 131 (391)
T PRK08361 56 KRALDE---GWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL-EEGDEVIIPDPAFVCYV 131 (391)
T ss_pred HHHHhc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccH
Confidence 777664 34679888999999999999998888988999999999999999999999997 899999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + +.++.+|+ +.+++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+
T Consensus 132 ~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 204 (391)
T PRK08361 132 EDAKIAEAKPIRIPLREENEFQPDP-DELLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILS 204 (391)
T ss_pred HHHHHcCCEEEEEecCCccCCCCCH-HHHHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEE
Confidence 55555 2 23577999 999999887 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|.++.| ++....++... + ..++|+++||||+| |++|+|+||++ +++++++.+.+... ..+++
T Consensus 205 De~y~~~~~-~~~~~~~~~~~--------~-~~~~i~~~s~SK~~-~~~GlRiG~~~---~~~~~~~~~~~~~~~~~~~~ 270 (391)
T PRK08361 205 DEPYEHFLY-EGAKHYPMIKY--------A-PDNTILANSFSKTF-AMTGWRLGFVI---APEQVIKDMIKLHAYIIGNV 270 (391)
T ss_pred Eccccccee-CCCCCCCHhhc--------C-CCCEEEEecCchhc-CCcHhhhhhhc---cCHHHHHHHHHHHhhhccCC
Confidence 999999887 33333444332 2 23789999999999 99999999999 58899998887765 45788
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.+.. +. .+.++.++.++++++.+.+.|++++|+.+..|+|++|+|++++. .+
T Consensus 271 ~~~~q~~~~~~l~~~~-----~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~-~~------- 334 (391)
T PRK08361 271 ASFVQIAGIEALRSKE-----SW---KAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDE-TG------- 334 (391)
T ss_pred ChHHHHHHHHHhcCCc-----cc---HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCC-CC-------
Confidence 8999999999986432 21 23456788899999999999999888999999999999966641 11
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
.++.++...+++++||.+.||..|+. .+.+++||+++.+++++++++++|++++++
T Consensus 335 ---~~~~~l~~~l~~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 335 ---MSSEDFAEWLLEKARVVVIPGTAFGK-AGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred ---CCHHHHHHHHHHhCCEEEcCchhhCC-CCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 13556666667788999999999975 345799999997778999999999988864
No 38
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-47 Score=359.12 Aligned_cols=339 Identities=19% Similarity=0.288 Sum_probs=295.0
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
++++.|.+.+.|+ +. |+.+++++.+.+.. ...+|+ .+..++-++|+
T Consensus 25 ~DvlPmWVADMDf------------------------~~-----pp~i~~Al~~rvdh---GvfGY~--~~~~~~~~ai~ 70 (388)
T COG1168 25 EDVLPMWVADMDF------------------------PT-----PPEIIEALRERVDH---GVFGYP--YGSDELYAAIA 70 (388)
T ss_pred CCcceeeeecccC------------------------CC-----CHHHHHHHHHHHhc---CCCCCC--CCCHHHHHHHH
Confidence 6788888888886 55 99999999999887 667887 56788999999
Q ss_pred HHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee-------cCCCcccChHH
Q 041151 118 EFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW-------KRQQIGVLIIN 177 (463)
Q Consensus 118 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~-------~~~~~~~d~~~ 177 (463)
+|..++|++.+.++.|++++|...++..++++|. +|||.|++. .|.++ .+..+.+|+ +
T Consensus 71 ~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~-~ 148 (388)
T COG1168 71 HWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDF-D 148 (388)
T ss_pred HHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecH-H
Confidence 9999999999999999999999999999999998 999999995 66666 455688899 9
Q ss_pred HHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCC
Q 041151 178 DLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGL 257 (463)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 257 (463)
.||+.+.+. ++|++++||||||||.+|+.++|.+|.++|++||+.||+||+|+++.+ .+..+.++..+.+.+
T Consensus 149 ~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~-~g~~h~~~a~ls~~~-- 220 (388)
T COG1168 149 ALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVL-GGHKHIPFASLSERF-- 220 (388)
T ss_pred HHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccc-cCCCccchhhcChhh--
Confidence 999999984 689999999999999999999999999999999999999999999999 456777777775554
Q ss_pred CCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh--hcccCChHHHHHHHHhcCCCCCCCchHHHHH
Q 041151 258 PFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS--IALSPNVPAQIFMGLMVNPLKPGDISYEQFV 335 (463)
Q Consensus 258 ~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 335 (463)
. +++|++.|.||+| +++|+.++++++ .+++++.++.+... ...++|.++..|..++++ +-.
T Consensus 221 --a--~~~it~~saSKtF-NlaGL~~a~~Ii--~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~----------~G~ 283 (388)
T COG1168 221 --A--DNSITLTSASKTF-NLAGLKCAYIII--SNRELRAKFLKRLKRNGLHGPSALGIIATEAAYN----------QGE 283 (388)
T ss_pred --h--cceEEEeeccccc-cchhhhheeEEe--cCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH----------hch
Confidence 2 4799999999999 999999999999 78888777765543 456788888888888765 445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC
Q 041151 336 RESKGILESLRRRARMMTDGFNS-CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~L~~-~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~ 414 (463)
.|++++.+.++.|++++.+.|++ +|++++..|+|.|.+|+|++-.. . ++.+....++++.+|.+.+|.
T Consensus 284 ~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~----------l-~d~~l~~~ll~~akVal~~G~ 352 (388)
T COG1168 284 PWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG----------L-DDSELAEFLLEEAKVALSPGS 352 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC----------C-ChHHHHHHHHHhhcEeccCCC
Confidence 77888999999999999999987 69999999999999999986321 1 245667788999999999999
Q ss_pred CCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 415 GFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 415 ~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
.||. .|++++|++++++.+.+++++++|+..+++
T Consensus 353 ~FG~-~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 353 TFGE-EGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred ccCc-CCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 9998 578899999999999999999999988765
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-47 Score=383.81 Aligned_cols=358 Identities=22% Similarity=0.320 Sum_probs=292.5
Q ss_pred hhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHH
Q 041151 13 ENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHY 92 (463)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~ 92 (463)
+++.+.+.+.++.+...+. ..+++++|+.|+|+. |. |+.+.+++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~------------------------~~-----~~~~~~~~~~~ 49 (382)
T PRK06108 3 PAARALPESGIREVANAGR----GREGVLPLWFGESDL------------------------PT-----PDFIRDAAAAA 49 (382)
T ss_pred hhhhhCCchHHHHHHHHHh----ccCCeEEecCCCCCC------------------------CC-----CHHHHHHHHHH
Confidence 4556677777777655443 234689999999986 44 78888888887
Q ss_pred hhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------
Q 041151 93 LSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL----------- 161 (463)
Q Consensus 93 ~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp----------- 161 (463)
+.+ ....|+++.|.++||+++++++.+.+|+.+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 50 ~~~---~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~ 125 (382)
T PRK06108 50 LAD---GETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV-GPGDEVVAVTPLWPNLVAAP 125 (382)
T ss_pred Hhc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHH
Confidence 765 33569999999999999999999888988999999999999999999999998 899999996
Q ss_pred --cCcee---c----CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 162 --FHTTW---K----RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 162 --~g~~~---~----~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
.|+++ + ..+|.+|+ +.|++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+||
T Consensus 126 ~~~g~~~~~v~~~~~~~~~~~d~-~~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De 198 (382)
T PRK06108 126 KILGARVVCVPLDFGGGGWTLDL-DRLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADE 198 (382)
T ss_pred HHCCCEEEEeeCCCCCCCccCCH-HHHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeh
Confidence 56665 2 23567999 999998876 79999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCCh
Q 041151 233 VYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNV 311 (463)
Q Consensus 233 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~ 311 (463)
+|.++.++.+....++..+. +..+++|+++||||.| |++|+|+||++ +++++++.+.+... ...+++.
T Consensus 199 ~y~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~S~SK~~-g~~G~RiG~~~---~~~~~~~~~~~~~~~~~~~~~~ 267 (382)
T PRK06108 199 VYERLYYAPGGRAPSFLDIA-------EPDDRIIFVNSFSKNW-AMTGWRLGWLV---APPALGQVLEKLIEYNTSCVAQ 267 (382)
T ss_pred hhhhhccCCCCCCCCHhhcC-------CCcCCEEEEeechhhc-cCcccceeeee---CCHHHHHHHHHHHHhcccCCCh
Confidence 99999883133333443331 2234799999999999 89999999999 68999999987765 4567899
Q ss_pred HHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 312 PAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 312 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
+.|.++..+|... ..+.++++++++++++.+.+.|++++|+.+..|+|++|+|++++ ..
T Consensus 268 ~~q~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~--~~--------- 326 (382)
T PRK06108 268 FVQRAAVAALDEG----------EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIP--GV--------- 326 (382)
T ss_pred HHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC--CC---------
Confidence 9999999888532 12344677889999999999999888899999999999996654 21
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.++.+++..+++++||.+.||+.|+. .+.+++|||++.+++++++++++|+++++
T Consensus 327 -~~~~~~~~~ll~~~gV~v~pg~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 -TDSLALAKRLVDEAGLGLAPGTAFGP-GGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred -CCHHHHHHHHHHhCCEEEeCchhhCC-CCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 13556777778889999999999974 34579999999888999999999998774
No 40
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-47 Score=383.60 Aligned_cols=335 Identities=20% Similarity=0.310 Sum_probs=276.3
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
..+++|+|+.|.|+. +. ++.+.+++.+.+.. ....|+++.|.++||++
T Consensus 27 ~~~~~i~l~~g~p~~------------------------~~-----~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ 74 (384)
T PRK12414 27 AQHDALNLSQGAPNF------------------------AP-----DPALVEGVARAMRD---GHNQYAPMAGIAALREA 74 (384)
T ss_pred HhCCeEEcCCCCCCC------------------------CC-----CHHHHHHHHHHHHh---CCCCcCCCCCcHHHHHH
Confidence 345799999999985 33 77788888776654 34689999999999999
Q ss_pred HHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c--CCCcccChH
Q 041151 116 VAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K--RQQIGVLII 176 (463)
Q Consensus 116 ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~--~~~~~~d~~ 176 (463)
+++++.+++|+++++ ++|++|+|+++++..++.+++ +|||+|+++ .|+++ + .+++.+|+
T Consensus 75 ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~- 152 (384)
T PRK12414 75 LAEKTERLYGARYDPASEVTVIASASEGLYAAISALV-HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNW- 152 (384)
T ss_pred HHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCH-
Confidence 999999888988776 589999999999999999998 999999997 56655 2 24678999
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.|++.+++ ++++|++++||||||.++|.+++++|+++|++++++||+||+|.++.|+ +.+..++..+ +
T Consensus 153 ~~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~-~~~~~~~~~~-~--- 221 (384)
T PRK12414 153 DEVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFD-GARHHSMARH-R--- 221 (384)
T ss_pred HHHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCC-CCCccCcccC-c---
Confidence 999998876 7999999999999999999999999999999999999999999998883 3333344332 1
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFV 335 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 335 (463)
...+++|+++||||.| |+||+|+||++ +++++++.+.+... ..++++.+.|.++..+|.+.. +.
T Consensus 222 ---~~~~~~i~~~SfSK~~-~~pGlRiG~~v---~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~--------~~ 286 (384)
T PRK12414 222 ---ELAERSVIVSSFGKSY-HVTGWRVGYCL---APAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA--------SY 286 (384)
T ss_pred ---CccCcEEEEecccccc-cCccceEEEEe---cCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh--------HH
Confidence 1134799999999999 89999999999 68999999988875 567889999999999986421 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC-ChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC
Q 041151 336 RESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL-PPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~ 414 (463)
.++++.|+++++.+.+.|++. |+.+.+|+|+||+|++++- +. .++.+++..+++++||.+.||+
T Consensus 287 ---~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gV~v~pg~ 351 (384)
T PRK12414 287 ---LGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD-----------ESDSDFVLRLIRDARVATIPLS 351 (384)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC-----------CCHHHHHHHHHHhCCEEEecch
Confidence 135778999999999999998 8888899999999976641 11 1256777788899999999999
Q ss_pred CCCCCC-CCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 415 GFGQKE-GIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 415 ~f~~~~-~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.|+... +.+++||+++.+++++++++++|++
T Consensus 352 ~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 352 AFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred hhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 997432 2469999999888999999999874
No 41
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-47 Score=384.34 Aligned_cols=370 Identities=24% Similarity=0.407 Sum_probs=307.1
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
++|+++++.+++++.++...+.+....+.++++|+.|+|+. +. ++.+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------------------~~-----~~~~~~~~ 53 (393)
T PRK05764 3 KLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDF------------------------DT-----PEHIKEAA 53 (393)
T ss_pred chhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCC------------------------CC-----CHHHHHHH
Confidence 47999999999999999999888887788899999999985 33 67788888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+.+.+ ....|++..|...||+++++++.+.+|..+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 54 ~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~y~~~~ 129 (393)
T PRK05764 54 IEALDD---GKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL-DPGDEVIIPAPYWVSYP 129 (393)
T ss_pred HHHHhc---CCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc-CCCCEEEecCCCCcchH
Confidence 877765 34569999999999999999999888888899999999999999999999997 899999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + +.++.+|+ +.+++.+++ ++++|++++||||||.++|.+++++|+++|++|++++|+
T Consensus 130 ~~~~~~g~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 202 (393)
T PRK05764 130 EMVKLAGGVPVFVPTGEENGFKLTV-EQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLS 202 (393)
T ss_pred HHHHHcCCEEEEEecCcccCCcCCH-HHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEE
Confidence 56655 2 34678999 999998876 789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|..+.| ++....++..+.. +..+++|+++||||.+ |++|+|+||++ +++++++.+..... ...++
T Consensus 203 De~y~~~~~-~~~~~~~~~~~~~------~~~~~~i~~~s~SK~~-~~~G~RiG~i~---~~~~~~~~~~~~~~~~~~~~ 271 (393)
T PRK05764 203 DEIYEKLVY-DGAEFTSIASLSP------ELRDRTITVNGFSKAY-AMTGWRLGYAA---GPKELIKAMSKLQSHSTSNP 271 (393)
T ss_pred eccccceee-CCCCcccHHHcCC------CCcCCEEEEecCcccc-cCccceeEEEe---cCHHHHHHHHHHHhhcccCC
Confidence 999999887 3333345444322 2234799999999999 99999999999 69999999988775 56788
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.. . ..+.+++++.++++++.+.+.|++++|+.+..|+|++|+|+++..... .
T Consensus 272 ~~~~q~~~~~~l~~-------~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~------~ 335 (393)
T PRK05764 272 TSIAQYAAVAALNG-------P---QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLG------K 335 (393)
T ss_pred ChHHHHHHHHHHcC-------C---hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccc------c
Confidence 99999999988852 1 133456788899999999999999889999999999999976642110 0
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+ .++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++
T Consensus 336 ~~-~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 336 SI-TDSLEFAEALLEEAGVAVVPGIAFGA---PGYVRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred cc-CCHHHHHHHHHHhCCEEEccccccCC---CCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 00 02466677778889999999999975 35899999988899999999999988754
No 42
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-47 Score=381.52 Aligned_cols=365 Identities=21% Similarity=0.307 Sum_probs=294.7
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.|++++..++++.+..+...++ ...++++|+.|.|+. +. |+.+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~g~~~~------------------------~~-----~~~~~~a~ 49 (389)
T PRK05957 3 QFTSRMDAVQSPIIPVVGQLIR----ENPGTISLGQGVVSY------------------------PP-----PPEAIEAL 49 (389)
T ss_pred hhhHHHHhcCCcHHHHHHHHHH----hCCCeEEccCCCCCC------------------------CC-----CHHHHHHH
Confidence 3578887888877765443332 335689999999885 33 78888888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+.+.. .....|++..|.+++|+++++++.+++|+.++ +++|++|+|+++++..++.+++ ++||.|+++
T Consensus 50 ~~~~~~--~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~ 126 (389)
T PRK05957 50 NNFLAN--PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT-DPGDEIILNTPYYFNH 126 (389)
T ss_pred HHHHhC--CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcCH
Confidence 877654 24468999999999999999999988898877 6799999999999999999997 899999996
Q ss_pred ------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|+++ .+.++++|+ +.+++.+++ ++|+|++++||||||.+++.+++++|+++|+++|++||+|
T Consensus 127 ~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~D 199 (389)
T PRK05957 127 EMAITMAGCQPILVPTDDNYQLQP-EAIEQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISD 199 (389)
T ss_pred HHHHHhcCCEEEEeecCCCCCcCH-HHHHHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEe
Confidence 56665 344678999 999999876 7999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|.++.|+ +.+..+...+. +...++|+++||||.| |++|+|+||++ .++++++++.+... ...+++
T Consensus 200 e~y~~~~~~-~~~~~~~~~~~-------~~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~~~~~~~~~~~~~~~~~~~ 267 (389)
T PRK05957 200 EAYEYFTYD-GVKHFSPGSIP-------GSGNHTISLYSLSKAY-GFASWRIGYMV---IPIHLLEAIKKIQDTILICPP 267 (389)
T ss_pred ccchhccCC-CCCccChhhCC-------CccCcEEEEecchhhc-cCccceeEEEe---cCHHHHHHHHHHHhhcccCCC
Confidence 999999883 33333333221 3335899999999999 99999999999 58999999988775 456788
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-ccccCCceeEEeeeccCChhhHHHHhh
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV-VCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
.+.|.++..++.+.. .++++.++.++++++.+.+.|++++++ .+.+|+|++|+|+++. .+
T Consensus 268 ~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~--~~------- 328 (389)
T PRK05957 268 VVSQYAALGALQVGK----------SYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVN--TD------- 328 (389)
T ss_pred cHHHHHHHHHHhCCh----------HHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCC--CC-------
Confidence 899999988886321 122334566899999999999988774 7788999999996654 22
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.++.+++..+++++||.+.||+.|+.. +.+++||+++ .+.+++++++++|.+.++++.+
T Consensus 329 ---~~~~~~~~~l~~~~gv~v~pg~~f~~~-~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 329 ---LNDFELVKQLIREYRVAVIPGTTFGMK-NGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred ---CChHHHHHHHHHHCCEEEccchhhCCC-CCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 135677777777899999999999753 3569999998 7889999999999999887654
No 43
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=7.4e-47 Score=380.77 Aligned_cols=364 Identities=19% Similarity=0.310 Sum_probs=293.9
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.|++++.....+.++++..... ...++|+|+.|.|+. +. |+.+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~ 52 (391)
T PRK07309 6 RFNKQLDKIEVSLIRQFDQSIS----DIPGILKLTLGEPDF------------------------TT-----PDHVKEAA 52 (391)
T ss_pred HHHhhhhhcCccHHHHHHHHHH----hcCCeEEcCCCCCCC------------------------CC-----CHHHHHHH
Confidence 4578888888887777665432 235699999999985 32 66777777
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+++.. ....|++..|.++||+++++++.+.+|+.+++ ++|++|+|+++++..++.+++ ++||.|+++
T Consensus 53 ~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~~ 128 (391)
T PRK07309 53 KRAIDA---NQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAIL-EPGDKVLLPAPAYPGY 128 (391)
T ss_pred HHHHhc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcch
Confidence 777664 33579999999999999999999889988775 699999999999999999997 899999997
Q ss_pred ------cCcee---c--CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 ------FHTTW---K--RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 ------~g~~~---~--~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + ..++.+|+ +.++++++.. ..++++|++++||||||.+++.+++++|+++|++|+++||+
T Consensus 129 ~~~~~~~g~~~~~~~~~~~~~~~d~-~~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~ 204 (391)
T PRK07309 129 EPIVNLVGAEIVEIDTTENDFVLTP-EMLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVIS 204 (391)
T ss_pred HHHHHHcCCEEEEEecCCcCCcCCH-HHHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 56655 2 33577999 9999988642 11589999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSP 309 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~ 309 (463)
||+|+++.| ++.+..++..+ .. +++|+++||||.| |+||+|+||++ +++++++.+.+... ...++
T Consensus 205 D~~y~~~~~-~~~~~~~~~~~--------~~-~~~i~~~S~SK~~-g~~GlRvG~~v---~~~~~~~~~~~~~~~~~~~~ 270 (391)
T PRK07309 205 DEVYSELTY-TGEPHVSIAEY--------LP-DQTILINGLSKSH-AMTGWRIGLIF---APAEFTAQLIKSHQYLVTAA 270 (391)
T ss_pred Eccccceee-CCCCCCCHHHh--------cc-CCEEEEecChhhc-cCccceeEEEE---eCHHHHHHHHHHHhhcccCC
Confidence 999999988 34444455443 22 3799999999999 99999999999 68999999987764 45678
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+.|.++..++.+.. + +....++.|+++++.+.+.|++. |+.+..|+|++|+|+++ |.+.
T Consensus 271 ~~~~q~~~~~~l~~~~-----~-----~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l--~~~~------ 331 (391)
T PRK07309 271 TTMAQFAAVEALTNGK-----D-----DALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKI--PAGY------ 331 (391)
T ss_pred ChHHHHHHHHHHhCCh-----h-----HHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEEC--CCCC------
Confidence 9999999999986421 1 12346778899999999999988 88889999999999654 3221
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
..++.+++..+++++||.+.||+.|+.. +.+++||+++.+.+++++++++|+++++++
T Consensus 332 --~~~~~~~~~~l~~~~gv~v~pg~~f~~~-~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 332 --NQDSFKFLQDFARKKAVAFIPGAAFGPY-GEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchhhCCC-CCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 0134566667788899999999999763 567999999977789999999999998765
No 44
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.1e-47 Score=380.37 Aligned_cols=360 Identities=22% Similarity=0.340 Sum_probs=295.1
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
|++++...+.+.+.++...+. ..+++++|+.|.|+. |. ++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~~~p~~------------------------~~-----~~~~~~a~~ 51 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMVQ----NYDNLISLTIGQPDF------------------------PT-----PSHVKEAAK 51 (387)
T ss_pred hhHHHHhCCccHHHHHHHHHH----hcCCeEEecCCCCCC------------------------CC-----CHHHHHHHH
Confidence 478888888888877766542 335689999999885 33 677888888
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+.+.. ....|++..|.++||+++++++++.+|+.++++ +|++|+|+++++..++.+++ ++||.|++|
T Consensus 52 ~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~ 127 (387)
T PRK07683 52 RAITE---NYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTIL-EPGTEVILPAPIYPGYE 127 (387)
T ss_pred HHHhc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCccchH
Confidence 87765 457899999999999999999998889999998 99999999999999999997 899999997
Q ss_pred -----cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 -----FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 -----~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|.++ ..+++.+|. +.+++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+|
T Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~-~~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D 200 (387)
T PRK07683 128 PIIRLCGAKPVFIDTRSTGFRLTA-EALENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSD 200 (387)
T ss_pred HHHHHcCCEEEEeecCcccCCCCH-HHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEe
Confidence 55655 235677888 999998876 7899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|+++.|+ + +..++..+. +..+++|+++||||.| |+||+|+||++ +++++++.+.+... ...+++
T Consensus 201 e~y~~~~~~-~-~~~~~~~~~-------~~~~~vi~~~s~SK~~-~~pGlRiG~i~---~~~~l~~~~~~~~~~~~~~~~ 267 (387)
T PRK07683 201 EIYSELVYE-Q-PHTSIAHFP-------EMREKTIVINGLSKSH-SMTGWRIGFLF---APSYLAKHILKVHQYNVTCAS 267 (387)
T ss_pred cccccceeC-C-CcCChhhcc-------CCcCCeEEEeeccccc-cCccceeEEEE---cCHHHHHHHHHHHHhccCCCC
Confidence 999998873 3 233444321 2234799999999999 99999999999 68999999987764 345678
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhc
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
.+.|.++..++.+.. .+.++.++.++++++.+.+.|++. |+.+..|+|++|+|+.+... .
T Consensus 268 ~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~-------- 327 (387)
T PRK07683 268 SISQYAALEALTAGK----------DDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGHF-T-------- 327 (387)
T ss_pred hHHHHHHHHHHhCCh----------HHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecccC-C--------
Confidence 899999999986421 234457888999999999999987 88888999999999654310 1
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.++.+++..+++++||.+.||+.|+. .+.+++||+++.+++++.+++++|++++.+.
T Consensus 328 --~~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 328 --MSSFDFALDLVEEAGLAVVPGSAFSE-YGEGYVRLSYAYSIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 13556777788999999999999975 3457999999987899999999999887643
No 45
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.2e-47 Score=382.92 Aligned_cols=357 Identities=18% Similarity=0.249 Sum_probs=290.7
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
++.++.+++.+.++.+...++ ..++|+|+.|.|+. +. ++.+.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~~~~------------------------~~-----~~~~~~~~~ 53 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAA-----EHGAINLSQGFPDF------------------------DG-----PPYLVEALA 53 (386)
T ss_pred hhhHhhccCccHHHHHHHHHh-----hCCEEEecCCCCCC------------------------CC-----CHHHHHHHH
Confidence 455677777776665543332 34689999999985 33 677888877
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
+.+.. ....|++..|.++||+++++++.+.+|.+++++ +|++|+|+++++..++.+++ ++||+|+++
T Consensus 54 ~~~~~---~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vli~~p~y~~~~ 129 (386)
T PRK09082 54 YAMAA---GHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALV-RPGDEVIVFDPSYDSYA 129 (386)
T ss_pred HHHHc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhhH
Confidence 77654 346899999999999999999998889888876 89999999999999999997 999999997
Q ss_pred -----cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 -----FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 -----~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|+++ ...++.+|+ +.+++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+|
T Consensus 130 ~~~~~~g~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~D 202 (386)
T PRK09082 130 PAIELAGGRAVRVALQPPDFRVDW-QRFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSD 202 (386)
T ss_pred HHHHHcCCEEEEEecCcccccCCH-HHHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEe
Confidence 56665 234688999 999999876 7999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|.++.|+ +.+..++..+ + ....++|+++||||.| |++|+|+||++ +++++++.+.+... ..++++
T Consensus 203 e~y~~~~~~-~~~~~s~~~~-~------~~~~~~i~~~S~SK~~-~~~G~RiG~iv---~~~~l~~~~~~~~~~~~~~~~ 270 (386)
T PRK09082 203 EVYEHIVFD-GAGHASVLRH-P------ELRERAFVVSSFGKTY-HVTGWKVGYCV---APAALSAEFRKVHQYNTFTVN 270 (386)
T ss_pred hhhhhhccC-CCCCCChhhC-c------CccCcEEEEeechhhc-cchhhhhhhhh---CCHHHHHHHHHHHhhhcCCCC
Confidence 999999883 4444455443 1 1235899999999999 89999999999 69999999988875 567889
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhc
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
.+.|.++..++.. ..++.+++++.|+++++++.+.|++. |+.+.+++|++|+|++++-..+
T Consensus 271 ~~~q~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~-------- 331 (386)
T PRK09082 271 TPAQLALADYLRA----------EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAISD-------- 331 (386)
T ss_pred hHHHHHHHHHHhC----------ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccCC--------
Confidence 9999999888752 12334457888999999999999986 8898899999999976641011
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCC-CCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEATGISTVPGSGFGQ-KEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.++.+++..+++++||.+.||+.|+. +.+.+++||+++.+++++++++++|++
T Consensus 332 --~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 332 --LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred --CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 13567777778899999999999864 334579999999888999999999875
No 46
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=9.1e-47 Score=386.48 Aligned_cols=331 Identities=20% Similarity=0.317 Sum_probs=261.2
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCC--CCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------c
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGY--PSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------F 162 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~--~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~ 162 (463)
....|+++.|.++||++||+|+++++|. ++++++|++|+|+++++..++.+++ +|||.|++| .
T Consensus 78 ~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~~~~~~~ 156 (468)
T PLN02450 78 ELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-EPGDAFLLPTPYYPGFDRDLKWRT 156 (468)
T ss_pred hhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-CCCCEEEECCCCCCchHHHHhhcC
Confidence 3456999999999999999999887774 4789999999999999999999998 999999997 3
Q ss_pred Ccee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+++ + ++++.+|+ +.+++++++..+.+.++|+|++||||||||.++|.+++++|+++|++++++||+||+|++
T Consensus 157 g~~~v~v~~~~~~~~~~~~-~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~ 235 (468)
T PLN02450 157 GVEIVPIHCSSSNGFQITE-SALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSG 235 (468)
T ss_pred CcEEEEEecCCccCCcCCH-HHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccc
Confidence 5554 2 46788999 999999876544445799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCC-CCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGL-PFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQI 315 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~ 315 (463)
+.|+ +.++.++..+....+. +.+...++++++||||.| |+||+|+||++. .++.+++.+.+... ...++.+.|.
T Consensus 236 ~~f~-~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~--~~~~l~~~~~~~~~-~~~~s~~~Q~ 310 (468)
T PLN02450 236 TVFD-SPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYS--NDEMVVSAATKMSS-FGLVSSQTQY 310 (468)
T ss_pred cccC-CCCcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEE--CCHHHHHHHHHHhh-cCCCCHHHHH
Confidence 8883 3344455444221000 002345899999999999 999999999994 23456676666644 3457899999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD 395 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (463)
++..+|++. .+.. .++++.++.|+++++.+.+.|+++ |+.+.+|+||+|+|++++ ... + ...+.+.
T Consensus 311 a~~~~L~~~-----~~~~--~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~--~~~-~---~~~~~~~ 376 (468)
T PLN02450 311 LLSALLSDK-----KFTK--NYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMR--HLL-K---SNTFEAE 376 (468)
T ss_pred HHHHHhCCc-----hhHH--HHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEch--Hhc-C---cCCchHH
Confidence 999999742 2221 134457888999999999999998 898889999999997764 210 0 0001123
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 041151 396 VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 396 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.+++..+++++||.+.||+.|+.. +.+|+||+++ .+++++++++++|++++++..
T Consensus 377 ~~l~~~ll~~~gV~v~PG~~f~~~-~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 377 MELWKKIVYEVKLNISPGSSCHCT-EPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHHhCCEEEeCccccCCC-CCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 456777788899999999999863 4569999999 588999999999999987654
No 47
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-46 Score=378.05 Aligned_cols=362 Identities=19% Similarity=0.246 Sum_probs=296.3
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++..+.++.++++...+.+.++.+++.++|+.|+|+. +. ++.+.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~ 52 (386)
T PRK07550 2 LNPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGY------------------------PP-----PPELLRALA 52 (386)
T ss_pred cchhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5677888888899999999888888888999999999885 32 667777777
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
+.+.. .....|++..|.++||+++++++.+.+|..+++++|++|+|+++++..++.+++ ++||+|+++
T Consensus 53 ~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~ 129 (386)
T PRK07550 53 EAAAD--PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA-GAGDEVILPLPWYFNHKM 129 (386)
T ss_pred HHHhC--cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc-CCCCEEEEcCCCCcchHH
Confidence 76643 245789999999999999999999999999999999999999999999999997 899999997
Q ss_pred ----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|+++ + +.++.+|. +.+++.+++ ++++|++++||||||.++|.+++++|+++|++++++||+|
T Consensus 130 ~~~~~g~~~~~v~~~~~~~~~~~~-~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~D 202 (386)
T PRK07550 130 WLDMLGIRPVYLPCDEGPGLLPDP-AAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILD 202 (386)
T ss_pred HHHhcCCEEEEEecCCCcCCCCCH-HHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEe
Confidence 56665 2 34677899 999999987 7999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|+++.+. .....++... . +...++|+++||||++ |++|+|+||++ +++++++.+.+... ...+++
T Consensus 203 d~y~~~~~~-~~~~~~~~~~-~------~~~~~~i~~~S~SK~~-g~~G~RiG~i~---~~~~~~~~~~~~~~~~~~~~s 270 (386)
T PRK07550 203 ETYRDFDSG-GGAPHDLFAD-P------DWDDTLVHLYSFSKSY-ALTGHRVGAVV---ASPARIAEIEKFMDTVAICAP 270 (386)
T ss_pred ccchhhccC-CCCCcchhhC-C------CccccEEEEecchhhc-cCcccceEeee---cCHHHHHHHHHHHhhcccCCC
Confidence 999988662 2222233221 0 1234799999999999 89999999999 58889998888775 567789
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhc
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
.+.|.++..++.+ + .++.++.++.++++++.+.+.|..++++.+ .+.|++|+|++++.. +
T Consensus 271 ~~~q~~~~~~l~~-------~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~-~-------- 330 (386)
T PRK07550 271 RIGQIAVAWGLPN-------L---ADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGAYFAYVRHPFP-D-------- 330 (386)
T ss_pred cHHHHHHHHHhcc-------H---HHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCceEEEEecCCCC-C--------
Confidence 9999999998852 2 334455778899999999999988756654 467899999654310 1
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKF 446 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~ 446 (463)
.++.+++..+++++||.|.||..|+. .+.+++||+++ .+++++++++++|+++
T Consensus 331 --~~~~~l~~~l~~~~gv~v~pg~~f~~-~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 331 --RPSREVARRLAKEAGILCLPGTMFGP-GQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred --CCHHHHHHHHHHhcCEEEeCchhhCC-CCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 13567777777889999999999975 34569999999 6789999999999876
No 48
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2e-46 Score=378.25 Aligned_cols=366 Identities=21% Similarity=0.344 Sum_probs=289.6
Q ss_pred hhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhh
Q 041151 15 VKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLS 94 (463)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~ 94 (463)
+.+.+++.+......+.+.++.++++++|+.|+|+. +. |+.+++++.+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~------------------------~~-----~~~~~~~~~~~~~ 56 (395)
T PRK08175 6 IDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDG------------------------PT-----PPHIVEKLCEVAQ 56 (395)
T ss_pred hhcCCchHHHHHHHHHHHHHhcCCCeEEcCCCCCCC------------------------CC-----CHHHHHHHHHHHh
Confidence 344455544334444455666788899999999995 32 6678888777664
Q ss_pred hcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc------------
Q 041151 95 LTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL------------ 161 (463)
Q Consensus 95 ~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------ 161 (463)
. .....|+++.|.++||+++++|+.+++|+.++++ +|++|+|+++++..++..++ +|||+|+++
T Consensus 57 ~--~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~ 133 (395)
T PRK08175 57 R--PDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL-DHGDTVLVPNPSYPIHIYGAV 133 (395)
T ss_pred C--CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHH
Confidence 4 2457899999999999999999998889999887 89999999999999999997 999999997
Q ss_pred -cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccccc
Q 041151 162 -FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQN 237 (463)
Q Consensus 162 -~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~ 237 (463)
.|+++ +.+..+.+. +.++++++.. .+++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++
T Consensus 134 ~~g~~~~~v~~~~~~~~~-~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l 209 (395)
T PRK08175 134 IAGAQVRSVPLVEGVDFF-NELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADI 209 (395)
T ss_pred HcCCeEEEEecccCCCcH-HHHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhh
Confidence 45554 333333456 8888887641 126899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHH
Q 041151 238 IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIF 316 (463)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~ 316 (463)
.| ++....++..+ + ...+++|+++||||.| |+||+|+||++ +++++++.+.+... ..++++.+.|.+
T Consensus 210 ~~-~~~~~~~~~~~-~------~~~~~~i~~~S~SK~~-g~pGlRiG~~~---~~~~l~~~~~~~~~~~~~~~~~~~q~~ 277 (395)
T PRK08175 210 VY-DGWKAPSIMQV-P------GAKDVAVEFFTLSKSY-NMAGWRIGFMV---GNPELVSALARIKSYHDYGTFTPLQVA 277 (395)
T ss_pred cc-CCCCCcchhcC-C------CcccCEEEEeeccccc-cCcchhheeee---CCHHHHHHHHHHHhhcccCCCcHHHHH
Confidence 88 44444454432 1 1124689999999999 89999999999 69999999988876 467778889998
Q ss_pred HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChH
Q 041151 317 MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDV 396 (463)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (463)
+..++.. ..++.+.+++.|+++++++.+.|+.. |+.+..|+|++|+|++++.... ..++.
T Consensus 278 ~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~---------~~~~~ 337 (395)
T PRK08175 278 AIAALEG----------DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYA---------AMGSL 337 (395)
T ss_pred HHHHHhC----------cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccC---------CCCHH
Confidence 8888752 12345567889999999999999998 8888889999999976642110 01256
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 397 FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 397 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
+++..+++++||.|.||..|+. .+.+++||+++.+.+.+++++++|++++++
T Consensus 338 ~~~~~l~~~~gv~v~p~~~f~~-~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 338 EFAKKLLNEAKVCVSPGIGFGD-YGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHhCCEEEeCchhhCc-CCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 6767778889999999999975 355689999997789999999999988863
No 49
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.1e-46 Score=378.95 Aligned_cols=366 Identities=20% Similarity=0.300 Sum_probs=291.7
Q ss_pred chhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCC
Q 041151 20 YAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGG 99 (463)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~ 99 (463)
-.+|+++...+.+....|.++++|+.|+|.. .|. .+. ++.+.+++.+.+... .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-----------------~~~---~~~-----~~~~~~~~~~~l~~~--~ 65 (403)
T TIGR01265 13 VNPIRAIVDNLKVKPNPEKPIIPLSHGDPSV-----------------FGN---LRT-----DPEAEEAVKDALRSG--K 65 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCCCCc-----------------cCC---CCC-----CHHHHHHHHHHHhcC--C
Confidence 4568888888888877789999999999962 001 122 778888888777652 3
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW 166 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~ 166 (463)
...|++..|.+++|++++++++.++++.+++++|++|+|+++++..++.++. ++||+|+++ .|.++
T Consensus 66 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 144 (403)
T TIGR01265 66 FNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA-NPGANILVPRPGFPLYDTRAAFSGLEV 144 (403)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 4589889999999999999999888888899999999999999999999997 899999997 46555
Q ss_pred ------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 167 ------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 167 ------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
+..++++|+ +.+++.+.+ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|+
T Consensus 145 ~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~ 217 (403)
T TIGR01265 145 RLYDLLPEKDWEIDL-DGLEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFG 217 (403)
T ss_pred EEecCCcccCCccCH-HHHHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC
Confidence 234678999 999998876 7899999999999999999999999999999999999999999999883
Q ss_pred CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh-----HHHHHHhhhhhcccCChHHHH
Q 041151 241 DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK-----TVDEIYKIASIALSPNVPAQI 315 (463)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~q~ 315 (463)
+.+..++..+ +...++|+++||||+| ++||+|+||+++++ +++ +++.+.+......+++.+.|.
T Consensus 218 -~~~~~~~~~~--------~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 286 (403)
T TIGR01265 218 -DAPFIPMASF--------ASIVPVLSLGGISKRW-VVPGWRLGWIIIHD-PHGIFRDTVLQGLKNLLQRILGPATIVQG 286 (403)
T ss_pred -CCCccchhhh--------ccCCcEEEEeeccccc-CCCcceEEEEEEeC-chhhhHHHHHHHHHHHhhhhcCCChHHHH
Confidence 4444555554 4444799999999998 89999999999521 212 444454444335678999999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD 395 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (463)
++..++.+. ...+.++.++.++++++.+.+.|+.++|+.+..|+|++|+|++++... . .+..++
T Consensus 287 ~~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~--~-----~~~~~~ 350 (403)
T TIGR01265 287 ALPDILENT---------PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELEL--F-----PEIKDD 350 (403)
T ss_pred HHHHHHHhC---------hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccc--c-----CCCCCH
Confidence 999988521 123455678889999999999999888888888999999997654210 0 001135
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 396 VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 396 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|+++++++
T Consensus 351 ~~~~~~l~~~~gv~v~pg~~f~~---~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 351 VDFCEKLVREESVICLPGSAFGL---PNWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred HHHHHHHHHhCCEEEeCccccCC---CCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 67777778899999999999974 35899999977889999999999888654
No 50
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.3e-47 Score=381.79 Aligned_cols=339 Identities=20% Similarity=0.244 Sum_probs=282.0
Q ss_pred hhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCcc
Q 041151 24 GELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAY 103 (463)
Q Consensus 24 ~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y 103 (463)
......++++.-.+.++++|++|+|+. +. |+.+ +++.+++.. ....|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~e~~~------------------------~~-----~~~~-~~~~~~~~~---~~~~Y 58 (373)
T PRK07324 12 LNVYEKSATYDIAESCIDSLTLEELLA------------------------LA-----GKNP-EAFYQELGQ---KKLTY 58 (373)
T ss_pred HHHhhccCccccccCCCCCCcHHHHHh------------------------cc-----Ccch-HHHHHHHhc---CCccC
Confidence 344455555666788899999999986 33 5566 777777765 44689
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----
Q 041151 104 SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---- 166 (463)
Q Consensus 104 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---- 166 (463)
++..|.++||++||+++.. +++++|++|+|+++++..++.+++ ++||+|+++ .|+++
T Consensus 59 ~~~~G~~~lr~~ia~~~~~-----~~~~~vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~ 132 (373)
T PRK07324 59 GWIEGSPEFKEAVASLYQN-----VKPENILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLYDIPESLGAEVDYWQ 132 (373)
T ss_pred CCCCCCHHHHHHHHHHhcC-----CChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEe
Confidence 9999999999999999852 678999999999999999999998 999999996 56665
Q ss_pred --cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCC
Q 041151 167 --KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERP 244 (463)
Q Consensus 167 --~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~ 244 (463)
.+.++.+|+ +.+++.+++ ++|+|++++||||||.+++.+++++|+++|+++|++||+||+|..+.++ + .
T Consensus 133 ~~~~~~~~~d~-~~l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~-~-~ 203 (373)
T PRK07324 133 LKEENGWLPDL-DELRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED-G-S 203 (373)
T ss_pred cccccCCCCCH-HHHHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-C-C
Confidence 234577899 999988876 7999999999999999999999999999999999999999999998773 2 2
Q ss_pred ccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCC
Q 041151 245 FVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNP 323 (463)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 323 (463)
..++... . +++|+++||||+| |++|+|+||++ +++++++.+.+.+. ..++++.+.|.++..+++.
T Consensus 204 ~~s~~~~--------~--~~~I~~~s~SK~~-~~~G~RiG~i~---~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~ 269 (373)
T PRK07324 204 TPSIADL--------Y--EKGISTNSMSKTY-SLPGIRVGWIA---ANEEVIDILRKYRDYTMICAGVFDDMLASLALEH 269 (373)
T ss_pred CCChhhc--------c--CCEEEEecchhhc-CCccceeEEEe---cCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC
Confidence 3444332 2 3689999999999 99999999999 58999999999886 4677889999999888752
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHH
Q 041151 324 LKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLL 403 (463)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 403 (463)
....+++.++.++++++.+.+.|++.+++.+..|+|++|+|++++.+. ++.+++.+++
T Consensus 270 ----------~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~------------~~~~~~~~ll 327 (373)
T PRK07324 270 ----------RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM------------PSEDFCLKLL 327 (373)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC------------CHHHHHHHHH
Confidence 223455678889999999999998887888899999999897776432 3677888888
Q ss_pred HhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 404 EATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 404 ~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
+++||.+.||+.|+.+ +++|||++.+++.+++++++|++++++
T Consensus 328 ~~~gv~v~pg~~F~~~---~~iRis~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 328 KETGVLLVPGNRFDLE---GHVRIGYCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred HhcCEEEECccccCCC---CeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999752 489999998789999999999998865
No 51
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-46 Score=377.82 Aligned_cols=366 Identities=23% Similarity=0.403 Sum_probs=294.1
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++++....++.++.+.+...+....+.++++|+.|.|+. +. |+.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~a~~ 53 (397)
T PRK07568 3 ISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDI------------------------KT-----PEVFFEAIK 53 (397)
T ss_pred hhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCC------------------------CC-----CHHHHHHHH
Confidence 5777877888888888877666665677899999999985 33 777777776
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------- 161 (463)
+... ....|++..|.+++|+++++++. .+|+.+++++|++|+|+++++..++.+++ ++||+|+++
T Consensus 54 ~~~~----~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~ 127 (397)
T PRK07568 54 NYDE----EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAIC-DPGDEILVPEPFYANYNG 127 (397)
T ss_pred HHhc----CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhc-CCCCEEEEecCCCccHHH
Confidence 5533 34689999999999999999997 57888999999999999999999999997 899999996
Q ss_pred ----cCcee---c---CCCccc-ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 ----FHTTW---K---RQQIGV-LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 ----~g~~~---~---~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ + +.++.. ++ +.|++.+++ ++++|++++||||||.+++.+++++|+++|++++++||+
T Consensus 128 ~~~~~g~~~~~v~~~~~~g~~~~~~-~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~ 200 (397)
T PRK07568 128 FATSAGVKIVPVTTKIEEGFHLPSK-EEIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLIS 200 (397)
T ss_pred HHHHcCCEEEEeecCcccCCCCCCH-HHHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 45555 2 234443 57 899988876 799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCC
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPN 310 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~ 310 (463)
||+|.++.|+ +.+..++..+. ...+++|+++||||.| |++|+|+||++. .++++++.+.+.....++++
T Consensus 201 De~y~~~~~~-~~~~~s~~~~~-------~~~~~~i~~~S~SK~~-~~~G~R~G~~~~--~~~~~~~~~~~~~~~~~~~s 269 (397)
T PRK07568 201 DEVYREFVYD-GLKYTSALSLE-------GLEDRVIIIDSVSKRY-SACGARIGCLIS--KNKELIAAAMKLCQARLSPP 269 (397)
T ss_pred eccchhcccC-CCCccChhhcC-------CCcCCEEEEecchhhc-cCCCcceEEEec--CCHHHHHHHHHHhhccCCCC
Confidence 9999998883 33444554431 1135799999999999 899999999994 35788888876654357889
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhc
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
.+.|.++..++++. ..+.+++++.|+++++.+.+.|++++|+.+..|+|++|+|+++. ..
T Consensus 270 ~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~--~~-------- 329 (397)
T PRK07568 270 TLEQIGAAALLDTP----------ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLP--VD-------- 329 (397)
T ss_pred cHHHHHHHHHhhCC----------HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecC--CC--------
Confidence 99999999998631 13345578889999999999999887888888999999996553 21
Q ss_pred CCCChHHHHHHHHHh-----cCeEeeCCCCCCCCC--CCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEA-----TGISTVPGSGFGQKE--GIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~-----~gI~v~pg~~f~~~~--~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
++.++...++++ +||.+.||..|+..+ +.+++||+++.+++++++++++|+++++++.+
T Consensus 330 ---~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 330 ---DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred ---CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 245666666654 699999999996422 34699999997679999999999999877553
No 52
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-46 Score=374.28 Aligned_cols=348 Identities=17% Similarity=0.227 Sum_probs=272.8
Q ss_pred ccchhhhhHHHHHHHHHHh-cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhc
Q 041151 18 VQYAVRGELYLRASELQKE-GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLT 96 (463)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~ 96 (463)
++++++..+...+.++... |.++++|+.|+|+. +. |+.+.+++.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~a~~~~~~-- 51 (374)
T PRK05839 3 FEPYPFEKLRELLKEITPNKEYKGLDLTIGEPQF------------------------ET-----PKFIQDALKNNAH-- 51 (374)
T ss_pred CCcchHHHHHHHHHHhhhcCCCCeEEcCCCCCCC------------------------CC-----CHHHHHHHHHHhh--
Confidence 4566777777777778877 67999999999985 43 6667777665443
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEEc-------------c
Q 041151 97 SGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVLL-------------F 162 (463)
Q Consensus 97 ~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlvp-------------~ 162 (463)
....|+++.|.++||+++|+|+++++|+++++++|++|+|+++++..++.+++. ++||.|++| .
T Consensus 52 --~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~ 129 (374)
T PRK05839 52 --LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS 129 (374)
T ss_pred --ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhc
Confidence 357899999999999999999999999999999999999999999999888741 478999996 5
Q ss_pred Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+++ ..+++.+|. +..+ + + ++|+|+++|||||||.++|.+++++|+++|+++|++||+||+|.+
T Consensus 130 g~~v~~v~~~~~~~~~~d~-~~~~--~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~ 199 (374)
T PRK05839 130 RAKVLLMPLTKENDFTPSL-NEKE--L-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSE 199 (374)
T ss_pred CCEEEEeecccccCCcCCc-chhh--h-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhh
Confidence 6666 234566666 4432 2 2 689999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQI 315 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~ 315 (463)
+.+ + .+..++.......+. ...+++|+++||||+| ++||+|+||++ +++++++++.+... ...+++.+.|.
T Consensus 200 ~~~-~-~~~~s~~~~~~~~~~--~~~~~vi~~~SfSK~~-~~~GlRiG~ii---~~~~~~~~~~~~~~~~~~~~~~~~q~ 271 (374)
T PRK05839 200 IYE-N-TPPPSLLEASILVGN--ESFKNVLVINSISKRS-SAPGLRSGFIA---GDASILKKYKAYRTYLGCASPLPLQK 271 (374)
T ss_pred ccc-C-CCCCCHhhhhcccCc--cccCcEEEEecccccc-CCccceeEEEe---cCHHHHHHHHHHHhhcCCCCChHHHH
Confidence 755 2 233344332110000 1235899999999999 89999999999 68999999988765 45678899999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD 395 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (463)
++..++.. ..+.+++++.++++++.+.+.| |+. .|+|++|+|++++ ++
T Consensus 272 ~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~---------------~~ 319 (374)
T PRK05839 272 AAAVAWLD-----------DEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVD---------------ND 319 (374)
T ss_pred HHHHHhcc-----------chHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCC---------------Ch
Confidence 98877642 2234457888999998888766 333 6889999996653 14
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCC-CCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 396 VFYCLRLLEATGISTVPGSGFGQK-EGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 396 ~~~~~~ll~~~gI~v~pg~~f~~~-~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.+++..+++++||.|.||+.|+.. .+.+|+|||++.+++++++++++|+++++
T Consensus 320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 566777777799999999988753 23579999999778999999999998875
No 53
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-46 Score=376.97 Aligned_cols=356 Identities=17% Similarity=0.219 Sum_probs=283.0
Q ss_pred chhhhhHHHHHHHHHH--hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcC
Q 041151 20 YAVRGELYLRASELQK--EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTS 97 (463)
Q Consensus 20 ~~~~~~~~~~~~~~~~--~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~ 97 (463)
.+++-.+..+.+.++. .++++++|+.|+|+. +. ++.+++++.+.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~------------------------~~-----~~~~~~~l~~~~~~-- 72 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDE------------------------MA-----DESVVEVLCEEAKK-- 72 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCC------------------------CC-----CHHHHHHHHHHHhC--
Confidence 3344455555555553 366799999999985 33 67788888776643
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHhcCCC-CCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------c
Q 041151 98 GGLGAYSDSRGIPGVRKEVAEFIERRDGYP-SDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------F 162 (463)
Q Consensus 98 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~ 162 (463)
.....|++ .|.++||+++|+|+.+++|+. ++++ +|++|+|++++|..++.+++ ++||.|++| .
T Consensus 73 ~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~ 150 (410)
T PRK06290 73 PENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI-NPGDVTLMTVPGYPVTGTHTKYY 150 (410)
T ss_pred CCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC-CCCCEEEEeCCCCccHHHHHHHc
Confidence 13457875 899999999999999888998 9987 89999999999999999998 999999997 5
Q ss_pred Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|.++ .+.++.+|+ +.+++.+.+ ++|+|+++|||||||.++|.+++++|+++|++|+++||+||+|.+
T Consensus 151 g~~v~~v~~~~~~~~~~d~-~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~ 223 (410)
T PRK06290 151 GGEVYNLPLLEENNFLPDL-DSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAA 223 (410)
T ss_pred CCEEEEEecCCCcCCcCCH-HHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhh
Confidence 6665 234577899 999998876 799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQI 315 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~ 315 (463)
+.|+ + .+.++..+. +..+++|+++||||.| |+||+|+||++ +++++++.+.+... ...+++.+.|.
T Consensus 224 ~~~~-~-~~~s~~~~~-------~~~~~~I~i~SfSK~~-g~~GlRiG~ii---~~~~l~~~l~~~~~~~~~~~~~~~q~ 290 (410)
T PRK06290 224 LTFD-G-KPLSFLSVP-------GAKEVGVEIHSLSKAY-NMTGWRLAFVV---GNELIVKAFATVKDNNDSGQFIAIQK 290 (410)
T ss_pred ceeC-C-CCcChhcCC-------CccccEEEEeechhhc-CCchhheEeEE---eCHHHHHHHHHHHhccccCCcHHHHH
Confidence 8873 3 233444331 2234689999999999 89999999999 69999999988775 45667789999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD 395 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (463)
++..++.+. .+.++.++.|+++++.+.+.|++. |+.+.+|+|+||+|++++ ..... ..+..++
T Consensus 291 aa~~~l~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp--~~~~~---~~~~~~~ 353 (410)
T PRK06290 291 AGIYALDHP-----------EITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAP--KGTKS---GIKFENA 353 (410)
T ss_pred HHHHHhhCc-----------HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECC--Ccccc---CCCCCCH
Confidence 999988631 234567888999999999999998 888888999999996553 21100 0001245
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 041151 396 VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 396 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+++..++++.+|.+.||+.|+ +++||+++ .++++.+++++.|++.+.++
T Consensus 354 ~~~~~~Ll~~~~v~~~p~~~~~-----~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 354 EEFSQYLIKEKLISTVPWDDAG-----HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred HHHHHHHHHhCCEEEECCcccc-----CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 6777777777788888988765 38999999 68899999999999888664
No 54
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.6e-46 Score=378.50 Aligned_cols=332 Identities=21% Similarity=0.324 Sum_probs=266.4
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcC--CCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------c
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------F 162 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~ 162 (463)
....|.+..|.+.||+++|+|+++.+| .++++++|++|+|+++++..++.+++ +|||.|++| .
T Consensus 87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~~~~~~~ 165 (447)
T PLN02607 87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRT 165 (447)
T ss_pred hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcC
Confidence 345688899999999999999998776 46899999999999999999999997 999999997 3
Q ss_pred Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+++ ..++|.+|+ +.+++++++..+.+.++|+|+++|||||||.++|++++++|+++|++++++||+||+|+.
T Consensus 166 g~~vv~v~~~~~~~f~~~~-~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~ 244 (447)
T PLN02607 166 GVKIVPIHCDSSNNFQVTP-QALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSG 244 (447)
T ss_pred CcEEEEEeCCCCCCCcCCH-HHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccc
Confidence 4444 235678999 999999987666667899999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIF 316 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~ 316 (463)
+.| ++.++.++..+..+++.+ +...++++++||||.| |++|+|+||++. .+++++..+.+... ...++.+.|.+
T Consensus 245 ~~f-~~~~f~S~~s~~~~~~~~-~~~~~v~vi~s~SK~f-g~~GlRvG~ivs--~n~~l~~~~~~~~~-~~~~s~~~q~~ 318 (447)
T PLN02607 245 SVF-SASEFVSVAEIVEARGYK-GVAERVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMSS-FTLVSSQTQHL 318 (447)
T ss_pred ccc-CCCCcccHHHHHhhcCCC-CCcCcEEEEEcchhcC-CCCcceEEEEEE--cCHHHHHHHHHHhh-cCCCCHHHHHH
Confidence 888 445566777664443100 1135899999999999 999999999995 36777777766644 34578899999
Q ss_pred HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChH
Q 041151 317 MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDV 396 (463)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (463)
+..+|.+.. ..+ ++.+..+++|+++++.+.+.|++. |+.+..++||+|+|++++ .. +. ......+.
T Consensus 319 ~~~~L~d~~----~~~---~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~--~~-~~---~~~~~~e~ 384 (447)
T PLN02607 319 LASMLSDEE----FTE---NYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLS--PL-LE---TPTREGEL 384 (447)
T ss_pred HHHHhCCch----hHH---HHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEch--Hh-hc---CCCchhHH
Confidence 999997532 122 334567889999999999999997 888889999999997764 11 00 00011134
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 397 FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 397 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
+++..+++++||.+.||+.|+.. ..+|+||+|+ .++++++++++||++++++.+.+
T Consensus 385 ~l~~~ll~~~gV~v~pG~~f~~~-~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 385 ALWDSILREVKLNISPGSSCHCS-EPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTA 441 (447)
T ss_pred HHHHHHHHhCCEEEcCccccCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 55667778889999999999863 4579999999 58999999999999999876543
No 55
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4e-46 Score=375.27 Aligned_cols=357 Identities=18% Similarity=0.307 Sum_probs=288.1
Q ss_pred hhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHH
Q 041151 13 ENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHY 92 (463)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~ 92 (463)
.++..++.+.+..+...+.+ .+++||+.|.|+. +. |+.+++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~g~p~~------------------------~~-----~~~~~~~~~~~ 49 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALAVR-----TGAVNLGQGFPDE------------------------DG-----PPEMLEAAQEA 49 (387)
T ss_pred hhhhhcCccHHHHHHHHHhh-----CCeEEccCCCCCC------------------------CC-----CHHHHHHHHHH
Confidence 45667788877777665532 3689999999995 33 66677777776
Q ss_pred hhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----------
Q 041151 93 LSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVVLL---------- 161 (463)
Q Consensus 93 ~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---------- 161 (463)
+.. ....|++..|.++||+++++++.+.+|++++++ +|++|+|+++++..++.+++ ++||+|+++
T Consensus 50 ~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vli~~p~y~~~~~~ 125 (387)
T PRK07777 50 IAG---GVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV-EPGDEVLLIEPYYDSYAAV 125 (387)
T ss_pred Hhc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHH
Confidence 654 346899999999999999999988899988887 79999999999999999997 899999986
Q ss_pred ---cCcee------cC-CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ---FHTTW------KR-QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ---~g~~~------~~-~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|.++ .. .++.+|+ ++|++.+.+ ++++|++++||||||.+++.+++++|+++|++++++||+|
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D 198 (387)
T PRK07777 126 IAMAGAHRVPVPLVPDGRGFALDL-DALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITD 198 (387)
T ss_pred HHHCCCEEEEeecCCccCCCcCCH-HHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEe
Confidence 45554 12 3567999 999998876 7899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCC
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPN 310 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~ 310 (463)
|+|.++.| ++..+.++..+ + +..+++|+++||||+| |+||+|+||++ +++++++.+.+... ..++++
T Consensus 199 e~y~~~~~-~~~~~~~~~~~-~------~~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~~l~~~~~~~~~~~~~~~~ 266 (387)
T PRK07777 199 EVYEHLVF-DGARHLPLATL-P------GMRERTVTISSAAKTF-NVTGWKIGWAC---GPAPLIAAVRAAKQYLTYVGG 266 (387)
T ss_pred ccchhccc-CCCCcccHhhC-C------CCcCcEEEEeechhhc-cCcCceeEEEe---cCHHHHHHHHHHHhhcccCCC
Confidence 99999888 33333444432 1 1134789999999999 89999999999 68999999887765 456778
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhc
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRA 390 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (463)
.+.|.++..++... ..+.+++++.++++++.+.+.|++. |+.+.+|+|+||+|++++...
T Consensus 267 ~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~~--------- 326 (387)
T PRK07777 267 APFQPAVAHALDHE----------DAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPLG--------- 326 (387)
T ss_pred CHHHHHHHHHHhCC----------cHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecccccC---------
Confidence 88998888887532 2334567889999999999999997 888889999999997654111
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCC--CCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 391 GKVPDVFYCLRLLEATGISTVPGSGFGQK--EGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 391 ~~~~~~~~~~~ll~~~gI~v~pg~~f~~~--~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
..++.+++..+++++||.|.||..|+.. .+.+++||+++.+++++++++++|+++.
T Consensus 327 -~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 327 -YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 1235677777778899999999999742 2356899999988899999999998765
No 56
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.7e-46 Score=378.84 Aligned_cols=357 Identities=20% Similarity=0.271 Sum_probs=274.8
Q ss_pred hhhhhhhccc-hhhhhHHHHHHHHHHh--cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHH
Q 041151 11 MNENVKKVQY-AVRGELYLRASELQKE--GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIA 87 (463)
Q Consensus 11 ~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 87 (463)
+++...++.. +.+..+...+++.... ++++++|+.|+|+. +. |+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~ 54 (409)
T PRK07590 4 INENYLKLKAGYLFPEIARRVNAFREANPEAKIIRLGIGDVTQ------------------------PL-----PPAVIE 54 (409)
T ss_pred cccccCccCCcchHHHHHHHHHHHhhhcCCCceEEecCcCCCC------------------------CC-----CHHHHH
Confidence 3444444443 4566676767776654 56799999999996 33 777888
Q ss_pred HHHHHhhhcC--CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----
Q 041151 88 RAKHYLSLTS--GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---- 161 (463)
Q Consensus 88 a~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---- 161 (463)
++.+++.... ....+|++..|.++||+++|+|+.+.+|+.+++++|++|+|+++++..+. .++ +|||+|+++
T Consensus 55 ~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~-~~gd~V~v~~P~Y 132 (409)
T PRK07590 55 AMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIF-GPDNTIAVTDPVY 132 (409)
T ss_pred HHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-Hhc-CCCCEEEEeCCCC
Confidence 8877776421 14578999999999999999999888999999999999999999999865 555 799999997
Q ss_pred ---------cCce-----------e---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHH
Q 041151 162 ---------FHTT-----------W---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLR 215 (463)
Q Consensus 162 ---------~g~~-----------~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~ 215 (463)
.|.+ + + +.++.+|. +. . ++|+|++||||||||.++|.++++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~-~~------~------~~k~i~l~nP~NPTG~~~s~~~~~ 199 (409)
T PRK07590 133 PVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPEL-PE------E------KVDIIYLCFPNNPTGTVLTKEQLK 199 (409)
T ss_pred cchHHHHHHcCCcccccccccccceeEeecccccCCcccC-cc------c------CceEEEEeCCCCCcCCcCCHHHHH
Confidence 5654 3 2 22344443 21 2 799999999999999999999999
Q ss_pred HHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhH
Q 041151 216 EILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT 295 (463)
Q Consensus 216 ~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~ 295 (463)
+|+++|++|+++||+||+|.++.+ ++..+.++..+ + ...+++|+++||||+| |+||+|+||++ +++++
T Consensus 200 ~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~-~------~~~~~vi~~~SfSK~~-~~pGlRiG~~i---~~~~l 267 (409)
T PRK07590 200 AWVDYAKENGSLILFDAAYEAFIS-DPSLPHSIYEI-E------GARECAIEFRSFSKTA-GFTGTRCAYTV---VPKEL 267 (409)
T ss_pred HHHHHHHHcCeEEEEEccchhhcc-CCCCCcchhhC-C------CcccceEEEecCcccc-CCcCceeEEEE---cCHHH
Confidence 999999999999999999999877 33333444433 1 1124789999999999 99999999999 58888
Q ss_pred HHHH------------Hhhhhhc-ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 296 VDEI------------YKIASIA-LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 296 ~~~l------------~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
++.+ ....... .+++.+.|.++..++... ...+.+++++.|+++++.+.+.|++. |+
T Consensus 268 i~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~---------~~~~~~~~~~~~~~~r~~l~~~L~~~-~~ 337 (409)
T PRK07590 268 KGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE---------GKAQIKELIDYYMENAKIIREGLESA-GF 337 (409)
T ss_pred hhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 8732 1222222 467889999998887521 12345567889999999999999998 78
Q ss_pred ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHH
Q 041151 363 VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMES 442 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~ 442 (463)
.+..|+|++|+|++++ .. .++.+++..+++++||.+.||+.|+. .+.+++||++..+++++++++++
T Consensus 338 ~~~~~~g~~f~wi~~~--~~----------~~~~~~~~~l~~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~~l~r 404 (409)
T PRK07590 338 EVYGGVNAPYIWVKTP--DG----------MSSWDFFDKLLQEANVVGTPGSGFGP-SGEGYFRLSAFGSRENVLEAMER 404 (409)
T ss_pred ceecCCcceEEEEECC--CC----------CCHHHHHHHHHHHCCEEEeChhHhCC-CCCCEEEEEccCCHHHHHHHHHH
Confidence 8888899999997654 21 12456677777889999999999975 35579999987778999999999
Q ss_pred HHHH
Q 041151 443 FKKF 446 (463)
Q Consensus 443 l~~~ 446 (463)
|+++
T Consensus 405 l~~~ 408 (409)
T PRK07590 405 IKKA 408 (409)
T ss_pred HHhh
Confidence 9875
No 57
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7e-46 Score=381.18 Aligned_cols=333 Identities=18% Similarity=0.311 Sum_probs=262.1
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcC--CCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------c
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------F 162 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~ 162 (463)
....|++..|.++||++||+|+++.+| +++++++|++|+|+++++..++.+++ +|||.|++| .
T Consensus 86 ~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~~~~~~~ 164 (496)
T PLN02376 86 DIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-DPGDVFLIPSPYYAAFDRDLRWRT 164 (496)
T ss_pred hhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhhC
Confidence 456789999999999999999998888 67899999999999999999999998 999999997 4
Q ss_pred Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+++ ..+++++|+ +.+++++....+.+.++|+|+++|||||||.++|.+++++|+++|++++++||+||+|+.
T Consensus 165 G~~vv~v~~~~~~~~~~~~-~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~ 243 (496)
T PLN02376 165 GVEIIPVPCSSSDNFKLTV-DAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAA 243 (496)
T ss_pred CCEEEEEeCCCCccCcCCH-HHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccc
Confidence 5555 235789999 999987654333334789999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIF 316 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~ 316 (463)
+.| ++.++.++..+.+++.......+++++++||||.| |+||+|+||++. .++.+++.+.+... ...++.+.|.+
T Consensus 244 ~~f-~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpGlRvG~li~--~~~~l~~~~~~~~~-~~~vs~~~Q~a 318 (496)
T PLN02376 244 TVF-AGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPGFRVGIVYS--FNDSVVSCARKMSS-FGLVSSQTQLM 318 (496)
T ss_pred ccc-CCCCcccHHHhhccccccccCCCeEEEEEeccccC-CCCcceEEEEEE--CCHHHHHHHHHHhh-cCCCCHHHHHH
Confidence 988 44456677666443200000113678899999999 999999999994 24666666655544 44689999999
Q ss_pred HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChH
Q 041151 317 MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDV 396 (463)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (463)
+..+|.+. .+ ..+.+...++.|+++++.+.+.|++. |+.+..|+||+|+|++++ ... .. .....++.
T Consensus 319 ~~~~L~d~-----~~--~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~--~~~-~~--~~~~~~e~ 385 (496)
T PLN02376 319 LASMLSDD-----QF--VDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLR--HLL-RD--RNSFESEI 385 (496)
T ss_pred HHHHhCCh-----hH--HHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEch--hhh-cc--CCchhHHH
Confidence 99999642 22 12334567888999999999999987 888889999999997764 210 00 00011235
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 041151 397 FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 397 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+++..++++.||.+.||+.|+.. +.+|+||+++ .++++++.++++|++++.+.+.
T Consensus 386 ~l~~~ll~~~gV~v~pGs~F~~~-~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 386 ELWHIIIDKVKLNVSPGSSFRCT-EPGWFRICFANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred HHHHHHHHcCCEEEeCccccCCC-CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 66777788889999999999763 4569999999 6889999999999999976543
No 58
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5e-45 Score=362.31 Aligned_cols=324 Identities=19% Similarity=0.338 Sum_probs=264.9
Q ss_pred ceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHH
Q 041151 40 IIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEF 119 (463)
Q Consensus 40 ~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 119 (463)
+++|+.|+|+. |. ++.+.+++.+... ....|+++.|.++||+++++|
T Consensus 2 ~~~~~~g~p~~------------------------~~-----~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~ 48 (350)
T TIGR03537 2 LFDFGTGDPKE------------------------PT-----PPFIRKALIDAVP----EVSQYPSALGTKALREAISGW 48 (350)
T ss_pred eEeccCCCCCC------------------------CC-----CHHHHHHHHHHHh----ccCCCCCCCCCHHHHHHHHHH
Confidence 68999999885 43 6778888776643 356899999999999999999
Q ss_pred HHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCC---CEEEEc-------------cCcee------cCCCcccChH
Q 041151 120 IERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEG---DGVVLL-------------FHTTW------KRQQIGVLII 176 (463)
Q Consensus 120 ~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~g---d~Vlvp-------------~g~~~------~~~~~~~d~~ 176 (463)
+.+.+|++++++ +|++|+|+++++..++.+++ ++| |.|++| .|+++ .++++.+|+
T Consensus 49 ~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~- 126 (350)
T TIGR03537 49 FERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRL- 126 (350)
T ss_pred HHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCH-
Confidence 998889999998 99999999999999999997 887 699997 67766 234677899
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.+++++++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|..+.++ . +..++...
T Consensus 127 ~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~-~~~~~~~~----- 193 (350)
T TIGR03537 127 EKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-E-PPHSALEV----- 193 (350)
T ss_pred HHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-C-CCCchhhc-----
Confidence 999999887 7999999999999999999999999999999999999999999988763 2 33344332
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFV 335 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 335 (463)
+ .+++|+++||||++ |++|+|+||++ +++++++.+..... ...+++.+.|.++..++.. .
T Consensus 194 ---~-~~~~i~~~s~SK~~-g~~GlRiG~~~---~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-----------~ 254 (350)
T TIGR03537 194 ---G-IENVLAFHSLSKRS-GMTGYRSGFVA---GDEKLISFLRKLRANFGVASPDFVQAAAKAAWSD-----------D 254 (350)
T ss_pred ---C-cCCEEEEeeccccc-CCccccceeee---cCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCC-----------c
Confidence 2 24799999999999 89999999998 68999999988765 4556666788888776642 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCC
Q 041151 336 RESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSG 415 (463)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~ 415 (463)
.+.++.++.++++++.+.+.|++. |+.+..|+|++|+|++++ .. .++.+++.. |.++||.|.||..
T Consensus 255 ~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~--~~----------~~~~~l~~~-L~~~gv~v~~g~~ 320 (350)
T TIGR03537 255 NHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVP--SG----------IDAKDYALR-LLENGIVVAPGEN 320 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECC--CC----------CCHHHHHHH-HHHCCEEEcCchh
Confidence 233456788999999999999987 888889999999997654 21 124555555 4568999999999
Q ss_pred CCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 416 FGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 416 f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
|+. .+.+++||+++.+++++++++++|++
T Consensus 321 f~~-~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 321 FGS-GEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred hCC-CCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 975 33568999998777999999998875
No 59
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=376.80 Aligned_cols=332 Identities=18% Similarity=0.282 Sum_probs=249.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHh-cCCCC-C--CCcEEEcCCcHHHHHHHHHH-----Hhc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERR-DGYPS-D--PELIFLTDGASKGVMQTLNC-----VIR 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~-~g~~~-~--~~~i~~t~G~~~al~~~~~~-----l~~ 152 (463)
|+.+.+ +.+++.. ..|+++.|.+++|++|++++.++ ++... . .++|++|+|+++++..++.+ ++
T Consensus 115 ~~~v~e-~~~~~~~-----~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll- 187 (527)
T PRK09275 115 DEFVYE-LVDGIIG-----DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLL- 187 (527)
T ss_pred CHHHHH-HHHHHhc-----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcC-
Confidence 667777 5555432 25999999999999999966443 33322 2 34999999999999999986 56
Q ss_pred CCCCEEEEc-------------c--Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCH
Q 041151 153 GEGDGVVLL-------------F--HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSE 211 (463)
Q Consensus 153 ~~gd~Vlvp-------------~--g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~ 211 (463)
+|||+|+++ . |.++ .+++|.+|. +++++++++ ++|+|+++|||||||.++|.
T Consensus 188 ~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~-~~l~~~~~~------~tkai~l~nP~NPTG~v~s~ 260 (527)
T PRK09275 188 KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPD-SELEKLRDP------SIKALFLVNPSNPPSVAMSD 260 (527)
T ss_pred CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCH-HHHHhhcCC------CCCEEEEeCCcCCcCCCCCH
Confidence 899999997 2 3433 245699999 999998776 89999999999999999999
Q ss_pred HHHHHHHHHhhh--CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 212 ANLREILRFCYQ--ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 212 ~~l~~l~~~a~~--~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+++++|+++|++ ++++||+||+|..+.+ .+.++... + . .++|+++||||+| |++|||+||++
T Consensus 261 e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~s~~~~---~----~--~~~I~v~SfSK~f-~mtG~RlG~i~-- 324 (527)
T PRK09275 261 ESLEKIADIVNEKRPDLMIITDDVYGTFVD----DFRSLFAV---L----P--YNTILVYSFSKYF-GATGWRLGVIA-- 324 (527)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCChhhcc----cccCHHHh---C----C--CCEEEEeehhhhc-cCcHhHHhhhh--
Confidence 999999999964 5999999999998754 23344432 1 2 3799999999999 99999999999
Q ss_pred CCChh-----HHHHH--------------------------------Hhhhh-hcccCChHHHHHHH-----HhcCCCCC
Q 041151 290 NIPPK-----TVDEI--------------------------------YKIAS-IALSPNVPAQIFMG-----LMVNPLKP 326 (463)
Q Consensus 290 ~~~~~-----~~~~l--------------------------------~~~~~-~~~~~~~~~q~~~~-----~~l~~~~~ 326 (463)
++++ ++..+ +++.. .+.+.+.+.|.+++ ++++..
T Consensus 325 -~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~-- 401 (527)
T PRK09275 325 -LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEE-- 401 (527)
T ss_pred -cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCc--
Confidence 4654 33222 34443 56788899998733 334321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh----cCCCChHHHHHHH
Q 041151 327 GDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR----AGKVPDVFYCLRL 402 (463)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l 402 (463)
....+.+++.|++|++.+.+.|. . ++...+|+|+||+|+++...........+ ....++.+++.++
T Consensus 402 --------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~L 471 (527)
T PRK09275 402 --------DAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRL 471 (527)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHH
Confidence 12344578899999999999882 2 33445799999999887521100000000 0012478899999
Q ss_pred HHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHHHhcccc
Q 041151 403 LEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFMEQYEDYR 458 (463)
Q Consensus 403 l~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~~~~~~~ 458 (463)
++++||.+.||+.||.. ++++|||++ .+++++.++.++|++++.+++++|+...
T Consensus 472 l~e~gV~v~PG~~Fg~~--~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~~~~~~ 526 (527)
T PRK09275 472 AEETGVVLLPGGGFGGP--EWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEEYKKSK 526 (527)
T ss_pred HhcCCEEEeCchhhCCC--CCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999863 458999999 7889999999999999999999997654
No 60
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=7.2e-45 Score=362.02 Aligned_cols=339 Identities=22% Similarity=0.309 Sum_probs=270.4
Q ss_pred ccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcC
Q 041151 18 VQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTS 97 (463)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~ 97 (463)
+++.+++.+.+.+.+.+.++.++++|+.|+|+. |. ++.+.+++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~~~~~~~~~-- 49 (357)
T TIGR03539 1 LPDFPWDSLAPYKAKAASHPDGIVDLSVGTPVD------------------------PV-----PPLIRAALAAAADA-- 49 (357)
T ss_pred CCcchHHHHHHHHHHhhhCCCCeEEccCCCCCC------------------------CC-----CHHHHHHHHHHHhh--
Confidence 367788999999999988888899999999985 32 66677776654432
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHhcCCC-CCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEEc-------------c
Q 041151 98 GGLGAYSDSRGIPGVRKEVAEFIERRDGYP-SDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVLL-------------F 162 (463)
Q Consensus 98 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlvp-------------~ 162 (463)
..|+++.|.++||+++++|+.+++|++ +++++|++|+|+++++..++..+ + ++||.|+++ .
T Consensus 50 ---~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~~~~~~~~~~ 125 (357)
T TIGR03539 50 ---PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAYPTYEVGALLA 125 (357)
T ss_pred ---CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcHHHHHHHHhc
Confidence 579999999999999999999888997 99999999999999999999887 6 899999997 3
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ ..+ |+ +.+.. . ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|+
T Consensus 126 g~~~~~v~----~~-~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~- 190 (357)
T TIGR03539 126 GATPVAAD----DP-TELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWE- 190 (357)
T ss_pred CCEEeccC----Ch-hhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccC-
Confidence 3333 111 33 44332 2 7899999999999999999999999999999999999999999988773
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHh
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLM 320 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~ 320 (463)
+.. .+. +.+.. .+ ....++|+++||||.| +++|+|+||++ +++++++.+.+... ..++++.+.|.++..+
T Consensus 191 ~~~-~~~--~~~~~-~~-~~~~~vi~~~S~SK~~-~~~G~R~G~~i---~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 261 (357)
T TIGR03539 191 GRP-VSI--LDPRV-CG-GDHTGLLAVHSLSKRS-NLAGYRAGFVA---GDPALVAELLTVRKHAGLMVPAPVQAAMVAA 261 (357)
T ss_pred CCC-ccc--eeccc-CC-CccccEEEEecccccc-CCCceeEEEEe---cCHHHHHHHHHHHhhcccCCCHHHHHHHHHH
Confidence 322 121 11110 00 1224799999999999 89999999999 68999999987765 4678899999999999
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHH
Q 041151 321 VNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCL 400 (463)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (463)
|.+ ..+.+.+++.|+++++.+.+.|++. |+.+.+|+|++|+|+++. . +..++ .
T Consensus 262 l~~-----------~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~--~------------~~~~~-~ 314 (357)
T TIGR03539 262 LGD-----------DGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRG--E------------DAWDT-V 314 (357)
T ss_pred cCC-----------HHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECC--C------------CHHHH-H
Confidence 852 1223457888999999999999987 888889999999996543 1 13333 4
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHH
Q 041151 401 RLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESF 443 (463)
Q Consensus 401 ~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l 443 (463)
..|+++||.+.||..|+. .+.+++|||++.+++++++++++|
T Consensus 315 ~~l~~~gV~v~pg~~f~~-~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 315 DRLAELGILVAPGDFYGP-AGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred HHHHhCCEEECCccccCC-CCCCeEEEEecCCHHHHHHHHHhh
Confidence 567889999999998865 355799999997779999999876
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.5e-45 Score=373.21 Aligned_cols=310 Identities=15% Similarity=0.113 Sum_probs=250.5
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-
Q 041151 83 ADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL- 161 (463)
Q Consensus 83 ~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp- 161 (463)
+.+.+++.+... ....|+++.|.++||+++++|+....+ .+++|++|+|++++|..++.+++ +|||.|+++
T Consensus 101 p~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~~ 172 (431)
T PRK15481 101 PDLSRYFARLSR----TPRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCAHL-LPGDSVAVED 172 (431)
T ss_pred HHHHHHHHHhhh----hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHHhC-CCCCEEEEeC
Confidence 445555554433 235799999999999999999875322 34699999999999999999998 999999997
Q ss_pred ------------cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhC-
Q 041151 162 ------------FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQE- 224 (463)
Q Consensus 162 ------------~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~- 224 (463)
.|+++ +.+..++|+ +.|++++++ ++|+|+++ |||||||.++|.+++++|+++|+++
T Consensus 173 P~y~~~~~~~~~~g~~~~~v~~~~~g~~~-~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~ 245 (431)
T PRK15481 173 PCFLSSINMLRYAGFSASPVSVDAEGMQP-EKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYP 245 (431)
T ss_pred CCcHHHHHHHHHcCCeEEeeccCCCCCCH-HHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcC
Confidence 67666 444457899 999999876 78999998 9999999999999999999999999
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS 304 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 304 (463)
+++||+||+|.++.+. +. .+... ....++|+++||||+| + ||+|+||++ +++++++.+.+...
T Consensus 246 ~~~ii~De~Y~~~~~~-~~--~~~~~---------~~~~~vi~~~SfSK~~-~-~GlRiG~~i---~~~~~~~~~~~~~~ 308 (431)
T PRK15481 246 QVLVIIDDHFALLSSS-PY--HSVIP---------QTTQRWALIRSVSKAL-G-PDLRLAFVA---SDSATSARLRLRLN 308 (431)
T ss_pred CceEEecCchhhhccC-CC--CCCCc---------CCCCCEEEEeeecccc-C-CCceeEEEe---CCHHHHHHHHHHHh
Confidence 9999999999998762 21 22211 1124899999999999 8 999999999 68999999977654
Q ss_pred -hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhh
Q 041151 305 -IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKA 383 (463)
Q Consensus 305 -~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~ 383 (463)
...+++.+.|.++..+|++. . +.++++++++.|+++++.+.+.|++. |+.+..|+||+|+|++++ .
T Consensus 309 ~~~~~~s~~~q~a~~~~l~~~-----~---~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~--~-- 375 (431)
T PRK15481 309 SGTQWVSHLLQDLVYACLTDP-----E---YQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLD--T-- 375 (431)
T ss_pred ccccCCCHHHHHHHHHHHhCc-----c---HHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECC--C--
Confidence 34678999999999999743 2 33445668999999999999999988 888878999999996654 2
Q ss_pred HHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHH
Q 041151 384 IEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~ 448 (463)
++.+++.. |.++||.+.||+.|+.....+++|||++ .+++++++++++|++++.
T Consensus 376 ----------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 ----------DSQATALT-LAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ----------CHHHHHHH-HHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 13444444 5678999999999975433458999999 688999999999998864
No 62
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.3e-44 Score=361.26 Aligned_cols=345 Identities=20% Similarity=0.312 Sum_probs=267.2
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
.+|.++...+..++..+ +......+.++++|+.|+|+. |. ++.+.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~l~~~~p~~------------------------~~-----~~~~~~~~ 49 (364)
T PRK07865 2 PVSARLPDFPWDTLAPA---KATAAAHPDGIVDLSVGTPVD------------------------PV-----PPVIQEAL 49 (364)
T ss_pred CccccCCCccHHHHHHH---HHHHHhcCCCEEEcCCCCCCC------------------------CC-----CHHHHHHH
Confidence 35667766665544443 333334566799999999874 33 66677776
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCC-CCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEEc------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYP-SDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVLL------ 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlvp------ 161 (463)
.+.... .+|+++.|.++||+++++|+.+++|++ +++++|++|+|+++++..++.++ + ++||.|+++
T Consensus 50 ~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~~ 123 (364)
T PRK07865 50 AAAADA-----PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL-GPGDVVVIPELAYPT 123 (364)
T ss_pred HHHHhh-----CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCccc
Confidence 654332 489999999999999999999999997 99999999999999999988887 6 899999997
Q ss_pred -------cCcee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccc
Q 041151 162 -------FHTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEV 233 (463)
Q Consensus 162 -------~g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Dea 233 (463)
.|.++ ..+ ++ +.+++ . ++++|++++||||||.+++.+++++|+++|++++++||+||+
T Consensus 124 ~~~~~~~~g~~~~~~~----~~-~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~ 189 (364)
T PRK07865 124 YEVGARLAGATVVRAD----SL-TELGP---Q------RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDEC 189 (364)
T ss_pred HHHHHHhcCCEEEecC----Ch-hhCCc---c------cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 34444 111 23 44432 2 789999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChH
Q 041151 234 YQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVP 312 (463)
Q Consensus 234 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 312 (463)
|.++.++ +. ..+... +... + ....++|+++||||.| |+||+|+||++ +++++++.+.+... ..++++.+
T Consensus 190 y~~~~~~-~~-~~~~~~--~~~~-~-~~~~~~i~~~S~SK~~-~~~GlRiG~i~---~~~~~~~~~~~~~~~~~~~~~~~ 259 (364)
T PRK07865 190 YLELGWD-AE-PVSILD--PRVC-G-GDHTGLLAVHSLSKQS-NLAGYRAGFVA---GDPALVAELLEVRKHAGMMVPAP 259 (364)
T ss_pred hhhhccC-CC-CCcccc--cccc-C-CccceEEEEeechhcc-CCCceeeEEEe---cCHHHHHHHHHHHHhcCCCcCHH
Confidence 9998773 32 222111 1100 0 1235899999999999 89999999998 69999999987764 56788999
Q ss_pred HHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCC
Q 041151 313 AQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGK 392 (463)
Q Consensus 313 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 392 (463)
.|.++..++.+ .++.++.++.|+++++.+.+.|++. |+.+..|+|++|+|+.+. .
T Consensus 260 ~q~~~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~----------- 314 (364)
T PRK07865 260 VQAAMVAALGD-----------DAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRG--E----------- 314 (364)
T ss_pred HHHHHHHHhCC-----------HHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCC--C-----------
Confidence 99999998852 1234457788999999999999987 888888999999996553 1
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHH
Q 041151 393 VPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFK 444 (463)
Q Consensus 393 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~ 444 (463)
+..++ .+.|+++||.+.||..|+. .+.+++||+++.+++++++++++|+
T Consensus 315 -~~~~~-~~~l~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 -DCWDT-VAWLAERGILVAPGDFYGP-AGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred -CHHHH-HHHHHHCCEEEeCccccCc-CCCCEEEEEecCCHHHHHHHHHHhh
Confidence 12333 4567889999999998875 3456999999977899999999885
No 63
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-44 Score=362.88 Aligned_cols=362 Identities=13% Similarity=0.123 Sum_probs=269.6
Q ss_pred hhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCc-CCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 11 MNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPH-ALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
+..++...+.++++.+...+++.. +++++||+.|.|. . +. |....+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~~~~~------------------------~~-----~~~~~~~~ 52 (404)
T PTZ00376 4 LFSQVPLGPPDPILGLAAAFKADP--SPSKVNLGIGAYRDE------------------------NG-----KPYVLESV 52 (404)
T ss_pred hhhcCCcCCCChHHHHHHHHhhcC--CcccEecccceeECC------------------------CC-----CEehhhHH
Confidence 355666778888877776664332 4578999999874 2 11 22333333
Q ss_pred HHHhhhc--CCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEE--EcCCcHHHHHHHHH---HHhcCCCCEEEEc-
Q 041151 90 KHYLSLT--SGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIF--LTDGASKGVMQTLN---CVIRGEGDGVVLL- 161 (463)
Q Consensus 90 ~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~~~---~l~~~~gd~Vlvp- 161 (463)
.+++... .....+|+++.|.++||+++++|+...++..+++++|+ .|.|+++++..++. +++ +|||+|+++
T Consensus 53 ~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-~~Gd~Vlv~~ 131 (404)
T PTZ00376 53 RKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-PAGTTVYVSN 131 (404)
T ss_pred HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-CCCCEEEEcC
Confidence 3333111 12457899999999999999999976666678899999 59999999988875 566 899999997
Q ss_pred ------------cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh
Q 041151 162 ------------FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 ------------~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|+++ + ++++++|+ +.+++.++.. .++++++++++||||||.++|.+++++|+++|++
T Consensus 132 P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~-~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~ 207 (404)
T PTZ00376 132 PTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF-DGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKR 207 (404)
T ss_pred CCchhHHHHHHHcCCceeeccccCcccCCcCH-HHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 66666 2 24689999 9999998642 0145777778999999999999999999999999
Q ss_pred CCeEEEecccccccccCCC-CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH---
Q 041151 224 ENLVLLGDEVYQQNIYQDE-RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI--- 299 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l--- 299 (463)
|+++||+||+|.++.|++. ..+.++..+. ...+++|+++||||+| ++||+|+||+++..+++++++.+
T Consensus 208 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-------~~~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~ 279 (404)
T PTZ00376 208 KNLIPFFDMAYQGFASGDLDKDAYAIRLFA-------ERGVEFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQ 279 (404)
T ss_pred CCcEEEEehhhcCccCCCHHHHHHHHHHHH-------hcCCcEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHH
Confidence 9999999999999887311 1122333321 1123799999999999 99999999984211688765544
Q ss_pred -Hhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCceeEEe
Q 041151 300 -YKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR---NVVCNFTEGAMYSF 374 (463)
Q Consensus 300 -~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p---g~~~~~~~g~~~~~ 374 (463)
.+... ...+++.+.|.++..++++. ...+.+.++.++++++|+++++.+.+.|++.. ++.+..|+||||+|
T Consensus 280 ~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~ 355 (404)
T PTZ00376 280 LKLIIRPMYSSPPIHGARIADRILSDP----ELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSF 355 (404)
T ss_pred HHHHHhhhcCCCchHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEe
Confidence 33332 23456789999999998631 11234556677788899999999999999862 35566899999999
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHH
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~ 448 (463)
+++. .+++..+++++||.+.|| + ||+++ .+.++++.++++|++++.
T Consensus 356 ~~~~-----------------~~~~~~L~~~~~v~v~p~-------~----Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 356 TGLT-----------------KEQVERLIEKYHIYLLDN-------G----RISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred cCCC-----------------HHHHHHHHHhCCEeecCC-------C----eEEEeccCHHhHHHHHHHHHHHHh
Confidence 5442 356778888889999996 1 99998 888999999999999875
No 64
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.9e-44 Score=359.93 Aligned_cols=362 Identities=14% Similarity=0.119 Sum_probs=267.1
Q ss_pred hhhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHH
Q 041151 13 ENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHY 92 (463)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~ 92 (463)
+++...+.+.++.+...+++.. ..++|||+.|.|.. |.. ..|. .+.+.+++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~~~~------------------~~~-~~p~-----~~~l~~a~~~~ 56 (396)
T PRK09257 3 EHLEAAPADPILGLMEAFRADP--RPDKVNLGVGVYKD------------------EQG-RTPV-----LRAVKKAEARL 56 (396)
T ss_pred ccCCCCCCChHHHHHHHHhhCC--CcCcEecceeeEEC------------------CCC-CEec-----cHHHHHHHHHh
Confidence 4556777888877766554332 24689999997531 000 0011 25666666666
Q ss_pred hhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcE--EEcCCcHHHHHHHHHHHh-cCCCCEEEEc--------
Q 041151 93 LSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELI--FLTDGASKGVMQTLNCVI-RGEGDGVVLL-------- 161 (463)
Q Consensus 93 ~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~-~~~gd~Vlvp-------- 161 (463)
+.. ....+|++..|.++||+++++|+.+.++..+++++| ++|+|+++++..+++++. .+|||+|+++
T Consensus 57 ~~~--~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~ 134 (396)
T PRK09257 57 LET--ETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR 134 (396)
T ss_pred ccc--ccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHH
Confidence 543 244689999999999999999997665666788887 999999999999987663 1799999997
Q ss_pred -----cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -----FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -----~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|+++ + .+++++|+ +.+++.++.. .++..++++++||||||.++|.+++++|+++|++|+++||+
T Consensus 135 ~~~~~~g~~~v~v~~~~~~~~~~d~-~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 210 (396)
T PRK09257 135 AIFEAAGLEVKTYPYYDAATKGLDF-DAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFL 210 (396)
T ss_pred HHHHHcCCcEEEEeccccccCccCH-HHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 66666 3 34689999 9999988742 01345556679999999999999999999999999999999
Q ss_pred cccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhH----HHHHHhhhh-h
Q 041151 231 DEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT----VDEIYKIAS-I 305 (463)
Q Consensus 231 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~----~~~l~~~~~-~ 305 (463)
||+|.++.++.+....++..+. ....++|+++||||+| +++|+|+||+++...+++. +..+.+... .
T Consensus 211 De~Y~~l~~~~~~~~~~~~~~~-------~~~~~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (396)
T PRK09257 211 DIAYQGFGDGLEEDAYGLRAFA-------AAGLELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLKATIRTN 282 (396)
T ss_pred eccccccccchHHHHHHHHHHH-------hcCCcEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 9999998762122233443332 1224799999999999 8999999999732124443 334434333 3
Q ss_pred cccCChHHHHHHHHhcCCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHhhcC-C--CcccccCCceeEEeeeccCCh
Q 041151 306 ALSPNVPAQIFMGLMVNPLKPGDISY-EQFVRESKGILESLRRRARMMTDGFNSC-R--NVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 306 ~~~~~~~~q~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-p--g~~~~~~~g~~~~~~~~~~~~ 381 (463)
..+++.+.|.++..++.+ +.+ ..+.++.+++++.|+++++.+.+.|++. + ++.+..|+||||+|++++
T Consensus 283 ~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~--- 354 (396)
T PRK09257 283 YSNPPAHGAAIVATILND-----PELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT--- 354 (396)
T ss_pred cCCCcHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC---
Confidence 455789999999999864 222 1235566778999999999999999986 2 377888999999995442
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l 447 (463)
.+++..+++++||.+.|. + ||+++ .+++++++++++|++++
T Consensus 355 --------------~~~~~~l~~~~~V~~~p~-------~----ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 355 --------------PEQVDRLREEFGVYAVGS-------G----RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred --------------HHHHHHHHHcCCEEEcCC-------C----eEEEeeCCHHHHHHHHHHHHhhC
Confidence 235677889999999871 2 99998 88899999999998753
No 65
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-43 Score=352.81 Aligned_cols=355 Identities=23% Similarity=0.381 Sum_probs=277.9
Q ss_pred hhhhhhhcc--chhhhhHHHHHHHHHHh--cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHH
Q 041151 11 MNENVKKVQ--YAVRGELYLRASELQKE--GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAI 86 (463)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 86 (463)
+|+.++++. .+.++.+.+.+..+..+ ..++++|+.|+|+. +. |+.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~------------------------~~-----~~~v~ 52 (394)
T PRK06836 2 ISEKIKGLLEKSSWIRKMFEEGARLKAEYGADNVFDFSLGNPSV------------------------PP-----PAAVK 52 (394)
T ss_pred CchHHHHHHhcccHHHHHHHHHHHHHhhcCCCCeEEecCcCCCC------------------------CC-----CHHHH
Confidence 556666654 23455555555555443 34589999999884 33 77888
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----
Q 041151 87 ARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL----- 161 (463)
Q Consensus 87 ~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp----- 161 (463)
+++.+.+.........|++..|++++|++++++++..++..+++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 53 ~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vli~~p~~~ 131 (394)
T PRK06836 53 EALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAIL-NPGDEVIVFAPYFV 131 (394)
T ss_pred HHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCc
Confidence 88877765432235789999999999999999999888988999999999999999999999997 899999997
Q ss_pred --------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh-----
Q 041151 162 --------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ----- 223 (463)
Q Consensus 162 --------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~----- 223 (463)
.|.++ ..+.+++|+ +.+++.+++ ++++|++++||||||.+++.+++++|+++|++
T Consensus 132 ~~~~~~~~~g~~v~~v~~~~~~~~~d~-~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~ 204 (394)
T PRK06836 132 EYRFYVDNHGGKLVVVPTDTDTFQPDL-DALEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEY 204 (394)
T ss_pred cHHHHHHHcCCEEEEEecCCccCcCCH-HHHHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhcc
Confidence 56665 223368999 999999976 89999999999999999999999999999999
Q ss_pred -CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH----
Q 041151 224 -ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE---- 298 (463)
Q Consensus 224 -~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~---- 298 (463)
|+++||+||+|.++.|+ +....++.. ..+++|+++||||.| |+||+|+||++ +++++.+.
T Consensus 205 ~~~~~ii~De~y~~~~~~-~~~~~~~~~----------~~~~~i~~~S~SK~~-~~pGlRiG~~~---~~~~~~~~~~~~ 269 (394)
T PRK06836 205 GRPIYLISDEPYREIVYD-GAEVPYIFK----------YYDNSIVVYSFSKSL-SLPGERIGYIA---VNPEMEDADDLV 269 (394)
T ss_pred CCCeEEEEeccccccccC-CCCCCChHH----------ccCcEEEEecchhhc-cCcceeeEEEe---cCHHHhhhHHHH
Confidence 89999999999998873 333333322 123789999999999 89999999999 46655332
Q ss_pred --HHhhhh--hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEe
Q 041151 299 --IYKIAS--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSF 374 (463)
Q Consensus 299 --l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~ 374 (463)
+..... ...+++.+.|.++..++.+. ..++.|+++++.+.+.|+++ |+.+..|+|+||+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---------------~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~ 333 (394)
T PRK06836 270 AALVFANRILGFVNAPALMQRVVAKCLDAT---------------VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLF 333 (394)
T ss_pred HHHHHHhhccccccCCHHHHHHHHHHhCCh---------------HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEE
Confidence 111121 12467888999999888521 12456888899999999988 88888999999999
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
++++ .. ++.+++ ..|.++||.+.||+.|+. .+++||+++.+++++++++++|+++++++
T Consensus 334 ~~~~--~~-----------~~~~~~-~~l~~~gv~v~~g~~f~~---~~~iRi~~~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 334 PKSP--EE-----------DDVAFC-EKAKKHNLLLVPGSGFGC---PGYFRLSYCVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred EeCC--CC-----------CHHHHH-HHHHhCCEEEECchhcCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 6543 21 245554 667888999999999974 24899999988899999999999988654
No 66
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.9e-43 Score=354.99 Aligned_cols=351 Identities=21% Similarity=0.272 Sum_probs=263.0
Q ss_pred hhhhccc-hhhhhHHHHHHHHHHh--cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 14 NVKKVQY-AVRGELYLRASELQKE--GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 14 ~~~~~~~-~~~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
.+.++.+ +.+..+...+++.... ++++++|+.|+|.. +. |+.+.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~v~~~~~ 56 (402)
T TIGR03542 6 HFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQ------------------------PL-----PASVIEAFH 56 (402)
T ss_pred CccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCC------------------------CC-----CHHHHHHHH
Confidence 3444444 4555666666666643 57899999999885 33 778888888
Q ss_pred HHhhhcC--CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 91 HYLSLTS--GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 91 ~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
+.+.+.. .....|++..|.++||+++|+++.+. .+++++|++|+|+++++..++ .++ .+||.|+++
T Consensus 57 ~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~Ga~~al~~l~-~l~-~~gd~Vlv~~P~y~~~ 131 (402)
T TIGR03542 57 NAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDGAKCDVFRLQ-SLF-GSDNTVAVQDPVYPAY 131 (402)
T ss_pred HHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCCcHHHHHHHH-Hhc-CCCCEEEEeCCCCcch
Confidence 7776521 12457988899999999999986321 278999999999999999864 555 799999997
Q ss_pred ------cCc-----------ee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHH
Q 041151 162 ------FHT-----------TW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREIL 218 (463)
Q Consensus 162 ------~g~-----------~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~ 218 (463)
.|. ++ + ..++.+|+ +. .. ++++|++||||||||.++|.+++++|+
T Consensus 132 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~-----~~------~~~~i~l~nP~NPTG~~~s~~~~~~l~ 199 (402)
T TIGR03542 132 VDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDL-PE-----EP------KIDIIYLCSPNNPTGTVLTKEQLKELV 199 (402)
T ss_pred HHHHHHcCCccccccccccceEEEeecchhhCCCCCc-cc-----cC------CceEEEEeCCCCCCCccCCHHHHHHHH
Confidence 555 44 1 12343443 21 02 689999999999999999999999999
Q ss_pred HHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC-CceEEEEecCCcccCCCCCceeEEEEecCCChhHH-
Q 041151 219 RFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK-EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV- 296 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~- 296 (463)
++|++++++||+||+|.++.+ ++..+.++..+ +. .+++|+++||||.| |+||+|+||++ ++++++
T Consensus 200 ~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~--------~~~~~~vi~~~SfSK~~-g~pGlRiG~~i---~~~~l~~ 266 (402)
T TIGR03542 200 DYANEHGSLILFDAAYSAFIS-DPSLPHSIFEI--------PGAKECAIEFRSFSKTA-GFTGVRLGWTV---VPKELTY 266 (402)
T ss_pred HHHHHcCeEEEEEchhhhhcc-CCCCCcchhhC--------CCCcccEEEEecCcccc-CCCCcceEEEE---ecHHHhh
Confidence 999999999999999999877 33323344332 22 24789999999999 99999999999 577776
Q ss_pred -------HHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 041151 297 -------DEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTE 368 (463)
Q Consensus 297 -------~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~ 368 (463)
..+.+.. ....+++.+.|.++..++.+. .+ .+..+.++.|+++++.+.+.|++. |+.+..|.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-----~~----~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~ 336 (402)
T TIGR03542 267 ADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGE-----GL----QPILEAISYYMENARILRKALEAA-GFKVYGGE 336 (402)
T ss_pred cchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCc-----ch----hHHHHHHHHHHHHHHHHHHHHHhc-CceecCCC
Confidence 2222222 223468889999988887532 12 223345678999999999999987 78888888
Q ss_pred ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 369 GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
+++|+|++++ .. .++.++...+++++||.+.||+.|+. .+.+++||+++.+++++++++++|+++
T Consensus 337 ~~~f~~v~l~--~~----------~~~~~l~~~l~~~~gv~v~pg~~f~~-~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 337 HAPYLWVKTP--EG----------ISSWDFFDFLLYQYHVVGTPGSGFGP-SGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred ceeEEEEECC--CC----------CCHHHHHHHHHHhCCEEEeCchhhCC-CCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 9999996654 22 13556777778788999999999975 345799999887789999999999875
No 67
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=4.5e-43 Score=356.43 Aligned_cols=342 Identities=18% Similarity=0.258 Sum_probs=258.0
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH-HHHhhhc--CCCCCccCCCCCCHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA-KHYLSLT--SGGLGAYSDSRGIPGVRK 114 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~-~~~~~~~--~~~~~~Y~~~~g~~~lr~ 114 (463)
+++|+|+.|+|+. .|. |...+..+ .+.+... ......|+++.|.++||+
T Consensus 30 ~~~i~l~~g~p~~-----------------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ 81 (416)
T PRK09440 30 PGAIMLGGGNPAH-----------------------IPE-----MEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIE 81 (416)
T ss_pred CCceeccCCCCCc-----------------------cCC-----HHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHH
Confidence 5689999999983 121 33444444 4444431 123468999999999999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC-----CCCEEEE-c---c----------Cc------ee---
Q 041151 115 EVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG-----EGDGVVL-L---F----------HT------TW--- 166 (463)
Q Consensus 115 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----~gd~Vlv-p---~----------g~------~~--- 166 (463)
+||+|+.+++|+.+++++|++|+|+++++..++.+++ + +||.|++ + + +. .+
T Consensus 82 aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~-~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~ 160 (416)
T PRK09440 82 ALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFA-GRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL 160 (416)
T ss_pred HHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHh-ccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc
Confidence 9999999889999999999999999999999999997 5 5888988 3 1 11 11
Q ss_pred cCC--CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCC
Q 041151 167 KRQ--QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERP 244 (463)
Q Consensus 167 ~~~--~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~ 244 (463)
..+ .+++|+ +.|+ +.. ++++|+++|||||||.++|.+++++|+++|++++++||+||+|..+.. ..
T Consensus 161 ~~~~~~~~~d~-~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~--~~- 228 (416)
T PRK09440 161 PEGQFKYHVDF-EHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP--GI- 228 (416)
T ss_pred cccccccCCCH-HHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC--Cc-
Confidence 122 368899 9987 233 689999999999999999999999999999999999999999975321 11
Q ss_pred ccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCC
Q 041151 245 FVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNP 323 (463)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 323 (463)
......+ ...+++|+++|||| + ++||+|+||++ +++++++.+.+... ...+++.+.|.++..++++
T Consensus 229 --~~~~~~~------~~~~~vI~~~SfSK-~-~~pGlRiG~~i---~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 295 (416)
T PRK09440 229 --IFSEATP------LWNPNIILCMSLSK-L-GLPGVRCGIVI---ADEEIIEALSNMNGIISLAPGRLGPAIAAEMIES 295 (416)
T ss_pred --chhhcCc------cccCCeEEEecccc-c-CCCcceEEEEe---CCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhcc
Confidence 1111111 11347999999999 5 78999999999 69999999988876 5678899999999999974
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C--CcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHH
Q 041151 324 LKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-R--NVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCL 400 (463)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-p--g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (463)
. .+..+.. +.+++.|+++++.+.+.|.+. + ++.+..|+|++|+|++++-. . .++.++.
T Consensus 296 ~-----~~~~~~~--~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~-~----------~~~~~~~- 356 (416)
T PRK09440 296 G-----DLLRLSE--TVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDL-P----------ITTEELY- 356 (416)
T ss_pred c-----hHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCC-C----------CCHHHHH-
Confidence 3 2332222 235778888888888888763 3 35667899999999765410 1 1244554
Q ss_pred HHHHhcCeEeeCCCCCCCCC------CCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 401 RLLEATGISTVPGSGFGQKE------GIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 401 ~ll~~~gI~v~pg~~f~~~~------~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
..++++||.+.||+.|+... +.+++|||++.+++++++++++|++++++..+
T Consensus 357 ~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 357 QRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred HHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 45678999999999985321 13589999987789999999999999987654
No 68
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.6e-43 Score=360.48 Aligned_cols=328 Identities=18% Similarity=0.284 Sum_probs=240.7
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHH-HHHHhcCCC-CCCC--cEEEcCCcHHHHHHHHHH-----HhcC
Q 041151 83 ADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAE-FIERRDGYP-SDPE--LIFLTDGASKGVMQTLNC-----VIRG 153 (463)
Q Consensus 83 ~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~-~~~~~~g~~-~~~~--~i~~t~G~~~al~~~~~~-----l~~~ 153 (463)
+..+.++.+.+.. ..|+++.|..++++++++ |+.+.++.. .+++ +|++|+|+++++..++.+ ++ +
T Consensus 109 ~~~~~~~~~~~~~-----~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll-~ 182 (521)
T TIGR03801 109 DAFLYEMCDGIIG-----DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL-K 182 (521)
T ss_pred CHHHHHHHHHhhc-----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC-C
Confidence 3555666665533 259877888888888885 665554443 3444 899999999999999987 56 8
Q ss_pred CCCEEEEc---------------cCcee------cCCC-----cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc
Q 041151 154 EGDGVVLL---------------FHTTW------KRQQ-----IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ 207 (463)
Q Consensus 154 ~gd~Vlvp---------------~g~~~------~~~~-----~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~ 207 (463)
|||+|+++ +|.++ .... |.+|. +++++++.+ ++|+|+++|||||||.
T Consensus 183 pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~-~~l~~~~~~------~~kai~l~nP~NPTG~ 255 (521)
T TIGR03801 183 KGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPD-KELEKLRDP------SIKALFVVNPSNPPSV 255 (521)
T ss_pred CCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCH-HHHHHhcCC------CCcEEEEeCCCCCCCC
Confidence 99999997 35554 1222 88999 999987765 8999999999999999
Q ss_pred CCCHHHHHHHHHHhhhC--CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEE
Q 041151 208 CLSEANLREILRFCYQE--NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGY 285 (463)
Q Consensus 208 ~~s~~~l~~l~~~a~~~--~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~ 285 (463)
++|.+++++|+++|++| +++||+||+|..+.+ .+.++... . .+++|+++||||+| |++|||+||
T Consensus 256 vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~sl~~~--------~-~~~vI~v~SfSK~f-g~~G~RlG~ 321 (521)
T TIGR03801 256 AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD----DFRSLFAE--------L-PYNTIGVYSFSKYF-GATGWRLGT 321 (521)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc----cccchhhh--------C-CCCEEEEEcchhhc-cCchhhhhh
Confidence 99999999999999986 999999999998754 23354432 1 13799999999999 999999999
Q ss_pred EEecCCChh-----HH--------HHH------------------------Hhhhh-hcccCChHHHH--H---HHHhcC
Q 041151 286 FEMTNIPPK-----TV--------DEI------------------------YKIAS-IALSPNVPAQI--F---MGLMVN 322 (463)
Q Consensus 286 ~~~~~~~~~-----~~--------~~l------------------------~~~~~-~~~~~~~~~q~--~---~~~~l~ 322 (463)
++. +++ ++ +.+ +++.. .+.+.+.+.|. + +.+++.
T Consensus 322 i~~---~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~ 398 (521)
T TIGR03801 322 IAL---HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD 398 (521)
T ss_pred hhc---CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence 994 543 22 112 22333 45667788776 2 334443
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh----cCCCChHHH
Q 041151 323 PLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR----AGKVPDVFY 398 (463)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 398 (463)
.. ....+.+++.+++|++.+.+.| .+ .+...+|+|+||+|+++..-....+..++ ....++.++
T Consensus 399 ~~----------~~y~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~ 466 (521)
T TIGR03801 399 KE----------NAYKAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV 466 (521)
T ss_pred cc----------hhHHHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence 11 1234457788999999999998 22 23345789999999887521100000000 001246889
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 399 CLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 399 ~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
+.++++++||.+.||..|+.+ ++++|||++ .+++++.++.++|++++.++.++|
T Consensus 467 ~~~L~~e~gV~v~PG~~Fg~~--~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~~~ 521 (521)
T TIGR03801 467 LFRLAEETGIVLLPGGGFGGP--EWSVRVSLANLNEYDYAEIGRAIRKILDEYYEAW 521 (521)
T ss_pred HHHHHHhCCEEEeCchhcCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999963 458999999 788999999999999998888775
No 69
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.7e-43 Score=347.69 Aligned_cols=320 Identities=14% Similarity=0.170 Sum_probs=254.1
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
.++++|+|+.|++++ +. |+.+++++.+.+... ..|+ ..|.++||++
T Consensus 27 ~~~~~i~l~~nen~~------------------------~~-----~~~v~~a~~~~~~~~----~~Yp-~~g~~~Lr~a 72 (366)
T PRK01533 27 GDHSFVKLASNENPF------------------------GC-----SPRVLDELQKSWLDH----ALYP-DGGATTLRQT 72 (366)
T ss_pred CCCceEEeCCCCCCC------------------------CC-----CHHHHHHHHHHHHhc----CcCC-CCCHHHHHHH
Confidence 356799999999886 44 888999988766542 3465 5689999999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cCCCcccChHHHH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KRQQIGVLIINDL 179 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~~~~~~d~~~~l 179 (463)
+|++++ +++++|++|+|+++++..++.+++ ++||.|+++ .|.++ +.+++++|+ +.|
T Consensus 73 ia~~~~------~~~~~I~vt~Gs~e~i~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~-~~l 144 (366)
T PRK01533 73 IANKLH------VKMEQVLCGSGLDEVIQIISRAVL-KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDL-DEI 144 (366)
T ss_pred HHHHhC------CCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCH-HHH
Confidence 999985 789999999999999999999998 899999996 67666 445678999 999
Q ss_pred HHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCC
Q 041151 180 QQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPF 259 (463)
Q Consensus 180 ~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (463)
++++++ ++++|++||||||||.+++.+++++|+++|++++ ++|+||+|.++.+. +. ..+.... +
T Consensus 145 ~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~-~~-~~~~~~~---~---- 208 (366)
T PRK01533 145 SSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTA-KD-FPETLPL---L---- 208 (366)
T ss_pred HHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc-cc-CcchhHH---h----
Confidence 998876 7899999999999999999999999999998876 56779999987662 21 1222222 2
Q ss_pred CCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHH
Q 041151 260 SKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESK 339 (463)
Q Consensus 260 ~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (463)
+..+++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..+|++ ..+.+
T Consensus 209 ~~~~~vi~~~SfSK~~-~l~GlRiG~~i---~~~~~~~~l~~~~~-~~~~~~~~q~aa~~~l~~-----------~~~~~ 272 (366)
T PRK01533 209 EKHKNILVLRTFSKAY-GLASFRVGYAV---GHEELIEKLNVVRL-PFNVSSLAQKAATIAFGD-----------DEFIE 272 (366)
T ss_pred ccCCCEEEEeCchHHh-cChHHHHhHHh---CCHHHHHHHHHhcC-CCCcCHHHHHHHHHHhCC-----------HHHHH
Confidence 3445899999999999 99999999999 68999999988775 688999999999999863 12233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 340 GILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 340 ~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
..++.++++++.+.+.++.+ |+.+.+++|+ |+|+++ +. ...+ ...|.++||.|++ |.
T Consensus 273 ~~~~~~~~~r~~~~~~l~~~-g~~~~~~~~n-f~~~~~--~~-------------~~~~-~~~l~~~GI~Vr~---~~-- 329 (366)
T PRK01533 273 EIVRVNTEGLRQYESFCKEN-EIPFYQSQTN-FIFLPV--EN-------------GGEI-YEACAHAGFIIRP---FP-- 329 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCccCCCcCc-EEEEeC--CC-------------HHHH-HHHHHHCCcEEcc---CC--
Confidence 45566777788888888877 8888877655 677544 32 2333 4556689999998 41
Q ss_pred CCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHHhcc
Q 041151 420 EGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQYED 456 (463)
Q Consensus 420 ~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~~~~ 456 (463)
+++||+++.. +++++++++|+++++..+.+-+|
T Consensus 330 ---~~iRis~~~~-~~~~~l~~al~~~~~~~~~~~~~ 362 (366)
T PRK01533 330 ---NGVRITVGTR-EQNEGVISVLQQHFENKKRKSRD 362 (366)
T ss_pred ---CceEEeCCCH-HHHHHHHHHHHHHHHhccccccc
Confidence 3799999976 79999999999988877655443
No 70
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=4.1e-42 Score=369.98 Aligned_cols=388 Identities=14% Similarity=0.192 Sum_probs=282.7
Q ss_pred CChhhhhhhhhhccchhhhhHHHHHHHHHH-hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHH
Q 041151 6 LDYESMNENVKKVQYAVRGELYLRASELQK-EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPAD 84 (463)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 84 (463)
++-+.-+..+.+.+.+.+..+......... ++.++|+|+.|+|++ |. |+.
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~vI~LsinE~d~------------------------pp-----Pp~ 714 (1082)
T PLN02672 664 LPEEEESSKFIGFSSSARSALKEAELSVSGSQESSLIHMDVDESFL------------------------PV-----PSA 714 (1082)
T ss_pred cchhhhhHhhhCCCchhHHHHHhcccCCcccCCCCEEEEeCCCCCC------------------------CC-----CHH
Confidence 333444556667777766666443333333 367899999999996 54 889
Q ss_pred HHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--
Q 041151 85 AIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-- 161 (463)
Q Consensus 85 ~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-- 161 (463)
+++++.+++... .+ ..|++++|+++++|+.+++|+++++ ++|++|+|+++++..++.+++ +|||.|++|
T Consensus 715 V~eAi~eal~~~-----~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl-~pGD~VLVp~P 786 (1082)
T PLN02672 715 VKASIFESFVRQ-----NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV-QEGGTLCFPAG 786 (1082)
T ss_pred HHHHHHHHHhhc-----CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCC
Confidence 999998877541 22 3456889999999999999998865 599999999999999999998 999999997
Q ss_pred -----------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCC-CCCccCCCHHHHHHHHHHhhh
Q 041151 162 -----------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPG-NPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 -----------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~-NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|+++ .+++|.+|+ +.|++++++. +.++|++|||| ||||.++|.+++++|+++|++
T Consensus 787 tY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~-d~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k 860 (1082)
T PLN02672 787 SNGTYVSAAKFLKANFRRIPTKSSDGFKLTA-KTLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEILSVCAK 860 (1082)
T ss_pred ChHHHHHHHHHcCCEEEEEecccccCCCCCH-HHHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHH
Confidence 66666 245799999 9999998651 34689999997 999999999999999999999
Q ss_pred CCeEEEecccccccccCCCC-CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh
Q 041151 224 ENLVLLGDEVYQQNIYQDER-PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI 302 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 302 (463)
||++||+||+|+++.|++.. ...++......+.. ..+..++|+++||||.| ++||+|+||++. .++++++.+.+.
T Consensus 861 ~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~-~sks~nVIvL~SfSKkf-~lpGLRIGylIa--p~~eLi~~l~~~ 936 (1082)
T PLN02672 861 YGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKS-SNPSFAVALLGGLSTEL-LSGGHEFGFLAL--NDSVLIDAFHSA 936 (1082)
T ss_pred cCCEEEEeCCCCccccCCCCCcccchhhHHHHhcc-ccCCceEEEEeCcHHhh-ccHHHHheeEEe--CCHHHHHHHHHh
Confidence 99999999999999884321 11122222112200 01124799999999999 999999999994 245589999876
Q ss_pred hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC-Ch
Q 041151 303 ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL-PP 381 (463)
Q Consensus 303 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~-~~ 381 (463)
.. ...+..+.|.++.+++.......+ .+..+..+.++.|+++++.+.+.|+++ |+.+.+|+|+||+|+++.- ..
T Consensus 937 ~~-~s~~~~~~q~Aaaaalall~~~~~---~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~~l~ 1011 (1082)
T PLN02672 937 PG-LSRPHSTLKYTIKKLLGLKNQKSS---DLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSAYLG 1011 (1082)
T ss_pred hh-hcCCCcHHHHHHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEcccccc
Confidence 54 223334456555544420000011 234456678889999999999999998 8999999999999976531 00
Q ss_pred hhHHHHhh---cC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 382 KAIEAAKR---AG-KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 382 ~~~~~~~~---~~-~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
...+.... .+ ..++.+++..+++++||.+.||+.|+. .+|+||+++.+++++++++++|+++.+
T Consensus 1012 ~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~---~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1012 KTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI---PGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC---CCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 00000000 00 124677888888888999999998875 349999999888899999999998653
No 71
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.2e-41 Score=345.29 Aligned_cols=359 Identities=13% Similarity=0.116 Sum_probs=257.0
Q ss_pred hhhhhhhhccchhhhhHHHHHHHHHHhcccceeccCCC-CcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHH
Q 041151 10 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGN-PHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIAR 88 (463)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a 88 (463)
++..++.+.+.+.|+.+...+++. ....+++|+.|. |+. +. ++.+.++
T Consensus 22 ~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~l~l~~g~~p~~------------------------~~-----~p~~~~~ 70 (423)
T PLN02397 22 SRFEHVEPAPPDPILGVTEAFLAD--PSPVKLNLGVGAYRTE------------------------EG-----KPVVLNV 70 (423)
T ss_pred hHHHcCCcCCCChHHHHHHHHhhC--CCcceEecccceeeCC------------------------CC-----CcccchH
Confidence 345566777888887766655433 244578888885 563 11 2223333
Q ss_pred HHHH----hhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcE-----EEcCCcHHHHHHHHHHHhcCCCCEEE
Q 041151 89 AKHY----LSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELI-----FLTDGASKGVMQTLNCVIRGEGDGVV 159 (463)
Q Consensus 89 ~~~~----~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i-----~~t~G~~~al~~~~~~l~~~~gd~Vl 159 (463)
+.++ +.. ....+|+++.|.++||+++++|+.+.++...++++| +.++|+. .+...+..++ +|||+|+
T Consensus 71 ~~~a~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~-~l~~~~~~~~-~pGd~Vl 146 (423)
T PLN02397 71 VRKAEQRLLAG--SRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSL-RLGAEFLARF-YPGSTIY 146 (423)
T ss_pred HHHHHHHhhcc--CCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHH-HHHHHHHHHh-CCCCEEE
Confidence 3332 322 345689999999999999999996554433344443 3344433 3445555555 7999999
Q ss_pred Ec-------------cCcee---c---CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 160 LL-------------FHTTW---K---RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 160 vp-------------~g~~~---~---~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
++ .|+++ + .+++++|+ +.+++.+... .+++++|++++||||||.+++.+++++|+++
T Consensus 147 v~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~-~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~ 222 (423)
T PLN02397 147 IPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF-DGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDL 222 (423)
T ss_pred EeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH-HHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 97 67666 2 23589999 9999887642 1157888888999999999999999999999
Q ss_pred hhhCCeEEEecccccccccCCC-CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH-
Q 041151 221 CYQENLVLLGDEVYQQNIYQDE-RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE- 298 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~- 298 (463)
|++|+++||+||+|.++.|++. .+..++..+. ....++|+++||||+| +++|||+||+++..+++++++.
T Consensus 223 a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~-------~~~~~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~ 294 (423)
T PLN02397 223 IKSKNHLPFFDSAYQGFASGDLDADAQSVRMFV-------EDGHEILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRV 294 (423)
T ss_pred HHhCCcEEEEecccCCccCCchhhhhHHHHHHH-------hcCCcEEEEEECcccC-CCccccceEEEEEeCCHHHHHHH
Confidence 9999999999999999988321 1223333321 1123699999999999 9999999998521146665544
Q ss_pred ---HHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----cccccCCce
Q 041151 299 ---IYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRN----VVCNFTEGA 370 (463)
Q Consensus 299 ---l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg----~~~~~~~g~ 370 (463)
+.+... ..++++.+.|.++..+|++. ...+.+.++.+++++.|+++++.+.+.|+++ | +.+..|+|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~----~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg 369 (423)
T PLN02397 295 KSQLKLIARPMYSNPPIHGASIVATILGDP----ELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIG 369 (423)
T ss_pred HHHHHHHHhcccCCCcHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCce
Confidence 334443 34567889999999888631 1123444556788999999999999999988 5 777889999
Q ss_pred eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHH
Q 041151 371 MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~ 448 (463)
||+|++++ .+++..+++++||.+.+ .+ ||+++ .+.+++++++++|++++.
T Consensus 370 ~fl~~~l~-----------------~~~~~~Ll~~~~V~v~~-------~~----Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 370 MFSFTGLN-----------------KEQVDRMTKEYHIYMTR-------DG----RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEEecCCC-----------------HHHHHHHHHhCCEEECC-------CC----eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 99996543 34788999999999963 22 99998 899999999999999974
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-42 Score=341.59 Aligned_cols=323 Identities=14% Similarity=0.207 Sum_probs=253.0
Q ss_pred hhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCc
Q 041151 23 RGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGA 102 (463)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~ 102 (463)
...+...++++..++.++++|+.|.++. +. |+.+.+++.+.+.. ...
T Consensus 15 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~----~~~ 61 (357)
T PRK14809 15 GRGIEEVARELGLDPDDLVKLSSNENPH------------------------GP-----SPAAVEAIREAAER----VHS 61 (357)
T ss_pred CCCHHHHHHHhCCCccceeEecCCCCCC------------------------CC-----CHHHHHHHHHHHhh----hhc
Confidence 3345555666655677899999998775 33 77788888776543 367
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---
Q 041151 103 YSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW--- 166 (463)
Q Consensus 103 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~--- 166 (463)
|++ .|.++||+++|++++ +++++|++|+|+++++..++.+++ +|||.|+++ .|..+
T Consensus 62 Y~~-~~~~~lr~~ia~~~~------~~~~~I~it~G~~~al~~~~~~~~-~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~ 133 (357)
T PRK14809 62 YPK-ASHADLTAALADRWD------VSPEQVWLANGGDGALDYLARAML-DPGDTVLVPDPGFAYYGMSARYHHGEVREY 133 (357)
T ss_pred CCC-CCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEE
Confidence 875 688999999999985 889999999999999999999998 999999997 44444
Q ss_pred ---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCC
Q 041151 167 ---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDER 243 (463)
Q Consensus 167 ---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~ 243 (463)
.++++.+|. +.+++.. + ++|+|++||||||||.++|.+++++|+++|++ +++||+||+|.++.+ ..
T Consensus 134 ~l~~~~~~~~~~-~~~~~~~-~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~-~~- 202 (357)
T PRK14809 134 PVSKADDFEQTA-DTVLDAY-D------GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAE-RP- 202 (357)
T ss_pred ecccCcCCCcCH-HHHHHhh-c------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccC-Cc-
Confidence 234677787 8877754 2 58999999999999999999999999999875 789999999999865 21
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCC
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNP 323 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~ 323 (463)
+..... ...+++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..++.+
T Consensus 203 ---~~~~~~-------~~~~~vi~~~SfSK~~-~~~GlRiG~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~ 267 (357)
T PRK14809 203 ---SAVALV-------EERDDVAVLRTFSKAY-GLAGLRLGYAV---VPEEWADAYARVNT-PFAASELACRAGLAALDD 267 (357)
T ss_pred ---hhHHHH-------hhCCCEEEEecchhHh-cCcchhheeee---cCHHHHHHHHHhCC-CCCCCHHHHHHHHHHhCC
Confidence 211211 2234799999999999 99999999999 68899999988765 677889999999888752
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHH
Q 041151 324 LKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLL 403 (463)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 403 (463)
..+.++.++.++++++.+.+.|... + .+.+++|+|+++. ++.+++ ..|
T Consensus 268 -----------~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~---------------~~~~~~-~~l 315 (357)
T PRK14809 268 -----------DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEVG---------------DASAVA-EAA 315 (357)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC---------------CHHHHH-HHH
Confidence 2334556778889999999988653 2 2467788896542 134555 446
Q ss_pred HhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 404 EATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 404 ~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
+++||.|.||+.|+.+ +++||+++. .+++++++++|+++++
T Consensus 316 ~~~gv~v~~g~~f~~~---~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 316 QERGVIVRDCTSFGLP---ECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred HHCCEEEEECccCCCC---CeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 7889999999999752 489999985 4799999999988764
No 73
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-42 Score=341.88 Aligned_cols=323 Identities=16% Similarity=0.209 Sum_probs=248.8
Q ss_pred cceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHH
Q 041151 39 KIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAE 118 (463)
Q Consensus 39 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 118 (463)
.+++|+.|.|.+ +. |+.+++++.+++... .....|++ .|.++||++||+
T Consensus 29 ~~~~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~~-~~~~~Y~~-~G~~~Lr~aia~ 77 (374)
T PRK02610 29 QLDRLDTNEFPY------------------------DL-----PPDLKQKLAWLYQQG-IESNRYPD-GGHEALKQAIAE 77 (374)
T ss_pred ceeEecCCCCCC------------------------CC-----CHHHHHHHHHHHhhc-ccccCCCC-CchHHHHHHHHH
Confidence 479999999885 44 888999988876641 12357865 699999999999
Q ss_pred HHHHhc--CCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC-EEEEc-------------cCcee---c--CCCcccChHH
Q 041151 119 FIERRD--GYPSDPELIFLTDGASKGVMQTLNCVIRGEGD-GVVLL-------------FHTTW---K--RQQIGVLIIN 177 (463)
Q Consensus 119 ~~~~~~--g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd-~Vlvp-------------~g~~~---~--~~~~~~d~~~ 177 (463)
|+++++ |+.+++++|++|+|+++++..++.+++ .+|| .|+++ .|.++ + .+++++|+ +
T Consensus 78 ~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~-~ 155 (374)
T PRK02610 78 YVNESAAGSSQITPANISVGNGSDELIRSLLIATC-LGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDL-A 155 (374)
T ss_pred HhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCH-H
Confidence 998776 577899999999999999998888887 7886 78887 66666 2 33589999 9
Q ss_pred HHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCC
Q 041151 178 DLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGL 257 (463)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 257 (463)
.|+++++... ..++|+|++||||||||.++|.+++++|+++| ++++||+||+|.++.+ . ..+..+
T Consensus 156 ~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~-~----~~~~~~------ 220 (374)
T PRK02610 156 AAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQ-T----TLVGEL------ 220 (374)
T ss_pred HHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCc-c----chHHHH------
Confidence 9999886410 01799999999999999999999999999876 4999999999998743 1 122222
Q ss_pred CCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHH
Q 041151 258 PFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE 337 (463)
Q Consensus 258 ~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 337 (463)
....++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..++.. .+.+.+
T Consensus 221 --~~~~~~ivi~SfSK~~-g~~GlRiG~~v---~~~~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~-------~~~~~~- 285 (374)
T PRK02610 221 --AQHPNWVILRTFSKAF-RLAAHRVGYAI---GHPELIAVLEKVRL-PYNLPSFSQLAAQLALEH-------RQELLA- 285 (374)
T ss_pred --hcCCCEEEEEecchhc-cCcccceeeee---cCHHHHHHHHHhcC-CCCCCHHHHHHHHHHhcC-------HHHHHH-
Confidence 3334689999999999 99999999999 69999999988774 567899999999988852 222333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 041151 338 SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
.++..++ +++.+.+.|+.++++.+ .|++++|+|++++ ... ++.+++ ..|.++||.|.++
T Consensus 286 --~~~~~~~-~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~--~~~----------~~~~~~-~~l~~~gi~v~~~---- 344 (374)
T PRK02610 286 --AIPEILQ-ERDRLYQALQELPQLRV-WPSAANFLYLRLS--QDA----------ALAALH-QALKAQGTLVRHT---- 344 (374)
T ss_pred --HHHHHHH-HHHHHHHHHHhCCCcEe-CCCcceEEEEeCC--CCC----------CHHHHH-HHHHHCCEEEEeC----
Confidence 3444444 46778888888878765 4788899996553 221 244544 4568899999763
Q ss_pred CCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 418 QKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 418 ~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+++||+++.+ +++++++++|+++++++
T Consensus 345 ----~~~lRls~~~~-~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 345 ----GGGLRITIGTP-EENQRTLERLQAALTQL 372 (374)
T ss_pred ----CCeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence 23799999964 67899999999888654
No 74
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.9e-42 Score=345.83 Aligned_cols=339 Identities=25% Similarity=0.401 Sum_probs=272.6
Q ss_pred cceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHH-HhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 39 KIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKH-YLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 39 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~-~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
++|||+.|++...... |. ++++++++.+ .... .....|+++.|.++||+++|
T Consensus 2 ~~I~l~~~~~~~~~~~--------------------~~-----~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia 54 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN--------------------PP-----PPAAIKAAIRGAATS--SSFLGYPPPQGYPELREAIA 54 (363)
T ss_dssp TEEESSSSSTSSTTSS--------------------HH-----HHHHHHHHHHHHHHH--TGCTSSTCTTHHHHHHHHHH
T ss_pred CEEEEECCCCCCcccc--------------------cc-----hHHHHHHHHHHhhcc--cccccCCCchhhHHHHHHHH
Confidence 5899999998851110 11 5666666665 2222 36789999999999999999
Q ss_pred HHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHH-hcCCCCEEEEc-------------cCcee------cCCCcccChH
Q 041151 118 EFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCV-IRGEGDGVVLL-------------FHTTW------KRQQIGVLII 176 (463)
Q Consensus 118 ~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l-~~~~gd~Vlvp-------------~g~~~------~~~~~~~d~~ 176 (463)
+|+++.+|++++++ +|++|+|+.+++..++..+ . ++|++|+++ .|.++ ...++.+|+
T Consensus 55 ~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~- 132 (363)
T PF00155_consen 55 DFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDP- 132 (363)
T ss_dssp HHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETH-
T ss_pred HHhhhccCcccccceEEEEecccccchhhhhhcccc-cccccceecCCccccccccccccCceeeeccccccccccccc-
Confidence 99998899999999 9999999999999999998 6 799999997 56655 346899999
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
++|++.+++...++.++++|++++||||||.+++.+++++|+++|++++++||+||+|.++.++ .....+. ...+
T Consensus 133 ~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~---~~~~- 207 (363)
T PF00155_consen 133 EALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFG-DPDFGPI---RSLL- 207 (363)
T ss_dssp HHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSS-SSHTHHH---HGHH-
T ss_pred cccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccC-CCccCcc---cccc-
Confidence 9999999874433324789999999999999999999999999999999999999999999883 2222221 1222
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVR 336 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 336 (463)
+...++|+++|+||+| |++|+|+||+++ ++++++.+.+... .+..+.+.|.++..++.+ .....+
T Consensus 208 ---~~~~~vi~~~S~SK~~-g~~GlRvG~i~~---~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~-------~~~~~~ 272 (363)
T PF00155_consen 208 ---DEDDNVIVVGSLSKSF-GLPGLRVGYIVA---PPELIERLRRFQR-SGLSSSPMQAAAAAALSD-------PELVEK 272 (363)
T ss_dssp ---TTTSTEEEEEESTTTT-TSGGGTEEEEEE---EHHHHHHHHHHHH-HTTSSHHHHHHHHHHHHH-------HHHHHH
T ss_pred ---cccccceeeeeccccc-cccccccccccc---hhhhhhhhhhccc-cccccchhhHHHHHhhhc-------cccccc
Confidence 4444699999999999 999999999994 8899999988876 333388888888888742 222334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCC
Q 041151 337 ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f 416 (463)
+.+++++.|+++++.+.+.|++. |+.+..+++++|+|+.++.. ++.+++.++++++||.+.||..|
T Consensus 273 ~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~L~~~~gi~v~pg~~~ 338 (363)
T PF00155_consen 273 WLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN-------------DAEELAQELLEEYGILVRPGSYF 338 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH-------------HHHHHHHHHHHHHTEEEEEGGGG
T ss_pred ccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc-------------hHHHHHHHHHHhCCEEEEecCCC
Confidence 77889999999999999999998 99999999999999766511 24677778777779999999999
Q ss_pred CCCCCCcEEEEEec-CCcCcHHHHHHHH
Q 041151 417 GQKEGIFHLRTTIL-PAEEDMPAIMESF 443 (463)
Q Consensus 417 ~~~~~~~~lRis~~-~~~e~i~~~~~~l 443 (463)
+. .+++||+++ .+++++++++++|
T Consensus 339 ~~---~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 339 GV---PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp TS---TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred CC---CCEEEEEeccCCHHHHHHHHhhC
Confidence 87 449999995 8999999999986
No 75
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-41 Score=337.70 Aligned_cols=318 Identities=17% Similarity=0.235 Sum_probs=246.8
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
...+++||+.|.|.. +. |+.+++++.+.+.. ...|++. +.++||++
T Consensus 17 ~~~~~~~l~~~~~~~------------------------~~-----p~~~~~a~~~~~~~----~~~Y~~~-~~~~lr~~ 62 (354)
T PRK06358 17 TKNMILDFSANINPL------------------------GV-----PESLKQAITENLDK----LVEYPDP-DYLELRKR 62 (354)
T ss_pred CccceEEecCCCCCC------------------------CC-----CHHHHHHHHHHHHh----hhcCCCc-cHHHHHHH
Confidence 344589999997664 22 78888888876643 4678765 68999999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c---CCCcccChH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K---RQQIGVLII 176 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~---~~~~~~d~~ 176 (463)
+|+|++ +++++|++|+|+++++..++.++ .+ +.|+++ .|.++ + ..++.+|.
T Consensus 63 ia~~~~------~~~~~i~it~Ga~~~l~~~~~~~--~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~- 132 (354)
T PRK06358 63 IASFEQ------LDLENVILGNGATELIFNIVKVT--KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANE- 132 (354)
T ss_pred HHHHhC------CChhhEEECCCHHHHHHHHHHHh--CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccH-
Confidence 999985 89999999999999999999986 45 456675 56555 2 33466774
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.++ .+.+ ++++|++++||||||.+++.+++++|+++|++++++||+||+|.++.++ +.+ .+.... +
T Consensus 133 ~~~~-~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~-~~~-~~~~~~---~- 199 (354)
T PRK06358 133 IVLE-EIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE-NET-ISMINY---L- 199 (354)
T ss_pred HHHH-hhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC-ccc-hhHHHh---c-
Confidence 4444 3443 6899999999999999999999999999999999999999999998873 332 232222 2
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVR 336 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 336 (463)
+...++|+++||||+| |+||+|+||+++ .++++++.+.+... .++++.+.|.++..++.+ ..
T Consensus 200 ---~~~~~vi~~~S~SK~~-gl~G~RiG~lv~--~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~-----------~~ 261 (354)
T PRK06358 200 ---ENFKNLIIIRAFTKFF-AIPGLRLGYGLT--SNKNLAEKLLQMRE-PWSINTFADLAGQTLLDD-----------KE 261 (354)
T ss_pred ---cCCCCEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHHhCC-CCcchHHHHHHHHHHhcc-----------HH
Confidence 4445899999999999 999999999984 35678889988776 678899999999999852 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCC
Q 041151 337 ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f 416 (463)
+.++.++.++++++.+.+.|++++|+.+..|+|+ |+|+++ |. ..++... |.++||.+.||+.|
T Consensus 262 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~--~~-------------~~~~~~~-l~~~gI~v~~~~~f 324 (354)
T PRK06358 262 YIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKL--EK-------------PIDLRKE-LLKKGILIRSCSNY 324 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEc--Cc-------------hHHHHHH-HHHCCeEEEECCCC
Confidence 3445677889999999999998888888888776 778544 32 3455544 55689999999999
Q ss_pred CCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 417 GQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 417 ~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
+. .+.+++||+++.+ ++.+++++.|++++
T Consensus 325 ~~-~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 325 RG-LDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred CC-CCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 54 2456899999976 78889998888765
No 76
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=317.19 Aligned_cols=327 Identities=23% Similarity=0.373 Sum_probs=276.1
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcC--CCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------c
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------F 162 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~ 162 (463)
....|.+..|.+.+|+++|+|+.+-.| +.++|+++++++|++.++..+..+|+ +|||..++| .
T Consensus 113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdrdl~~rT 191 (471)
T KOG0256|consen 113 ELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDRDLRWRT 191 (471)
T ss_pred hHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccccceecc
Confidence 457899999999999999999987665 56899999999999999999999998 999999998 4
Q ss_pred Ccee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 163 HTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 163 g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+++ ..+++.++. ++||.++++.++.+.++|.|+|+||+||.|.+++++++..++.++.++|+.||+||+|+.
T Consensus 192 gveivpv~c~Ss~~f~itv-~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 192 GVEIVPVHCSSSNGFQITV-EALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred CceEEEEEeecCCCccccH-HHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 4444 678899999 999999999988888999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHH
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIF 316 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~ 316 (463)
..| ++..+.|+.++..+. +...+++-++.|+||-| |+||+|+|.++. -++.++++..++.+ ...+|+..|..
T Consensus 271 sVF-~~~~F~Sv~ev~~~~---~~~~~rvHivyslSKD~-GlpGfRvGviYS--~ne~VvsaA~kmss-f~~vSs~tQ~~ 342 (471)
T KOG0256|consen 271 SVF-DKSEFRSVLEVRKDP---HLDPDRVHIVYSLSKDF-GLPGFRVGVIYS--NNEDVVSAATKMSS-FGLVSSQTQYL 342 (471)
T ss_pred ccc-CccCceEHHHHhhcc---ccCCCcEEEEEEecccc-CCCceEEEEEEe--cChHHHHHHHHHhh-ccCCcHHHHHH
Confidence 999 566888888876554 11556889999999999 999999999997 57888888888888 66789999999
Q ss_pred HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChH
Q 041151 317 MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDV 396 (463)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (463)
++.+|.+. +..+.| +++...+++.+.+++.+.|+++ |+.+....+|+|+|++++.. +...+ ++...
T Consensus 343 la~LLSD~----~f~~~y---l~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~l---L~s~t---fe~El 408 (471)
T KOG0256|consen 343 LASLLSDE----EFTREY---LRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKL---LTSLT---FEGEL 408 (471)
T ss_pred HHHHhchH----HHHHHH---HHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHh---cCcCC---hHHHH
Confidence 99999742 233333 4457788999999999999999 99999999999999998621 11111 22345
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 041151 397 FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 397 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~ 450 (463)
++...++.+-++.+.||+.|.+. ..+|+|++|+ ..++.++-+++||++++.+.
T Consensus 409 ~Lw~~i~~~vklnlSpG~s~~C~-EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 409 ELWERILDNVKLNLSPGSSCHCH-EPGWFRVCFANMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred HHHHHHHHhhccccCCCCcceec-CCCeEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 66677777779999999999884 4569999999 55555555999999999854
No 77
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-41 Score=335.75 Aligned_cols=352 Identities=16% Similarity=0.174 Sum_probs=273.5
Q ss_pred hhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhh
Q 041151 16 KKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSL 95 (463)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~ 95 (463)
.+++++.+..+........ .+.++|+|+.|.+.. +. ++.+.+++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~ 56 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVF-KDKEMIWMGQNTNHL------------------------GP-----HEEVREAMIRCIEE 56 (380)
T ss_pred cccCcchhhhHHHHHHHHh-hcCCeEEccCCCCCC------------------------CC-----CHHHHHHHHHHHhc
Confidence 3667777776666554443 356799999998775 43 78888888887765
Q ss_pred cCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------c
Q 041151 96 TSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------F 162 (463)
Q Consensus 96 ~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~ 162 (463)
.....|+++.|.++||++++++++ +++++|++|+|+++++..++.+++ .+||.|+++ .
T Consensus 57 --~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~~~g~t~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~ 127 (380)
T PRK06225 57 --GEYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLYLVMRAFL-SPGDNAVTPDPGYLIIDNFASRF 127 (380)
T ss_pred --CCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHHh
Confidence 245679999999999999999985 678899999999999999999997 899999996 4
Q ss_pred Ccee---c----CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 163 HTTW---K----RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 163 g~~~---~----~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
|.++ + ..++.+|+ +.+++.+.+ ++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.
T Consensus 128 g~~~~~v~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~ 200 (380)
T PRK06225 128 GAEVIEVPIYSEECNYKLTP-ELVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR 200 (380)
T ss_pred CceEEeeccccccCCccCCH-HHHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH
Confidence 5555 2 12478999 999998876 79999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHH
Q 041151 236 QNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQI 315 (463)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~ 315 (463)
++.. +.. +...+ + ..++|++.||||++ |++|+|+||++ +++++++.+.......++++.+.|.
T Consensus 201 ~~~~--~~~--~~~~~--------~-~~~~i~~~s~SK~~-g~~G~RiG~i~---~~~~l~~~~~~~~~~~~~~~~~~~~ 263 (380)
T PRK06225 201 DFAR--EHT--LAAEY--------A-PEHTVTSYSFSKIF-GMAGLRIGAVV---ATPDLIEVVKSIVINDLGTNVIAQE 263 (380)
T ss_pred HHhc--cCC--chhhc--------C-CCCEEEEeechhhc-CCccceeEEEe---cCHHHHHHHHHHHhcccCCCHHHHH
Confidence 7643 121 22221 2 24689999999999 99999999999 5889999888765446778899999
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHhhcCCCC
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAKRAGKVP 394 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (463)
++..++... ..+.+++++.++++++.+.+.|++++|+.+ ..|.+++|+|+++... + .+
T Consensus 264 ~a~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~-~----------~~ 322 (380)
T PRK06225 264 AAIAGLKVK----------DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA-G----------ID 322 (380)
T ss_pred HHHHHHhcc----------hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc-c----------CC
Confidence 988887521 122344566778888889999988777543 2455677778655311 1 12
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 395 DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 395 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+.++... |.++||.++||..|+...+.+++|++++.+++++++++++|++++++++.
T Consensus 323 ~~~l~~~-l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 323 PEDLVEY-LLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHH-HHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 4455444 55889999999877654456799999998789999999999999987653
No 78
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-41 Score=337.73 Aligned_cols=327 Identities=18% Similarity=0.193 Sum_probs=244.6
Q ss_pred HHHHHHHHHhhhc-CCCCCccCCCCCCHHHHHHHHHHHHHhcCCCC--CCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 84 DAIARAKHYLSLT-SGGLGAYSDSRGIPGVRKEVAEFIERRDGYPS--DPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 84 ~~~~a~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~--~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
.+++++.+.+... ....++|+++.|.++||+++++++.++++... +.++|++|+|+++++..++.+++ +|||.|++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv 98 (388)
T PRK08637 20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLL 98 (388)
T ss_pred chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEE
Confidence 4455555544431 23568999999999999999999876553211 23689999999999999999998 99999999
Q ss_pred c--------------cCcee---c--CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 161 L--------------FHTTW---K--RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 161 p--------------~g~~~---~--~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
+ .|+++ + .+++++|+ +.+++.++.... ...++++++|||||||.++|.+++++|+++|
T Consensus 99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~-~~l~~~~~~~~~--~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~ 175 (388)
T PRK08637 99 PDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDT-DALKEALQAAYN--KGKVIVILNFPNNPTGYTPTEKEATAIVEAI 175 (388)
T ss_pred cCCCCccHHHHHHHhcCCEEEEecccCCCCcCCH-HHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 6 45555 3 25678999 999998871100 1445667779999999999999999999988
Q ss_pred hh-----CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCce--EEEEecCCcccCCCCCceeEEEEecC---C
Q 041151 222 YQ-----ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQ--LVSFHTVSKGYWGECGQRGGYFEMTN---I 291 (463)
Q Consensus 222 ~~-----~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~S~SK~~~g~~G~R~G~~~~~~---~ 291 (463)
++ |+++||+||+|.++.|+ +....++..... +..++ +|+++|+||.+ ++||+|+||++++. +
T Consensus 176 ~~~~~~~~~~~iI~De~Y~~l~~~-~~~~~~~~~~~~------~~~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~~~ 247 (388)
T PRK08637 176 KELADAGTKVVAVVDDAYFGLFYE-DSYKESLFAALA------NLHSNILAVKLDGATKEE-FVWGFRVGFITFGTKAGS 247 (388)
T ss_pred HHHHhcCCcEEEEecccchhcccC-CccchhhHHHhh------cccccceEEEeccccccC-CCcccceEEEEEccccCC
Confidence 75 89999999999999883 333334322111 12234 45567999998 89999999999742 3
Q ss_pred ChhHHHHHHhhh----h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcc
Q 041151 292 PPKTVDEIYKIA----S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---RNVV 363 (463)
Q Consensus 292 ~~~~~~~l~~~~----~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---pg~~ 363 (463)
++++++.+.+.. . ..+++|.+.|.++..++++ +. +.++.++.+..++++++.+.+.|+.. +++.
T Consensus 248 ~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-----~~---~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~ 319 (388)
T PRK08637 248 SQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNS-----PE---FDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQ 319 (388)
T ss_pred cHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCC-----HH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Confidence 577888876421 1 2457899999999999963 22 34445567778999999999988764 2688
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMES 442 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~ 442 (463)
+.+|+||||+|++++ . . ++.+++..+++++||.+.+. +.+++||+++ .+.+++++++++
T Consensus 320 ~~~~~~g~~~~~~l~--~-~----------~~~~l~~~l~~~~gv~~~~~-------~~~~iRi~~~~~~~~~i~~~~~~ 379 (388)
T PRK08637 320 AYPFNSGYFMCLKLK--G-V----------DAEELRVHLLEKYGIGTIAL-------NETDLRIAFSCVEEEDIPELFDS 379 (388)
T ss_pred cccccceEEEEecCC--h-H----------HHHHHHHHHhhhcceEEEec-------cCCceEEEeecCCHHHHHHHHHH
Confidence 889999999996553 2 1 25667777677889988742 2348999999 788999999999
Q ss_pred HHHHHHHH
Q 041151 443 FKKFNDEF 450 (463)
Q Consensus 443 l~~~l~~~ 450 (463)
|+++++++
T Consensus 380 l~~~~~~~ 387 (388)
T PRK08637 380 IYKAIKDL 387 (388)
T ss_pred HHHHHHhc
Confidence 99998764
No 79
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-41 Score=336.35 Aligned_cols=314 Identities=17% Similarity=0.152 Sum_probs=249.9
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
.++++|+.|.|.. +. ++.+.+++.+.+.. ..|.+..|.+++|+++|
T Consensus 29 ~~~i~l~~n~~~~------------------------~~-----~~~v~~a~~~~~~~-----~~~~p~~g~~~lr~~ia 74 (359)
T PRK03158 29 EKIVKLASNENPY------------------------GP-----SPKVKEAIAAHLDE-----LALYPDGYAPELRTKVA 74 (359)
T ss_pred CceEEecCCCCCC------------------------CC-----CHHHHHHHHHHHHH-----hhcCCCCcHHHHHHHHH
Confidence 3689999998774 22 77788888777654 34556679999999999
Q ss_pred HHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cCCCcccChHHHHHH
Q 041151 118 EFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KRQQIGVLIINDLQQ 181 (463)
Q Consensus 118 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~~~~~~d~~~~l~~ 181 (463)
++++ +++++|++|+|+++++..++.+++ ++||.|+++ .|.++ +.+++++|+ +.+++
T Consensus 75 ~~~~------~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~-~~l~~ 146 (359)
T PRK03158 75 KHLG------VDEEQLLFGAGLDEVIQMISRALL-NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDL-EAMLK 146 (359)
T ss_pred HHhC------CCHHHEEECCCHHHHHHHHHHHHh-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCH-HHHHH
Confidence 9985 788999999999999999999998 899999996 56665 444678999 99998
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK 261 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (463)
.+++ ++++|++++||||||.+++.+++.++++.|+ ++++||+||+|.++.++ +.....+..+ +.
T Consensus 147 ~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~-~~~~~~~~~~--------~~ 210 (359)
T PRK03158 147 AIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTA-EDYPDTLPLL--------EK 210 (359)
T ss_pred hcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCC-cccccHHHHH--------Hh
Confidence 8766 7999999999999999999999999998875 69999999999998773 2222222222 23
Q ss_pred CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 262 EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 262 ~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
.+++|+++||||.| |++|+|+||++ +++++++.+.+... .++++.+.|.++..++++ ..+.+..
T Consensus 211 ~~~vi~~~S~SK~~-g~~GlRiG~~v---~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~-----------~~~~~~~ 274 (359)
T PRK03158 211 YENLIVLRTFSKAY-GLAALRVGYGI---ASEELIEKLNIARP-PFNTTRIAQYAAIAALED-----------QAFLKEC 274 (359)
T ss_pred cCCEEEEEechHhh-cCcchhhehhc---CCHHHHHHHHHhcC-CCCCCHHHHHHHHHHhcC-----------HHHHHHH
Confidence 34799999999999 99999999999 69999999988776 578899999999999852 1223345
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEG 421 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 421 (463)
++.++++++.+.+.|.+. |+.+.++ +++|+|+++. . ++.+++.. |.++||.+.||+.|+.
T Consensus 275 ~~~~~~~~~~~~~~l~~~-~~~~~~~-~g~~i~~~~~--~------------~~~~~~~~-l~~~gv~v~~g~~f~~--- 334 (359)
T PRK03158 275 VEKNAEGLEQYYAFCKEY-GLFYYPS-QTNFIFVDTG--R------------DANELFEA-LLKKGYIVRSGAALGF--- 334 (359)
T ss_pred HHHHHHHHHHHHHHHHHC-CCeeCCC-cCcEEEEECC--C------------CHHHHHHH-HHHCCeEEeeCCCCCC---
Confidence 667888888999999888 7777654 5678996553 1 24455555 4568999999999974
Q ss_pred CcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 422 IFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 422 ~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
.+++||+++. .+++++++++|+++
T Consensus 335 ~~~iRi~~~~-~~~~~~l~~al~~~ 358 (359)
T PRK03158 335 PTGVRITIGL-KEQNDKIIELLKEL 358 (359)
T ss_pred CCeEEEecCC-HHHHHHHHHHHHHh
Confidence 2489999995 47899999999875
No 80
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-41 Score=335.24 Aligned_cols=321 Identities=18% Similarity=0.245 Sum_probs=254.6
Q ss_pred cceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHH
Q 041151 39 KIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAE 118 (463)
Q Consensus 39 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 118 (463)
..++|+.|.|++ +. |+.+++++.+++.........|++ .|.+.||+++|+
T Consensus 27 ~~i~l~~~~~~~------------------------~~-----~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~ 76 (368)
T PRK03317 27 VPVRLNTNENPY------------------------PP-----SPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAA 76 (368)
T ss_pred ceeEecCCCCCC------------------------CC-----CHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHH
Confidence 358999998875 44 888999998877542224578876 588999999999
Q ss_pred HHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c-CCCcccChHHHHHH
Q 041151 119 FIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K-RQQIGVLIINDLQQ 181 (463)
Q Consensus 119 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~-~~~~~~d~~~~l~~ 181 (463)
|+++++|+++++++|++|+|+++++..++.+++ +|||.|+++ .|.++ + .+++++|+ +.+++
T Consensus 77 ~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~-~~l~~ 154 (368)
T PRK03317 77 YLTAQTGVGLTVENVWAANGSNEILQQLLQAFG-GPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDV-DAAVA 154 (368)
T ss_pred HhhhhccCCCChhhEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCH-HHHHH
Confidence 999998999999999999999999999999998 999999986 45555 2 45789999 99999
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK 261 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (463)
++.+. ++++|++++||||||.+++.+++++|+++| +++||+||+|.++.+. +. .+...+. +.
T Consensus 155 ~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~-~~--~~~~~~~-------~~ 216 (368)
T PRK03317 155 AIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRS-GT--PSALTLL-------PE 216 (368)
T ss_pred HHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhccc-CC--cCHHHHH-------Hh
Confidence 98753 689999999999999999999999988876 6899999999998662 22 2333332 22
Q ss_pred CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 262 EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 262 ~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
..++|+++||||+| |++|+|+||++ +++++++.+.+... .++++.+.|.++..++.. .+.+ .+.
T Consensus 217 ~~~~i~~~SfSK~~-g~~GlRiG~~~---~~~~~~~~l~~~~~-~~~~s~~~~~a~~~~l~~-------~~~~----~~~ 280 (368)
T PRK03317 217 YPRLVVSRTMSKAF-AFAGGRLGYLA---AAPAVVDALRLVRL-PYHLSAVTQAAARAALRH-------ADEL----LAS 280 (368)
T ss_pred CCCEEEEEechhhh-ccchhhhhhhh---CCHHHHHHHHhcCC-CCCCCHHHHHHHHHHhhC-------HHHH----HHH
Confidence 23789999999999 89999999999 69999999987765 678899999999888852 1112 233
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEG 421 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 421 (463)
++.++++++.+.+.|++. |+.+..++++|++|.++. ++..+ .+.|.++||.+.++ +.
T Consensus 281 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---------------~~~~~-~~~l~~~Gv~v~~~---~~--- 337 (368)
T PRK03317 281 VAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA---------------DRHAV-WQGLLDRGVLIRDV---GI--- 337 (368)
T ss_pred HHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC---------------CHHHH-HHHHHHCCEEEEeC---CC---
Confidence 456788888999999887 888888999999884432 13344 45566789999874 22
Q ss_pred CcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 422 IFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 422 ~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
.+++||+++.. ++++.+++.|+++++.
T Consensus 338 ~~~iRi~~~~~-~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 338 PGWLRVTIGTP-EENDAFLAALAEVLAT 364 (368)
T ss_pred CCeEEEecCCH-HHHHHHHHHHHHHHHH
Confidence 24899999854 6889999999887754
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-40 Score=331.17 Aligned_cols=327 Identities=14% Similarity=0.152 Sum_probs=247.6
Q ss_pred HHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCC
Q 041151 27 YLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDS 106 (463)
Q Consensus 27 ~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~ 106 (463)
...++++.-+++++++|+.|.|++ +. |+.+++++.+.+.. ...|++.
T Consensus 9 ~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----p~~~~~a~~~~~~~----~~~y~~~ 55 (356)
T PRK08056 9 REAATVLGISPDQLLDFSANINPL------------------------GM-----PVSLKRAIIDNLDC----AERYPDV 55 (356)
T ss_pred HHHHHHhCCChhhEEEeccccCCC------------------------CC-----CHHHHHHHHHHHHh----cccCcCc
Confidence 333444554567799999997775 33 88899998877654 2468764
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE-c-----------cCcee---c---C
Q 041151 107 RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL-L-----------FHTTW---K---R 168 (463)
Q Consensus 107 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv-p-----------~g~~~---~---~ 168 (463)
++.+||++||++++ +++++|++|+|+++++..++.++ .+|+.|+. | .|+++ + .
T Consensus 56 -~~~~lr~~ia~~~~------~~~~~i~it~Ga~~~l~~~~~~l--~~g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~ 126 (356)
T PRK08056 56 -EYRHLHQALARHHQ------VPASWILAGNGETESIFAVVSGL--KPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREA 126 (356)
T ss_pred -cHHHHHHHHHHHhC------cChhhEEECCCHHHHHHHHHHHh--CCCCEEEeCCCcHHHHHHHHHcCCeEEEEecccc
Confidence 68999999999985 78999999999999999999986 57876555 3 56665 2 2
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
+++.+|. + +++.+.+ ++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.++.+ ++..+.+.
T Consensus 127 ~~~~~~~-~-~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~ 197 (356)
T PRK08056 127 DGWQLTD-A-ILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIP-DETGFIPQ 197 (356)
T ss_pred cCCCccH-H-HHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCC-cchHHHHH
Confidence 3455553 3 4444544 799999999999999999999999999999999999999999999876 22222121
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCC
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
+ ...+++|+++||||+| |++|+|+||++. .++++++.+.+... .++++.+.|.++..++.+
T Consensus 198 ------~----~~~~~~i~~~S~SK~~-~~~G~RiG~~v~--~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~l~~----- 258 (356)
T PRK08056 198 ------L----ADNPHLWVLRSLTKFY-AIPGLRLGYLVN--SDDAAVARMRRQQM-PWSINAFAALAGEVILQD----- 258 (356)
T ss_pred ------h----ccCCCEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHHhCC-CCchhHHHHHHHHHHhCC-----
Confidence 1 2234789999999999 999999999984 35678888877654 567788999999888752
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCe
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGI 408 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI 408 (463)
..+.+++++.++++++.+.+.|++++|+.+.++ +++|+|+++. . ++.+++.. |.++||
T Consensus 259 ------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~--~------------~~~~~~~~-l~~~gI 316 (356)
T PRK08056 259 ------RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCE--R------------PDIDLQRA-LLTQRI 316 (356)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcC--C------------ChHHHHHH-HHHCCe
Confidence 122345678899999999999998888876655 5788896554 1 13455544 557899
Q ss_pred EeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 409 STVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 409 ~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
.|++|+.|.. .+.+++||+++.. ++.+.+++.|++++
T Consensus 317 ~v~~~~~f~~-~~~~~iRis~~~~-~~~~~l~~~l~~~~ 353 (356)
T PRK08056 317 LIRSCANYPG-LDSRYYRVAIRSA-AENERLLAALRNVL 353 (356)
T ss_pred EEEECCCCCC-CCCCEEEEEEcCH-HHHHHHHHHHHHHH
Confidence 9999999953 2345999999854 78888888887764
No 82
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-40 Score=331.18 Aligned_cols=319 Identities=19% Similarity=0.223 Sum_probs=246.5
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
.+.++|+|+.|.|.+ .. |+.+.+++.+... ....|++..| .+||++
T Consensus 34 ~~~~~i~l~~~~~~~------------------------~~-----~~~~~~al~~~~~----~~~~Y~~~~g-~~lr~~ 79 (371)
T PRK05166 34 GVPRIAKLGSNENPL------------------------GP-----SPAVRRAFADIAE----LLRLYPDPQG-RALREA 79 (371)
T ss_pred CCcceEEcCCCCCCC------------------------CC-----CHHHHHHHHHHHH----HhhcCCCCcH-HHHHHH
Confidence 455799999997764 22 6777777765433 2467999888 499999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---c-CCCcccChHHH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---K-RQQIGVLIIND 178 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~-~~~~~~d~~~~ 178 (463)
+|++++ +++++|++|+|+++++..++.+++ ++||.|+++ .|+++ + ..++++|+ ++
T Consensus 80 ia~~~~------~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~ 151 (371)
T PRK05166 80 IAARTG------VPADRIILGNGSEDLIAVICRAVL-RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDL-DA 151 (371)
T ss_pred HHHHhC------cCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCH-HH
Confidence 999985 678999999999999999999998 899999986 56666 2 33578999 99
Q ss_pred HHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCC
Q 041151 179 LQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLP 258 (463)
Q Consensus 179 l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 258 (463)
+++.+++ ++++|+++|||||||.+++.+++++|+++|++ +++||+||+|.++.++ + ...+......+
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~-~-~~~~~~~~~~~---- 218 (371)
T PRK05166 152 LCAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAG-D-DYPSALTLLKA---- 218 (371)
T ss_pred HHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCC-c-CcccHHHHHhh----
Confidence 9998876 78999999999999999999999999999875 8899999999998762 2 22343333221
Q ss_pred CCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHH
Q 041151 259 FSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRES 338 (463)
Q Consensus 259 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 338 (463)
..+++|+++||||.| |+||+|+||+++ +++++++.+.+... .++++.+.|.++.+++.+ ..+.
T Consensus 219 --~~~~vi~i~SfSK~~-~l~GlRiG~~i~--~~~~l~~~~~~~~~-~~~~~~~~q~~~~~~l~~-----------~~~~ 281 (371)
T PRK05166 219 --RGLPWIVLRTFSKAY-GLAGLRVGYGLV--SDPELVGLLDRVRT-PFNVNGAAQAAALAALDD-----------EEHL 281 (371)
T ss_pred --cCCCEEEEeechHhh-hcchhheeeeec--CCHHHHHHHHHhcc-CCCCCHHHHHHHHHHhcC-----------HHHH
Confidence 224799999999999 999999999875 57888888887665 567899999888887742 1234
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 339 KGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 339 ~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
++.++.++++++.+.+.|++. |+.+. |.+++|+|+++. . ++.++... |.++||.+.||..++.
T Consensus 282 ~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~--~------------~~~~l~~~-l~~~gi~v~p~~~~~~ 344 (371)
T PRK05166 282 AKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDAR--R------------PASAVAEA-LLRQGVIVKPWKQPGF 344 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCC--C------------CHHHHHHH-HHHCCeEEecCCCCCC
Confidence 456778899999999999988 77754 556788896643 1 24555544 5567999999986543
Q ss_pred CCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 419 ~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
.+++||+++.. ++.+++++.|+.++
T Consensus 345 ---~~~iRi~~~~~-~~~~~l~~~l~~i~ 369 (371)
T PRK05166 345 ---ETFIRVSIGSP-EENDHFVAALDKVL 369 (371)
T ss_pred ---CCeEEEEcCCH-HHHHHHHHHHHHHh
Confidence 45899999954 45666666665543
No 83
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-40 Score=331.07 Aligned_cols=323 Identities=16% Similarity=0.149 Sum_probs=252.4
Q ss_pred HHhcccc-eeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHH
Q 041151 34 QKEGKKI-IFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGV 112 (463)
Q Consensus 34 ~~~~~~~-i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~l 112 (463)
...|.++ ++|+.|+|++ +. |+.+++++.+.+.. ..+|+++ +.++|
T Consensus 27 ~~~g~~~~~~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~----~~~Y~~~-~~~~L 72 (369)
T PRK08153 27 RQRGRPFRARIGANESGF------------------------GP-----SPSVIAAMREAAAE----IWKYGDP-ENHDL 72 (369)
T ss_pred HhcCCcceeEecCCCCCC------------------------CC-----CHHHHHHHHHHHHH----hhcCCCC-ccHHH
Confidence 3467765 6999999885 44 88899988876643 3578876 47899
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cCCCcccChH
Q 041151 113 RKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KRQQIGVLII 176 (463)
Q Consensus 113 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~~~~~~d~~ 176 (463)
|++||++++ +++++|++|+|+++++..++.+++ +|||.|+++ .|+++ +.+...+|+
T Consensus 73 r~~ia~~~~------~~~~~I~it~G~~~~l~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~- 144 (369)
T PRK08153 73 RHALAAHHG------VAPENIMVGEGIDGLLGLIVRLYV-EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDL- 144 (369)
T ss_pred HHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCH-
Confidence 999999985 788999999999999999999998 899999996 45555 444557888
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.+++.+... ++++|++++||||||.++|.+++.+|+++|++ +++||+||+|.++.++ + ...++..
T Consensus 145 ~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~-~-~~~~~~~------ 210 (369)
T PRK08153 145 DALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPE-TTLLVLDEAYCETAPA-G-AAPPIDT------ 210 (369)
T ss_pred HHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCc-c-cchhhhh------
Confidence 9988776542 78999999999999999999999999999874 9999999999998762 2 1222221
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVR 336 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 336 (463)
...++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..++++ ..
T Consensus 211 ----~~~~~i~~~SfSK~~-g~~GlRiG~~v---~~~~~~~~l~~~~~-~~~~s~~~q~~~~~~l~~-----------~~ 270 (369)
T PRK08153 211 ----DDPNVIRMRTFSKAY-GLAGARVGYAI---GAPGTIKAFDKVRN-HFGMNRIAQAAALAALKD-----------QA 270 (369)
T ss_pred ----cCCCEEEEecchHhc-cCcchheeeee---cCHHHHHHHHHhhc-CCCCCHHHHHHHHHHhcC-----------HH
Confidence 124799999999999 99999999999 68999999988776 577899999999999852 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEee-CCCC
Q 041151 337 ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTV-PGSG 415 (463)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~-pg~~ 415 (463)
+.++.++.++++++.+.+.|++. |+.+. |.+++|+|+++..... .... +.+.|.++||.++ |+..
T Consensus 271 ~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~~-----------~a~~-l~~~l~~~Gi~v~~p~~~ 336 (369)
T PRK08153 271 YLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDGA-----------FARA-VLDGLIARDIFVRMPGVA 336 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCcc-----------cHHH-HHHHHHHCCeEEeeCCCC
Confidence 24456778899999999999887 77644 6788889966531110 1233 3444567899995 5542
Q ss_pred CCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 041151 416 FGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 416 f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
. +.+++||+++. +++++.+++.|++++.+.+
T Consensus 337 ~----~~~~iRis~~~-~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 337 P----LDRCIRVSCGP-DEELDLFAEALPEALEAAR 367 (369)
T ss_pred C----CCCeEEEecCC-HHHHHHHHHHHHHHHHHhh
Confidence 1 33589999994 5899999999999887554
No 84
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-40 Score=332.32 Aligned_cols=337 Identities=16% Similarity=0.200 Sum_probs=252.8
Q ss_pred hhhhhhhccch-hhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 11 MNENVKKVQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 11 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
+.+.+.++.+. +.+.+...+++....++++|+|+.|.+.+ +. |+.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~------------------------~~-----~~~v~~a~ 74 (380)
T PLN03026 24 IRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPY------------------------GP-----PPEVLEAL 74 (380)
T ss_pred hhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCC------------------------CC-----CHHHHHHH
Confidence 33445454443 33344444444444467899999997664 33 66777776
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+. . ....|+++ +..+||++++++++ +++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 75 ~~~-~----~~~~Yp~~-~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i~~~~~~~~-~~gd~Vlv~~P~y~~y~ 141 (380)
T PLN03026 75 GNM-K----FPYVYPDP-ESRRLRAALAEDSG------LESENILVGCGADELIDLLMRCVL-DPGDKIIDCPPTFGMYV 141 (380)
T ss_pred Hhh-H----hhccCCCC-CHHHHHHHHHHHhC------cChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHH
Confidence 542 1 23468765 68999999999986 789999999999999999999998 899999996
Q ss_pred -----cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 162 -----FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 162 -----~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
.|+++ ...++++|+ +.|++.+... ++++|++|+||||||.+++.+++.+|++.+ ++||+||
T Consensus 142 ~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~De 211 (380)
T PLN03026 142 FDAAVNGAEVIKVPRTPDFSLDV-PRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDE 211 (380)
T ss_pred HHHHHcCCEEEEeecCCCCCcCH-HHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEEC
Confidence 66666 234688999 9999988432 799999999999999999999999988753 8999999
Q ss_pred cccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChH
Q 041151 233 VYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVP 312 (463)
Q Consensus 233 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 312 (463)
+|.++.+ .+ +..... ...+++|+++||||.| |++|+|+||++ +++++++.+.+... .++.+.+
T Consensus 212 aY~~~~~-~~----~~~~~~-------~~~~~viv~~SfSK~~-glaGlRiGy~~---~~~~~i~~l~~~~~-~~~~~~~ 274 (380)
T PLN03026 212 AYIEFST-QE----SRMKWV-------KKYDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQ-PYNVSVA 274 (380)
T ss_pred cchhhcC-Cc----chHHHH-------HhCCCEEEEecchHhh-cCccccceeee---cCHHHHHHHHHhcC-CCCCCHH
Confidence 9998765 22 111211 2235799999999999 99999999999 69999999988776 5778999
Q ss_pred HHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCC
Q 041151 313 AQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGK 392 (463)
Q Consensus 313 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 392 (463)
.|.++.++|++ ..+.++.++.++++++.+.+.|++++++.+ .|.+++|+|+++. .+
T Consensus 275 ~q~aa~~aL~~-----------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~--~~---------- 330 (380)
T PLN03026 275 AEVAACAALSN-----------PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVT--SG---------- 330 (380)
T ss_pred HHHHHHHHhhC-----------HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECC--CC----------
Confidence 99999998852 123445788899999999999998844544 5677888896543 21
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 393 VPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 393 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
.++.++... |.++||.|+++..++ ..+++|||++.. ++++.+++.|++
T Consensus 331 ~~~~~~~~~-l~~~gI~v~~~~~~~---~~~~lRis~~~~-~~~~~l~~al~~ 378 (380)
T PLN03026 331 RDAKKLKED-LAKMGVMVRHYNSKE---LKGYIRVSVGKP-EHTDALMEALKQ 378 (380)
T ss_pred CCHHHHHHH-HHHCCeEEEECCCCC---CCCEEEEecCCH-HHHHHHHHHHHH
Confidence 124555544 558899999987643 345899999954 577777777754
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-40 Score=329.21 Aligned_cols=313 Identities=17% Similarity=0.205 Sum_probs=249.5
Q ss_pred cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHH
Q 041151 37 GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEV 116 (463)
Q Consensus 37 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 116 (463)
+.++++|+.|.|++ +. |+.+++++.+++.. .....|++ .|.++||+++
T Consensus 25 ~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~--~~~~~Y~~-~~~~~lr~~i 72 (356)
T PRK04870 25 ATGMVKLDAMENPY------------------------RL-----PAELRAELGERLAE--VALNRYPD-PRAAALKAAL 72 (356)
T ss_pred CCCceeCcCCCCCC------------------------CC-----CHHHHHHHHHHhhc--cccccCCC-CCHHHHHHHH
Confidence 45799999998875 44 88999999887764 24578987 5789999999
Q ss_pred HHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHH
Q 041151 117 AEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIIND 178 (463)
Q Consensus 117 a~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~ 178 (463)
|+|++ +.+ ++|++|+|+++++..++.+++ ++||+|+++ .|+++ ..+++++|+ +.
T Consensus 73 a~~~~------~~~~~~I~~t~G~~~~i~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~-~~ 144 (356)
T PRK04870 73 RAAMG------VPAGADVLLGNGSDELIQLLALACA-KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDL-PA 144 (356)
T ss_pred HHHhC------cCCCCcEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCH-HH
Confidence 99985 444 589999999999999999998 899999997 67766 234578999 99
Q ss_pred HHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCC
Q 041151 179 LQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLP 258 (463)
Q Consensus 179 l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 258 (463)
+++.+.+. ++++|++++||||||.+++.+++++|+++| +.++|+||+|..+.+ . ...+ .+
T Consensus 145 l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~-~--~~~~--~~------- 204 (356)
T PRK04870 145 MLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAG-D--SWLP--RL------- 204 (356)
T ss_pred HHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcC-c--chHH--HH-------
Confidence 99998753 789999999999999999999999999988 678999999998643 1 1111 11
Q ss_pred CCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHH
Q 041151 259 FSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRES 338 (463)
Q Consensus 259 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 338 (463)
...+++|+++|||| + ++||+|+||++ +++++++.+.+... .++++.+.|.++..+++. ..+.
T Consensus 205 -~~~~~vi~~~S~SK-~-~~~GlRiG~~i---~~~~~i~~~~~~~~-~~~~~~~~q~~a~~~l~~-----------~~~~ 266 (356)
T PRK04870 205 -ARFPNLLVMRTVSK-L-GLAGLRLGYLA---GHPAWIAELDKVRP-PYNVNVLTQATALFALEH-----------VDVL 266 (356)
T ss_pred -hhCCCEEEEecchh-h-hhHHHhhhhhh---CCHHHHHHHHHccC-CCcCCHHHHHHHHHHHhC-----------HHHH
Confidence 23347999999999 8 89999999999 68999999887765 567888999988888742 1224
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 339 KGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 339 ~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
++.++.++++++.+.+.|++++|+.+. |.+++|+|++++ . +..+ ...|+++||.|++|..|+.
T Consensus 267 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~--~-------------~~~~-~~~l~~~gI~v~~~~~f~~ 329 (356)
T PRK04870 267 DAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP--D-------------AAAV-FDGLKTRGVLVKNLSGMHP 329 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--C-------------HHHH-HHHHHHCCEEEEECCCCCC
Confidence 456778899999999999988888764 556678886543 1 3343 4667889999999999864
Q ss_pred CCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 419 ~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
...+++||+++.. +++++++++|+++
T Consensus 330 -~~~~~iRis~~~~-~~~~~l~~al~~~ 355 (356)
T PRK04870 330 -LLANCLRVTVGTP-EENAQFLAALKAA 355 (356)
T ss_pred -CCCCeEEEeCCCH-HHHHHHHHHHHHh
Confidence 2456999999954 7888888888765
No 86
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.3e-40 Score=327.21 Aligned_cols=343 Identities=20% Similarity=0.201 Sum_probs=265.4
Q ss_pred hhhhhhhccchhh-hhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 11 MNENVKKVQYAVR-GELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
+++++.+++++.. +.+...+++. .++++++|+.|.|.. +. |+.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~------------------------~~-----~~~~~~a~ 54 (367)
T PRK02731 6 PNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPL------------------------GP-----SPKAIEAI 54 (367)
T ss_pred chhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCC------------------------CC-----CHHHHHHH
Confidence 4456666666532 3344444444 567799999998764 22 67788888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------- 161 (463)
.+.+.. ...|++.. ..+||+++|++++ +++++|++|+|+++++..++.+++ ++||.|+++
T Consensus 55 ~~~~~~----~~~y~~~~-~~~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~l~-~~gd~vl~~~p~y~~~~ 122 (367)
T PRK02731 55 RAAADE----LHRYPDGS-GFELKAALAEKFG------VDPERIILGNGSDEILELLARAYL-GPGDEVIYSEHGFAVYP 122 (367)
T ss_pred HHHHHh----hcCCCCCc-HHHHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEecCCHHHHH
Confidence 877653 36788765 4799999999985 678999999999999999999997 899999997
Q ss_pred -----cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccc
Q 041151 162 -----FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEV 233 (463)
Q Consensus 162 -----~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Dea 233 (463)
.|.++ +.+++++|+ +.+++.+++ ++++|++++||||||.+++.+++.+|++.|+ ++++||+||+
T Consensus 123 ~~~~~~g~~~~~~~~~~~~~~~-~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~ 194 (367)
T PRK02731 123 IAAQAVGAKPVEVPAKDYGHDL-DAMLAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEA 194 (367)
T ss_pred HHHHHcCCeEEEecccCCCCCH-HHHHHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECc
Confidence 56666 556789999 999998875 7999999999999999999999999999875 6999999999
Q ss_pred ccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHH
Q 041151 234 YQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPA 313 (463)
Q Consensus 234 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 313 (463)
|..+.+. +....++ ... +...++|+++||||.| |++|+|+||++ +++++++.+.+... .++.+.+.
T Consensus 195 y~~~~~~-~~~~~~~-~~~-------~~~~~~i~~~S~SK~~-g~~G~RiG~l~---~~~~~~~~l~~~~~-~~~~~~~~ 260 (367)
T PRK02731 195 YAEYVRR-KDYEDGL-ELV-------AKFPNVVVTRTFSKAY-GLAGLRVGYGI---APPEIIDALNRVRQ-PFNVNSLA 260 (367)
T ss_pred HHHhccC-cCcccHH-HHH-------hhcCCEEEEeeehHhh-cCcccceeeee---CCHHHHHHHHHccC-CCCCCHHH
Confidence 9988773 2222233 221 2234789999999999 89999999999 68999999987765 46678899
Q ss_pred HHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCC
Q 041151 314 QIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV 393 (463)
Q Consensus 314 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 393 (463)
|.++..++++ ..+.++.++.++++++.+.+.|++. |+.+.+ .+++|+|+++ +.. .
T Consensus 261 ~~~a~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~g~~~~i~~--~~~----------~ 315 (367)
T PRK02731 261 LAAAVAALDD-----------DAFVEKSRALNAEGMAWLTEFLAEL-GLEYIP-SVGNFILVDF--DDG----------K 315 (367)
T ss_pred HHHHHHHhCC-----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCccCC-CCceEEEEEC--CCC----------C
Confidence 9999998852 1234457778899999999999988 887764 5568889665 221 1
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 394 PDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 394 ~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
++.+++ ..|.++||.++++..|+. .+++||+++. .++++++++.|+++++
T Consensus 316 ~~~~~~-~~L~~~gI~v~~~~~~~~---~~~iRis~~~-~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 316 DAAEAY-QALLKRGVIVRPVAGYGL---PNALRITIGT-EEENRRFLAALKEFLA 365 (367)
T ss_pred CHHHHH-HHHHHCCEEEEeCCCCCC---CCeEEEecCC-HHHHHHHHHHHHHHHh
Confidence 245554 446678999999998863 2489999985 4789999999988763
No 87
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.1e-39 Score=325.16 Aligned_cols=315 Identities=18% Similarity=0.168 Sum_probs=234.0
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
...++++|+.|.+.+ +. |+.+++++.+.+.. ...|+++. ..+||++
T Consensus 20 ~~~~~i~l~~~~n~~------------------------~~-----~~~~~~a~~~~~~~----~~~Y~~~~-~~~Lr~a 65 (360)
T PRK07392 20 PPDAILDFSASINPL------------------------GP-----PESVIAAIQSALSA----LRHYPDPD-YRELRLA 65 (360)
T ss_pred CcccEEEeCCcCCCC------------------------CC-----CHHHHHHHHHHHHH----hhcCCCcC-HHHHHHH
Confidence 344689999996654 33 78888888776653 46798764 6899999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cC---CCc---cc
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KR---QQI---GV 173 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~---~~~---~~ 173 (463)
||+|++ +++++|++|+|++++|..++.++. +||.|+++ .|+++ +. ..+ ..
T Consensus 66 ia~~~~------v~~~~I~it~G~~~~i~~~~~~l~--~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 137 (360)
T PRK07392 66 LAQHHQ------LPPEWILPGNGAAELLTWAGRELA--QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTL 137 (360)
T ss_pred HHHHhC------cChhhEEECCCHHHHHHHHHHHhC--CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCccccc
Confidence 999994 889999999999999999999874 68889986 67666 22 222 23
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHH
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLM 253 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 253 (463)
++ +.+++.. . ++++++++|||||||.+++.+++.++ ++++++ +|+||+|.++.++ +. ..++....
T Consensus 138 ~~-~~~~~~~-~------~~~~~~l~nP~NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~-~~-~~s~~~~~- 202 (360)
T PRK07392 138 RL-QTLPPQL-T------PNDGLLLNNPHNPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPP-DA-EQSLIPCL- 202 (360)
T ss_pred CH-HHHHHhc-c------CCCEEEEeCCCCCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccC-cc-ccchHHHh-
Confidence 45 5555432 2 68999999999999999997776655 457775 6669999998773 32 23433221
Q ss_pred hcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHH
Q 041151 254 DMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQ 333 (463)
Q Consensus 254 ~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 333 (463)
+...++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..++++ +.
T Consensus 203 ------~~~~~vi~i~S~SK~~-~l~GlRiG~~v---~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~-----~~--- 263 (360)
T PRK07392 203 ------AEYPNLIILRSLTKFY-SLPGLRLGYAI---AHPDRLQRWQQWRD-PWPVNGLAAAAAIAALAD-----RD--- 263 (360)
T ss_pred ------hcCCCEEEEEechhhh-cCCchheeeee---CCHHHHHHHHhhCC-CCCCCHHHHHHHHHHhcc-----HH---
Confidence 3345799999999999 99999999999 58889988877664 578899999999999863 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCC
Q 041151 334 FVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPG 413 (463)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg 413 (463)
+ .+..++.++++++.+.+.|++++|+.+.+ .+++|+|++++ . ++.++...+++++||.+.||
T Consensus 264 ~---~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~--~------------~~~~l~~~ll~~~gv~v~pg 325 (360)
T PRK07392 264 F---QQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQ--G------------SALQLQEKLLQQHRILIRDC 325 (360)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcC--C------------CHHHHHHHHHhhCCEEEEeC
Confidence 2 22345568888999999999888887654 77899996553 1 24566667778899999999
Q ss_pred CCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 414 SGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 414 ~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
..|+. .+.+++||+++.. ++.+++.+.|+++
T Consensus 326 ~~f~~-~~~~~iRi~~~~~-~~~~~l~~al~~~ 356 (360)
T PRK07392 326 LSFPE-LGDRYFRVAVRTE-AENQRLLEALAAI 356 (360)
T ss_pred CCCCC-CCCCEEEEEeCCH-HHHHHHHHHHHHH
Confidence 99975 2456999999964 2334444444443
No 88
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=8e-39 Score=317.79 Aligned_cols=310 Identities=16% Similarity=0.163 Sum_probs=240.9
Q ss_pred cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHH
Q 041151 37 GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEV 116 (463)
Q Consensus 37 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 116 (463)
+++++||+.|.+++ +. |+.+++++.+.+.. ...|+++.|..+||+++
T Consensus 21 ~~~~~~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~ai 67 (349)
T PRK07908 21 GPGLLDFAVNVRHD------------------------TP-----PEWLRERLAARLGD----LAAYPSTEDERRARAAV 67 (349)
T ss_pred CCCeEEecCCCCCC------------------------CC-----CHHHHHHHHHHhhH----hhcCCCccchHHHHHHH
Confidence 56799999998774 33 88889998887754 35799989999999999
Q ss_pred HHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE-c-----------cCcee---c-CCCcccChHHHHH
Q 041151 117 AEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL-L-----------FHTTW---K-RQQIGVLIINDLQ 180 (463)
Q Consensus 117 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv-p-----------~g~~~---~-~~~~~~d~~~~l~ 180 (463)
+++++ +++++|++|+|+++++..++. + ++|+.++. | .|+++ + +.++++|+ +.+
T Consensus 68 a~~~~------~~~~~I~it~Ga~~al~~~~~-l--~~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~-~~l- 136 (349)
T PRK07908 68 AARHG------RTPDEVLLLAGAAEGFALLAR-L--RPRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDP-AAV- 136 (349)
T ss_pred HHHhC------cChhhEEECCCHHHHHHHHHh-c--CCCeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcCh-hHh-
Confidence 99985 789999999999999999988 4 57665443 2 66666 2 22378888 754
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCC
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFS 260 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (463)
.+ ++++|+++|||||||.++|.+++.+ +|+ ++.++|+||+|.++.+ + . ..++... +
T Consensus 137 ---~~------~~~~i~l~np~NPTG~~~~~~~l~~---l~~-~~~~iIvDe~y~~~~~-~-~-~~~l~~~--------~ 192 (349)
T PRK07908 137 ---PD------DADLVVIGNPTNPTSVLHPAEQLLA---LRR-PGRILVVDEAFADAVP-G-E-PESLAGD--------D 192 (349)
T ss_pred ---cc------CCCEEEEcCCCCCCCCCcCHHHHHH---HHh-cCCEEEEECcchhhcc-C-C-ccccccc--------c
Confidence 23 6899999999999999999876655 454 4778889999998744 2 2 2343321 2
Q ss_pred CCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Q 041151 261 KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKG 340 (463)
Q Consensus 261 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (463)
.+++|+++||||.| |++|+|+||++ +++++++.+.+... .+..+.+.|.++..++... ..++.++
T Consensus 193 -~~~~i~i~S~SK~~-~l~GlRiG~~~---~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~---------~~~~~~~ 257 (349)
T PRK07908 193 -LPGVLVLRSLTKTW-SLAGLRVGYAL---GAPDVLARLTRGRA-HWPVGTLQLEAIAACCAPR---------AVAEAAA 257 (349)
T ss_pred -CCCEEEEeeccccc-CCccceeeeee---cCHHHHHHHHhcCC-CCCccHHHHHHHHHHhccc---------chHHHHH
Confidence 23689999999999 99999999999 58999999987765 4667778888887776521 1234556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC
Q 041151 341 ILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE 420 (463)
Q Consensus 341 ~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 420 (463)
+++.++++++.+.+.|+++ |+.+..|.+++|+|++++ . .+.+...|+++||.+.||..|+..
T Consensus 258 ~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--~--------------~~~~~~~l~~~gI~v~~g~~f~~~- 319 (349)
T PRK07908 258 DAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--D--------------AELLRKRLRERGIAVRRGDTFPGL- 319 (349)
T ss_pred HHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--c--------------HHHHHHHHHhCCEEEEECCCCCCC-
Confidence 7889999999999999988 888888899999996554 1 234566788999999999999642
Q ss_pred CCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 421 GIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 421 ~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
+.+++|||++ ++++++++++.|++++.
T Consensus 320 ~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 320 DPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 3569999997 45799999999987653
No 89
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-39 Score=322.01 Aligned_cols=311 Identities=17% Similarity=0.222 Sum_probs=241.6
Q ss_pred cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHH
Q 041151 37 GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEV 116 (463)
Q Consensus 37 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 116 (463)
++++|+|+.|.|.+ +. |+.+.+++.+.+.. ....|++. |.++||++|
T Consensus 23 ~~~~i~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~---~~~~y~~~-~~~~lr~ai 69 (353)
T PRK05387 23 LAKLIKLNTNENPY------------------------PP-----SPKVLEAIRAALGD---DLRLYPDP-NADALRQAI 69 (353)
T ss_pred ccceeeccCCCCCC------------------------CC-----CHHHHHHHHHHhhh---hhhcCCCC-cHHHHHHHH
Confidence 35789999999885 33 77888888876664 34678765 669999999
Q ss_pred HHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHHH
Q 041151 117 AEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIINDL 179 (463)
Q Consensus 117 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~l 179 (463)
|++++ +++++|++|+|++++|..++.+++ +|||.|++| .|+++ ..+++++|+ +.+
T Consensus 70 a~~~~------~~~~~I~it~G~~~al~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l 141 (353)
T PRK05387 70 AAYYG------LDPEQVFVGNGSDEVLAHAFLAFF-NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDV-EDY 141 (353)
T ss_pred HHHhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCH-HHH
Confidence 99985 789999999999999999999998 999999997 66665 234678999 988
Q ss_pred HHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCC
Q 041151 180 QQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPF 259 (463)
Q Consensus 180 ~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (463)
++ ..++|+++|||||||.+++.+++.+|+++++ +++||+||+|.++. +....++.
T Consensus 142 ~~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~---~~~~~~~~---------- 196 (353)
T PRK05387 142 LR----------PNGGIIFPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVDFG---GESAIPLI---------- 196 (353)
T ss_pred Hh----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccccC---CcchHHHH----------
Confidence 63 4688999999999999999999999998654 89999999998742 22211221
Q ss_pred CCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh--hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH
Q 041151 260 SKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE 337 (463)
Q Consensus 260 ~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 337 (463)
+...++|+++||||.| |++|+|+||++ +++++++.+.+... ..++++.+.|.++..++.+ ..+
T Consensus 197 ~~~~~~i~~~S~SK~~-~~~GlR~G~~~---~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~-----------~~~ 261 (353)
T PRK05387 197 DRYPNLLVVQTFSKSR-SLAGLRVGFAI---GHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIED-----------EAY 261 (353)
T ss_pred hhCCCEEEEEehhHhh-cchhhhceeee---cCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC-----------HHH
Confidence 2234789999999999 99999999999 68999999988764 2467889999999888752 122
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 041151 338 SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
.++.++++.++++.+.+.|+++ |+.+. |.+++|+|++++ .. ++.+++. .|.++||.+++ |+
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~--~~-----------~~~~~~~-~l~~~gi~v~~---~~ 322 (353)
T PRK05387 262 FEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHP--SH-----------DAAELAA-KLRERGIIVRH---FN 322 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECC--CC-----------CHHHHHH-HHHHCCEEEEE---CC
Confidence 3356778899999999999988 77764 556778885543 11 2445554 45788999985 33
Q ss_pred CCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 418 QKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 418 ~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.+...+++||+++. .+++++++++|++++.
T Consensus 323 ~~~~~~~iRis~~~-~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 323 KPRIDQFLRITIGT-DEEMEALVDALKEILA 352 (353)
T ss_pred CCCCCCeEEEEeCC-HHHHHHHHHHHHHHhh
Confidence 22234689999984 4899999999988764
No 90
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=316.48 Aligned_cols=311 Identities=16% Similarity=0.218 Sum_probs=239.5
Q ss_pred cceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHH
Q 041151 39 KIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAE 118 (463)
Q Consensus 39 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 118 (463)
..++|+.|.|++ +. |+.+++++.+.+.. .....|++. +..+||+++|+
T Consensus 23 ~~~~l~~~~~~~------------------------~~-----p~~~~~a~~~~~~~--~~~~~y~~~-~~~~lr~~ia~ 70 (351)
T PRK14807 23 YKYKMDANETPF------------------------EL-----PEEVIKNIQEIVKS--SQVNIYPDP-TAEKLREELAR 70 (351)
T ss_pred ceeEccCCCCCC------------------------CC-----CHHHHHHHHHHhhc--CcccCCCCc-cHHHHHHHHHH
Confidence 358899998885 44 88999998877754 245678765 46899999999
Q ss_pred HHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHHHHH
Q 041151 119 FIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIINDLQQ 181 (463)
Q Consensus 119 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~l~~ 181 (463)
+++ +++++|++|+|+++++..++.+++ ++||+|+++ .|.++ ....+++|+ +.+++
T Consensus 71 ~~~------~~~~~i~it~G~~~~l~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~ 142 (351)
T PRK14807 71 YCS------VVPTNIFVGNGSDEIIHLIMLAFI-NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDV-GSFIK 142 (351)
T ss_pred HhC------CCcccEEEecCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCH-HHHHH
Confidence 985 788999999999999999999997 899999997 56555 234578999 99999
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK 261 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (463)
.+++. ++|+|++++||||||.+++.+++.+|++ +++.++|+||+|.++ + + ....+. + +.
T Consensus 143 ~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~-~-~-~~~~~~--~--------~~ 201 (351)
T PRK14807 143 VIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEF-Y-G-NTIVDV--I--------NE 201 (351)
T ss_pred Hhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhh-c-c-cchHHH--h--------hh
Confidence 98753 7999999999999999999888877765 556789999999875 3 2 222121 1 22
Q ss_pred CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 262 EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 262 ~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
.+++|+++||||+| |+||+|+||++ +++++++.+.+.+. .++++.+.|.++..++++ .+.++.
T Consensus 202 ~~~vi~~~S~SK~~-~~~GlRiG~~v---~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~------------~~~~~~ 264 (351)
T PRK14807 202 FENLIVLRTLSKAF-GLAGLRVGYAV---ANENILKYLNLVKS-PYNINSLSQVIALKVLRT------------GVLKER 264 (351)
T ss_pred CCCEEEEecchHhc-ccchhceeeee---cCHHHHHHHHHccC-CCCcCHHHHHHHHHHHhH------------HHHHHH
Confidence 34799999999999 99999999999 69999999987766 466789999999998851 122334
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEG 421 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 421 (463)
.+.++++++.+.+.|++++|+.+.+ .+++|+|+++. . +.. +.+.|.++||.|+++..+.. .
T Consensus 265 ~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~--~-------------~~~-~~~~l~~~gV~v~~~~~~~~--~ 325 (351)
T PRK14807 265 VNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK--D-------------ADY-VYQGLLERGILVRDFSKVEG--L 325 (351)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC--C-------------HHH-HHHHHHHCCEEEEECCCCCC--C
Confidence 5567888889999998878887754 45678886553 1 233 45566678999998654322 2
Q ss_pred CcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 422 IFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 422 ~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
.+++||+++.. ++.+++++.|++++
T Consensus 326 ~~~iRis~~~~-~~~~~l~~~l~~~~ 350 (351)
T PRK14807 326 EGALRITVSSC-EANDYLINGLKELL 350 (351)
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHhh
Confidence 45899999954 66778888877653
No 91
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=311.75 Aligned_cols=301 Identities=19% Similarity=0.258 Sum_probs=244.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
|+.+.+++.+.+.. .+.||++ ...+|+++++++++. +++++|++++|+.+.|..++++++ .+||.|+++
T Consensus 37 ~~~~~~~~~~~~~~----~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~~l~~~~~-~~gd~vl~~ 105 (356)
T COG0079 37 PPKVIEAIRAALDK----LNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELIELLVRAFV-EPGDTVLIP 105 (356)
T ss_pred CHHHHHHHHHHHHh----hccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHHHHHHHHhh-cCCCEEEEc
Confidence 78888888777663 5789987 578999999999862 577899999999999999999998 999999996
Q ss_pred -------------cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 162 -------------FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 162 -------------~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
.|+++ +...|.+|+ +.+.+.+.+ ++++|++||||||||..++.++++++++.+.+ +
T Consensus 106 ~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~-~~~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~-~ 177 (356)
T COG0079 106 EPTFSMYEIAAQLAGAEVVKVPLKEFRLDL-DAILAAIRD------KTKLVFLCNPNNPTGTLLPREELRALLEALPE-G 177 (356)
T ss_pred CCChHHHHHHHHhcCCeEEEecccccccCH-HHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-C
Confidence 77665 333399999 999999987 79999999999999999999999999999988 9
Q ss_pred eEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh
Q 041151 226 LVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI 305 (463)
Q Consensus 226 ~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~ 305 (463)
.+||+||+|.+|.- .+...+. ....|+|+++||||.| |++|+|+||++ +++++++.+.+++.
T Consensus 178 ~~vVvDEAY~eF~~------~~~~~l~-------~~~~nlivlRTfSKa~-gLAGlRlGy~i---a~~~~i~~l~~vr~- 239 (356)
T COG0079 178 GLVVIDEAYIEFSP------ESSLELL-------KYPPNLIVLRTFSKAF-GLAGLRVGYAI---ANPELIAALNKVRP- 239 (356)
T ss_pred cEEEEeCchhhcCC------chhhhhc-------cCCCCEEEEEecHHhh-hcchhceeecc---CCHHHHHHHHHhcC-
Confidence 99999999999632 2222221 2234799999999999 99999999988 79999999999998
Q ss_pred cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhH
Q 041151 306 ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAI 384 (463)
Q Consensus 306 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~ 384 (463)
.|..+.+++.++.+++.+ .+++++.+....+.++.+.+.|+.++ +. +.++.+ .|++++++ ..
T Consensus 240 p~~v~~~a~~aa~aal~~-----------~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~a-NFvlv~~~--~~-- 302 (356)
T COG0079 240 PFNVSSPALAAAIAALRD-----------ADYLEESVERIREERERLYAALKALG-LFGVFPSQA-NFVLVRVP--DA-- 302 (356)
T ss_pred CCCCCHHHHHHHHHHccc-----------HHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCC-cEEEEECC--Cc--
Confidence 899999999999999863 24455678889999999999999984 55 566555 45554333 21
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
. ...+.+.|.++||.|+.+...+ ...+++||+++.. ++.++++++|++++++
T Consensus 303 ---------~-~~~l~~~L~~~giivR~~~~~~--~~~~~lRitvgt~-een~~ll~AL~~~~~~ 354 (356)
T COG0079 303 ---------E-AAALAEALLKKGILVRDCSSVG--LLPGYLRITVGTP-EENDRLLAALREVLKG 354 (356)
T ss_pred ---------c-HHHHHHHHHHCCEEEEeCCCCC--CCCCeEEEEeCCH-HHHHHHHHHHHHHHhc
Confidence 1 2335566778899999986622 2445999999987 4559999999888754
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6e-39 Score=319.97 Aligned_cols=288 Identities=13% Similarity=0.200 Sum_probs=225.9
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEEc-------------cCce
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVLL-------------FHTT 165 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlvp-------------~g~~ 165 (463)
...|+++. ..+||+++|++++ +++++|++|+|+++++..++.+++ ++| +.|+++ .|.+
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALYG------CAPEQLLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHhC------cChHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 46788765 6899999999985 788999999999999999999997 888 788886 5666
Q ss_pred e---c----CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccc
Q 041151 166 W---K----RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNI 238 (463)
Q Consensus 166 ~---~----~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~ 238 (463)
+ + .+++.+|+ +++++.+... ++++|+++|||||||.+++.+++++|+++|+ ++++||+||+|.++.
T Consensus 125 ~~~v~~~~~~~~~~~d~-~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~ 197 (364)
T PRK04781 125 LVEVPLVDGADGFHADV-PAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFS 197 (364)
T ss_pred EEEEecCCCccCCCcCH-HHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhc
Confidence 5 2 12466788 8887665432 7999999999999999999999999999986 479999999999976
Q ss_pred cCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHH
Q 041151 239 YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMG 318 (463)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~ 318 (463)
+ . . +...+. +..+++|+++||||+| |+||+|+||++ +++++++.+.+... .++.+.+.|.++.
T Consensus 198 ~-~-~---~~~~~~-------~~~~~vi~~~SfSK~~-gl~GlRvGy~v---~~~~l~~~l~~~~~-~~~~~~~~~~~a~ 260 (364)
T PRK04781 198 D-V-P---SAVGLL-------ARYDNLAVLRTLSKAH-ALAAARIGSLI---ANAELIAVLRRCQA-PYPVPTPCAALAE 260 (364)
T ss_pred C-C-c---chHHHH-------hhCCCEEEEecChhhc-ccccceeeeee---CCHHHHHHHHhccC-CCCCCHHHHHHHH
Confidence 5 1 1 222221 2335799999999999 99999999999 69999999998876 5778999999998
Q ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHH
Q 041151 319 LMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFY 398 (463)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (463)
.+|.+. .+.. ..+..+.++++++.+.+.|+.++|+....|.+++|+|++++ . ..+
T Consensus 261 ~~l~~~-----~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--~-------------~~~- 315 (364)
T PRK04781 261 QALSAP-----ALAV----TARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--D-------------AEA- 315 (364)
T ss_pred HHHhcc-----cHHH----HHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--C-------------HHH-
Confidence 888632 1212 22344568889999999999887875455777899996553 1 233
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 399 CLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 399 ~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
+.+.+.++||.|+||..|+. ..+++||+++.. ++++++++.|+++.
T Consensus 316 ~~~~l~~~gI~v~~~~~~~~--~~~~~Ris~~~~-~~~~~l~~al~~~~ 361 (364)
T PRK04781 316 AFQALLAAGVVVRDQRAAPR--LSDALRITLGTP-EQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHCCeEEeeCCCCCC--CCCeEEEeCCCH-HHHHHHHHHHHHHH
Confidence 45667889999999987753 245899999965 67888888887653
No 93
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-38 Score=317.53 Aligned_cols=309 Identities=18% Similarity=0.155 Sum_probs=240.8
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
+++++|+.|.|.. +. |+.+++++.+.+.. ...|++.. ..+||++|+
T Consensus 43 ~~~i~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~----~~~Y~~~~-~~~Lr~aia 88 (370)
T PRK09105 43 EGAVFLNANECPL------------------------GP-----SPAARDAAARSAAL----SGRYDLEL-EDDLRTLFA 88 (370)
T ss_pred CCcEEecCCCCCC------------------------CC-----CHHHHHHHHHHHHH----hcCCCCch-HHHHHHHHH
Confidence 3479999998775 43 88899988877654 24687764 899999999
Q ss_pred HHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHHHH
Q 041151 118 EFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIINDLQ 180 (463)
Q Consensus 118 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~l~ 180 (463)
++++ +++++|++|+|+++++..++.+++ ++||.|+++ .|+++ ...++.+|+ +.++
T Consensus 89 ~~~~------v~~e~I~it~Gs~~ai~~~~~~l~-~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~ 160 (370)
T PRK09105 89 AQEG------LPADHVMAYAGSSEPLNYAVLAFT-SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDV-KAML 160 (370)
T ss_pred HHhC------cChhhEEEcCChHHHHHHHHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCH-HHHH
Confidence 9875 789999999999999999999998 899999997 66665 234577899 9998
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCC
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFS 260 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (463)
+. .+ ++++|++||||||||.+++.+++++|++.++ ++++||+||+|.++.. . .+...+. +
T Consensus 161 ~~-~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~---~--~s~~~~~-------~ 220 (370)
T PRK09105 161 AA-DP------NAGLIYICNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSD---A--PSVVDLV-------A 220 (370)
T ss_pred hc-CC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHhcc---C--cchHHHH-------h
Confidence 76 33 6899999999999999999999999999764 5999999999987532 1 2333332 2
Q ss_pred CCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Q 041151 261 KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKG 340 (463)
Q Consensus 261 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (463)
...++|+++||||+| |++|+|+||++ +++++++.+.+. . ...++.+.|.++..++.+ ..+.++
T Consensus 221 ~~~~vi~~~SfSK~~-g~~GlRiG~~v---~~~~~i~~l~~~-~-~~~~~~~~~~aa~~~L~~-----------~~~~~~ 283 (370)
T PRK09105 221 QRKDLIVLRTFSKLY-GMAGMRLGLAA---ARPDLLAKLARF-G-HNPLPVPAAAAGLASLRD-----------PKLVPQ 283 (370)
T ss_pred hCCCEEEEecccHhh-cCCccceeeee---cCHHHHHHHHhc-C-CCCcCHHHHHHHHHHHhC-----------HHHHHH
Confidence 234799999999999 99999999999 689999998877 3 455788888888888752 233455
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC
Q 041151 341 ILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE 420 (463)
Q Consensus 341 ~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 420 (463)
.++.++++++.+.+.|++. |+.+.+++++||+ ++++ . ++.++...++ ++||.+ +..|+.
T Consensus 284 ~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~~-~~~~--~------------~~~~l~~~L~-~~gI~v--~~~~~~-- 342 (370)
T PRK09105 284 RRAENAAVREDTIAWLKKK-GYKCTPSQANCFM-VDVK--R------------PAKAVADAMA-KQGVFI--GRSWPI-- 342 (370)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEEE-EeCC--C------------CHHHHHHHHH-HCCcEE--ecCCCC--
Confidence 6778999999999999997 8888888898875 4443 1 2455555555 569998 444532
Q ss_pred CCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 421 GIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 421 ~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
..+++||+++. +++++++++.|++++
T Consensus 343 ~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 343 WPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred CCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 34599999995 467888888887664
No 94
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=300.07 Aligned_cols=338 Identities=18% Similarity=0.198 Sum_probs=267.4
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCC-CCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCc
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYP-SDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHT 164 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~ 164 (463)
...+|++..|.++|...+.++.+.....+ ...-+|++|+|.+.++..+++.++ ++||.|+++ .|+
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~AL~s~~a~gv 170 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSALQSMEALGV 170 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHHHHhccccCc
Confidence 45899999999999999999654222223 333499999999999999999998 999999997 666
Q ss_pred ee---cCCCcccChHHHHHHHHHHHHhc---CCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccccc
Q 041151 165 TW---KRQQIGVLIINDLQQSVAQARSK---GITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQN 237 (463)
Q Consensus 165 ~~---~~~~~~~d~~~~l~~~l~~~~~~---~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~ 237 (463)
++ ..+..++++ |.|++.+.+.... .++++++|.. +-+||||.++|.+.+++|.++|++||++||+||.|..+
T Consensus 171 ~~ipv~md~~Gi~p-E~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 171 KIIPVKMDQDGIDP-ESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred eEEeccccCCCCCH-HHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 55 677899999 9999998765332 2457776655 77999999999999999999999999999999999999
Q ss_pred ccCC-------CCCccchHHH----HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h
Q 041151 238 IYQD-------ERPFVSSKKV----LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I 305 (463)
Q Consensus 238 ~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 305 (463)
.|+. +.+..+...+ .+.+ +.-+.++|||...||||.++ ||+|+||+. +++-+++++-.... .
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sf-lslDtdGrVIr~dSFSKiia--PGlRlG~it---~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSF-LSLDTDGRVIRNDSFSKIIA--PGLRLGWIT---GNSLFLKRILDLAEVA 323 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCc-ccccccccEEeccchhhhhc--CcceeEEee---cCHHHHHHHhhhccee
Confidence 8842 2222231122 2222 11177889999999999984 999999999 78888888877776 6
Q ss_pred cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC--cccccCCceeEEeeeccCChh
Q 041151 306 ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS-CRN--VVCNFTEGAMYSFPQIRLPPK 382 (463)
Q Consensus 306 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~pg--~~~~~~~g~~~~~~~~~~~~~ 382 (463)
+.+++.+.|.++.++++. +.-+-+++|..+++..|..|++++..+|.+ +|+ +.+++|.+|+|+|+.++.+.
T Consensus 324 t~~pSg~sq~iv~a~l~~-----wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~- 397 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKR-----WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYIN- 397 (472)
T ss_pred ecCcccccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccc-
Confidence 778999999999999863 333556788889999999999999999987 564 67789999999997665221
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCc----EEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIF----HLRTTIL-PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~----~lRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
..+...+++-.+.....+.+.||.+.+|+.|...+... ++|++++ .+.|+++++++|+..+++++...
T Consensus 398 ---~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 398 ---FDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred ---cccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 11112222346677788999999999999997653332 9999999 88899999999999999987653
No 95
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-38 Score=314.57 Aligned_cols=283 Identities=14% Similarity=0.154 Sum_probs=215.4
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE-c-----------cCcee-
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL-L-----------FHTTW- 166 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv-p-----------~g~~~- 166 (463)
...|+++. ..+||+++|++++ +++++|++|+|++++|..++. ++ +||+.|++ | .|+++
T Consensus 34 ~~~Yp~~~-~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~-~~-~~~~vv~~~P~y~~y~~~~~~~G~~v~ 104 (332)
T PRK06425 34 ISIYPEIS-YTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLS-YI-NVGNIIIVEPNFNEYKGYAFTHGIRIS 104 (332)
T ss_pred cccCcCcC-HHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHH-Hh-CCCcEEEeCCChHHHHHHHHHcCCeEE
Confidence 35687664 7899999999997 789999999999999999997 45 78875555 2 67776
Q ss_pred --cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCC
Q 041151 167 --KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERP 244 (463)
Q Consensus 167 --~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~ 244 (463)
+.+.++.|. +.+++ . ++|+|++||||||||.++|.+++++|+++|++++++||+||+|.++.+ ++.
T Consensus 105 ~vp~~~~~~~~-~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~-~~~- 172 (332)
T PRK06425 105 ALPFNLINNNP-EILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVP-NRA- 172 (332)
T ss_pred EEeCCcccCcH-HHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccc-ccc-
Confidence 434455665 65542 2 789999999999999999999999999999999999999999999876 221
Q ss_pred ccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Q 041151 245 FVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPL 324 (463)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~ 324 (463)
.+...+. ...+++|+++||||+| |+||+|+||++ +++++++.+.+... .+..+.+.+.++...
T Consensus 173 -~~~~~~~-------~~~~~vi~~~SfSK~~-~l~GlRiGy~v---~~~~li~~l~~~~~-~~~~~~~~~~~l~~~---- 235 (332)
T PRK06425 173 -EEDVLLN-------RSYGNVIIGRSLTKIL-GIPSLRIGYIA---TDDYNMKISRKITE-PWSVCDPAIDFIRSI---- 235 (332)
T ss_pred -hhHHHHh-------ccCCCEEEEeecHHhc-CCchhhheeee---cCHHHHHHHHHcCC-CCccCHHHHHHHHHh----
Confidence 2333332 2335899999999999 99999999999 69999999988665 344454443332211
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHH
Q 041151 325 KPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLE 404 (463)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 404 (463)
. ...+.++.++.|+++++.+.+.|++. |+.+..+.++.|+|+.++ . +.++... |.
T Consensus 236 -----~---~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--~-------------~~~~~~~-l~ 290 (332)
T PRK06425 236 -----D---LDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--D-------------AHDFYSY-LL 290 (332)
T ss_pred -----h---hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--C-------------HHHHHHH-HH
Confidence 1 12234457888999999999999998 787765456677885543 1 4455545 45
Q ss_pred hcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 405 ATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 405 ~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
++||.|+||+.|+.. +.+++||+++.. +++++++++|++++
T Consensus 291 ~~gi~v~~~~~f~~~-~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 291 KNGILVRLLDDYECL-GEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred HCCeEEEECCCCCCC-CCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 679999999999742 456999999975 68999999998764
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=6e-38 Score=311.31 Aligned_cols=311 Identities=18% Similarity=0.250 Sum_probs=247.2
Q ss_pred ccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHH
Q 041151 38 KKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVA 117 (463)
Q Consensus 38 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 117 (463)
.++|||+.|+++. +. |+.+++++.+++.. ...|+++.+ .++|+++|
T Consensus 19 ~~~i~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~----~~~y~~~~~-~~lr~~ia 64 (346)
T TIGR01141 19 KEVIKLNSNENPF------------------------GP-----PPKAKEALRAEADK----LHRYPDPDP-AELKQALA 64 (346)
T ss_pred CceEEccCCCCCC------------------------CC-----CHHHHHHHHHhHHH----hhcCCCCCH-HHHHHHHH
Confidence 4699999999875 44 88899999887643 367888776 89999999
Q ss_pred HHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHHHH
Q 041151 118 EFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIINDLQ 180 (463)
Q Consensus 118 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~l~ 180 (463)
++++ +++++|++|+|+++++..++.+++ ++||+|+++ .|.++ ....+.+|+ +.++
T Consensus 65 ~~~~------~~~~~i~~~~G~~~~l~~~~~~l~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~-~~l~ 136 (346)
T TIGR01141 65 DYYG------VDPEQILLGNGSDEIIELLIRAFL-EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDL-EDIL 136 (346)
T ss_pred HHhC------cChHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCH-HHHH
Confidence 9996 778999999999999999999997 899999997 56665 233466899 9999
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCC
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFS 260 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (463)
+.+.+ ++++|++++||||||.+++.+++.++++.++ +++++|+||+|..+.+ .+ . ..... .
T Consensus 137 ~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~-~~-~---~~~~~-------~ 197 (346)
T TIGR01141 137 VAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSG-EP-S---TLPLL-------A 197 (346)
T ss_pred HhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcC-Cc-c---HHHHH-------h
Confidence 98755 7999999999999999999999999999887 7999999999997654 21 1 11111 1
Q ss_pred CCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Q 041151 261 KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKG 340 (463)
Q Consensus 261 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (463)
...++|+++|+||+| |++|+|+||++ .++++++.+..... .++.+.+.|.++..+++. ..+.++
T Consensus 198 ~~~~~i~~~S~sK~~-g~~G~r~G~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-----------~~~~~~ 261 (346)
T TIGR01141 198 EYPNLIVLRTLSKAF-GLAGLRIGYAI---ANAEIIDALNKVRA-PFNLSRLAQAAAIAALRD-----------DDFIEK 261 (346)
T ss_pred hCCCEEEEehhhHhh-hchhhhceeee---cCHHHHHHHHhccC-CCCCCHHHHHHHHHHhCC-----------HHHHHH
Confidence 123689999999999 88999999999 58899999887765 567789999999888852 113456
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC
Q 041151 341 ILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE 420 (463)
Q Consensus 341 ~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 420 (463)
.++.++++++.+.+.|++++|+.+. |.+++|+|+.++ . ++.++. +.|.++||.+.||..|+..
T Consensus 262 ~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~--~------------~~~~~~-~~L~~~gI~v~~g~~f~~~- 324 (346)
T TIGR01141 262 TVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFP--R------------DADALF-EALLEKGIIVRDLNSYPGL- 324 (346)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecC--C------------CHHHHH-HHHHHCCeEEEeCCCcCCC-
Confidence 7888999999999999988888854 456788886544 1 144554 4566789999999988643
Q ss_pred CCcEEEEEecCCcCcHHHHHHHHH
Q 041151 421 GIFHLRTTILPAEEDMPAIMESFK 444 (463)
Q Consensus 421 ~~~~lRis~~~~~e~i~~~~~~l~ 444 (463)
.+++|+|++ ++++++++++.|+
T Consensus 325 -~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 325 -PNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred -CCeEEEecC-CHHHHHHHHHHhC
Confidence 568999998 5678888887763
No 97
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-37 Score=311.13 Aligned_cols=336 Identities=18% Similarity=0.256 Sum_probs=250.5
Q ss_pred hhhhhhhccchhhhh-HHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHH
Q 041151 11 MNENVKKVQYAVRGE-LYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARA 89 (463)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~ 89 (463)
+-+++..+++..... +....+++..+++++|+|+.|+++. +. ++.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~ 56 (361)
T PRK00950 6 IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPL------------------------GP-----SPKAVEAI 56 (361)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCC------------------------CC-----CHHHHHHH
Confidence 334555555543322 3444444444556899999998774 32 77788888
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEE-cCCcHHHHHHHHHHHhcCCCCEEEEc-------
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFL-TDGASKGVMQTLNCVIRGEGDGVVLL------- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~~gd~Vlvp------- 161 (463)
.+.+.. ...|+++.+ +++|+++|++++ +++++|++ |+|+++++..++.+++ ++||.|+++
T Consensus 57 ~~~~~~----~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~~Ga~~~i~~~~~~~~-~~gd~vlv~~p~y~~~ 124 (361)
T PRK00950 57 EKELSK----IHRYPEPDA-PELREALSKYTG------VPVENIIVGGDGMDEVIDTLMRTFI-DPGDEVIIPTPTFSYY 124 (361)
T ss_pred HHHHHh----hcCCCCCCH-HHHHHHHHHHhC------CCHHHEEEeCCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHH
Confidence 776654 356877654 899999999985 78899999 7899999999999997 899999986
Q ss_pred ------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|.++ ...++++|+ +.+++.+.+ ++++|++++||||||.+++.+++.+|+ ++++++||+|
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~-~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~---~~~~~~li~D 194 (361)
T PRK00950 125 EISAKAHGAKPVYAKREEDFSLDV-DSVLNAITE------KTKVIFLCTPNNPTGNLIPEEDIRKIL---ESTDALVFVD 194 (361)
T ss_pred HHHHHHcCCEEEEeecCCCCCcCH-HHHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHHHHHH---HHCCcEEEEE
Confidence 56665 344578999 999998876 789999999999999999987766654 5789999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCCh
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNV 311 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~ 311 (463)
|+|.++.. .. ...+. ...+++++++||||++ |+||+|+||++ +++++++.+.+... .++.+.
T Consensus 195 e~y~~~~~---~~---~~~~~-------~~~~~vi~~~S~SK~~-g~~GlRiG~~~---~~~~~~~~~~~~~~-~~~~~~ 256 (361)
T PRK00950 195 EAYVEFAE---YD---YTPLA-------LEYDNLIIGRTFSKVF-GLAGLRIGYGF---VPEWLIDYYMRAKT-PFSLTR 256 (361)
T ss_pred CchhhhCc---cc---hHHHH-------HhcCCEEEEEeehHhh-cCchhhcchhc---CCHHHHHHHHHhcC-CCCCCH
Confidence 99987631 11 22222 2224789999999999 99999999999 68999999888776 456788
Q ss_pred HHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 312 PAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 312 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
+.|.++..++.+ ..+.++.++.++++++.+.+.|. +.+ .+.+++|+|++++ .
T Consensus 257 ~~~~~a~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~--~---------- 308 (361)
T PRK00950 257 LSQAAAIAALSD-----------KEYIEKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDVT--P---------- 308 (361)
T ss_pred HHHHHHHHHhcC-----------HHHHHHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEECC--C----------
Confidence 999988888752 12234456778888888888775 343 3567789996662 1
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHH
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFN 447 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l 447 (463)
.++.+++.. |.++||.++||..|+. .+.+++|||++. .+++++++++|++++
T Consensus 309 -~~~~~~~~~-l~~~gv~v~~~~~f~~-~~~~~lRis~~~-~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -MTAKEFCEE-LLKRGVIVRDCTSFRG-LGDYYIRVSIGT-FEENERFLEILKEIV 360 (361)
T ss_pred -CCHHHHHHH-HHHCCEEEeeCCccCC-CCCCeEEEECCC-HHHHHHHHHHHHHHh
Confidence 124555555 5567999999998864 345699999994 468999999998765
No 98
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-38 Score=313.44 Aligned_cols=283 Identities=17% Similarity=0.264 Sum_probs=222.5
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEEc-------------cCc
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVLL-------------FHT 164 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlvp-------------~g~ 164 (463)
....|++.. ...|+++++++++ +++++|++|+|++++|..++.+++ ++| |.|+++ .|+
T Consensus 50 ~~~~Yp~~~-~~~l~~~~a~~~g------~~~~~I~~~~Gs~e~i~~~~~~~~-~~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 50 TLNRYPECQ-PKAVIENYAAYAG------VKPEQVLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred ccccCCCCC-hHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 346788765 4799999999986 789999999999999999999997 887 888886 666
Q ss_pred ee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 165 TW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 165 ~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
++ ...++++|+ +.+++++ + ++++|++||||||||.+++.+++++|++.|++ +++||+||+|.++..
T Consensus 122 ~~~~v~~~~~~~~d~-~~l~~~~-~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~- 191 (351)
T PRK01688 122 EIRTVPTLDNWQLDL-PAIADNL-D------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCP- 191 (351)
T ss_pred EEEEeecCCCCCCCH-HHHHHhc-c------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCC-
Confidence 66 234589999 9999877 3 68999999999999999999999999999986 688999999998643
Q ss_pred CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHh
Q 041151 241 DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLM 320 (463)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~ 320 (463)
. .+...+. ....++|+++||||+| |++|+|+||++ +++++++.+.+... .++++.+.|.++..+
T Consensus 192 -~---~s~~~~~-------~~~~n~iv~rSfSK~~-glaGlRiGy~i---~~~~~i~~l~~~~~-~~~v~~~~~~~a~~~ 255 (351)
T PRK01688 192 -Q---ASLAGWL-------AEYPHLVILRTLSKAF-ALAGLRCGFTL---ANEEVINLLLKVIA-PYPLSTPVADIAAQA 255 (351)
T ss_pred -C---CChHHHH-------hhCCCEEEEecchHhh-cCHHHHHhHHh---CCHHHHHHHHhccC-CCCCCHHHHHHHHHH
Confidence 1 1333332 2234799999999999 99999999999 69999999988776 567888888888888
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHH
Q 041151 321 VNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCL 400 (463)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (463)
|.+. ..++.++.++.++++++.+.+.|++++|+....|.++.|+|+++. . +.++.
T Consensus 256 L~~~---------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--~-------------~~~l~- 310 (351)
T PRK01688 256 LSPQ---------GIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--A-------------SSAVF- 310 (351)
T ss_pred Hhcc---------hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--C-------------HHHHH-
Confidence 7521 123344566778889999999999887776455667778886543 1 34444
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHH
Q 041151 401 RLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESF 443 (463)
Q Consensus 401 ~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l 443 (463)
+.|.++||.|+++..|.. ..+++|||++.. +++++++++|
T Consensus 311 ~~L~~~gi~vr~~~~~~~--~~~~iRis~~~~-~e~~~l~~al 350 (351)
T PRK01688 311 KSLWDQGIILRDQNKQPG--LSNCLRITIGTR-EECQRVIDAL 350 (351)
T ss_pred HHHHHCCeEEEECCCcCC--CCCeEEEeCCCH-HHHHHHHHhh
Confidence 445678999998776532 234899999954 8888888876
No 99
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=275.22 Aligned_cols=360 Identities=18% Similarity=0.227 Sum_probs=273.0
Q ss_pred chhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH-HHhhhcC-
Q 041151 20 YAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK-HYLSLTS- 97 (463)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~-~~~~~~~- 97 (463)
.+-|..++....+--+++. .|+|+.|+|.. .|. -...++-+. +.+.+..
T Consensus 13 ~sGi~~lMdDl~d~Lrt~g-~imLggGNPa~-----------------------iPe-----m~~~f~~~~aemla~~~~ 63 (417)
T COG3977 13 HSGITQLMDDLNDGLRTPG-AIMLGGGNPAR-----------------------IPE-----MDDYFQDLLAEMLASGKA 63 (417)
T ss_pred hhhHHHHHHHHHhhccCCC-ceeeCCCCccc-----------------------Chh-----HHHHHHHHHHHHHhcchH
Confidence 4556777777666555544 89999999984 122 122222222 2222210
Q ss_pred -CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--cCCC--CEEEEc----------c
Q 041151 98 -GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI--RGEG--DGVVLL----------F 162 (463)
Q Consensus 98 -~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~~g--d~Vlvp----------~ 162 (463)
...-.|..++|...|.++++++++++||+.+++.+|.+|+|++.+.+.++..+. +..| ..|+.| .
T Consensus 64 ~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~ 143 (417)
T COG3977 64 TEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA 143 (417)
T ss_pred HHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccc
Confidence 145789999999999999999999999999999999999999999999999885 1223 468887 1
Q ss_pred Ccee-------------c--CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeE
Q 041151 163 HTTW-------------K--RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLV 227 (463)
Q Consensus 163 g~~~-------------~--~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ 227 (463)
|... + ...+.+|+ ++|+-. + ++.+|.++.|.||||.+++.+|+.+|.++|++||+.
T Consensus 144 ~l~~d~fVs~kP~iel~~~g~FKY~vDF-~~l~i~--e------~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giP 214 (417)
T COG3977 144 GLEEDLFVSAKPNIELLPAGQFKYHVDF-EHLHIG--E------STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIP 214 (417)
T ss_pred ccCccceeeccCCcccccccceeeccCH-HHcccc--c------ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCc
Confidence 1111 2 22456788 777543 2 789999999999999999999999999999999999
Q ss_pred EEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hc
Q 041151 228 LLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IA 306 (463)
Q Consensus 228 vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~ 306 (463)
+|+|.+|..- | ++- -+....+ --..|+|.|.|+|| + |+||.|+|.++ +++++++++..+.. .+
T Consensus 215 liIDnAYg~P-F-P~i---ifsd~~~------~w~~NiilC~SLSK-~-GLPG~R~GIiI---ane~viqaitnmn~iis 278 (417)
T COG3977 215 LIIDNAYGVP-F-PGI---IFSDATP------LWNENIILCMSLSK-L-GLPGSRCGIII---ANEKVIQAITNMNGIIS 278 (417)
T ss_pred EEEecccCCC-C-Cce---ecccccc------cCCCCEEEEeehhh-c-CCCCcceeEEE---ccHHHHHHHHhccceee
Confidence 9999999853 2 111 1212111 12348999999999 5 99999999999 79999999999987 78
Q ss_pred ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC--CcccccCCceeEEeeecc-CChh
Q 041151 307 LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS-CR--NVVCNFTEGAMYSFPQIR-LPPK 382 (463)
Q Consensus 307 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~p--g~~~~~~~g~~~~~~~~~-~~~~ 382 (463)
..+++..+++++.++++.. ..+..+ +-++..|+++.+...+.|++ +| -+.++.|+|..|+|++++ +|-
T Consensus 279 Lap~~~G~Aia~~mie~gd-----l~rlse--qVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI- 350 (417)
T COG3977 279 LAPGRMGPAIAAEMIESGD-----LLRLSE--QVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI- 350 (417)
T ss_pred ecCCCccHHHHHHHhhcch-----HHHHHH--HhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC-
Confidence 8999999999999998643 222222 24777888887777777765 34 367789999999999985 553
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC------CCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK------EGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~------~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
+...+.+.|++.||++.||..|... +.+.++|+++..++++++.++++|++.+++..++
T Consensus 351 ------------tt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 351 ------------TTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred ------------CHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 2344678899999999999998652 3456899999988899999999999999887764
No 100
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.5e-37 Score=306.45 Aligned_cols=311 Identities=18% Similarity=0.237 Sum_probs=240.4
Q ss_pred cceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHH
Q 041151 39 KIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAE 118 (463)
Q Consensus 39 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 118 (463)
++|+|+.|.|.. +. |+.+.+++.+.+.. ...|++ .|..++|+++|+
T Consensus 23 ~~i~l~~~~~~~------------------------~~-----~~~~~~a~~~~~~~----~~~y~~-~g~~~lr~~ia~ 68 (352)
T PRK03321 23 GAIKLSSNETPF------------------------GP-----LPSVRAAIARAAAG----VNRYPD-MGAVELRAALAE 68 (352)
T ss_pred cceeccCCCCCC------------------------CC-----CHHHHHHHHHHHHh----cCcCCC-CcHHHHHHHHHH
Confidence 589999998874 32 77888888777653 356764 699999999999
Q ss_pred HHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cCC-CcccChHHHHHH
Q 041151 119 FIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KRQ-QIGVLIINDLQQ 181 (463)
Q Consensus 119 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~~-~~~~d~~~~l~~ 181 (463)
+++ +++++|++|+|+++++..++..++ +|||.|++| .|.++ +.+ .+++|+ +.+++
T Consensus 69 ~~~------~~~~~I~~~~G~~~~l~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~l~~ 140 (352)
T PRK03321 69 HLG------VPPEHVAVGCGSVALCQQLVQATA-GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDL-DAMAA 140 (352)
T ss_pred HhC------cCHHHEEECCCHHHHHHHHHHHhc-CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCH-HHHHH
Confidence 996 788899999999999999999997 899999997 46655 322 578999 99999
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK 261 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (463)
.+++ ++++|++++||||||.+++.+++.++++.+ +++++||+||+|.++.++ +....++... +.
T Consensus 141 ~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~-~~~~~~~~~~--------~~ 204 (352)
T PRK03321 141 AITD------RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRD-DDVPDGLELV--------RD 204 (352)
T ss_pred hhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccC-cCCCcHHHHH--------hh
Confidence 8876 799999999999999999999999988876 479999999999998873 3322233222 33
Q ss_pred CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 262 EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 262 ~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
.+++|+++||||.| |+||+|+||++ +++++++.+.+... .++++.+.|.++.+++.. ...+.+ .
T Consensus 205 ~~~vi~~~S~SK~~-g~~GlRiG~~v---~~~~~~~~~~~~~~-~~~~s~~~q~~a~~~l~~-------~~~~~~----~ 268 (352)
T PRK03321 205 HPNVVVLRTFSKAY-GLAGLRVGYAV---GHPEVIAALRKVAV-PFSVNSLAQAAAIASLAA-------EDELLE----R 268 (352)
T ss_pred CCCEEEEecchHHh-hhHHHhhhhhc---CCHHHHHHHHHhcC-CCCCCHHHHHHHHHHhcC-------HHHHHH----H
Confidence 34799999999999 89999999999 68999999987754 678899999988888752 112222 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEG 421 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 421 (463)
.+.+.++++.+.+.|++. |+.+.+ .+++|+|+++. . ++.++.. .|+++||.+.+ |+.
T Consensus 269 ~~~~~~~r~~~~~~L~~~-~~~~~~-~~g~~i~i~l~--~------------~~~~~~~-~l~~~gI~v~~---~~~--- 325 (352)
T PRK03321 269 VDAVVAERDRVRAALRAA-GWTVPP-SQANFVWLPLG--E------------RTADFAA-AAAEAGVVVRP---FAG--- 325 (352)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccCC-CCCCEEEEeCC--C------------CHHHHHH-HHHHCCEEEEc---cCC---
Confidence 333455567788889887 776544 45788996553 1 1345544 46789999987 432
Q ss_pred CcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 422 IFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 422 ~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.++||+++.. +++++++++|+++++
T Consensus 326 -~~iRi~~~~~-~~~~~~~~al~~~~~ 350 (352)
T PRK03321 326 -EGVRVTIGAP-EENDAFLRAARAWRA 350 (352)
T ss_pred -CcEEEeeCCH-HHHHHHHHHHHHHhc
Confidence 2599999754 799999999988764
No 101
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-37 Score=301.23 Aligned_cols=301 Identities=18% Similarity=0.243 Sum_probs=225.5
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
.++++++|+.|+|++ +. |+.+++++.+++.. .....|+++ |.++||++
T Consensus 17 ~~~~~i~l~~~~~~~------------------------~~-----p~~~~~~~~~~~~~--~~~~~Y~~~-~~~~Lr~a 64 (335)
T PRK14808 17 EKRDRTYLALNENPF------------------------PF-----PEDLVDEVFRRLNS--DTLRIYYDS-PDEELIEK 64 (335)
T ss_pred CCCceeEecCCCCCC------------------------CC-----CHHHHHHHHHHhhh--hhhhcCCCC-ChHHHHHH
Confidence 456799999999886 44 88999999877654 233457665 89999999
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cC-CCcccChHHH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KR-QQIGVLIIND 178 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~-~~~~~d~~~~ 178 (463)
+++|++++ + +++++|++|+|++++|..++.++ |.|+++ .|+++ +. ..+.++. ..
T Consensus 65 ia~~~~~~-~--~~~~~i~it~Ga~~~i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~ 135 (335)
T PRK14808 65 ILSYLDTD-F--LSKNNVSVGNGADEIIYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPE-VN 135 (335)
T ss_pred HHHHhCCC-C--CCcceEEEcCCHHHHHHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCCh-hH
Confidence 99999754 2 68999999999999999999876 447775 67776 22 2343443 21
Q ss_pred HHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCC
Q 041151 179 LQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLP 258 (463)
Q Consensus 179 l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 258 (463)
+ . ++++|+++|||||||.++|.+++++|+ +++++||+||+|.++. + ....+ ....
T Consensus 136 ----~-~------~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~-~~~~~---~~~~---- 190 (335)
T PRK14808 136 ----V-G------EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--G-ESYVD---LLKK---- 190 (335)
T ss_pred ----c-c------CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--C-CchHH---HHHh----
Confidence 1 2 579999999999999999999988886 4799999999999863 1 12212 2122
Q ss_pred CCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHH
Q 041151 259 FSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRES 338 (463)
Q Consensus 259 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 338 (463)
..++|+++||||+| |++|+|+||++ +++++++.+.+.+. .++++.+.|.++..+++. ..+.
T Consensus 191 ---~~~vi~~~S~SK~~-~l~GlRvG~~v---~~~~~~~~l~~~~~-~~~~~~~~q~a~~~~l~~-----------~~~~ 251 (335)
T PRK14808 191 ---YENLAVIRTFSKAF-SLAAQRIGYVV---SSEKFIDAYNRVRL-PFNVSYVSQMFAKVALDH-----------REIF 251 (335)
T ss_pred ---CCCEEEEEechhhc-cCcccceEEEE---eCHHHHHHHHHhcC-CCCCCHHHHHHHHHHHhC-----------HHHH
Confidence 23799999999999 99999999999 68899999987774 577889999999888742 1223
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 339 KGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 339 ~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
.+.++.+.++++.+.+.|++. |+.+.+|+|+ |+|+.++ .. +. ..+...|.++||.|+. |.
T Consensus 252 ~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~--~~-----------~~-~~~~~~l~~~Gi~V~~---~~- 311 (335)
T PRK14808 252 EERTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFME--KE-----------EK-ERLLEHLRAKNIAVRS---FR- 311 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCC--Cc-----------cH-HHHHHHHHHCCeEEEE---CC-
Confidence 345567778888999999988 8888777665 5575443 21 13 3345667889999995 32
Q ss_pred CCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 419 ~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
.++||+++.. ++++++++.|+++
T Consensus 312 ----~~~Risi~~~-~~~~~~~~~l~~~ 334 (335)
T PRK14808 312 ----EGVRITIGKR-EENDMILKELEVF 334 (335)
T ss_pred ----CCeEEecCCH-HHHHHHHHHHHhh
Confidence 3799999975 7888888887643
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-37 Score=304.45 Aligned_cols=280 Identities=15% Similarity=0.250 Sum_probs=217.3
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEEc-------------cCce
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVLL-------------FHTT 165 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlvp-------------~g~~ 165 (463)
...|++. +..+||+++|++++ +++++|++|+|++++|..++.+++ ++| |.|+++ .|++
T Consensus 54 ~~~Yp~~-~~~~Lr~aia~~~~------~~~~~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~~y~~~~~~~g~~ 125 (354)
T PRK04635 54 LNRYPEC-QPPELINAYSAYAG------VAPEQILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYGMYAISAETFNVG 125 (354)
T ss_pred hccCCCC-CHHHHHHHHHHHhC------cCHHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 4679876 47999999999985 889999999999999999999997 888 899986 5666
Q ss_pred e---c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 166 W---K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 166 ~---~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
+ + ..++.+|. +.++. + + ++|+|++||||||||.+++.+++.+|+++|+ +++||+||+|.++..
T Consensus 126 v~~v~~~~~~~~~~-~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~-- 192 (354)
T PRK04635 126 VKALPLTADYQLPL-DYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCP-- 192 (354)
T ss_pred EEEEecCCCCCCCH-HHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhcc--
Confidence 5 2 23578888 88863 3 3 7999999999999999999999999999876 499999999998643
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhc
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMV 321 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l 321 (463)
. .+...+. ....++|+++||||+| |++|+|+||++ +++++++.+.+... .++.+.+.|.++..++
T Consensus 193 ~---~s~~~~~-------~~~~~~iv~~S~SK~~-~l~GlRlG~~i---~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~l 257 (354)
T PRK04635 193 E---YSVADLL-------ASYPNLVVLRTLSKAF-ALAGARCGFTL---ANEELIEILMRVIA-PYPVPLPVSEIATQAL 257 (354)
T ss_pred C---cchHHHH-------hhCCCEEEEechHHHh-hhhHHHHhhhh---CCHHHHHHHHhhcC-CCCCCHHHHHHHHHHH
Confidence 1 1333322 2234789999999999 99999999999 69999999887655 5677888888888887
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHH
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLR 401 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (463)
.+.. .++.++.++.++++++.+.+.|++++++.+.+++| .|+|++++ . ..+ +.+
T Consensus 258 ~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~~~~~~--~-------------~~~-~~~ 311 (354)
T PRK04635 258 SEAG---------LARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNG-NYVLAKFD--D-------------VDA-VFK 311 (354)
T ss_pred hccc---------HHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-cEEEEECC--C-------------HHH-HHH
Confidence 5311 12344566778999999999999986687777765 57775443 1 233 356
Q ss_pred HHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHH
Q 041151 402 LLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKK 445 (463)
Q Consensus 402 ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~ 445 (463)
+|.++||.++++..++ ..+++|||++. .+++++++++|++
T Consensus 312 ~l~~~gv~v~~~~~~~---~~~~lRis~~~-~e~~~~l~~al~~ 351 (354)
T PRK04635 312 ALWDAGIVARAYKDPR---LANCIRFSFSN-RAETDKLIGLIRN 351 (354)
T ss_pred HHHHCCEEEEECCCCC---CCCeEEEEeCC-HHHHHHHHHHHHH
Confidence 6788999998764432 33589999985 4788888877753
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.8e-36 Score=298.42 Aligned_cols=311 Identities=16% Similarity=0.147 Sum_probs=235.8
Q ss_pred HHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCC
Q 041151 26 LYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSD 105 (463)
Q Consensus 26 ~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~ 105 (463)
+...++++...++++++|+.|.|.. +. | ..+... .....|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~-----~--~~~~~~-------~~~~~y~~ 46 (330)
T TIGR01140 5 LRRAAARYGIPPEDWLDFSTGINPL------------------------GP-----P--VPPIPA-------SAWARYPD 46 (330)
T ss_pred HHHHHHHcCCChhheeEccccCCCC------------------------CC-----C--hhhcch-------HHHhhCCC
Confidence 4455566665667899999998664 21 2 211111 13467888
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee-cCCCc
Q 041151 106 SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW-KRQQI 171 (463)
Q Consensus 106 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~-~~~~~ 171 (463)
+.+ +++|++++++++ +++++|++|+|+++++..+..++ .+| .|+++ .|.++ ...
T Consensus 47 ~~~-~~lr~~la~~~~------~~~~~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-- 114 (330)
T TIGR01140 47 PEY-DELRAAAAAYYG------LPAASVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYSEYARAWRAAGHEVVELP-- 114 (330)
T ss_pred ccH-HHHHHHHHHHhC------CChhhEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--
Confidence 776 999999999985 67899999999999999987764 678 56665 55555 222
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
|+ +.+++.++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|..+.+ . .++...
T Consensus 115 --d~-~~l~~~~~-------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~----~~~~~~ 179 (330)
T TIGR01140 115 --DL-DRLPAALE-------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTP-D----ASLAPQ 179 (330)
T ss_pred --CH-HHHHhhcc-------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCC-c----cchhhH
Confidence 88 99998873 578999999999999999999999999999999999999999998754 1 133222
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchH
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISY 331 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 331 (463)
. +..+++|+++||||+| |++|+|+||++ +++++++.+..... .++++.+.|.++..++++.
T Consensus 180 ~-------~~~~~~i~~~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~~-~~~~s~~~q~~~~~~l~~~------- 240 (330)
T TIGR01140 180 A-------ARFPGLVVLRSLTKFF-GLAGLRLGFVV---AHPALLARLREALG-PWTVNGPARAAGRAALADT------- 240 (330)
T ss_pred h-------ccCCCEEEEEecchhh-cCchhhhhhee---CCHHHHHHHHhcCC-CCCchHHHHHHHHHHHhch-------
Confidence 1 2235799999999999 99999999999 58889999888765 5677899999999998631
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEee
Q 041151 332 EQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTV 411 (463)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~ 411 (463)
.+.+..++.++++++.+.+.|++++++.+. +.+++|+|++++ . ..++... |.++||.+.
T Consensus 241 ----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~--~-------------~~~l~~~-l~~~gi~v~ 299 (330)
T TIGR01140 241 ----AWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP--D-------------AAALHEA-LARRGILIR 299 (330)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC--C-------------HHHHHHH-HHHCCEEEE
Confidence 122346788999999999999998556654 457899996543 1 3455544 556899999
Q ss_pred CCCCCCCCCCCcEEEEEecCCcCcHHHHHHHH
Q 041151 412 PGSGFGQKEGIFHLRTTILPAEEDMPAIMESF 443 (463)
Q Consensus 412 pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l 443 (463)
||..|+.. +.+++||+++...++ +.++.+|
T Consensus 300 pg~~f~~~-~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 300 DFDNFPGL-DPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ECCCCCCC-CCCEEEEEecCHHHH-HHHHHhh
Confidence 99999642 345999999965444 6666665
No 104
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-36 Score=297.52 Aligned_cols=298 Identities=19% Similarity=0.275 Sum_probs=224.4
Q ss_pred cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHH
Q 041151 37 GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEV 116 (463)
Q Consensus 37 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 116 (463)
+.++|+|+.|.|.+ +. |+.+++++.+++... ....|++ .|.+.||+++
T Consensus 17 ~~~~i~l~~~~~~~------------------------~~-----~~~~~~~~~~~~~~~--~~~~Y~~-~g~~~lr~~i 64 (337)
T PRK03967 17 GNYRIWLDKNENPF------------------------DL-----PEELKEEIFEELKRV--PFNRYPH-ITSDPLREAI 64 (337)
T ss_pred CCceEEecCCCCCC------------------------CC-----CHHHHHHHHHHhhcC--ccccCCC-CCHHHHHHHH
Confidence 34679999998774 43 788999998877542 3567875 6999999999
Q ss_pred HHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cCCCcccChHHHH
Q 041151 117 AEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KRQQIGVLIINDL 179 (463)
Q Consensus 117 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~~~~~~d~~~~l 179 (463)
++|++ +++++|++|+|+++++..++..+ +||+|+++ .|+++ ...++++|+ +.+
T Consensus 65 a~~~~------~~~~~I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l 134 (337)
T PRK03967 65 AEFYG------LDAENIAVGNGSDELISYLVKLF---EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDG-ERI 134 (337)
T ss_pred HHHhC------cCcceEEEcCCHHHHHHHHHHHh---CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCH-HHH
Confidence 99996 78999999999999999887765 69999997 55555 234578999 999
Q ss_pred HHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCC
Q 041151 180 QQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPF 259 (463)
Q Consensus 180 ~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (463)
++.+ + +++++++++||||||.+++.+++.+++ +++++||+||+|.++.. . +.....
T Consensus 135 ~~~~-~------~~~~v~~~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~~~---~---~~~~~~------- 190 (337)
T PRK03967 135 AEKA-K------NASAVFICSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEFSG---K---SLIGLI------- 190 (337)
T ss_pred HHhc-c------CCCEEEEeCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhhcc---c---chHHHH-------
Confidence 8764 2 689999999999999999987777664 36999999999998642 1 121211
Q ss_pred CCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHH
Q 041151 260 SKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESK 339 (463)
Q Consensus 260 ~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (463)
....++|+++||||+| |+||+|+||++ +++++++.+.+... .++++.+.|.++..++++ .+ +..
T Consensus 191 ~~~~~vi~l~S~SK~~-~l~GlRiG~iv---~~~~~i~~~~~~~~-~~~~~~~~q~~~~~~l~~-------~~----~~~ 254 (337)
T PRK03967 191 DEYPNLILLRTFSKAF-GLAGIRAGYAI---ANEEIIDALYRIKP-PFSLNILTMKIVRLALDH-------YD----LIE 254 (337)
T ss_pred hhCCCEEEEecchHhh-cchhhhheeee---cCHHHHHHHHhhcC-CCCCCHHHHHHHHHHHhC-------HH----HHH
Confidence 2224799999999999 99999999999 68999999988776 567899999999999852 11 222
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 340 GILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 340 ~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
+.++.+.++++.+.+.|.+. ..|.+++|+|++++ ..+.|.++||.|+++...
T Consensus 255 ~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~--------------------~~~~l~~~gi~v~~~~~~--- 306 (337)
T PRK03967 255 ERIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD--------------------AYDYLLENGIVVRKLSGR--- 306 (337)
T ss_pred HHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH--------------------HHHHHHHCCEEEEeCCCC---
Confidence 33445566677888888764 24678899995432 224455689999986522
Q ss_pred CCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 420 EGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 420 ~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
..+++||+++.. ++.+++++.|+.+
T Consensus 307 -~~~~~Ri~~~~~-~~~~~l~~~l~~~ 331 (337)
T PRK03967 307 -LEGHIRVTVGKR-EENDEFIKALKEI 331 (337)
T ss_pred -CCCeEEEecCCH-HHHHHHHHHHHHH
Confidence 234899999954 5666777666554
No 105
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.1e-35 Score=292.77 Aligned_cols=267 Identities=15% Similarity=0.212 Sum_probs=203.5
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCceecC
Q 041151 102 AYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTWKR 168 (463)
Q Consensus 102 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~~~ 168 (463)
.|+.. ...||++|+++++ +++|++|+|++++|..++ ++ .+||+|+++ .|+++
T Consensus 46 ~yp~~--~~~Lr~~ia~~~~--------~~~I~it~Gs~~al~~~~--~~-~~gd~v~v~~P~y~~~~~~~~~~g~~~-- 110 (330)
T PRK05664 46 RLPET--DDGLEAAARAYYG--------APQLLPVAGSQAAIQALP--RL-RAPGRVGVLSPCYAEHAHAWRRAGHQV-- 110 (330)
T ss_pred hCCCC--hHHHHHHHHHHhC--------CCCEEECcCHHHHHHHHH--Hc-cCCCEEEEcCCChHHHHHHHHHcCCeE--
Confidence 47653 3899999999984 479999999999999885 34 799999997 45544
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
..++. +.+++.+. +++++++||||||||.++|.+++++|+++|++++++||+||+|.++. +..++
T Consensus 111 --~~v~~-~~~~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~-----~~~s~ 175 (330)
T PRK05664 111 --RELDE-AEVEAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT-----PQHSL 175 (330)
T ss_pred --EEech-hhHhhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC-----Ccccc
Confidence 12334 55665553 57899999999999999999999999999999999999999998642 11233
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCC
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
..+ ...+++|+++||||+| |+||+|+||++ +++++++.+.+... .++.+.+.|.++..+|.+.
T Consensus 176 ~~~--------~~~~~vi~~~SfSK~~-gl~GlRiG~~v---~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~L~~~---- 238 (330)
T PRK05664 176 AAC--------AHRPGLIVLRSFGKFF-GLAGARLGFVL---AEPALLRALAELLG-PWTVSGPTRWLAQAALADT---- 238 (330)
T ss_pred ccc--------ccCCCEEEEeeccccc-cCCCcceEEEE---eCHHHHHHHHHhcC-CCCCCHHHHHHHHHHHhCh----
Confidence 333 3345799999999999 99999999999 68999999988765 5677889999999998531
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCce--eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGA--MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT 406 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 406 (463)
.+.+..++.++++++.+.+.|++. |+. +.++ +|+|+ +.+. +.++ .+.|.++
T Consensus 239 -------~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~--~~~~-------------~~~~-~~~l~~~ 291 (330)
T PRK05664 239 -------PWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWV--RTED-------------AAAL-HEFLARR 291 (330)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEE--ecCC-------------HHHH-HHHHHHC
Confidence 123456888999999999999987 653 3445 67774 4331 3344 4567788
Q ss_pred CeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 407 GISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 407 gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
||.|.+ |+. .+++||+++.+.++++++++.|+++.+
T Consensus 292 gi~v~~---f~~---~~~iRis~~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 292 GILTRL---FEQ---PASLRFGLPADEADWARLDQALLAYRK 327 (330)
T ss_pred CeEEEE---CCC---CCeEEEECCCCHHHHHHHHHHHHHHHh
Confidence 999985 542 248999999655677777777766544
No 106
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-35 Score=293.09 Aligned_cols=274 Identities=14% Similarity=0.193 Sum_probs=208.6
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW 166 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~ 166 (463)
..|++.. .+||+++|++++ ++ +++|++|+|++++|..+.. ++ ++|+ |+++ .|+++
T Consensus 49 ~~Yp~~~--~~L~~~ia~~~~------~~~~~~I~i~~Gs~e~i~~l~~-~~-~~g~-v~v~~P~y~~y~~~~~~~g~~~ 117 (339)
T PRK06959 49 RRLPEDD--DGLAACAARYYG------APDAAHVLPVAGSQAAIRALPA-LL-PRGR-VGIAPLAYSEYAPAFARHGHRV 117 (339)
T ss_pred HhCCCch--HHHHHHHHHHhC------CCCcccEEECcCHHHHHHHHHH-hc-CCCe-EEEcCCCcHHHHHHHHHCCCEE
Confidence 4588754 899999999986 54 5899999999999997755 55 7887 6664 55554
Q ss_pred cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCcc
Q 041151 167 KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFV 246 (463)
Q Consensus 167 ~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~ 246 (463)
.. ++. +. +.+.+ .++++++||||||||.++|.+++++|++.|++++.+||+||+|.++.+ . .
T Consensus 118 ~~----v~~-~~--~~~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~-~----~ 179 (339)
T PRK06959 118 VP----LDE-AA--DTLPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLP-A----A 179 (339)
T ss_pred Ee----ecc-cc--hhccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCC-c----c
Confidence 10 111 11 11222 568999999999999999999999999999999999999999998654 1 2
Q ss_pred chHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCC
Q 041151 247 SSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKP 326 (463)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~ 326 (463)
++..+ .+..++|+++||||.| |+||+|+||++ +++++++.+.+... .++++.+.|.++.++|++
T Consensus 180 s~~~~--------~~~~~vi~l~SfSK~~-gl~GlRiGy~v---~~~~li~~l~~~~~-~~~vs~~~q~a~~~~L~~--- 243 (339)
T PRK06959 180 SLAAH--------TDRPGLVVLRSVGKFF-GLAGVRAGFVL---AAPALLAALRDALG-AWTVSGPARHAVRAAFAD--- 243 (339)
T ss_pred cchhc--------cCCCCEEEEecChhhc-CCcchheEEEe---cCHHHHHHHHHhcC-CCCCcHHHHHHHHHHhCc---
Confidence 33322 2234689999999999 99999999999 69999999998876 567899999999999863
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc
Q 041151 327 GDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT 406 (463)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 406 (463)
.. + .++.++.++++++.+.+.|+++ |+.+. .+++|+|++++ . ...+ ...|.++
T Consensus 244 --~~---~---~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--~-------------~~~l-~~~l~~~ 296 (339)
T PRK06959 244 --AA---W---QAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--R-------------AAAL-HAALARR 296 (339)
T ss_pred --HH---H---HHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--C-------------HHHH-HHHHHhC
Confidence 11 2 3356788999999999999998 77665 35789996543 1 2333 4557788
Q ss_pred CeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 407 GISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 407 gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
||.|+. |+. .+++||+++.+.++++++++.|+++++.+..
T Consensus 297 GI~vr~---~~~---~~~lRisi~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 297 GIWTRY---FAP---PPSVRFGLPADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred CeEEEE---CCC---CCeEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence 999985 432 2389999976668999999999988876653
No 107
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-34 Score=282.34 Aligned_cols=275 Identities=15% Similarity=0.229 Sum_probs=199.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
|+.+.+++.+++.. ...|+. ...||++++++++ ++|++|+|+++++..++.. + .+||.|+++
T Consensus 22 p~~~~~a~~~~~~~----~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al~~~~~~-~-~~gd~vlv~ 83 (311)
T PRK08354 22 PEWLDEMFERAKEI----SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEALYLIGIL-A-LRDRKVIIP 83 (311)
T ss_pred CHHHHHHHHHHHHH----hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHHHHHHHh-h-CCCCeEEEe
Confidence 66777777766543 346764 4679999998874 4799999999999988854 4 589999997
Q ss_pred -------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEE
Q 041151 162 -------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVL 228 (463)
Q Consensus 162 -------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~v 228 (463)
.|+++. ...+|+ +.+++.++ ++++++++|||||||.+++.+++++|+++|++++++|
T Consensus 84 ~P~y~~~~~~~~~~g~~~~--~~~~d~-~~l~~~~~-------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~l 153 (311)
T PRK08354 84 RHTYGEYERVARFFAARII--KGPNDP-EKLEELVE-------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALL 153 (311)
T ss_pred CCCcHHHHHHHHHcCCEEe--ecCCCH-HHHHHhhc-------CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEE
Confidence 455541 235788 99988765 3678999999999999999999999999999999999
Q ss_pred EecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhccc
Q 041151 229 LGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALS 308 (463)
Q Consensus 229 i~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~ 308 (463)
|+||+|.++.++ +. +. . ..++|+++||||+| ++||+|+||++ + +.+.+++... .+.
T Consensus 154 i~De~y~~f~~~-~~---~~-----------~-~~~vi~~~S~SK~~-~l~GlRiG~~v---~---~~~~l~~~~~-~~~ 209 (311)
T PRK08354 154 ILDEAFIDFVKK-PE---SP-----------E-GENIIKLRTFTKSY-GLPGIRVGYVK---G---FEEAFRSVRM-PWS 209 (311)
T ss_pred EEeCcchhcccc-cc---cc-----------C-CCcEEEEeccHhhc-CCccceeeeee---e---hHHHHHHcCC-Ccc
Confidence 999999998773 21 10 1 23799999999999 99999999999 4 5666766654 455
Q ss_pred CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHh
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
.+.+.|.++..++. ..+ ++..+.++.++++++.+.+.+ ..+|+++|+++ ++ +
T Consensus 210 ~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~l~~~l-------~~~~~~~~~~~-~~--~-------- 261 (311)
T PRK08354 210 IGSTGYAFLEFLIE------DDF----EHLRKTMPLIWREKERFEKAL-------YVKSDANFFIK-DV--G-------- 261 (311)
T ss_pred CCHHHHHHHHHHHH------hHH----HHHHHHHHHHHHHHHHHHHhc-------CCCCCCcEEEE-EC--C--------
Confidence 66677777777764 111 222233444555555444433 23577777764 33 2
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
++.+++ +.|.++||.|+||+.|+. + +++||+++.. ++.+++++.|+++
T Consensus 262 -----~~~~~~-~~l~~~gv~v~~g~~f~~-~--~~iRi~~~~~-~~~~~l~~al~~~ 309 (311)
T PRK08354 262 -----DAEKFV-EFLKRNGILVRDCTSFGL-P--GYIRFSVRDR-EENEKLIRALREW 309 (311)
T ss_pred -----CHHHHH-HHHHHCCeEEEecccCCC-C--CeEEEEeCCH-HHHHHHHHHHHHh
Confidence 134444 456788999999999974 2 5999999954 3566666666553
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=5e-33 Score=282.94 Aligned_cols=360 Identities=16% Similarity=0.125 Sum_probs=258.9
Q ss_pred hhhhccchhhhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHh
Q 041151 14 NVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYL 93 (463)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~ 93 (463)
+++.++++.+..+...++++++.|.++++|+.|+|+. +.+. +.+ ...+.+++.+++
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~----------------------D~~t-ds~-t~a~~~a~~~a~ 67 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFI----------------------DLLT-DSG-TGAMSDRQWAAM 67 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCC----------------------CCCC-CCC-chhhhHHHHHHH
Confidence 5567899999999999999999999999999999942 0122 000 125677777777
Q ss_pred hhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc------------
Q 041151 94 SLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------------ 161 (463)
Q Consensus 94 ~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------ 161 (463)
.. ...+|++..|.++||++++++++ .+.|++|+|+++++..++.+++ +||| |+++
T Consensus 68 ~~---g~~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A~~~~~~all-~pGD-Vii~~p~~~~~~~~i~ 134 (460)
T PRK13238 68 MR---GDEAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAAEQILFPVLI-KKGD-VVPSNYHFDTTRAHIE 134 (460)
T ss_pred Hh---CCcccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHHHHHHHHHhC-CCCC-EEccCCcccchHHHHH
Confidence 54 34689999999999999999985 3579999999999999999998 9999 7776
Q ss_pred -cCcee---cC---------CCcc--cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc-cCCCHHHHHHHHHHhhhCC
Q 041151 162 -FHTTW---KR---------QQIG--VLIINDLQQSVAQARSKGITVRAMVIINPGNPTG-QCLSEANLREILRFCYQEN 225 (463)
Q Consensus 162 -~g~~~---~~---------~~~~--~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG-~~~s~~~l~~l~~~a~~~~ 225 (463)
.|+++ +. ++|. +|+ +.|++.+++... +++++|++++|||||| .++|.+++++|.++|++||
T Consensus 135 ~~G~~~v~v~~~~~~~~~~~~~f~g~id~-e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~g 211 (460)
T PRK13238 135 LNGATAVDLVIDEALDTGSRHPFKGNFDL-EKLEALIEEVGA--ENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYG 211 (460)
T ss_pred HcCCEEEEEeccccccccccccccCCcCH-HHHHHHHhhcCC--CceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 46666 11 2454 999 999999985210 1699999999999998 9999999999999999999
Q ss_pred eEEEeccccc--ccccCC----CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee------EEEEecCCCh
Q 041151 226 LVLLGDEVYQ--QNIYQD----ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG------GYFEMTNIPP 293 (463)
Q Consensus 226 ~~vi~Deay~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~------G~~~~~~~~~ 293 (463)
++||+|+++. ...|.. +....++..+. +.++|++|++ .++|+|+ ||+++ .++
T Consensus 212 i~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~-------------~~~~s~~D~~-~~Sg~K~g~~~~GG~i~~--~d~ 275 (460)
T PRK13238 212 IPVVIDAARFAENAYFIKQREPGYKDKSIKEIA-------------REMFSYADGL-TMSAKKDAMVNIGGLLCF--RDE 275 (460)
T ss_pred CEEEEECcchhhhhhhhhhccccccCCCHHHHh-------------hhhcccCcEE-EEecccCCCCcceeEEEc--ChH
Confidence 9999999663 233311 12334544331 2334555555 4555553 45553 236
Q ss_pred hHHHHHHhhh----h-hcccC-ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 041151 294 KTVDEIYKIA----S-IALSP-NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT 367 (463)
Q Consensus 294 ~~~~~l~~~~----~-~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~ 367 (463)
++++++++.. . .+++. +...|.+++..+.... + +.+.. ...+++++|.+.|++. |+.+..|
T Consensus 276 ~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~--~---~~~~~-------~~~~~~~~l~~~L~~~-G~~~~~p 342 (460)
T PRK13238 276 DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM--D---EDYLA-------YRIGQVEYLGEGLEEA-GVPIQTP 342 (460)
T ss_pred HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh--C---hHHHH-------HHHHHHHHHHHHHHHC-CCCeEcc
Confidence 7888887763 2 23344 4444777776654210 0 11222 1233578999999987 9999999
Q ss_pred CceeEEeeecc-CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----C------CcEEEEEecC---Cc
Q 041151 368 EGAMYSFPQIR-LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----G------IFHLRTTILP---AE 433 (463)
Q Consensus 368 ~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----~------~~~lRis~~~---~~ 433 (463)
.|++|+++++. ++.+. +..+. ++..++..++++.||.+.|++.|..+. + ...+|+++.. +.
T Consensus 343 ~Gg~~v~~d~~~~~~~~----~~~~~-~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~ 417 (460)
T PRK13238 343 AGGHAVFVDAGKFLPHI----PAEQF-PAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQ 417 (460)
T ss_pred CCceEEEEEchhcCCCC----CCCCC-chHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCH
Confidence 99999998885 21110 00001 257789999999999999999886532 2 4689999996 88
Q ss_pred CcHHHHHHHHHHHH
Q 041151 434 EDMPAIMESFKKFN 447 (463)
Q Consensus 434 e~i~~~~~~l~~~l 447 (463)
+.++.+.++|+.+.
T Consensus 418 ~~~~~~~~~l~~~~ 431 (460)
T PRK13238 418 SHMDYVAEALKAVK 431 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 109
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1e-30 Score=259.18 Aligned_cols=317 Identities=23% Similarity=0.412 Sum_probs=240.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
++..+.+..+ .........|++..|..++++.+++++...++.+..++++++++|+++++..++.++. ++|++|+++
T Consensus 13 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~ 89 (350)
T cd00609 13 PPEVLEALAA--AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVP 89 (350)
T ss_pred CHHHHHHHHH--HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEc
Confidence 4555555544 2222356788899999999999999999888876778899999999999999999997 899999998
Q ss_pred -------------cCcee---cC-CCcccCh-HHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh
Q 041151 162 -------------FHTTW---KR-QQIGVLI-INDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 -------------~g~~~---~~-~~~~~d~-~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|..+ +. .....+. .+.++....+ ++++|++++|+||||.+++.+++.+|+++|++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~ 163 (350)
T cd00609 90 DPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAELAKK 163 (350)
T ss_pred CCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHh
Confidence 34343 21 2222221 0333333333 79999999999999999999999999999999
Q ss_pred CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh-hHHHHHHhh
Q 041151 224 ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP-KTVDEIYKI 302 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~l~~~ 302 (463)
+|+++|+|++|+.+.+. +....... .. +..+.+++++|+||.+ +.+|+|+||+++ ++ ++.+.+...
T Consensus 164 ~~~~~ivD~a~~~~~~~-~~~~~~~~----~~----~~~~~~~~~~s~~K~~-~~~g~~~G~i~~---~~~~~~~~~~~~ 230 (350)
T cd00609 164 HGILIISDEAYAELVYD-GEPPPALA----LL----DAYERVIVLRSFSKTF-GLPGLRIGYLIA---PPEELLERLKKL 230 (350)
T ss_pred CCeEEEEecchhhceeC-Cccccccc----Cc----CccCcEEEEeeccccc-CCcccceEEEec---CHHHHHHHHHHH
Confidence 99999999999987763 22211011 11 3445689999999999 889999999994 66 788888877
Q ss_pred hh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCCh
Q 041151 303 AS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 303 ~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~ 381 (463)
.. ..++++...|.++..+++.. .++.+++++.++++++++.+.|++.+...+..+.+++++|+.++-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~- 299 (350)
T cd00609 231 LPYTTSGPSTLSQAAAAAALDDG----------EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG- 299 (350)
T ss_pred HHhcccCCChHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC-
Confidence 65 45788899999998888631 1456677888999999999999987444435677889999655422
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFK 444 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~ 444 (463)
.+.+.+.++|.++||.+.++..|.. .+..++|++++...+|++.++++|+
T Consensus 300 ------------~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 300 ------------DDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred ------------ChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 1355677889999999999988864 3445899999944899999999885
No 110
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.97 E-value=3.1e-29 Score=247.11 Aligned_cols=291 Identities=15% Similarity=0.144 Sum_probs=210.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
.+.+++++.+++..+ .++. .-+.+|++.+|+|++ ++++++++++|+++++..++.+++ +|||.|+++
T Consensus 35 ~~~~~~~~~~~~~~~----~g~~--~~~~~Le~~lA~~~g------~~~e~ilv~~gg~~a~~~~~~al~-~~gd~Vli~ 101 (346)
T TIGR03576 35 GFKIDEEDLELLETY----VGPA--IFEEKVQELGREHLG------GPEEKILVFNRTSSAILATILALE-PPGRKVVHY 101 (346)
T ss_pred ChhHHHHHHHHHHHh----cCCH--HHHHHHHHHHHHHcC------CCcceEEEECCHHHHHHHHHHHhC-CCCCEEEEC
Confidence 778899988888773 1222 223566666666664 678999999999999999999998 999999863
Q ss_pred ----------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 162 ----------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 162 ----------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
.|+++.. -.|+ +.++. .+ ++++|+++ ++||+|.+++.+++++|+++|++++
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~~~~---~~~l-~~l~~--~~------~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~ 168 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAEYFE---SDEL-SELKK--ID------GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKE 168 (346)
T ss_pred CCCCCCchhHHHHHHHcCCEEec---cCCH-HHHhh--Cc------CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcC
Confidence 2222200 1244 55322 11 57887775 5699999999999999999999999
Q ss_pred eEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-
Q 041151 226 LVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS- 304 (463)
Q Consensus 226 ~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 304 (463)
++||+||+|..+..+ .....+... + .. .|+++||||++ +|+|+||++ +++++++.+.+...
T Consensus 169 ~~livDEAy~~~~~~-~~~~~~~~~----~----~~---divv~s~SKal---aG~r~G~v~---~~~~li~~l~~~~~~ 230 (346)
T TIGR03576 169 AIVLVDDASGARVRR-LYGQPPALD----L----GA---DLVVTSTDKLM---DGPRGGLLA---GRKELVDKIKSVGEQ 230 (346)
T ss_pred CEEEEECCccccccc-cCCCCCHHH----c----CC---cEEEeccchhc---cccceEEEE---eCHHHHHHHHHhhcC
Confidence 999999999986531 111112221 1 21 26778999954 799999999 69999999998875
Q ss_pred hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhH
Q 041151 305 IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAI 384 (463)
Q Consensus 305 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~ 384 (463)
..++++++.|.++.++|+.. . .+.+++.++++++++.+.++++ .+.++.++ |+|++++.
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~-----------~-~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~-f~~~~~~~----- 289 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEF-----------E-LSRIRDAFKRKEEVYLRLFDKL---NVERTPTG-FVIKGVEE----- 289 (346)
T ss_pred cccCccHHHHHHHHHHHhhc-----------c-HHHHHHHHHHHHHHHHHHHHhC---CCCcCCCe-EEEEeCCC-----
Confidence 44557888998888887521 1 2345778888888888888743 44444555 68866541
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcC---cHHHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEE---DMPAIMESFKKFN 447 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e---~i~~~~~~l~~~l 447 (463)
.++.+++..+|+++||.++||+.|.. ..+|+|||++.+++ +++.+++.|++-+
T Consensus 290 --------~~~~~~~~~ll~~~gV~v~~~~~f~~--~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 290 --------EKLIEIGLDLLRNYGIITITAVGMPG--ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred --------CCHHHHHHHHHHhCCEEEeCCcccCC--CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 12456788999999999999998842 24599999997655 7999999987654
No 111
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=5.5e-29 Score=255.48 Aligned_cols=323 Identities=15% Similarity=0.153 Sum_probs=231.1
Q ss_pred cHHHHHHHHHHhhhcCC----CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSG----GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
++.+.+++.+++.+++. ....|++..++.+|+++|+++++ .++.|++++|.+ ++..++.+++ ++||.
T Consensus 125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~~-a~~sai~a~~-~~gd~ 195 (481)
T PLN02822 125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGLS-TIFSVIPAFC-KKGDI 195 (481)
T ss_pred CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHHH-HHHHHHHHhC-CCCCE
Confidence 88999999999987532 12357777778999999999995 457899998877 6788999998 99999
Q ss_pred EEEc-------------cCceecCCCccc-ChHHHHHHHHHHHHhc---CCce-eEEEEECCCCCCccCCCHHHHHHHHH
Q 041151 158 VVLL-------------FHTTWKRQQIGV-LIINDLQQSVAQARSK---GITV-RAMVIINPGNPTGQCLSEANLREILR 219 (463)
Q Consensus 158 Vlvp-------------~g~~~~~~~~~~-d~~~~l~~~l~~~~~~---~~~~-~~i~l~~p~NPtG~~~s~~~l~~l~~ 219 (463)
|+++ .|.++ ..+.. |. +.++..+++..++ .+++ ++|+++.++|+||.+.+ +++|.+
T Consensus 196 Ii~d~~~H~s~~~~~~ls~~~~--~~~~~nd~-~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~ 269 (481)
T PLN02822 196 IVADEGVHWGIQNGLYLSRSTI--VYFKHNDM-ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVR 269 (481)
T ss_pred EEEeCCccHHHHHHHHHcCCeE--EEECCCCH-HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHH
Confidence 9987 11122 00111 45 7777766643222 1234 68888899999999999 788888
Q ss_pred HhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 220 FCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 220 ~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
+|++||+++|+||+|+...++ .... .+. ..+++ ......|+++||||++ |++| ||++ +++++++.+
T Consensus 270 l~~k~~~~LIvDEa~s~gvlG-~~G~-G~~---e~~~v--~~~~~dii~~s~sKal-g~~G---G~i~---g~~~ii~~~ 335 (481)
T PLN02822 270 LKEKYRFRVLLDESNSFGVLG-KSGR-GLS---EHFGV--PIEKIDIITAAMGHAL-ATEG---GFCT---GSARVVDHQ 335 (481)
T ss_pred HHHHcCCEEEEECCccccccC-CCCC-ChH---HHcCC--CCCCCeEEEecchhhh-hhCC---eEEE---cCHHHHHHH
Confidence 999999999999999977773 2211 121 22222 1123568999999999 7778 9998 799999988
Q ss_pred Hhhhh-hcccCC--hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeee
Q 041151 300 YKIAS-IALSPN--VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQ 376 (463)
Q Consensus 300 ~~~~~-~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~ 376 (463)
+.... ..++.+ +..|.++.++|+ ..+...+++++++++++++.+.|++.+|+.+..+.+++++++.
T Consensus 336 ~~~~~~~~fsa~lPp~~~~Aa~~aL~-----------~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~ 404 (481)
T PLN02822 336 RLSSSGYVFSASLPPYLASAAITAID-----------VLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLH 404 (481)
T ss_pred HhcCCceeeccccCHHHHHHHHHHHH-----------HHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEE
Confidence 76543 344444 556666666653 2223356788999999999999998778888878889999877
Q ss_pred ccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCC--CCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 377 IRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPG--SGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg--~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
++-+.+.. ..+ ..+++..+++++||.+.|+ ..|+......++|++++ +++++|++++++|++++.+
T Consensus 405 l~~~~~~~-------~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 405 LEKSTGSA-------KEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred eCCCcccc-------cchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 74221100 001 2456777777899999976 44543222347999887 8999999999999999887
Q ss_pred HH
Q 041151 450 FM 451 (463)
Q Consensus 450 ~~ 451 (463)
..
T Consensus 478 ~~ 479 (481)
T PLN02822 478 VL 479 (481)
T ss_pred Hh
Confidence 64
No 112
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=2.9e-28 Score=246.43 Aligned_cols=335 Identities=18% Similarity=0.208 Sum_probs=227.1
Q ss_pred hcccceeccCCC-CcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHH
Q 041151 36 EGKKIIFTNVGN-PHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRK 114 (463)
Q Consensus 36 ~~~~~i~l~~G~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~ 114 (463)
+|+++|||+.|+ |++ +. ++.+.+++.+.+.........|....|.+++++
T Consensus 40 ~g~~~i~l~~~~~~~~------------------------~~-----~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~ 90 (397)
T PRK06939 40 DGKEVINFCANNYLGL------------------------AN-----HPELIAAAKAALDSHGFGMASVRFICGTQDLHK 90 (397)
T ss_pred CCCeEEEeeccCcccc------------------------CC-----CHHHHHHHHHHHHHcCCCCcccccccCCcHHHH
Confidence 577899999987 443 33 788999998888763211223334578899999
Q ss_pred HHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCceecCCCcccChHHHHHH
Q 041151 115 EVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTWKRQQIGVLIINDLQQ 181 (463)
Q Consensus 115 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~~~~~~~~d~~~~l~~ 181 (463)
++++++.+.+|. +++|++|+| ++++..++.+++ +|||.|+++ .|.++.. -...|+ +.+++
T Consensus 91 ~l~~~la~~~g~---~~~i~~tsG-~~a~~~~~~~l~-~~gd~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~d~-~~l~~ 163 (397)
T PRK06939 91 ELEEKLAKFLGT---EDAILYSSC-FDANGGLFETLL-GKEDAIISDALNHASIIDGVRLCKAKRYR-YANNDM-ADLEA 163 (397)
T ss_pred HHHHHHHHHhCC---CcEEEEcCh-HHHHHHHHHHhC-CCCCEEEEEhhhhHHHHHHHHhcCCceEE-eCCCCH-HHHHH
Confidence 999999888773 378888888 778999999997 999999997 2333311 111588 99998
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSK 261 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (463)
.+++....+.++++|++.+.+||||... ++++|+++|++++++||+||+|+...++ .... ..... .++ .+
T Consensus 164 ~i~~~~~~~~~~~~v~~~~v~~~~G~~~---~~~~l~~la~~~~~~li~De~~~~g~~~-~~~~-~~~~~-~~~----~~ 233 (397)
T PRK06939 164 QLKEAKEAGARHKLIATDGVFSMDGDIA---PLPEICDLADKYDALVMVDDSHAVGFVG-ENGR-GTVEH-FGV----MD 233 (397)
T ss_pred HHHhhhccCCCCeEEEEecCcCCCCCcC---CHHHHHHHHHHhCCEEEEECcccccCcC-CCCC-CHHHH-cCC----CC
Confidence 8875322222567777667899999864 4888899999999999999999743231 1111 11111 111 21
Q ss_pred CceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hccc-C-ChHHHHHHHHhcCCCCCCCchHHHHHHHH
Q 041151 262 EVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALS-P-NVPAQIFMGLMVNPLKPGDISYEQFVRES 338 (463)
Q Consensus 262 ~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~-~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 338 (463)
+.+|+++|+||++ + |+|+||++ +++++++.+..... ...+ + +...+.++.++++ +..+.
T Consensus 234 -~~~i~~~S~sK~~-~--g~r~G~v~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~~ 295 (397)
T PRK06939 234 -RVDIITGTLGKAL-G--GASGGYTA---GRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLE-----------LLEES 295 (397)
T ss_pred -CCcEEEEECHHHh-C--ccCceEEE---eCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHH-----------HHhcC
Confidence 2469999999998 3 66999998 58889998876543 2222 2 2333444444432 22222
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 339 KGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 339 ~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
++++++++++++++.+.|++. |+.+..+.++++.+ .++... ++.+++..++ ++||.+.++. |+.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~L~-~~gI~v~~~~-~~~ 359 (397)
T PRK06939 296 DELRDRLWENARYFREGMTAA-GFTLGPGEHPIIPV---MLGDAK----------LAQEFADRLL-EEGVYVIGFS-FPV 359 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEE---EECCHH----------HHHHHHHHHH-HCCceEeeeC-CCC
Confidence 457888999999999999987 77777677776644 222211 1445555554 5599999644 532
Q ss_pred -CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 419 -KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 419 -~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..+..++|++++ .+++++++++++|++++++.
T Consensus 360 ~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 360 VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 234468999986 78899999999999988653
No 113
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.97 E-value=2.4e-28 Score=230.75 Aligned_cols=358 Identities=18% Similarity=0.233 Sum_probs=223.9
Q ss_pred hHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCcc-
Q 041151 25 ELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAY- 103 (463)
Q Consensus 25 ~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y- 103 (463)
++....+++++.|.. +||+.|.|.. +++++...++.+........ .+.+...|
T Consensus 12 ~l~~~y~~~ka~~L~-LdmtRGKPs~---eQLdLS~~lL~~~~~~~~~~----------------------dG~D~RNY~ 65 (425)
T PF12897_consen 12 ELRKQYEELKAKGLK-LDMTRGKPSP---EQLDLSNPLLDLPGSSDYLA----------------------DGTDCRNYP 65 (425)
T ss_dssp HHHHHHHHHHHTT---EES---S--H---HHHHGGGGGGGSSTTCCBEC----------------------TTEBTTSS-
T ss_pred HHHHHHHHHHHcCCC-cccCCCCCCH---HHHhhhHHHhcCCCCccccC----------------------CCccccCCC
Confidence 345567777777765 9999999985 45555444444422221111 11267899
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHH-HHHH-HHh-----------cCCCCEEEEc---------
Q 041151 104 SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVM-QTLN-CVI-----------RGEGDGVVLL--------- 161 (463)
Q Consensus 104 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~-~~~~-~l~-----------~~~gd~Vlvp--------- 161 (463)
+...|++++|+.+|+.++ +++++|++..+++-.|. -++. +++ +.+.-+.++|
T Consensus 66 G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa 139 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA 139 (425)
T ss_dssp S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH
T ss_pred CccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH
Confidence 889999999999999998 89999999876654433 3222 221 1123457777
Q ss_pred ----cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHH-hhhCCeEEEecc
Q 041151 162 ----FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRF-CYQENLVLLGDE 232 (463)
Q Consensus 162 ----~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~-a~~~~~~vi~De 232 (463)
+|++. +....++|. +.+|+.+.+ .+.+|.||.. .-+||||.++|.|.+++|+++ +...|+.|+.|+
T Consensus 140 i~E~~Giemi~VpM~~dGPDm-D~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN 214 (425)
T PF12897_consen 140 ITEHFGIEMIPVPMTEDGPDM-DMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN 214 (425)
T ss_dssp HHHHCT-EEEEEEEETTEE-H-HHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred HHHhhCcEEEecCCCCCCCCH-HHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence 77777 788899999 999999864 2378998766 559999999999999999998 445799999999
Q ss_pred cccccccCCCCC-c--cchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hccc
Q 041151 233 VYQQNIYQDERP-F--VSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALS 308 (463)
Q Consensus 233 ay~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~ 308 (463)
+|....+.++.+ . ..+...+... +..++++.+.|.||..+ ||..++++. ++++.++.+.+..+ .+++
T Consensus 215 AY~vHhL~~~~~~~~~~nil~~~~~A----Gnpdrv~~F~STSKITf--~GaGva~~a---aS~~Nl~~~~~~~~~~tIg 285 (425)
T PF12897_consen 215 AYAVHHLYDEEPRDALLNILDACAKA----GNPDRVYVFASTSKITF--PGAGVAFFA---ASEANLAWIKKHLSVQTIG 285 (425)
T ss_dssp TTTT-BSSSSSS------HHHHHHHT----T-TTSEEEEEESTTTS---TTSS-EEEE---E-HHHHHHHHHHHHHH-S-
T ss_pred CceEeeccccccchhhhHHHHHHHHc----CCCCeEEEEeccccccc--CCcceeeee---cCHHHHHHHHHHhcCceeC
Confidence 999877632222 2 3677777777 55568999999999865 899999999 58888899888876 7899
Q ss_pred CChHHHHHHHHhcCCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHhhc-C----CCcccccCCceeEEeeeccCChh
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYE-QFVRESKGILESLRRRARMMTDGFNS-C----RNVVCNFTEGAMYSFPQIRLPPK 382 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~-~----pg~~~~~~~g~~~~~~~~~~~~~ 382 (463)
+..+.|..-..++++ .+ ....++++.++.++-+.+.+.+.|++ + ....|..|.||||+++++. .+
T Consensus 286 pdKvNQLRHvrff~d-------~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~--~G 356 (425)
T PF12897_consen 286 PDKVNQLRHVRFFKD-------AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVL--DG 356 (425)
T ss_dssp --HHHHHHHHHHHHS-------HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEES--TT
T ss_pred ccHHHHHHHHHHhcC-------hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecC--CC
Confidence 999999999999964 33 34455666666666666666655543 3 2358899999999996543 23
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCCCC--CCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSGFG--QKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~f~--~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~ 449 (463)
.+..+.+++++.||.+.| |+.|. ..+....|||+.+ .+.+|++.+++.+.-+++-
T Consensus 357 ------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 357 ------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp -------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred ------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 455677899999999999 77773 3355678999999 8999999999999887654
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3.2e-28 Score=242.71 Aligned_cols=326 Identities=15% Similarity=0.142 Sum_probs=218.6
Q ss_pred HhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCC----H
Q 041151 35 KEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGI----P 110 (463)
Q Consensus 35 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~----~ 110 (463)
.+|+++|||+.|+|. |. +. |+.+++++.+++..+......|....|. .
T Consensus 13 ~~g~~~id~~~~~~~--g~---------------------~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~ 64 (360)
T TIGR00858 13 RDGRRLLNFSSNDYL--GL---------------------AS-----HPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHE 64 (360)
T ss_pred ECCceEEecccCCcc--cC---------------------CC-----CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHH
Confidence 468889999999653 11 22 6889999998887643222223333343 3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCceecCCCcccChHH
Q 041151 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTWKRQQIGVLIIN 177 (463)
Q Consensus 111 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~~~~~~~~d~~~ 177 (463)
+++++++++++ .+++|++++|+.+ +..++.+++ ++||+|+++ .|.++. .-..+|+ +
T Consensus 65 ~l~~~la~~~~-------~~~~i~~~~G~~~-~~~~l~~~~-~~gd~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~d~-~ 133 (360)
T TIGR00858 65 ELEEELAEWKG-------TEAALLFSSGYLA-NVGVISALV-GKGDLILSDALNHASLIDGCRLSGARVR-RYRHNDV-E 133 (360)
T ss_pred HHHHHHHHHhC-------CCCEEEECchHHH-HHHHHHHhC-CCCCEEEEEccccHHHHHHHHhcCCceE-EecCCCH-H
Confidence 46667766663 3568888888554 556778887 899999986 333331 1123688 9
Q ss_pred HHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCC
Q 041151 178 DLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGL 257 (463)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 257 (463)
.|++.++... ++++++|++.+++||||...+ +++|.++|++++++||+||+|..+.++ .. ..+.... .++
T Consensus 134 ~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~-~~-~~~~~~~-~~~-- 203 (360)
T TIGR00858 134 HLERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLG-ED-GRGTLEH-FGL-- 203 (360)
T ss_pred HHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcC-CC-CCchHHh-cCC--
Confidence 9999887520 014678888899999998876 677888899999999999999876552 21 1122221 112
Q ss_pred CCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h--cccCChHHHHHHHHhcCCCCCCCchHHHH
Q 041151 258 PFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I--ALSPNVPAQIFMGLMVNPLKPGDISYEQF 334 (463)
Q Consensus 258 ~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 334 (463)
..++++|+++||||+| +++| ||++ +++++++.+.+... . ..+.+...+.++.++++ +
T Consensus 204 --~~~~~~i~i~s~sK~~-~~~g---G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-----------~ 263 (360)
T TIGR00858 204 --KPEPVDIQVGTLSKAL-GSYG---AYVA---GSQALIDYLINRARTLIFSTALPPAVAAAALAALE-----------L 263 (360)
T ss_pred --CccCCcEEEEechhhh-hccC---cEEE---cCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH-----------H
Confidence 3345789999999999 6666 9998 68888888865443 2 22334444444445542 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC
Q 041151 335 VRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~ 414 (463)
..+.+.++++++++++++.+.|+++ ++.+.++ ++.++|+.++ ... ++.++. +.|.++||.+.++.
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~--~~~----------~~~~~~-~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEAL-GFTLMPS-CTPIVPVIIG--DNA----------SALALA-EELQQQGIFVGAIR 328 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHc-CCccCCC-CCCEEEEEeC--CHH----------HHHHHH-HHHHHCCeeEeeeC
Confidence 2223456889999999999999987 6776644 5567775543 211 133444 45567899999987
Q ss_pred CCCCCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 415 GFGQKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 415 ~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
.++...+.+++||++. .+++++++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 7654334568999999 58899999998874
No 115
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=4.8e-28 Score=244.48 Aligned_cols=330 Identities=16% Similarity=0.164 Sum_probs=225.9
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCC---CC---
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSR---GI--- 109 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~---g~--- 109 (463)
+|+++|||+.|++-. .+. ++.+++++.+++..+ ..+|+++. |.
T Consensus 36 ~g~~~i~~~~~~~lg-----------------------~~~-----~~~v~~~~~~~~~~~---~~~~~~s~~~~G~~~~ 84 (393)
T TIGR01822 36 DGREVLNFCANNYLG-----------------------LSS-----HPDLIQAAKDALDEH---GFGMSSVRFICGTQDI 84 (393)
T ss_pred CCceEEEeeCCCccc-----------------------cCC-----CHHHHHHHHHHHHHh---CCCCCCcCcccCChHH
Confidence 677899999997532 133 788999999888763 13566555 75
Q ss_pred -HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------cCcee----cCCCcccChH
Q 041151 110 -PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------FHTTW----KRQQIGVLII 176 (463)
Q Consensus 110 -~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------~g~~~----~~~~~~~d~~ 176 (463)
.+|++++|++++ .+++++++|+++++..++.+++ ++||.|+++ .+.+. ...-...|+
T Consensus 85 ~~~le~~ia~~~g--------~~~~ii~~~~~~a~~~~~~~l~-~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~- 154 (393)
T TIGR01822 85 HKELEAKIAAFLG--------TEDTILYASCFDANGGLFETLL-GAEDAIISDALNHASIIDGVRLCKAKRYRYANNDM- 154 (393)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECchHHHHHHHHHHhC-CCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCH-
Confidence 788999998885 2567888888999999999998 999999997 11111 111124788
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMG 256 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 256 (463)
+.|++.+++....+.++++|++++++||||.+.+ +++|+++|++||++||+||+|+...++ . ...+.... .++
T Consensus 155 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~-~~~~~~~~-~~~- 227 (393)
T TIGR01822 155 ADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-P-TGRGSHEL-CGV- 227 (393)
T ss_pred HHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-C-CCCchHHh-cCC-
Confidence 9999998864222236788888899999999977 788888999999999999999754331 1 11122221 111
Q ss_pred CCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hccc--CChHHHHHHHHhcCCCCCCCchHHH
Q 041151 257 LPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALS--PNVPAQIFMGLMVNPLKPGDISYEQ 333 (463)
Q Consensus 257 ~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~ 333 (463)
. .+.+++++|+||++ +|+|+||++ +++++++.+.+... ...+ .+...+.++.++++
T Consensus 228 ---~-~~~di~~~s~sK~l---~g~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~----------- 286 (393)
T TIGR01822 228 ---M-GRVDIITGTLGKAL---GGASGGFTT---ARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLE----------- 286 (393)
T ss_pred ---C-CCCeEEEEEChHHh---hCCCcEEEE---eCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH-----------
Confidence 2 13568999999987 478999998 68999998876532 2222 23333344444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCC
Q 041151 334 FVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPG 413 (463)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg 413 (463)
..+..++++++++++++++.+.|++. |+.+..+.+.++.+ .++... +..+++.. |.++||.+. +
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i---~~~~~~----------~~~~l~~~-L~~~gI~v~-~ 350 (393)
T TIGR01822 287 MLEASNELRDRLWANTRYFRERMEAA-GFDIKPADHPIIPV---MLYDAV----------LAQRFARR-LLEEGIYVT-G 350 (393)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEE---EeCCHH----------HHHHHHHH-HHHCCeeEe-e
Confidence 22234567888999999999999886 87776555554332 322211 13455555 455699998 5
Q ss_pred CCCCC-CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 414 SGFGQ-KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 414 ~~f~~-~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..|.. +.+..++|++++ ++++|+++++++|+++++++
T Consensus 351 ~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 351 FFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred eCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 55542 234457999988 78999999999999887643
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=2.8e-27 Score=238.26 Aligned_cols=332 Identities=16% Similarity=0.187 Sum_probs=231.0
Q ss_pred HhcccceeccCCC-CcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHH
Q 041151 35 KEGKKIIFTNVGN-PHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVR 113 (463)
Q Consensus 35 ~~~~~~i~l~~G~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr 113 (463)
.+|++++||+.|+ ++. +. ++.+.+++.+++.........|....|..+++
T Consensus 30 ~~g~~~id~~~~~~~g~------------------------~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~ 80 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGF------------------------AD-----HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLH 80 (385)
T ss_pred ECCceEEEeeccCccCC------------------------CC-----CHHHHHHHHHHHHHcCCCCCccCcccCCcHHH
Confidence 3578899999886 342 33 78888888888775432345788888999999
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCceecCCCcccChHHHHH
Q 041151 114 KEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTWKRQQIGVLIINDLQ 180 (463)
Q Consensus 114 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~~~~~~~~d~~~~l~ 180 (463)
+++++++.+..|. ++.|++++| ++++..++.+++ ++||.|+++ .|.++ .....+|+ +.++
T Consensus 81 ~~l~~~l~~~~g~---~~~i~~~sG-~~a~~~a~~~~~-~~gd~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~d~-~~l~ 153 (385)
T TIGR01825 81 EELEEKLAKFKKT---EAALVFQSG-FNTNQGVLSALL-RKGDIVLSDELNHASIIDGLRLTKATK-KIYKHADM-DDLD 153 (385)
T ss_pred HHHHHHHHHHhCC---CcEEEECcH-HHHHHHHHHHhC-CCCCEEEEEccccHHHHHHHHhcCCce-EEeCCCCH-HHHH
Confidence 9999999887663 357888888 556778888887 899999986 12222 11235788 9999
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCC
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFS 260 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (463)
+.+++... +++++|++++++||||.+.+ +++|.++|++||+++|+||+|..+.++. ........+ ++ .
T Consensus 154 ~~l~~~~~--~~~~~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~-~~~~~~~~~--~~----~ 221 (385)
T TIGR01825 154 RVLRENPS--YGKKLIVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGE-AGRGTVHHF--GL----E 221 (385)
T ss_pred HHHHhhcc--CCCeEEEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCC-CCCccHhhc--CC----C
Confidence 88875311 25788888889999999887 6778889999999999999998766521 111111111 11 2
Q ss_pred CCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHH
Q 041151 261 KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE 337 (463)
Q Consensus 261 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 337 (463)
.+++++++||||++ |++| ||++ +++++++.+..... . ....+.+.|.++.++++. ..+
T Consensus 222 -~~~~i~~~s~sK~~-~~~g---G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-----------~~~ 282 (385)
T TIGR01825 222 -DKVDIQVGTLSKAI-GVVG---GYAA---GHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDE-----------LQR 282 (385)
T ss_pred -cCCcEEEEeccHHh-hcCC---CEEe---cCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH-----------Hhc
Confidence 34689999999998 6555 9998 68889888876542 2 122355667677666531 111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 041151 338 SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
..+..+++.++++++.+.|+++ |+.+..++++++.+. +. ... ++.+++..+++ +||.+. +..|+
T Consensus 283 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-~~--~~~----------~~~~~~~~L~~-~gi~v~-~~~~~ 346 (385)
T TIGR01825 283 SPELMERLWDNTRFFKAGLGKL-GYDTGGSETPITPVV-IG--DEK----------AAQEFSRRLFD-EGIFAQ-SIVFP 346 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEE-EC--CHH----------HHHHHHHHHHH-CCcEEc-ccCCC
Confidence 1235666778899999999887 888877777654432 22 110 13455555555 599885 44454
Q ss_pred C-CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 418 Q-KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 418 ~-~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
. +.+..++|++++ .+++++++++++|++++++
T Consensus 347 ~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 347 TVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 3 234568999886 8999999999999998854
No 117
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=2.8e-26 Score=230.42 Aligned_cols=346 Identities=14% Similarity=0.161 Sum_probs=236.3
Q ss_pred HHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCC
Q 041151 30 ASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGI 109 (463)
Q Consensus 30 ~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~ 109 (463)
.+++++.|.+++.|..|+|.. +++.+.. -..+.++..+++.. ....|++..|+
T Consensus 3 ~~~l~~~g~n~~~l~~~~v~i-------------------Dlltds~-----t~ams~~~~~a~~~---gd~~Y~~~~g~ 55 (431)
T cd00617 3 ERALKEAGYNVFLLRSEDVYI-------------------DLLTDSG-----TGAMSDYQWAAMML---GDEAYAGSKSF 55 (431)
T ss_pred HHHHHHcCCCEEeCCCCCcCC-------------------CCCCCCC-----cHHHHHHHHHHHHh---CCCccCCCCCH
Confidence 456788899999999999942 0111111 23555666666654 23569999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc------------cCcee------cC---
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------------FHTTW------KR--- 168 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------~g~~~------~~--- 168 (463)
++|+++++++++ .+.+++|+|+++++..++.+++ +|||.|+.. .|+++ ..
T Consensus 56 ~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~-~pGD~V~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~ 126 (431)
T cd00617 56 YDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILL-KPGRTVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDA 126 (431)
T ss_pred HHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhC-CCCCEEccCCcccchHHHHHhCCCEeEEEeccccccc
Confidence 999999999985 3689999999999999999998 999988421 56665 11
Q ss_pred -----CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC-ccCCCHHHHHHHHHHhhhCCeEEEeccccccc--ccC
Q 041151 169 -----QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT-GQCLSEANLREILRFCYQENLVLLGDEVYQQN--IYQ 240 (463)
Q Consensus 169 -----~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt-G~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~--~~~ 240 (463)
..+.+|+ +.|++.+++... .++++|++++||||+ |..+|.+++++|.++|++||++||+|+++... .|.
T Consensus 127 ~~~~pf~gniD~-e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i 203 (431)
T cd00617 127 QELIPFKGNIDV-AKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFI 203 (431)
T ss_pred ccccCCCCCcCH-HHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhh
Confidence 1244999 999999986200 138899999999998 99999999999999999999999999995421 120
Q ss_pred ----CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCce------eEEEEecCCChhHHHHHHhhh----h-h
Q 041151 241 ----DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR------GGYFEMTNIPPKTVDEIYKIA----S-I 305 (463)
Q Consensus 241 ----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R------~G~~~~~~~~~~~~~~l~~~~----~-~ 305 (463)
++....++..+ ++.+.|+||++ .++|+| .||+++ .+++++++++... . .
T Consensus 204 ~~r~~g~~~~si~ei-------------~~e~~s~sd~~-~mS~~K~~~~~~GG~i~~--~d~~l~~~~~~~~~~~~~~~ 267 (431)
T cd00617 204 KEREEGYRDKSIAEI-------------AREMFSYADGC-TMSAKKDGLVNIGGFLAL--RDDELYEEARQRVVLYEGFV 267 (431)
T ss_pred hcccccccCCCHHHH-------------HHHhhccCCEE-EEEeecCCCCccceEEEe--CcHHHHHHHHHhccccCCcc
Confidence 12333455443 23456777776 677776 678885 2346888887532 1 1
Q ss_pred cccCChHHH-HHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeecc--CChh
Q 041151 306 ALSPNVPAQ-IFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIR--LPPK 382 (463)
Q Consensus 306 ~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~--~~~~ 382 (463)
..+.....| .+++..|+... . .+.+.++++ ++++|.+.|.+. |+.+..|.|++++|+++. +|..
T Consensus 268 ~~gG~~~r~~~A~A~gL~e~~----------~-~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~ 334 (431)
T cd00617 268 TYGGMAGRDMEALAQGLREAV----------E-EDYLRHRVE-QVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHI 334 (431)
T ss_pred ccccccHHHHHHHHHHHHhcc----------c-HHHHHHHHH-HHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCC
Confidence 122222233 33333443110 0 112333344 558999999998 999999999999998875 1210
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCC-CCCCC--------CCcEEEEEec---CCcCcHHHHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSG-FGQKE--------GIFHLRTTIL---PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~-f~~~~--------~~~~lRis~~---~~~e~i~~~~~~l~~~l~~ 449 (463)
+..+ -++..++..++++.||.+.. |+. ++..+ .-..+||++. -+.++++...++|..+.++
T Consensus 335 -----~~~~-~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 335 -----PQEQ-FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred -----Cccc-CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 0000 14678888999999999764 441 22111 1257999999 4778999988888877765
No 118
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=1e-26 Score=235.35 Aligned_cols=308 Identities=15% Similarity=0.151 Sum_probs=216.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccC------CCCCCHHHHHHHHHHHHHhcCCCC-CCCcEEEcCCcHHHHHHHHHHHh---
Q 041151 82 PADAIARAKHYLSLTSGGLGAYS------DSRGIPGVRKEVAEFIERRDGYPS-DPELIFLTDGASKGVMQTLNCVI--- 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l~--- 151 (463)
|..+++++.+.+........... ....+.++|+.++++++ + ++++|++|+|+++++..++.++.
T Consensus 32 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~~~~~t~~i~~~~~~~~~~~ 105 (401)
T PRK10874 32 PQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLN------APDAKNIVWTRGTTESINLVAQSYARPR 105 (401)
T ss_pred CHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCHHHHHHHHHHHhhhcc
Confidence 78899999887765311111110 01224578888888886 5 68899999999999999999983
Q ss_pred cCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 152 RGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 152 ~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
.++||+|+++ .|+++ ...++.+|+ +.+++.+++ ++++|++++|+||||.+++
T Consensus 106 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~-~~l~~~i~~------~t~lv~i~~~~n~tG~~~~ 178 (401)
T PRK10874 106 LQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDV-DLLPELITP------RTRILALGQMSNVTGGCPD 178 (401)
T ss_pred CCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCH-HHHHHhcCc------CcEEEEEeCCcccccCcCC
Confidence 1689999997 45555 334567899 999999977 8999999999999999987
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
+++|+++|+++|+++++|++|+...+ +.++..+ +..+++.|++|.+ |++| +||+++
T Consensus 179 ---~~~i~~l~~~~g~~~ivD~a~~~g~~-----~~~~~~~-----------~~d~~~~s~~K~~-gp~G--~G~l~~-- 234 (401)
T PRK10874 179 ---LARAITLAHQAGMVVMVDGAQGAVHF-----PADVQAL-----------DIDFYAFSGHKLY-GPTG--IGVLYG-- 234 (401)
T ss_pred ---HHHHHHHHHHcCCEEEEECCcccccc-----cCCchhc-----------CCCEEEEeccccc-CCCc--cEEEEE--
Confidence 66778888899999999999975433 1222211 1347889999977 8888 699984
Q ss_pred CChhHHHHHHhhhh----------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 041151 291 IPPKTVDEIYKIAS----------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRR 348 (463)
Q Consensus 291 ~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (463)
++++++.+..... ...+++...+.++..+++ .+.+ ....+.+++.++.
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~-------~l~~--~g~~~~~~~~~~l 304 (401)
T PRK10874 235 -KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALE-------WLAD--IDINQAESWSRSL 304 (401)
T ss_pred -chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHH-------HHHH--hCHHHHHHHHHHH
Confidence 7888777643221 012344456666666653 1111 1123456777778
Q ss_pred HHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCc
Q 041151 349 ARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK-----EGIF 423 (463)
Q Consensus 349 ~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~-----~~~~ 423 (463)
++++.+.|+++||+.+..+..+.++++.++ .. +..+ +...|.++||.+++|..|..+ ...+
T Consensus 305 ~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~--~~-----------~~~~-~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~ 370 (401)
T PRK10874 305 ATLAEDALAKLPGFRSFRCQDSSLLAFDFA--GV-----------HHSD-LVTLLAEYGIALRAGQHCAQPLLAALGVTG 370 (401)
T ss_pred HHHHHHHHhcCCCEEEeCCCCCcEEEEEEC--Cc-----------CHHH-HHHHHHHCCcEEeccccchHHHHHHhCCCC
Confidence 889999999888988775555555553333 10 1333 446678899999999876421 1135
Q ss_pred EEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 424 HLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 424 ~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
++|+|++ ++++|++++++.|+++++.+
T Consensus 371 ~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 371 TLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 8999999 89999999999999987753
No 119
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=3.5e-26 Score=230.20 Aligned_cols=331 Identities=14% Similarity=0.122 Sum_probs=213.8
Q ss_pred hcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHH
Q 041151 36 EGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKE 115 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 115 (463)
+|+++|||+.|++. |. +. ++.+++++.+++..+......|....|...+++.
T Consensus 37 ~g~~~id~~~~~~~--g~---------------------~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~ 88 (385)
T PRK05958 37 DGRRMLNFASNDYL--GL---------------------AR-----HPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEA 88 (385)
T ss_pred CCceEEEeeCCCcc--cC---------------------CC-----CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHH
Confidence 67889999988532 11 12 6889999998887642222234444455555555
Q ss_pred HHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCceecCCCcccChHHHHHHH
Q 041151 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTWKRQQIGVLIINDLQQS 182 (463)
Q Consensus 116 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~~~~~~~~d~~~~l~~~ 182 (463)
+++.+.+.++ .++.|++++| ++++..++..++ ++||.|+++ .|.++. .....|+ +.+++.
T Consensus 89 l~~~la~~~~---~~~~i~~~~g-~~~~~~~l~~~~-~~gd~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~d~-~~l~~~ 161 (385)
T PRK05958 89 LEEELAEWFG---AERALLFSSG-YAANLAVLTALA-GKGDLIVSDKLNHASLIDGARLSRARVR-RYPHNDV-DALEAL 161 (385)
T ss_pred HHHHHHHHhC---CCcEEEECcH-HHHHHHHHHHhC-CCCCEEEEeCccCHHHHHHHHhcCCceE-EeCCCCH-HHHHHH
Confidence 5555555444 2345555554 566667778887 899999996 233331 0112478 999998
Q ss_pred HHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCC
Q 041151 183 VAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKE 262 (463)
Q Consensus 183 l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (463)
+++. .+++.++++.+++||||...+ +++|+++|++||+++|+||+|..+.++... . ..... ..+ +..
T Consensus 162 i~~~---~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g-~-~~~~~-~~~----~~~ 228 (385)
T PRK05958 162 LAKW---RAGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQG-R-GLAAE-AGL----AGE 228 (385)
T ss_pred HHhc---cCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCC-C-chHHh-hCC----CCC
Confidence 8752 012455555588999998866 778888999999999999999876552111 1 11111 112 333
Q ss_pred ceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHH
Q 041151 263 VQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESK 339 (463)
Q Consensus 263 ~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (463)
.++|++.|+||++ |++| ||++ +++++++.+.+... . ..+.+...+.++.++++ .....+
T Consensus 229 ~~~i~~~s~sK~~-~~~G---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~-----------~~~~~~ 290 (385)
T PRK05958 229 PDVILVGTLGKAL-GSSG---AAVL---GSETLIDYLINRARPFIFTTALPPAQAAAARAALR-----------ILRREP 290 (385)
T ss_pred CceEEEEechhhc-ccCC---cEEE---cCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH-----------HHhcCH
Confidence 4689999999999 7666 8887 58888888765432 1 22334444444445543 111113
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 340 GILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 340 ~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
.+++++.++++.+.+.|++. |+++..+.++++ |+.+ +... ++.++... |.++||.+.++..+..+
T Consensus 291 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~-~~~~--~~~~----------~~~~~~~~-l~~~gI~v~~~~~~~~~ 355 (385)
T PRK05958 291 ERRERLAALIARLRAGLRAL-GFQLMDSQSAIQ-PLIV--GDNE----------RALALAAA-LQEQGFWVGAIRPPTVP 355 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEE-EEEe--CCHH----------HHHHHHHH-HHHCCceEecccCCCCC
Confidence 56788999999999999987 777777766654 5333 3211 13455444 56789999986655433
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
.+.+++||+++ .+++++++++++|++++
T Consensus 356 ~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 356 AGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred CCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 34568999998 68999999999998753
No 120
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=6e-26 Score=214.27 Aligned_cols=356 Identities=15% Similarity=0.152 Sum_probs=263.2
Q ss_pred hhhhhccchhhhhHHHHHHHHHHhcc-cceeccCCCCc-CCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHH
Q 041151 13 ENVKKVQYAVRGELYLRASELQKEGK-KIIFTNVGNPH-ALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAK 90 (463)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~~G~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~ 90 (463)
+++...++++|- .....++++++ +.|||++|.-. ..|.. |. -+.+.++-+
T Consensus 3 ~~i~~~p~DpIl---gL~e~f~~D~R~~KVNLgIGvY~de~Gk~--------------------pv-----l~aV~~Ae~ 54 (396)
T COG1448 3 EKIEAAPADPIL---GLKEAFKADPRPNKVNLGIGVYKDEDGKT--------------------PV-----LRAVKKAEK 54 (396)
T ss_pred cccccCCCCchh---HHHHHHhcCCCcCeeeeeeeeeeCCCCCc--------------------ch-----hHHHHHHHH
Confidence 344455566544 44555565554 37999999533 21211 22 344444444
Q ss_pred HHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCC---CCCCcE--EEcCCcHHHHHHHHHHHhc-CCCCEEEEc---
Q 041151 91 HYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYP---SDPELI--FLTDGASKGVMQTLNCVIR-GEGDGVVLL--- 161 (463)
Q Consensus 91 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---~~~~~i--~~t~G~~~al~~~~~~l~~-~~gd~Vlvp--- 161 (463)
..+.. .....|-+..|.+.+++++++.+- |.+ +..+.| +-|.|++.|+......+.+ .|..+|+++
T Consensus 55 ~l~~~--~~~k~Yl~i~G~~~f~~~~~~llF---G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~Pt 129 (396)
T COG1448 55 RLLEQ--EKTKNYLPIEGLPEFLEAVQKLLF---GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPT 129 (396)
T ss_pred Hhhcc--ccccccCCcCCcHHHHHHHHHHhc---CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCC
Confidence 44444 266899999999999999999973 433 344433 4588999999999888752 466778887
Q ss_pred ----------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 162 ----------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 162 ----------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
.|.++ .....++|+ +.+...|+.. +...+|++. .+|||||..++.+++++|+++.++.
T Consensus 130 W~NH~~If~~aGl~v~~Y~Yyd~~~~~~df-~~mla~L~~a----~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r 204 (396)
T COG1448 130 WPNHKAIFEAAGLEVETYPYYDAETKGLDF-DGMLADLKTA----PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER 204 (396)
T ss_pred cHhHHHHHHhcCCceeeeeccccccccccH-HHHHHHHHhC----CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 77777 455667999 9999999874 244666676 7799999999999999999999999
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh---
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK--- 301 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~--- 301 (463)
+.+.+.|-+|..|.-+-+.....+..+.... ..++++.||||.| |+.|-|+|.+.+-..+.+..+++..
T Consensus 205 ~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-------~~~lva~S~SKnf-gLYgERVGa~~vva~~~~~a~~v~sqlk 276 (396)
T COG1448 205 GLIPFFDIAYQGFADGLEEDAYALRLFAEVG-------PELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLK 276 (396)
T ss_pred CCeeeeehhhhhhccchHHHHHHHHHHHHhC-------CcEEEEehhhhhh-hhhhhccceeEEEeCCHHHHHHHHHHHH
Confidence 9999999999986432222222233332221 2389999999999 9999999999776566666665532
Q ss_pred -h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C--CcccccCCceeEEeee
Q 041151 302 -I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-R--NVVCNFTEGAMYSFPQ 376 (463)
Q Consensus 302 -~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-p--g~~~~~~~g~~~~~~~ 376 (463)
. +...++++.....+++..|+++ +....|..++..++.++.++|..|.+.|++. + .+.++..+.|||.+..
T Consensus 277 ~~iR~~ySnPP~~Ga~vva~IL~~p----~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~G 352 (396)
T COG1448 277 AIIRTNYSNPPAHGAAVVATILNNP----ELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTG 352 (396)
T ss_pred HHHHhccCCCchhhHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCC
Confidence 2 2356788888999999999854 5677889999999999999999999999984 2 3888889999999843
Q ss_pred ccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHH
Q 041151 377 IRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKF 446 (463)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~ 446 (463)
+ +.+.+..+.+++||++.. .| |||++ .++..++.+.+.+.++
T Consensus 353 l-----------------s~~QV~rLree~~IY~v~-------sG----Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 353 L-----------------SPEQVDRLREEFGIYLVA-------SG----RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred C-----------------CHHHHHHHHHhccEEEec-------CC----eeeeccCChhhHHHHHHHHHhh
Confidence 3 344578889999999876 23 99999 8889999999998875
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.2e-26 Score=235.49 Aligned_cols=312 Identities=15% Similarity=0.124 Sum_probs=213.0
Q ss_pred cHHHHHHHHHHhhhcCCC----CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCC
Q 041151 82 PADAIARAKHYLSLTSGG----LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 156 (463)
++.+++++.+++..+... ...|+....+.+|++++|++++ .++.|++++| ++++..++..+.+ .+|+
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~sG-~~a~~~~i~~l~~~~~g~ 133 (410)
T PRK13392 62 HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTSG-YVSNDAALSTLGKLLPGC 133 (410)
T ss_pred CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECcH-HHHHHHHHHHHhcCCCCC
Confidence 889999999888764211 1223332235688888888875 2467888877 5677777777751 3889
Q ss_pred EEEEc-------------cCcee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 157 GVVLL-------------FHTTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 157 ~Vlvp-------------~g~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
.|+++ .|.++ ... -|. +.+++.++... .+++++|++++|+||||.+++ +++|.++|
T Consensus 134 ~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~d~-~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~ 204 (410)
T PRK13392 134 VILSDALNHASMIEGIRRSGAEKQVFRH---NDL-ADLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAICDLA 204 (410)
T ss_pred EEEEehhhhHHHHHHHHHcCCeEEEEeC---CCH-HHHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHHHHH
Confidence 88886 33333 111 245 66776665321 126899999999999999988 77777888
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
+++++++|+||+|+...++ ... ..+... .++ .+ ...|+++||||+| |++| ||++ +++++++.+++
T Consensus 205 ~~~~~~livDea~~~g~~g-~~g-~g~~~~-~~~----~~-~~div~~tlsK~~-g~~G---G~~~---~~~~~~~~l~~ 269 (410)
T PRK13392 205 DRYNALTYVDEVHAVGLYG-ARG-GGIAER-DGL----MD-RIDMIQGTLAKAF-GCLG---GYIA---ASADLIDFVRS 269 (410)
T ss_pred HHcCCEEEEECCccccCcC-CCC-Cchhhh-ccC----CC-CCcEEEEEChHhh-hccc---chhh---cCHHHHHHHHH
Confidence 8999999999999965552 111 122111 111 11 1238889999999 7777 8998 68999998887
Q ss_pred hhh-h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeecc
Q 041151 302 IAS-I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIR 378 (463)
Q Consensus 302 ~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~ 378 (463)
... . +...+++.+.++.++|+ ...+....+++++++++.+.+.|++. |+.+.+++++++.. .+.
T Consensus 270 ~~~~~~~s~~~~~~~~~a~~aaL~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i-~~~ 336 (410)
T PRK13392 270 FAPGFIFTTALPPAVAAGATAAIR-----------HLKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIVPV-MVG 336 (410)
T ss_pred hCcchhccCcCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEE-EeC
Confidence 664 2 23345567777777764 22223345677899999999999987 88887777776532 232
Q ss_pred CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 379 LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+. +..++...+++++||.+.++.....+.+..++||++. .+++|+++++++|+++.+++
T Consensus 337 ~~~------------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 337 DPT------------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CHH------------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 111 1345555666788999999765544445568999997 78899999999999887654
No 122
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=3.6e-26 Score=231.16 Aligned_cols=305 Identities=16% Similarity=0.142 Sum_probs=213.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCC-------CCCHHHHHHHHHHHHHhcCCCC-CCCcEEEcCCcHHHHHHHHHHHh--
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDS-------RGIPGVRKEVAEFIERRDGYPS-DPELIFLTDGASKGVMQTLNCVI-- 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l~-- 151 (463)
|+.+++++.+.+...... ..++.. ....++|+.++++++ . ++++|++|+|+++++..++.++.
T Consensus 29 p~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~t~g~t~~l~~~~~~~~~~ 101 (398)
T TIGR03392 29 PQAVIDATQQFYRLSSGT-VHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVWTRGTTESINLVAQSYARP 101 (398)
T ss_pred CHHHHHHHHHHHHhcCCC-CCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChHHHHHHHHHHhhhc
Confidence 888999998877542111 112221 124568899999886 4 46899999999999999999872
Q ss_pred -cCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 152 -RGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 152 -~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
.++||+|+++ .|+++ ...++.+|+ +.+++++++ ++++|++++|+||||.++
T Consensus 102 ~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~-~~l~~~i~~------~t~lv~i~~~~n~tG~~~ 174 (398)
T TIGR03392 102 RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDI-RQLPELLTP------RTRILALGQMSNVTGGCP 174 (398)
T ss_pred cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCH-HHHHHHhcc------CceEEEEECccccccccC
Confidence 1689999996 35555 233466899 999999987 899999999999999998
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +++|+++|+++|+++++|++|+...+ ...+... + ..+++.|++|.+ |++| +||+++
T Consensus 175 ~---~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~--------~---~d~~~~s~~K~~-gp~G--~G~l~~- 231 (398)
T TIGR03392 175 D---LARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQAL--------D---IDFYAFSGHKLY-GPTG--IGVLYG- 231 (398)
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhhcCCC-----CCChhhc--------C---CCEEEEeccccc-CCCc--eEEEEE-
Confidence 8 66788889999999999999975433 1222221 1 236788999977 8777 899984
Q ss_pred CCChhHHHHHHhhhh----------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHH
Q 041151 290 NIPPKTVDEIYKIAS----------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESL 345 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~ 345 (463)
++++++.+..... ...+++.....++.++++ ++.+ .++++++.
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~-----------~l~~~g~~~i~~~~ 298 (398)
T TIGR03392 232 --KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALE-----------WLTDIDIAAAEAWS 298 (398)
T ss_pred --cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHH-----------HHHHhCHHHHHHHH
Confidence 7777776642211 012333445555555542 1111 33566777
Q ss_pred HHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----C
Q 041151 346 RRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK-----E 420 (463)
Q Consensus 346 ~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~-----~ 420 (463)
.+.++.+.+.|+++||+.+..+..+.++++.++ .. +..+ +...|.++||.+++|..|... .
T Consensus 299 ~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~--~~-----------~~~~-l~~~L~~~gI~v~~g~~~~~~~~~~~g 364 (398)
T TIGR03392 299 VSLADLAEERLAQLPGFRSFRCPGSSLLAFDFA--GV-----------HHSD-LAALLAESGIALRAGQHCAQPLMAALG 364 (398)
T ss_pred HHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeC--Cc-----------CHHH-HHHHHHhCCEEEecCccchHHHHHHhC
Confidence 788889999999888888765444555553332 10 1334 445577899999999876421 1
Q ss_pred CCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 421 GIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 421 ~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..+++|+|+. ++++|++++++.|+++++++
T Consensus 365 ~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 365 VSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 1358999998 89999999999999887753
No 123
>PRK10534 L-threonine aldolase; Provisional
Probab=99.95 E-value=3.9e-26 Score=225.43 Aligned_cols=294 Identities=11% Similarity=0.080 Sum_probs=201.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
++.+++++.++.. ....|++..+..+|++++|++++ + +.+++++|+++++..++.+++ ++||+|+++
T Consensus 13 ~~~~~~a~~~~~~----~~~~Y~~~~~~~~L~~~la~~~g------~--~~~~v~~~g~~a~~~~l~~~~-~~gd~vi~~ 79 (333)
T PRK10534 13 SRAMLEAMMAAPV----GDDVYGDDPTVNALQDYAAELSG------K--EAALFLPTGTQANLVALLSHC-ERGEEYIVG 79 (333)
T ss_pred CHHHHHHHHhccC----CCcccCCCHHHHHHHHHHHHHhC------C--CeEEEeCchHHHHHHHHHHhc-CCCCeeEEe
Confidence 7888888766443 33578666678999999999985 3 344677777888888888887 899998874
Q ss_pred ---------cC-------cee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 162 ---------FH-------TTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 162 ---------~g-------~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
.+ .++ ...++.+|+ ++|++++.+......++++|++|||+ ||.+++.+++++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~ 156 (333)
T PRK10534 80 QAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPL-DKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFT 156 (333)
T ss_pred chhhhhHhcCCchHHhcCceEEeecCCCCCCCCH-HHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHH
Confidence 11 122 245688999 99999886410001147899999776 59999999999999999
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeE-EEEecCCChhHHHHHH
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGG-YFEMTNIPPKTVDEIY 300 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G-~~~~~~~~~~~~~~l~ 300 (463)
++++++|++||+|..... ... ..+...+. .. . +++ +.||||.+ |++ +| |++ +++++++.+.
T Consensus 157 ~~~~~~lvvDEA~~~~~~-~~~-~~~~~~~~-~~----~--~~~--~~s~SK~~-~~~---~G~~~~---~~~~~i~~~~ 218 (333)
T PRK10534 157 RERNLALHVDGARIFNAV-VAY-GCELKEIT-QY----C--DSF--TICLSKGL-GTP---VGSLLV---GNRDYIKRAR 218 (333)
T ss_pred HHcCCeEEeeHHHHHHHH-HHc-CCCHHHHH-hc----C--CEE--EEEeEcCC-CCc---ccceEE---cCHHHHHHHH
Confidence 999999999999873211 000 11222221 11 1 122 34899988 553 67 576 7999999998
Q ss_pred hhhh-hc--ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeec
Q 041151 301 KIAS-IA--LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQI 377 (463)
Q Consensus 301 ~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~ 377 (463)
++.. .. +..+.+.|.++...++ +.. +..++..++++++.+.|+++ |+.+.+| +++|+|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~a~~~~~l~----------~~~----~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~ 282 (333)
T PRK10534 219 RWRKMTGGGMRQAGILAAAGLYALK----------HNV----ARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRV 282 (333)
T ss_pred HHHHHhCCchhhHHHHHHHHHHHHH----------hhH----HHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEEC
Confidence 8775 22 2223345555554442 111 12223445678999999998 8888777 467888655
Q ss_pred cCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 378 RLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
+ .. +...+.++|.++||.++|+. ++|++.. .+.+++++++++|++++.
T Consensus 283 ~--~~------------~~~~~~~~l~~~gi~v~~~~---------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 283 G--EE------------QAAALGEYMRERNVLINASP---------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred C--ch------------hHHHHHHHHHHcCeeecCCc---------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 4 11 22334678889999998863 4788775 789999999999998764
No 124
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=3e-26 Score=231.63 Aligned_cols=299 Identities=13% Similarity=0.116 Sum_probs=203.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG------ 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g------ 155 (463)
++.+.+++.+++.... +....+..+++.++++++.+.. ..+++++|+|+++++..+++.+. ..+
T Consensus 57 ~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~eA~~~al~~a~-~~~~~~~~~ 126 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI-----HTSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAEANEAAIKLAR-KYGHKKGIE 126 (396)
T ss_pred CHHHHHHHHHHHhhcc-----ccccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHHHHHHHHHHHH-HHhcccCCC
Confidence 5788888888877521 1111223578889999887663 34899999999999999999775 333
Q ss_pred -CEEEEc----cCcee-----c----------CCCccc------ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc-cC
Q 041151 156 -DGVVLL----FHTTW-----K----------RQQIGV------LIINDLQQSVAQARSKGITVRAMVIINPGNPTG-QC 208 (463)
Q Consensus 156 -d~Vlvp----~g~~~-----~----------~~~~~~------d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG-~~ 208 (463)
+.|+++ +|... . ....++ |+ +.+++.+.+ ++++|+++.++||+| .+
T Consensus 127 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~i~~------~~~~vii~p~~~~~G~~~ 199 (396)
T PRK02627 127 KPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDI-EALKAAITD------KTAAVMLEPIQGEGGVNP 199 (396)
T ss_pred CCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCH-HHHHHhcCC------CeEEEEEecccCCCCCcc
Confidence 556665 33222 0 001223 88 999998865 799999998899999 68
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
++.+.+++|.++|++|++++|+||+|..+.+. +. ..++... ++ .. . +.||||.+ + +|+|+||++
T Consensus 200 ~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~-g~-~~~~~~~--~~----~p--d---i~t~sK~~-~-~G~rig~~~- 263 (396)
T PRK02627 200 ADKEYLQALRELCDENGILLILDEVQTGMGRT-GK-LFAYQHY--GI----EP--D---IMTLAKGL-G-GGVPIGAVL- 263 (396)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhcCCCcc-Cc-eeeehhc--CC----CC--C---EEEEcchh-h-CCcccEEEE-
Confidence 89999999999999999999999999986552 21 1121111 11 12 1 34799999 7 899999999
Q ss_pred cCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcc
Q 041151 289 TNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----CRNVV 363 (463)
Q Consensus 289 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~pg~~ 363 (463)
+++++++.+..... .+++.+++.|.++.++++... . ++..++++++.+.+.+.|.+ +|.+.
T Consensus 264 --~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (396)
T PRK02627 264 --AKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIE-----------E-EGLLENAAEVGEYLRAKLRELLEKYPGIK 329 (396)
T ss_pred --EcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------h-ccHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 58888888865432 567889999999988875211 1 12233344444444444433 33333
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
...+ .|.++|+.+. . +..+++..++ ++||.+.|+. .+++|++++ .++++++++++
T Consensus 330 ~~~~-~g~~~~i~~~--~------------~~~~~~~~l~-~~Gv~v~~~~-------~~~lRi~~~~~~~~~~i~~~~~ 386 (396)
T PRK02627 330 EVRG-LGLMIGIELD--R------------PAAEIVKKAL-EKGLLINVTG-------DNVLRLLPPLIISKEEIDEAVD 386 (396)
T ss_pred eecc-CcEEEEEEec--C------------cHHHHHHHHH-HCCeEEeecC-------CCEEEEECCcccCHHHHHHHHH
Confidence 3333 4667785542 1 2445555544 5699999853 237999875 78999999999
Q ss_pred HHHHHHHHH
Q 041151 442 SFKKFNDEF 450 (463)
Q Consensus 442 ~l~~~l~~~ 450 (463)
+|+++++++
T Consensus 387 ~l~~~l~~~ 395 (396)
T PRK02627 387 RLEEVLKEL 395 (396)
T ss_pred HHHHHHHhh
Confidence 999988654
No 125
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=8e-26 Score=232.58 Aligned_cols=309 Identities=15% Similarity=0.156 Sum_probs=204.8
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCce
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTT 165 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~ 165 (463)
....|+...++.+|++++|++++ .++.|++++| ..+...++.+++ ++||.|+++ .|++
T Consensus 138 sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G-~~an~~~i~al~-~~Gd~Vi~d~~~h~s~~~~~~~~Ga~ 208 (489)
T PLN02483 138 SRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMG-YATNSTIIPALI-GKGGLIISDSLNHNSIVNGARGSGAT 208 (489)
T ss_pred cccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCH-HHHHHHHHHHhC-CCCCEEEEcchhhHHHHHHHHHcCCe
Confidence 44558877889999999999996 3567888777 445667888887 999999997 5555
Q ss_pred e---cCCCcccChHHHHHHHHHHHHhcC------CceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 166 W---KRQQIGVLIINDLQQSVAQARSKG------ITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 166 ~---~~~~~~~d~~~~l~~~l~~~~~~~------~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
+ +.+ |. +.+++.+++....+ +..++++++ ...|++|.+.+ +++|+++|++|+++||+||+|+
T Consensus 209 v~~~~~~----d~-~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s 280 (489)
T PLN02483 209 IRVFQHN----TP-SHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHS 280 (489)
T ss_pred EEEEeCC----CH-HHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCc
Confidence 5 222 55 77777766421110 123666666 45799999876 7888889999999999999998
Q ss_pred ccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h--c-ccCCh
Q 041151 236 QNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I--A-LSPNV 311 (463)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~--~-~~~~~ 311 (463)
...++ ... ..+... ++. +..+.+|+++||||+| |++| ||++ +++++++.+..... . . ..++.
T Consensus 281 ~g~~G-~~G-~g~~~~---~~v--~~~~~dI~~~SfSKs~-g~~G---G~i~---~~~~li~~l~~~~~~~~~~~~~~p~ 346 (489)
T PLN02483 281 IGAVG-KTG-RGVCEL---LGV--DPADVDIMMGTFTKSF-GSCG---GYIA---GSKELIQYLKRTCPAHLYATSMSPP 346 (489)
T ss_pred cCccC-CCC-CchHHh---cCC--CcccCcEEEEecchhc-ccCc---eEEE---cCHHHHHHHHHhCccccccCCcCHH
Confidence 54442 111 111111 111 2234679999999999 7666 9998 69999999987642 1 1 22333
Q ss_pred HHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 312 PAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 312 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
..|. +.+.|+.....++ .....+++++++++++++.+.|+++ |+.+..+.+++.+|+.+..+..
T Consensus 347 ~~~~-~~aaL~~l~~~~g-----~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~~~--------- 410 (489)
T PLN02483 347 AVQQ-VISAIKVILGEDG-----TNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAK--------- 410 (489)
T ss_pred HHHH-HHHHHHHHHhCcc-----ccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCHHH---------
Confidence 3443 3333310000000 0112234678999999999999998 8877766666666543332221
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCC-CCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhccccC
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGF-GQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQYEDYRG 459 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f-~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~~~~~ 459 (463)
...++..++ ++||.+.| ..| ..+...+++|++++ ++++++++++++|+++++.+.-+|.....
T Consensus 411 ---~~~~~~~Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~~~~~~~ 476 (489)
T PLN02483 411 ---IPAFSRECL-KQNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGIKYFPAEP 476 (489)
T ss_pred ---HHHHHHHHH-HCCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCceeccCCC
Confidence 235555554 67999997 555 33334468999998 78999999999999999888777655443
No 126
>PLN02721 threonine aldolase
Probab=99.95 E-value=2.5e-25 Score=221.36 Aligned_cols=305 Identities=15% Similarity=0.153 Sum_probs=193.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC-CCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG-EGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vlv 160 (463)
++.+.+++...... .....|++. ..+||++++++++ . +.+++++++++++..++.+++ + +||+|++
T Consensus 19 ~~~~~~a~~~~~~~--~~~~~~~~~--~~~l~~~la~~~~------~--~~~~~~~~Gs~a~~~~l~~~~-~~~gd~Vl~ 85 (353)
T PLN02721 19 TDAMRAAMANAEVD--DDVLGYDPT--ALRLEEEMAKIFG------K--EAALFVPSGTMGNLISVLVHC-DVRGSEVIL 85 (353)
T ss_pred CHHHHHHHHhccCC--CcccCCCHH--HHHHHHHHHHHhC------C--ceeEEecCccHHHHHHHHHHc-cCCCCeEEE
Confidence 56666776543111 123445443 6899999999986 2 234555555666667777776 6 9999999
Q ss_pred c----------------cCcee---c-CCCcccChHHHHHHHHHHHHhcC-CceeEEEEEC-CCCCCccCCCHHHHHHHH
Q 041151 161 L----------------FHTTW---K-RQQIGVLIINDLQQSVAQARSKG-ITVRAMVIIN-PGNPTGQCLSEANLREIL 218 (463)
Q Consensus 161 p----------------~g~~~---~-~~~~~~d~~~~l~~~l~~~~~~~-~~~~~i~l~~-p~NPtG~~~s~~~l~~l~ 218 (463)
+ .|.++ + ...+.+|+ +.+++.+++....+ +++++|++++ ||||||.+++.+++++|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~ 164 (353)
T PLN02721 86 GDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDL-DAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVG 164 (353)
T ss_pred cCccceehhcccchhhhcCceeEecCCCcCCCcCH-HHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHH
Confidence 7 12233 2 34466899 99999997321111 2789999985 689999999999999999
Q ss_pred HHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH
Q 041151 219 RFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE 298 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 298 (463)
++|+++|++||+|++|....+ .....+...+.... ..++.|+||++ +. ++||+++ +++++++.
T Consensus 165 ~l~~~~g~~livD~a~~~~~~--~~~~~~~~~~~~~~---------d~~~~s~sK~l-~~---~~G~~~~--~~~~~~~~ 227 (353)
T PLN02721 165 ELAKRHGLKLHIDGARIFNAS--VALGVPVHRLVKAA---------DSVSVCLSKGL-GA---PVGSVIV--GSKSFIRK 227 (353)
T ss_pred HHHHHcCCEEEEEchhhhcch--hhhCCCHHHHhhhC---------CEEEEeccccc-CC---ceeeEEe--cCHHHHHh
Confidence 999999999999999864221 00111222221111 13455799998 42 3676443 68999888
Q ss_pred HHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc--ccCCceeEEee
Q 041151 299 IYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC--NFTEGAMYSFP 375 (463)
Q Consensus 299 l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~--~~~~g~~~~~~ 375 (463)
+..... ...+.+.+.+.++..+. .++.+.+ . .++..++++.+.+.|++++|+.+ ..+.+ .++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~---~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~ 294 (353)
T PLN02721 228 AKRLRKTLGGGMRQVGVLAAAALV--------ALQENVP---K-LEDDHKKAKLLAEGLNQIKGLRVNVAAVET-NIVYF 294 (353)
T ss_pred HHHHHHhcCCCeehhHHHHHHHHH--------HHHHHHH---H-HHHHHHHHHHHHHHHHhCCCcEEecCCccc-eEEEE
Confidence 877665 22233333333332221 1122222 2 23335667889999998878754 34444 45775
Q ss_pred eccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 376 QIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
++..... .+...+ .+.|.++||.+.|+. ..++|++++ .+++|+++++++|++++.
T Consensus 295 ~~~~~~~----------~~~~~~-~~~L~~~gi~v~~~~-------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 295 DITDGSR----------ITAEKL-CKSLEEHGVLLMPGN-------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred EccCCcc----------ccHHHH-HHHHHhCCcEEecCC-------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 5431100 023444 445668999999963 237999997 788999999999998764
No 127
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=3.9e-25 Score=224.03 Aligned_cols=304 Identities=18% Similarity=0.222 Sum_probs=211.0
Q ss_pred cHHHHHHHHHHhhhcCCCCC--ccC----CCCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHH----
Q 041151 82 PADAIARAKHYLSLTSGGLG--AYS----DSRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCV---- 150 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~--~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l---- 150 (463)
|..+++++.+.+........ .+. ......++|+.++++++ .+ +++|++|+|+++++..++.++
T Consensus 31 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~~~~g~t~~l~~~~~~~~~~~ 104 (403)
T TIGR01979 31 PQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIVFTRGTTESINLVAYSWGDSN 104 (403)
T ss_pred CHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHHhhhhc
Confidence 78889988877654211111 110 11245688899999886 45 679999999999999998875
Q ss_pred hcCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 151 IRGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 151 ~~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
. ++||.|+++ .|+++ ...++.+|+ +.+++.+.+ ++++|++++|+||||.++
T Consensus 105 ~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~l~~~i~~------~~~lv~~~~~~~~tG~~~ 176 (403)
T TIGR01979 105 L-KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDL-DDLEKLLTE------KTKLVAITHVSNVLGTVN 176 (403)
T ss_pred C-CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCH-HHHHHHhcc------CCeEEEEEcccccccccC
Confidence 4 789999996 35554 334567899 999999987 899999999999999999
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +++|.++|+++|+++++|++|+.... +.++.. .+..+++.|++|.+ |++| +|++++
T Consensus 177 ~---~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~-----------~~~d~~~~s~~K~~-gp~G--~g~l~~- 233 (403)
T TIGR01979 177 P---VEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQA-----------LDCDFYVFSGHKMY-GPTG--IGVLYG- 233 (403)
T ss_pred C---HHHHHHHHHHcCCEEEEEchhhcCcc-----ccCccc-----------cCCCEEEEeccccc-CCCC--ceEEEE-
Confidence 8 66778888899999999999975321 122211 12458899999987 8777 899985
Q ss_pred CCChhHHHHHHhhhh----------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHH
Q 041151 290 NIPPKTVDEIYKIAS----------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESL 345 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~ 345 (463)
++++++.+..... ...+++.....++..+++ +..+ .+.++++.
T Consensus 234 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~-----------~~~~~g~~~~~~~~ 300 (403)
T TIGR01979 234 --KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAID-----------YLEAIGLENIEAHE 300 (403)
T ss_pred --chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHH-----------HHHHhCHHHHHHHH
Confidence 7777666532110 011233444445554442 2222 45667888
Q ss_pred HHHHHHHHHHhhcCCCcccccCC-----ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-
Q 041151 346 RRRARMMTDGFNSCRNVVCNFTE-----GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK- 419 (463)
Q Consensus 346 ~~~~~~l~~~L~~~pg~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~- 419 (463)
.+.++.+.+.|++++|+++..|. ++++.+ .++.. +..+ +.+.|+++||.+++|..+..+
T Consensus 301 ~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~---~~~~~-----------~~~~-~~~~L~~~gI~v~~g~~~~~~~ 365 (403)
T TIGR01979 301 HELTAYALERLGEIPGLRIYGPRDAEDRGGIISF---NVEGV-----------HPHD-VGTILDEEGIAVRSGHHCAQPL 365 (403)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCccccCceEEE---EeCCc-----------CHHH-HHHHHhhCCEEEcchhhhhHHH
Confidence 88899999999988888887654 455444 22211 1233 456788999999987643210
Q ss_pred ----CCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 420 ----EGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 420 ----~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
...+++|||++ ++++|++++++.|+++++.+
T Consensus 366 ~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 366 MRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 01348999999 78899999999998877653
No 128
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=8.1e-25 Score=217.32 Aligned_cols=310 Identities=17% Similarity=0.167 Sum_probs=201.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCC----HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGI----PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
|+.+++++.+.+.+.......|....|. .++++.+++++ |. ++. ++++++++++..++.+++ ++||.
T Consensus 17 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~---~~~-iv~~sg~~a~~~~~~~~~-~~gd~ 87 (349)
T cd06454 17 HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----GK---EAA-LVFSSGYAANDGVLSTLA-GKGDL 87 (349)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----CC---CCE-EEeccHHHHHHHHHHHhc-CCCCE
Confidence 7889999999888642222233332333 45566666555 32 234 445555778888888887 89999
Q ss_pred EEEc-------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 158 VVLL-------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 158 Vlvp-------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
|+++ .|.++.. -...|. +.+++.+++.. ...+++++++++|+||||...+ +++|+++|+++
T Consensus 88 Vl~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~ 161 (349)
T cd06454 88 IISDSLNHASIIDGIRLSGAKKRI-FKHNDM-EDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKY 161 (349)
T ss_pred EEEehhhhHHHHHHHHHcCCceEE-ecCCCH-HHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHc
Confidence 9997 3444410 113577 88888887531 0125788888899999999876 67888889999
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS 304 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 304 (463)
++++|+|++|+...+..... .+..+ . . ...+.+++++|+||++ +++| ||++ +++++++.+.....
T Consensus 162 ~~~livD~a~~~g~~~~~~~--~~~~~-~-~----~~~~~~i~~~s~sK~~-~~~g---G~i~---~~~~~~~~~~~~~~ 226 (349)
T cd06454 162 GAILFVDEAHSVGVYGPHGR--GVEEF-G-G----LTDDVDIIMGTLGKAF-GAVG---GYIA---GSKELIDYLRSYAR 226 (349)
T ss_pred CCEEEEEccccccccCCCCC--Chhhh-c-c----ccccCcEEEeechhhh-cccC---CEEE---CCHHHHHHHHHhch
Confidence 99999999997543311111 11111 0 0 2234679999999998 6544 9988 58888888766543
Q ss_pred -h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCCh
Q 041151 305 -I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 305 -~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~ 381 (463)
. ....+...+.++.+.++ +..+.+..+++++++++.+.+.|.+. |+.+..+.++++.++. .+.
T Consensus 227 ~~~~~~~~~~~~~~a~~~~l~-----------~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~--~~~ 292 (349)
T cd06454 227 GFIFSTSLPPAVAAAALAALE-----------VLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLI--GDD 292 (349)
T ss_pred hhhccCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEe--CCC
Confidence 2 22445555556665553 12223456788899999999999887 7776665555554432 221
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
.. +..++ .+.|.++||.+.++.......+.+++|++++ .+++++++++++|+++
T Consensus 293 ~~----------~~~~~-~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 293 PA----------KAVAF-SDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred hH----------HHHHH-HHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 10 13444 4445566999998642222223468999998 6899999999999764
No 129
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.7e-25 Score=197.99 Aligned_cols=273 Identities=17% Similarity=0.230 Sum_probs=204.1
Q ss_pred CCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE-c------------cCcee----cCCCcccChHHHHHHHHHHHH
Q 041151 126 YPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL-L------------FHTTW----KRQQIGVLIINDLQQSVAQAR 187 (463)
Q Consensus 126 ~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv-p------------~g~~~----~~~~~~~d~~~~l~~~l~~~~ 187 (463)
.++++++|.++.|+-+.|..++++.+ .|| ++|+. | +++.+ -..+|.+|. +.+.+.+...
T Consensus 82 kpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnv-dai~evl~~d- 158 (375)
T KOG0633|consen 82 KPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNV-DAIAEVLELD- 158 (375)
T ss_pred CCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccH-HHHHHHHhcc-
Confidence 35889999999999999999999997 999 77776 3 44444 455899999 9999988752
Q ss_pred hcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEE
Q 041151 188 SKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVS 267 (463)
Q Consensus 188 ~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 267 (463)
..+|.+++++|+||||..++.+++.+|++.- .|.+|++||+|-+|.- .. |-..+. .++.|.++
T Consensus 159 ---s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p--~nglVVvDEAYidFsg--~~---S~~~lV-------~kYpNLiv 221 (375)
T KOG0633|consen 159 ---SKIKCIFLTSPGNPTGSIIKEDDILKILEMP--DNGLVVVDEAYIDFSG--VE---SRMKLV-------KKYPNLIV 221 (375)
T ss_pred ---ccceEEEEcCCCCCCcccccHHHHHHHHhCC--CCcEEEEeeeeEeecc--cc---ccchHh-------HhCCceee
Confidence 2689999999999999999999999998843 2899999999998642 11 222222 34458999
Q ss_pred EecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 041151 268 FHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRR 347 (463)
Q Consensus 268 ~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (463)
+.+|||+| |++|+|+||-.+ +..+++.+.+.+. .++.|.....++.+++.+. ..+.++..+..+-+
T Consensus 222 lqTlSKsf-GLAGiRvG~~~~---~~~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~---------n~kkme~~rdaiv~ 287 (375)
T KOG0633|consen 222 LQTLSKSF-GLAGIRVGYGAF---PLSIAEILNRAKA-PYNISVAGSVAALAALSDS---------NGKKMEDVRDAIVR 287 (375)
T ss_pred hhhhhhhc-CcceeEeecccc---cHHHHHHHHhccC-CccccchhHHHHHHhcCcc---------cchHHHHHHHHHHH
Confidence 99999999 999999999994 8889999988887 6777888777887777532 24445667777888
Q ss_pred HHHHHHHHhhcCCCccc-ccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCCCCCCCCCcEE
Q 041151 348 RARMMTDGFNSCRNVVC-NFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSGFGQKEGIFHL 425 (463)
Q Consensus 348 ~~~~l~~~L~~~pg~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~f~~~~~~~~l 425 (463)
.+..|...|.++|++.- ..+...-|+++.+.-....+ +.....+.+.+.||.|+- |+.-+ .++++
T Consensus 288 er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~----------akkly~q~at~~gVvVRfrgse~~---c~G~l 354 (375)
T KOG0633|consen 288 ERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGM----------AKKLYKQDATKMGVVVRFRGSEEG---CKGYL 354 (375)
T ss_pred HHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHH----------HHHHHHHHHHhcceEEEEcCCccc---cceeE
Confidence 88899999999887663 22223345554444222111 344455677889999975 33222 34599
Q ss_pred EEEecCCcCcHHHHHHHHHHH
Q 041151 426 RTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 426 Ris~~~~~e~i~~~~~~l~~~ 446 (463)
||++++. |+...+++.|+++
T Consensus 355 RitvGt~-EentvL~k~~K~~ 374 (375)
T KOG0633|consen 355 RITVGTP-EENTVLMKCLKQF 374 (375)
T ss_pred EEEcCCc-ccchHHHHHHHhh
Confidence 9999976 5677788877765
No 130
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=4.7e-25 Score=223.53 Aligned_cols=303 Identities=16% Similarity=0.177 Sum_probs=210.7
Q ss_pred cHHHHHHHHHHhhhcCCC--CCccCC----CCCCHHHHHHHHHHHHHhcCCCC-CCCcEEEcCCcHHHHHHHHHHH----
Q 041151 82 PADAIARAKHYLSLTSGG--LGAYSD----SRGIPGVRKEVAEFIERRDGYPS-DPELIFLTDGASKGVMQTLNCV---- 150 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~--~~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l---- 150 (463)
|..+++++.+.+.....+ ...|.. ..-..++|+++|++++ . ++++|++|+|+++++..++.++
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g~t~~l~~~~~~~~~~~ 109 (406)
T PRK09295 36 PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFIN------ARSAEELVFVRGTTEGINLVANSWGNSN 109 (406)
T ss_pred CHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcC------cCCCCeEEEeCCHHHHHHHHHHHhhhhc
Confidence 888999998877642111 111110 1124578888888885 3 5789999999999999998864
Q ss_pred hcCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 151 IRGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 151 ~~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
+ ++||+|+++ .|+++ ...++.+|+ +.|++++++ ++++|++++|+||||.++
T Consensus 110 ~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~-~~l~~~i~~------~t~lv~l~~~~n~tG~~~ 181 (406)
T PRK09295 110 V-RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQL-ETLPALFDE------RTRLLAITHVSNVLGTEN 181 (406)
T ss_pred C-CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCH-HHHHHhcCC------CcEEEEEecchhcccccC
Confidence 4 789999986 35554 234566899 999999876 799999999999999999
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +++|.++|+++++++++|++|+.... ..++... +..+++.|++|.+ |++| +||+++
T Consensus 182 ~---~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~-----------~~D~~~~s~~K~~-gp~G--~G~l~~- 238 (406)
T PRK09295 182 P---LAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQAL-----------DCDFYVFSGHKLY-GPTG--IGILYV- 238 (406)
T ss_pred C---HHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhc-----------CCCEEEeehhhcc-CCCC--cEEEEE-
Confidence 8 66778888899999999999976422 1222221 1247889999976 8777 799985
Q ss_pred CCChhHHHHHHhhhh-----------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHH-HHHHHHHHH
Q 041151 290 NIPPKTVDEIYKIAS-----------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVR-ESKGILESL 345 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~-----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~ 345 (463)
++++++.+..... ...+++.....++.++++ ...+ -.+.++++.
T Consensus 239 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~ 306 (406)
T PRK09295 239 --KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD----------YVSALGLNNIAEYE 306 (406)
T ss_pred --chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH----------HHHHhCHHHHHHHH
Confidence 7777665431100 112345555555555542 1222 145677788
Q ss_pred HHHHHHHHHHhhcCCCcccccCC--ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC----
Q 041151 346 RRRARMMTDGFNSCRNVVCNFTE--GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK---- 419 (463)
Q Consensus 346 ~~~~~~l~~~L~~~pg~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~---- 419 (463)
++.++++.+.|.+++|+.+..+. .+++.+ .++.. +..+ +...|.++||.++.|..+...
T Consensus 307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~---~~~~~-----------~~~~-~~~~L~~~gI~v~~g~~c~~~~~~~ 371 (406)
T PRK09295 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAF---NLGKH-----------HAYD-VGSFLDNYGIAVRTGHHCAMPLMAY 371 (406)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCceEEEE---EECCc-----------CHHH-HHHHHHhCCeEEeccccchHHHHHH
Confidence 88889999999988888877653 444443 22221 1333 455688999999998866431
Q ss_pred -CCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 420 -EGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 420 -~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
...+++|+|+. ++++|++.+++.|+++.+
T Consensus 372 ~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 372 YNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 11247999999 899999999999988643
No 131
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.94 E-value=3.1e-25 Score=222.94 Aligned_cols=296 Identities=14% Similarity=0.144 Sum_probs=198.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--cC----CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI--RG----EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~----~g 155 (463)
++.+.+++.+++.........|+. +.+.++++.+.+.+| .+++++++|+++++..++.++. .. ++
T Consensus 45 ~p~v~~a~~~~~~~~~~~~~~~~~-----~~~~~l~~~la~~~g----~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~ 115 (379)
T TIGR00707 45 HPKLVEALKEQLEKLVHVSNLYYT-----EPQEELAEKLVEHSG----ADRVFFCNSGAEANEAALKLARKYTGDKGKEK 115 (379)
T ss_pred CHHHHHHHHHHHhhccccccccCC-----HHHHHHHHHHHhhCC----CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCC
Confidence 688999998888763211223422 344444444444433 3599999999999999988652 02 37
Q ss_pred CEEEEc---c-Ccee-----------------cCCCccc----ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC-C
Q 041151 156 DGVVLL---F-HTTW-----------------KRQQIGV----LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC-L 209 (463)
Q Consensus 156 d~Vlvp---~-g~~~-----------------~~~~~~~----d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~-~ 209 (463)
++|+++ + |... ....+.. |+ +.+++.+.+ ++++|+++.++||+|.. +
T Consensus 116 ~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~v~~~p~~~~~g~~~~ 188 (379)
T TIGR00707 116 KKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDI-ESLKKAIDD------ETAAVIVEPIQGEGGVNPA 188 (379)
T ss_pred CeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCH-HHHHHHhhh------CeeEEEEEccccCCCCccC
Confidence 888886 2 1110 0011112 78 999999887 78999997667777764 6
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+.+++++|.++|+++++++|+||+|.++.+. +. ..++... ++ .. ++ .||||.+ + +|+|+||++
T Consensus 189 ~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~-g~-~~~~~~~--~~----~~--d~---~t~sK~~-~-~G~riG~~~-- 251 (379)
T TIGR00707 189 SAEFLKALREICKDKDALLIFDEVQTGIGRT-GK-FFAYEHY--GI----EP--DI---ITLAKGL-G-GGVPIGATL-- 251 (379)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcc-ch-hhhHHhc--CC----CC--CE---EEEcccc-c-CCcccEEEE--
Confidence 8999999999999999999999999876542 21 1111111 11 22 22 3789999 7 999999999
Q ss_pred CCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccc
Q 041151 290 NIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---RNVVCN 365 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---pg~~~~ 365 (463)
+++++++.+..... ..++.+.+.|.++.++|+ ... ..+.+++++++++.+.+.|++. .++...
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~-----------~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (379)
T TIGR00707 252 -AKEEVAEAFTPGDHGSTFGGNPLACAAALAVLE-----------VIE-KERLLENVKEKGDYFKERLEELGKNYPNKEV 318 (379)
T ss_pred -EcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH-----------HHH-hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence 58889988876542 456788999999988874 111 1235666777777777777654 122112
Q ss_pred cCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHH
Q 041151 366 FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESF 443 (463)
Q Consensus 366 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l 443 (463)
+..|.++|+.+. . +...+ .+.|.++||.+.|+. .+++||+++ .+++++++++++|
T Consensus 319 -~~~g~~~~~~~~--~------------~~~~~-~~~l~~~Gv~v~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l 375 (379)
T TIGR00707 319 -RGKGLMLGIELE--A------------PCKDI-VKKALEKGLLVNCAG-------PKVLRFLPPLIITKEEIDEAVSAL 375 (379)
T ss_pred -ccCceEEEEEec--C------------cHHHH-HHHHHHCCcEEeeCC-------CCEEEEECCCcCCHHHHHHHHHHH
Confidence 235667775443 1 12344 455778999999842 248999975 7889999999999
Q ss_pred HHH
Q 041151 444 KKF 446 (463)
Q Consensus 444 ~~~ 446 (463)
+++
T Consensus 376 ~~~ 378 (379)
T TIGR00707 376 EEA 378 (379)
T ss_pred HHh
Confidence 875
No 132
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=3e-24 Score=217.40 Aligned_cols=312 Identities=14% Similarity=0.079 Sum_probs=208.9
Q ss_pred cHHHHHHHHHHhhhcCCCCC----ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC--CC
Q 041151 82 PADAIARAKHYLSLTSGGLG----AYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG--EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~----~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~g 155 (463)
++.+++++.+++..++.... .|+...-+.+|+++++++++ .+..++++++++++..++..+. . ++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~sG~~an~~ai~~l~-~~~~~ 131 (402)
T TIGR01821 61 HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTSGYVANDATLATLA-KIIPG 131 (402)
T ss_pred CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECchHHHHHHHHHHhh-CCCCC
Confidence 88999999998887532111 12222234678888887764 1334545555888888988876 4 78
Q ss_pred CEEEEc-------------cCceecCCCc-ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 156 DGVVLL-------------FHTTWKRQQI-GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 156 d~Vlvp-------------~g~~~~~~~~-~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
+.|+.+ .|..+ ..+ ..|. +.+++.++... ..++++|++++|+||||.+.+ +++|.++|
T Consensus 132 ~~v~~~~~~h~s~~~~~~~~g~~~--~~~~~~d~-~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~ 203 (402)
T TIGR01821 132 CVIFSDELNHASMIEGIRHSGAEK--FIFRHNDV-AHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEICDLA 203 (402)
T ss_pred CEEEEcchHhHHHHHHHHHcCCeE--EEECCCCH-HHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHH
Confidence 888776 12221 112 2367 88888876421 115789999999999999988 77788888
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
+++++++|+||+|+...++ .... .+... .++ . ....|+++||||+| |++| ||++ +++++++.+..
T Consensus 204 ~~~~~~livDea~~~G~~g-~~g~-g~~~~-~~~----~-~~~div~~t~sKa~-g~~G---G~i~---~~~~~~~~l~~ 268 (402)
T TIGR01821 204 DKYGALTYLDEVHAVGLYG-PRGG-GIAER-DGL----M-HRIDIIEGTLAKAF-GVVG---GYIA---ASRKLIDAIRS 268 (402)
T ss_pred HHcCCEEEEeCcccccccC-CCCC-ccchh-ccC----C-CCCeEEEEechhhh-ccCC---ceee---cCHHHHHHHHH
Confidence 9999999999999965552 2111 11111 111 1 12358889999999 7777 8988 68899998876
Q ss_pred hhh---hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeecc
Q 041151 302 IAS---IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIR 378 (463)
Q Consensus 302 ~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~ 378 (463)
... .+.+.++..+.++.++|+ +.+....+++.+.++++++.+.|+++ |+.+..+.++++.+ .+.
T Consensus 269 ~~~~~~~t~~~~~~~~aaa~aaL~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~i-~~~ 335 (402)
T TIGR01821 269 YAPGFIFTTSLPPAIAAGATASIR-----------HLKESQDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHIVPV-IIG 335 (402)
T ss_pred hCcCceecCcCCHHHHHHHHHHHH-----------HhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEE-EeC
Confidence 553 133456667777777663 22222345566778889999999887 88877777765433 232
Q ss_pred CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 379 LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+. ...++...+++++||.+.+......+.+..++||++. .+++|++++++.|+++++++
T Consensus 336 ~~~------------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 336 DAA------------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CHH------------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 111 1344555556677999998664444445568999998 88899999999999887653
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=1.2e-24 Score=217.52 Aligned_cols=283 Identities=14% Similarity=0.165 Sum_probs=188.1
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---cC---C
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---KR---Q 169 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---~~---~ 169 (463)
+..+++.+|++++ .+.+++++|+++++..++.+++ ++||.|+++ .|+++ +. .
T Consensus 53 ~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~ 123 (370)
T TIGR02539 53 IHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHP 123 (370)
T ss_pred HHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcc
Confidence 3577888888875 3467779999999999999998 899999996 55555 22 3
Q ss_pred CcccChHHHHHHHHHHHHhc-CCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 170 QIGVLIINDLQQSVAQARSK-GITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 170 ~~~~d~~~~l~~~l~~~~~~-~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
.+.+|+ +.|++.+++.... +.++++|++++|+||||...+ +++|+++|+++|+++|+||+|+.... ..+.
T Consensus 124 ~~~~d~-~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~-----~~~~ 194 (370)
T TIGR02539 124 EYKVDP-EGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM-----PVSA 194 (370)
T ss_pred cCCcCH-HHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc-----CCCH
Confidence 577899 9999998752111 125789999999999999877 66777788899999999999986422 1122
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcc--------cCChHHHHHHHH
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IAL--------SPNVPAQIFMGL 319 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~--------~~~~~~q~~~~~ 319 (463)
... + ..++++|+||++ + +|.|+||++ +++++++.+..... ..+ ......+.++..
T Consensus 195 ~~~--------~---~di~v~s~sK~~-~-~~g~~G~l~---~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 195 KEI--------G---ADFIVGSGHKSM-A-ASGPCGVLG---MSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred HHc--------C---CCEEEeeCcccc-c-CCCCEEEEE---ECHHHHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 111 1 236779999999 6 577899999 58999998876653 111 111124444444
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc--cCCceeEEeeeccCChhhHHHHhhcCCCChHH
Q 041151 320 MVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCN--FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVF 397 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (463)
++. ...++.+..++.++. ++++.+.|+++ |+.+. .+..+.|++++++.....+. +......
T Consensus 259 al~----------~~~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~-----~~~~~~~ 321 (370)
T TIGR02539 259 SFP----------HVVERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQ-----KHKRRGY 321 (370)
T ss_pred HHH----------HHHHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhh-----hhccccH
Confidence 431 112223333333344 46899999998 77753 34456666654431100000 0001223
Q ss_pred HHHHHHHhcCeE-eeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHH
Q 041151 398 YCLRLLEATGIS-TVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 398 ~~~~ll~~~gI~-v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~ 449 (463)
.+.+.|.++||. +++ +. ..++|+++. .+++|+++++++|++++++
T Consensus 322 ~~~~~L~e~GI~~ir~----~~---~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 322 FLYEELKKRGIHGIRS----GQ---TKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHhCCCccccC----Cc---ceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 456677888997 554 21 248999974 6889999999999887654
No 134
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.94 E-value=1.4e-24 Score=214.75 Aligned_cols=301 Identities=11% Similarity=0.011 Sum_probs=202.9
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
+|+.+++++.+.... . ..|++.....++++.++++++ ++++++++|+++++..++.+++ ++||.|++
T Consensus 10 ~~~~v~~a~~~~~~~---~-~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~-~~gd~v~~ 76 (338)
T cd06502 10 PTPEMLEAMAAANVG---D-DVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHT-QPGGSVIC 76 (338)
T ss_pred CCHHHHHHHHhcccC---C-cccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhc-CCCCeEEE
Confidence 488899988776543 1 356655566788888877763 4677788888899999999997 89999998
Q ss_pred c----------------cCcee---cCCCcccChHHHHHHHHHHHHhc-CCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 161 L----------------FHTTW---KRQQIGVLIINDLQQSVAQARSK-GITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 161 p----------------~g~~~---~~~~~~~d~~~~l~~~l~~~~~~-~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
+ .|+++ +.+.+.+|+ +.+++++++..+. .+++++|++++|||| |.+++.+++++|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~-~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~ 154 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTP-EDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISAL 154 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecCCCCcCCH-HHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHH
Confidence 6 13333 334467999 9999998742100 125899999999998 667799999999999
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
|+++|+++|+||+|..+... .... ++..... . ..+++.|+||+| +++| |++++ +++++++.+.
T Consensus 155 ~~~~~~~livDea~~~~~~~-~~~~-~~~~~~~------~---~d~~~~s~sK~~-~~~~---g~~~~--~~~~~~~~~~ 217 (338)
T cd06502 155 AKENGLPLHLDGARLANAAA-ALGV-ALKTYKS------G---VDSVSFCLSKGG-GAPV---GAVVV--GNRDFIARAR 217 (338)
T ss_pred HHHcCCeEeechHHHHHHHH-hcCC-CHHHHHh------c---CCEEEEeccccC-CCcc---ceEEE--CCHHHHHHHH
Confidence 99999999999998643221 1111 3322211 1 125678999999 7777 44433 6888999887
Q ss_pred hhhh---hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeec
Q 041151 301 KIAS---IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQI 377 (463)
Q Consensus 301 ~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~ 377 (463)
.... ..+..+.+.+.++...|+.. . + .+..+++.++++++.+.|+++ |+.+.++.++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~a~~~~L~~~-----~---~----~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~v--- 281 (338)
T cd06502 218 RRRKQAGGGMRQSGFLAAAGLAALEND-----L---W----LRRLRHDHEMARRLAEALEEL-GGLESEVQTNIVLL--- 281 (338)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHhcCc-----h---H----HHHHHHHHHHHHHHHHHHHhc-CCCcccccCCeEEE---
Confidence 7653 23345667777777776521 1 1 123456777788999999988 56666667676554
Q ss_pred cCChhhHHHHhhcCCCChHHHHHHHH--HhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHH
Q 041151 378 RLPPKAIEAAKRAGKVPDVFYCLRLL--EATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKK 445 (463)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~ 445 (463)
..+... ..-..+..++. .++||.+.+... +++|+++. .++++++++++++++
T Consensus 282 ~~~~~~---------~~~~~l~~~l~~~~~~gi~~~~~~~-------~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 282 DPVEAN---------AVFVELSKEAIERRGEGVLFYAWGE-------GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ecCCcc---------HHHHHHHHHHHHhhhCCEEEEecCC-------CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 222110 00112222211 257999877421 47999999 688999999998864
No 135
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=4.7e-24 Score=216.07 Aligned_cols=312 Identities=12% Similarity=0.026 Sum_probs=211.1
Q ss_pred cHHHHHHHHHHhh-hcC---CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLS-LTS---GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~-~~~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
++.+.+++.+.+. .+. .....|....+...+++.+++++.+.+|.+ ..+|++++ +++++..++.+++ +|||+
T Consensus 32 ~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a~~~~l~~l~-~~Gd~ 107 (402)
T cd00378 32 SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQANLAVYFALL-EPGDT 107 (402)
T ss_pred CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHHHHHHHHHhc-CCCCE
Confidence 7889988876542 221 123446666677788887777776666653 34566665 5799999999998 99999
Q ss_pred EEEc---c---------------Ccee-----cCC--CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 158 VVLL---F---------------HTTW-----KRQ--QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 158 Vlvp---~---------------g~~~-----~~~--~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
|+++ + |.++ ..+ ++.+|+ +.+++.+.+. ++++|++++|+||+ ..
T Consensus 108 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~-~~l~~~i~~~-----~~~~v~~~~~~~~~--~~--- 176 (402)
T cd00378 108 IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDY-DALEKMALEF-----KPKLIVAGASAYPR--PI--- 176 (402)
T ss_pred EEEecCccCccccccccccccccceeEEEecCCcCcccCCcCH-HHHHHHHHhC-----CCCEEEecCcccCC--Cc---
Confidence 9996 1 2222 222 688999 9999998643 78999999998874 22
Q ss_pred HHHHHHHHhhhCCeEEEecccc-cccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 213 NLREILRFCYQENLVLLGDEVY-QQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
++++|+++|+++|++||+|++| ..+.+ .+.....+ . . ..++++|+||+| +|+|+||++.
T Consensus 177 ~~~~I~~l~~~~~~~li~D~a~~~g~~~-~g~~~~~~-----------~-~-~dv~~~s~sK~l---~G~~gg~i~~--- 236 (402)
T cd00378 177 DFKRFREIADEVGAYLLVDMAHVAGLVA-GGVFPNPL-----------P-G-ADVVTTTTHKTL---RGPRGGLILT--- 236 (402)
T ss_pred CHHHHHHHHHhcCCEEEEEccchhhhhh-cccCCCcc-----------c-C-CcEEEeccccCC---CCCCceEEEe---
Confidence 3888999999999999999996 33333 22111111 1 1 126899999987 6899999995
Q ss_pred Ch-hHHHHHHhhhh-hcccCChHHHH-HHHHhcCCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccc-c
Q 041151 292 PP-KTVDEIYKIAS-IALSPNVPAQI-FMGLMVNPLKPGDISYEQFVR-ESKGILESLRRRARMMTDGFNSCRNVVCN-F 366 (463)
Q Consensus 292 ~~-~~~~~l~~~~~-~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~pg~~~~-~ 366 (463)
++ ++++.+.+... ...+.+...+. ++..++. .... +.++.+++++++++++.+.|++. |+.+. .
T Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 305 (402)
T cd00378 237 RKGELAKKINSAVFPGLQGGPHLHVIAAKAVALK----------EALEPEFKAYAKQVVENAKALAEALKER-GFKVVSG 305 (402)
T ss_pred ccHHHHHHHHHHhCccccCCchHHHHHHHHHHHH----------HHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeec
Confidence 54 88888876653 22333322232 2222221 1122 34456778999999999999988 88775 4
Q ss_pred CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC---CCCcEEEEEec-C-----CcCcHH
Q 041151 367 TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK---EGIFHLRTTIL-P-----AEEDMP 437 (463)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~---~~~~~lRis~~-~-----~~e~i~ 437 (463)
+.+++++|++++... .+...+.++|+++||.+.+....+.. ....++|+++. . +++|++
T Consensus 306 ~~~~~~v~v~~~~~~------------~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~ 373 (402)
T cd00378 306 GTDNHLVLVDLRPKG------------ITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEME 373 (402)
T ss_pred CCCCeEEEEeCCccC------------CCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHH
Confidence 678899997765211 12334566788999999874322221 13357999997 2 589999
Q ss_pred HHHHHHHHHHHHHH
Q 041151 438 AIMESFKKFNDEFM 451 (463)
Q Consensus 438 ~~~~~l~~~l~~~~ 451 (463)
.+++.|++++++-.
T Consensus 374 ~~~~~l~~~~~~~~ 387 (402)
T cd00378 374 EIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHHHhccc
Confidence 99999998776543
No 136
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=9.2e-24 Score=214.10 Aligned_cols=308 Identities=14% Similarity=0.137 Sum_probs=204.0
Q ss_pred cHHHHHHHHHHhhhcCCCC---Ccc-CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSGGL---GAY-SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~---~~Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
.+.+++++.+++..++... ..| .......+|++.+|++++ .+.+++++|+++++..+++++. .+||.
T Consensus 70 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~sG~~An~~~l~~l~-~~g~~ 140 (407)
T PRK07179 70 HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLCQSGWAANVGLLQTIA-DPNTP 140 (407)
T ss_pred CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhC-CCCCE
Confidence 7889999998887642211 112 111234678888888864 3567889999999999999998 89999
Q ss_pred EEEc-------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 158 VVLL-------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 158 Vlvp-------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
|+++ .|.++. .....|+ +.|++.+++. ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 141 v~~~~~~h~s~~~~~~~~g~~~~-~~~~~d~-~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~ 210 (407)
T PRK07179 141 VYIDFFAHMSLWEGVRAAGAQAH-PFRHNDV-DHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEF 210 (407)
T ss_pred EEEECCcCHHHHHHHHHCCCeEE-EecCCCH-HHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHc
Confidence 9886 222221 1112488 9999999762 4788888899999999999 66788888999
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS 304 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 304 (463)
|+++|+||+|....++ ......+. .++. . ....+++.|+||++ | .|+||++ +++++++.+.....
T Consensus 211 ~~~livDea~~~g~~g-~~g~g~~~----~~~~--~-~~vdi~~~S~sK~~-g---~~~G~l~---~~~~~~~~~~~~~~ 275 (407)
T PRK07179 211 GCVLVVDESHSLGTHG-PQGAGLVA----ELGL--T-SRVHFITASLAKAF-A---GRAGIIT---CPRELAEYVPFVSY 275 (407)
T ss_pred CCEEEEECcccccCcC-CCCCchHH----hcCC--C-CCCCEEEeechHhh-h---ccCeEEE---eCHHHHHHHHHhCc
Confidence 9999999999865442 11111121 1211 1 11248889999988 4 3799998 58888887765543
Q ss_pred -h-cccCChHHHHH-HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCCh
Q 041151 305 -I-ALSPNVPAQIF-MGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 305 -~-~~~~~~~~q~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~ 381 (463)
. ..++....+.+ +.++++ ...+.+..+++++++++++.+.|+++ |+.+. +.+ .++++.+ +.
T Consensus 276 ~~~~~~t~~~~~~aa~~aal~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~-~i~~l~~--~~ 339 (407)
T PRK07179 276 PAIFSSTLLPHEIAGLEATLE-----------VIESADDRRARLHANARFLREGLSEL-GYNIR-SES-QIIALET--GS 339 (407)
T ss_pred CeeeCCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCC-CEEEEEe--CC
Confidence 1 12222233333 223332 23333456788999999999999988 87766 344 3445333 22
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
. .+...+...|.++||.+......+.+.+.+++||+++ .+++|+++++++|++++++.
T Consensus 340 ~-----------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 340 E-----------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred H-----------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 1 0234455667889998542111111123468999999 79999999999999887764
No 137
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=1.7e-24 Score=218.14 Aligned_cols=303 Identities=15% Similarity=0.120 Sum_probs=196.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---cCCCC--
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---RGEGD-- 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~~gd-- 156 (463)
++.+.+++.+++.... .++.. ...+...++++.+.+. ...++|++++|+++|+..++++.. .++||
T Consensus 49 ~p~v~~a~~~~~~~~~----~~~~~-~~~~~~~~la~~l~~~----~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~ 119 (389)
T PRK01278 49 HPHLVEALKEQAEKLW----HVSNL-YRIPEQERLAERLVEN----SFADKVFFTNSGAEAVECAIKTARRYHYGKGHPE 119 (389)
T ss_pred CHHHHHHHHHHHHhcC----ccccc-cCChHHHHHHHHHHhh----CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6789999988887521 11111 1234445566665443 234799999999999999988762 14666
Q ss_pred --EEEEc----cCcee----------c-------CCCcc----cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc-cC
Q 041151 157 --GVVLL----FHTTW----------K-------RQQIG----VLIINDLQQSVAQARSKGITVRAMVIINPGNPTG-QC 208 (463)
Q Consensus 157 --~Vlvp----~g~~~----------~-------~~~~~----~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG-~~ 208 (463)
+|++. +|... . ..++. .|+ +.+++.+++ ++++|+++.++||+| .+
T Consensus 120 r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 120 RYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDI-EALKAAITP------NTAAILIEPIQGEGGIRP 192 (389)
T ss_pred CCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCH-HHHHHhhCC------CeEEEEEecccCCCCCcC
Confidence 77775 22111 0 11111 578 999998876 799999997788988 78
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
++.+.+++|.++|++||+++|+||+|..+.+. +... .. .. .++ .. -+.||||.+ + +|+|+||++
T Consensus 193 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~-g~~~-~~-~~-~~~----~p-----di~t~sK~l-~-~G~~ig~~~- 256 (389)
T PRK01278 193 APDEFLKGLRQLCDENGLLLIFDEVQCGMGRT-GKLF-AH-EW-AGV----TP-----DIMAVAKGI-G-GGFPLGACL- 256 (389)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-Ccce-ee-cc-cCC----CC-----CEEEEehhc-c-CCcceEEEE-
Confidence 99999999999999999999999999976542 2211 11 10 011 11 135899999 6 899999999
Q ss_pred cCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ccccc
Q 041151 289 TNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRN-VVCNF 366 (463)
Q Consensus 289 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg-~~~~~ 366 (463)
+++++++.+..... .+++.+++.|.++.+.|+... -....++.+++.+.++++.+.+.+ ..|+ +....
T Consensus 257 --~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-----~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~~v~ 326 (389)
T PRK01278 257 --ATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-----APGFLDNVQRMGLYLKQKLEGLVD---RFPDVIEEVR 326 (389)
T ss_pred --EcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHh---hCCCceeeEe
Confidence 58888888765543 567788999999987764110 001122233333344443333322 2332 22233
Q ss_pred CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 367 TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
+ .|+++++.+. . ++.+++..++ ++||.+.|+. .+++||+++ .+++++++++++|+
T Consensus 327 g-~G~~~~i~~~--~------------~~~~~~~~l~-~~GV~~~p~~-------~~~lR~~p~~~~~~~~i~~~l~~l~ 383 (389)
T PRK01278 327 G-KGLLLGLKCV--V------------PNRDLVQALR-DEGLLTVGAG-------DNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred c-ccEEEEEEEe--c------------CHHHHHHHHH-HCCeEEeecC-------CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 3 4566664442 1 2455555555 5599999863 247999976 78899999999999
Q ss_pred HHHHH
Q 041151 445 KFNDE 449 (463)
Q Consensus 445 ~~l~~ 449 (463)
+++++
T Consensus 384 ~~l~~ 388 (389)
T PRK01278 384 RAAES 388 (389)
T ss_pred HHHHh
Confidence 98865
No 138
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.94 E-value=1.6e-23 Score=212.46 Aligned_cols=315 Identities=16% Similarity=0.101 Sum_probs=207.4
Q ss_pred cHHHHHHHHHHhhhcCCC----CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCC
Q 041151 82 PADAIARAKHYLSLTSGG----LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 156 (463)
++.+++++.+++..+... ...|++..-+.+|++++|++++ .++.+++++| +++...++..+.. .+++
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~~~~~~sG-~~an~~ai~~l~~~~~~~ 133 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEAALVFTSG-YVSNDATLSTLAKLIPDC 133 (407)
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCcEEEECcH-HHHHHHHHHHHhCCCCCC
Confidence 788999998888764211 1123333345678888888763 2345655665 5677777887751 2777
Q ss_pred EEEEc--------cCcee---cCCCc-ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 157 GVVLL--------FHTTW---KRQQI-GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 157 ~Vlvp--------~g~~~---~~~~~-~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
.|+.+ .|.+. +...+ ..|. +.|++.++... .+++++|++++|+||+|.+.+ +++|.++|+++
T Consensus 134 ~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~-~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~ 207 (407)
T PRK09064 134 VIFSDELNHASMIEGIRRSRCEKHIFRHNDV-AHLEELLAAAD--PDRPKLIAFESVYSMDGDIAP---IAEICDLADKY 207 (407)
T ss_pred EEEEeCcchHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHhcc--CCCCeEEEEeCCCCCCccccC---HHHHHHHHHHc
Confidence 77665 11111 11111 1367 88888886321 026899999999999999987 77777788899
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS 304 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 304 (463)
++++|+||+|+...|+. .. ..+... .++ . ....|+++||||+| |++| ||++ +++++++.+.+...
T Consensus 208 ~~~livDEa~~~G~~g~-~g-~g~~~~-~~~----~-~~~div~~t~sKa~-g~~G---G~~~---~~~~~~~~l~~~~~ 272 (407)
T PRK09064 208 NALTYLDEVHAVGMYGP-RG-GGIAER-DGL----M-DRIDIIEGTLAKAF-GVMG---GYIA---GSAALVDAVRSYAP 272 (407)
T ss_pred CCEEEEECCCcccccCC-CC-CChHHh-cCC----C-CCCeEEEEecchhh-hccC---ceEe---cCHHHHHHHHHhCc
Confidence 99999999998554522 11 122221 111 1 12468899999999 7777 9988 68889988876543
Q ss_pred -h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCCh
Q 041151 305 -I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPP 381 (463)
Q Consensus 305 -~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~ 381 (463)
. +.+.++..+.++.+.++ +.++....+++++++++++.+.|++. |+.+..+.+++ +++.+..+.
T Consensus 273 ~~~~t~~~~~~~~~aa~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-v~i~~~~~~ 339 (407)
T PRK09064 273 GFIFTTSLPPAIAAAALASIR-----------HLKESNEERERHQERAAKLKAALDAA-GIPVMPNESHI-VPVMVGDPE 339 (407)
T ss_pred cccccCcCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEeCCHH
Confidence 2 23445555666655542 23322345677889999999999987 88877666654 343332111
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+..++...+++++||.+.+...+..+.+..++||+++ ++++|++++++.|+++++++
T Consensus 340 ------------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 340 ------------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred ------------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1345555566677999998665444345568999998 78899999999999988764
No 139
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=2e-24 Score=220.05 Aligned_cols=306 Identities=15% Similarity=0.160 Sum_probs=208.3
Q ss_pred cHHHHHHHHHHhhhcCCCC---CccCC---CCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHH----
Q 041151 82 PADAIARAKHYLSLTSGGL---GAYSD---SRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCV---- 150 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~---~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l---- 150 (463)
|..+++++.+.+....... ..|.. ...+.++|+.++++++ .+ +++|++|+|+++++..++..+
T Consensus 45 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g~t~al~~i~~~~~~~~ 118 (424)
T PLN02855 45 PAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIVFTRNATEAINLVAYTWGLAN 118 (424)
T ss_pred CHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEEeCCHHHHHHHHHHHhhhhc
Confidence 8889999888776532111 11111 1124588899999886 43 579999999999999998863
Q ss_pred hcCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 151 IRGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 151 ~~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
+ ++||+|+++ .|+++ ....+.+|+ +.+++.+++ ++++|++++|+||||.++
T Consensus 119 ~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~-~~l~~~i~~------~t~lv~i~~~~n~tG~~~ 190 (424)
T PLN02855 119 L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDV-EQLKELLSE------KTKLVATHHVSNVLGSIL 190 (424)
T ss_pred C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCH-HHHHHHhcc------CceEEEEeCccccccccC
Confidence 4 789999986 35555 233456899 999999986 899999999999999999
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +++|+++|+++|++|++|++|+.. .....+.. .+..+++.|++|.+ |++| +||+++
T Consensus 191 ~---~~~I~~l~~~~g~~vivD~a~~~g-----~~~~~~~~-----------~~~d~~~~s~~K~~-gp~G--~G~l~~- 247 (424)
T PLN02855 191 P---VEDIVHWAHAVGAKVLVDACQSVP-----HMPVDVQT-----------LGADFLVASSHKMC-GPTG--IGFLWG- 247 (424)
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhhcC-----CcCCCchh-----------cCCCEEEeeccccc-CCCc--cEEEEE-
Confidence 8 567788888999999999999642 11122222 11247899999966 7777 899995
Q ss_pred CCChhHHHHHHhhhh---------------------hccc-CChHHHHHHHHhcCCCCCCCchHHHHHH-HHHHHHHHHH
Q 041151 290 NIPPKTVDEIYKIAS---------------------IALS-PNVPAQIFMGLMVNPLKPGDISYEQFVR-ESKGILESLR 346 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~---------------------~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 346 (463)
++++++.+..... ...+ ++.....++..+++ ...+ ..++++++..
T Consensus 248 --~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 248 --KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID----------YLSEIGMDRIHEYEV 315 (424)
T ss_pred --chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH----------HHHHhCHHHHHHHHH
Confidence 7777766532210 0111 22223333344432 1111 2556777888
Q ss_pred HHHHHHHHHhhcCCCcccccCC-------ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc-CeEeeCCCCCCC
Q 041151 347 RRARMMTDGFNSCRNVVCNFTE-------GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT-GISTVPGSGFGQ 418 (463)
Q Consensus 347 ~~~~~l~~~L~~~pg~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gI~v~pg~~f~~ 418 (463)
+.++.+.+.|++++|+++..+. ++++.+ .+|.. +..+ +...|.++ ||.++.|..+..
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~---~~~~~-----------~~~~-v~~~L~~~~gI~v~~g~~c~~ 380 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAF---NVEGI-----------HPTD-LSTFLDQQHGVAIRSGHHCAQ 380 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEE---EECCc-----------CHHH-HHHHhcccCCEEEechhhhhH
Confidence 8889999999888888877442 233332 33321 1334 44455555 999999886532
Q ss_pred C-----CCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 419 K-----EGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 419 ~-----~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
+ .-..++|+|+. ++++|++++++.|+++++++.
T Consensus 381 ~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 381 PLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred HHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 11247999999 899999999999999988754
No 140
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=8.6e-25 Score=221.05 Aligned_cols=304 Identities=13% Similarity=0.062 Sum_probs=205.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++.........|+...+ .++++++.+.++.. ++++|++++|+++++..+++.+. .+| +.|+.
T Consensus 61 ~p~v~~ai~~~~~~~~~~~~~~~~~~~-----~~la~~l~~~~~~~-~~~~v~~~~sgsea~~~al~~~~-~~g~~~ii~ 133 (398)
T PRK03244 61 HPAVVEAVTRQLATLGHVSNLFATEPQ-----IALAERLVELLGAP-EGGRVFFCNSGAEANEAAFKLAR-LTGRTKIVA 133 (398)
T ss_pred CHHHHHHHHHHHHhccCccCccCCHHH-----HHHHHHHHHhCCCC-CCCEEEEeCchHHHHHHHHHHHH-HHCCCeEEE
Confidence 688999998888764222234654322 34555554444422 45799999999999999999876 566 33433
Q ss_pred c----cCcee----------cC-------CC-c---ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHH-H
Q 041151 161 L----FHTTW----------KR-------QQ-I---GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN-L 214 (463)
Q Consensus 161 p----~g~~~----------~~-------~~-~---~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~-l 214 (463)
. +|... .. .. . -.|+ +.+++.+.+ ++++|+++.++||||.+++.++ +
T Consensus 134 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l 206 (398)
T PRK03244 134 AEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDV-DALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYL 206 (398)
T ss_pred ECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCH-HHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHH
Confidence 2 22211 00 00 0 0277 899988864 7999999999999999997665 9
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|.++|++||+++|+||+|..+... +.. ..+ .. .++ ..+ +.||||++ + +|+|+||++ ++++
T Consensus 207 ~~l~~l~~~~~~llI~DEv~~g~gr~-g~~-~~~-~~-~~~----~pD-----i~t~sK~l-~-~G~~ig~~~---~~~~ 268 (398)
T PRK03244 207 AAAREITDRHGALLVLDEVQTGIGRT-GAW-FAH-QH-DGV----TPD-----VVTLAKGL-G-GGLPIGACL---AFGP 268 (398)
T ss_pred HHHHHHHHHcCCEEEEeccccCCccc-chH-Hhh-hh-hCC----CCC-----EEEEchhh-h-CCcccEEEE---EcHH
Confidence 99999999999999999999875431 111 111 11 111 221 24889999 6 899999999 4888
Q ss_pred HHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc--ccCCcee
Q 041151 295 TVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC--NFTEGAM 371 (463)
Q Consensus 295 ~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~--~~~~g~~ 371 (463)
+++.+..... .+++.+++.|.++.++|+ ... ..+..++++++.+.+.+.|+++ ++.+ .....|.
T Consensus 269 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~-----------~~~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~ 335 (398)
T PRK03244 269 AADLLTPGLHGSTFGGNPVACAAALAVLD-----------TIA-SEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGL 335 (398)
T ss_pred HHhhccCCCCcCCCCCCHHHHHHHHHHHH-----------HHH-hccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccE
Confidence 8888865432 567889999999988864 111 1235566777788888888875 3321 1123567
Q ss_pred EEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 372 YSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
++|+.+. .. .... +...+.++||.+.+.. .+.+|++++ .+++|+++++++|++++.+
T Consensus 336 ~~~i~~~--~~-----------~~~~-~~~~l~~~Gv~~~~~~-------~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 336 LLGIVLT--AP-----------VAKA-VEAAAREAGFLVNAVA-------PDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred EEEEEEe--cc-----------HHHH-HHHHHHHCCeEEeecC-------CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 7775543 11 1233 4455677899998831 237999987 7889999999999999876
Q ss_pred HH
Q 041151 450 FM 451 (463)
Q Consensus 450 ~~ 451 (463)
.+
T Consensus 395 ~~ 396 (398)
T PRK03244 395 AA 396 (398)
T ss_pred cc
Confidence 54
No 141
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.6e-24 Score=217.98 Aligned_cols=309 Identities=12% Similarity=0.112 Sum_probs=210.1
Q ss_pred cHHHHHHHHHHhhhcCCCCC-ccCC----CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---C
Q 041151 82 PADAIARAKHYLSLTSGGLG-AYSD----SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR---G 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~-~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~ 153 (463)
|+.+++++.+.+.....+.. .|.. ..-..++|+.+|++++ .++++|++|+|+++++..++.+++. +
T Consensus 13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~ 86 (381)
T PRK02948 13 SKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQGIYFTSGGTESNYLAIQSLLNALPQ 86 (381)
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcHHHHHHHHHHHHHHhccC
Confidence 88899999887765311111 1110 1113467777777775 5788999999999999999888851 4
Q ss_pred CCCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHH
Q 041151 154 EGDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN 213 (463)
Q Consensus 154 ~gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~ 213 (463)
+|+.|+++ .|.++ ....+.+|+ +.|++.+++ ++++|++++|+||||.+++
T Consensus 87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~-~~l~~~l~~------~~~lv~~~~~~n~tG~~~~--- 156 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRL-VDLERAITP------DTVLASIQHANSEIGTIQP--- 156 (381)
T ss_pred CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCH-HHHHHhcCC------CCEEEEEECCcCCcEeehh---
Confidence 68988885 35555 234567899 999999876 7899999999999999988
Q ss_pred HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh
Q 041151 214 LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP 293 (463)
Q Consensus 214 l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~ 293 (463)
+++|.++|+++++++++|+++..... ...+ .+.+..+++.|+||.+ |++| +|++++ ++
T Consensus 157 ~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~-----------~~~~~d~~~~s~~K~~-gp~G--~G~l~~---~~ 214 (381)
T PRK02948 157 IAEIGALLKKYNVLFHSDCVQTFGKL-----PIDV-----------FEMGIDSLSVSAHKIY-GPKG--VGAVYI---NP 214 (381)
T ss_pred HHHHHHHHHHcCCEEEEEChhhcccc-----ccCc-----------ccCCCCEEEecHHhcC-CCCc--EEEEEE---cC
Confidence 56777888899999999987664211 1121 2223457889999987 8888 799885 44
Q ss_pred hH-HHHHHh----hhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 041151 294 KT-VDEIYK----IAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT 367 (463)
Q Consensus 294 ~~-~~~l~~----~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~ 367 (463)
++ ...+.. ... ..++++.+.+.++.++++ ...++.++.+++++++++++.+.|+++ |+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~ 283 (381)
T PRK02948 215 QVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAE----------NILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVE 283 (381)
T ss_pred CCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEe
Confidence 43 111110 001 245678888888887764 223456678889999999999999988 6655432
Q ss_pred C-ceeEE--eeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC----------------CCCcEEEEE
Q 041151 368 E-GAMYS--FPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK----------------EGIFHLRTT 428 (463)
Q Consensus 368 ~-g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~----------------~~~~~lRis 428 (463)
. .++.+ .+.+..+. . +..++. ..|.++||.+++|..|... ...+++|+|
T Consensus 284 ~~~~~~~~~i~~~~~~~----------~-~~~~~~-~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis 351 (381)
T PRK02948 284 GHSTSCLPHIIGVTIKG----------I-EGQYTM-LECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFS 351 (381)
T ss_pred CCCccCcCCEEEEEeCC----------C-CHHHHH-HhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEE
Confidence 2 22211 11112121 0 133333 4467889999998864210 123589999
Q ss_pred ec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 429 IL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 429 ~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
++ ++++|++++++.|++++++++
T Consensus 352 ~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 352 FGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99 799999999999999876654
No 142
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=5.6e-24 Score=215.29 Aligned_cols=218 Identities=15% Similarity=0.138 Sum_probs=163.5
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------c
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------F 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~ 162 (463)
+..|+.+. ...|++.||++.+ .+++++++|+++++..++.+++ ++||+|+++ .
T Consensus 77 y~R~~~Pt-~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~-~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~ 146 (427)
T PRK07049 77 YSRFNHPN-SEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFV-RPGDVILHSQPLYGGTETLLAKTFRNF 146 (427)
T ss_pred ccCCCCcC-HHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHhc
Confidence 45666654 5799999999874 4578888888999999999998 999999997 2
Q ss_pred CceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh---CCeEEEeccccccccc
Q 041151 163 HTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ---ENLVLLGDEVYQQNIY 239 (463)
Q Consensus 163 g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~---~~~~vi~Deay~~~~~ 239 (463)
|+++..-....|. +.+++.+.+.... +++|+|++++||||||.+++.+++.+|++.|++ ++++||+||+|....+
T Consensus 147 Gi~~v~~~~~~d~-~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~ 224 (427)
T PRK07049 147 GVGAVGFADGLSE-AAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF 224 (427)
T ss_pred CcEEEEEeCCCCH-HHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc
Confidence 4443111123577 8888777542111 168999999999999999999999999988654 6899999999876432
Q ss_pred CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHH
Q 041151 240 QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMG 318 (463)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~ 318 (463)
. . ++ . . +..|+++|+||.++|++|+|+||++ +++++++.+.+.+. ...+.+++.|.++.
T Consensus 225 -~-~---pl-~---------~--g~divv~S~SK~~gG~~glr~G~vv---~~~~l~~~l~~~~~~~g~~ls~~~a~l~~ 284 (427)
T PRK07049 225 -Q-K---PL-E---------H--GADLSVYSLTKYVGGHSDLVAGAVL---GRKALIRQVRALRSAIGTQLDPHSCWMLG 284 (427)
T ss_pred -C-C---cc-c---------c--CCCEEEEcCceeecCCCCcEEEEEE---CCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 1 1 11 1 1 1348889999999447999999999 68999999988775 45668888888887
Q ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 319 LMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
..|+ . +..+.++..++++.+.+.|++.|++.
T Consensus 285 r~L~-----------t---l~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 285 RSLE-----------T---LVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred cCCC-----------h---HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7764 1 22234556888999999999887654
No 143
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=7.3e-23 Score=207.39 Aligned_cols=313 Identities=15% Similarity=0.094 Sum_probs=206.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCC----CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC--CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRG----IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG--EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~g 155 (463)
++++++++.+++.........+....| +.+|++.+|++++ .+..++++++++++..++..+. . +|
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~SG~~An~~ai~~l~-~~~~g 131 (406)
T PRK13393 61 HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFTSGYVSNWAALSTLG-SRLPG 131 (406)
T ss_pred CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhh-cCCCC
Confidence 789999999988875322112222223 3566677776653 2444555555678999998776 4 78
Q ss_pred CEEEEc-------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 156 DGVVLL-------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 156 d~Vlvp-------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
+.|+++ .|.++.. -...|. +.+++.++... ..++++|++++++||+|.+.+ +++|.++|+
T Consensus 132 ~~I~~~~~~H~s~~~~~~~~g~~~~~-~~~~d~-~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~ 204 (406)
T PRK13393 132 CVILSDELNHASMIEGIRHSRAEKRI-FRHNDP-ADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEICDVAE 204 (406)
T ss_pred CEEEEccchhHHHHHHHHHcCCeEEE-eCCCCH-HHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHHHHHHH
Confidence 877775 1222100 011367 88888776421 115788999999999999988 777788888
Q ss_pred hCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh
Q 041151 223 QENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI 302 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 302 (463)
++++++|+||+|+...++ ... ..+... .++ .+ ..+|+++||||.| |++| ||++ +++++++.+...
T Consensus 205 ~~~~~livDea~~~g~~g-~~G-~g~~~~-~~~----~~-~~~i~~~tlsKa~-g~~G---G~~~---~~~~~~~~l~~~ 269 (406)
T PRK13393 205 KHGAMTYLDEVHAVGLYG-PRG-GGIAER-EGL----AD-RLTIIEGTLAKAF-GVMG---GYIT---GSAALCDFIRSF 269 (406)
T ss_pred HcCCEEEEECCccccccC-CCC-Cchhhh-cCC----CC-CCeEEEEeCchhh-cccC---ceee---CCHHHHHHHHHh
Confidence 999999999999865552 211 112111 111 21 2368889999999 7777 9998 688999888776
Q ss_pred hh-h--cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC
Q 041151 303 AS-I--ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL 379 (463)
Q Consensus 303 ~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~ 379 (463)
.. . +.+.++..+.++.++|+ +.+.....+.+++++++++.+.|++. |+.+..+.+.++.+ .+.
T Consensus 270 ~~~~~~t~~~~p~~~aa~~aaL~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~v-~~~- 335 (406)
T PRK13393 270 ASGFIFTTSLPPAVAAGALASVR-----------HLKASSAERERHQDRVARLRARLDKA-GIPHLPNPSHIVPV-MVG- 335 (406)
T ss_pred CcCceecCccCHHHHHHHHHHHH-----------HHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCeEEE-EeC-
Confidence 54 1 23445566777766663 12111223456788889999999887 77777777776543 222
Q ss_pred ChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 380 PPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
... +..++...+++++||.+.++.....+.+..++||++. ++++|+++++++|+++++++
T Consensus 336 -~~~----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 336 -DPV----------LCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -CHH----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 110 1344555555557999998765554445568999999 89999999999999987654
No 144
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=1.1e-23 Score=209.97 Aligned_cols=297 Identities=13% Similarity=0.138 Sum_probs=197.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCC-CCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhcCCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDS-RGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIRGEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vl 159 (463)
|+.+++++.+.+.. ..|+.. .-..++++.++++++ ++++ .+++++|+++++..++.+++ ++||.|+
T Consensus 11 ~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g------~~~~~~~~~~~~~t~al~~~~~~~~-~~g~~vl 78 (356)
T cd06451 11 PPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQ------TENGLTFLLSGSGTGAMEAALSNLL-EPGDKVL 78 (356)
T ss_pred CHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhc------CCCCCEEEEecCcHHHHHHHHHHhC-CCCCEEE
Confidence 78888887544322 223221 113456666666664 4344 57788888999999999997 8999999
Q ss_pred Ec---------------cCcee---c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 160 LL---------------FHTTW---K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 160 vp---------------~g~~~---~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
++ .|.++ + +..+.+|+ +.+++.+++. ++++|++++|+||||.+++ +++|.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~---~~~i~~~ 149 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSP-EEIAEALEQH-----DIKAVTLTHNETSTGVLNP---LEGIGAL 149 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCH-HHHHHHHhcc-----CCCEEEEeccCCCcccccC---HHHHHHH
Confidence 86 34444 2 23467899 9999998753 6899999999999999988 5667778
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
|+++|++|++|++|+.. .. +.++... + ..+++.|.+|++ +.| .++||+++ ++++++.+.
T Consensus 150 a~~~~~~li~D~~~~~g----~~-~~~~~~~--------~---~d~~~~s~~K~l-~~p-~g~G~l~~---~~~~~~~~~ 208 (356)
T cd06451 150 AKKHDALLIVDAVSSLG----GE-PFRMDEW--------G---VDVAYTGSQKAL-GAP-PGLGPIAF---SERALERIK 208 (356)
T ss_pred HHhcCCEEEEeeehhcc----Cc-ccccccc--------C---ccEEEecCchhc-cCC-CCcceeEE---CHHHHHHHH
Confidence 88999999999998742 11 1122111 1 235678899999 433 24899995 778877775
Q ss_pred h---hhh----------------hc-ccCChHHHHHHHHhcCCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHhhcC
Q 041151 301 K---IAS----------------IA-LSPNVPAQIFMGLMVNPLKPGDISYEQFV-RESKGILESLRRRARMMTDGFNSC 359 (463)
Q Consensus 301 ~---~~~----------------~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 359 (463)
. ... .. .+++...+.++.++++ ... ...+...++..++++++.+.|.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~----------~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 209 KKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALD----------LILEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred hcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHH----------HHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 100 01 1223333444445442 111 124567778888899999999887
Q ss_pred CCcccccCC---ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc-CeEeeCCCCCCCCCCCcEEEEEec--CCc
Q 041151 360 RNVVCNFTE---GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT-GISTVPGSGFGQKEGIFHLRTTIL--PAE 433 (463)
Q Consensus 360 pg~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gI~v~pg~~f~~~~~~~~lRis~~--~~~ 433 (463)
|+.+..+. ++.++|+.+ +.+ .+...++.. |.++ ||.+.+|..+.. .+++|+|++ +++
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~-L~~~~gI~~~~g~~~~~---~~~iRis~~~~~~~ 341 (356)
T cd06451 279 -GLKLLAKPELRSPTVTAVLV--PEG----------VDGDEVVRR-LMKRYNIEIAGGLGPTA---GKVFRIGHMGEATR 341 (356)
T ss_pred -CCeeccCcccCCCceEEEEC--CCC----------CCHHHHHHH-HHHhCCEEEeccccccc---CCEEEEecCCCCCH
Confidence 77765432 344555433 321 124455544 5555 999999875432 248999998 788
Q ss_pred CcHHHHHHHHHHHH
Q 041151 434 EDMPAIMESFKKFN 447 (463)
Q Consensus 434 e~i~~~~~~l~~~l 447 (463)
+++++++++|++++
T Consensus 342 e~v~~~~~~l~~~~ 355 (356)
T cd06451 342 EDVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998876
No 145
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.1e-23 Score=212.97 Aligned_cols=307 Identities=16% Similarity=0.173 Sum_probs=199.9
Q ss_pred cHHHHHHHHHHhhhcCC-CCCccCCCCC----CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH---hcC
Q 041151 82 PADAIARAKHYLSLTSG-GLGAYSDSRG----IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV---IRG 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~-~~~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~~~ 153 (463)
|+.+++++.+.+..... ....|....+ ..++|+.++++++ .++++|++++|+++++..++.++ + +
T Consensus 30 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~t~~l~~~~~~~~~~~-~ 102 (397)
T TIGR01976 30 PQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANATSLTFLLSRAISRRW-G 102 (397)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCHHHHHHHHHHHHHhcC-C
Confidence 88999999888765321 1133554333 3477777777775 45568999999999998887776 4 7
Q ss_pred CCCEEEEc-----------------cCcee---c--CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCH
Q 041151 154 EGDGVVLL-----------------FHTTW---K--RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSE 211 (463)
Q Consensus 154 ~gd~Vlvp-----------------~g~~~---~--~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~ 211 (463)
|||+|+++ .|+++ + ...+.+|+ +.+++.+++ ++++|++++|+||||.+++
T Consensus 103 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~l~~~i~~------~~~lv~i~~~~n~tG~~~~- 174 (397)
T TIGR01976 103 PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHP-DDLASLLSP------RTRLVAVTAASNTLGSIVD- 174 (397)
T ss_pred CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCH-HHHHHhcCC------CceEEEEeCCCCCCCccCC-
Confidence 99999996 35544 2 22577899 999999976 7999999999999999987
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
+++|.++|+++|+++++|+++... .....+... +..+++.|++|++ | .|+|++++
T Consensus 175 --~~~i~~~~~~~~~~~ivD~a~~~~-----~~~~~~~~~-----------~~d~~~~s~~K~~-g---~~~G~l~~--- 229 (397)
T TIGR01976 175 --LAAITELVHAAGALVVVDAVHYAP-----HGLIDVQAT-----------GADFLTCSAYKFF-G---PHMGILWG--- 229 (397)
T ss_pred --HHHHHHHHHHcCCEEEEehhhhcc-----ccCCCHHHc-----------CCCEEEEechhhc-C---CceEEEEE---
Confidence 777888888999999999998531 112222221 1236678999977 4 46999984
Q ss_pred ChhHHHHHHhhhh-hc----------ccCChHHHHHHHHhcC---CCCC-CCch-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 292 PPKTVDEIYKIAS-IA----------LSPNVPAQIFMGLMVN---PLKP-GDIS-YEQFVRESKGILESLRRRARMMTDG 355 (463)
Q Consensus 292 ~~~~~~~l~~~~~-~~----------~~~~~~~q~~~~~~l~---~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (463)
++++++.+..... .. .+++.....++..+++ .... ..+. ........+..+++..+.++++.+.
T Consensus 230 ~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (397)
T TIGR01976 230 RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVG 309 (397)
T ss_pred cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888777654321 10 1122222222323221 1000 0000 0011112455677777888899999
Q ss_pred hhcCCCcccccC-----CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC--------CCCCC
Q 041151 356 FNSCRNVVCNFT-----EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG--------QKEGI 422 (463)
Q Consensus 356 L~~~pg~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~--------~~~~~ 422 (463)
|++++++++..+ .++++ .+.+. .. +..+ +.+.|.++||.++.|..|. .+...
T Consensus 310 L~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-----------~~~~-l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~ 374 (397)
T TIGR01976 310 LSDLPGVTLYGVARLAARVPTV-SFTVH--GL-----------PPQR-VVRRLADQGIDAWAGHFYAVRLLRRLGLNDEG 374 (397)
T ss_pred HhcCCCEEEeCCCCccCCCceE-EEEeC--Cc-----------CHHH-HHHHHHHCCeEEEeCccchHHHHHHhCCCCCC
Confidence 988867887654 34443 32222 10 1233 4455778899999887664 22234
Q ss_pred cEEEEEec--CCcCcHHHHHHHH
Q 041151 423 FHLRTTIL--PAEEDMPAIMESF 443 (463)
Q Consensus 423 ~~lRis~~--~~~e~i~~~~~~l 443 (463)
+++|||+. ++++|++++++.|
T Consensus 375 ~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 375 GVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CeEEEEeeccCCHHHHHHHHHhC
Confidence 58999998 7889999988764
No 146
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=2.9e-23 Score=206.65 Aligned_cols=299 Identities=13% Similarity=0.108 Sum_probs=203.6
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC--cEEEcCCcHHHHHHHHHHHhcCCCCEE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQTLNCVIRGEGDGV 158 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~V 158 (463)
+++.+.+++...... ....|. .-...+|+.++++++ ++++ .|++++|+++++..++..++ .++|.|
T Consensus 10 ~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~la~~~~------~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~v 77 (355)
T TIGR03301 10 TSATVRDAMLVDWCH---WDSEFN--DVTDQVRDRLLALAG------GDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKL 77 (355)
T ss_pred CCHHHHHHhhhhccC---CCHHHH--HHHHHHHHHHHHHhc------CCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeE
Confidence 366777766552221 112343 224577777777775 4443 68889999999999999997 788876
Q ss_pred EEc---------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHH
Q 041151 159 VLL---------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILR 219 (463)
Q Consensus 159 lvp---------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~ 219 (463)
++. .|.++ ...++.+|+ +.+++.+++. ++++.+++++++||||...+ +++|++
T Consensus 78 i~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~-~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~---~~~i~~ 149 (355)
T TIGR03301 78 LVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDL-NRIEEALAAD----PDITHVATVHHETTTGILNP---LEAIAK 149 (355)
T ss_pred EEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCH-HHHHHHHHhC----CCceEEEEEecCCcccchhH---HHHHHH
Confidence 663 34433 234678899 9999998751 25677888899999999877 678888
Q ss_pred HhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 220 FCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 220 ~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
+|+++++++|+|++++... . ..++.. .+..++++|+||+++|++| +||+++ ++++++.+
T Consensus 150 l~~~~~~~livD~~~s~g~----~-~~~~~~-----------~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~ 208 (355)
T TIGR03301 150 VARSHGAVLIVDAMSSFGA----I-PIDIEE-----------LDVDALIASANKCLEGVPG--FGFVIA---RRDLLEAS 208 (355)
T ss_pred HHHHcCCEEEEEeccccCC----c-ccchhh-----------cCccEEEecCCcccccCCc--eeEEEE---CHHHHHHh
Confidence 9999999999999876421 1 122221 2245789999998756667 699994 88888877
Q ss_pred Hhhh------------------hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhcC
Q 041151 300 YKIA------------------SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNSC 359 (463)
Q Consensus 300 ~~~~------------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 359 (463)
.... ...++++...+.++..+++ .+..+ .++.+++++++++++.+.|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~~~~~~L~~~ 278 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALE----------ELEAEGGVPARIARYRRNRELLVDGLRAL 278 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHH----------HHHHcccHHHHHHHHHHHHHHHHHHHHHc
Confidence 6210 1123556666666666653 12222 4556778899999999999887
Q ss_pred CCcccccC---CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcC
Q 041151 360 RNVVCNFT---EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEE 434 (463)
Q Consensus 360 pg~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e 434 (463)
|+.+..+ .+++++|+.+ |... ..+...+.+.|.++||.+.+|..+.. .++||++. .+.+
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~l~~~gi~i~~~~~~~~----~~iRis~~~~~~~~ 342 (355)
T TIGR03301 279 -GFQPLLPERWQSPIIVSFLY--PDDP---------DFDFDDFYQELKERGFVIYPGKLTLA----DTFRIGTIGEIDAA 342 (355)
T ss_pred -CCeeecCCCCCCCcEEEEEC--CCCC---------cchHHHHHHHHHHCCEEEECCccccc----cEEEEecCCCCCHH
Confidence 7775433 2445666443 3210 01223455667888999999875542 48999985 6889
Q ss_pred cHHHHHHHHHHH
Q 041151 435 DMPAIMESFKKF 446 (463)
Q Consensus 435 ~i~~~~~~l~~~ 446 (463)
+++++++.|+++
T Consensus 343 ~i~~~~~~l~~~ 354 (355)
T TIGR03301 343 DIERLLEAIKDA 354 (355)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 147
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.92 E-value=2.1e-23 Score=211.09 Aligned_cols=304 Identities=14% Similarity=0.114 Sum_probs=201.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+.+.+.. .++.... .+...++++.+.+.. ..+.+++++++++++..+++.... .++
T Consensus 58 ~p~v~~a~~~~~~~~~----~~~~~~~-~~~~~~l~~~l~~~~----~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~ 128 (403)
T PRK05093 58 HPALVKALKEQGEKLW----HISNVFT-NEPALRLAKKLIDAT----FAERVFFANSGAEANEAAFKLARRYACDRHGPE 128 (403)
T ss_pred CHHHHHHHHHHHHhcC----cccCccC-CHHHHHHHHHHHhhC----CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCC
Confidence 7888999988877521 1111111 222335555554332 236899999999999999986520 022
Q ss_pred -CEEEE-c---cCcee------------------cC--CCcc-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 156 -DGVVL-L---FHTTW------------------KR--QQIG-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 156 -d~Vlv-p---~g~~~------------------~~--~~~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
+.|+. . +|... .. .... .|+ +.+++.+.+ ++++|+++ |.||+|.++
T Consensus 129 ~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~aaiiie-p~~~~gg~~ 200 (403)
T PRK05093 129 KTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL-AAVKAVIDD------HTCAVVVE-PIQGEGGVI 200 (403)
T ss_pred CCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH-HHHHHHhcC------CeEEEEEe-cccCCCCCc
Confidence 33443 3 33211 00 0011 177 899888865 78888777 888888775
Q ss_pred --CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 210 --SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 210 --s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
+.+.+++|.++|++||+++|+||+|..+.++ +.. .+.... ++ .. -+.||||++ + +|+|+||++
T Consensus 201 ~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~-g~~-~~~~~~--~~----~p-----di~s~sK~l-~-~G~rig~vv 265 (403)
T PRK05093 201 PATPEFLQGLRELCDQHNALLIFDEVQTGMGRT-GDL-FAYMHY--GV----TP-----DILTSAKAL-G-GGFPIGAML 265 (403)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC-ccc-hhhhhc--CC----CC-----CEEEecccc-c-CCcceEEEE
Confidence 8899999999999999999999999987553 221 121111 11 12 146999999 6 899999999
Q ss_pred ecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---Ccc
Q 041151 288 MTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR---NVV 363 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p---g~~ 363 (463)
+++++++.+.... ..+++.+++.|.++.+.|+ ... ..+.++.++++++++.+.|+++. ++.
T Consensus 266 ---~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~-----------~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 330 (403)
T PRK05093 266 ---TTAEIASHFKVGTHGSTYGGNPLACAVAEAVFD-----------IIN-TPEVLEGVKARRQRFVDGLQKINQKYGVF 330 (403)
T ss_pred ---EcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 5888988887643 3567789999999988763 121 23456788999999999998751 222
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
...+.+|+++|+.+.-+.. .++.+++.. |.++||.+.|+ +.+++|++++ .++++++++++
T Consensus 331 ~~~~~~G~~~~~~l~~~~~----------~~~~~~~~~-l~~~Gv~v~~~-------g~~~lRl~~~~~~~~~~i~~~~~ 392 (403)
T PRK05093 331 SEIRGMGLLIGAELKPQYK----------GRARDFLNA-AAEEGVMVLVA-------GPDVLRFAPSLVIEEADIDEGLA 392 (403)
T ss_pred EeEeeCceEEEEEecCcch----------hHHHHHHHH-HHHCCeEEecC-------CCCEEEEeCCCCCCHHHHHHHHH
Confidence 2344567888855431110 014456555 45579999873 2348999876 68999999999
Q ss_pred HHHHHHHHH
Q 041151 442 SFKKFNDEF 450 (463)
Q Consensus 442 ~l~~~l~~~ 450 (463)
+|++++.++
T Consensus 393 ~l~~~l~~~ 401 (403)
T PRK05093 393 RFEKAVAKV 401 (403)
T ss_pred HHHHHHHHh
Confidence 999988653
No 148
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.92 E-value=3.3e-23 Score=208.42 Aligned_cols=314 Identities=15% Similarity=0.132 Sum_probs=214.3
Q ss_pred cHHHHHHHHHHhhhcCC---CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc----CC
Q 041151 82 PADAIARAKHYLSLTSG---GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR----GE 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~~ 154 (463)
++.+++++.+.+..... ..+.|+. .+...+++++++++. ..+. .++++|++|+|+++++..++.++.. ++
T Consensus 12 ~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~-~~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~ 88 (382)
T TIGR03403 12 DPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYK-GINA-RDLDDIIITSCATESNNWVLKGVYFDEILKG 88 (382)
T ss_pred CHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHH-HcCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence 78899999887765311 2234443 456789999988885 2232 2678999999999999999987621 34
Q ss_pred -CCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHH
Q 041151 155 -GDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN 213 (463)
Q Consensus 155 -gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~ 213 (463)
+++|+++ .|.++ ....+.+|+ +.+++.+++ +++++++++|+||||.+++
T Consensus 89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~-~~l~~~i~~------~t~lv~~~~~~n~tG~~~~--- 158 (382)
T TIGR03403 89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITA-EQVREAITE------KTALVSVMWANNETGMIFP--- 158 (382)
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCH-HHHHHhccc------CCeEEEEEcccCCCccccC---
Confidence 4678875 46665 234567899 999999887 7899999999999999999
Q ss_pred HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh
Q 041151 214 LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP 293 (463)
Q Consensus 214 l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~ 293 (463)
+++|.++|+++|+++++|++++.... +..+. +.+-.+++.|++|.+ |++| +|++++.. ..
T Consensus 159 ~~~I~~la~~~g~~~ivD~a~~~g~~-----~~~~~-----------~~~~D~~~~s~~K~~-gp~G--~g~l~vr~-~~ 218 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQ-----------KAGVDFLSFSAHKFH-GPKG--VGGLYIRK-GV 218 (382)
T ss_pred HHHHHHHHHHcCCEEEEechhhcCCC-----ccCcc-----------ccCCCEEEEcchhhC-CCCc--eEEEEECC-CC
Confidence 55777788899999999999874221 12221 111237889999976 8888 58887622 11
Q ss_pred hHHHHHH---hhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCc
Q 041151 294 KTVDEIY---KIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEG 369 (463)
Q Consensus 294 ~~~~~l~---~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g 369 (463)
.+...+. ... ...++++.+.+.++..+++ ...+..+...+++++.++++.+.|.++||+.+..+..
T Consensus 219 ~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 288 (382)
T TIGR03403 219 ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMR----------LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDRE 288 (382)
T ss_pred CCCCcccCCCCCCCcccCCcChHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 1111110 011 1245677777777777663 1222245567888999999999999888988876532
Q ss_pred ---eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-------------C---CCcEEEEEec
Q 041151 370 ---AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK-------------E---GIFHLRTTIL 430 (463)
Q Consensus 370 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~-------------~---~~~~lRis~~ 430 (463)
+.++.+.++.. +.... ...|.++||.++.|+.|... . ..+.+|+|+.
T Consensus 289 ~~~~~~~~~~~~~~-------------~~~~~-~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~ 354 (382)
T TIGR03403 289 HRVPNTILISIKGV-------------EGEAM-LWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS 354 (382)
T ss_pred CCcCCEEEEEeCCC-------------CHHHH-HHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC
Confidence 22333333310 13333 34478889999988766311 0 1247999999
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHH
Q 041151 431 --PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 431 --~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
++++|++++++.|++++++++.
T Consensus 355 ~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 355 RFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999998887654
No 149
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=6.1e-23 Score=204.82 Aligned_cols=309 Identities=15% Similarity=0.163 Sum_probs=194.8
Q ss_pred cHHHHHHHHHHhhhcCCC---CCccCC--CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC
Q 041151 82 PADAIARAKHYLSLTSGG---LGAYSD--SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~---~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 156 (463)
.+.+++++.+........ .+.... ..-+.++++.+|++++ + +++++|+|+++++..++.+++ ++||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~-~~gd 84 (361)
T cd06452 14 TPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLC-EKGD 84 (361)
T ss_pred CHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhc-CCCC
Confidence 777777777665332111 111110 1124688888888875 3 789999999999999999997 8999
Q ss_pred EEEEc-------------cCcee---cC---CCcccChHHHHHHHHHHHHhc-CCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 157 GVVLL-------------FHTTW---KR---QQIGVLIINDLQQSVAQARSK-GITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 157 ~Vlvp-------------~g~~~---~~---~~~~~d~~~~l~~~l~~~~~~-~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
+|+++ .|+++ +. ..+.+|+ +.+++++++..+. ++++++|++++|+||||...+ +++
T Consensus 85 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~ 160 (361)
T cd06452 85 WVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITP-EGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKK 160 (361)
T ss_pred EEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCH-HHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHH
Confidence 99997 55555 22 1358999 9999998742111 126899999999999998755 778
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
|+++|++++++||+|++|+.... + .+.... +..++++|+||++ + ++.|+||++ .+++++
T Consensus 161 i~~~~~~~~~~vivD~a~~~g~~----~-~~~~~~-----------~~d~~~~s~~K~l-~-~~~~~G~l~---~~~~~~ 219 (361)
T cd06452 161 IAKVCHEYGVPLLLNGAYTVGRM----P-VSGKEL-----------GADFIVGSGHKSM-A-ASAPIGVLA---TTEEWA 219 (361)
T ss_pred HHHHHHHcCCeEEEECCcccCCc----C-CCHHHc-----------CCCEEEecCCccc-c-CCCCeEEEE---ECHHHH
Confidence 88889999999999999985322 1 122221 1348999999999 6 456999999 488888
Q ss_pred HHHHhhhhh-c--------ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-
Q 041151 297 DEIYKIASI-A--------LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF- 366 (463)
Q Consensus 297 ~~l~~~~~~-~--------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~- 366 (463)
+.+.+.... . .+.....+.++.+.+. ...++.+. ..+..++++++.+.|+++||+++..
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~ 288 (361)
T cd06452 220 DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP----------HVKERVKR-WDEEVEKARWFVAELEKIEGIKQLGE 288 (361)
T ss_pred HHHhccccccccceeeeeccccCchHHHHHHHHHH----------HHHHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECC
Confidence 888765431 0 1111112333333321 11222222 2233345578899999988888752
Q ss_pred --CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHH
Q 041151 367 --TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESF 443 (463)
Q Consensus 367 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l 443 (463)
...++ +.+ +.+ ....... .......++ .+.|.++||.+.. .+ ...++|++.. .++++++.+++.|
T Consensus 289 ~~~~~n~-~~~--~~~-~~~~~~~-~~~~~~~~~-~~~L~~~gI~~~~---~~---~~~~~ri~~~g~~~e~~~~l~~al 356 (361)
T cd06452 289 KPKNHDL-MFF--ETP-SFDEIAK-KHKRRGYFL-YSELKKRGIHGIK---PG---LTRYFKLSTYGLTWEQVEYVVDAF 356 (361)
T ss_pred CCCCCce-EEE--EcC-Ccchhhh-hccccchhH-HHHHHHcCceEEc---CC---CceEEEEEecCCCHHHHHHHHHHH
Confidence 23333 332 222 1100000 000112234 4556677998532 11 1237999995 6889999999999
Q ss_pred HHHH
Q 041151 444 KKFN 447 (463)
Q Consensus 444 ~~~l 447 (463)
+++.
T Consensus 357 ~~~~ 360 (361)
T cd06452 357 KEIA 360 (361)
T ss_pred HHHh
Confidence 8654
No 150
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=3.5e-23 Score=208.92 Aligned_cols=298 Identities=10% Similarity=0.054 Sum_probs=197.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--------C
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--------G 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------~ 153 (463)
++.+.+++.+.+...... ..+. ..+....+++.+.+. ...+.+++++++++|+..+++.... +
T Consensus 58 ~p~v~~ai~~~~~~~~~~-~~~~----~~~~~~~l~~~l~~~----~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~ 128 (396)
T PRK04073 58 HPKIIQALKDQADKVTLT-SRAF----HSDQLGPWYEKVAKL----TGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVE 128 (396)
T ss_pred CHHHHHHHHHHHhhcccc-cccc----CCHHHHHHHHHHHhc----CCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCC
Confidence 788999998888763111 1111 123334444444332 2246899999999999999997631 0
Q ss_pred CC-CEEEEc----cCcee-----cC---------------CC-cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc
Q 041151 154 EG-DGVVLL----FHTTW-----KR---------------QQ-IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ 207 (463)
Q Consensus 154 ~g-d~Vlvp----~g~~~-----~~---------------~~-~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~ 207 (463)
+| +.|+.. +|... .. .. .-.|+ +.+++.+.+ ++++|+++.++||||.
T Consensus 129 ~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~i~~------~~~~viiep~~~~~G~ 201 (396)
T PRK04073 129 PNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDL-EALKAAITP------NTAAFLVEPIQGEAGI 201 (396)
T ss_pred CCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCH-HHHHHhccc------CeEEEEEcCccCCCCC
Confidence 34 556554 33221 00 00 01167 888888865 7899888899999999
Q ss_pred CCCHH-HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 208 CLSEA-NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 208 ~~s~~-~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
+++.+ .+++|.++|++||+++|+||+|..+..+ +. .... ... +. ..-+.+|||.+ |.+|+|+||+
T Consensus 202 ~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~-g~----~~~~-~~~----~~---~pdi~~~sK~l-g~gg~~ig~~ 267 (396)
T PRK04073 202 NIPPEGFLKAARELCKEENVLFIADEIQTGLGRT-GK----LFAC-DWD----NV---TPDMYILGKAL-GGGVFPISCV 267 (396)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC-cH----HHHh-hhc----CC---CCCEEEecccc-cCCCCcceEE
Confidence 98765 5999999999999999999999976442 11 1111 011 11 11234689999 8888999999
Q ss_pred EecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCcc
Q 041151 287 EMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC--RNVV 363 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--pg~~ 363 (463)
+ +++++++.+..... .+++.+++.|.++.+.|+ ...+ +.+.++.+++++++.+.|+++ +++.
T Consensus 268 ~---~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~-----------~~~~-~~l~~~~~~~~~~l~~~L~~l~~~~i~ 332 (396)
T PRK04073 268 A---ANRDILGVFTPGSHGSTFGGNPLACAVSIAALE-----------VLEE-EKLPERSLELGEYFKEQLKEIDNPMIK 332 (396)
T ss_pred E---EcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 9 58899888865433 567789999999888874 1111 234566677788888888875 3344
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
...+.| .|+++.+. . ++..++. .|.++||.+.+. +.+++||++. .++++++++++
T Consensus 333 ~~~~~g-~~~~~~~~--~------------~~~~~~~-~l~~~Gv~~~~~-------~~~~iRi~p~l~~t~e~i~~~~~ 389 (396)
T PRK04073 333 EVRGRG-LFIGVELN--E------------PARPYCE-ALKEEGLLCKET-------HETVIRFAPPLVITKEELDWAFE 389 (396)
T ss_pred ceecce-EEEEEEec--c------------hHHHHHH-HHHHCCeEEecC-------CCCEEEEECCcccCHHHHHHHHH
Confidence 445555 44564442 1 1344444 466789999762 1248999965 88999999999
Q ss_pred HHHHHH
Q 041151 442 SFKKFN 447 (463)
Q Consensus 442 ~l~~~l 447 (463)
+|++++
T Consensus 390 ~l~~~l 395 (396)
T PRK04073 390 KIKAVL 395 (396)
T ss_pred HHHHHh
Confidence 998875
No 151
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=4e-23 Score=207.18 Aligned_cols=298 Identities=15% Similarity=0.137 Sum_probs=202.6
Q ss_pred cHHHHHHHHHHhhhcCCCCC----ccCC--CCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHHhcC-
Q 041151 82 PADAIARAKHYLSLTSGGLG----AYSD--SRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCVIRG- 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~----~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~- 153 (463)
|+.+++++.+.+........ .+++ .....++|+.++++++ .+ +++|++|+|+++++..++.++. .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~-~~ 84 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG-RA 84 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh-hc
Confidence 78899999887755321111 1111 2234578888888885 44 6799999999999999999997 6
Q ss_pred --CCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 154 --EGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 154 --~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
+|++|+++ .|.++ ...++.+|+ +.+++.+.+ ++++|++++|+||||.+.+
T Consensus 85 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~l~~------~~~~v~~~~~~~~tG~~~~ 157 (373)
T cd06453 85 NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDL-EALEKLLTE------RTKLVAVTHVSNVLGTINP 157 (373)
T ss_pred CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCH-HHHHHHhcC------CceEEEEeCcccccCCcCC
Confidence 89999996 34444 334567899 999999987 7999999999999999988
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
+++|+++|++++++|++|++|+.... +..+.. .+..+++.|++|++ +. .++||+++
T Consensus 158 ---~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~-----------~~~d~~~~s~~K~~-~~--~g~g~~~~-- 213 (373)
T cd06453 158 ---VKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQD-----------LGCDFLAFSGHKML-GP--TGIGVLYG-- 213 (373)
T ss_pred ---HHHHHHHHHHcCCEEEEEhhhhcCce-----eeeccc-----------cCCCEEEecccccc-CC--CCcEEEEE--
Confidence 56788888899999999999875322 111111 11236778999998 54 45899984
Q ss_pred CChhHHHHHHhhhhh----------------------cccCChHHHHHHHHhcCCCCCCCchHHHHHH-HHHHHHHHHHH
Q 041151 291 IPPKTVDEIYKIASI----------------------ALSPNVPAQIFMGLMVNPLKPGDISYEQFVR-ESKGILESLRR 347 (463)
Q Consensus 291 ~~~~~~~~l~~~~~~----------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 347 (463)
++++++.+...... ..+++.....++..+++ ...+ ..+.++++.++
T Consensus 214 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~----------~l~~~g~~~~~~~~~~ 282 (373)
T cd06453 214 -KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAID----------YLEKIGMEAIAAHEHE 282 (373)
T ss_pred -chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHH----------HHHHcCHHHHHHHHHH
Confidence 78888776643210 01233334444444432 1111 23556777888
Q ss_pred HHHHHHHHhhcCCCcccccC---CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----
Q 041151 348 RARMMTDGFNSCRNVVCNFT---EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK----- 419 (463)
Q Consensus 348 ~~~~l~~~L~~~pg~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~----- 419 (463)
+++++.+.|+++||+.+..+ .++ ++++.+ +.. +..+ +.+.|+++||.+.+|..+..+
T Consensus 283 ~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~--~~~-----------~~~~-i~~~l~~~gi~i~~g~~~~~~~~~~~ 347 (373)
T cd06453 283 LTAYALERLSEIPGVRVYGDAEDRAG-VVSFNL--EGI-----------HPHD-VATILDQYGIAVRAGHHCAQPLMRRL 347 (373)
T ss_pred HHHHHHHHHhcCCCeEEeCCccccCC-eEEEEE--CCc-----------CHHH-HHHHHHHCCEEeccCccchhHHHHHh
Confidence 89999999999888887633 233 334333 321 1334 445667799999888755321
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHH
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESF 443 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l 443 (463)
...+++|+|++ ++++|++++++.|
T Consensus 348 ~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 348 GVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 12358999999 7999999998764
No 152
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=2.2e-22 Score=197.26 Aligned_cols=312 Identities=17% Similarity=0.151 Sum_probs=215.7
Q ss_pred cHHHHHHHHHHhhhcCC----CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSG----GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
.+.+++++.+++..++. ...-++...-+.+|.+.+|+|++ .+..++.+++..++..++.+|+ +++|.
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--------~e~al~f~SGy~AN~~~i~~l~-~~~dl 125 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--------AEAALLFSSGFVANLGLLSALL-KKGDL 125 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------CCcEEEEcccchhHHHHHHHhc-CCCcE
Confidence 77899999999988642 22234444445788889999985 4556666666889999999998 89999
Q ss_pred EEEc--------cCcee---cCCCcc-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 158 VVLL--------FHTTW---KRQQIG-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 158 Vlvp--------~g~~~---~~~~~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
|+.+ .|++. ....+. -|+ +.||+.+++.+..+++.++|+...-....|.+.+ +.+|++++++|+
T Consensus 126 i~~D~lnHASiidG~rls~a~~~~f~HnD~-~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~ 201 (388)
T COG0156 126 IFSDELNHASIIDGIRLSRAEVRRFKHNDL-DHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYG 201 (388)
T ss_pred EEEechhhhhHHHHHHhCCCcEEEecCCCH-HHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhC
Confidence 9987 44444 111222 466 9999999986433323566666688888999987 777888888999
Q ss_pred eEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-
Q 041151 226 LVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS- 304 (463)
Q Consensus 226 ~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 304 (463)
+++++||+|+...++ +...... ..+|+ ......|+++||||+| |..| ||+. ++..+++.+.....
T Consensus 202 a~L~VDEAHa~Gv~G-~~GrG~~----e~~g~--~~~~vdi~~gTlsKAl-Gs~G---g~v~---g~~~~~d~L~~~ar~ 267 (388)
T COG0156 202 ALLYVDEAHAVGVLG-PNGRGLA----EHFGL--EPEEVDIIVGTLGKAL-GSSG---GYIA---GSAALIDYLRNRARP 267 (388)
T ss_pred cEEEEEccccccccC-CCCccHH----HHhCC--CCccceEEEEEchhhh-cccC---ceee---CcHHHHHHHHHhCCc
Confidence 999999999999884 2222222 22222 2233579999999999 6555 8888 79999999988754
Q ss_pred hcc--cCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChh
Q 041151 305 IAL--SPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPK 382 (463)
Q Consensus 305 ~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~ 382 (463)
..+ +.++..-.++...+ +.+++...++++++++...+.+.+... |+.+.+.......+ -+.-+..
T Consensus 268 ~ifStalpP~~aaa~~~al-----------~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I~pv-~~gd~~~ 334 (388)
T COG0156 268 FIFSTALPPAVAAAALAAL-----------RILEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPIIPV-ILGDEER 334 (388)
T ss_pred eeccCCCCHHHHHHHHHHH-----------HHHHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCeeee-EeCCHHH
Confidence 222 22333333344443 244555678888999999998777665 66654444443332 2332221
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
...+...++++ ||.+.+......+.+...+|+++. ++++||+.+++.|.++
T Consensus 335 ------------a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 335 ------------ALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ------------HHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 34555555555 999999887777777889999999 8999999999988764
No 153
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=1.2e-22 Score=202.96 Aligned_cols=304 Identities=16% Similarity=0.198 Sum_probs=222.1
Q ss_pred cHHHHHHHHHHhhhcCCCCC--ccCCC----CCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHH---h
Q 041151 82 PADAIARAKHYLSLTSGGLG--AYSDS----RGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCV---I 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~--~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l---~ 151 (463)
|..+++++.+.+..+..+.+ .|... .-+.+.|+.+++|++ .+ .++|++|.|++++++.+..++ .
T Consensus 35 p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~tT~aln~va~~l~~~~ 108 (405)
T COG0520 35 PQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRGTTEALNLVARGLGRSL 108 (405)
T ss_pred CHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChhHHHHHHHHHhhhhh
Confidence 89999999988765433332 22222 234688999999987 66 489999999999999999998 5
Q ss_pred cCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 152 RGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 152 ~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
.+||+|++. .|.++ ..+++.++. +.++..+++ +||+|.+++-+|.||.+.+
T Consensus 109 -~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~-~~~~~~i~~------~Tklvais~vSn~tG~~~p 180 (405)
T COG0520 109 -KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDL-DALEKLITP------KTKLVALSHVSNVTGTVNP 180 (405)
T ss_pred -cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCH-HHHHHhcCC------CceEEEEECccccccccch
Confidence 799999996 46666 346888999 999998887 8999999999999999987
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
+++|+++|+++|+++++|-+++.... +.++..+ +..+++.|.+|+++|+.| +|.+++
T Consensus 181 ---v~~I~~la~~~ga~v~VDaaq~~~h~-----~idv~~l-----------~~Df~afsgHKwl~gP~G--iGvLy~-- 237 (405)
T COG0520 181 ---VKEIAELAHEHGALVLVDAAQAAGHL-----PIDVQEL-----------GCDFLAFSGHKWLLGPTG--IGVLYV-- 237 (405)
T ss_pred ---HHHHHHHHHHcCCEEEEECccccCcc-----CCCchhc-----------CCCEEEEcccccccCCCc--eEEEEE--
Confidence 88888999999999999999986433 3444332 244899999997657668 899984
Q ss_pred CChhHHHHHHhhhh----------------------hcccCChHHH-HHHHHhcCCCCCCCchHHHHHHH-HHHHHHHHH
Q 041151 291 IPPKTVDEIYKIAS----------------------IALSPNVPAQ-IFMGLMVNPLKPGDISYEQFVRE-SKGILESLR 346 (463)
Q Consensus 291 ~~~~~~~~l~~~~~----------------------~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 346 (463)
.+++.+.+..... ...+++.+.+ ..+.++++ ...+. ++.+.++-+
T Consensus 238 -r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~----------~~~~ig~~~i~~~e~ 306 (405)
T COG0520 238 -RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALD----------YLLEIGMEAIEAHER 306 (405)
T ss_pred -chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHH----------HHHHHhHHHHHHHHH
Confidence 8888887632110 1122233333 33334432 11222 457788888
Q ss_pred HHHHHHHHHhhcCCCcccccCC----ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC---
Q 041151 347 RRARMMTDGFNSCRNVVCNFTE----GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK--- 419 (463)
Q Consensus 347 ~~~~~l~~~L~~~pg~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~--- 419 (463)
+..+++.+.|+++|++++..|. ++.+.| .++ .. ....+...|.++||.++.|..|..+
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF-~v~--~~------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~ 371 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSF-NVK--GI------------HPHDVATLLDEKGIAVRAGHHCAQPLHR 371 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEE-EeC--CC------------CHHHHHHHHHhCCeEEEeccccccHHHH
Confidence 8899999999999999988653 444444 222 11 2233556788889999999888642
Q ss_pred --CCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 420 --EGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 420 --~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
.-...+|+|+. ++++|++++++.|+++.+
T Consensus 372 ~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 372 LLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred hcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 11234999999 999999999999998764
No 154
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=203.76 Aligned_cols=297 Identities=14% Similarity=0.125 Sum_probs=203.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+++++.+++.+.. ..+ .....+++.++++++.+..+ .+.+++++++++++..+++....-+| +.|++
T Consensus 47 ~p~v~~a~~~~~~~~~----~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~ 117 (377)
T PRK02936 47 HPTVTKAVQEQLDDIW----HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTGKSKIVT 117 (377)
T ss_pred CHHHHHHHHHHHHhcc----ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEE
Confidence 7889999998887621 122 23457899999999976432 35899999999999999996421234 44555
Q ss_pred c----cCcee-----c--------------CCCcc--cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC-CCHHHH
Q 041151 161 L----FHTTW-----K--------------RQQIG--VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC-LSEANL 214 (463)
Q Consensus 161 p----~g~~~-----~--------------~~~~~--~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~-~s~~~l 214 (463)
. +|... . ...+- .|. +.+++.+.+ ++++|++..+++++|.. .+.+.+
T Consensus 118 ~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l 190 (377)
T PRK02936 118 FEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDI-KALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFL 190 (377)
T ss_pred ECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCH-HHHHHhccC------CeEEEEEecccCCCCCccCCHHHH
Confidence 4 22211 0 00011 167 899988875 78999999889998876 578999
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|.++|++||+++|+||+|..+.+. +. ..++... ++ ..+ +.|+||++ + +|+|+||++ ++++
T Consensus 191 ~~l~~l~~~~~~~lI~DEv~~g~g~~-g~-~~~~~~~--~~----~~d-----i~t~sK~l-~-~G~~ig~v~---~~~~ 252 (377)
T PRK02936 191 QEVQTLCKKFGALLIIDEVQTGIGRT-GT-LFAYEQF--GL----DPD-----IVTVAKGL-G-NGIPVGAMI---GKKE 252 (377)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcC-ch-hhHHHhh--CC----CCc-----EEEEcccc-c-CCCccEEEE---EcHH
Confidence 99999999999999999999876552 22 1111111 11 221 24799999 7 899999999 5888
Q ss_pred HHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCc
Q 041151 295 TVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----CRNVVCNFTEG 369 (463)
Q Consensus 295 ~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~pg~~~~~~~g 369 (463)
+.+.+..... .+++.+++.|.++.++|+. .. .+...++++++.+.+.+.|++ ++.+....+ .
T Consensus 253 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~-----------~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~ 319 (377)
T PRK02936 253 LGTAFGPGSHGSTFGGNPLAMAAAKEVLQV-----------IK-QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG-K 319 (377)
T ss_pred HHhhccCCCCCCCCCCCHHHHHHHHHHHHH-----------HH-hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-c
Confidence 8888865443 4567899999999998741 11 123455666777777777765 232222233 4
Q ss_pred eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 370 AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
|+++|+.+. . +...+...|.++||.+.|+. .+++||++. .+++++++++++|++++
T Consensus 320 g~~~~i~~~--~-------------~~~~~~~~l~~~gv~v~~~g-------~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 320 GLMIGIECT--E-------------EVAPVIEQLREEGLLVLSAG-------PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ceEEEEEec--c-------------hHHHHHHHHHHCCeEEecCC-------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 578886553 1 12334556788999998842 348999964 88999999999998753
No 155
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.91 E-value=6.7e-23 Score=208.34 Aligned_cols=314 Identities=12% Similarity=0.105 Sum_probs=200.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+++... ..|+...+..++..++++.+.+.++. ..++|++++|+++++..++..+.. .+++.|++
T Consensus 54 ~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~ 127 (413)
T cd00610 54 HPEVVEALKEQLAKL----THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEAVEAALKLARAYTGRKKIIS 127 (413)
T ss_pred CHHHHHHHHHHHHhC----cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEE
Confidence 788999998888652 34544434556667777777665553 578999999999999999998731 46788888
Q ss_pred c----cCce----------------------e---cCC-------CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCC
Q 041151 161 L----FHTT----------------------W---KRQ-------QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNP 204 (463)
Q Consensus 161 p----~g~~----------------------~---~~~-------~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NP 204 (463)
. +|.. + +.+ .+..|+ +.|++.+++. +.++++|+++..+|+
T Consensus 128 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~---~~~~~~vi~~p~~~~ 203 (413)
T cd00610 128 FEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDL-EALEEALEEH---PEEVAAVIVEPIQGE 203 (413)
T ss_pred ECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHH-HHHHHHHhcC---CCCEEEEEEccccCC
Confidence 5 2210 1 111 133477 8888888652 114556555555777
Q ss_pred CccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee
Q 041151 205 TGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG 283 (463)
Q Consensus 205 tG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 283 (463)
+|.++ +.+.+++|.++|++|++++|+||+|..+... +. .... . .+ +. ..-+.|+||++ +. |+|+
T Consensus 204 ~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~-g~-~~~~-~---~~----~~---~~d~~t~sK~l-~~-g~~~ 268 (413)
T cd00610 204 GGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT-GK-MFAF-E---HF----GV---EPDIVTLGKGL-GG-GLPL 268 (413)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-cc-hhhH-h---hc----CC---CCCeEEEcccc-cC-cccc
Confidence 79876 6777999999999999999999999875321 11 1111 1 11 11 11245899999 64 8999
Q ss_pred EEEEecCCChhHHHHH--Hhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 041151 284 GYFEMTNIPPKTVDEI--YKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR 360 (463)
Q Consensus 284 G~~~~~~~~~~~~~~l--~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p 360 (463)
||++ +++++++.+ ..... .+++.+++.|.++.+.++ .+.. ..+.++++++.+.+.+.|+++.
T Consensus 269 g~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~-----------~l~~-~~~~~~~~~~~~~l~~~l~~~~ 333 (413)
T cd00610 269 GAVL---GREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLE-----------VLEE-EGLLENAAELGEYLRERLRELA 333 (413)
T ss_pred EEEE---EcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 9998 588888886 23332 456778888888877763 2222 3456677777777777776641
Q ss_pred ---CcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCc
Q 041151 361 ---NVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEED 435 (463)
Q Consensus 361 ---g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~ 435 (463)
++.......+.++++.+..+... ..........+...|.++||.+.|+. ...+|++++ .++++
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gv~v~~~~-------~~~lR~~~~~~~t~~~ 401 (413)
T cd00610 334 EKHPLVGDVRGRGLMIGIELVKDRAT-----KPPDKELAAKIIKAALERGLLLRPSG-------GNVIRLLPPLIITEEE 401 (413)
T ss_pred hhCCcEEEeecCceEEEEEEecCCCc-----CCcchHHHHHHHHHHHHCCeEEeecC-------CCEEEEECCCcCCHHH
Confidence 11111223445666444321000 00000022334455677899999975 237999888 68899
Q ss_pred HHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFN 447 (463)
Q Consensus 436 i~~~~~~l~~~l 447 (463)
+++++++|++++
T Consensus 402 i~~~~~~l~~~l 413 (413)
T cd00610 402 IDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 156
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=1e-22 Score=204.45 Aligned_cols=303 Identities=14% Similarity=0.158 Sum_probs=201.6
Q ss_pred cHHHHHHHHHHhhhcCC--CCCccCC----CCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 82 PADAIARAKHYLSLTSG--GLGAYSD----SRGIPGVRKEVAEFIERRDGYPSD-PELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~--~~~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
|+.+++++.+.+..... ....|+. ..+..++|+.++++++ .+ +++|++|+|+++++..++.+++ ++
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~-~~ 85 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFN------APSSAHVVFTNNATTALNIALKGLL-KE 85 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHhcc-CC
Confidence 78899998887776321 1223433 2456688888888885 33 3589999999999999999987 89
Q ss_pred CCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHH
Q 041151 155 GDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN 213 (463)
Q Consensus 155 gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~ 213 (463)
||+|+++ +|.++ ....+.+|. +.+++.+++ ++++|++++|+||||.+++
T Consensus 86 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~~~~------~~~~v~~~~~~n~tG~~~~--- 155 (376)
T TIGR01977 86 GDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISP-ERIKRAIKT------NTKLIVVSHASNVTGTILP--- 155 (376)
T ss_pred CCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCH-HHHHHhcCC------CCeEEEEECCCCCccccCC---
Confidence 9999996 26555 234567899 999999876 7999999999999999998
Q ss_pred HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh
Q 041151 214 LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP 293 (463)
Q Consensus 214 l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~ 293 (463)
+++|.++|+++|+++|+|++++.... +..+.. .+-.+++.|++|++++.+| +|.+++ .+.
T Consensus 156 ~~~i~~l~~~~~~~livD~a~~~g~~-----~~~~~~-----------~~~D~~~~s~~K~l~~p~g--~g~l~~--~~~ 215 (376)
T TIGR01977 156 IEEIGELAQENGIFFILDAAQTAGVI-----PIDMTE-----------LAIDMLAFTGHKGLLGPQG--TGGLYI--REG 215 (376)
T ss_pred HHHHHHHHHHcCCEEEEEhhhccCcc-----CCCchh-----------cCCCEEEecccccccCCCC--ceEEEE--cCC
Confidence 55677888999999999999986432 112211 1234788999999854455 566665 343
Q ss_pred hHHHHHHhhh----------------h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 041151 294 KTVDEIYKIA----------------S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE-SKGILESLRRRARMMTDG 355 (463)
Q Consensus 294 ~~~~~l~~~~----------------~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 355 (463)
..+..+.... . ...+.+.....++..+++ .+.+. .+.++++.+++.+.+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~l~~~~~~~ 285 (376)
T TIGR01977 216 IKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK----------FIEKIGIANIAKKECMLTEKLLNG 285 (376)
T ss_pred cCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH----------HHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3211111100 0 011223333333433432 12221 355677888888999999
Q ss_pred hhcCCCcccccCC----ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc-CeEeeCCCCCCC-------CCCCc
Q 041151 356 FNSCRNVVCNFTE----GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT-GISTVPGSGFGQ-------KEGIF 423 (463)
Q Consensus 356 L~~~pg~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gI~v~pg~~f~~-------~~~~~ 423 (463)
|.+.+|+.+..+. ....+++.+ +.. +..++ ...|.++ ||.+.+|..+.. ....+
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-----------~~~~~-~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~ 351 (376)
T TIGR01977 286 LREINKVKIYGPADPANRVGVVSFTV--EGI-----------DSEEV-ADILDEKFDIATRTGLHCAPLAHKTIGTFATG 351 (376)
T ss_pred HhcCCCeEEeCCCCccccCCeEEEEE--CCC-----------CHHHH-HHHHhccCCEEEEcccccchHHHHHhCCCCCC
Confidence 9888788776541 122344333 311 23344 4445554 999999876642 11335
Q ss_pred EEEEEec--CCcCcHHHHHHHHHH
Q 041151 424 HLRTTIL--PAEEDMPAIMESFKK 445 (463)
Q Consensus 424 ~lRis~~--~~~e~i~~~~~~l~~ 445 (463)
.+|+++. ++++|++.++++|++
T Consensus 352 ~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 352 TIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEecCCCCCHHHHHHHHHHHhh
Confidence 8999999 899999999999975
No 157
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=1.6e-22 Score=203.16 Aligned_cols=305 Identities=14% Similarity=0.150 Sum_probs=204.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCC-----CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSD-----SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--GE 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~ 154 (463)
|+.+++++.+.+.....+...... ..-..++|+.++++++ .++++|++|+|+++++..++..+.. .+
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~t~~~t~a~~~al~~~~~~~~~ 85 (379)
T TIGR03402 12 DPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLG------AEPDEIIFTSGGTESDNTAIKSALAAQPE 85 (379)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 788999988876542111111000 1113466677777765 5688999999999999999987641 35
Q ss_pred CCEEEEc----------------cCcee---c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 155 GDGVVLL----------------FHTTW---K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 155 gd~Vlvp----------------~g~~~---~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
|++|+++ .|.++ + ..++.+|. +.+++.+++ +++++++++++||||.+++.
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~-~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~--- 155 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDL-EELRAAITD------DTALVSVMWANNETGTIFPI--- 155 (379)
T ss_pred CCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCH-HHHHHhcCC------CcEEEEEEcccCCeeecccH---
Confidence 6788885 36655 2 33466899 999999976 79999999999999999994
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|.++|+++|+++++|++++.... +..+. +.+-.+++.|.+|.+ |++| +|++++ +++
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~g~~-----~~~~~-----------~~~~D~~~~s~~K~~-gp~G--~g~l~v---~~~ 213 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAVGKI-----PIDLK-----------EMNIDMLSLSGHKLH-GPKG--VGALYI---RKG 213 (379)
T ss_pred HHHHHHHHHcCCEEEEECccccccc-----ccCcc-----------cCCCCEEEEcHHHcC-CCCc--eEEEEE---CCC
Confidence 5688889999999999999975221 22221 112347778888955 8778 788876 322
Q ss_pred HHHHHHhhh--------hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccc
Q 041151 295 TVDEIYKIA--------SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS-CRNVVCN 365 (463)
Q Consensus 295 ~~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~pg~~~~ 365 (463)
.. +.... ....+++.....++.++++ ....+.+...++++++++.+.+.|.+ +|++.+.
T Consensus 214 ~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 281 (379)
T TIGR03402 214 TR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAE----------LATEHLEEENTRVRALRDRLEAGLLARIPDARLN 281 (379)
T ss_pred CC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 21 11110 1123344444444444442 23344566778888899999999985 7888776
Q ss_pred cCC-----ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----------------CCcE
Q 041151 366 FTE-----GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----------------GIFH 424 (463)
Q Consensus 366 ~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----------------~~~~ 424 (463)
.+. +.+.+| ++.+. ..+ +...|.++||.+++|..|.... ..+.
T Consensus 282 ~~~~~~~~~~~~~~--~~~~~-------------~~~-~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~ 345 (379)
T TIGR03402 282 GDPTKRLPNTVNIS--FEYIE-------------GEA-ILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGS 345 (379)
T ss_pred CCCccCCCCEEEEE--ecCCC-------------HHH-HHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCce
Confidence 542 223334 33221 333 3456788999999998775421 1357
Q ss_pred EEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 425 LRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 425 lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+|+|++ ++++|++++++.|+++++++.+
T Consensus 346 vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 346 IRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999 8999999999999999887653
No 158
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=3.9e-22 Score=198.77 Aligned_cols=289 Identities=13% Similarity=0.153 Sum_probs=194.0
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCc------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHT------------ 164 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~------------ 164 (463)
+..|+.+. ...|++.+|++.+ . +..++++|+++++..++ .++ ++||+|+++ ++.
T Consensus 46 y~r~~~pt-~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~-~ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 46 YSRTGNPT-RGVLEQAIADLEG------G--DQGFACSSGMAAIQLVM-SLF-RSGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred ccCCCCch-HHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHH-HHh-CCCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 44555543 5789999999975 2 33467777789999876 466 899999997 332
Q ss_pred --eecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 165 --TWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 165 --~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
++ ......|+ +.+++++++ ++++|++++|+||+|. ..++++|+++|+++++++|+|++|....+.
T Consensus 115 G~~v-~~vd~~d~-~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-- 181 (366)
T PRK08247 115 NVRF-VYVNTASL-KAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-- 181 (366)
T ss_pred CceE-EEECCCCH-HHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc--
Confidence 22 11112478 999999887 7999999999999764 577999999999999999999999643221
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
. ++ . .+..|+++|+||+++|.++++.||++. .++++++.+...+. .....+++.|..+...+
T Consensus 182 ~---p~-~-----------~g~di~i~S~sK~~~g~~d~~~G~iv~--~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l 244 (366)
T PRK08247 182 R---PL-E-----------EGADIVIHSATKYLGGHNDVLAGLVVA--KGQELCERLAYYQNAAGAVLSPFDSWLLIRGM 244 (366)
T ss_pred C---ch-h-----------cCCcEEEeecceeccCCCceeeeEEec--ChHHHHHHHHHHHHhcCCCCChHHHHHHHhcc
Confidence 1 11 1 123589999999995555789999984 23678888877665 34566777777776665
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccC-CceeEEeeeccCChhhHHHHhhcCCCChHHHH
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFT-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYC 399 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (463)
+ .+....++++++++.+.+.|++.|++.. ..| .|++|.| .++. ....+ .+....+...++
T Consensus 245 ~--------------tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~-~~~~~--~~~~~l~~~~~~ 306 (366)
T PRK08247 245 K--------------TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQD-EEWVN--PFLKSLKLITFA 306 (366)
T ss_pred C--------------cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECC-HHHHH--HHHHcCCcceEc
Confidence 4 1222344579999999999999988764 344 8999988 3431 11000 000000111122
Q ss_pred HHHHHhcCeEeeCCCCCCCC----------CCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 400 LRLLEATGISTVPGSGFGQK----------EGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 400 ~~ll~~~gI~v~pg~~f~~~----------~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
..+.....+.+.|++.+... -+.+.+|||++. |+.+.+++.|.+++++
T Consensus 307 ~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 307 ESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred cCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 22333456777787655321 024589999996 5788888888888864
No 159
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=4.3e-22 Score=198.95 Aligned_cols=276 Identities=8% Similarity=0.080 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCC--CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------------cCcee----cC
Q 041151 110 PGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---------------FHTTW----KR 168 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---------------~g~~~----~~ 168 (463)
.++|+.++++++ .++ +.|++|+|+++++..++.++. .+||.+++. +|.++ ..
T Consensus 38 ~~~r~~la~l~~------~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~ 110 (363)
T TIGR02326 38 EQIRQQLLALAT------AEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG 110 (363)
T ss_pred HHHHHHHHHHhC------CCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence 466777777775 444 379999999999999999997 788876663 34444 33
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
.++.+|+ +.++++++.. ++++++.+++++||||..++ +++|.++|+++++++++|++++.. .. +.++
T Consensus 111 ~~~~~d~-~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~g----~~-~~~~ 177 (363)
T TIGR02326 111 EVEPPDV-VEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSFG----GI-PIDI 177 (363)
T ss_pred CCCCCCH-HHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccccc----Cc-ccch
Confidence 4567899 9999998751 14677888899999999998 678888999999999999987642 12 2233
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh------------------hh-hcccC
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI------------------AS-IALSP 309 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~------------------~~-~~~~~ 309 (463)
..+ +..+++.|++|+++|++| +||+++ +++.++.+... .+ ..+++
T Consensus 178 ~~~-----------~~D~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~ 241 (363)
T TIGR02326 178 AEL-----------HIDYLISSANKCIQGVPG--FGFVIA---RQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS 241 (363)
T ss_pred hhc-----------CccEEEecCccccccCCc--ceEEEE---CHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence 221 234788999999866667 699995 77777665321 00 12356
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCcccccC---CceeEEeeeccCChhhH
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNSCRNVVCNFT---EGAMYSFPQIRLPPKAI 384 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~---~g~~~~~~~~~~~~~~~ 384 (463)
+...+.++.++++ .+..+ .++++++++++++++.+.|+++ |+.+..+ ..+...++.+ |..
T Consensus 242 ~~~~~~al~~al~----------~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~-- 306 (363)
T TIGR02326 242 PTHVVHAFAQALL----------ELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYS--PED-- 306 (363)
T ss_pred cHHHHHHHHHHHH----------HHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEEC--CCC--
Confidence 6777777766653 12222 4457788999999999999887 7766543 3444555333 321
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe-c-CCcCcHHHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI-L-PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~-~-~~~e~i~~~~~~l~~~l 447 (463)
...+...+.+.|+++||.+.||..+. ..++||++ + .+.+++++++++|++++
T Consensus 307 -------~~~~~~~v~~~L~~~gi~v~~g~~~~----~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 307 -------PDYRFADFYQRLKEQGFVIYPGKVSQ----VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred -------CCCCHHHHHHHHHHCCEEEECCcCCC----CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 00022334456778899999987653 24799996 4 78999999999998875
No 160
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=5.2e-22 Score=200.50 Aligned_cols=309 Identities=13% Similarity=0.090 Sum_probs=215.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
.|+.+++++..... .|. ..+..++++++.+.+.+.+|.+ ..+.+++++|+++++..++..++ ++||+|++
T Consensus 20 ~~~~V~~a~~~~~~-------~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~-~~Gd~Vlv 89 (401)
T PLN02409 20 IPERVLRAMNRPNE-------DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTL-SPGDKVVS 89 (401)
T ss_pred CCHHHHHHhcCCCC-------CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcC-CCCCEEEE
Confidence 36777766643221 222 2356788888888887777753 23478888899999999999987 89999999
Q ss_pred c---------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 161 L---------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 161 p---------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
+ .|.++ ...+..+|+ +.+++++++.. .+++++|++++++||||.+++.+++.++++ |
T Consensus 90 ~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~-~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~ 165 (401)
T PLN02409 90 FRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADL-DILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLD-C 165 (401)
T ss_pred eCCCchhHHHHHHHHHcCCceEEEECCCCCCCCH-HHHHHHHhhCc--CCCccEEEEEeecccccccCCHHHHHHHHh-h
Confidence 7 45555 223445788 99999988510 016899999999999999999777777666 9
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
+++|+++|+|++++.... +..+ ++.+..+++.|.+|++++.+ ++||+++ +++.++++..
T Consensus 166 ~~~g~~~vvD~v~s~g~~-----~id~-----------~~~~~D~~~~s~~K~l~~P~--G~G~l~~---~~~~~~~~~~ 224 (401)
T PLN02409 166 AQHPALLLVDGVSSIGAL-----DFRM-----------DEWGVDVALTGSQKALSLPT--GLGIVCA---SPKALEASKT 224 (401)
T ss_pred hccCcEEEEEcccccCCc-----cccc-----------cccCccEEEEcCccccCcCC--CcceeEE---CHHHHHHHhc
Confidence 999999999999874211 1122 22223477788899994434 5999995 8888888764
Q ss_pred hhh------------------h-cccCChHHHHHHHHhcCCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCC
Q 041151 302 IAS------------------I-ALSPNVPAQIFMGLMVNPLKPGDISYEQFVR-ESKGILESLRRRARMMTDGFNSCRN 361 (463)
Q Consensus 302 ~~~------------------~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~pg 361 (463)
... . ..+++...+.++..+++ ...+ -.++++++++++++++.+.|+++ |
T Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~----------~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g 293 (401)
T PLN02409 225 AKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALD----------LIFEEGLENVIARHARLGEATRLAVEAW-G 293 (401)
T ss_pred CCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHH----------HHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 221 0 22455556666666653 1222 25678889999999999999887 8
Q ss_pred cccccCC-c---eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCc
Q 041151 362 VVCNFTE-G---AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEED 435 (463)
Q Consensus 362 ~~~~~~~-g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~ 435 (463)
+++..+. . +...+ +.+|.+. +..++...+++++||.+.+|..-. ....+||+.. .+.++
T Consensus 294 ~~~~~~~~~~~s~~v~~--~~~p~~~----------~~~~l~~~l~~~~~i~i~~G~~~~---~~~~~Rig~~g~~~~~~ 358 (401)
T PLN02409 294 LKLCTKKPEWRSDTVTA--VVVPEGI----------DSAEIVKNAWKKYNLSLGLGLNKV---AGKVFRIGHLGNVNELQ 358 (401)
T ss_pred CeeccCChhhcccceEE--EeCCCCC----------CHHHHHHHHHHhCCEEEEcCCCcc---cCCEEEEcCCCCCCHHH
Confidence 8776542 2 22334 3444331 245566677789999999887531 2247999999 78999
Q ss_pred HHHHHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFNDEF 450 (463)
Q Consensus 436 i~~~~~~l~~~l~~~ 450 (463)
+..++.+|.+++.++
T Consensus 359 ~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 359 LLGALAGVEMVLKDV 373 (401)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999887754
No 161
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=1.1e-21 Score=196.34 Aligned_cols=280 Identities=10% Similarity=0.051 Sum_probs=191.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCCC--CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------------cCcee---c-
Q 041151 109 IPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---------------FHTTW---K- 167 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---------------~g~~~---~- 167 (463)
..++|+.++++++ .++ +.|++++|+++++..++.++. .+||.|+++ .|+++ +
T Consensus 39 ~~~~~~~l~~l~~------~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~ 111 (368)
T PRK13479 39 TASVRAKLVAIAT------GEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHhC------CCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEEC
Confidence 4677777777765 443 468899999999999999998 899888885 34444 2
Q ss_pred CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccc
Q 041151 168 RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVS 247 (463)
Q Consensus 168 ~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~ 247 (463)
..++.+|+ +.+++.+++. +++++|++++|+||||...+ +++|.++|+++++++|+|+++.. +.. +.+
T Consensus 112 ~~~~~~d~-~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~~----g~~-~~~ 178 (368)
T PRK13479 112 GEDEPPDA-AEVEAALAAD----PRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSSF----GAI-PID 178 (368)
T ss_pred CCCCCCCH-HHHHHHHHhC----CCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccccc----CCc-ccc
Confidence 23467899 9999998751 14678999999999999988 66778888899999999966543 111 122
Q ss_pred hHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh------------------hcccC
Q 041151 248 SKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS------------------IALSP 309 (463)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~------------------~~~~~ 309 (463)
+.. .+..+++.|++|+++|++| +||+++ ++++++.+..... ..+++
T Consensus 179 ~~~-----------~~~d~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 242 (368)
T PRK13479 179 IAE-----------LGIDALISSANKCIEGVPG--FGFVIA---RRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTP 242 (368)
T ss_pred ccc-----------cCceEEEecCccccccCCC--ceEEEE---CHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCC
Confidence 221 1223677899998767788 699995 8888877654321 11345
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCcccccCC---ceeEEeeeccCChhhH
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNSCRNVVCNFTE---GAMYSFPQIRLPPKAI 384 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~---g~~~~~~~~~~~~~~~ 384 (463)
+...+.++.++++ .+.++ .++.++++.++++.+.+.|+++ |+.+..+. .+..+.+.+..+...
T Consensus 243 ~~~~~~~l~~al~----------~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~- 310 (368)
T PRK13479 243 PTHVVAAFYQALL----------ELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAY- 310 (368)
T ss_pred cHHHHHHHHHHHH----------HHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCc-
Confidence 5555555555543 11111 3456678899999999999988 77765332 111122112211110
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe-c-CCcCcHHHHHHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI-L-PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~-~-~~~e~i~~~~~~l~~~l~~~ 450 (463)
+..+ +...|.++||.+.+|..+. ..++|++. + +++++++.+++.|+++++++
T Consensus 311 ---------~~~~-l~~~L~~~gi~v~~g~~~~----~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 311 ---------DFKE-FYERLKEQGFVIYPGKLTQ----VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred ---------CHHH-HHHHHHHCCEEEecCCCCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1234 4555777899999876442 24799986 5 78999999999999988754
No 162
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=9.3e-22 Score=197.91 Aligned_cols=312 Identities=13% Similarity=0.134 Sum_probs=200.7
Q ss_pred cHHHHHHHHHHhhhcCCC-----CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC
Q 041151 82 PADAIARAKHYLSLTSGG-----LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 156 (463)
++.+++++.+........ ...+.....+.++|+.+|++++ .+++++++|+++++..++.+++ ++||
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~g~t~a~~~al~~l~-~~gd 103 (387)
T PRK09331 33 TPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTHGAREGKFAVMHSLC-KKGD 103 (387)
T ss_pred CHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhc-CCCC
Confidence 788899888776442111 1112222346789999999975 2568899999999999999998 8999
Q ss_pred EEEEc-------------cCcee---c---CCCcccChHHHHHHHHHHHHh-cCCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 157 GVVLL-------------FHTTW---K---RQQIGVLIINDLQQSVAQARS-KGITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 157 ~Vlvp-------------~g~~~---~---~~~~~~d~~~~l~~~l~~~~~-~~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
+|+++ .|+++ + +.++.+|+ +.+++.+++..+ .++++++|++++|+||||...+ +++
T Consensus 104 ~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~-~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~ 179 (387)
T PRK09331 104 YVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITP-EAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKK 179 (387)
T ss_pred EEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCH-HHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHH
Confidence 99997 56665 2 35677999 999999975311 1236899999999999998866 788
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
|.++|+++|+++++|++|+.... +.+.... +..+++.|++|++ + ++.++||++ ++++++
T Consensus 180 I~~la~~~g~~livD~a~~~g~~-----~~~~~~~-----------g~D~~~~s~~K~l-~-~~~~~G~l~---~~~~~i 238 (387)
T PRK09331 180 VAKVAHEYGIPFLLNGAYTVGRM-----PVDGKKL-----------GADFIVGSGHKSM-A-ASAPSGVLA---TTEEYA 238 (387)
T ss_pred HHHHHHHcCCEEEEECCcccCCc-----CCCHHHc-----------CCCEEEeeCcccc-c-CCCCEEEEE---ECHHHH
Confidence 88899999999999999985322 1222221 1247899999999 5 455899998 488888
Q ss_pred HHHHhhhh-hc------cc--CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-
Q 041151 297 DEIYKIAS-IA------LS--PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF- 366 (463)
Q Consensus 297 ~~l~~~~~-~~------~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~- 366 (463)
+.+.+... .. ++ .+.....++.+.+ +...+.. ...++..++.+++.+.|++++|+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal----------~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~ 307 (387)
T PRK09331 239 DKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASF----------PHVVERV-KRWDEEVKKARWFVDELEKIEGFKQLGE 307 (387)
T ss_pred hhcccccCCCcccceeeeceecCchHHHHHHHHH----------HHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEEEecc
Confidence 87755421 00 11 1111222222222 1122222 234455677788999999998988773
Q ss_pred -CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHH
Q 041151 367 -TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFK 444 (463)
Q Consensus 367 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~ 444 (463)
+....+.. +..| .+.+ .......+... +.+.|+++||...+.. ....+|+... .+.++++++++.|+
T Consensus 308 ~~~~~~i~~--~~~~-~~~~-~~~~~~~~~~~-~~~~L~~~gI~~~~~~------~~~i~ri~~~g~t~~di~~l~~aL~ 376 (387)
T PRK09331 308 KPRNHDLMK--FETP-SFDE-IAKKHKRRGFF-LYEELKKRGIHGIKPG------ATKEFKLSTYGLTWEQVEYVADAFK 376 (387)
T ss_pred CcCcCCeEE--EeCC-chhH-Hhhhccccchh-HHHHHHHcCceEEccC------CceEEEEEeccCCHHHHHHHHHHHH
Confidence 22222333 2333 1100 00000011223 4555678899843311 1235677774 68899999999999
Q ss_pred HHHHH
Q 041151 445 KFNDE 449 (463)
Q Consensus 445 ~~l~~ 449 (463)
+++++
T Consensus 377 ~i~~~ 381 (387)
T PRK09331 377 EIAEK 381 (387)
T ss_pred HHHHh
Confidence 88765
No 163
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=2.6e-22 Score=203.03 Aligned_cols=324 Identities=14% Similarity=0.062 Sum_probs=204.2
Q ss_pred HHHHHHHHHHh----cccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCC
Q 041151 26 LYLRASELQKE----GKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLG 101 (463)
Q Consensus 26 ~~~~~~~~~~~----~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~ 101 (463)
+.+.+.+++++ +..+++++.|.|+. +. |+.+.++..++ . ...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~------------------------~~-----p~~~~~~~~~~--~---~~~ 49 (398)
T cd00613 4 VLRHLKRLASKNKALDQSMSFLGSGTYKH------------------------NP-----PAVIKRNILEN--E---FYT 49 (398)
T ss_pred HHHHHHHHHhcCcCcccCcccccccccCC------------------------cC-----cHHHHHHhccc--c---Ccc
Confidence 44444445433 33469999999996 33 55554444444 2 123
Q ss_pred ccCC-----CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcC-CcHHHHHHHHHHHhcCC--CCEEEEc------------
Q 041151 102 AYSD-----SRGIPGVRKEVAEFIERRDGYPSDPELIFLTD-GASKGVMQTLNCVIRGE--GDGVVLL------------ 161 (463)
Q Consensus 102 ~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~-G~~~al~~~~~~l~~~~--gd~Vlvp------------ 161 (463)
.|.+ ..|.+++++++++++.+.+|.+ .+++++++ |++++...+..++. .+ ||+|+++
T Consensus 50 ~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~~~~g~~~~~~~~~~~~~-~~~~gd~Vl~~~~~h~~~~~~~~ 126 (398)
T cd00613 50 AYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASLQDEATAAAEAAGLAAIR-AYHKRNKVLVPDSAHPTNPAVAR 126 (398)
T ss_pred cCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceeccCchHHHHHHHHHHHHh-cccCCCEEEEcCccCcchHHHHH
Confidence 4555 6899999999999999888853 44676666 44455555555655 66 9999997
Q ss_pred -cC----cee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 162 -FH----TTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 162 -~g----~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
.| .++ ....+.+|+ +.+++++.+ ++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+
T Consensus 127 ~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~ 196 (398)
T cd00613 127 TRGEPLGIEVVEVPSDEGGTVDL-EALKEEVSE------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDG 196 (398)
T ss_pred HhcccCCcEEEEeccCCCCCcCH-HHHHHhcCC------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEe
Confidence 33 444 233456899 999998876 79999999985 899984 346999999999999999999
Q ss_pred cccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCC---CCceeEEEEecCCChhHHHHHHhh-------
Q 041151 233 VYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGE---CGQRGGYFEMTNIPPKTVDEIYKI------- 302 (463)
Q Consensus 233 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~---~G~R~G~~~~~~~~~~~~~~l~~~------- 302 (463)
++..... ..... ..+..+++.|+||++ +. .|+++||+++ ++++++.+...
T Consensus 197 ~~~~~~~-----~~~~~-----------~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~---~~~~~~~~~~~~~~~~~~ 256 (398)
T cd00613 197 DNLNLTG-----LKPPG-----------EYGADIVVGNLQKTG-VPHGGGGPGAGFFAV---KKELVRFLPGRLVGVTKD 256 (398)
T ss_pred ccccccC-----CCChH-----------HcCCCEEEeeccccC-CCCCCCCCceeEEEE---hhhhHhhCCCCeeccccc
Confidence 8764321 11111 112358999999986 32 2789999995 77776654110
Q ss_pred -----------------------hhhcccC-ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041151 303 -----------------------ASIALSP-NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS 358 (463)
Q Consensus 303 -----------------------~~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 358 (463)
.....+. +...|.+...+... .....++++++++++++++.+.|++
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~----------~~~g~~~~~~~~~~~~~~l~~~L~~ 326 (398)
T cd00613 257 AEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL----------GPEGLKEIAERAHLNANYLAKRLKE 326 (398)
T ss_pred cCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001111 12233333322210 1122455778899999999999998
Q ss_pred CCCcccccCCceeE--EeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcC
Q 041151 359 CRNVVCNFTEGAMY--SFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEE 434 (463)
Q Consensus 359 ~pg~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e 434 (463)
+++.. .+.+.++ ++++++.+.+. +..+++. .|.++||.+.... ..+.+.+|+++. ++++
T Consensus 327 ~~~~~--~~~~~~~~~v~~~~~~~~~~----------~~~~~~~-~L~~~gi~~~~~~----~~~~~~lRis~~~~~t~e 389 (398)
T cd00613 327 VGGVL--PFNGPFFHEFVLRLPPLYGI----------RAEDLAK-ALIDGGFHAPTMY----LPVDGTLMIEPTETETKE 389 (398)
T ss_pred cCCcc--cCCCCeeEEEEEEcCCcchH----------HHHHHHH-hhhhcCccccccc----cCCCCeEEEEcCCCCCHH
Confidence 74443 2334444 34333211010 1344444 4567799764422 123357999999 8999
Q ss_pred cHHHHHHHH
Q 041151 435 DMPAIMESF 443 (463)
Q Consensus 435 ~i~~~~~~l 443 (463)
|++++++.|
T Consensus 390 did~~~~~L 398 (398)
T cd00613 390 ELDALLEAL 398 (398)
T ss_pred HHHHHHHhC
Confidence 999998764
No 164
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=6.3e-22 Score=199.66 Aligned_cols=205 Identities=14% Similarity=0.182 Sum_probs=153.5
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c---------------CceecCC
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F---------------HTTWKRQ 169 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~---------------g~~~~~~ 169 (463)
-..+|++.+|++++ .+.+++++|+++++..++.+++ ++||+|+++ + |+++ ..
T Consensus 77 t~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~-~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~-~~ 146 (418)
T PLN02242 77 TVLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLC-SSGGHVVASNTLYGGTHALLAHFLPRKCNITT-TF 146 (418)
T ss_pred hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHhhhhccCceE-EE
Confidence 35788888888874 4667889999999999999998 899999997 1 1111 11
Q ss_pred CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 170 QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 170 ~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
....|+ +.+++++++. ++|+|++++|+||||.+.+ +++|+++|++++++||+|++|..+.+ ...
T Consensus 147 ~d~~d~-e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~-------~~~ 210 (418)
T PLN02242 147 VDITDL-EAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVL-------SPA 210 (418)
T ss_pred cCCCCH-HHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCC-------CHH
Confidence 112377 9999988751 3999999999999999975 78888899999999999999976543 111
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCce-eEEEEecCCChhHHHHHHhhhh---hcccCChHHHHHHHHhcCCCC
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR-GGYFEMTNIPPKTVDEIYKIAS---IALSPNVPAQIFMGLMVNPLK 325 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~ 325 (463)
.+ + ..|+++|+||.+ +.+|++ +||++ +++++++.+.+.+. ...+.+...|.++..++...
T Consensus 211 ~~--------g---~divv~S~SK~l-~g~g~~~gG~iv---~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~- 274 (418)
T PLN02242 211 RL--------G---ADVVVHSISKFI-SGGADIIAGAVC---GPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP- 274 (418)
T ss_pred Hc--------C---CcEEEEeCcccc-CCCCCceEEEEE---cCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-
Confidence 11 1 358999999999 778887 58888 68899888876643 23456677788877776421
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 041151 326 PGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF 366 (463)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~ 366 (463)
.+..+.+++.++++.+.+.|+++ ++++..
T Consensus 275 -----------tl~~r~~~~~~~a~~la~~L~~~-~~~V~y 303 (418)
T PLN02242 275 -----------HLSLRMKEHCRRAMEYAKRMKEL-GLKVIY 303 (418)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHhC-CCEEEC
Confidence 22234567899999999999987 455543
No 165
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=4.5e-21 Score=195.08 Aligned_cols=313 Identities=11% Similarity=0.031 Sum_probs=190.8
Q ss_pred cHHHHHHHHHHhhh-cCC--CCCccC-CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSL-TSG--GLGAYS-DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~-~~~--~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
|+.+++++...+.. ++. ....|. ...-...+.+...+.+.+.+| .+..+|++++| ++++..++.+++ +|||+
T Consensus 38 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~sg-t~al~~~l~~l~-~~gd~ 113 (416)
T PRK00011 38 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHSG-SQANAAVYFALL-KPGDT 113 (416)
T ss_pred CHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCCc-hHHHHHHHHHhc-CCCCE
Confidence 88899988765432 110 011111 111122232212223333334 34556766665 679999999997 89999
Q ss_pred EEEc---cC---------------cee---c--CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 158 VVLL---FH---------------TTW---K--RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 158 Vlvp---~g---------------~~~---~--~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
|+++ ++ .++ + .+.+.+|+ +.+++.+++. ++++|++++++|| ...+ +
T Consensus 114 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~-~~l~~~i~~~-----~~k~v~~~~~~~~--~~~~---~ 182 (416)
T PRK00011 114 ILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDY-DEVEKLALEH-----KPKLIIAGASAYS--RPID---F 182 (416)
T ss_pred EEEeccccCCccccccccccccceeeEeecCcCcccCCcCH-HHHHHHHHhc-----CCCEEEECCCcCC--CccC---H
Confidence 9997 21 122 1 13478999 9999999753 6899988766665 3334 7
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|.++|+++|+++|+|++|.......+..+..+ . ...++++|+||++ +|.|+||++. .+++
T Consensus 183 ~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~-----------~--~~di~~~S~~K~l---~g~~gg~i~~--~~~~ 244 (416)
T PRK00011 183 KRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPV-----------P--HADVVTTTTHKTL---RGPRGGLILT--NDEE 244 (416)
T ss_pred HHHHHHHHHcCCEEEEECcchhcccccCccCCCC-----------C--CCcEEEecCCcCC---CCCCceEEEe--CCHH
Confidence 8888899999999999999864322111111111 1 1237899999977 5899999995 3468
Q ss_pred HHHHHHhhhh-hcccCChH-HHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CCcee
Q 041151 295 TVDEIYKIAS-IALSPNVP-AQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-TEGAM 371 (463)
Q Consensus 295 ~~~~l~~~~~-~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-~~g~~ 371 (463)
+++.+.+... ...+.+.. .+.++..++. .......++.+++++++++++.+.|++. |+++.. ...++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 314 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFK---------EALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNH 314 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHH---------HHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCe
Confidence 8888877654 22222222 2222222211 0111234567888999999999999987 777653 12237
Q ss_pred EEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC-CC--CCCCCCcEEEEEe------cCCcCcHHHHHHH
Q 041151 372 YSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS-GF--GQKEGIFHLRTTI------LPAEEDMPAIMES 442 (463)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~-~f--~~~~~~~~lRis~------~~~~e~i~~~~~~ 442 (463)
++|+.+. +.++ +.+.+.+.|+++||.+..+. .+ ..+.....+|++. +.+++|++.+++.
T Consensus 315 ~~~i~~~-~~~~-----------~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~ 382 (416)
T PRK00011 315 LVLVDLR-SKGL-----------TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAEL 382 (416)
T ss_pred EEEEeCc-ccCC-----------CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHH
Confidence 7786553 1110 22335567788999997432 12 1111234689965 2467999999999
Q ss_pred HHHHHHH
Q 041151 443 FKKFNDE 449 (463)
Q Consensus 443 l~~~l~~ 449 (463)
|++++..
T Consensus 383 l~~~~~~ 389 (416)
T PRK00011 383 IADVLDN 389 (416)
T ss_pred HHHHHhc
Confidence 9987665
No 166
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=1.8e-21 Score=197.02 Aligned_cols=300 Identities=13% Similarity=0.125 Sum_probs=197.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC--------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG-------- 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------- 153 (463)
++.+.+++.+.+....... .+.......+|.+.++++. ..+.+++++++++|+..+++++. .
T Consensus 59 ~~~i~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~A~e~al~~a~-~~~~~~~g~ 128 (401)
T PRK00854 59 HPKILAAMVEQAGRLTLTS-RAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAEAVETAIKAVR-KWGYEVKGV 128 (401)
T ss_pred CHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHHHHHHHHHHHH-HHHHhccCC
Confidence 7789999998887632111 1111222334555555442 23689999999999999999884 2
Q ss_pred -CC-CEEEEc----cCcee--------c--CCCcc-----------cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc
Q 041151 154 -EG-DGVVLL----FHTTW--------K--RQQIG-----------VLIINDLQQSVAQARSKGITVRAMVIINPGNPTG 206 (463)
Q Consensus 154 -~g-d~Vlvp----~g~~~--------~--~~~~~-----------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG 206 (463)
+| +.|++. +|... + ...+. .|+ +.|++.+.+ ++++|++++|+||+|
T Consensus 129 ~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~le~~i~~------~~~aii~e~~~~~~G 201 (401)
T PRK00854 129 PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDA-EALEAAITP------NTVAFLVEPIQGEAG 201 (401)
T ss_pred CCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCH-HHHHHHhCC------CeEEEEEccccCCCC
Confidence 23 566665 33221 0 01111 478 999998876 799999999999999
Q ss_pred cCCCH-HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEE
Q 041151 207 QCLSE-ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGY 285 (463)
Q Consensus 207 ~~~s~-~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~ 285 (463)
.++++ +.+++|.++|++||+++|+||+|..+.+. +. .+.....++ ..+ +++ +||++ +...+|+||
T Consensus 202 ~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~-g~---~~~~~~~g~----~~D---~~~--~~K~l-~gg~~~ig~ 267 (401)
T PRK00854 202 VIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRT-GK---LLAEEHEGI----EAD---VTL--IGKAL-SGGFYPVSA 267 (401)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC-ch---HhHHhhcCC----CCC---EEE--ecccc-cCCccCeEE
Confidence 99974 45999999999999999999999865441 11 111100111 111 222 47999 544479999
Q ss_pred EEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-
Q 041151 286 FEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV- 363 (463)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~- 363 (463)
++ +++++++.+..... .+++.+++.|.++.+.|+ .+.. ..+.+.++++.+++.+.|+++ +..
T Consensus 268 v~---~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~-----------~l~~-~~~~~~~~~~~~~l~~~L~~~-~~~~ 331 (401)
T PRK00854 268 VL---SNSEVLGVLKPGQHGSTFGGNPLACAVARAALK-----------VLTE-EGMIENAAEMGAYFLEGLRSI-RSNI 331 (401)
T ss_pred EE---EcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHH-----------HHHH-cCHHHHHHHHHHHHHHHHHhh-ccCc
Confidence 99 58888888765433 456678889988888874 2222 236678888889999999886 322
Q ss_pred --cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHH
Q 041151 364 --CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAI 439 (463)
Q Consensus 364 --~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~ 439 (463)
...+.|.++.+. +. +.. .+..+++.. |.++||.+.+. +..++|+++. .++++++++
T Consensus 332 ~~~~~g~g~~~~i~-~~-~~~----------~~~~~~~~~-L~~~GV~v~~~-------~~~~lR~~p~~~~t~e~i~~~ 391 (401)
T PRK00854 332 VREVRGRGLMLAVE-LE-PEA----------GGARQYCEA-LKERGLLAKDT-------HDHTIRLAPPLVITREQVDWA 391 (401)
T ss_pred eEEEeccceEEEEE-Ee-cCc----------hhHHHHHHH-HHHCCeEEecC-------CCCEEEEeCCcccCHHHHHHH
Confidence 123455555542 21 111 013455544 55679999652 2248999975 789999999
Q ss_pred HHHHHHHHH
Q 041151 440 MESFKKFND 448 (463)
Q Consensus 440 ~~~l~~~l~ 448 (463)
+++|++++.
T Consensus 392 i~~l~~~l~ 400 (401)
T PRK00854 392 LEQIAKVLA 400 (401)
T ss_pred HHHHHHHhh
Confidence 999998763
No 167
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=1.6e-21 Score=193.41 Aligned_cols=282 Identities=13% Similarity=0.040 Sum_probs=193.2
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC------------CC--CEEEEc---
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG------------EG--DGVVLL--- 161 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------------~g--d~Vlvp--- 161 (463)
....|....+..++++++++++.+..|.+.+++++++|+|+++++..++.++. . ++ +.|+++
T Consensus 26 ~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~ 104 (345)
T cd06450 26 IDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAAR-DRARKRLKAGGGRGIDKLVIVCSDQA 104 (345)
T ss_pred CCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHH-HHhhhhhhcccccccCCeEEEEcCcc
Confidence 34558888889999999999999888876556689999999999999999875 2 23 366665
Q ss_pred ----------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeE
Q 041151 162 ----------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLV 227 (463)
Q Consensus 162 ----------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ 227 (463)
.|.++ ....+.+|+ +.|++.+.+....+.++++|++++|+||||.+.+ +++|+++|+++|++
T Consensus 105 h~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~ 180 (345)
T cd06450 105 HVSVEKAAAYLDVKVRLVPVDEDGRMDP-EALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLW 180 (345)
T ss_pred hhHHHHHHHHHhcCeEEeeeCCCCCcCH-HHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCe
Confidence 35554 233458999 9999999875444556888889999999999855 78888899999999
Q ss_pred EEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcc
Q 041151 228 LLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIAL 307 (463)
Q Consensus 228 vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~ 307 (463)
+++|++|+.+.+. ....... ...+ . +-..+..|++|++ + ++.++|++++ +
T Consensus 181 l~vD~a~~~~~~~-~~~~~~~---~~~~----~--~~d~~~~s~~K~l-~-~p~g~g~~~~---~--------------- 230 (345)
T cd06450 181 LHVDAAYGGFLLP-FPEPRHL---DFGI----E--RVDSISVDPHKYG-L-VPLGCSAVLV---R--------------- 230 (345)
T ss_pred EEEechhhHHHhh-ChhhHHH---hcCc----c--ccCEEEEchhHhh-C-CCcchHHHHH---H---------------
Confidence 9999999886541 1111110 0000 1 1124667999976 3 5677898874 2
Q ss_pred cCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CCceeEEeeeccCCh--hhH
Q 041151 308 SPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-TEGAMYSFPQIRLPP--KAI 384 (463)
Q Consensus 308 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-~~g~~~~~~~~~~~~--~~~ 384 (463)
...+.++..++. ....++++++..++++++.+.|.+++++.+.. ++.+++.|. +..+. +.
T Consensus 231 ---~~~~~~~l~~l~------------~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~-~~~~~~~~~- 293 (345)
T cd06450 231 ---ALKLWATLRRFG------------RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFR-LKPSVKLDE- 293 (345)
T ss_pred ---HHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE-ECCcchhhH-
Confidence 233333333331 12244566777888999999999988887654 566666552 22100 11
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C-CcCcHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P-AEEDMPAIMESFKK 445 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~-~~e~i~~~~~~l~~ 445 (463)
+...+.+.|.++|+.+.++..+. +..++|+++. . +.+|++++++.|++
T Consensus 294 ----------~~~~i~~~L~~~g~~~~~~~~~~---~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 294 ----------LNYDLSDRLNERGGWHVPATTLG---GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ----------HHHHHHHHHHhcCCEEEEeeEEC---CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 22234455677776666655443 3458999998 3 88999999999875
No 168
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=2.9e-21 Score=195.37 Aligned_cols=307 Identities=13% Similarity=0.142 Sum_probs=204.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-------CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-------GE 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~~ 154 (463)
++.+.+++.+++.........| ..+...++++.+.+. ...+.+++++++++|+..+++.... .+
T Consensus 57 ~p~v~~A~~~~~~~~~~~~~~~-----~~~~~~~la~~l~~~----~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~ 127 (406)
T PRK12381 57 HPALREALNEQASKFWHTGNGY-----TNEPVLRLAKKLIDA----TFADRVFFCNSGAEANEAALKLARKYAHDRYGSH 127 (406)
T ss_pred CHHHHHHHHHHHhhcccccCcc-----CCHHHHHHHHHHHhh----CCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCC
Confidence 6789999988887521111112 123334455555433 2246999999999999999997521 13
Q ss_pred CCEEEEc----cCcee--------c-------------CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 155 GDGVVLL----FHTTW--------K-------------RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 155 gd~Vlvp----~g~~~--------~-------------~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
...|+.. +|... + ....-.|+ +.+++.+.+ ++++|++ .|.||+|.++
T Consensus 128 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~aavii-EPv~~~gg~~ 199 (406)
T PRK12381 128 KSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDL-NSASALIDD------QTCAVIV-EPIQGEGGVI 199 (406)
T ss_pred CCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCH-HHHHHhccC------CeeEEEE-eCCcCCCCCc
Confidence 3556654 22221 0 00112477 899988865 7888776 6999999765
Q ss_pred --CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 210 --SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 210 --s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
+.+.+++|.++|++||+++|+||+|..+.+. +. ..... .+++ ..+ +.||||.+ + +|+|+||++
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~-G~-~~~~~----~~~v--~pD-----i~t~sK~l-~-gG~~ig~~~ 264 (406)
T PRK12381 200 PADKAFLQGLRELCDRHNALLIFDEVQTGVGRT-GE-LYAYM----HYGV--TPD-----VLTTAKAL-G-GGFPIGAML 264 (406)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCC-cc-hhhhH----hhCC--CCC-----EEEehhhh-h-CCCceEEEE
Confidence 6899999999999999999999999776442 22 11111 1111 111 36999999 6 799999999
Q ss_pred ecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-Cccc-
Q 041151 288 MTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR-NVVC- 364 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p-g~~~- 364 (463)
+++++++.+.... ..+++.+++.+.++.+.|+ .+. ..+++++++++.+++.+.|+++. ...+
T Consensus 265 ---~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~-----------~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 329 (406)
T PRK12381 265 ---TTEKCASVMTVGTHGTTYGGNPLASAVAGKVLE-----------LIN-TPEMLNGVKQRHDWFVERLNTINARYGLF 329 (406)
T ss_pred ---EcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 5888988886644 3467789999999888763 222 23577888899999999888751 1221
Q ss_pred -ccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 365 -NFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 365 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
.....|+++++.+. ... ......+...+.++||.+.+. + .+.+|++++ .++++++++++
T Consensus 330 ~~vrg~Gl~~~~~l~--~~~---------~~~~~~~~~~l~~~Gv~v~~~---g----~~~lRl~p~~~~t~~~i~~~~~ 391 (406)
T PRK12381 330 SEIRGLGLLIGCVLN--AEY---------AGKAKQISQEAAKAGVMVLIA---G----PNVVRFAPALNISEEEITTGLD 391 (406)
T ss_pred EEEecCeEEEEEEec--Cch---------hhHHHHHHHHHHHCCcEEeeC---C----CCEEEEeCCccCCHHHHHHHHH
Confidence 12234667674443 210 012334456678899999763 1 237999988 78999999999
Q ss_pred HHHHHHHHHHHH
Q 041151 442 SFKKFNDEFMEQ 453 (463)
Q Consensus 442 ~l~~~l~~~~~~ 453 (463)
+|.++++++.++
T Consensus 392 ~l~~~l~~~~~~ 403 (406)
T PRK12381 392 RFARACERFVSR 403 (406)
T ss_pred HHHHHHHHHHhc
Confidence 999999877554
No 169
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=6.9e-21 Score=190.77 Aligned_cols=305 Identities=12% Similarity=0.079 Sum_probs=196.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC----CCCE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG----EGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----~gd~ 157 (463)
.+.+++++.+.+.........|+ +..++.+.+.+.+.+..| ++.+++++++|+++++..++.++. + ++++
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~-~~~~~~~~~ 106 (371)
T PRK13520 33 HPIARKAHEMFLETNLGDPGLFP---GTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAAR-NLAKAEKPN 106 (371)
T ss_pred hHHHHHHHHHHHhcCCCCcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHH-hhccCCCce
Confidence 56677888777765222222232 334433444444444444 455688999999999999988775 3 5788
Q ss_pred EEEc-------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 158 VVLL-------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 158 Vlvp-------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
|+++ .|+++ ...++.+|+ +.|++.+++ +++.|++++++||||.+.+ +++|.++
T Consensus 107 vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~-~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l 176 (371)
T PRK13520 107 IVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDV-KAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKI 176 (371)
T ss_pred EEecCcchHHHHHHHHHcCceEEEecCCCCCcCCH-HHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHH
Confidence 9886 45555 334567899 999999987 7888888889999999988 7777888
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
|+++|+++++|++|..+..+.......+ .+ ...+-..+..|.+| + +.++.++|++++ .++++++.+.
T Consensus 177 ~~~~g~~livD~a~~~~~~~~~~~~~~~-~~--------~~~~vd~~~~s~~K-~-~~a~~~~G~~~~--~~~~~~~~l~ 243 (371)
T PRK13520 177 ALENGIFLHVDAAFGGFVIPFLDDPPNF-DF--------SLPGVDSITIDPHK-M-GLAPIPAGGILF--RDESYLDALA 243 (371)
T ss_pred HHHcCCCEEEEecchhHHHHhhcCCCCc-cc--------cCCCCceEEECCcc-c-cCccCCceEEEE--cCHHHHHhhc
Confidence 8899999999999986542100100000 00 11111244467788 4 557889998886 5677777664
Q ss_pred hhhhh---------cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCce
Q 041151 301 KIASI---------ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGA 370 (463)
Q Consensus 301 ~~~~~---------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~ 370 (463)
..... ..+.+.....++..+++... ....++++++..++++++.+.|+++ |+. +..+..+
T Consensus 244 ~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~---------~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 313 (371)
T PRK13520 244 VDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLG---------REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLN 313 (371)
T ss_pred ccCccccCCCCcceEeeccChHHHHHHHHHhhhc---------HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCce
Confidence 22111 11123344455555543100 1123456778888899999999988 887 5555555
Q ss_pred eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 371 MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
++.+ .++. ..+ +...|.++||.+.++.. ..++|+|+. ++++|++++++.|+++++
T Consensus 314 ~v~~---~~~~-------------~~~-v~~~L~~~gi~v~~~~~------~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 314 IVAF---DDPN-------------PDE-VREKLRERGWRVSVTRC------PEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEE---ecCC-------------HHH-HHHHHHHCCceeccCCC------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 4432 3221 233 34556677999987431 237999988 788999999999988764
No 170
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=3.3e-21 Score=192.65 Aligned_cols=210 Identities=12% Similarity=0.102 Sum_probs=153.7
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC-------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH------------- 163 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g------------- 163 (463)
+..|+.+. ...|++++|++.+ .+++++|+|++++|..++.+++ ++||+|+++ ++
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all-~~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALL-GPDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 45665543 5788999998874 4689999999999999999998 899999986 22
Q ss_pred -ceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 164 -TTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 164 -~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
.++... ...|. +.+++++++ ++|+|++++|+||||.+++ +++|+++|++++++||+|++|..+.+ .
T Consensus 115 ~~~v~~~-d~~d~-~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~-~- 181 (382)
T TIGR02080 115 CFRVLFV-DQGDE-QALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPAL-Q- 181 (382)
T ss_pred CeEEEEE-CCCCH-HHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCccccc-C-
Confidence 222111 12477 999999887 7999999999999999988 56777788899999999999986533 1
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
. ++ .+ .. .|+++|+||++.|.++++.|++++ .++++++++...+. .+...+++....+..-+
T Consensus 182 ~---pl-~~--------ga---Divv~S~sK~l~G~~~~~~G~i~~--~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l 244 (382)
T TIGR02080 182 N---PL-AL--------GA---DLVLHSCTKYLNGHSDVIAGAVIA--KDPQVAEELAWWANNLGVTGGAFDSYLTLRGL 244 (382)
T ss_pred C---ch-hh--------CC---CEEEeecceeccCCCCceeEEEEe--CCHHHHHHHHHHHHccCCCCCHHHHHHHHccc
Confidence 1 11 11 21 378899999986678999999875 57888888877665 35556666655554333
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
+ .+..+.++..++...+.+.|++.|.+.
T Consensus 245 ~--------------tl~~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 245 R--------------TLVARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred c--------------hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 2 222334556678888888888776543
No 171
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=7.6e-21 Score=190.13 Aligned_cols=210 Identities=14% Similarity=0.105 Sum_probs=158.8
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCc------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHT------------ 164 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~------------ 164 (463)
+..|+.+. ...|++++|++++ .+++++++|+++++..++.+++ +|||+|+++ ++.
T Consensus 46 Y~R~~~pt-~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 46 YSRRGNPT-RDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeCCCCcc-HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 45666553 5789999999874 2469999999999999999998 899999997 321
Q ss_pred --eecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 165 --TWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 165 --~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
++... ...|. +.+++++++ ++++|++++|+||||.+++ +++|.++|++++++||+|++|.....
T Consensus 116 gi~v~~v-d~~d~-e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~--- 181 (386)
T PRK08045 116 CYRVLFV-DQGDE-QALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL--- 181 (386)
T ss_pred CeEEEEe-CCCCH-HHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc---
Confidence 22100 13578 999998876 7999999999999999998 56677778899999999999986433
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
..++ .. .. .++++|+||++.|.++++.|++++ .++++++++..... .+.+.+++.+..+...|
T Consensus 182 --~~pl-~~--------ga---Divv~S~tK~l~G~~d~~~G~vi~--~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl 245 (386)
T PRK08045 182 --QNPL-AL--------GA---DLVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_pred --CCch-hh--------CC---CEEEeecceeccCCCCceeEEEEe--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 1112 11 22 278999999996678889999985 56788888876654 56667888888777776
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
+. +..+.++..+++..+.+.|++.|.+.
T Consensus 246 ~t--------------l~~R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 246 RT--------------LVPRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred cc--------------HHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 42 33456677888889999998877653
No 172
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=3.6e-21 Score=191.55 Aligned_cols=292 Identities=14% Similarity=0.130 Sum_probs=192.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC-----
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGD----- 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd----- 156 (463)
|+++++++.++..+ |. +..++++++++++.+.+| .+++++|+|+++++..++.+++ ++||
T Consensus 26 ~~~v~~a~~~~~~~-------~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~~al~al~-~~Gd~~~~~ 90 (363)
T TIGR01437 26 SDEVADAQKRGAQN-------YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIAQSVAAVI-TRGNRYLVE 90 (363)
T ss_pred CHHHHHHHHHHHhc-------CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHHHHHHHHh-cCCCcchhh
Confidence 89999999888653 22 346788888888877755 3578999999999999999998 8998
Q ss_pred ----------EEEEc------c-----------Ccee--cCCCcccChHHHHHHHHHHHHhcCCceeEEE-EECCCCCCc
Q 041151 157 ----------GVVLL------F-----------HTTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMV-IINPGNPTG 206 (463)
Q Consensus 157 ----------~Vlvp------~-----------g~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~-l~~p~NPtG 206 (463)
+|++| + |+++ ....+.+|+ +.+++++++ ++++|+ +++|+||+|
T Consensus 91 ~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~-~~le~ai~~------~t~ai~~v~~~~~~~g 163 (363)
T TIGR01437 91 NLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSA-EQLEAAITE------KTAAILYIKSHHCVQK 163 (363)
T ss_pred cccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCH-HHHHHhcCh------hceEEEEEecCCCCcC
Confidence 78887 2 3333 223567999 999999987 789876 568999999
Q ss_pred cCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 207 QCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 207 ~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
.+.+ +++|+++|+++|+++|+|++|+. + ..++.. + + -.+++.|+||++ +|+++|++
T Consensus 164 ~~~~---~~~i~~~a~~~gi~vivD~a~~~----~---~~~~~~----~----g---~D~~~~S~~K~l---~gp~~G~l 219 (363)
T TIGR01437 164 SMLS---VEDAAQVAQEHNLPLIVDAAAEE----D---LQKYYR----L----G---ADLVIYSGAKAI---EGPTSGLV 219 (363)
T ss_pred CcCC---HHHHHHHHHHcCCeEEEECCCCC----c---hHHHHH----c----C---CCEEEEeCCccc---CCCceEEE
Confidence 9988 56678899999999999999972 1 011111 1 1 237789999987 58889998
Q ss_pred EecCCChhHHHHHHhhhhh---cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 287 EMTNIPPKTVDEIYKIASI---ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
+ +++++++.+...... ...........+.++++ .+.+...+..+.+.++++.+.+.|.++||+.
T Consensus 220 ~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~----------~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~ 286 (363)
T TIGR01437 220 L---GKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALE----------QYLSTGKESGAEMVAKLTPFIEALNTLKGVS 286 (363)
T ss_pred E---EcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHH----------HHHccCcccHHHHHHHHHHHHHHHhcCCCeE
Confidence 8 577788776543221 11111112222222221 1222222334455667778999999999988
Q ss_pred cccCC--cee---EEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcC--eEeeCCCCCCCCCCCcEEEEEec-CCcCc
Q 041151 364 CNFTE--GAM---YSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATG--ISTVPGSGFGQKEGIFHLRTTIL-PAEED 435 (463)
Q Consensus 364 ~~~~~--g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--I~v~pg~~f~~~~~~~~lRis~~-~~~e~ 435 (463)
+..+. .+. ..-+.+.... .+. +..+ +.+.|++.| |.+++ .|. .++.+|+++. .+++|
T Consensus 287 ~~~~~~~~~~~~~~~~v~~~~~~--------~g~-~~~~-l~~~L~~~~~~I~~r~--~~~---~~~~~~l~~~~~~~~e 351 (363)
T TIGR01437 287 ASIVQDEAGRDIARAEIRFDESE--------LGM-TAAD-VVQALRQGEPAIYTRG--YKA---NEGIIEIDPRSVTGGQ 351 (363)
T ss_pred EEEecCCCCCcCceEEEEEeccC--------CCC-CHHH-HHHHHhcCCCCEEEee--eee---cCCeEEEEeecCCHHH
Confidence 76321 111 1111122100 011 2334 455677667 66655 232 2347999999 77899
Q ss_pred HHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFN 447 (463)
Q Consensus 436 i~~~~~~l~~~l 447 (463)
++.++++|++++
T Consensus 352 ~~~~~~~l~~~~ 363 (363)
T TIGR01437 352 LDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHhC
Confidence 999999998763
No 173
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=1.5e-21 Score=193.64 Aligned_cols=289 Identities=12% Similarity=0.126 Sum_probs=191.7
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee------cCC-
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW------KRQ- 169 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~------~~~- 169 (463)
+..|+.+ ...+|++++|++.+ .+++++++|+++|+.+++. ++ ++||+|+++ +|+.+ ...
T Consensus 48 Y~R~~~p-~~~~le~~lA~leg--------~~~~v~~~sG~aAi~~~l~-~l-~~GD~VI~~~~~yg~~~~~~~~~~~~~ 116 (364)
T PRK07269 48 YTRTKNP-TRAKLEETLAAIES--------ADYALATSSGMSAIVLAFS-VF-PVGSKVVAVRDLYGGSFRWFNQQEKEG 116 (364)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHH-Hh-CCCCEEEEecCCcCchHHHHHHHHhcC
Confidence 4455544 46899999999973 6799999999999999995 55 899999998 77665 111
Q ss_pred ----CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCc
Q 041151 170 ----QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPF 245 (463)
Q Consensus 170 ----~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~ 245 (463)
.+..|. +.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+ . .
T Consensus 117 ~~~~~~~~d~-~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~-~-~-- 182 (364)
T PRK07269 117 RFHFTYANTE-EELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY-Q-R-- 182 (364)
T ss_pred cEEEEecCCH-HHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C-C--
Confidence 356788 999999987 8999999999999998875 88888889999999999999865332 1 1
Q ss_pred cchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCC
Q 041151 246 VSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPL 324 (463)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~ 324 (463)
++ .. . -.|++.|+||.+.|..+.-.||+++ .++++.++++..+. .+...+++....+...|+
T Consensus 183 -pl-~~--------g---aDivv~S~tK~l~g~~d~~gG~v~~--~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~-- 245 (364)
T PRK07269 183 -PI-EL--------G---ADIVLHSATKYLSGHNDVLAGVVVT--NDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK-- 245 (364)
T ss_pred -ch-hh--------C---CcEEEecCceeccCCCcccceEEEe--CcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC--
Confidence 11 11 1 1389999999994333345788775 46778888876554 344455555555555543
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cc-cCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHH
Q 041151 325 KPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CN-FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRL 402 (463)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 402 (463)
.+..+.++..++...+.+.|++.|++. +. ++.||++.+.- . .... ...+....+...++..+
T Consensus 246 ------------tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~-~-~~~~--~~~f~~~l~~~~~~~sl 309 (364)
T PRK07269 246 ------------TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKV-A-DETR--IPHILNSLKVFTFAESL 309 (364)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEE-C-CHHH--HHHHHHhCCcceEccCC
Confidence 233455666888888999999888753 33 67788777632 2 1110 00000000111122233
Q ss_pred HHhcCeEeeCCCCCCC--C--------CCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 403 LEATGISTVPGSGFGQ--K--------EGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 403 l~~~gI~v~pg~~f~~--~--------~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.....+.+.|++.+.. + -..+.+|||++. |+.+.+++.|.++++
T Consensus 310 G~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 310 GGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred CCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 3334555666544321 0 014589999996 467788888877764
No 174
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.89 E-value=4.4e-21 Score=193.16 Aligned_cols=202 Identities=12% Similarity=0.128 Sum_probs=144.2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee-
Q 041151 105 DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW- 166 (463)
Q Consensus 105 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~- 166 (463)
+..+..+|++++|++++ .+++++++|+++++..++.+++ ++||+|+++ .|+++
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 132 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSAL-KAGDHVVASDTLYGCTFALLNHGLTRYGVEVT 132 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHhhCCeEEE
Confidence 44568999999999985 2467888888999999999998 899999997 23333
Q ss_pred cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC--CeEEEecccccccccCCCCC
Q 041151 167 KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE--NLVLLGDEVYQQNIYQDERP 244 (463)
Q Consensus 167 ~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~--~~~vi~Deay~~~~~~~~~~ 244 (463)
.-+ ..|+ +++++++++ ++++|++++|+||||.+.+ +++|.++|+++ +++||+|++|+...+. .
T Consensus 133 ~vd--~~d~-e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~--~- 197 (400)
T PRK06234 133 FVD--TSNL-EEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ--R- 197 (400)
T ss_pred EEC--CCCH-HHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC--C-
Confidence 111 1277 999999987 8999999999999999988 66677778786 9999999999876441 1
Q ss_pred ccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhh--h-hcccCChHHHHHHHHh
Q 041151 245 FVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIA--S-IALSPNVPAQIFMGLM 320 (463)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q~~~~~~ 320 (463)
++ .. +..|++.|+||++ +.+|+|+ ||++ +++++++.++... . .+...+++....+...
T Consensus 198 --~l-~~-----------g~Divv~S~sK~l-~g~g~~~gG~v~---~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~ 259 (400)
T PRK06234 198 --PL-QL-----------GADVVVHSATKYL-NGHGDVIAGFVV---GKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRG 259 (400)
T ss_pred --ch-hh-----------CCcEEEeeccccc-cCCCCceeEEEE---ecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 11 11 1348999999999 7789875 9988 5888888886542 2 2333444444444333
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 321 VNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
|+ .+..+.++..++...+.+.|++.|.+
T Consensus 260 l~--------------tl~~r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 260 MK--------------TLQIRMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred cC--------------cHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 32 12223444556777788888776543
No 175
>PRK07505 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-20 Score=191.05 Aligned_cols=308 Identities=16% Similarity=0.150 Sum_probs=178.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccC-----CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---C
Q 041151 82 PADAIARAKHYLSLTSGGLGAYS-----DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR---G 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~-----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~ 153 (463)
++++++++.+++.... ....++ ......++++.+++++. . +.++++ +++++...++..+.. .
T Consensus 62 ~p~v~~A~~~~l~~~g-~~~~~~~~~~~~~~~~~~l~~~la~~~~------~--~~~~~~-sG~~a~~~ai~~~~~~~~~ 131 (402)
T PRK07505 62 HPAIIEGAVDALKRTG-SLHLSSSRTRVRSQILKDLEEALSELFG------A--SVLTFT-SCSAAHLGILPLLASGHLT 131 (402)
T ss_pred CHHHHHHHHHHHHHhC-CCCCCccchhhhhHHHHHHHHHHHHHhC------C--CEEEEC-ChHHHHHHHHHHHHhcccC
Confidence 7899999998887632 011111 11123455555555542 2 444455 456788877765431 1
Q ss_pred CCC--EEEEc---cCc------------eecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 154 EGD--GVVLL---FHT------------TWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 154 ~gd--~Vlvp---~g~------------~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
+|+ .|... +|. .+ ..-.-.|+ +.+++.+++ +++++++++|+||||.+++ +++
T Consensus 132 ~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v-~~~~~~d~-~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~ 200 (402)
T PRK07505 132 GGVPPHMVFDKNAHASLNILKGICADETEV-ETIDHNDL-DALEDICKT------NKTVAYVADGVYSMGGIAP---VKE 200 (402)
T ss_pred CCCCCEEEEchhhhHhHHhhhhhhhcCCeE-EEeCCCCH-HHHHHHHhc------CCCEEEEEecccccCCcCC---HHH
Confidence 233 33333 111 11 00011478 999998876 6789999999999999999 567
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
|.++|+++++++|+||+|+...++........ +.++. ...+++|+++|+||++ +.+| ||+++ ++++++
T Consensus 201 i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~----~~~~~--~~~d~~i~~~s~sK~~-~~~G---g~~~~--~~~~~~ 268 (402)
T PRK07505 201 LLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVR----SELDY--RLNERTIIAASLGKAF-GASG---GVIML--GDAEQI 268 (402)
T ss_pred HHHHHHHcCCEEEEECcccccCcCCCCCchHH----HHcCC--CCCCCeEEEEechhhh-hccC---eEEEe--CCHHHH
Confidence 77788899999999999976555221111111 12210 0234689999999999 7665 88764 578888
Q ss_pred HHHHhhhh-hccc--CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEE
Q 041151 297 DEIYKIAS-IALS--PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYS 373 (463)
Q Consensus 297 ~~l~~~~~-~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~ 373 (463)
+.+.+... .+++ ++.++..++.+.++-. ...+..++++.++++.+.+...+.. ...+.+++
T Consensus 269 ~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~g~~~~ 332 (402)
T PRK07505 269 ELILRYAGPLAFSQSLNVAALGAILASAEIH---------LSEELDQLQQKLQNNIALFDSLIPT-------EQSGSFLP 332 (402)
T ss_pred HHHHHhCCCceeCCCCCHHHHHHHHHHHHHH---------hccCcHHHHHHHHHHHHHHHHHHHh-------cCCCCCCC
Confidence 88877654 3332 3345666655554200 0011122334444444433332211 12333332
Q ss_pred eeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 374 FPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
+..+..+... +...+ .+.|.++||.+.++..+..+.+..++||++. .+++|+++++++|++++++
T Consensus 333 i~~~~~~~~~----------~~~~~-~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 333 IRLIYIGDED----------TAIKA-AKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EEEEEeCCHH----------HHHHH-HHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 2112222110 12334 4445678999999754433334468999999 7999999999999988764
No 176
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.89 E-value=3.5e-21 Score=196.13 Aligned_cols=314 Identities=15% Similarity=0.104 Sum_probs=201.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+++++.+++.+. ...+.+..+..+|+++|++++. ..++|++++|+++++..+++.... ...++|+.
T Consensus 66 ~p~v~~ai~~q~~~~---~~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~ 135 (423)
T TIGR00713 66 HPRVVEAVKEALERG---TSYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEATMSAVRLARGYTGRDKIIK 135 (423)
T ss_pred CHHHHHHHHHHHHhC---CcCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 789999999888762 2222245567889999998863 236899999999999999986421 24467776
Q ss_pred c----cCce-----------e-------cC--C-----Ccc---cChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCcc
Q 041151 161 L----FHTT-----------W-------KR--Q-----QIG---VLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQ 207 (463)
Q Consensus 161 p----~g~~-----------~-------~~--~-----~~~---~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~ 207 (463)
. +|.. . +. . ... .|+ +.|++.++.. ..++++|++. .|+| +|.
T Consensus 136 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~i~~~---~~~~aavi~ep~~~~-~G~ 210 (423)
T TIGR00713 136 FEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDL-EALEEVFEEY---GEEIAGVIVEPVAGN-MGV 210 (423)
T ss_pred EcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCH-HHHHHHHHHc---CCcEEEEEEeCCCCC-CCC
Confidence 4 2211 0 00 0 000 167 9999988742 1268899887 8899 798
Q ss_pred CCC-HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 208 CLS-EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 208 ~~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
+.+ .+.+++|.++|++||+++|+||+|..+.++ . .. ... .+++ ..+ +.||||.+ + +|+|+||+
T Consensus 211 ~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~-~~--~~~---~~~~--~pD-----i~t~sK~l-~-~G~pig~v 274 (423)
T TIGR00713 211 VPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-L-GG--AQE---YFGV--EPD-----LTTLGKII-G-GGLPVGAF 274 (423)
T ss_pred cCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-c-ch--hHH---HhCC--Ccc-----hhhhhhhh-c-CCCceeee
Confidence 887 588999999999999999999999887542 1 11 111 1211 121 24799999 6 89999999
Q ss_pred EecCCChhHHHHHHhh---hh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 287 EMTNIPPKTVDEIYKI---AS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~---~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+ +++++++.+... .. .+++.+++.|.++.+.|+... + ....+..++..++.++.+.+.+++. ++
T Consensus 275 ~---~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~ 342 (423)
T TIGR00713 275 G---GRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD-------E-EGVYTELDELAKRLAEGLSEVLEDT-GI 342 (423)
T ss_pred e---EHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh-------c-ccHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 9 588898888632 22 466789999999888874211 0 0023345555666666677767666 44
Q ss_pred cc-ccCCceeEE-eeeccCChhhHHHHhhcCCCChH--HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHH
Q 041151 363 VC-NFTEGAMYS-FPQIRLPPKAIEAAKRAGKVPDV--FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPA 438 (463)
Q Consensus 363 ~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~ 438 (463)
.. ....|.++. ++..+.....-+ ....++. ..+...|.++||.+.++ .|+ .+|+++..+++++++
T Consensus 343 ~~~v~~~g~~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gv~v~~~-~~~------~~~l~~~~t~~~i~~ 411 (423)
T TIGR00713 343 PHTVNRVGSMFSLFFTEEEVTNYAD----AKKSDTELFAKFFHEMLDKGVFLPPS-QFE------ACFLSAAHTEEDIEN 411 (423)
T ss_pred CeEEEeeccEEEEEEecCCCCChhh----hhcccHHHHHHHHHHHHHCCeEEecC-Ccc------ceeeECCCCHHHHHH
Confidence 43 234455443 332211100000 0000111 12333455689998753 232 479998888899999
Q ss_pred HHHHHHHHHHH
Q 041151 439 IMESFKKFNDE 449 (463)
Q Consensus 439 ~~~~l~~~l~~ 449 (463)
++++|.+++++
T Consensus 412 ~~~~l~~~l~~ 422 (423)
T TIGR00713 412 TIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHhh
Confidence 99999998865
No 177
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.89 E-value=8.6e-21 Score=193.03 Aligned_cols=324 Identities=11% Similarity=0.001 Sum_probs=199.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--cCCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI--RGEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~~gd~Vl 159 (463)
++.+.+++.+++.+. .+.+.+..+.+ ...++++.+.+..+.... +.+++++++++++..+++... .++++.|.
T Consensus 59 ~~~i~~a~~~~~~~~---~~~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~e~Alklar~~~~r~~iv~ 133 (425)
T PRK08088 59 HPKVVAAVEAQLKKL---SHTCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAATKRSGVIA 133 (425)
T ss_pred CHHHHHHHHHHHhhC---CCccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEE
Confidence 788889998888763 12222222333 344788888765543332 467777777787777776543 13444444
Q ss_pred Ec---cCcee----------c-CCC-----------------cccC----hHHHHHHHHHHHHhcCCceeEEEEE-CCCC
Q 041151 160 LL---FHTTW----------K-RQQ-----------------IGVL----IINDLQQSVAQARSKGITVRAMVII-NPGN 203 (463)
Q Consensus 160 vp---~g~~~----------~-~~~-----------------~~~d----~~~~l~~~l~~~~~~~~~~~~i~l~-~p~N 203 (463)
+. +|... + ..+ .+.+ + +.|++.+++. ..+.++.+|++. ..+|
T Consensus 134 ~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~l~~~l~~~-~~~~~~aavi~Epi~~~ 211 (425)
T PRK08088 134 FTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAI-ASIERIFKND-AAPEDIAAIIIEPVQGE 211 (425)
T ss_pred ECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHH-HHHHHHHHhc-cCCCceEEEEECcccCC
Confidence 43 22221 0 000 0011 3 5677777521 011257777776 6688
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG 283 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 283 (463)
+.....+.+.+++|.++|++|++++|+||+|..+.+. + ....+ ..+ +.+..+.||||++ + +|+|+
T Consensus 212 ~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~-g----~~~~~-~~~-------~~~pdi~s~sK~l-~-~G~ri 276 (425)
T PRK08088 212 GGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT-G----TLFAM-EQM-------GVAADLTTFAKSI-A-GGFPL 276 (425)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-c----chhHH-hhc-------CCCCCEEEEeccc-c-CCCcc
Confidence 8778889999999999999999999999999975442 1 11111 111 1234579999999 6 89999
Q ss_pred EEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 284 GYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 284 G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
||++ +++++++.+..... .+++.+++.|.++..+|+.. ..+++ .+++++..++.++.+.+.+...|.+
T Consensus 277 g~v~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~-----~~~~~---~~~~~~~~~~~~~~l~~l~~~~~~~ 345 (425)
T PRK08088 277 AGVT---GRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVF-----EQENL---LQKANALGEKLKDGLLAIAEKHPEI 345 (425)
T ss_pred eeeE---ecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHH-----HhcCH---HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999 58999988866553 57788999999999998532 11122 2333433333344444444445443
Q ss_pred ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHH
Q 041151 363 VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIM 440 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~ 440 (463)
....+. |+++|+.+.-+.. +..........+...+.++||.+.|+..|+ +.+|++++ .++++|++++
T Consensus 346 ~~v~g~-G~~~~l~l~~~~~-----~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~-----~~iRl~~~~~~t~~ei~~~i 414 (425)
T PRK08088 346 GDVRGL-GAMIAIELFEDGD-----HSKPNAKLTAQIVARARDKGLILLSCGPYY-----NVLRILVPLTIEDAQIRQGL 414 (425)
T ss_pred EEEecc-ceEEEEEEecCCC-----CCCCCHHHHHHHHHHHHhCCCEEecCCCCC-----CEEEEECCCCcCHHHHHHHH
Confidence 323333 7889976621100 000000012333455667899998865543 37999999 6799999999
Q ss_pred HHHHHHHHH
Q 041151 441 ESFKKFNDE 449 (463)
Q Consensus 441 ~~l~~~l~~ 449 (463)
++|++++.+
T Consensus 415 ~~l~~~l~~ 423 (425)
T PRK08088 415 EIIAQCFDE 423 (425)
T ss_pred HHHHHHHHh
Confidence 999998864
No 178
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.89 E-value=5.1e-21 Score=193.71 Aligned_cols=306 Identities=12% Similarity=0.081 Sum_probs=191.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--------- 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------- 152 (463)
++.+++++.+.+..... .... . ..+..+.+++.+.+..+ .+.+++++++++|+..++.....
T Consensus 49 ~p~v~~a~~~~~~~~~~---~~~~-~-~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~ 119 (400)
T PTZ00125 49 HPKILAALINQAQKLTL---TSRA-F-YNDVLGLAEKYITDLFG----YDKVLPMNSGAEAGETALKFARKWGYEVKGIP 119 (400)
T ss_pred CHHHHHHHHHHHHhccc---cccc-c-cCHHHHHHHHHHHhCCC----CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCC
Confidence 77899999888765311 1111 1 12233444444443222 36889999999999999997631
Q ss_pred CCCCEEEEc----cCcee-----cCC------------C----cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc
Q 041151 153 GEGDGVVLL----FHTTW-----KRQ------------Q----IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ 207 (463)
Q Consensus 153 ~~gd~Vlvp----~g~~~-----~~~------------~----~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~ 207 (463)
..++.|++- +|... ... + .-.|+ ++|++.++.. ++++|+++.++||||.
T Consensus 120 ~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~le~~l~~~-----~~~~v~~ep~~~~~G~ 193 (400)
T PTZ00125 120 ENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV-EALEKLLQDP-----NVAAFIVEPIQGEAGV 193 (400)
T ss_pred CCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH-HHHHHHhCCC-----CeEEEEEcCccCCCCC
Confidence 023556654 22221 000 0 01278 9999988621 7999999888999999
Q ss_pred CCC-HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 208 CLS-EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 208 ~~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
+++ .+.+++|.++|++||+++|+||+|..+.+. +.. ... .. .++ ..+ + .++||++ +.+++|+||+
T Consensus 194 ~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~-G~~-~~~-~~-~~~----~pd---~--~~~sK~l-~~g~~~ig~v 259 (400)
T PTZ00125 194 IVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRT-GKL-LAH-DH-EGV----KPD---I--VLLGKAL-SGGLYPISAV 259 (400)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc-chh-hHH-Hh-cCC----CCC---E--EEEcccc-cCCCcCcEEE
Confidence 886 455999999999999999999999865442 211 111 11 111 111 2 3478999 6444699999
Q ss_pred EecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 041151 287 EMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC----RN 361 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----pg 361 (463)
+ +++++++.+..... .+++.+++.|.++.+.|+ .+.+ ....++.+++.+.+.+.|+++ +.
T Consensus 260 ~---~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~-----------~i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 260 L---ANDDVMLVIKPGEHGSTYGGNPLACAVAVEALE-----------VLKE-EKLAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred E---EcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9 48888888865443 456778888888877653 1111 123344445555555555542 22
Q ss_pred cccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHH
Q 041151 362 VVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAI 439 (463)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~ 439 (463)
+....+ .|.+.++.+..+... +...++.. |.++||.+.|+. .+++||++. .++++++++
T Consensus 325 ~~~~~~-~g~~~~v~~~~~~~~----------~~~~~~~~-l~~~Gv~v~~~~-------~~~lRi~~~~~~~~~~i~~~ 385 (400)
T PTZ00125 325 VKEIRG-KGLLNAIVFDHSDGV----------NAWDLCLK-LKENGLLAKPTH-------DNIIRFAPPLVITKEQLDQA 385 (400)
T ss_pred eEEEec-ccEEEEEEEccCcch----------HHHHHHHH-HHHCCeEEeecC-------CCEEEEECCccCCHHHHHHH
Confidence 233344 455666444322111 13445544 557899998852 247999975 888999999
Q ss_pred HHHHHHHHHHH
Q 041151 440 MESFKKFNDEF 450 (463)
Q Consensus 440 ~~~l~~~l~~~ 450 (463)
+++|.+++.++
T Consensus 386 l~~l~~~l~~~ 396 (400)
T PTZ00125 386 LEIIKKVLKSF 396 (400)
T ss_pred HHHHHHHHHHH
Confidence 99999988775
No 179
>PRK06460 hypothetical protein; Provisional
Probab=99.89 E-value=1.5e-20 Score=187.71 Aligned_cols=202 Identities=14% Similarity=0.142 Sum_probs=138.5
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCceecCC
Q 041151 107 RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTWKRQ 169 (463)
Q Consensus 107 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~~~~ 169 (463)
....+|++++|++++ .. ..+++++| ++++..++.+++ +|||+|+++ .|+++.
T Consensus 45 p~~~~L~~~lA~l~g------~~-~~v~~~sG-~~ai~~~l~al~-~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~-- 113 (376)
T PRK06460 45 PTVLELTKKIVELEN------AE-MGVAFSSG-MGAISTTALALL-KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVD-- 113 (376)
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHh-CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEE--
Confidence 356899999999985 32 35555555 789999999998 899999996 233330
Q ss_pred CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 170 QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 170 ~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
....+..+.+++.+++ ++|+|++++||||||.+++.+ +|+++|+++|++||+|++|+.... ..++
T Consensus 114 ~~~~~~~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~-----~~~l- 178 (376)
T PRK06460 114 ASNPGSDNIIEKAKSK------RYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPIN-----QKPL- 178 (376)
T ss_pred EECCCCHHHHHHhcCC------CceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCcccc-----CChh-
Confidence 0112220334443333 799999999999999999955 567788899999999999975311 1111
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCC
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
. .+..|+++|+||+++|..+.|+||++ +++++++.+.+.+. .+.+.++. .+..+++
T Consensus 179 ----------~-~~~divv~S~sK~l~G~~~~~~G~~~---~~~~l~~~l~~~~~~~g~~~~~~---~a~~~l~------ 235 (376)
T PRK06460 179 ----------E-LGADIVVHSASKFLAGHNDVIAGLAA---GYGKLLNVIDQMRRTLGTSLDPH---AAYLTLR------ 235 (376)
T ss_pred ----------h-cCCCEEEeecceeccCCCCceEEEEe---cCHHHHHHHHHHHHhcCCCCCHH---HHHHHHh------
Confidence 1 12358999999998444457899998 68999999987765 33333332 2233332
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
..++++.+.++..++++.+.+.|++.|.+
T Consensus 236 -----~~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 236 -----GIKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred -----chhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 12344456777889999999999987654
No 180
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.88 E-value=7.6e-21 Score=190.79 Aligned_cols=280 Identities=13% Similarity=0.119 Sum_probs=183.6
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee----------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW---------- 166 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~---------- 166 (463)
+..|+.+. ..+|++.+|++++ ..+.|++ ++++.++..++.+++ ++||+|+++ ++...
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~G-------~~~al~~-~sG~~Ai~~~l~al~-~~Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLEG-------GEEALAF-GSGMAAISATLIGFL-KAGDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHhC-------CCcEEEE-CCHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 44555544 5789999999985 2244555 455679999999998 899999997 22221
Q ss_pred ---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCC
Q 041151 167 ---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDER 243 (463)
Q Consensus 167 ---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~ 243 (463)
.......|+ +.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+...+ . .
T Consensus 125 gi~~~~~~~~d~-~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~-~ 192 (386)
T PRK06767 125 MITHSFCDMETE-ADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-Q-R 192 (386)
T ss_pred CeEEEEeCCCCH-HHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-C-C
Confidence 111122477 889988876 7999999999999999988 67777788899999999999975433 1 1
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhh-h-hcccCChHHHHHHHHh
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIA-S-IALSPNVPAQIFMGLM 320 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~q~~~~~~ 320 (463)
++. . . ..+++.|+||.+ +.+|.|+ ||++ ++++.++.+.+.. . .....+++.+.++...
T Consensus 193 ---pl~-----~----g---~Div~~S~sK~l-~g~g~~~gG~v~---~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~ 253 (386)
T PRK06767 193 ---PLE-----L----G---CDAVVHSATKYI-GGHGDVVAGVTI---CKTRALAEKIRPMRKDIGGIMAPFDAWLLLRG 253 (386)
T ss_pred ---chh-----c----C---CcEEEecCccee-cCCCCceeEEEE---eChHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 111 1 1 137889999999 7788885 8888 5888777764433 3 2333455544444443
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccC-----------CceeEEeeeccCChhhHHHHh
Q 041151 321 VNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NFT-----------EGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~~-----------~g~~~~~~~~~~~~~~~~~~~ 388 (463)
|+ .+..+.++..++...+.+.|+++|++.. ..| .||++.| ++....
T Consensus 254 L~--------------tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf---~l~~~~----- 311 (386)
T PRK06767 254 LK--------------TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISF---SIKGGK----- 311 (386)
T ss_pred CC--------------cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEE---EEcCCH-----
Confidence 32 1223456678899999999999998773 322 3455444 332110
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCC------------C------C--CCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQ------------K------E--GIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~------------~------~--~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
.+...+ .+.|+..++.+.-|..... . . ..+.+|||++. |+.+.+++.|.+++.
T Consensus 312 ----~~~~~f-~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~ 384 (386)
T PRK06767 312 ----EETQAF-INDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQALK 384 (386)
T ss_pred ----HHHHHH-HHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 012333 3446666666665543321 0 0 13589999996 467888888888775
Q ss_pred H
Q 041151 449 E 449 (463)
Q Consensus 449 ~ 449 (463)
+
T Consensus 385 ~ 385 (386)
T PRK06767 385 K 385 (386)
T ss_pred h
Confidence 3
No 181
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.88 E-value=4.5e-20 Score=185.46 Aligned_cols=330 Identities=16% Similarity=0.116 Sum_probs=203.0
Q ss_pred cHHHHHHHHHHhhhcCC----CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSG----GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
.+.+.+++.+++..++. ....|+...++.+|++++|++++ ..+.+++++|.+. ...++.+++ ++||.
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~a-~~~~i~~l~-~~GD~ 84 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG-------TESAILYSDGAST-TSSTVAAFA-KRGDL 84 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHHH-HHHHHHHhC-CCCCE
Confidence 77899999988876431 23347777778999999999986 2356777777554 447787787 99999
Q ss_pred EEEc--------cCceecC---CCcc-cChHHHHHHHHHHHHh--------cCCceeEEEEECCCCCCccCCCHHHHHHH
Q 041151 158 VVLL--------FHTTWKR---QQIG-VLIINDLQQSVAQARS--------KGITVRAMVIINPGNPTGQCLSEANLREI 217 (463)
Q Consensus 158 Vlvp--------~g~~~~~---~~~~-~d~~~~l~~~l~~~~~--------~~~~~~~i~l~~p~NPtG~~~s~~~l~~l 217 (463)
|+++ .+..... ..+. .|. +.+++.++.... ..+++++|++.+++||+|.+.+ +++|
T Consensus 85 Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~-~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i 160 (392)
T PLN03227 85 LVVDRGVNEALLVGVSLSRANVRWFRHNDM-KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKEL 160 (392)
T ss_pred EEEeccccHHHHHHHHHcCCeEEEeCCCCH-HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHH
Confidence 9998 2211100 0011 134 555554433211 1136788888899999999999 6678
Q ss_pred HHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHH
Q 041151 218 LRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVD 297 (463)
Q Consensus 218 ~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 297 (463)
.++|++||+++|+||+|....+ +.... ... ..+|++ ...+..|++.|+||.+ |.+.||++ +++++++
T Consensus 161 ~~l~~~~g~~livDe~~~~g~~-g~~G~-g~~---~~~g~~-p~~~~Div~~slsk~~----g~~gg~v~---~~~~~~~ 227 (392)
T PLN03227 161 VALKEEFHYRLILDESFSFGTL-GKSGR-GSL---EHAGLK-PMVHAEIVTFSLENAF----GSVGGMTV---GSEEVVD 227 (392)
T ss_pred HHHHHHcCCEEEEECccccccc-CCCCC-cHH---HHcCCC-CCCCceEEEeechhhh----hccCcEEe---cCHHHHH
Confidence 8899999999999999984333 21111 222 222221 1123468899999976 35668887 6888888
Q ss_pred HHHhhhh-hcccCC--hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc----------
Q 041151 298 EIYKIAS-IALSPN--VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC---------- 364 (463)
Q Consensus 298 ~l~~~~~-~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~---------- 364 (463)
.+..... ..++.+ +..+.++...+. ... +.++++++++++.+++.+.|++. ++..
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~aa~~al~----------~~~-~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~ 295 (392)
T PLN03227 228 HQRLSGSGYCFSASAPPFLAKADATATA----------GEL-AGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVI 295 (392)
T ss_pred HHHHhCcCccccCCCCHHHHHHHHHHHH----------HHh-cCHHHHHHHHHHHHHHHHHHHhc-CCcccccccccccc
Confidence 7765432 233433 445555554442 111 23456778899999999999753 2221
Q ss_pred ccCCceeEEeeeccCChhhHHHHhhcCCCC--hHHHHHHHHHhcCeEeeCCCC-----CCCCCCCcEEEEEec--CCcCc
Q 041151 365 NFTEGAMYSFPQIRLPPKAIEAAKRAGKVP--DVFYCLRLLEATGISTVPGSG-----FGQKEGIFHLRTTIL--PAEED 435 (463)
Q Consensus 365 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gI~v~pg~~-----f~~~~~~~~lRis~~--~~~e~ 435 (463)
.....+.++.+.+.-... . . ...+ ....+.+.+.++||.+.+... +... ....+|+++. ++++|
T Consensus 296 ~~~~~~~i~~i~~~~~~~--~---~-~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~-P~~~iR~~~~~~~t~ee 368 (392)
T PLN03227 296 TSDPISPIIYLRLSDQEA--T---R-RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLV-PPPCLRVVANASHTRED 368 (392)
T ss_pred CCCCCCCEEEEEeCCHHH--h---h-hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCC-CCceEEEEecCCCCHHH
Confidence 111123333333321100 0 0 0000 012334556778999975221 1111 1247999999 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 041151 436 MPAIMESFKKFNDEFMEQYED 456 (463)
Q Consensus 436 i~~~~~~l~~~l~~~~~~~~~ 456 (463)
+++++++|+++++++.-+|-|
T Consensus 369 i~~~~~~l~~~~~~~~~~~~~ 389 (392)
T PLN03227 369 IDKLLTVLGEAVEAILCKIID 389 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999988655544
No 182
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=1.1e-20 Score=191.22 Aligned_cols=306 Identities=15% Similarity=0.115 Sum_probs=201.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccC------CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---c
Q 041151 82 PADAIARAKHYLSLTSGGLGAYS------DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---R 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~ 152 (463)
|+.+++++.+.+.....+..... .......+|+.++++++ +++++|++|+|+++++..++.++. .
T Consensus 16 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 89 (402)
T TIGR02006 16 DPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG------ADSREIVFTSGATESNNLAIKGIAHFYK 89 (402)
T ss_pred CHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence 88899998877654211111111 11234567788888875 678899999999999999887763 1
Q ss_pred CCCCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 153 GEGDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 153 ~~gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
++|++|+++ .|.++ ...++.+|+ +.+++.+++ ++++|++++++||||.+.+
T Consensus 90 ~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~-~~l~~~l~~------~~~lv~v~~~~n~tG~~~~-- 160 (402)
T TIGR02006 90 SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDL-EELKAAIRD------DTILVSIMHVNNEIGVIQD-- 160 (402)
T ss_pred CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCH-HHHHHhcCC------CCEEEEEECCCcCceeccc--
Confidence 589999986 25555 344566899 999999876 7899999999999999987
Q ss_pred HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 292 (463)
+++|.++|+++|+++++|++++.... +..+. +.+-.+++.|.+|.+ |++| +|++++ +
T Consensus 161 -~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~-----------~~~~D~~~~s~~K~~-gp~G--~G~l~~---~ 217 (402)
T TIGR02006 161 -IAAIGEICRERKVFFHVDAAQSVGKI-----PINVN-----------ELKVDLMSISGHKIY-GPKG--IGALYV---R 217 (402)
T ss_pred -HHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcc-----------ccCCCEEEEehhhhc-CCCc--eEEEEE---c
Confidence 67788888999999999999975322 11221 112347889999977 7667 888886 3
Q ss_pred hhHHHHHHhhh-------h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 041151 293 PKTVDEIYKIA-------S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC 364 (463)
Q Consensus 293 ~~~~~~l~~~~-------~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~ 364 (463)
++....+.... . ...+.+.....++..+++ ......+...+++++.++.+.+.|++++++.+
T Consensus 218 ~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~ 287 (402)
T TIGR02006 218 RKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFR----------IAKEEMAQDTAHVLALRDRLLNGIKSIEEVYL 287 (402)
T ss_pred cCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 32222221111 1 112334444444445542 12234566778889999999999998888766
Q ss_pred ccCCc---eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----------------CCcEE
Q 041151 365 NFTEG---AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----------------GIFHL 425 (463)
Q Consensus 365 ~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----------------~~~~l 425 (463)
..+.. ...+.+.+... +.... ...+ .+|.++.|..|.... ..+++
T Consensus 288 ~~~~~~~~p~~~~v~f~~~-------------~~~~~-~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~v 351 (402)
T TIGR02006 288 NGDLEHRVPGNLNVSFNYV-------------EGESL-IMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSI 351 (402)
T ss_pred eCCccccCCCeEEEEEeCc-------------CHHHH-HHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceE
Confidence 53211 00011112210 12222 2223 589988887764310 13689
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 426 RTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 426 Ris~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
|+|++ ++++|++++++.|+++++.++
T Consensus 352 R~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 352 RFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999 899999999999999988764
No 183
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.3e-20 Score=185.04 Aligned_cols=210 Identities=11% Similarity=0.144 Sum_probs=152.4
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------cCC
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------KRQ 169 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------~~~ 169 (463)
+..|+.+ ....|++++|++.+ .++|++|+|+++++..++.+++ ++||+|+++ ++... ...
T Consensus 47 Y~R~~np-t~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcC
Confidence 4555554 36789999999974 5899999999999999999998 899999997 33221 111
Q ss_pred Cc------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCC
Q 041151 170 QI------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDER 243 (463)
Q Consensus 170 ~~------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~ 243 (463)
++ ..|+ +.+++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|....+. .
T Consensus 117 gi~v~~vd~~d~-e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~--~ 184 (388)
T PRK08861 117 DFKVQFVDQSDA-AALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ--K 184 (388)
T ss_pred CeEEEEECCCCH-HHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC--C
Confidence 11 2477 999988876 8999999999999999999 556777888999999999999875441 1
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcC
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVN 322 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~ 322 (463)
+ .. + +. .+++.|++|+++|..++..|+++. .++++.++++..+. .+...+++....+..-|+
T Consensus 185 p-l~-------~----Ga---Divv~S~tK~l~G~~d~~gG~i~~--~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~ 247 (388)
T PRK08861 185 P-LE-------L----GA---DFVIHSTTKYINGHSDVIGGVLIT--KTKEHAEELAWWGNCIGATGTPFDSYMTLRGIR 247 (388)
T ss_pred C-cc-------c----CC---CEEEeecceeccCCCcceeEEEEe--cHHHHHHHHHHHHhccCCCCChHHHHHHHhcCC
Confidence 1 11 1 22 389999999996556788999984 35677777776655 345555665555544443
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 323 PLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
. +.-+.++..++...+.+.|+..|.+
T Consensus 248 T--------------l~lR~~~~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 248 T--------------LGARMRVHEESAQQILAYLQTQSLV 273 (388)
T ss_pred C--------------HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 2 2234455677788888888887654
No 184
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=1.2e-20 Score=193.64 Aligned_cols=277 Identities=16% Similarity=0.144 Sum_probs=181.8
Q ss_pred HHHHHHHHH---HHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee---
Q 041151 110 PGVRKEVAE---FIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW--- 166 (463)
Q Consensus 110 ~~lr~~ia~---~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~--- 166 (463)
+.+++++++ ++.+.+|. +.+++++|+|+++++..++.++...+|++|+++ .|.++
T Consensus 108 ~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v 185 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGM--DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV 185 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCC--CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe
Confidence 446666664 34666664 456899999999999999888732689999997 25555
Q ss_pred c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe--cccccccccCCCC
Q 041151 167 K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG--DEVYQQNIYQDER 243 (463)
Q Consensus 167 ~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~--Deay~~~~~~~~~ 243 (463)
+ ..+ .+|+ +.|++++++ ++++|++++| ||||.+.+ +++|.++|+++|+++++ |.+... .+
T Consensus 186 ~~~~~-~~d~-~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g-~~---- 248 (447)
T PRK00451 186 PYEDG-VTDL-EALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLG-LL---- 248 (447)
T ss_pred cCCCC-CCCH-HHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhc-cC----
Confidence 2 234 7899 999999976 8999999999 89999966 78888899999999988 433211 11
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEe---cCCcccCCCCCceeEEEEecCCChhHHHHHH--------------------
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFH---TVSKGYWGECGQRGGYFEMTNIPPKTVDEIY-------------------- 300 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~-------------------- 300 (463)
. .. .+.+..+++. +|||.+ +++|+++||+++ ++++++.+.
T Consensus 249 ~--~~-----------~~~~~D~~~~s~~k~~~~~-~~~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 311 (447)
T PRK00451 249 K--PP-----------GEYGADIVVGEGQPLGIPL-SFGGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTL 311 (447)
T ss_pred C--Cc-----------ccCCCCEEEECCCcCCCCC-CCCCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeec
Confidence 0 00 1111234544 678877 778999999984 777777631
Q ss_pred --------hhhh-hcccCChHHH-HHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCce
Q 041151 301 --------KIAS-IALSPNVPAQ-IFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGA 370 (463)
Q Consensus 301 --------~~~~-~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~ 370 (463)
+... ...+.+...| .++...++. ......+++++++.++++++.+.|++++|+.+. ++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~---------~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~ 380 (447)
T PRK00451 312 QAREQHIRREKATSNICTNQALNALAAAIYMSL---------LGPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGP 380 (447)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHH---------HCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCC
Confidence 1111 1122222233 222222210 001235667889999999999999998788775 455
Q ss_pred eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEe-eCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 371 MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGIST-VPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v-~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
+|.++.++++. +..+++.. |.++||.+ .+++.|+.. ...++|+|+. .++++++++++.|++++
T Consensus 381 ~~~~~~v~~~~------------~~~~~~~~-L~~~gi~~~~~~~~~~~~-~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 381 FFNEFVVRLPK------------PAEEVNEA-LLEKGILGGYDLGRYYPE-LGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred eEEEEEEecCC------------CHHHHHHH-HHhcCCCCCcccccccCC-cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 55543233321 24455555 45567653 455656532 2358999997 78899999999998764
No 185
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=2.1e-20 Score=187.59 Aligned_cols=200 Identities=13% Similarity=0.124 Sum_probs=142.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~-~~~~ 170 (463)
...|++.++++++ .+++++++|+++++..++.+++ ++||+|+++ .|+++ ..+.
T Consensus 63 ~~~le~~la~l~g--------~~~~v~~ssG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEG--------AEACVATASGMAAILAVVMALL-QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 5678888888864 4578899999999999999998 899999996 23333 1111
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
-|. +.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|....+. . ++ .
T Consensus 134 --~d~-~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~--~---pl-~ 195 (390)
T PRK08133 134 --TDL-DAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ--Q---PL-K 195 (390)
T ss_pred --CCH-HHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC--C---ch-h
Confidence 267 899998876 8999999999999999987 678888899999999999999764331 1 11 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCc
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
. . ..+++.|+||++ +.+|.++|++++ +++++++.+..... .....+...+..+..-+
T Consensus 196 ~--------g---~Divv~S~sK~~-~g~g~~~GG~vv--~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl-------- 253 (390)
T PRK08133 196 L--------G---ADVVIHSATKYL-DGQGRVLGGAVV--GSKELMEEVFGFLRTAGPTLSPFNAWVFLKGL-------- 253 (390)
T ss_pred h--------C---CcEEEeecceee-cCCcceEeEEEE--cCHHHHHHHHHHHHHhCCCCCHHHHHHHHccc--------
Confidence 1 2 237899999999 788999855444 67777777765544 33334444433332222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
+.+..+.+++.+++..+.+.|++.|++.
T Consensus 254 ------~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 254 ------ETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 2233345566778888999998877654
No 186
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=1.9e-20 Score=187.87 Aligned_cols=298 Identities=10% Similarity=0.073 Sum_probs=198.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcCCcHHHHHHHHHHHhc-CCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQTLNCVIR-GEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 159 (463)
++++++++.+++... ..++. .-..++++++++.+.. .++ .+++++++++++..+++.... .+++.|+
T Consensus 46 ~p~v~~a~~~~~~~~----~~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv 114 (375)
T PRK04260 46 HPQVQQALQKQAGLI----WHSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANEAAIKIARKATGKQEII 114 (375)
T ss_pred CHHHHHHHHHHHHhc----CcccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEE
Confidence 567999998888752 12332 2346788999988752 233 468899999999988887621 2345565
Q ss_pred Ec----cCcee-------------------cCCCc--ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC-HHH
Q 041151 160 LL----FHTTW-------------------KRQQI--GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS-EAN 213 (463)
Q Consensus 160 vp----~g~~~-------------------~~~~~--~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s-~~~ 213 (463)
+. +|... ....+ -.|+ +.+++.+.+ ++.+|+++.++|++|.+.+ .+.
T Consensus 115 ~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl-~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~ 187 (375)
T PRK04260 115 TFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDL-NSVKALVNK------NTAAVMLELVQGESGVLPADKDF 187 (375)
T ss_pred EECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCH-HHHHHhcCC------CeEEEEECCeECCCCCcCCCHHH
Confidence 53 22111 00001 1377 889888765 6888888899999998754 567
Q ss_pred HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh
Q 041151 214 LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP 293 (463)
Q Consensus 214 l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~ 293 (463)
+++|.++|+++|+++|+||+|..+.. .+. ..+... .++ ..+ +.||||++ + +|+|+||++ +++
T Consensus 188 l~~~~~l~~~~~~~~i~De~~~g~g~-~g~-~~~~~~--~~~----~pd-----i~t~sK~l-~-~G~~ig~~~---~~~ 249 (375)
T PRK04260 188 VKALADYCQETGILLIVDEVQTGMGR-TGK-LYAFEH--YGI----EPD-----IFTLAKGL-A-NGVPVGAML---AKS 249 (375)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCc-ccc-hhhhHh--hCC----CCC-----EEEecccc-c-CCcceEEEE---EcH
Confidence 99999999999999999999987533 111 111111 111 222 34899999 5 799999999 588
Q ss_pred hHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeE
Q 041151 294 KTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMY 372 (463)
Q Consensus 294 ~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~ 372 (463)
++.+.+..... .+++.+++.+.++.++|+... .....++.++..+..++.+.+.+.+.+.+..+. ..|++
T Consensus 250 ~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~ 320 (375)
T PRK04260 250 SLGGAFGYGSHGSTFGGNKLSMAAASATLDIML--------TAGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYM 320 (375)
T ss_pred HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH--------hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceE
Confidence 88888765433 467788999999988874211 112234455566666666766666653333333 37888
Q ss_pred EeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 373 SFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
+|+.+. . +...+ .+.+.++||.+.|. +...+|+++. .+++++++++++|+++
T Consensus 321 ~~~~~~--~------------~~~~~-~~~l~~~Gi~v~~~-------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 321 IGIETT--A------------DLSQL-VEAARDKGLIVLTA-------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEec--C------------cHHHH-HHHHHhCCCEEecC-------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 886552 1 12343 45567789999874 2247999996 7899999999999765
No 187
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=4.5e-20 Score=185.59 Aligned_cols=208 Identities=14% Similarity=0.159 Sum_probs=142.9
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC-------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH------------- 163 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g------------- 163 (463)
...|+.+. ...|++++|++++ . +..+++++++.++..++.+++ ++||+|+++ ++
T Consensus 59 y~r~~~p~-~~~Le~~lA~l~G------~--~~~~~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 59 YSRYSNPT-VDMFEKRMCALEG------A--EDARATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred eecCCCch-HHHHHHHHHHHhC------C--CeeeEecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 34555443 5799999999875 2 223456677888988888887 899999997 33
Q ss_pred -cee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 164 -TTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 164 -~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
+++ .. ...|+ +.+++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|+...+ .
T Consensus 129 G~~v~~v--d~~d~-e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~-~ 195 (398)
T PRK07504 129 GIESTLV--DGLDL-DNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLF-Q 195 (398)
T ss_pred CeEEEEE--CCCCH-HHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcccccc-C
Confidence 222 11 13788 999999886 8999999999999999998 67777788899999999999986544 1
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHH-HHHhhhh-hcccCChHHHHHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVD-EIYKIAS-IALSPNVPAQIFMGL 319 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~~~~~ 319 (463)
.++ .+ + ..+++.|+||++ +.+|+++|++++ ++++.+. .++.... .....+.+....+..
T Consensus 196 ----~~~-~~--------g---aDivv~S~sK~l-~g~g~~~GG~vv--~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~ 256 (398)
T PRK07504 196 ----KPL-EL--------G---AHIVVYSATKHI-DGQGRCLGGVVL--SDKAWIEEHLQDYFRHTGPSLSPFNAWTLLK 256 (398)
T ss_pred ----Cch-hh--------C---CCEEEeeccccc-cCCccceEEEEE--eCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 111 11 1 247899999999 789999975554 5666654 3444333 333344444444443
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 320 MVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.|+ .+..+.++..++...+.+.|++.|++.
T Consensus 257 ~L~--------------tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 257 GLE--------------TLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred ccc--------------hHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 332 223345555677888888888876654
No 188
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.3e-20 Score=186.32 Aligned_cols=201 Identities=11% Similarity=0.102 Sum_probs=145.2
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------CceecCCC
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTWKRQQ 170 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~~~~~ 170 (463)
-...|++.+|++.+ .+..++++++++++..++.+++ ++||+|+++ + |+++. ..
T Consensus 65 ~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all-~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~-~v 134 (398)
T PRK08249 65 TVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFL-KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVT-LC 134 (398)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEE-Ec
Confidence 35788999999875 3456667777899999999998 899999997 2 33331 11
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
...|+ +.+++++++ ++++|++++|+||||.+++ +++|+++|++++++||+|++|+.... . . ++ .
T Consensus 135 d~~d~-e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~-~-~---~l-~ 198 (398)
T PRK08249 135 ETGDH-EQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPIN-Q-N---PL-A 198 (398)
T ss_pred CCCCH-HHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCcccc-C-C---ch-h
Confidence 23578 999999887 8999999999999999998 66688888999999999999986533 1 1 11 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCC
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
. .. .++++|+||.+ +.+|.++ ||++ +++++++++...+. .....+.+.+..+...++
T Consensus 199 ~--------~~---Divv~S~sK~l-~g~~~~~gG~vv---~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~------ 257 (398)
T PRK08249 199 L--------GA---DLVIHSATKFL-SGHADALGGVVC---GSKELMEQVYHYREINGATMDPMSAYLILRGMK------ 257 (398)
T ss_pred h--------CC---CEEeccCceec-CCCCCceEEEEE---CCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc------
Confidence 1 11 27889999999 6677776 5555 68889998887765 444556666655554442
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+....++..+++..+.+.|++.|.+.
T Consensus 258 --------tL~~R~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 258 --------TLKLRVRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 222344556778888888888766543
No 189
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=3.7e-20 Score=185.71 Aligned_cols=308 Identities=12% Similarity=0.010 Sum_probs=199.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCC----HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGI----PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI------ 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~------ 151 (463)
.+.+++++.+++..++....+-....|+ .+|.+++|+|++ .+..++.+++..|...++.+++
T Consensus 118 ~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--------~e~all~sSGy~AN~~~i~aL~~~~~~~ 189 (476)
T PLN02955 118 HPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--------KEDCLVCPTGFAANMAAMVAIGSVASLL 189 (476)
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--------CCcEEEECChHHHHHHHHHHHhhccccc
Confidence 7889999999998864322222223344 678888888874 5667777777888888888772
Q ss_pred -------cCCCCEEEEc--------cCceec-------CCCccc-ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 152 -------RGEGDGVVLL--------FHTTWK-------RQQIGV-LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 152 -------~~~gd~Vlvp--------~g~~~~-------~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
.++++.|+.+ .|++.. ...+.. |+ +.|++.++.... +.++|++..-.++.|.+
T Consensus 190 ~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~-~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdi 265 (476)
T PLN02955 190 AASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDM-YHLNSLLSSCKM---KRKVVVTDSLFSMDGDF 265 (476)
T ss_pred cccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCH-HHHHHHHHhCCC---CceEEEEeCCCCCCCCc
Confidence 1456677776 233221 011223 66 999999976311 34555555669999999
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
.+ +.+|.++|++||+++|+||+|+.+.++ .... .. ...+|+ . .+..|+++||||+| | .+.|+++
T Consensus 266 ap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G-~~G~-G~---~e~~g~--~-~di~ii~~TLsKA~-G---~~GGfi~- 329 (476)
T PLN02955 266 AP---MEELSQLRKKYGFLLVIDDAHGTFVCG-ENGG-GV---AEEFNC--E-ADVDLCVGTLSKAA-G---CHGGFIA- 329 (476)
T ss_pred CC---HHHHHHHHHHcCcEEEEcccccCceec-CCCC-cH---HHHhCC--C-CCCcEEEEeCccch-h---ccCceee-
Confidence 88 666777778999999999999988873 2211 11 222322 1 23679999999998 4 4559988
Q ss_pred cCCChhHHHHHHhhhh-h-cccCChHHHHHH-HHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 041151 289 TNIPPKTVDEIYKIAS-I-ALSPNVPAQIFM-GLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCN 365 (463)
Q Consensus 289 ~~~~~~~~~~l~~~~~-~-~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~ 365 (463)
+++++++.+..... . ..+..++...++ .+.+ + .......++++++++.+++.+.+ |+.+
T Consensus 330 --gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal----------~-l~~~~~~~r~~L~~n~~~fr~~~----G~~~- 391 (476)
T PLN02955 330 --CSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAV----------V-VARKEKWRRKAIWERVKEFKALS----GVDI- 391 (476)
T ss_pred --cHHHHHHHHHHhCCCCeecccccHHHHHHHHHHH----------H-HHhcCHHHHHHHHHHHHHHHHhc----CCCC-
Confidence 68889998887654 2 222233333222 2222 1 22222346778888888888742 5543
Q ss_pred cCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHH
Q 041151 366 FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESF 443 (463)
Q Consensus 366 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l 443 (463)
... ++.+.+.-+. ....+.+.|.++||.+.+......+.+...+||++. ++++||+++++.|
T Consensus 392 --~sP-I~pI~ig~~~-------------~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L 455 (476)
T PLN02955 392 --SSP-IISLVVGNQE-------------KALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITAL 455 (476)
T ss_pred --CCC-EEEEEeCCHH-------------HHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHH
Confidence 122 2222233221 233345667788999998777777777778999998 8999999999999
Q ss_pred HHHHHHHH
Q 041151 444 KKFNDEFM 451 (463)
Q Consensus 444 ~~~l~~~~ 451 (463)
+++.....
T Consensus 456 ~~~~~~~~ 463 (476)
T PLN02955 456 SSCLDFDN 463 (476)
T ss_pred HHHHhhhc
Confidence 98866543
No 190
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=2.2e-21 Score=193.04 Aligned_cols=293 Identities=16% Similarity=0.120 Sum_probs=191.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCC------CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDS------RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--- 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--- 152 (463)
|+.+++++.+.+............. .-..++|+.++++++ +++++|++|+|+++++..++.++..
T Consensus 11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 84 (353)
T TIGR03235 11 DPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG------ADTEEVIFTSGATESNNLAILGLARAGE 84 (353)
T ss_pred CHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 8899999988775421111111111 113577888888876 6788999999999999999988751
Q ss_pred CCC-CEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCH
Q 041151 153 GEG-DGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSE 211 (463)
Q Consensus 153 ~~g-d~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~ 211 (463)
.+| +.|+++ .|.++ ...++.+|+ +.+++.+++ ++++|++++++||||.+++
T Consensus 85 ~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~-~~l~~~l~~------~~~lv~~~~~~n~tG~~~~- 156 (353)
T TIGR03235 85 QKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDV-DELADAIRP------DTLLVSIMHVNNETGSIQP- 156 (353)
T ss_pred cCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCH-HHHHHhCCC------CCEEEEEEcccCCceeccC-
Confidence 245 677774 45555 234567899 999999876 7899999999999999988
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
+++|.++|+++|+++++|++++.... ..++ .+.+..+++.|.+|++ |++| +|++++
T Consensus 157 --~~~I~~l~~~~~~~~ivD~a~~~g~~-----~~~~-----------~~~~~D~~~~s~~K~~-gp~g--~g~l~~--- 212 (353)
T TIGR03235 157 --IREIAEVLEAHEAFFHVDAAQVVGKI-----TVDL-----------SADRIDLISCSGHKIY-GPKG--IGALVI--- 212 (353)
T ss_pred --HHHHHHHHHHcCCEEEEEchhhcCCc-----cccc-----------cccCCCEEEeehhhcC-CCCc--eEEEEE---
Confidence 67788888999999999999885322 1122 1122347778999987 8777 899986
Q ss_pred ChhHHHH--HHhh-------hh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 041151 292 PPKTVDE--IYKI-------AS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRN 361 (463)
Q Consensus 292 ~~~~~~~--l~~~-------~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg 361 (463)
+++.... +... .. ...+.+.....++.++++ ......+.++++++++++++.+.|++ +|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~-~g 281 (353)
T TIGR03235 213 RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE----------IARRNAQAWEVKLRAMRNQLRDALQT-LG 281 (353)
T ss_pred ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHhcc-CC
Confidence 4443221 1110 00 123344444455555542 12234566788999999999999988 58
Q ss_pred cccccCCc-eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC-CCcEEEEEecCCcCcH
Q 041151 362 VVCNFTEG-AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE-GIFHLRTTILPAEEDM 436 (463)
Q Consensus 362 ~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~-~~~~lRis~~~~~e~i 436 (463)
+++..+.. ....++.+.++.. +.+.+...|++ +|.|.+|..|+... +..++|.+++.+++++
T Consensus 282 ~~~~~~~~~~~~~i~~~~~~~~------------~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~ 345 (353)
T TIGR03235 282 VKLNGDPAETIPHILNFSIDGV------------NSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRA 345 (353)
T ss_pred eEEeCCcccccCCEEEEEeCCc------------CHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHh
Confidence 88764332 2222222333321 23345566665 99999999997532 2336788887554443
No 191
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.87 E-value=1.8e-20 Score=180.79 Aligned_cols=313 Identities=18% Similarity=0.205 Sum_probs=220.9
Q ss_pred cHHHHHHHHHHhhhcCC---CCCccCC--CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHH--Hhc--
Q 041151 82 PADAIARAKHYLSLTSG---GLGAYSD--SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNC--VIR-- 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~---~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~--l~~-- 152 (463)
.+.+++++...+....+ ..+.|+. ..-..+.|+.||+.++ +++++|++|+|++|+.++++.. ...
T Consensus 14 ~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~ 87 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPEEIIFTSGATESNNLAIKGAALAYRN 87 (386)
T ss_pred CHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCCeEEEecCCcHHHHHHHHhhHHhhhc
Confidence 78999999887776421 3445542 2234578888888887 7889999999999999999998 331
Q ss_pred -CCCCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCH
Q 041151 153 -GEGDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSE 211 (463)
Q Consensus 153 -~~gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~ 211 (463)
+.|.+|+++ .|..+ +..+..+|+ +.|+++|++ ++.+|-+...||-||.+.+
T Consensus 88 ~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~-e~L~~al~~------~T~LVSim~aNnE~G~IQp- 159 (386)
T COG1104 88 AQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDL-EQLEEALRP------DTILVSIMHANNETGTIQP- 159 (386)
T ss_pred ccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcH-HHHHHhcCC------CceEEEEEecccCeeeccc-
Confidence 257788886 36565 556788999 999999998 8999999999999999988
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
+++|.++|+++++++.+|.+.+.. +-+..+..+ +-.+...|-+|.. |+.| +|.+++ .
T Consensus 160 --I~ei~~i~k~~~i~fHvDAvQa~G-----kipi~~~~~-----------~vD~ls~SaHK~~-GpkG--iGaLyv--~ 216 (386)
T COG1104 160 --IAEIGEICKERGILFHVDAVQAVG-----KIPIDLEEL-----------GVDLLSFSAHKFG-GPKG--IGALYV--R 216 (386)
T ss_pred --HHHHHHHHHHcCCeEEEehhhhcC-----ceecccccc-----------CcceEEeehhhcc-CCCc--eEEEEE--C
Confidence 777888999999999999999853 222333221 1235667788966 8888 899986 2
Q ss_pred ChhHHHHHH----hhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCcccc
Q 041151 292 PPKTVDEIY----KIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-RNVVCN 365 (463)
Q Consensus 292 ~~~~~~~l~----~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-pg~~~~ 365 (463)
+.-....+. ..+. ...+.+.+.-.++..+++ .-..+++....++.+.++.|.+.|.+. |++.+.
T Consensus 217 ~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~----------~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~ 286 (386)
T COG1104 217 PGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAE----------IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLN 286 (386)
T ss_pred CCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEc
Confidence 222222221 1112 233444555555555543 234456667778889999999999875 777766
Q ss_pred cCC---ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----------------CCcEEE
Q 041151 366 FTE---GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----------------GIFHLR 426 (463)
Q Consensus 366 ~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----------------~~~~lR 426 (463)
... -...+. +.+|.- ..+.+...|..+||.+..|+.|.... ..+.+|
T Consensus 287 g~~~~rlP~~~~--~~f~gv------------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR 352 (386)
T COG1104 287 GDDEPRLPNILN--FSFPGV------------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIR 352 (386)
T ss_pred CCcccCCCCeEE--EEeCCC------------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEE
Confidence 432 122222 233321 34445667888999999999996531 135899
Q ss_pred EEec--CCcCcHHHHHHHHHHHHHHHHHHhc
Q 041151 427 TTIL--PAEEDMPAIMESFKKFNDEFMEQYE 455 (463)
Q Consensus 427 is~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 455 (463)
+|++ ++++|++.+++.|+++++++++...
T Consensus 353 ~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~ 383 (386)
T COG1104 353 FSLGRFTTEEEIDAAAEALKEIIKRLRELSP 383 (386)
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999 8999999999999999999887543
No 192
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=2.9e-20 Score=186.52 Aligned_cols=207 Identities=11% Similarity=0.136 Sum_probs=143.9
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F-------------- 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~-------------- 162 (463)
+..|+.+. ...|++.+|++++ .+..+++++++.++..++.+++ ++||+|+++ +
T Consensus 53 y~r~~~p~-~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 53 YSRLGNPT-VSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTIL-KAGDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred eeCCCCch-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCcchHHHHHHHHHHhcC
Confidence 34455443 5689999999985 2446777777889999999998 899999997 2
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ ..+. -|+ +.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 123 G~~~~~vd~--~d~-e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~- 189 (391)
T TIGR01328 123 GIQVDFINM--AIP-EEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT- 189 (391)
T ss_pred CeEEEEECC--CCH-HHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC-
Confidence 2333 1111 167 889998876 8999999999999999987 667778888999999999999864331
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhhh--h-cccCChHHHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIAS--I-ALSPNVPAQIFM 317 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~--~-~~~~~~~~q~~~ 317 (463)
. ++ . . . ..|++.|+||.+ +.+|.++ |+++ +++++++.++.... . +...+......+
T Consensus 190 -~---~~-~----~----g---~Divv~S~sK~l-gg~g~~~gG~v~---~~~~li~~l~~~~~~~~~g~~l~~~~a~l~ 249 (391)
T TIGR01328 190 -N---PV-A----L----G---VDVVVHSATKYI-GGHGDVVAGLIC---GKAELLQQIRMVGIKDMTGSVISPFDAWLI 249 (391)
T ss_pred -C---ch-h----c----C---CCEEEccccccc-cCCCCceEEEEE---cCHHHHHHHHHHHHHhCCCCCCCcHHHHHH
Confidence 1 11 1 1 1 237889999999 7788775 6665 68898888876432 1 223333333333
Q ss_pred HHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 318 GLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
...|+ .+..+.++..++...+.+.|++.|++.
T Consensus 250 l~~L~--------------tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 250 LRGLK--------------TLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HhCcC--------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33332 222345566778888888888877654
No 193
>PRK14012 cysteine desulfurase; Provisional
Probab=99.87 E-value=3.9e-20 Score=187.39 Aligned_cols=304 Identities=15% Similarity=0.138 Sum_probs=195.2
Q ss_pred cHHHHHHHHHHhh--hcCCCCCccCC------CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--
Q 041151 82 PADAIARAKHYLS--LTSGGLGAYSD------SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI-- 151 (463)
Q Consensus 82 p~~~~~a~~~~~~--~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 151 (463)
|+.+++++.+.+. ....+...... .....++|+.++++++ .++++|++++|+++++..++.++.
T Consensus 16 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~~v~~~~g~t~al~~~l~~l~~~ 89 (404)
T PRK14012 16 DPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG------ADPREIVFTSGATESDNLAIKGAAHF 89 (404)
T ss_pred CHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcCeEEEeCCHHHHHHHHHHHHHHh
Confidence 8889999888765 21111111111 1234567788888775 667899999999999999887763
Q ss_pred -cCCCCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 152 -RGEGDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 152 -~~~gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
.++||+|+++ .|.++ .+.++.+|+ +.|++++++ ++++|++++++||||.+.+
T Consensus 90 ~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~-~~l~~~i~~------~t~lv~~~~~~n~tG~~~~ 162 (404)
T PRK14012 90 YQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDL-EKLEAAMRD------DTILVSIMHVNNEIGVIQD 162 (404)
T ss_pred hcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCH-HHHHHhcCC------CCEEEEEECcCCCccchhh
Confidence 2689999996 26655 334566899 999999987 7999999999999999987
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
+++|.++|++++++||+|++++.... +..+... + ..+++.|++|.+ |.+ ++|++++
T Consensus 163 ---~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~--------~---~D~~~~s~~K~~-gp~--g~G~l~~-- 218 (404)
T PRK14012 163 ---IAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKL--------K---VDLMSFSAHKIY-GPK--GIGALYV-- 218 (404)
T ss_pred ---HHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccC--------C---CCEEEEehhhcc-CCC--ceEEEEE--
Confidence 67788888999999999999975322 1122111 1 236778999977 644 4899886
Q ss_pred CChhHHHHHHhh-hh------hccc-CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 291 IPPKTVDEIYKI-AS------IALS-PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 291 ~~~~~~~~l~~~-~~------~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+++....+... .. ...+ .+......+.+++. ....+.....++.++.++++.+.|++++++
T Consensus 219 -~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i 287 (404)
T PRK14012 219 -RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAAR----------IAKEEMATENERIRALRDRLWNGIKDIEEV 287 (404)
T ss_pred -ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 33322222211 00 0111 22222222323321 112234456677888888899999888777
Q ss_pred ccccC-----CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----------------C
Q 041151 363 VCNFT-----EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----------------G 421 (463)
Q Consensus 363 ~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----------------~ 421 (463)
.+..+ ...++++ +..+. ...+ ...| .++.|..|..|.... .
T Consensus 288 ~~~~~~~~~~~~~~~~~--~~~~~-------------~~~~-~~~l--~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (404)
T PRK14012 288 YLNGDLEQRVPGNLNVS--FNYVE-------------GESL-IMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDELA 349 (404)
T ss_pred EEeCCccccCCCEEEEE--EeCcC-------------HHHH-HHhC--CCeEEEchhhhCCCCCCCCHHHHHcCCChhhc
Confidence 65422 1223344 33221 1222 2333 377787776653310 1
Q ss_pred CcEEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 422 IFHLRTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 422 ~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.+.+|+++. ++++|++++++.|++++++++
T Consensus 350 ~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 350 HSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999 899999999999999988763
No 194
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=2.5e-19 Score=180.24 Aligned_cols=202 Identities=14% Similarity=0.124 Sum_probs=144.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCc--------------eecCCCc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHT--------------TWKRQQI 171 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~--------------~~~~~~~ 171 (463)
...|++.+|++.+ ..+++++++| ++++..++.+++ +|||+|+++ ++. ++. ...
T Consensus 62 ~~~Le~~lA~l~g-------~~~~v~~~sG-~~Ai~~~l~all-~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~-~v~ 131 (405)
T PRK08776 62 RDLLGEALAELEG-------GAGGVITATG-MGAINLVLNALL-QPGDTLVVPHDAYGGSWRLFNALAKKGHFALI-TAD 131 (405)
T ss_pred HHHHHHHHHHHhC-------CCceEEEcCH-HHHHHHHHHHHh-CCCCEEEEccCCchHHHHHHHHHHHhcCcEEE-EEC
Confidence 3567777777653 2345555555 799999999998 899999997 332 220 011
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
..|+ +.|++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|..... ..++ .
T Consensus 132 ~~d~-~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~-----~~pl-~- 194 (405)
T PRK08776 132 LTDP-RSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL-----QKPL-E- 194 (405)
T ss_pred CCCH-HHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc-----CCcc-c-
Confidence 2477 999988876 7999999999999999865 78888899999999999999975321 1122 1
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCch
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDIS 330 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~ 330 (463)
+ .. .+++.|.||+++|..++..|++++ .++++.+++..... .....+++.+.++...+
T Consensus 195 ---~----ga---Divv~S~tK~l~g~~~~~~G~vv~--~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl--------- 253 (405)
T PRK08776 195 ---F----GA---DLVLHSTTKYINGHSDVVGGAVVA--RDAELHQQLVWWANALGLTGSPFDAFLTLRGL--------- 253 (405)
T ss_pred ---c----cC---CEEEecCceeecCCCCceEEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---------
Confidence 1 22 288999999994445688999875 56788888876554 34556666666655443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 331 YEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
++++.+.++..+++..+.+.|++.|.+.
T Consensus 254 -----~tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 254 -----RTLDARLRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 3344567778888999999998876553
No 195
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.87 E-value=1e-19 Score=183.66 Aligned_cols=303 Identities=14% Similarity=0.128 Sum_probs=192.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+.......|+ .+...++++.+.+. ...+.+++++++++|+..+++.... .+|
T Consensus 53 ~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~la~~L~~~----~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~ 123 (397)
T TIGR03246 53 HPELVKALIEQADKLWHIGNGYT-----NEPVLRLAKKLVDA----TFADKVFFCNSGAEANEAALKLARRYALDKHGAD 123 (397)
T ss_pred CHHHHHHHHHHHHhcccccCccC-----CHHHHHHHHHHHhh----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 78899999888876211111121 23344455555433 2246999999999999999997620 123
Q ss_pred -CEEEE-c---cCcee-----cC-----CC----------c-ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 156 -DGVVL-L---FHTTW-----KR-----QQ----------I-GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 156 -d~Vlv-p---~g~~~-----~~-----~~----------~-~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
..|+. . +|... .. .. + -.|+ +.+++.+.+ ++++|+++.++++.|...
T Consensus 124 r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~aavi~Epi~~~~G~~~ 196 (397)
T TIGR03246 124 KSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDL-AAAKALISD------KTCAVIVEPIQGEGGVVP 196 (397)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCH-HHHHHHhcc------CeEEEEEecccCCCCCcC
Confidence 34444 3 33221 00 00 0 1377 999998875 788888885555556443
Q ss_pred -CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 210 -SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 210 -s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+.+.+++|.++|++||+++|+||+|..+... +.. ... ..+++ . .-+.++||.+ + .|+++||++
T Consensus 197 ~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~-G~~-~a~----~~~gv--~-----pDi~t~~K~l-g-gG~pigav~- 260 (397)
T TIGR03246 197 ADPAFLKGLRELCDRHNALLIFDEVQTGVGRT-GEL-YAY----MHYGV--T-----PDILTSAKAL-G-GGFPIGAML- 260 (397)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhcCCcc-ccc-hhh----hhcCC--C-----CCEEEeehhh-h-CCcceeEEE-
Confidence 8899999999999999999999999765331 111 111 11111 1 1234899999 6 799999999
Q ss_pred cCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---C-cc
Q 041151 289 TNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR---N-VV 363 (463)
Q Consensus 289 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p---g-~~ 363 (463)
+++++++.+..... .+++.+++.+.++.+.|+ ... .+++.++++++.+++.+.|+++. + +.
T Consensus 261 --~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~-----------~~~-~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~ 326 (397)
T TIGR03246 261 --TTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLD-----------LVN-TPELLAGVKQRHDLFVDGLEKINARYNVFS 326 (397)
T ss_pred --EcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 58888888865432 456678888888877764 222 23567788888889998887751 1 22
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
...+.|.++.+ .+..+.. .....++ ..|.++||.+.+. + .+++|++++ .++++++++++
T Consensus 327 ~vrg~G~~~~i-~~~~~~~----------~~~~~~~-~~l~~~Gv~~~~~---g----~~~lR~~p~~~~t~~~i~~~~~ 387 (397)
T TIGR03246 327 EIRGKGLLIGA-VLTEAYQ----------GKAKQFV-NAAAEEGVIALIA---G----PNVVRFAPSLVISDDDIDEGLA 387 (397)
T ss_pred eeecCceEEEE-EEcCchh----------hHHHHHH-HHHHHCCeEEeec---C----CCEEEEeCCCCCCHHHHHHHHH
Confidence 23334443332 2211100 0133444 4566789998762 2 247999666 89999999999
Q ss_pred HHHHHHHH
Q 041151 442 SFKKFNDE 449 (463)
Q Consensus 442 ~l~~~l~~ 449 (463)
+|.+++.+
T Consensus 388 ~l~~~l~~ 395 (397)
T TIGR03246 388 RFERAIEQ 395 (397)
T ss_pred HHHHHHHH
Confidence 99998865
No 196
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.86 E-value=2.2e-19 Score=180.11 Aligned_cols=271 Identities=10% Similarity=0.063 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----CCCCEEEEc-------------cCcee----c
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----GEGDGVVLL-------------FHTTW----K 167 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~gd~Vlvp-------------~g~~~----~ 167 (463)
.++++.+|++++ ++++++++++|+++++..++.++.. ++||+|+++ .|+++ .
T Consensus 62 ~~~~~~la~~~g------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~ 135 (373)
T TIGR03812 62 EEVVGSLGNLLH------LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPL 135 (373)
T ss_pred HHHHHHHHHHhC------CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEee
Confidence 455566666654 5667889999999999888776531 367899997 56665 3
Q ss_pred CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC-C----C
Q 041151 168 RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ-D----E 242 (463)
Q Consensus 168 ~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~-~----~ 242 (463)
..++.+|+ +.+++.+.+ ++..++++.|+||||.+.+ +++|.++|+++++++++|++|..+... . .
T Consensus 136 ~~~~~~d~-~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 136 DEDYTVDV-KDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred CCCCCcCH-HHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 44677899 999999987 5655666668999999977 667778888999999999999864320 0 0
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh-c--------ccCChHH
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI-A--------LSPNVPA 313 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~--------~~~~~~~ 313 (463)
.....+ ...+-..+..|.+| + +.++.++|++++ .++++++.+...... . .+.+...
T Consensus 206 ~~~~d~-----------~~~~~d~~~~s~~K-~-~~~~~~~G~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~ 270 (373)
T TIGR03812 206 PPPFDF-----------SLPGVQSITIDPHK-M-GLSPIPAGGILF--RSKSYLKYLSVDAPYLTVKKQATITGTRSGAS 270 (373)
T ss_pred CCCccc-----------cCCCCCEEEECccc-c-CCCcCCceEEEE--eCHHHHhhhcccCcccCCCCCcceEeechhHH
Confidence 000111 00011134567889 5 567888887765 577887776422221 1 1122334
Q ss_pred HHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 314 QIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 314 q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
..++..+++ .. ....++..++..++++++.+.|+++ |+. +..+..++. .+ ..+.
T Consensus 271 ~~~~~~~l~----------~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v-~~--~~~~---------- 326 (373)
T TIGR03812 271 AAATYAVIK----------YLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIV-AF--EVDD---------- 326 (373)
T ss_pred HHHHHHHHH----------HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEE-EE--EeCC----------
Confidence 444444442 11 1224567788999999999999988 543 444544433 32 3331
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHH
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKK 445 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~ 445 (463)
..+ +.+.|.++||.+.++. ...++|+++. .+++|+++++++|++
T Consensus 327 ---~~~-v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 327 ---PEE-VRKKLRDRGWYVSVTR------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ---HHH-HHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 223 4455677899997753 2248999998 788999999999875
No 197
>PLN00144 acetylornithine transaminase
Probab=99.86 E-value=5.7e-20 Score=184.12 Aligned_cols=305 Identities=11% Similarity=0.060 Sum_probs=190.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--C------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--G------ 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~------ 153 (463)
++.+.+++.+.+.... .++. ....+...++|+.+.+. ...+.|++++++++++..+++.... .
T Consensus 33 ~p~v~~ai~~q~~~~~----~~~~-~~~~~~~~~la~~l~~~----~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~ 103 (382)
T PLN00144 33 DPDWVKAVAEQAGTLA----HVSN-VYHTIPQVELAKRLVAS----SFADRVFFCNSGTEANEAAIKFARKYQRVRAPDK 103 (382)
T ss_pred CHHHHHHHHHHHHhcC----Cccc-cccCHHHHHHHHHHHhc----CCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCC
Confidence 6789999988887621 1111 11234455666666543 2346899999999999999986531 1
Q ss_pred C------CCEEEEc----cCcee----------cCCCcc-----------cChHHHHHHHHHHHHhcCCceeEEEEECCC
Q 041151 154 E------GDGVVLL----FHTTW----------KRQQIG-----------VLIINDLQQSVAQARSKGITVRAMVIINPG 202 (463)
Q Consensus 154 ~------gd~Vlvp----~g~~~----------~~~~~~-----------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~ 202 (463)
+ ..+|+.- +|... ....+. .|+ +.|++.+... ++++|++.--+
T Consensus 104 ~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~~~~~-----~~aavi~eP~q 177 (382)
T PLN00144 104 KDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNL-EAARKLIQKG-----KTAAVFVEPVQ 177 (382)
T ss_pred ccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCH-HHHHHhcCCC-----CeEEEEEcccc
Confidence 0 1345553 33221 000111 167 8888887532 68888877448
Q ss_pred CCCccCCCHHH--HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC
Q 041151 203 NPTGQCLSEAN--LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG 280 (463)
Q Consensus 203 NPtG~~~s~~~--l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G 280 (463)
|| |.+++.+. +++|.++|++||+++|+||+|..+... +... . ..+ .++ ..+ +.||||++ + +|
T Consensus 178 ~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~-g~~~-~-~~~-~~~----~PD-----i~t~sK~l-~-~G 241 (382)
T PLN00144 178 GE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRT-GYLW-A-HEA-YGV----EPD-----IMTLAKPL-A-GG 241 (382)
T ss_pred CC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-chHh-h-hhh-cCC----CCC-----EEEecccc-c-CC
Confidence 88 55555455 999999999999999999999986542 2111 1 011 111 222 68899999 4 79
Q ss_pred ceeEEEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 041151 281 QRGGYFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC 359 (463)
Q Consensus 281 ~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 359 (463)
+|+||++ +++++.+.+.... ..+++.+++.+.++.+.|+-.. .+. +.+..+.+.+.+ ++.+.+.+.+.
T Consensus 242 ~pig~v~---~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~--~~~---~~~~~~~~g~~l---~~~l~~~~~~~ 310 (382)
T PLN00144 242 LPIGAVL---VTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKIS--KPG---FLASVAKKGEYL---RELLRRKLGGN 310 (382)
T ss_pred cceEEEE---EcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh--hch---HHHHHHHHHHHH---HHHHHHHHhhC
Confidence 9999999 5888888886433 3577889999998885553110 011 122222233333 22333444444
Q ss_pred CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHH
Q 041151 360 RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMP 437 (463)
Q Consensus 360 pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~ 437 (463)
|.+.-+.. .|+++|+.+..+ ...+ ...+.++||.+.|+.. .+.+|++++ .++++++
T Consensus 311 ~~~~~vrg-~G~~~~l~l~~~--------------~~~~-~~~~~~~Gv~i~~~~~------~~~lrl~p~~~~~~~~i~ 368 (382)
T PLN00144 311 PHVKEVRG-VGLLVGIQLDVP--------------AGPL-VDACRDSGLLVLTAGK------GDVVRLVPPLVISEAELE 368 (382)
T ss_pred CCceeeec-CceEEEEEecCc--------------cHHH-HHHHHHCCeEEeecCC------CCEEEEeCCCccCHHHHH
Confidence 43322223 789999665311 2333 4556789999998621 247999999 6889999
Q ss_pred HHHHHHHHHHHHH
Q 041151 438 AIMESFKKFNDEF 450 (463)
Q Consensus 438 ~~~~~l~~~l~~~ 450 (463)
+++++|.+++.++
T Consensus 369 ~~~~~l~~~l~~~ 381 (382)
T PLN00144 369 QAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998653
No 198
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.6e-19 Score=181.04 Aligned_cols=204 Identities=10% Similarity=0.088 Sum_probs=142.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC--------------ceecCC
Q 041151 107 RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH--------------TTWKRQ 169 (463)
Q Consensus 107 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g--------------~~~~~~ 169 (463)
.....|++++|++++ .. ..+++ +++++++..++.+++ ++||+|+++ ++ +++ ..
T Consensus 61 p~~~~Le~~lA~~~g------~~-~~i~~-~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~-~~ 130 (388)
T PRK07811 61 PTRTALEEQLAALEG------GA-YGRAF-SSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEY-TP 130 (388)
T ss_pred ccHHHHHHHHHHHhC------CC-ceEEe-CCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEE-EE
Confidence 457899999999985 22 23444 455899999999998 999999997 33 222 11
Q ss_pred CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 170 QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 170 ~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
....|+ +.+++.+++ ++|+|++++|+||||.+.+ +++|+++|++++++||+|++|+..... . ++
T Consensus 131 ~d~~d~-e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~--~---p~- 194 (388)
T PRK07811 131 VDLSDL-DAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ--Q---PL- 194 (388)
T ss_pred eCCCCH-HHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC--C---ch-
Confidence 112578 999999877 8999999999999998755 778888999999999999999865331 1 11
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCC
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
.. . -.|++.|+||+++|..+.+.||+++ .++++.+++...+. .....+......+...|+
T Consensus 195 ~~--------g---aDivv~S~sK~l~g~~~~~gG~vv~--~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~------ 255 (388)
T PRK07811 195 AL--------G---ADVVVHSTTKYIGGHSDVVGGALVT--NDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK------ 255 (388)
T ss_pred hh--------C---CcEEEecCceeecCCCCcEEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC------
Confidence 11 1 1389999999994333467899986 46777777766554 233344444333333332
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+..+.++..++...+.+.|++.|++.
T Consensus 256 --------tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 256 --------TLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 233345556778888889998877654
No 199
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=1.8e-19 Score=179.99 Aligned_cols=201 Identities=12% Similarity=0.099 Sum_probs=145.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cC
Q 041151 107 RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KR 168 (463)
Q Consensus 107 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~ 168 (463)
....+|++.++++++ .+..++++++++|+..++.+++ ++||+|+++ + |+++ ..
T Consensus 40 p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 40 PTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALL-KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred hhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHc-CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 346788888888874 3566777778999999999998 899999997 2 2222 11
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
+ .-|+ +.+++.+++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .++
T Consensus 111 ~--~~d~-~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-----~~~ 173 (369)
T cd00614 111 D--PDDP-EALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-----RPL 173 (369)
T ss_pred C--CCCH-HHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC-----Chh
Confidence 1 1256 889888876 7999999999999999987 678888899999999999999865331 111
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcccCCCCC-ceeEEEEecCCCh-hHHHHHHhhhh-hcccCChHHHHHHHHhcCCCC
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPP-KTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLK 325 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~ 325 (463)
.+ +..+++.|+||.+ +.+| +++||++. ++ ++++.+..... .+...++....++...++
T Consensus 174 -~~-----------g~Divv~S~tK~l-~g~~~~~gG~v~~---~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~--- 234 (369)
T cd00614 174 -EL-----------GADIVVHSATKYI-GGHSDVIAGVVVG---SGEALIQRLRFLRLALGTILSPFDAWLLLRGLK--- 234 (369)
T ss_pred -hh-----------CCcEEEeccceec-cCCCCceEEEEEe---CcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC---
Confidence 11 1348899999999 5454 88999994 55 88888877654 344556555555444442
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 326 PGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+..+.++..++...+.+.|++.|++.
T Consensus 235 -----------tl~~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 235 -----------TLPLRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 122345567888889999999887653
No 200
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3.3e-19 Score=179.64 Aligned_cols=206 Identities=13% Similarity=0.117 Sum_probs=143.3
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC--------------
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH-------------- 163 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g-------------- 163 (463)
..|+.+ ....|++.++++++ . +..+++++++.++..++.+++ +|||+|+++ ++
T Consensus 60 ~r~~~p-~~~~le~~lA~l~g------~--~~~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 60 SRISNP-TLALLEQRMASLEG------G--EAAVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eCCCCc-hHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 344443 36789999998875 2 334566667889999999888 899999997 32
Q ss_pred cee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 164 TTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 164 ~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
+++ ..+ ..|+ +.+++++++ ++|+|++++|+||||.+.+ +++|.++|+++|++||+|++|+.... .
T Consensus 130 ~~v~~vd--~~d~-~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~--~ 195 (403)
T PRK07503 130 VTVRHVD--LTDP-AALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL--Q 195 (403)
T ss_pred EEEEEeC--CCCH-HHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc--C
Confidence 222 111 1267 999998877 7999999999999999987 67778888899999999999986533 1
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC-ceeEEEEecCCChhHHHHHHhh--hh-hcccCChHHHHHHH
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--AS-IALSPNVPAQIFMG 318 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~q~~~~ 318 (463)
. ++ .. . ..|+++|+||++ +.+| +|+||++ ++++++++++.. .. .+...+.+.+..+.
T Consensus 196 ~---~l-~~--------g---~Di~v~S~tK~l-~g~gd~~gG~v~---~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l 256 (403)
T PRK07503 196 R---PL-EL--------G---ADLVVHSATKYL-GGHGDITAGLVV---GGKALADRIRLEGLKDMTGAVMSPFDAFLLM 256 (403)
T ss_pred C---ch-hh--------C---CCEEEccccccc-cCCCceeEEEEE---cCHHHHHHHHhhhHHhCcCCCCCHHHHHHHH
Confidence 1 11 11 1 238999999999 6555 7889888 588888888743 32 23445555555444
Q ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 319 LMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
..|+ .+..+.++..++...+.+.|++.|.+.
T Consensus 257 ~~L~--------------tl~~r~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 257 RGLK--------------TLALRMDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred cCcc--------------hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 4432 222233445577777888888776554
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.8e-19 Score=180.84 Aligned_cols=283 Identities=12% Similarity=0.082 Sum_probs=181.0
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F-------------- 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~-------------- 162 (463)
+..|+.+. ..+|++.++++.+ .+++++++|+++++..++.+++ +|||+|+++ +
T Consensus 59 Y~r~~~pt-~~~Le~~lA~l~g--------~~~~l~~~sgt~Ai~~~l~al~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 59 YGLHATPT-SLALAQRLAEIEG--------GRHALLQPSGLAAISLVYFGLV-KAGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred cCCCCCHH-HHHHHHHHHHHhC--------CCeEEEeccHHHHHHHHHHHHh-CCCCEEEEecCCcccHHHHHHHHHHhc
Confidence 34454432 4677777877753 5789999999999999999998 999999997 2
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ .-+ ..+. +.+++.+++ ++|+|++++|+||+|. ..++++|+++|++++++||+|++|+...+
T Consensus 129 Gi~v~~vd--~~~~-~~l~~~i~~------~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~-- 194 (394)
T PRK07050 129 GITVRFYD--PLIG-AGIADLIQP------NTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGLA-- 194 (394)
T ss_pred CeEEEEEC--CCCH-HHHHHhcCC------CCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCcccccc--
Confidence 3333 111 1145 778888776 8999999999999874 56799999999999999999999976432
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHh
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLM 320 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~ 320 (463)
..++ . .+..|++.|+||.++|..+.+.|++++ ++++++++++..+. .+.+.++.....+...
T Consensus 195 ---~~~l-~-----------~GaDi~v~S~tK~~~g~~~~~gG~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 195 ---FKPF-E-----------HGVDISVQALTKYQSGGSDVLMGATIT--ADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred ---cCHH-H-----------cCCeEEEEECCceecCCCCeeEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 1111 1 112489999999996566678999886 67888888877665 4555566555444443
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cC-----------------CceeEEeeeccCChh
Q 041151 321 VNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCN-FT-----------------EGAMYSFPQIRLPPK 382 (463)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~-~~-----------------~g~~~~~~~~~~~~~ 382 (463)
++. +..+.++..++...+.+.|++.|++..+ .| .|+++.+ .+..+
T Consensus 258 l~t--------------l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~---~l~~~ 320 (394)
T PRK07050 258 LPS--------------LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSV---VFDER 320 (394)
T ss_pred CCc--------------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEE---EECCC
Confidence 331 1123444556666777777776554321 11 1333332 32211
Q ss_pred hHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC--C------------CCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 383 AIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ--K------------EGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~--~------------~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
. -..+.+.....|+..++.+.-|..... + ...+.+|||++. |+.+.+++.|.+++.
T Consensus 321 ~--------~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--E~~~dl~~dl~~al~ 390 (394)
T PRK07050 321 Y--------SPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--EDEADLIADLEQALE 390 (394)
T ss_pred C--------CHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc--CCHHHHHHHHHHHHH
Confidence 0 001122233445555554444433221 0 012579999996 467788888888876
Q ss_pred HH
Q 041151 449 EF 450 (463)
Q Consensus 449 ~~ 450 (463)
+.
T Consensus 391 ~~ 392 (394)
T PRK07050 391 AA 392 (394)
T ss_pred Hh
Confidence 54
No 202
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=2.9e-19 Score=178.99 Aligned_cols=207 Identities=13% Similarity=0.142 Sum_probs=145.9
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F-------------- 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~-------------- 162 (463)
+..|+.+ -..+|++.++++++ .+.+++++|+++++..++.+++ ++||+|+++ +
T Consensus 48 y~r~~~p-~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 48 YSRYANP-TVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLL-QAGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred eecCCCc-hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCCcchHHHHHHHHHHHh
Confidence 3455544 36789999998874 3577889999999999999998 899999996 2
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ ..+ ..|+ +.+++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ .
T Consensus 118 g~~v~~v~--~~d~-~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~-~ 184 (380)
T TIGR01325 118 GIEVSFVD--PTDL-NAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVL-Q 184 (380)
T ss_pred CCEEEEEC--CCCH-HHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C
Confidence 2332 111 1267 888888876 7999999999999999987 67778888899999999999986533 1
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGL 319 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~ 319 (463)
. ++ .+ . ..|++.|+||++ +.+|.++ |+++ +++++++.+.+... .....++.....+..
T Consensus 185 -~---pl-~~--------g---~Divv~S~sK~l-~g~g~~~gG~vv---~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~ 244 (380)
T TIGR01325 185 -Q---PL-KL--------G---ADVVVYSATKHI-DGQGRVMGGVIA---GSEELMAEVAVYLRHTGPAMSPFNAWVLLK 244 (380)
T ss_pred -C---ch-hh--------C---CCEEEeecccee-cCCCCeEEEEEE---eCHHHHHHHHHHHHhhCCCCCHHHHHHHHh
Confidence 1 11 11 2 237889999999 6688876 6666 68888888877654 333334343333322
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 320 MVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+ +.+..+.++..+++..+.+.|+++|++.
T Consensus 245 ~l--------------~tl~~r~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 245 GL--------------ETLSLRMQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred cc--------------CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 22 2222345556778888888898877654
No 203
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=4.7e-19 Score=176.49 Aligned_cols=272 Identities=13% Similarity=0.110 Sum_probs=175.1
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F-------------- 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~-------------- 162 (463)
+..|+.+ ....|++++|+++ . +++++++++++++..++.+++ ++||+|+++ +
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcC
Confidence 4556554 5789999999986 2 344555555689999999997 899999996 1
Q ss_pred CceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 163 HTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 163 g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
|+++.. ...+. + .+ .+.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|... + +
T Consensus 114 G~~v~~--v~~~~-~-~~-~~~~------~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~-~--~ 176 (366)
T PRK07582 114 GVTVRE--APTAG-M-AE-AALA------GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP-L--G 176 (366)
T ss_pred eEEEEE--ECCCC-h-HH-Hhcc------CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc-c--c
Confidence 333300 00111 1 11 2222 7899999999999998765 788888999999999999999642 1 1
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
.. ++ . + .. .++++|+||++.|.+|+|+||++. +++++++++...+. .....+++....+...+
T Consensus 177 ~~--p~-~----~----g~---Divv~S~sK~l~G~~g~~~G~v~~--~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l 240 (366)
T PRK07582 177 QR--PL-E----L----GA---DLVVASDTKALTGHSDLLLGYVAG--RDPELMAAVERWRLLAGAIPGPFEAWLAHRSL 240 (366)
T ss_pred cC--ch-h----c----CC---cEEEecccccccCCCCeeEEEEEc--CcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 11 11 1 1 22 278899999997778899999985 46788888887665 34455666665555555
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-------C-----------CceeEEeeeccCChhh
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-------T-----------EGAMYSFPQIRLPPKA 383 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-------~-----------~g~~~~~~~~~~~~~~ 383 (463)
+. +..+.++..++...+.+.|++.|.+..+. | .||++.+ ++.
T Consensus 241 ~t--------------l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~---~~~--- 300 (366)
T PRK07582 241 GT--------------LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSF---ELA--- 300 (366)
T ss_pred cc--------------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEE---EeC---
Confidence 31 22233556678888999998877654221 2 3554443 322
Q ss_pred HHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-------------CCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 384 IEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK-------------EGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~-------------~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
+.+.+.+.+...++... +..+|.. -..+.+|+|++. |+.+..++.|.+++++
T Consensus 301 -----------~~~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl--E~~~dli~dl~~al~~ 365 (366)
T PRK07582 301 -----------DAAAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGI--EDTDDLVADLERALDA 365 (366)
T ss_pred -----------CHHHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 12334566777676443 2223220 113579999995 3567777777777754
No 204
>PLN02651 cysteine desulfurase
Probab=99.85 E-value=1.5e-19 Score=180.58 Aligned_cols=292 Identities=15% Similarity=0.134 Sum_probs=191.8
Q ss_pred cHHHHHHHHHHhhhcCCCCC----ccCC--CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---c
Q 041151 82 PADAIARAKHYLSLTSGGLG----AYSD--SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---R 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~----~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~ 152 (463)
|+.+++++.+.+.....+.. .++. ..-..++|+.++++++ .++++|++|+|+++++..++..+. .
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~t~~~t~a~~~~l~~~~~~~~ 85 (364)
T PLN02651 12 DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG------ADPKEIIFTSGATESNNLAIKGVMHFYK 85 (364)
T ss_pred CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 88999999887654211111 1111 1113466777777765 567899999999999888776652 1
Q ss_pred CCCCEEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 153 GEGDGVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 153 ~~gd~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
++||+|+++ .|+++ ...++.+|+ +.+++++++ +++++++++++||||.+.+
T Consensus 86 ~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~-~~l~~~i~~------~t~lv~v~~~~n~tG~~~~-- 156 (364)
T PLN02651 86 DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDL-DELAAAIRP------DTALVSVMAVNNEIGVIQP-- 156 (364)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCH-HHHHHhcCC------CcEEEEEECCCCCceeccc--
Confidence 689999986 35554 234567899 999999987 7999999999999999988
Q ss_pred HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 292 (463)
+++|.++|+++|+++++|.+++.... +..+ ++.+-.+++.|.+|++ |++| +|++++ +
T Consensus 157 -l~~I~~~~~~~g~~~~vD~a~~~g~~-----~~~~-----------~~~~~D~~~~s~hK~~-gp~G--~g~l~v---~ 213 (364)
T PLN02651 157 -VEEIGELCREKKVLFHTDAAQAVGKI-----PVDV-----------DDLGVDLMSISGHKIY-GPKG--VGALYV---R 213 (364)
T ss_pred -HHHHHHHHHHcCCEEEEEcchhhCCc-----ccCc-----------ccCCCCEEEechhhhC-CCCc--eEEEEE---c
Confidence 67788889999999999999986322 1222 2222347889999965 7666 788886 4
Q ss_pred hhHHHHHHhhh-------h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcc
Q 041151 293 PKTVDEIYKIA-------S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS-CRNVV 363 (463)
Q Consensus 293 ~~~~~~l~~~~-------~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~pg~~ 363 (463)
++....+.... . ...+++.....++.++++ ......+.++++.++..+++.+.|.+ +||+.
T Consensus 214 ~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~----------~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~ 283 (364)
T PLN02651 214 RRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACE----------LAMKEMDYDEKHMKALRERLLNGLRAKLGGVR 283 (364)
T ss_pred CCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 43333332111 1 133455556666666653 22334566778888889999999975 67888
Q ss_pred cccCCc-----eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----------------CC
Q 041151 364 CNFTEG-----AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE----------------GI 422 (463)
Q Consensus 364 ~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~----------------~~ 422 (463)
+..|.. ...+. +.++.. +..+ +...|.+ |.++.|+.|.... ..
T Consensus 284 i~~~~~~~~~~~~i~~--~~~~~~-----------~~~~-~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~ 347 (364)
T PLN02651 284 VNGPRDPEKRYPGTLN--LSFAYV-----------EGES-LLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAH 347 (364)
T ss_pred EECCCCcccCcCCEEE--EEeCCC-----------CHHH-HHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhC
Confidence 876521 11222 222211 2334 3444554 9999998775421 13
Q ss_pred cEEEEEec--CCcCcHH
Q 041151 423 FHLRTTIL--PAEEDMP 437 (463)
Q Consensus 423 ~~lRis~~--~~~e~i~ 437 (463)
+.+|+|++ ++++|++
T Consensus 348 ~~vR~S~~~~~t~~did 364 (364)
T PLN02651 348 GSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ceEEEEcCCCCCHHHcC
Confidence 58999999 7777653
No 205
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=4.3e-19 Score=182.22 Aligned_cols=313 Identities=11% Similarity=0.121 Sum_probs=193.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC--------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG-------- 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------- 153 (463)
++.+++++.+.+.........+. .....+|.+.+++++ ..+.+++++++++++..+++... .
T Consensus 93 ~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~L~~~~--------~~~~~~f~~SGseA~e~AlklAr-~~~~~~~g~ 162 (474)
T PLN02624 93 HPKIIKALTEQAEKLTLSSRAFY-NDKFPEFAEYLTSMF--------GYDMVLPMNTGAEGVETAIKLAR-KWGYEKKGI 162 (474)
T ss_pred CHHHHHHHHHHHHhcCCcccccC-CHHHHHHHHHHHhhc--------CCCeEEEeCChHHHHHHHHHHHH-HHHHhhcCC
Confidence 78999999998886321111111 122234555555442 23689999999999999998543 2
Q ss_pred -CCCEEEEc-----cCcee--------c--CCCc-----------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc
Q 041151 154 -EGDGVVLL-----FHTTW--------K--RQQI-----------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTG 206 (463)
Q Consensus 154 -~gd~Vlvp-----~g~~~--------~--~~~~-----------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG 206 (463)
++...++. +|... + ...+ -.|+ +.+++.++.. +.++.+|++..++|++|
T Consensus 163 ~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~---~~~iaaiiiEpv~~~~G 238 (474)
T PLN02624 163 PKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDL-DALEKIFEED---GDRIAAFLFEPIQGEAG 238 (474)
T ss_pred CCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCH-HHHHHHHHhC---CCCEEEEEECCccCCCC
Confidence 13434443 33211 0 0000 0167 8899888642 23688999999999999
Q ss_pred cCCCHHH-HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEE
Q 041151 207 QCLSEAN-LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGY 285 (463)
Q Consensus 207 ~~~s~~~-l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~ 285 (463)
.++++++ +++|.++|++||+++|+||+|..+..+ +. .... ... +.. .-+.++||.+ |.+++++|+
T Consensus 239 ~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Grt-G~----~~a~-~~~----~i~---pDiv~lsK~l-ggG~~piga 304 (474)
T PLN02624 239 VVIPPDGYLKAVRELCSKHNVLMIADEIQTGLART-GK----MLAC-DWE----EVR---PDVVILGKAL-GGGVIPVSA 304 (474)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcC-cc----hhhH-Hhc----CCC---CCEEEecccc-cCCCCccee
Confidence 9887774 999999999999999999999865432 11 1111 011 111 1234478999 767799999
Q ss_pred EEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CC
Q 041151 286 FEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----CR 360 (463)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~p 360 (463)
++ .++++++.+..... .+++.+++.+.++.+.|+. +.+ ..+.++..++.+.+.+.|++ +|
T Consensus 305 v~---~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~-----------l~~-~~l~~~~~~~~~~l~~~L~~l~~~~~ 369 (474)
T PLN02624 305 VL---ADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQV-----------VQD-EKLAERSAKLGQELRDQLQKIQKQFP 369 (474)
T ss_pred ee---ecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHH-----------HHh-chHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99 47778777754443 4567888999888888741 111 12333444444455544443 22
Q ss_pred C-cccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHH
Q 041151 361 N-VVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMP 437 (463)
Q Consensus 361 g-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~ 437 (463)
. +....+.|.++.+ .+..+.. +.....+++. .|.++||.+.|+. .+++||++. .++++++
T Consensus 370 ~~i~~vrg~G~~~~i-~l~~~~~--------~~~~a~~~~~-~L~e~GV~v~p~~-------~~~lR~~p~l~~t~e~id 432 (474)
T PLN02624 370 KLIKEVRGRGLLNAV-VLNSPKL--------GPVSAYDVCL-KLKERGLLAKPTH-------DTIIRLAPPLSISEDELQ 432 (474)
T ss_pred CceEEEEeeEEEEEE-EecCCCc--------ChHHHHHHHH-HHHhCCeEEecCC-------CCEEEEECCccCCHHHHH
Confidence 1 3334455655542 2332110 0001334444 4678999998852 247999975 8899999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 041151 438 AIMESFKKFNDEFMEQY 454 (463)
Q Consensus 438 ~~~~~l~~~l~~~~~~~ 454 (463)
+++++|++++++-..++
T Consensus 433 ~~l~~L~~~l~~~~~~~ 449 (474)
T PLN02624 433 ECSKALSDVLEHDLPKL 449 (474)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999988754433
No 206
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=4.5e-19 Score=178.38 Aligned_cols=207 Identities=13% Similarity=0.145 Sum_probs=149.6
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------c
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------F 162 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~ 162 (463)
+..|+.+. ..+|++.+|++.+ .++.+++++++.++..++.+++ ++||+|+++ .
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIEG--------AEACFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHc
Confidence 45566554 6789999999874 3477777888899999999998 899999986 3
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ ..+ ..|+ +.+++++++ ++++|++++|+||||.+.+ +++|+++|++++++||+|++|+...+.
T Consensus 134 G~~v~~vd--~~d~-~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~- 200 (403)
T PRK07810 134 GVETVFVD--GEDL-SQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ- 200 (403)
T ss_pred CcEEEEEC--CCCH-HHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC-
Confidence 4444 111 2377 999999887 7999999999999999986 777888888999999999999865431
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHH-HHHhhhh-hcccCChHHHHHHH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVD-EIYKIAS-IALSPNVPAQIFMG 318 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~~~~ 318 (463)
. ++ . . + ..|++.|+||.+ +.+|.++ ||++ ++++.+. .++.... .....+++.+..+.
T Consensus 201 -~---~~-~----~----g---aDivv~S~tK~l-~g~g~~~gG~v~---~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l 260 (403)
T PRK07810 201 -R---GL-P----L----G---ADVVVYSGTKHI-DGQGRVLGGAIL---GDREYIDGPVQKLMRHTGPALSAFNAWVLL 260 (403)
T ss_pred -C---hh-h----c----C---CcEEEccCCcee-cCCcCceeEEEE---eChHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 1 11 1 1 1 247899999999 7788887 7776 4666554 4554433 34566777666666
Q ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 319 LMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
..|+ .+..+.++..++...+.+.|++.|++.
T Consensus 261 ~~L~--------------tl~~R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 261 KGLE--------------TLALRVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred hccC--------------cHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 6553 233345556777777888888877654
No 207
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.4e-18 Score=173.19 Aligned_cols=209 Identities=11% Similarity=0.125 Sum_probs=149.4
Q ss_pred CccCCC--CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee---------
Q 041151 101 GAYSDS--RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW--------- 166 (463)
Q Consensus 101 ~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~--------- 166 (463)
..|+.. .+...|+++||++.+ .+++++++|+++|+..++.+++ ++||+|+++ ++...
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all-~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFL-KAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 346552 234699999998853 3578999999999999999998 899999997 21111
Q ss_pred ---cCCCcc-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 167 ---KRQQIG-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 167 ---~~~~~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
....+. -+. +.+++++++ ++|+|++++|+||||.+ .++++|+++|+++|+++++|++|+....
T Consensus 124 ~Gi~v~~v~~~~~-e~l~~~l~~------~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~p~~--- 190 (394)
T PRK09028 124 FGIETTYYDPMIG-EGIRELIRP------NTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWASPIN--- 190 (394)
T ss_pred cceEEEEECCCCH-HHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCcccccc---
Confidence 000111 144 778888776 89999999999999877 5689999999999999999999986422
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
. .++ . + +-.|++.|.+|+++|..++..|+++ .++++.+.+..... .....++.....+..-|
T Consensus 191 ~--~Pl-~----~-------GaDivv~S~tK~l~Gh~d~~~G~~~---~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl 253 (394)
T PRK09028 191 S--RPF-E----M-------GVDISIQAATKYIVGHSDVMLGTAT---ANEKHWDQLREHSYLMGQCTSPDDVYLAMRGL 253 (394)
T ss_pred C--Ccc-c----c-------CceEEEEeCCeEecCCCCEEEEEEE---CCHHHHHHHHHHHHhcCCCCCHHHHHHHHccc
Confidence 1 111 1 1 1248999999999888889999876 57777777765543 34445555554444444
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+ .+.-+.++..++...+.+.|++.|.+
T Consensus 254 ~--------------TL~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 254 R--------------TLGVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred C--------------cHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3 23334556788888899999987655
No 208
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=1.9e-18 Score=174.15 Aligned_cols=308 Identities=15% Similarity=0.117 Sum_probs=199.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C--C
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G--E 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~--~ 154 (463)
++.+.+++.+++... . .++... ..+...++++.+.+..+ ..+.+++++++++|+..+++.... + +
T Consensus 58 ~p~v~~ai~~q~~~~---~-~~~~~~-~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~ 129 (408)
T PRK04612 58 DPDLVAALTEQAGKL---W-HTSNVF-YSAPPLKLAEELVTASR---FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPA 129 (408)
T ss_pred CHHHHHHHHHHHHhc---c-cccccc-CCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCC
Confidence 788999998888762 1 122111 23445566666654311 126899999999999999986531 1 2
Q ss_pred CC-EEEEc----cCcee--------c--C-------CC----cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 155 GD-GVVLL----FHTTW--------K--R-------QQ----IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 155 gd-~Vlvp----~g~~~--------~--~-------~~----~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
+. +|+.- +|... + . .+ .-.|. +.+++.+.. +..+.++..|.+++|.+
T Consensus 130 ~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~~~~------~~~aavi~eP~~~~gg~ 202 (408)
T PRK04612 130 DKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDV-EALEAAMAG------GDVAAVMLEPIQGEGGV 202 (408)
T ss_pred CCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCH-HHHHHhhCC------CCEEEEEECCccCCCCC
Confidence 23 45553 33221 0 0 00 11266 888887753 45666788888888877
Q ss_pred CC--HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 209 LS--EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 209 ~s--~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
++ .+.+++|.++|++|++++|+||+|..+... +. .+... ..+.+..+.||||.+ + +|+|+||+
T Consensus 203 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~---~~a~~---------~~~~~pdi~t~~K~l-~-~G~piga~ 267 (408)
T PRK04612 203 MPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT-GT---LFAHW---------QEQVTPDIVTLAKAL-G-GGFPIGAM 267 (408)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-Cc---hhhhh---------hcCCCCCEEEEcchh-c-CCCceEEE
Confidence 66 568999999999999999999999875442 11 12111 112356788999999 6 79999999
Q ss_pred EecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 041151 287 EMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC----RN 361 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----pg 361 (463)
+ +++++.+.+.... ..+++.+++.+.++.+.|+ .+++ .++.++.+++.+++.+.|+++ +-
T Consensus 268 ~---~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~-----------~~~~-~~l~~~~~~~g~~l~~~l~~l~~~~~~ 332 (408)
T PRK04612 268 L---AGPKVAETMQFGAHGTTFGGNPLAAAVARVALR-----------KLAS-PQIAANVARQSAALRAGLEALNAEFGV 332 (408)
T ss_pred E---ECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8 4778887776543 3567788999999988874 2222 345666777777777777664 22
Q ss_pred cccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHH
Q 041151 362 VVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAI 439 (463)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~ 439 (463)
+..+...|-++.. .+.-+.. .....+...+.++||.+.+. +.+.+|+... .+++|++++
T Consensus 333 i~~vrg~Gl~~~i-~~~~~~~-----------~~a~~i~~~l~~~Gvlv~~~-------g~~~lRl~Ppl~it~eeid~~ 393 (408)
T PRK04612 333 FAQVRGRGLMLGA-VLAPAHA-----------GQAGAILDLAAEHGLLLLQA-------GPDVLRFVPALNLTDAELADG 393 (408)
T ss_pred eeeeeccceEEEE-EecCchh-----------hHHHHHHHHHHHCCeEEeeC-------CCCEEEEcCCccCCHHHHHHH
Confidence 2233444533332 2210000 12233455677899999762 2247999987 789999999
Q ss_pred HHHHHHHHHHHHHH
Q 041151 440 MESFKKFNDEFMEQ 453 (463)
Q Consensus 440 ~~~l~~~l~~~~~~ 453 (463)
+++|.+++.++.++
T Consensus 394 l~~l~~~l~~~~~~ 407 (408)
T PRK04612 394 LARLRLALADYVAQ 407 (408)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999876543
No 209
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.4e-18 Score=173.96 Aligned_cols=204 Identities=13% Similarity=0.139 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-----------cCCCccc
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-----------KRQQIGV 173 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-----------~~~~~~~ 173 (463)
...+|++.+|++++ .+++++++|+++++..++.+++ ++||+|+++ ++... ......+
T Consensus 54 ~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll-~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~ 124 (385)
T PRK08574 54 TLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLL-KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP 124 (385)
T ss_pred cHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC
Confidence 46899999999975 4678888899999999999998 899999997 22211 1111235
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHH
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLM 253 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 253 (463)
|. +.+++++++. ++|+|++++|+||||.+++ +++|+++|+++|++||+|++|+.... ..++ .
T Consensus 125 d~-~~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~-----~~~l-~--- 186 (385)
T PRK08574 125 ST-EDIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL-----YRPL-R--- 186 (385)
T ss_pred CH-HHHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc-----CChh-h---
Confidence 77 8999888752 6899999999999999998 66788889999999999999975322 1111 1
Q ss_pred hcCCCCCCCceEEEEecCCcccCCCCCce-eEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchH
Q 041151 254 DMGLPFSKEVQLVSFHTVSKGYWGECGQR-GGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISY 331 (463)
Q Consensus 254 ~~~~~~~~~~~~i~~~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~ 331 (463)
. + ..+++.|+||++ +.+|-. .|++++ ++++++++++..+. .+...+++....+...++
T Consensus 187 -~----G---aDivv~S~sK~l-~g~~d~~gG~vi~--~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~--------- 246 (385)
T PRK08574 187 -H----G---ADFVVHSLTKYI-AGHNDVVGGVAVA--WSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK--------- 246 (385)
T ss_pred -h----C---CcEEEeeCceee-cCCCCceeEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---------
Confidence 1 1 248999999999 555644 576665 67888888876655 333444443333333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 332 EQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+..+.++..++...+.+.|++.|.+.
T Consensus 247 -----tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 247 -----TLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 122334455667777888888776553
No 210
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.84 E-value=7e-20 Score=171.50 Aligned_cols=281 Identities=15% Similarity=0.198 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC---CCC--EEEEc---cC---cee-----cCCCcc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG---EGD--GVVLL---FH---TTW-----KRQQIG 172 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~---~gd--~Vlvp---~g---~~~-----~~~~~~ 172 (463)
.++|.+.|.+.++.--+.-++.--|++++|++|++..++.+|... .+. .|+.. +- ... ....|.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 478888888887544344344448999999999999999999622 122 33332 11 111 111233
Q ss_pred cChHHHHHHHHHHHHhcCCceeEE-EEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAM-VIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i-~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
-|. ..+.+ . ......| ++++||||.|.+ .+. +++..+..+|.|-+|.+-.|++ ....+
T Consensus 125 Gda-~~~~~---~----~~~~~~IElVTSPNNPDG~l-----r~~---V~~g~~~k~I~D~AYYWPhyTp---I~~~a-- 183 (363)
T PF04864_consen 125 GDA-SNFKN---S----DNPSPYIELVTSPNNPDGQL-----REA---VLNGSSGKVIHDLAYYWPHYTP---ITAPA-- 183 (363)
T ss_dssp EEC-CCGTT--------S-CCGEEEEEESS-TTT--------------SSTTTEEEEEEE-TT-STTTS------S-B--
T ss_pred ccH-Hhhcc---C----CCCCCeEEEEeCCCCCcccc-----cch---hcCCCCcceeeeeeeecccccc---cCCCC--
Confidence 333 22210 0 0024555 788999999997 333 3356788899999999877731 11111
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCC---
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPG--- 327 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~--- 327 (463)
++ .|.+.|+||.- |.+|.|+||+++ .++++.+++.++.. .+.+++.-+|.-++.+|+....+
T Consensus 184 --------D~---DiMLFT~SK~T-GHAGSR~GWAlV--KD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~ 249 (363)
T PF04864_consen 184 --------DH---DIMLFTLSKLT-GHAGSRFGWALV--KDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGT 249 (363)
T ss_dssp -------------SEEEEEHHHHC-S-GGG-EEEEEE--S-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCH
T ss_pred --------CC---ceEEEEEeccc-Cccccccceeee--cCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccC
Confidence 33 38999999998 999999999999 78999999999886 78999999999998887631100
Q ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCc--------ccccCCceeEEeeeccCChhhHHHHhhcC
Q 041151 328 ---DISYEQFVRESKGILESLRRRARMMTDGFNSC-----RNV--------VCNFTEGAMYSFPQIRLPPKAIEAAKRAG 391 (463)
Q Consensus 328 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----pg~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
...+.++ -++.+++|-+.|.+.+..- |.+ +-.....+-|.|++++-++
T Consensus 250 ~~~~~~~F~f------~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---------- 313 (363)
T PF04864_consen 250 EKGTEDIFHF------GYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---------- 313 (363)
T ss_dssp HTTTTSHHHH------HHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG----------
T ss_pred CCCccchHHH------HHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc----------
Confidence 0011112 1223344444445555432 111 1112235579998887432
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHH
Q 041151 392 KVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKF 446 (463)
Q Consensus 392 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~ 446 (463)
+ ..|...|++.||.-+.|..||. +..++|||+..++++++.++++|.++
T Consensus 314 ---d-~DC~~~l~~~~I~tr~G~~fga--~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 314 ---D-EDCYAVLREAKIITRSGVLFGA--DSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp ---G-SSHHHHHHCTTEEEEEGGGGTS---TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred ---c-ccHHHHHHhCCcccCCCCccCC--CCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 2 2377889999999999999997 45699999999999999999999764
No 211
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.84 E-value=4.1e-18 Score=170.75 Aligned_cols=295 Identities=16% Similarity=0.202 Sum_probs=203.5
Q ss_pred CcHHHHHHHHHHhhhcCCCC--CccCC----CCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHH---
Q 041151 81 FPADAIARAKHYLSLTSGGL--GAYSD----SRGIPGVRKEVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCV--- 150 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~--~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l--- 150 (463)
+|+.+++++.+.+....... ..+.. ..-..++|+.++++++ .++ ++|++++|++.++..++..+
T Consensus 11 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~~t~a~~~~~~~l~~~ 84 (371)
T PF00266_consen 11 MPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSNGTEALNAVASSLLNP 84 (371)
T ss_dssp -BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccccchhhhhhhhccccc
Confidence 38999999988877532111 11111 1122478888888886 667 79999999999999999999
Q ss_pred hcCCCCEEEEc-----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 151 IRGEGDGVVLL-----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 151 ~~~~gd~Vlvp-----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
+ ++|++|++. .|.++ ...+..+|+ +.+++.+++ ++++|+++..+|-||...
T Consensus 85 ~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~-~~~~~~l~~------~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 85 L-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDL-EDLEEALNP------DTRLVSISHVENSTGVRN 156 (371)
T ss_dssp G-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSH-HHHHHHHHT------TESEEEEESBETTTTBBS
T ss_pred c-ccccccccccccccccccccccccccchhhhccccccccchhhh-hhhhhhhcc------ccceEEeecccccccEEe
Confidence 6 799999886 46665 345667898 999999986 899999999999999999
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +++|.++|+++++++++|.+++.... ...+ .+.+-.+++.|..| |+|.+| +|++++
T Consensus 157 p---i~~I~~~~~~~~~~~~vD~~~~~g~~-----~id~-----------~~~~~D~~~~s~~K-l~gp~G--~g~l~v- 213 (371)
T PF00266_consen 157 P---IEEIAKLAHEYGALLVVDAAQSAGCV-----PIDL-----------DELGADFLVFSSHK-LGGPPG--LGFLYV- 213 (371)
T ss_dssp S---HHHHHHHHHHTTSEEEEE-TTTTTTS-----S--T-----------TTTTESEEEEESTS-TTSSST--EEEEEE-
T ss_pred e---eceehhhhhccCCceeEechhccccc-----cccc-----------cccccceeeecccc-cCCCCc--hhhhee-
Confidence 8 77788888899999999999986432 1222 22233479999999 668888 799986
Q ss_pred CCChhHHHHHHhhhh-h---------------------cccCChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHH
Q 041151 290 NIPPKTVDEIYKIAS-I---------------------ALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLR 346 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~-~---------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (463)
+++.++++..... . ..+++.....++..+++ .+ ..-.++++++..
T Consensus 214 --~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~~ 281 (371)
T PF00266_consen 214 --RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALK----------LLEEIGIERIRERIR 281 (371)
T ss_dssp --EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHH----------HHHHHHHHHHHHHHH
T ss_pred --hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHh----------hhhccccccchhhhh
Confidence 8888888853321 0 01333444444444442 12 112566788888
Q ss_pred HHHHHHHHHhhcCCCcccccC-----CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC--
Q 041151 347 RRARMMTDGFNSCRNVVCNFT-----EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK-- 419 (463)
Q Consensus 347 ~~~~~l~~~L~~~pg~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~-- 419 (463)
+..+++.+.|.+++++.+..| .++.. .+.++ .. +.+.+...|++.||.+..|..+..+
T Consensus 282 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~-~~~~~--~~------------~~~~~~~~L~~~~I~~~~G~~~~~~~~ 346 (371)
T PF00266_consen 282 ELAEYLREALEELPGIEVLGPDDEPRRPSIV-SFNLP--GS------------DADDVVKYLEERGIAVSTGSACAGPSL 346 (371)
T ss_dssp HHHHHHHHHHHHTTTEEESSSSCGGBGTTEE-EEEET--TS------------SHHHHHHHHHHHTEEEEESTTTCHHHH
T ss_pred hHHHHHHhhhhcCCceeEeeecccccccceE-EEeec--CC------------CHHHHHHHHhhcCEEEeccCcccHHHH
Confidence 889999999999988777543 12333 32232 11 3344566677789999998776511
Q ss_pred ---CCCcEEEEEec--CCcCcHHHH
Q 041151 420 ---EGIFHLRTTIL--PAEEDMPAI 439 (463)
Q Consensus 420 ---~~~~~lRis~~--~~~e~i~~~ 439 (463)
.-.+.+|+|+. ++++|++++
T Consensus 347 ~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 347 DILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHhCCCCEEEEeccCCCCHHHHhhC
Confidence 01258999999 888888764
No 212
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=176.98 Aligned_cols=315 Identities=13% Similarity=0.102 Sum_probs=200.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++.+. ....+.. ...+...++++.+.+.... -..+.+++++++++|+..+++....-.| ..|+.
T Consensus 58 ~p~v~~ai~~ql~~~--~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~ 132 (421)
T PRK06777 58 HPKVVAAVRQQLDQF--THTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIA 132 (421)
T ss_pred CHHHHHHHHHHHhhc--ccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEE
Confidence 678999998888763 1111211 1123444556655433110 1135899999999999999986531123 34544
Q ss_pred c----cCcee-----cC------CCcc---------------------cChHHHHHHHHHHHHhcCCceeEEEEECCCCC
Q 041151 161 L----FHTTW-----KR------QQIG---------------------VLIINDLQQSVAQARSKGITVRAMVIINPGNP 204 (463)
Q Consensus 161 p----~g~~~-----~~------~~~~---------------------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NP 204 (463)
- +|... .. ..++ .++ +.+++.++.. ....++.+|++.-..+.
T Consensus 133 ~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~l~~~~~~~-~~~~~iaavi~Epv~~~ 210 (421)
T PRK06777 133 FGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEAL-SSVERLFKAD-IAPDQVAAILLEPIQGE 210 (421)
T ss_pred EcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHH-HHHHHHHHhc-cCCCceEEEEECCccCC
Confidence 3 22221 00 0000 124 6677776531 01125677777655667
Q ss_pred Ccc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee
Q 041151 205 TGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG 283 (463)
Q Consensus 205 tG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 283 (463)
.|. +++.+.+++|.++|++||+++|+||+|..+.++ +. ..+.. .+++ .. . +.++||.+ + +|+|+
T Consensus 211 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~-g~-~~~~~----~~~~--~p---D--iv~~sK~l-~-~G~pi 275 (421)
T PRK06777 211 GGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFART-GK-LFAME----YYDV--KP---D--LITMAKSL-G-GGMPI 275 (421)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccC-Cc-hhhhh----hcCC--CC---C--EEeeehhh-c-CCCce
Confidence 775 678999999999999999999999999986552 22 11221 1211 11 1 23799999 6 89999
Q ss_pred EEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 041151 284 GYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC--- 359 (463)
Q Consensus 284 G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 359 (463)
||++ +++++++.+..... .+++.+++.|.++.+.|+ ..++ +++.++++++.+++.+.|+++
T Consensus 276 gav~---~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~-----------~~~~-~~l~~~~~~~g~~l~~~L~~l~~~ 340 (421)
T PRK06777 276 SAVV---GRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD-----------VIAE-EKLCQRALILGAHLVEVLEKAKAS 340 (421)
T ss_pred EEEE---EcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 58888888765443 577889999999998874 2222 356777788888888888764
Q ss_pred -CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHH---HHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCc
Q 041151 360 -RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFY---CLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAE 433 (463)
Q Consensus 360 -pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~ 433 (463)
|.+..+.+.|.++.+ .+..+.. + .++.++ +...+.++||.+.|+..|+ +++||++. .++
T Consensus 341 ~~~i~~vrg~G~~~~i-~~~~~~~--------~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g-----~~lr~~ppl~i~~ 405 (421)
T PRK06777 341 CPAIVDIRARGSMVAV-EFNDPQT--------G-KPSPEFTRQYQRQALEEGLLLLSCGVHG-----NVIRFLYPLTIPD 405 (421)
T ss_pred CCCeEEecCceEEEEE-EEecCcc--------C-CccHHHHHHHHHHHHhCCeEEeecCCCC-----CEEEEeCCCCCCH
Confidence 445556788888764 1221210 0 012222 2233567999999987765 27999996 789
Q ss_pred CcHHHHHHHHHHHHH
Q 041151 434 EDMPAIMESFKKFND 448 (463)
Q Consensus 434 e~i~~~~~~l~~~l~ 448 (463)
+++++++++|.+++.
T Consensus 406 ~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 406 AQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998874
No 213
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2.1e-18 Score=173.13 Aligned_cols=270 Identities=12% Similarity=0.151 Sum_probs=170.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC--------------ceecCCCc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH--------------TTWKRQQI 171 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g--------------~~~~~~~~ 171 (463)
...|++.+|++++ .+ +.+++++| +.++..++. ++ ++||+|+++ ++ +++..- .
T Consensus 56 ~~~le~~lA~l~g------~~-~~v~~~sG-~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v-~ 124 (390)
T PRK08064 56 REALEDIIAELEG------GT-KGFAFASG-MAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV-D 124 (390)
T ss_pred HHHHHHHHHHHhC------CC-CeEEECCH-HHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEE-C
Confidence 4688888888875 33 45666666 668888886 55 799999997 33 222000 0
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
..|+ +.+++.+++ ++++|++++|+||||.+.+ +++|.++|+++++++|+|++|..... . .++ .+
T Consensus 125 ~~d~-~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~---~--~~~-~~ 188 (390)
T PRK08064 125 MTNL-EEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLL---Q--KPL-DL 188 (390)
T ss_pred CCCH-HHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccc---c--Cch-hh
Confidence 1267 889888876 7999999999999999976 66777788899999999999976432 1 111 11
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchH
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISY 331 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 331 (463)
+ ..+++.|+||.++|.+|+..|++++ +++++++.++..+. .++.....+.+.. ++..
T Consensus 189 --------g---~Divv~S~tK~~~G~~~~laG~~v~--~~~~~~~~l~~~~~-~~g~~~~~~~a~l-~~~g-------- 245 (390)
T PRK08064 189 --------G---ADVVLHSATKFLAGHSDVLAGLAVV--KDEELAQKLYFLQN-SFGAVLGVQDCWL-VLRG-------- 245 (390)
T ss_pred --------C---CcEEEeecceeccCCccceeEEEEe--CCHHHHHHHHHHHH-hcCCCCCHHHHHH-HHcc--------
Confidence 1 2478999999986666777888876 56788898888776 3333333333333 2221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccc-----------------CCceeEEeeeccCChhhHHHHhhcCCC
Q 041151 332 EQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNF-----------------TEGAMYSFPQIRLPPKAIEAAKRAGKV 393 (463)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 393 (463)
++.+..+.++..++...+.+.|++.|.+. +.. ..|+++. +++.
T Consensus 246 ---l~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s---f~~~------------- 306 (390)
T PRK08064 246 ---LKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLS---FTLQ------------- 306 (390)
T ss_pred ---cCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEE---EEEC-------------
Confidence 11122344455677777777777664432 111 1233332 2332
Q ss_pred ChHHHHHHHHHhcCe---EeeCCCC------------CCCC------C--CCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 394 PDVFYCLRLLEATGI---STVPGSG------------FGQK------E--GIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 394 ~~~~~~~~ll~~~gI---~v~pg~~------------f~~~------~--~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
+.+.+...+...++ .++-|.. +..+ . ..+.+|+|++. |+.+..++.|.+++++.
T Consensus 307 -~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl--e~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 307 -SEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL--ENVDDLIADFEQALSYV 383 (390)
T ss_pred -CHHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhc
Confidence 12234566677776 4444421 1111 1 14589999995 46777777787777764
No 214
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=2.4e-18 Score=172.73 Aligned_cols=272 Identities=9% Similarity=0.037 Sum_probs=176.3
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~~~ 170 (463)
...|++.+|++++ . ...++ +++++.++..++.+++ +|||+|+++ + |+++ ..
T Consensus 65 ~~~le~~lA~l~g------~-~~av~-~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-- 133 (389)
T PRK05968 65 VRAFEEMLAKLEG------A-EDARG-FASGMAAISSTVLSFV-EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYV-- 133 (389)
T ss_pred HHHHHHHHHHHhC------C-CcEEE-ECCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEe--
Confidence 5689999999875 2 23444 4555789999999888 899999996 2 3333 11
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
...|+ +.+++.+ + ++|+|++++|+||++ +..++++|+++|++++++||+|++|+...+. . ++ .
T Consensus 134 d~~d~-~~l~~~i-~------~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~--~---p~-~ 196 (389)
T PRK05968 134 DGRDE-EAVAKAL-P------GAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQ--R---PI-T 196 (389)
T ss_pred CCCCH-HHHHHhc-c------cCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhcc--C---ch-h
Confidence 12377 8898887 4 689999998777755 4578999999999999999999999865431 1 11 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh--hcccCChHHHHHHHHhcCCCCCCC
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS--IALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
. + -.+++.|+||.+.|..+++.|+++ +++++++++++... .....+++.+..+...|+
T Consensus 197 ~--------g---~Divv~S~tK~l~g~~~~~gG~i~---~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~------ 256 (389)
T PRK05968 197 L--------G---VDLVIHSASKYLGGHSDTVAGVVA---GSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLR------ 256 (389)
T ss_pred c--------C---CcEEEeeccccccCCCCeEEEEEE---ECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccC------
Confidence 1 1 137889999999433346889888 58888888876543 233455555555544443
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CC---------ceeEEeeeccCChhhHHHHhhcCCCChHHH
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-TE---------GAMYSFPQIRLPPKAIEAAKRAGKVPDVFY 398 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (463)
.+..+.++..++...+.+.|+++|++..+. |. .++.-.+.+++..+. +..++
T Consensus 257 --------tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~----------~~~~f 318 (389)
T PRK05968 257 --------TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGI----------DVRAF 318 (389)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHH----------HHHHH
Confidence 122344455666778889999888875443 31 122212223432221 13344
Q ss_pred HHHHHHhcCeEeeCCCCCC------------C-C-----C--CCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 399 CLRLLEATGISTVPGSGFG------------Q-K-----E--GIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 399 ~~~ll~~~gI~v~pg~~f~------------~-~-----~--~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
+ ..|+..++.+.-|..+. . . . ..+.+|+|++. |+.+.+++.|++++++
T Consensus 319 ~-~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--E~~~dl~~dl~~al~~ 386 (389)
T PRK05968 319 A-DALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL--EGTEALWADLEQALAA 386 (389)
T ss_pred H-HhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHH
Confidence 3 44666677776666554 0 0 0 14589999995 4677888888887764
No 215
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=2.4e-18 Score=176.15 Aligned_cols=324 Identities=11% Similarity=0.094 Sum_probs=189.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+.+.... ..+...-..+.+.++|+.+.+..... ..+.+++++++++|+..+++.... .....|+.
T Consensus 72 ~p~v~~ai~~q~~~~~----~~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~ 146 (451)
T PRK06918 72 HPKVKEALHKQVDQYI----HTGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVENAVKIARKYTKRQGIIS 146 (451)
T ss_pred CHHHHHHHHHHHHhcc----CccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEE
Confidence 6789999988887621 11111112345566666665432110 115899999999999999986531 12234444
Q ss_pred c----cCcee-----cC--C------------------------CcccCh-------HHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW-----KR--Q------------------------QIGVLI-------INDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~-----~~--~------------------------~~~~d~-------~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
- +|... .. . ..+... ++.+++.+.... ...++-+| |
T Consensus 147 ~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAav-i 224 (451)
T PRK06918 147 FSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAV-V 224 (451)
T ss_pred ECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEE-E
Confidence 3 22211 00 0 001100 022333332100 11144554 5
Q ss_pred ECCCCCC-ccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC
Q 041151 199 INPGNPT-GQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW 276 (463)
Q Consensus 199 ~~p~NPt-G~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 276 (463)
..|.+.. |.++ +.+.+++|.++|++||+++|+||+|..+.+. +. ..++.. + +.. --+.|+||.+
T Consensus 225 ~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~-g~-~~a~~~----~----~v~---pDi~t~sK~l- 290 (451)
T PRK06918 225 MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFART-GK-YFAIEH----F----DVV---PDLITVSKSL- 290 (451)
T ss_pred ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCcc-Cc-eehhHh----c----CCC---CCEEeeehhh-
Confidence 5565554 5544 5556999999999999999999999987652 22 222222 2 211 1145899999
Q ss_pred CCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 277 GECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDG 355 (463)
Q Consensus 277 g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (463)
+ +|+|+||++ +++++.+.+..... .+++.+++.|.++.+.++- ++ .....++.++..+.+.+.
T Consensus 291 ~-~G~pig~v~---~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~-----------i~-~~~~~~~~~~~g~~l~~~ 354 (451)
T PRK06918 291 G-AGVPISGVI---GRKEIMDESAPGELGGTYAGSPLGCAAALAVLDI-----------IE-KENLNDRAIELGKVVMNR 354 (451)
T ss_pred c-CCCccEEEE---EcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHH-----------HH-HCCHHHHHHHHHHHHHHH
Confidence 6 899999999 58888888865443 5788999999998777631 11 011222233333344443
Q ss_pred hhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 356 FNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 356 L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
|++ .|.+..+.+.|.++.|..+.-+... .........+...+.++||.+.|+..|+ +++|++++
T Consensus 355 l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~Gvlv~~~~~~~-----~~lrl~p~l 423 (451)
T PRK06918 355 FEEMKNKYNCIGDVRGLGAMCAFELVQDRKTK------EPDKTLTANICKEANKRGLLLLSAGTYG-----NVIRVLMPL 423 (451)
T ss_pred HHHHHhhCCCceeeccceeEEEEEEccCCCcC------CCcHHHHHHHHHHHHHCCeEEeecCCCC-----CEEEEECCC
Confidence 333 3333345567888887543211000 0000012233445678999999987664 37999997
Q ss_pred -CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.+++++++++++|.++++++.++
T Consensus 424 ~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 424 VITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999887655
No 216
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.83 E-value=2.8e-18 Score=174.26 Aligned_cols=319 Identities=13% Similarity=0.022 Sum_probs=185.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+.+. ....+.. ...+.+.++|+.+.+.... -..+.+++++++++|+..+++....-.| .+|+.
T Consensus 51 ~p~v~~a~~~ql~~~--~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~ 125 (420)
T TIGR00700 51 HPRVVDAVRTQVAEF--THTCFMV--TPYEGYVALAEKLNRIAPG-SGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVA 125 (420)
T ss_pred CHHHHHHHHHHHHhc--cCccccc--cCChHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEE
Confidence 678999998888763 1111111 1123344555555433110 1125899999999999999986531123 34444
Q ss_pred c----cCcee-----cC------CCc---------------------------ccChHHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW-----KR------QQI---------------------------GVLIINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~-----~~------~~~---------------------------~~d~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
- +|... .. ..+ .-++ +.+++.+... ....++.+|++
T Consensus 126 ~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~iAavi~ 203 (420)
T TIGR00700 126 FDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL-AAARAIFVID-VGANNVAALVI 203 (420)
T ss_pred ECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH-HHHHHHHHhh-cCCCcEEEEEE
Confidence 3 22111 00 000 0013 4566655311 11226778777
Q ss_pred ECCCCCCccCCCHH-HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 199 INPGNPTGQCLSEA-NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 199 ~~p~NPtG~~~s~~-~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
.--..-+|.+++.+ .+++|.++|++||+++|+||+|..+.+. +. +..+ ..+ + ....+.+|||.+ +
T Consensus 204 Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~-g~----~~a~-~~~----~---~~pDi~~lsK~l-~ 269 (420)
T TIGR00700 204 EPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART-GA----MFAC-EHE----G---PEPDLITTAKSL-A 269 (420)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc-ch----hHHH-hhc----C---CCCCEEEeeccc-c
Confidence 64455578766545 4999999999999999999999987552 21 1111 111 1 122345699999 6
Q ss_pred CCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 278 ECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 278 ~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
+|+|+||++ +++++++.+..... .+++.+++.|.++.+.++-.. .+ .+.+...++.+.++++ +.+..
T Consensus 270 -~G~pig~v~---~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~--~~---~~~~~~~~~g~~l~~~---L~~l~ 337 (420)
T TIGR00700 270 -DGLPLSGVT---GRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE--SE---GLIERARQIGRLVTDR---LTTLK 337 (420)
T ss_pred -CCcceEEEE---ecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH--hc---cHHHHHHHHHHHHHHH---HHHHH
Confidence 899999999 58888888864432 578889999999977763100 00 1112222222222222 22222
Q ss_pred hcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 357 NSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 357 ~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
..+|.+..+.+. |.++|+.+.-+.. ..++ ...+...+.++||.+.|+..|+ +++||+++ .
T Consensus 338 ~~~~~~~~vrg~-G~~~~i~~~~~~~---------~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~-----~~lRl~p~l~~ 402 (420)
T TIGR00700 338 AVDPRIGDVRGL-GAMIAVELVDPGT---------TEPDAGLAERIATAAHAAGLLLLTCGMFG-----NIIRFLPPLTI 402 (420)
T ss_pred hhCCCEEEeecc-ceEEEEEEecCCC---------CCccHHHHHHHHHHHHHCCeEEeccCCCC-----CEEEEECCCCc
Confidence 234444445555 4555644421100 0011 1223344578999999988775 37999987 6
Q ss_pred CcCcHHHHHHHHHHHHH
Q 041151 432 AEEDMPAIMESFKKFND 448 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~ 448 (463)
+++++++++++|.+++.
T Consensus 403 ~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 403 GDELLSEGLDILCAILA 419 (420)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 88999999999998874
No 217
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.83 E-value=9.8e-18 Score=167.78 Aligned_cols=306 Identities=14% Similarity=0.135 Sum_probs=182.9
Q ss_pred cHHHHHHHHHHhhhcC-------CCCCccC----CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH
Q 041151 82 PADAIARAKHYLSLTS-------GGLGAYS----DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV 150 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~-------~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 150 (463)
++.+.+++.+++..+. ....+.. ...-+.++|+.+|++++ . ++.+++++|. .++..++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~~~l~~~sG~-~a~~~~~~~~ 91 (370)
T PRK05937 20 SDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-PEAFIVPSGY-MANLGLCAHL 91 (370)
T ss_pred CHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CeEEEECChH-HHHHHHHHHh
Confidence 6777777777776641 1111222 22234678888888875 2 2346666665 5565666666
Q ss_pred hcCCCCEEEEc---cCc-----ee-c--CCC-cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHH
Q 041151 151 IRGEGDGVVLL---FHT-----TW-K--RQQ-IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREIL 218 (463)
Q Consensus 151 ~~~~gd~Vlvp---~g~-----~~-~--~~~-~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~ 218 (463)
. ++||.|++. ++. .. . ... ...|+ +.|++.++...+..+++.+|++++++|+||.+.+ +++|.
T Consensus 92 ~-~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~ 166 (370)
T PRK05937 92 S-SVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDL-DHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQII 166 (370)
T ss_pred C-CCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCH-HHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHH
Confidence 5 788999885 111 11 0 011 12577 9999999854222224567778899999999998 66777
Q ss_pred HHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH
Q 041151 219 RFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE 298 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 298 (463)
++|+++++++++|++|+...++. .. ..+. ..+ .-.+..+++.||||.+ |..| .|.+ ..++..+.
T Consensus 167 ~l~~~~~~~livDea~~~G~~g~-~g-~g~~---~~~----~~~~~~~~~~tlsK~~-g~~G--~~vl----~~~~~~~~ 230 (370)
T PRK05937 167 ALSKKYHAHLIVDEAHAMGIFGD-DG-KGFC---HSL----GYENFYAVLVTYSKAL-GSMG--AALL----SSSEVKQD 230 (370)
T ss_pred HHHHHcCCEEEEECCccccccCC-CC-CchH---Hhh----CCCCCcEEEEechhhh-hcCc--eEEE----cCHHHHHH
Confidence 88889999999999999755521 11 1111 111 1111236789999998 7767 3433 35666666
Q ss_pred HHhhh-h--hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCcccccCCceeEEe
Q 041151 299 IYKIA-S--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-RNVVCNFTEGAMYSF 374 (463)
Q Consensus 299 l~~~~-~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-pg~~~~~~~g~~~~~ 374 (463)
+.... . ...+.+.+...++.++++ ......+..++++++.++++.+.|... ++. ...++
T Consensus 231 ~~~~~~~~~~s~~~~~~~~~a~~aal~----------~l~~~~~~~~~~l~~l~~~l~~~l~~~~~~~-------~~~i~ 293 (370)
T PRK05937 231 LMLNSPPLRYSTGLPPHLLISIQVAYD----------FLSQEGELARKQLFRLKEYFAQKFSSAAPGC-------VQPIF 293 (370)
T ss_pred HHHhCCCCeecCCCCHHHHHHHHHHHH----------HHHhCcHHHHHHHHHHHHHHHHhcCCCCCCC-------EEEEE
Confidence 55322 2 233445555554444442 111112335566777777787777542 111 01122
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+ +.. ..+.+...|.++||.+.... . +..+++|+|+. ++++|++++++.|+++++++.+
T Consensus 294 --~--~~~------------~~~~~~~~L~~~gi~v~~~~--~--~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 294 --L--PGI------------SEQELYSKLVETGIRVGVVC--F--PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred --e--CCh------------hHHHHHHHHHHCCeeEEeeC--C--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 2 211 22345566788899886422 1 12347999999 8999999999999998877644
Q ss_pred H
Q 041151 453 Q 453 (463)
Q Consensus 453 ~ 453 (463)
.
T Consensus 354 ~ 354 (370)
T PRK05937 354 N 354 (370)
T ss_pred C
Confidence 3
No 218
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.9e-17 Score=167.68 Aligned_cols=307 Identities=10% Similarity=0.028 Sum_probs=188.0
Q ss_pred cHHHHHHHHHHh-hhcCC---CCCccCCCCCCHHHHH----HHHHHHHHhcCCCCCCCcE-EEcCCcHHHHHHHHHHHhc
Q 041151 82 PADAIARAKHYL-SLTSG---GLGAYSDSRGIPGVRK----EVAEFIERRDGYPSDPELI-FLTDGASKGVMQTLNCVIR 152 (463)
Q Consensus 82 p~~~~~a~~~~~-~~~~~---~~~~Y~~~~g~~~lr~----~ia~~~~~~~g~~~~~~~i-~~t~G~~~al~~~~~~l~~ 152 (463)
++.+++++...+ ..++. ....|+....+.+|.+ .++++++ .+.. +.+++++.|+..++.+++
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~alv~~~SG~~A~~~~l~al~- 111 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYANVQPHSGSQANGAVYLALL- 111 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCceEEecCCcHHHHHHHHHHhc-
Confidence 889999998875 44321 1111111223456666 6666664 3345 446778999999999998
Q ss_pred CCCCEEEEc---cCc------ee--------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 153 GEGDGVVLL---FHT------TW--------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 153 ~~gd~Vlvp---~g~------~~--------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
+|||+|+++ ++. ++ ....+.+|+ +.+++.++.. ++|+|++..+.+ |...
T Consensus 112 ~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~-~~le~~l~~~-----~~klVi~~~~~~--g~~~ 183 (416)
T PRK13034 112 KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDY-DEVEELAKEH-----KPKLIIAGFSAY--PREL 183 (416)
T ss_pred CCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCH-HHHHHHHhhc-----CCeEEEECCCcc--cccc
Confidence 999999997 222 21 112455899 9999988653 678887766554 4554
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+ +.+|.++|+++|+++|+|++|+...+..+....++ . .-.++++|+||++. |-..|+++.
T Consensus 184 d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~-----------~--~~Di~~~s~~K~l~---g~~GG~v~~- 243 (416)
T PRK13034 184 D---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF-----------P--HAHVVTTTTHKTLR---GPRGGMILT- 243 (416)
T ss_pred C---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC-----------C--CceEEEEeCcccCC---CCCCeEEEE-
Confidence 4 77777789999999999999987665322211111 1 13488999999983 333577764
Q ss_pred CCChhHHHHHHhhhhhc--ccCChHHHHHHHHhcCCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 041151 290 NIPPKTVDEIYKIASIA--LSPNVPAQIFMGLMVNPLKPGDISYEQFV-RESKGILESLRRRARMMTDGFNSCRNVVCNF 366 (463)
Q Consensus 290 ~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~ 366 (463)
.++.+.+.++.....+ .+.......++...+. +.. .+..+.++++.++.++|.+.|.+. |+.+..
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~----------~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~ 311 (416)
T PRK13034 244 -NDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFG----------EALQPEFKTYAKQVIANAQALAEVLKER-GYDLVS 311 (416)
T ss_pred -CcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHH----------HHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEecc
Confidence 3455555555433212 1122222222222221 111 112345788999999999999988 888764
Q ss_pred C-CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCC---CCCCCCCcEEEEEec------CCcCcH
Q 041151 367 T-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSG---FGQKEGIFHLRTTIL------PAEEDM 436 (463)
Q Consensus 367 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~---f~~~~~~~~lRis~~------~~~e~i 436 (463)
+ ..+...++.+..+. .+...+.+.|+++||.+.+-.. ...+.....+|+++. .+++|+
T Consensus 312 ~~~~t~i~~v~~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di 379 (416)
T PRK13034 312 GGTDNHLLLVDLRPKG------------LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEF 379 (416)
T ss_pred CCCCCcEEEEEcCCCC------------CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHH
Confidence 3 22334443344221 1334455678889999975211 111112346999966 357999
Q ss_pred HHHHHHHHHHHHH
Q 041151 437 PAIMESFKKFNDE 449 (463)
Q Consensus 437 ~~~~~~l~~~l~~ 449 (463)
+++++.|++++.+
T Consensus 380 ~~l~~~l~~~~~~ 392 (416)
T PRK13034 380 REIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988763
No 219
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.82 E-value=4e-18 Score=172.48 Aligned_cols=306 Identities=13% Similarity=0.123 Sum_probs=192.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--------C
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--------G 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------~ 153 (463)
++.+++++.+.+.........+ ...-+.+|.+.+++++ | .+.+++++++++++..+++.... .
T Consensus 55 ~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~ 125 (401)
T TIGR01885 55 HPKIVKALTEQAQKLTLSSRAF-YNDVFGEFAEYVTKLF----G----YDKVLPMNTGAEAVETAIKLARKWGYKVKGIP 125 (401)
T ss_pred CHHHHHHHHHHHHhcccccccc-CCHHHHHHHHHHHhhc----C----CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCC
Confidence 7889999988877632111111 1112234444444443 2 36899999999999999998520 1
Q ss_pred CCC-EEEEc---cCcee------cC-----CCc-----------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc
Q 041151 154 EGD-GVVLL---FHTTW------KR-----QQI-----------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ 207 (463)
Q Consensus 154 ~gd-~Vlvp---~g~~~------~~-----~~~-----------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~ 207 (463)
+|+ .|+.. +++.. .. ..+ -.|+ +.|++.++.. +.++.+|++..+++++|.
T Consensus 126 ~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~le~~l~~~---~~~~~avi~E~v~~~~G~ 201 (401)
T TIGR01885 126 ENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNL-EALEEALEDH---GPNVCAFIVEPIQGEAGV 201 (401)
T ss_pred CCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCH-HHHHHHHHhc---CCCEEEEEEeCccCCCCC
Confidence 344 44444 23221 00 001 1167 9999988642 226778888888999999
Q ss_pred CCCHH-HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 208 CLSEA-NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 208 ~~s~~-~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
+.+.+ .+++|.++|++|++++|+||+|..+.++ +. .... .. .+. .. .++ ++||.+ +..++|+||+
T Consensus 202 ~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~-G~-~~~~-~~-~~~----~~--di~---~~gK~l-~~g~~~ig~v 267 (401)
T TIGR01885 202 VVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT-GK-LLCV-DH-ENV----KP--DIV---LLGKAL-SGGVYPVSAV 267 (401)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-ch-hhHH-hh-cCC----CC--CEE---Eeeccc-cCCCCCcEEE
Confidence 88644 6999999999999999999999765432 21 1111 11 011 11 122 478999 6666999999
Q ss_pred EecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-Cc-c
Q 041151 287 EMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR-NV-V 363 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p-g~-~ 363 (463)
+ +++++++.+.... ..+++.+++.+.++.++|+ .... ..+.++.+++.+++.+.|++++ ++ .
T Consensus 268 ~---~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~-----------~i~~-~~l~~~~~~~~~~~~~~L~~l~~~~~~ 332 (401)
T TIGR01885 268 L---ADDDVMLTIKPGEHGSTYGGNPLACAVAVAALE-----------VLEE-EKLAENAEKLGEIFRDQLKKLPKPIIT 332 (401)
T ss_pred E---EcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHhccCCcee
Confidence 9 5888888876532 2456678888888888764 2221 1345567777888888898872 22 2
Q ss_pred cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 364 CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
...+.|.++.+ .++.+... .+..+++ ..|.++||.+.|+. ...+||+.. .++++++++++
T Consensus 333 ~~~g~g~~~~i-~~~~~~~~---------~~~~~l~-~~l~~~Gv~v~~~~-------~~~lRi~p~l~~t~~~i~~~l~ 394 (401)
T TIGR01885 333 EVRGRGLLNAI-VIDESKTG---------RTAWDLC-LKLKEKGLLAKPTH-------GNIIRLAPPLVITEEQLDEGLE 394 (401)
T ss_pred EEeecCeeEEE-EeccCcch---------hHHHHHH-HHHHhCCEEEEecC-------CCEEEEeCCccCCHHHHHHHHH
Confidence 23355666553 13322100 0133444 45667899998742 247999987 88999999999
Q ss_pred HHHHHH
Q 041151 442 SFKKFN 447 (463)
Q Consensus 442 ~l~~~l 447 (463)
+|++++
T Consensus 395 ~l~~~l 400 (401)
T TIGR01885 395 IIKKVI 400 (401)
T ss_pred HHHHHh
Confidence 998875
No 220
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.82 E-value=1.5e-17 Score=152.36 Aligned_cols=310 Identities=13% Similarity=0.121 Sum_probs=225.6
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEE--EcCCcHHHHHHHHHHHhc-CCCCEEEEc-------------
Q 041151 98 GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIF--LTDGASKGVMQTLNCVIR-GEGDGVVLL------------- 161 (463)
Q Consensus 98 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~~~~l~~-~~gd~Vlvp------------- 161 (463)
...+.|-|..|.+.++++.++.+-......+..++++ -+-+++.|+......+.+ =+..+|.+.
T Consensus 65 s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~ 144 (410)
T KOG1412|consen 65 SLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEK 144 (410)
T ss_pred hccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHH
Confidence 4568999999999999999988754333334555543 344667788877766541 134557774
Q ss_pred cCce-e------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccc
Q 041151 162 FHTT-W------KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEV 233 (463)
Q Consensus 162 ~g~~-~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Dea 233 (463)
.|.. + ..+...+|+ +.+...|+.. |.-..+++. ..|||||.-.++|++.+|+++.++.+.+.+.|-+
T Consensus 145 aGf~tv~~Y~yWd~~~k~~d~-e~~Lsdl~~A----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA 219 (410)
T KOG1412|consen 145 AGFTTVATYPYWDAENKCVDL-EGFLSDLESA----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA 219 (410)
T ss_pred cCCceeeeeeeecCCCceecH-HHHHHHHhhC----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh
Confidence 5522 2 556677899 9998888873 223444555 5599999999999999999999999999999999
Q ss_pred ccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh----h-hhccc
Q 041151 234 YQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI----A-SIALS 308 (463)
Q Consensus 234 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~-~~~~~ 308 (463)
|+.+.- +.+.....++---. .+...++++-||+|.| |+.+-|+|.+.+--.++..+..+... . ...+.
T Consensus 220 YQGfAS--GD~~~DawAiR~fV----~~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN 292 (410)
T KOG1412|consen 220 YQGFAS--GDLDADAWAIRYFV----EQGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN 292 (410)
T ss_pred hccccc--CCccccHHHHHHHH----hcCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHHHHHHHHHHhhccCC
Confidence 999754 22222332221111 2223589999999999 99999999885543466666655432 2 23567
Q ss_pred CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CC-cccccCCceeEEeeeccCChhhHH
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC--RN-VVCNFTEGAMYSFPQIRLPPKAIE 385 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--pg-~~~~~~~g~~~~~~~~~~~~~~~~ 385 (463)
++.....++...|+.+ +..++|...++.+..++++.|..|++.|..+ || |.-+.-+.|+|.+-.+.
T Consensus 293 PPAyGArIV~kvL~tP----~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt------- 361 (410)
T KOG1412|consen 293 PPAYGARIVHKVLSTP----ELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLT------- 361 (410)
T ss_pred CcchhhHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCC-------
Confidence 7788888999999864 4666777778889999999999999999886 65 66667788999984333
Q ss_pred HHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 041151 386 AAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 386 ~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~ 451 (463)
...+..+.++++|++.+ .| ||+++ .+...++...++|.+.++...
T Consensus 362 ----------p~qV~~li~~h~vyLl~-------~G----RInisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 362 ----------PAQVDHLIENHKVYLLS-------DG----RINISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred ----------HHHHHHHHHhceEEEec-------CC----cEeeeccccccHHHHHHHHHHHHHhhc
Confidence 23467888999999987 34 99999 888999999999998887653
No 221
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=8.6e-18 Score=167.53 Aligned_cols=207 Identities=12% Similarity=0.136 Sum_probs=143.3
Q ss_pred CccCCCCCC---HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC-----------
Q 041151 101 GAYSDSRGI---PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH----------- 163 (463)
Q Consensus 101 ~~Y~~~~g~---~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g----------- 163 (463)
..|+. .|. ..|++++|++.+ .+++++++|+++|+..++.+++ ++||+|+++ ++
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all-~~GD~Vl~~~~~y~~t~~~~~~~~~ 111 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFV-KAGDHVLMVDSAYEPTRYFCDIVLK 111 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHHHH
Confidence 44663 344 589999998864 4689999999999999999998 999999986 22
Q ss_pred ---ceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 164 ---TTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 164 ---~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
+++...+ .-+. +.+++.+++ ++|+|++++|+||+|.. .++++|+++|+++|+++|+|++|+.....
T Consensus 112 ~~gi~v~~~d-~~~~-e~l~~~i~~------~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~ 180 (377)
T TIGR01324 112 RMGVDITYYD-PLIG-EDIATLIQP------NTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF 180 (377)
T ss_pred hcCcEEEEEC-CCCH-HHHHHhcCC------CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc
Confidence 2210000 1133 677777776 89999999999999877 46889999999999999999999864331
Q ss_pred CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHH
Q 041151 241 DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGL 319 (463)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~ 319 (463)
. ++ . .+-.|+++|++|+++|.++...|+++ ++++.++.+..... .+...++.....+..
T Consensus 181 --~---pl-~-----------~gaDivv~S~tK~l~G~~d~~gG~v~---~~~~~~~~l~~~~~~~G~~l~p~~a~~~~r 240 (377)
T TIGR01324 181 --K---PL-E-----------HGVDISIQAGTKYLVGHSDIMIGTVV---ANARTWDQLREHSYLMGQMVDADDAYTTLR 240 (377)
T ss_pred --C---cc-c-----------cCceEEEecCceeccCCCCceEEEEE---eCHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 1 11 1 12348999999999666678899888 57777777765443 333334433322322
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 320 MVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
.+ +.+.-+.++..++...+.+.|++.|.+
T Consensus 241 gl--------------~tl~~R~~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 241 GL--------------RTLGVRLKQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred hh--------------hhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 22 223334556677777788888876554
No 222
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.81 E-value=8.9e-18 Score=170.21 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=114.4
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cC
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FH 163 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g 163 (463)
..|+.+. ..+|++.+|++++ .+..++++++++++..++.+++ ++||+|+++ .|
T Consensus 52 sr~~~p~-~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 52 SRLMNPT-TDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLA-QAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred ECCCChh-HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3444433 5788888888874 2567888888999999999998 899999986 23
Q ss_pred cee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 164 TTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 164 ~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
+++ ..+. .|+ +.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+
T Consensus 122 ~~v~~v~~--~d~-~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~--- 186 (418)
T TIGR01326 122 IEVRFVDP--DDP-EEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL--- 186 (418)
T ss_pred cEEEEECC--CCH-HHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc---
Confidence 333 1111 277 999999877 7999999999999999987 67888889999999999999974322
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
..++ . .+..|++.|+||++ +.+|+|+||+++
T Consensus 187 --~~~l-----------~-~g~Divv~S~sK~l-~g~G~~lGg~v~ 217 (418)
T TIGR01326 187 --CRPI-----------D-HGADIVVHSATKYI-GGHGTAIGGVIV 217 (418)
T ss_pred --CCch-----------h-cCCeEEEECccccc-cCCccceEEEEE
Confidence 1111 1 12468999999999 889999999996
No 223
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.81 E-value=1e-17 Score=167.26 Aligned_cols=177 Identities=15% Similarity=0.243 Sum_probs=129.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv 160 (463)
++..++++.+.+.+ . .+ .|..++++++++++.+.. ..+++++|+|+++++..++.++ + +|||+|++
T Consensus 10 ~~~e~~a~~~~~~~---~--~~---~~~g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~-~pGd~Viv 76 (376)
T TIGR02379 10 TGQELEYIAEAISE---G--KL---SGDGPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDI-QPGDEVIM 76 (376)
T ss_pred CHHHHHHHHHHHHc---C--Cc---cCCcHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCC-CCcCEEEE
Confidence 67778888887765 1 12 122356777777776653 4578999999999999999987 6 89999999
Q ss_pred c-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 161 L-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 161 p-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
| .|+++ ..+.+.+|+ +.+++.+++ ++|+|+ |+||+|...+ +++|.++|+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~-~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la~ 143 (376)
T TIGR02379 77 PSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDE-TLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALAN 143 (376)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCH-HHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHHH
Confidence 8 67666 334578999 999999887 799986 6778999887 667888889
Q ss_pred hCCeEEEecccccccc-cCCCCCccchHHHHHhcCCCCCCCceEEEEecC--CcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 223 QENLVLLGDEVYQQNI-YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTV--SKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
++|++||+|++|+.+. | ++.+..++ . .+.+.|| +|.+ . +|.++|++++ .++++.+++
T Consensus 144 ~~~i~vIeDaa~~~g~~~-~~~~~g~~-----------~----~~~~fSf~~~K~l-~-~g~~gG~v~~--~~~~~~~~~ 203 (376)
T TIGR02379 144 KHQLFVIEDAAQGVMSTY-KGRALGSI-----------G----HLGTFSFHETKNY-T-SGGEGGALLI--NDQAFIERA 203 (376)
T ss_pred HCCCEEEEECccccCCcc-CCcccCCC-----------C----CEEEEeCCCCCcC-c-ccCCceEEEE--CCHHHHHHH
Confidence 9999999999998764 4 22222221 1 1223333 2777 3 6778999987 578899998
Q ss_pred Hhhhh
Q 041151 300 YKIAS 304 (463)
Q Consensus 300 ~~~~~ 304 (463)
+.++.
T Consensus 204 ~~~~~ 208 (376)
T TIGR02379 204 EIIRE 208 (376)
T ss_pred HHHHH
Confidence 87764
No 224
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=1.7e-17 Score=165.92 Aligned_cols=278 Identities=11% Similarity=0.126 Sum_probs=174.9
Q ss_pred CccCCCCC--CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c-------------
Q 041151 101 GAYSDSRG--IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F------------- 162 (463)
Q Consensus 101 ~~Y~~~~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~------------- 162 (463)
..|+...+ ..+|++.++++++ .++++++++++.++..++. ++ ++||+|+++ +
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~g--------~~~~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLDK--------ADRAFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHH
Confidence 45664311 3455566665543 2566666767789988776 66 899999996 2
Q ss_pred -Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 163 -HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 163 -g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
|+++ ..+ ..|+ +.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 109 ~G~~v~~vd--~~d~-~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~- 175 (378)
T TIGR01329 109 SGVVVVHVD--TTDL-DKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL- 175 (378)
T ss_pred cCcEEEEeC--CCCH-HHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 4444 111 1378 999999876 8999999999999999987 88888899999999999999864321
Q ss_pred CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHH
Q 041151 241 DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGL 319 (463)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~ 319 (463)
..++ .+ . -.++++|++|+++|..+++.|++++ .++++.+++...+. ...+.++.....+..
T Consensus 176 ----~~~l-~~--------g---~Di~v~S~tK~l~G~~~~~~G~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~ 237 (378)
T TIGR01329 176 ----CNPL-EL--------G---ADIVYHSATKFLAGHSDVMAGVLAV--KGEEIAKKVYFLQNSTGSGLAPFDCWLLLR 237 (378)
T ss_pred ----CChh-hc--------C---CcEEEEecceeccCCccceeEEEEe--CcHHHHHHHHHHHHhcCCcCCHHHHHHHHc
Confidence 1122 11 1 1389999999986556688999986 46666677776655 334444443333222
Q ss_pred hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-cc-----------------CCceeEEeeeccCCh
Q 041151 320 MVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC-NF-----------------TEGAMYSFPQIRLPP 381 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~-----------------~~g~~~~~~~~~~~~ 381 (463)
.++ .+..+.++-.++...+.+.|++.|.+.. .. ..|+++.+ .+ .
T Consensus 238 ~l~--------------tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf---~~-~ 299 (378)
T TIGR01329 238 GIK--------------TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSF---ET-G 299 (378)
T ss_pred cCC--------------CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEE---EE-C
Confidence 222 2223344456666666667766544321 11 12334433 33 1
Q ss_pred hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC------------C------C--CCcEEEEEecCCcCcHHHHHH
Q 041151 382 KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ------------K------E--GIFHLRTTILPAEEDMPAIME 441 (463)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~------------~------~--~~~~lRis~~~~~e~i~~~~~ 441 (463)
+. ....+++ ..|+..++.++.|..... . . ..+.+|||++. |+.+.+++
T Consensus 300 ~~---------~~~~~~~-~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~ 367 (378)
T TIGR01329 300 SV---------ALSKRLV-EATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLIS 367 (378)
T ss_pred CH---------HHHHHHH-HhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHH
Confidence 11 0123443 445777787877765431 0 0 13589999996 47888888
Q ss_pred HHHHHHHH
Q 041151 442 SFKKFNDE 449 (463)
Q Consensus 442 ~l~~~l~~ 449 (463)
.|.+++++
T Consensus 368 dl~~al~~ 375 (378)
T TIGR01329 368 DLDIAFVT 375 (378)
T ss_pred HHHHHHHh
Confidence 88888864
No 225
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=6.4e-18 Score=156.80 Aligned_cols=368 Identities=13% Similarity=0.131 Sum_probs=253.2
Q ss_pred hhhhhhhhhccchhhhhHHHHHHHHHHhc-ccceeccCCC-CcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHH
Q 041151 9 ESMNENVKKVQYAVRGELYLRASELQKEG-KKIIFTNVGN-PHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAI 86 (463)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~G~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 86 (463)
+..+.++..++..+...|.+....++++. ..-|||++|. -+..|.+. + -+.+.
T Consensus 22 ~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~---------------------v----L~~Vr 76 (427)
T KOG1411|consen 22 ARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPY---------------------V----LPSVR 76 (427)
T ss_pred ccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCee---------------------e----eHHHH
Confidence 34444555555555556666666666653 4479999995 33322211 1 34565
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEc--CCcHHHHHHHHHHHhc-CCCCEEEEc--
Q 041151 87 ARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLT--DGASKGVMQTLNCVIR-GEGDGVVLL-- 161 (463)
Q Consensus 87 ~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t--~G~~~al~~~~~~l~~-~~gd~Vlvp-- 161 (463)
+|-.+.+.. .....|-|..|.+++.+..+++.-....-.+..++|+.+ -+++.++......+.+ -++..|.+|
T Consensus 77 kAE~ql~~~--~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~P 154 (427)
T KOG1411|consen 77 KAEQQLASL--SLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDP 154 (427)
T ss_pred HHHHHHhhh--cccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCC
Confidence 555554442 355799999999999999999974321112344455543 3556666655554431 578888887
Q ss_pred -----------cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE--CCCCCCccCCCHHHHHHHHHHhh
Q 041151 162 -----------FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVII--NPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 162 -----------~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~--~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
+|..+ .....++|+ +.+.+.+.+. ....+++. ..|||||+-.+.|++++|.++.+
T Consensus 155 TWgNh~~if~~ag~~~~~yrYyd~~t~gld~-~g~ledl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~ 228 (427)
T KOG1411|consen 155 TWGNHKNIFKDAGLPVKFYRYYDPKTRGLDF-KGMLEDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEKISDLIK 228 (427)
T ss_pred cccccCccccccCcceeeeeeccccccccch-HHHHHHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhh
Confidence 44444 445678899 8888877764 23344444 66999999999999999999999
Q ss_pred hCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh-
Q 041151 223 QENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK- 301 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~- 301 (463)
+.+.+.+.|.+|+.|.-+ ........+---. .+..+++++-||.|.+ |+.|-|+|.+.+.+.+++...++..
T Consensus 229 ~k~~~pffDmAYQGfaSG--~~d~DA~avR~F~----~~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ad~A~rV~SQ 301 (427)
T KOG1411|consen 229 EKNLLPFFDMAYQGFASG--DLDKDAQAVRLFV----EDGHEILLAQSYAKNM-GLYGERVGALSVVCKDADEAKRVESQ 301 (427)
T ss_pred hccccchhhhhhcccccC--CchhhHHHHHHHH----HcCCceEeehhhhhhc-chhhhccceeEEEecCHHHHHHHHHH
Confidence 999999999999987542 1111221110011 2334789999999999 9999999999665567766666543
Q ss_pred ---h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CC-cccccCCceeEEe
Q 041151 302 ---I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC--RN-VVCNFTEGAMYSF 374 (463)
Q Consensus 302 ---~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--pg-~~~~~~~g~~~~~ 374 (463)
+ +...++++.....++..+|+++ ..+.+|..+.+.+..++...|..|.+.|+.. ++ |..+..+-|+|.+
T Consensus 302 lk~liRpmYSnPP~hGArIv~~Il~d~----~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~f 377 (427)
T KOG1411|consen 302 LKILIRPMYSNPPLHGARIVATILSDP----DLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCF 377 (427)
T ss_pred HHHHhcccccCCCccchhhhhhccCCh----HHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeee
Confidence 2 2356777777888888888754 5677888889999999999999999999874 33 5556778899998
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHH
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~ 448 (463)
-.+. .+.+..+.+++.|++.. .| |||++ .+...+..+.++|.++.+
T Consensus 378 Tgl~-----------------peQv~~l~ke~~iYmT~-------dG----RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 378 TGLN-----------------PEQVDWLTKEYHIYLTK-------DG----RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred cCCC-----------------HHHHHHHHhhheeeecc-------Cc----eEeeccccccCCcccchhhHhHhc
Confidence 4332 33467788899998854 23 99999 777888888888877654
No 226
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=7.6e-18 Score=167.51 Aligned_cols=289 Identities=11% Similarity=0.101 Sum_probs=181.6
Q ss_pred HHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEEc----
Q 041151 87 ARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVLL---- 161 (463)
Q Consensus 87 ~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlvp---- 161 (463)
+++.+.+.+ .. |.......++++.++++++ .+++++++|+++++..++.++ . .+||+|+++
T Consensus 3 ~~~~~~~~~---~~--~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~-~~gd~vl~~~~~~ 68 (352)
T cd00616 3 EAVEEVLDS---GW--LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGI-GPGDEVIVPSFTF 68 (352)
T ss_pred HHHHHHHHc---CC--ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCC-CCCCEEEeCCcch
Confidence 345555554 22 2223356899999999985 356788888899999999998 5 799999998
Q ss_pred ---------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeE
Q 041151 162 ---------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLV 227 (463)
Q Consensus 162 ---------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ 227 (463)
.|.++ ....+.+|+ +.+++.+++ ++++|++++ |+|...+ +++|.++|++++++
T Consensus 69 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~-~~l~~~i~~------~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~ 135 (352)
T cd00616 69 VATANAILLLGATPVFVDIDPDTYNIDP-ELIEAAITP------RTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLP 135 (352)
T ss_pred HHHHHHHHHcCCeEEEEecCCCcCCcCH-HHHHHhcCc------CCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCe
Confidence 56665 222678899 999998865 799998764 6898876 66777788899999
Q ss_pred EEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC--cccCCCCCceeEEEEecCCChhHHHHHHhhhhh
Q 041151 228 LLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS--KGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI 305 (463)
Q Consensus 228 vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~ 305 (463)
+|+|++|+......+. .+ +.. ..+.+.|++ |.+ + +.+.|++++ .++++.+++......
T Consensus 136 li~D~a~~~g~~~~~~---~~-----------~~~-~d~~~~S~~~~K~~-~--~~~gg~~~~--~~~~~~~~~~~~~~~ 195 (352)
T cd00616 136 VIEDAAQALGATYKGR---KV-----------GTF-GDAGAFSFHPTKNL-T--TGEGGAVVT--NDEELAERARLLRNH 195 (352)
T ss_pred EEEECCCCCCCeECCE---Ec-----------ccC-cceeEEcCCCCCCC-c--ccCceEEEE--CCHHHHHHHHHHHHc
Confidence 9999999854321111 11 111 125667766 877 3 445788875 456888877655321
Q ss_pred ccc-------------CChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCc---
Q 041151 306 ALS-------------PNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEG--- 369 (463)
Q Consensus 306 ~~~-------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g--- 369 (463)
... ...+....++..+ ..+..+++..++.+++.+++.+.|.+++|+++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~~-----------~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~ 264 (352)
T cd00616 196 GRDRDRFKYEHEILGYNYRLSEIQAAIGL-----------AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVK 264 (352)
T ss_pred CCCCCCCccccceeeeccCcCHHHHHHHH-----------HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCc
Confidence 100 0111121111111 0123345566777888999999999988888764322
Q ss_pred -e-eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC---------------C-----CCcEEEE
Q 041151 370 -A-MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK---------------E-----GIFHLRT 427 (463)
Q Consensus 370 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~---------------~-----~~~~lRi 427 (463)
. +.+.+.++...+ . +.+.+.+.|.++||.+......... + ..+.+|+
T Consensus 265 ~~~~~~~~~~~~~~~----------~-~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l 333 (352)
T cd00616 265 HSYHLYVIRLDPEAG----------E-SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSL 333 (352)
T ss_pred eeeEEEEEEECCcCC----------C-CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEc
Confidence 1 222222221001 1 2333456678889976532111000 0 0257999
Q ss_pred Eec--CCcCcHHHHHHHHH
Q 041151 428 TIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 428 s~~--~~~e~i~~~~~~l~ 444 (463)
++. .+++|++.++++|+
T Consensus 334 ~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 334 PLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred cCCCCCCHHHHHHHHHHhC
Confidence 999 89999999988774
No 227
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=1.1e-16 Score=161.09 Aligned_cols=315 Identities=12% Similarity=0.057 Sum_probs=201.6
Q ss_pred cHHHHHHHHHHhhhc-C---CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC---
Q 041151 82 PADAIARAKHYLSLT-S---GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE--- 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~-~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~--- 154 (463)
++.+.+++...+.+. . +....|+..+...++.....+...+.+|.. -.+|..-+| ++|...++.+++ +|
T Consensus 62 s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~Sg-~~An~~v~~all-~~~~~ 137 (493)
T PRK13580 62 SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHSG-ADANLVAFWAIL-AHKVE 137 (493)
T ss_pred CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCCc-HHHHHHHHHHHh-ccccc
Confidence 677888876665542 1 012234444444556655556666665533 346666666 668888999998 66
Q ss_pred ----------------------------CCEEEEc---cCcee--------------------cCCCcccChHHHHHHHH
Q 041151 155 ----------------------------GDGVVLL---FHTTW--------------------KRQQIGVLIINDLQQSV 183 (463)
Q Consensus 155 ----------------------------gd~Vlvp---~g~~~--------------------~~~~~~~d~~~~l~~~l 183 (463)
||+|+.. .|+++ ......+|. +.+++.+
T Consensus 138 ~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~-d~l~~~~ 216 (493)
T PRK13580 138 SPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDY-DEIAALA 216 (493)
T ss_pred CcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCH-HHHHHHH
Confidence 7888874 44432 223467999 9999999
Q ss_pred HHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCc
Q 041151 184 AQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEV 263 (463)
Q Consensus 184 ~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (463)
.+ +++.|+++..+|- |...+ +++|.++|+++|+++++|++|....++.+. .. ....+ . . .
T Consensus 217 ~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~-~~--~~~~~-~----~--~ 276 (493)
T PRK13580 217 RE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV-FT--GDEDP-V----P--H 276 (493)
T ss_pred hh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceecccc-ch--hhcCC-C----C--C
Confidence 88 7788888877776 44656 777777888999999999999987763111 10 00000 0 1 1
Q ss_pred eEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh-cccCChHHHHHHHHhcCCCCCCCchHHHHH-HHHHHH
Q 041151 264 QLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI-ALSPNVPAQIFMGLMVNPLKPGDISYEQFV-RESKGI 341 (463)
Q Consensus 264 ~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~ 341 (463)
..|+++|++|+|. |-+.|+++ +++++++.+.+..+. ..++..+...+++..+. ... .+.+..
T Consensus 277 ~D~vtgT~hKaL~---GP~GG~I~---~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~----------e~~~~ef~~y 340 (493)
T PRK13580 277 ADIVTTTTHKTLR---GPRGGLVL---AKKEYADAVDKGCPLVLGGPLPHVMAAKAVALA----------EARTPEFQKY 340 (493)
T ss_pred CcEEEeCChhhcc---CCCeEEEE---ecHHHHHHHhhCCCcccCCCccHHHHHHHHHHH----------HHhCccHHHH
Confidence 3488999999883 55579988 488888888544442 22333332222222221 111 112346
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccC-CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNVVCNFT-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE 420 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 420 (463)
++++.++.+.|.+.|.+. |+.+... ..+..+++++.-.. .....+.+.|.+.||.+.+-.....+.
T Consensus 341 ~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~------------~~g~~a~~~L~e~GI~vn~i~~Ptvp~ 407 (493)
T PRK13580 341 AQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG------------LTGRQAESALLDAGIVTNRNSIPSDPN 407 (493)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH------------HHHHHHHHHHHHCCeEEccccCCCCCC
Confidence 778999999999999988 8887532 22345555554111 023345668899999998755554444
Q ss_pred C---CcEEEEEecC------CcCcHHHHHHHHHHHHHHH
Q 041151 421 G---IFHLRTTILP------AEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 421 ~---~~~lRis~~~------~~e~i~~~~~~l~~~l~~~ 450 (463)
+ ...|||++.. +++|++++++.|.++++..
T Consensus 408 g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 408 GAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 4 4579999882 4789999999999888754
No 228
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=5.7e-17 Score=164.58 Aligned_cols=211 Identities=16% Similarity=0.221 Sum_probs=142.6
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------C
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------H 163 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g 163 (463)
..|+.. |.+ .++++++++.+.. ..+.+++++|+++++..++ .++ ++||+|+++ + |
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~G 196 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLI-KNGEEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHh-CCCCEEEEcCCchhhHHHHHHHHHHHCC
Confidence 567665 554 6777777776653 3567777788888987666 466 899999997 2 3
Q ss_pred ceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCC
Q 041151 164 TTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDER 243 (463)
Q Consensus 164 ~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~ 243 (463)
+++. .....|+ +.+++++++ ++|+|++++|+||||.+ .++++|+++|+++|++||+|++|+..... .
T Consensus 197 ~~v~-~vd~~d~-e~l~~ai~~------~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~--~ 263 (464)
T PLN02509 197 VVVK-RVNTTNL-DEVAAAIGP------QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS--R 263 (464)
T ss_pred eEEE-EeCCCCH-HHHHHhCCc------CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC--C
Confidence 3331 1112467 899988876 79999999999999986 56899999999999999999998754331 1
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh-cccCChHHHHHHHHhcC
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI-ALSPNVPAQIFMGLMVN 322 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~ 322 (463)
++ . . . -.+++.|++|++.|..+.-.|++++ .++.+.+.+...+.. ....++.. +...+.
T Consensus 264 ---pl-~----~----g---aDivv~S~tK~l~G~gdv~gG~v~~--~~~~l~~~~~~~~~~~g~~l~p~~---A~l~lr 323 (464)
T PLN02509 264 ---PL-E----L----G---ADIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQNSEGSGLAPFD---CWLCLR 323 (464)
T ss_pred ---hh-h----c----C---CcEEEecCcccccCCCccceeEEEe--ccHHHHHHHHHHHHhcCCCcCHHH---HHHHHh
Confidence 11 1 1 1 2489999999984434455788875 355566665544432 22223332 222222
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 323 PLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.++.+..+.++..+++..+.+.|++.|.++
T Consensus 324 -----------~L~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 324 -----------GIKTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred -----------hhhhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 233445567778888899999999887653
No 229
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=2.1e-17 Score=165.69 Aligned_cols=176 Identities=15% Similarity=0.188 Sum_probs=130.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv 160 (463)
++..++++.+.+.+ ....+++ ...+|++++|++++ .+.++.++|+++++.+++.++ + ++||+|++
T Consensus 13 ~~~e~~~~~~~l~~---~~~~~g~--~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~-~~Gd~Viv 78 (379)
T PRK11658 13 GDEELAAVKEVLRS---GWITTGP--KNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGI-GPGDEVIT 78 (379)
T ss_pred CHHHHHHHHHHHHc---CCccCCH--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCC-CCCCEEEE
Confidence 67778888887765 2223333 46899999999985 246788899999999999998 6 89999999
Q ss_pred c-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 161 L-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 161 p-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
| .|+++ ..+.+.+|+ +.+++++++ ++|+|+ |+||+|...+ +++|.++|+
T Consensus 79 ~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~-~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~ 145 (379)
T PRK11658 79 PSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTP-EAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGE 145 (379)
T ss_pred CCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCH-HHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHH
Confidence 7 66666 234567899 999999987 799987 6667999876 677888899
Q ss_pred hCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh
Q 041151 223 QENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI 302 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 302 (463)
++|++||+|++|+......+... ...+ +.+.||++.. .+++.+.|++++ .++++.++++..
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~~~--------------g~~g--~~~~Sf~~~K-~l~~g~GG~v~~--~~~~~~~~~~~~ 206 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGRHI--------------GARG--TAIFSFHAIK-NITCAEGGLVVT--DDDELADRLRSL 206 (379)
T ss_pred HcCCeEEEECCCccCCeECCeec--------------CCCC--CEEEeCCCCC-cCcccCceEEEE--CCHHHHHHHHHH
Confidence 99999999999985322122111 1111 2456777555 557788999886 468888888765
Q ss_pred h
Q 041151 303 A 303 (463)
Q Consensus 303 ~ 303 (463)
.
T Consensus 207 ~ 207 (379)
T PRK11658 207 K 207 (379)
T ss_pred H
Confidence 4
No 230
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=2.7e-17 Score=164.28 Aligned_cols=199 Identities=11% Similarity=0.170 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~~~ 170 (463)
...|++.+|++.+ . ...+++++| +.++..++ .++ +|||+|+++ + |+++ ..
T Consensus 52 ~~~Le~~lA~l~g------~-~~~~~~~sG-~aai~~~~-~~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v-- 119 (377)
T PRK07671 52 RAALEELIAVLEG------G-HAGFAFGSG-MAAITAVM-MLF-SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV-- 119 (377)
T ss_pred HHHHHHHHHHHhC------C-CceEEeCCH-HHHHHHHH-HHh-CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE--
Confidence 5688888888875 2 235666665 66787765 466 899999997 2 2333 11
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
...|+ +.+++++++ ++++|++++|+||||.+.+ +++|.++|+++++++|+|++|....+ . . ++ .
T Consensus 120 ~~~d~-~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~-~-~---p~-~ 183 (377)
T PRK07671 120 DTSNL-EEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYW-Q-S---PI-S 183 (377)
T ss_pred CCCCH-HHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCcccc-C-C---hh-h
Confidence 12378 999999887 8999999999999999866 77777788899999999999976433 1 1 11 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh-cccCChHHHHHHHHhcCCCCCCCc
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI-ALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
+ . ..|++.|+||++.|..+.-.|++++ .++++++++...+.. ....+......+..-+
T Consensus 184 ~--------g---~Divv~S~sK~l~G~~~~~~G~~v~--~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l-------- 242 (377)
T PRK07671 184 L--------G---ADIVLHSATKYLGGHSDVVAGLVVV--NSPELAEDLHFVQNSTGGILGPQDSWLLLRGL-------- 242 (377)
T ss_pred h--------C---CeEEEecCcccccCCccceeEEEEe--CcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc--------
Confidence 1 1 2489999999994344456777775 567888888877762 3333343333222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+.+..+.++..++...+.+.|++.|++
T Consensus 243 ------~tl~~R~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 243 ------KTLGIRMEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred ------ChHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 123335556678888899999887665
No 231
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=5.3e-17 Score=165.31 Aligned_cols=319 Identities=12% Similarity=0.054 Sum_probs=191.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+.+. ..++......+.+.++|+.+.+..+ ..-+.+++++++++|+..+++....-.| ..|+.
T Consensus 59 ~p~v~~Ai~~ql~~~----~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~ 132 (443)
T PRK08360 59 NPRVVKAIKEQTDKL----IHYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILS 132 (443)
T ss_pred CHHHHHHHHHHHHhc----cCccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEE
Confidence 778999998888762 1222222223555667777654422 1125899999999999999986531123 34444
Q ss_pred c----cCcee-----------------c---------CCC----cc--------cChHHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW-----------------K---------RQQ----IG--------VLIINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~-----------------~---------~~~----~~--------~d~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
- +|... + .+. +. .++ +.+++.+.... .+.++.+|++
T Consensus 133 ~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-~~~~iAAvi~ 210 (443)
T PRK08360 133 YLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV-EYIKEKFEGEV-YAEGVAALFA 210 (443)
T ss_pred EeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH-HHHHHHHHhcc-CCCCeEEEEE
Confidence 2 33221 0 000 00 112 44555554310 1236888877
Q ss_pred ECCCCCCccCCC-HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 199 INPGNPTGQCLS-EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 199 ~~p~NPtG~~~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
.--+||+|.+++ .+.+++|.++|++||+++|+||+|..+.+. +. ....... ++ ..+ + .++||++ +
T Consensus 211 eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~-G~-~~a~~~~--~~----~pD--i---itlsK~l-~ 276 (443)
T PRK08360 211 EPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRT-GK-WFAIEHF--GV----EPD--I---ITLGKPL-G 276 (443)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-cc-chhhhhc--CC----CCC--E---EEecccc-c
Confidence 754799999887 557999999999999999999999986542 22 1111111 11 221 2 3679999 6
Q ss_pred CCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 278 ECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 278 ~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
+|+|+||++ +++++++.+..... .+++.+++.+.++.+.|+ .+++ +.+.++.+++-+++.+.|
T Consensus 277 -~G~pigav~---~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~-----------~l~~-~~l~~~~~~~g~~l~~~L 340 (443)
T PRK08360 277 -GGLPISATI---GRAEIMDSLPPLAHAFTLSGNPVASAAALAVIE-----------EIEE-KNLLKRAEKLGNYTKKRL 340 (443)
T ss_pred -CCceeEEEE---EcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHH-----------HHHH-cCHHHHHHHHHHHHHHHH
Confidence 899999999 58889888865533 567788888888888874 2221 134555556656666666
Q ss_pred hc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 357 NS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 357 ~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
++ .|-+.-+...|-+ +-+.+..+... ..........+...+.++||.+.+.. ...+|++.+
T Consensus 341 ~~l~~~~~~v~~vrg~Gl~-~gie~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lr~~P~l~ 407 (443)
T PRK08360 341 EEMKKKHELIGDVRGIGLM-IGVDLVKDRET-----KERAYEEAAKVVWRAWELGLIVTFFS-------GNVLRIQPPLT 407 (443)
T ss_pred HHHHHhCCCeeeeeccceE-EEEEEecCCcc-----cCccHHHHHHHHHHHHHCCeEEeecC-------CCEEEEeCCCC
Confidence 54 3322223344433 33222111000 00000012233455778899986521 136999777
Q ss_pred CCcCcHHHHHHHHHHHHHHHH
Q 041151 431 PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 431 ~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.+++++++++++|.++++.+.
T Consensus 408 ~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 408 IEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998763
No 232
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=4.4e-17 Score=163.77 Aligned_cols=302 Identities=14% Similarity=0.131 Sum_probs=187.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv 160 (463)
++..++++.+.+.+ .. |.......++|++++++++ . +..++++|+++++..++.++ + ++||+|++
T Consensus 9 ~~~~~~~v~~~~~~---~~--~~~g~~~~~le~~la~~~g------~--~~~v~~~sgt~al~~~l~al~~-~~Gd~Viv 74 (380)
T TIGR03588 9 DQDDIDAVVEVLKS---DF--LTQGPTVPAFEEALAEYVG------A--KYAVAFNSATSALHIACLALGV-GPGDRVWT 74 (380)
T ss_pred CHHHHHHHHHHHhc---CC--ccCChhHHHHHHHHHHHHC------C--CeEEEEcCHHHHHHHHHHHcCC-CCCCEEEe
Confidence 66778888877765 22 3333456899999999985 2 34556667899999999998 6 89999999
Q ss_pred c-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 161 L-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 161 p-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
| .|+++ ..+.+.+|+ +.+++.+++. ..+++++|+++ |++|...+ +++|.++|+
T Consensus 75 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~-~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~ 145 (380)
T TIGR03588 75 TPITFVATANCALYCGAKVDFVDIDPDTGNIDE-DALEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAK 145 (380)
T ss_pred CCcchHHHHHHHHHcCCEEEEEecCCCcCCcCH-HHHHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHH
Confidence 7 57666 234677999 9999999821 00178998854 46888765 777888899
Q ss_pred hCCeEEEecccccccc-cCCCCCccchHHHHHhcCCCCCCCceEEEEecCC--cccCCCCCceeEEEEecCCChhHHHHH
Q 041151 223 QENLVLLGDEVYQQNI-YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS--KGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
++|++||+|++|+... + ++.+..+. .+ . .+.+.|++ |.+ +. | ..|++++ .++++.+++
T Consensus 146 ~~~~~lI~D~a~a~g~~~-~~~~~g~~-----~~----~----d~~~~S~~~~K~~-~~-~-~GG~v~~--~~~~~~~~~ 206 (380)
T TIGR03588 146 KHGLKIIEDASHALGAEY-GGKPVGNC-----RY----A----DATVFSFHPVKII-TT-A-EGGAVTT--NDEELAERM 206 (380)
T ss_pred HcCCEEEEECCCcccCcc-CCEeCCCc-----cc----c----ceEEEecCCCCcc-cc-c-CceEEEE--CCHHHHHHH
Confidence 9999999999998642 3 22221110 01 1 26677776 877 43 2 5788876 578888887
Q ss_pred HhhhhhcccCC-----------------------hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 300 YKIASIALSPN-----------------------VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 300 ~~~~~~~~~~~-----------------------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
+.......... .+....++..+ ..++.++++.++-+++.+++.+.|
T Consensus 207 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~-----------~qL~~l~~~~~~r~~~~~~~~~~L 275 (380)
T TIGR03588 207 RLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGL-----------SQLKKLDRFVAKRREIAARYDRLL 275 (380)
T ss_pred HHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66543111110 00111111111 012334556666777788899999
Q ss_pred hcCCCcccccC-C---ceeEE-eeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCC-----------CCC-
Q 041151 357 NSCRNVVCNFT-E---GAMYS-FPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGF-----------GQK- 419 (463)
Q Consensus 357 ~~~pg~~~~~~-~---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f-----------~~~- 419 (463)
.++|++.+..+ . .+++. .+.+....+ .+.+.+.+.|+++||.++..... ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~ 344 (380)
T TIGR03588 276 KDLPYFTPLTIPLGSKSAWHLYPILLDQEFG-----------CTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGD 344 (380)
T ss_pred cCCCCccCCCCCCCCEeEEEEEEEEECCcCC-----------CCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCC
Confidence 88877664433 1 12222 222221011 02333455678899988743211 000
Q ss_pred -C-----CCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 420 -E-----GIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 420 -~-----~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
+ ....+++.+. .+++|++..++.|++++
T Consensus 345 ~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 345 LPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 0 0146788777 78899999999998764
No 233
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=5.8e-17 Score=164.15 Aligned_cols=141 Identities=13% Similarity=0.172 Sum_probs=109.3
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~~~ 170 (463)
...|.+.+|++.+ .+..++++|+++++..++..++ ++||+|+++ + |+++ .-+
T Consensus 66 ~~~Le~~lA~leg--------~~~al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd- 135 (431)
T PRK08248 66 TDVFEKRIAALEG--------GIGALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD- 135 (431)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC-
Confidence 4678888888763 4577888888999999999988 899999997 2 3333 111
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
..|+ +.+++++++ ++++|++++|+||||.+++ +++|+++|++++++||+|++|+... ...++ .
T Consensus 136 -~~d~-e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~-----~~~pl-~ 198 (431)
T PRK08248 136 -PSDP-ENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY-----LLRPI-E 198 (431)
T ss_pred -CCCH-HHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc-----cCChh-H
Confidence 1377 999998876 7999999999999999998 5678888889999999999986321 11111 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+ +..+++.|++|++ |.+|.++|.+++
T Consensus 199 ----~-------gaDivv~S~tK~l-gg~g~~~Gg~v~ 224 (431)
T PRK08248 199 ----H-------GADIVVHSATKFI-GGHGTSIGGVIV 224 (431)
T ss_pred ----c-------CCCEEEEcCcccc-CCCCCceEEEEE
Confidence 1 2348889999999 889999999886
No 234
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.4e-17 Score=167.05 Aligned_cols=320 Identities=12% Similarity=0.076 Sum_probs=188.6
Q ss_pred cHHHHHHHHHHhhhcCCCC-CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGL-GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 159 (463)
++.+.+++.+++....... ..| ..+....+++.+.+... -..+.+++++++++|+..+++.... .....|+
T Consensus 61 ~p~v~~a~~~q~~~~~~~~~~~~-----~~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii 133 (433)
T PRK08117 61 HPKVVQAIKEQADKLMHGPSGVI-----YYESILKLAEELAEITP--GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYII 133 (433)
T ss_pred CHHHHHHHHHHHHhccCcccccc-----CCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEE
Confidence 7789999988887631111 011 12444555555544321 1235899999999999999986321 1224444
Q ss_pred Ec----cCcee-----c------CCCcc----------------------------cChHHHHHHHHHHHHhcCCceeEE
Q 041151 160 LL----FHTTW-----K------RQQIG----------------------------VLIINDLQQSVAQARSKGITVRAM 196 (463)
Q Consensus 160 vp----~g~~~-----~------~~~~~----------------------------~d~~~~l~~~l~~~~~~~~~~~~i 196 (463)
.- +|... . ...+. -++ +.+++.++... .+.++.+|
T Consensus 134 ~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~-~~~~~aav 211 (433)
T PRK08117 134 SFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL-RDLESLFKHQV-TPEEVAAV 211 (433)
T ss_pred EECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH-HHHHHHHHhcc-CCCcEEEE
Confidence 43 22111 0 00000 144 56666665311 11256666
Q ss_pred EEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCccc
Q 041151 197 VIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGY 275 (463)
Q Consensus 197 ~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 275 (463)
++.-...-.|.+ .+.+.+++|.++|++||+++|+||+|..+... +. .+.. ..+++ ..-+.|+||.+
T Consensus 212 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~-G~---~~~~--~~~gv-------~pDi~t~sK~l 278 (433)
T PRK08117 212 IIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT-GE---WFAA--QTFGV-------VPDIMTIAKGI 278 (433)
T ss_pred EECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc-cc---chhH--hhcCC-------CCCEeehhhhc
Confidence 665444445665 57888999999999999999999999975432 22 1111 12211 12347999999
Q ss_pred CCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 276 WGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTD 354 (463)
Q Consensus 276 ~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (463)
+ +|+++|+++ +++++.+.+..... .+++.+++.+.++.+.|+ .++ .+.+.++++++.+.+.+
T Consensus 279 -g-~G~pigav~---~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~-----------~l~-~~~l~~~~~~~g~~l~~ 341 (433)
T PRK08117 279 -A-SGLPLSAVV---ASKELMEQWPLGSHGTTFGGNPVACAAALATLE-----------VIK-EEKLLDNANEMGAYALE 341 (433)
T ss_pred -c-CCCcceeEE---EcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH-----------HHH-hccHHHHHHHHHHHHHH
Confidence 6 799999998 58888887754333 456778999988888874 111 12344455555556666
Q ss_pred HhhcCC---CcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 355 GFNSCR---NVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 355 ~L~~~p---g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
.|+++. ++....+..|+++.+.+..+... ........+...+.++||.+.+.. . ..+.+|++++
T Consensus 342 ~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~-------~~~~~~~~~~~~l~~~Gv~~~~~g---~--~~~~lRl~p~~ 409 (433)
T PRK08117 342 RLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGE-------PDGDAVEKILDKCLEKGLLFYLCG---N--AGNVLRMIPPL 409 (433)
T ss_pred HHHHHHhcCCceeeeecCCcEEEEEEecCCCC-------cchHHHHHHHHHHHHCCCEEeecC---C--CCCEEEEeCCc
Confidence 555431 11112233445555444322100 000123334566778899987632 1 2348999965
Q ss_pred -CCcCcHHHHHHHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.++++|++++++|.++++++.+
T Consensus 410 ~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 410 TVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999987643
No 235
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.79 E-value=9.5e-17 Score=162.83 Aligned_cols=317 Identities=13% Similarity=0.073 Sum_probs=189.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++... ....+.. ...+...++|+.+.+.... ...+.+++++++++|+..+++....-.| .+|+.
T Consensus 58 ~p~v~~ai~~ql~~~--~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~ 132 (421)
T PRK09792 58 HPDLVAAVEQQLQQF--THTAYQI--VPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIA 132 (421)
T ss_pred CHHHHHHHHHHHHhc--cCcccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEE
Confidence 778899998888763 1111111 1234445566665443211 1125899999999999999987631123 34554
Q ss_pred c----cCcee----------------------------cCCCccc----ChHHHHHHHHHHHHhcCCceeEEEEECCCCC
Q 041151 161 L----FHTTW----------------------------KRQQIGV----LIINDLQQSVAQARSKGITVRAMVIINPGNP 204 (463)
Q Consensus 161 p----~g~~~----------------------------~~~~~~~----d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NP 204 (463)
- +|... +.+..++ ++ +.+++.++... ...++.+|++.-.++|
T Consensus 133 ~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~-~~l~~~~~~~~-~~~~iaavi~EPvq~~ 210 (421)
T PRK09792 133 FSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSL-DAIERLFKSDI-EAKQVAAIIFEPVQGE 210 (421)
T ss_pred ECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHH-HHHHHHHHhcc-CCCceEEEEEccccCC
Confidence 3 22211 0000001 23 56666665310 0126788888855999
Q ss_pred CccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee
Q 041151 205 TGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG 283 (463)
Q Consensus 205 tG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 283 (463)
+|..+ +.+.+++|.++|++|++++|+||++..+.+. +.. ..... ++. .. . +.||||++ + +|+++
T Consensus 211 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~-G~~-~a~~~----~~~--~p---D--i~t~gK~l-~-~G~pi 275 (421)
T PRK09792 211 GGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFART-GKL-FAMDH----YAD--KP---D--LMTMAKSL-A-GGMPL 275 (421)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC-Cch-hHHHh----cCC--CC---c--EEEeehhh-c-CCCce
Confidence 99765 8999999999999999999999999987552 221 12211 211 11 1 58999999 5 79999
Q ss_pred EEEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh----c
Q 041151 284 GYFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN----S 358 (463)
Q Consensus 284 G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 358 (463)
||++ +++++.+.+.... ..+++.+++.+.++.+.++ ++++ .+..++.++..+.+.+.|+ +
T Consensus 276 gav~---~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~-----------~l~~-~~~~~~~~~~g~~l~~~l~~l~~~ 340 (421)
T PRK09792 276 SGVV---GNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN-----------IIDK-ESLCERANQLGQRLKNTLIDAKES 340 (421)
T ss_pred EEEE---EcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH-----------HHHh-hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 5888888775433 2577889999997777663 1111 0122222233333333332 2
Q ss_pred CCCcccccCCc-eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCc
Q 041151 359 CRNVVCNFTEG-AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEED 435 (463)
Q Consensus 359 ~pg~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~ 435 (463)
+|. +..+.| |+++|+.+.-+... .........+...+.++||.+.+... ..+.+|+.++ .++++
T Consensus 341 ~p~--v~~vrG~Gl~~~ie~~~~~~~------~~~~~~~~~l~~~~~~~Gv~i~~~g~-----~~~~irl~P~l~i~~~e 407 (421)
T PRK09792 341 VPA--IAAVRGLGSMIAAEFNDPQTG------EPSAAIAQKIQQRALAQGLLLLTCGA-----YGNVIRFLYPLTIPDAQ 407 (421)
T ss_pred CCC--cceecccceEEEEEecCCccC------CcchHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEeCCCcCCHHH
Confidence 443 334566 88899665422100 00000123344556678999964221 2347999988 78999
Q ss_pred HHHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFND 448 (463)
Q Consensus 436 i~~~~~~l~~~l~ 448 (463)
+++++++|.+++.
T Consensus 408 i~~~~~~l~~~l~ 420 (421)
T PRK09792 408 FDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998874
No 236
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.6e-16 Score=158.31 Aligned_cols=209 Identities=12% Similarity=0.120 Sum_probs=139.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cC
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FH 163 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g 163 (463)
..|+ .+..+.++++++.+....+ .++.+++++ +++|+..++.+++ +|||+|+++ .|
T Consensus 56 y~Ys--R~gnPt~~~Le~~la~le~---~~~~v~~sS-G~aAi~~~l~all-~~GD~Vlv~~~~Y~~~~~l~~~~l~~~G 128 (395)
T PRK05967 56 YTYG--TRGTPTTDALCKAIDALEG---SAGTILVPS-GLAAVTVPFLGFL-SPGDHALIVDSVYYPTRHFCDTMLKRLG 128 (395)
T ss_pred CccC--CCCChHHHHHHHHHHHHhC---CCCEEEECc-HHHHHHHHHHHhc-CCCCEEEEccCCcHHHHHHHHHHHHhcC
Confidence 3454 3334555556665543322 334555555 6899999999998 999999997 23
Q ss_pred cee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 164 TTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 164 ~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
+++ .-+ . -+. +.+++++++ ++|+|++++|+||++. ..++++|+++|+++|+++++|++|+...+-
T Consensus 129 i~v~~vd-~-~~~-e~l~~al~~------~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-- 194 (395)
T PRK05967 129 VEVEYYD-P-EIG-AGIAKLMRP------NTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF-- 194 (395)
T ss_pred eEEEEeC-C-CCH-HHHHHhcCc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec--
Confidence 333 111 1 134 778888877 8999999999999764 467999999999999999999999864331
Q ss_pred CCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 243 RPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
.++ .+ + -.|++.|.+|.++|..++.+|+++ .+++..+++..... .+...++.....+..-+
T Consensus 195 ---~pl-~~--------G---aDivv~S~tKy~~Gh~d~~~G~v~---~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl 256 (395)
T PRK05967 195 ---RPL-DF--------G---VDISIHAATKYPSGHSDILLGTVS---ANEKCWPQLLEAHGTLGLCAGPDDTYQILRGL 256 (395)
T ss_pred ---Chh-Hc--------C---CCEEEEecccccCCCCCeeEEEEE---cCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCc
Confidence 111 11 2 238999999998777888899877 57777777764444 33344444433333332
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+.+.-+.++..++...+.+.|++.|.+
T Consensus 257 --------------~Tl~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 257 --------------RTMGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 223334455677778888888887665
No 237
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.79 E-value=1.5e-16 Score=163.84 Aligned_cols=316 Identities=14% Similarity=0.099 Sum_probs=192.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCcc---CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHH--HH-HHhcCCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAY---SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQT--LN-CVIRGEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~--~~-~l~~~~g 155 (463)
|+.+.+++.+.... ...+.| +..+|..+++.++++++.+.+|.+ ...+..++|+.+.+..+ ++ .+. ++|
T Consensus 83 ~p~i~~~~~~~~~~--~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~-~~G 157 (481)
T PRK04366 83 NPKINEKVARLPGF--AELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHE-ARG 157 (481)
T ss_pred CHHHHHHHHhCcch--hcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhh-ccC
Confidence 78888888765222 245777 457799999999999999988864 34555667766665533 32 334 677
Q ss_pred C----EEEEc-------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 156 D----GVVLL-------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 156 d----~Vlvp-------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
| +|+++ .|+++ ...++.+|+ +.|++.+.+ ++++|++++|| |||.+ .+++
T Consensus 158 d~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~-e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl 227 (481)
T PRK04366 158 DTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDL-EALKAAVGE------DTAALMLTNPN-TLGLF--ERNI 227 (481)
T ss_pred cCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCH-HHHHhhccc------CCeEEEEeCCC-Ccccc--chHH
Confidence 6 88886 56666 334578999 999999977 79999999998 99964 3579
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC----CceeEEEEecC
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC----GQRGGYFEMTN 290 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~----G~R~G~~~~~~ 290 (463)
++|+++|+++|+++++|.++..... +.. +. .+.+-.++++|.+|+| +.| |-.+|++.+
T Consensus 228 ~eI~~~a~~~gal~iVD~a~~~~~~-g~~---~~-----------~~~GaD~~~~~~hK~l-~~P~g~Ggp~~G~l~~-- 289 (481)
T PRK04366 228 LEIAEIVHEAGGLLYYDGANLNAIL-GKA---RP-----------GDMGFDVVHLNLHKTF-STPHGGGGPGSGPVGV-- 289 (481)
T ss_pred HHHHHHHHHcCCEEEEEecChhhhc-ccC---Cc-----------cccCCCEEEEechhhc-CCCCCCCCCCeeeeee--
Confidence 9999999999999999999864322 111 11 1112348889999998 433 334788875
Q ss_pred CChhHHHHHHhh----h--hh--------------cccCChHHHHHHHHhcCCCCCCCchHHHHHHH-HHHHHHHHHHHH
Q 041151 291 IPPKTVDEIYKI----A--SI--------------ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE-SKGILESLRRRA 349 (463)
Q Consensus 291 ~~~~~~~~l~~~----~--~~--------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 349 (463)
.+++.+.+... . .. ..+.+.....++..++. .+-.+ ++++.++..++.
T Consensus 290 -~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~----------~~G~~Gl~~~a~~~~~~a 358 (481)
T PRK04366 290 -KEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIR----------SLGAEGLREVSEDAVLNA 358 (481)
T ss_pred -hhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH
Confidence 55555544100 0 00 00001111122222211 11111 334456667778
Q ss_pred HHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 350 RMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 350 ~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
+++.+.|.++..+.+..+.-.-++ +..+. + ...+. +..+ +.+.|.++||.+. +..+.. .....+|+|+
T Consensus 359 ~~l~~~L~~~~~~~~~~~~~~~~~---~~~~~-~----~~~g~-~~~~-v~~~L~~~Gi~~~-~~~~p~-~~~~~l~is~ 426 (481)
T PRK04366 359 NYLKARLKDIYDLPYDRPCMHEFV---LSGKK-L----KETGV-RTLD-IAKRLLDYGFHPP-TIYFPL-IVPEALMIEP 426 (481)
T ss_pred HHHHHHhHhhCcccCCCCeeEEEE---EECcc-c----cccCC-CHHH-HHHHHHHCCccCC-cccccc-ccCCeEEEcc
Confidence 889988887523332111111121 12110 0 00001 2334 4556778899865 222211 1134799999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
. ++.+||+++++.|+++.++.++.
T Consensus 427 ~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 427 TETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 8 78999999999999998887653
No 238
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=1.2e-16 Score=159.64 Aligned_cols=199 Identities=13% Similarity=0.154 Sum_probs=128.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cC--------------ceecCCCc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FH--------------TTWKRQQI 171 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g--------------~~~~~~~~ 171 (463)
...|++.++++.+ ....+++++| +.++..++. ++ +|||+|+++ ++ +++ ....
T Consensus 52 ~~~Le~~la~l~g-------~~~al~~~SG-~~Al~~~l~-~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v-~~vd 120 (380)
T PRK06176 52 RFALEELIADLEG-------GVKGFAFASG-LAGIHAVFS-LF-QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSC-TIID 120 (380)
T ss_pred HHHHHHHHHHHhC-------CCCEEEECCH-HHHHHHHHH-Hc-CCCCEEEEcCCChhHHHHHHHHHHHhcCeEE-EEcC
Confidence 5678888888864 2234555555 668887664 65 899999997 22 222 1111
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
..|+ +.+++++++ ++++|++++|+||||.+.+ +++|+++|++++++||+|++|+...+. .+ + ..
T Consensus 121 ~~d~-e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~--~p---~-~~ 184 (380)
T PRK06176 121 TSDL-SQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ--NP---L-LL 184 (380)
T ss_pred CCCH-HHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC--Cc---c-cc
Confidence 2477 999998876 8999999999999999987 667888889999999999999865431 11 1 11
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCC-ceeEEEEecCCChhHHHHHHhhhhh-cccCChHHHHHHHHhcCCCCCCCc
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKIASI-ALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
. -.+++.|+||.+ +.+| .-.|++++ .++++.+++...+.. ....++.....+...++
T Consensus 185 --------g---aDivv~S~tK~l-~g~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~------- 243 (380)
T PRK06176 185 --------G---ADIVVHSGTKYL-GGHSDVVAGLVTT--NNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK------- 243 (380)
T ss_pred --------C---CCEEEecCceec-cCCccceeeEEEe--cHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC-------
Confidence 1 238999999999 4444 56777774 456777777666552 22233333333322221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
.+..+.++..++...+.+.|++.|.+
T Consensus 244 -------tl~~R~~~~~~~a~~la~~L~~~p~v 269 (380)
T PRK06176 244 -------TLGLRMEAHQKNALCVAEFLEKHPKV 269 (380)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 11122333445566677777766544
No 239
>PRK05939 hypothetical protein; Provisional
Probab=99.78 E-value=1.8e-16 Score=159.11 Aligned_cols=147 Identities=15% Similarity=0.201 Sum_probs=109.5
Q ss_pred ccCCCCCCH---HHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c-------------
Q 041151 102 AYSDSRGIP---GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F------------- 162 (463)
Q Consensus 102 ~Y~~~~g~~---~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~------------- 162 (463)
.|+. .|.+ .|+++++++.+ .+..+++++++.++..++.+++ ++||+|+++ +
T Consensus 40 ~Y~r-~g~p~~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~ 109 (397)
T PRK05939 40 TYAR-QGTPTTAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGL 109 (397)
T ss_pred CcCC-CCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhc
Confidence 4543 2555 88888888864 2334444445899999999998 999999997 2
Q ss_pred Ccee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCC
Q 041151 163 HTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 163 g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~ 241 (463)
|+++ .-+ ..|. +++++.+++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+....
T Consensus 110 G~~v~~v~--~~d~-e~l~~~l~~------~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~-- 175 (397)
T PRK05939 110 GVEVTMVD--ATDV-QNVAAAIRP------NTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWL-- 175 (397)
T ss_pred CCEEEEEC--CCCH-HHHHHhCCC------CCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccc--
Confidence 3333 111 1377 999999876 89999999999999988 4589999999999999999999864211
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
... ...+..|++.|+||.+ +.+|.++|++++
T Consensus 176 ---~~~------------~~~gaDivv~S~sK~~-~g~g~~igg~v~ 206 (397)
T PRK05939 176 ---FRP------------KDVGASLVINSLSKYI-AGHGNALGGAVT 206 (397)
T ss_pred ---cCc------------cccCCEEEEecCeecc-cCCCCeEEEEEe
Confidence 001 1112458999999999 778999999886
No 240
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.2e-16 Score=161.76 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------------cCCCcc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------------KRQQIG 172 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------------~~~~~~ 172 (463)
...|++++|++.+ .+..++++++++++..++.+++ ++||+|+++ ++... ......
T Consensus 60 ~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~-~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 60 NDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIA-EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 4688888888864 2456677777899999999998 899999997 33211 000112
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
.|+ +.+++++++ ++++|++++|+||||.+++ +++|.++|++++++||+|++|+.... ..++ ..
T Consensus 131 ~d~-e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-----~~p~-~~- 193 (425)
T PRK06084 131 DDI-AALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-----CRPF-EH- 193 (425)
T ss_pred CCH-HHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----CChh-hc-
Confidence 478 999999987 7999999999999999998 67788889999999999999985422 1111 11
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
. -.|++.|+||++ +.+|.++|.+++
T Consensus 194 -------g---aDivv~S~tK~l-~G~g~~~gG~v~ 218 (425)
T PRK06084 194 -------G---ADIVVHSLTKYI-GGHGTSIGGIVV 218 (425)
T ss_pred -------C---CCEEEECchhcc-cccccceeEEEE
Confidence 1 238999999999 778999998876
No 241
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=6.2e-17 Score=162.83 Aligned_cols=203 Identities=9% Similarity=0.039 Sum_probs=138.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCceecCCCc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTWKRQQI 171 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~~~~~~ 171 (463)
...|++.+|++.+ .+..+.+++++.|+.+++.+++ ++||+|+++ .|+++..-+.
T Consensus 63 v~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 4678888888864 3457889999999999999998 899999998 3444422234
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
.+|+ +.+++++++ ++|+|++++|+||++.+.+ +++|+++|+++|+++|+|++|+...+ ..++ ..
T Consensus 134 ~~d~-~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~-----~~pl-~~ 197 (432)
T PRK06702 134 NLTA-DEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL-----CQAF-EH 197 (432)
T ss_pred CCCH-HHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----CChh-hc
Confidence 5688 999999988 8999999999999999988 88888899999999999999863211 0011 11
Q ss_pred HHhcCCCCCCCceEEEEecCCcccC----CCCCcee-----EEEEecCCChhHH---------------------HHHH-
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYW----GECGQRG-----GYFEMTNIPPKTV---------------------DEIY- 300 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~----g~~G~R~-----G~~~~~~~~~~~~---------------------~~l~- 300 (463)
.. .|+++|+||.++ +++|+++ +|... .+.+++ .+..
T Consensus 198 --------GA---DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
T PRK06702 198 --------GA---NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNG--KYPELVEPDPSYHGVSYVQNFGAAAYIVKARV 264 (432)
T ss_pred --------CC---CEEEEccccccCCCcceeceEEEeCCCcccccc--cccccccccccccccchhhccchhhHHHHHHH
Confidence 22 389999999543 4455554 34331 011221 1111
Q ss_pred -hhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 301 -KIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 301 -~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.........+++....+...|+. +..+.++..++...+.+.|++.|++.
T Consensus 265 ~~~~~~g~~~sp~~a~l~~rgL~T--------------l~lR~~r~~~Na~~la~~L~~~p~V~ 314 (432)
T PRK06702 265 QLLRDYGNCMSPFNAYISNIGLET--------------LHLRMERHSENALAVAKWLADHERIE 314 (432)
T ss_pred HHHHHccCCCCHHHHHHHHhccCc--------------HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 12233456666666666666542 22334445688889999999887654
No 242
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.78 E-value=1e-16 Score=162.44 Aligned_cols=256 Identities=9% Similarity=0.026 Sum_probs=165.3
Q ss_pred CCCCcEEEcCCcHHHHHHHHHHHhcCCCC---EEEEc-----------------cCcee--------cCCCcccChHHHH
Q 041151 128 SDPELIFLTDGASKGVMQTLNCVIRGEGD---GVVLL-----------------FHTTW--------KRQQIGVLIINDL 179 (463)
Q Consensus 128 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd---~Vlvp-----------------~g~~~--------~~~~~~~d~~~~l 179 (463)
.++++|++|+|++++++.++..++ ++++ .|++. .|.++ ....+.+|+ +.+
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~-~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~-~~l 161 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFY-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL-EDI 161 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhc-CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH-HHH
Confidence 578899999999999999999886 5642 56665 24331 233456788 999
Q ss_pred HHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCC
Q 041151 180 QQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPF 259 (463)
Q Consensus 180 ~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (463)
++.++.. .+++++|++++++|.||.+.+ +++|.++|+++|+++++|++++.... +..+.
T Consensus 162 ~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~---------- 220 (406)
T TIGR01814 162 LDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNV-----PLDLH---------- 220 (406)
T ss_pred HHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCc-----ccccc----------
Confidence 8887531 127999999999999999998 77788889999999999999986432 12221
Q ss_pred CCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhh-h-----------------------hcccCChHHHH
Q 041151 260 SKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIA-S-----------------------IALSPNVPAQI 315 (463)
Q Consensus 260 ~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~-----------------------~~~~~~~~~q~ 315 (463)
+.+..+++.|.+|+++|.|| .|..+ ..+ ....+.... . ...+++.....
T Consensus 221 -~~gvD~~~~s~hK~l~g~pG--~~l~v---~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~ 293 (406)
T TIGR01814 221 -DWGVDFACWCTYKYLNAGPG--AGAFV---HEK-HAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVA 293 (406)
T ss_pred -cCCCCEEEEcCccccCCCCC--eEEEE---ehh-hhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHH
Confidence 22234889999998855566 44333 132 222221110 0 01223444444
Q ss_pred HHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhcC----CCcccccCC-----ceeEEeeeccCChhhH
Q 041151 316 FMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNSC----RNVVCNFTE-----GAMYSFPQIRLPPKAI 384 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~----pg~~~~~~~-----g~~~~~~~~~~~~~~~ 384 (463)
++.++++ +..+ .+.++++.++..+++.+.|.+. +|+.+..|. ++.. . +.+|.
T Consensus 294 ~l~~al~-----------~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v-~--~~~~~--- 356 (406)
T TIGR01814 294 ALRGSLD-----------IFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQL-S--LTHPV--- 356 (406)
T ss_pred HHHHHHH-----------HHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeE-E--EEecC---
Confidence 4554542 2211 4567777888888888888764 357666542 2233 2 23331
Q ss_pred HHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe-c--CCcCcHHHHHHHHHHHH
Q 041151 385 EAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI-L--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~-~--~~~e~i~~~~~~l~~~l 447 (463)
+..+ +...|.++||.+... ..+.+|+|+ . ++++|+++++++|++++
T Consensus 357 ---------~~~~-~~~~L~~~gi~v~~~-------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 357 ---------PGKA-VFQALIKRGVIGDKR-------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ---------CHHH-HHHHHHHCCEEEecc-------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 1233 445567789987531 123799998 4 79999999999998764
No 243
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.78 E-value=1.6e-16 Score=159.25 Aligned_cols=297 Identities=14% Similarity=0.201 Sum_probs=181.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHH-hcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCV-IRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv 160 (463)
.+..++++.+.+.+ . ..| |..++++++++++.+.+| .+++++++|+++++..++.++ + ++||+|++
T Consensus 10 ~~~~~~~~~~~l~~---~-~~~----g~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~-~~Gd~Viv 76 (375)
T PRK11706 10 VGTELDYIQQAMSS---G-KLC----GDGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDI-QPGDEVIM 76 (375)
T ss_pred CHHHHHHHHHHHHc---C-Ccc----CCCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCC-CCCCEEEE
Confidence 55667777776665 1 122 334677777777766533 468999999999999888766 5 89999999
Q ss_pred c-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 161 L-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 161 p-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
| .|+++ ..+.+.+|+ +++++.+++ ++|+|++++ ++|...+ +++|.++|+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~-~~le~~i~~------~tk~i~~~~---~~G~~~~---~~~i~~la~ 143 (375)
T PRK11706 77 PSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDE-TLIEAAITP------KTRAIVPVH---YAGVACE---MDTIMALAK 143 (375)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCH-HHHHHhcCC------CCeEEEEeC---CCCCccC---HHHHHHHHH
Confidence 8 67776 334567999 999999876 799998764 6898765 677888888
Q ss_pred hCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC--cccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 223 QENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS--KGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 223 ~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
++|++||+|++|+.+...++.+..++ . .+.+.||+ |.+ + +|.++++++ .++++.++++
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~~~~g~~-----------~----~~~~~Sf~~~K~l-~-~g~gG~~~~---~~~~~~~~~~ 203 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKGRALGTI-----------G----HIGCFSFHETKNY-T-AGEGGALLI---NDPALIERAE 203 (375)
T ss_pred HcCCEEEEECccccccccCCeeeecC-----------c----CEEEEeCCCCccc-c-ccCCeEEEE---CCHHHHHHHH
Confidence 99999999999997652122221111 1 13444554 998 5 588877877 6888888777
Q ss_pred hhhhhc------------------ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 041151 301 KIASIA------------------LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCR-- 360 (463)
Q Consensus 301 ~~~~~~------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~p-- 360 (463)
.++... .+.+...+...+++.. ..++.+++..++-+++.+.+.+.|.+++
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~----------~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~ 273 (375)
T PRK11706 204 IIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLW----------AQLEAADRINQRRLALWQRYYDALAPLAEA 273 (375)
T ss_pred HHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 665311 1222222222222210 1233344555555666667777777765
Q ss_pred C-cccc-cCCc----eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC----C------CCCC----C
Q 041151 361 N-VVCN-FTEG----AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS----G------FGQK----E 420 (463)
Q Consensus 361 g-~~~~-~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~----~------f~~~----~ 420 (463)
| +.+. .+.+ .++.++.+. .+ .+.+.+.+.|.++||.++... . ++.. +
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p 340 (375)
T PRK11706 274 GRIELPSIPDDCKHNAHMFYIKLR--DL-----------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDR 340 (375)
T ss_pred CeeecCCCCCCCceeeEEEEEEEC--Cc-----------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCCh
Confidence 2 3322 1222 223443332 21 123345566888899875321 0 0000 0
Q ss_pred -----CCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 421 -----GIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 421 -----~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
....+-|-+. .+++|++..++.|++++
T Consensus 341 ~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 341 YTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 0123444444 67788888888888764
No 244
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=5.9e-17 Score=164.82 Aligned_cols=332 Identities=14% Similarity=0.166 Sum_probs=201.0
Q ss_pred hcccceeccCCCCcC-CCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHH
Q 041151 36 EGKKIIFTNVGNPHA-LGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRK 114 (463)
Q Consensus 36 ~~~~~i~l~~G~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~ 114 (463)
+|++++||..|.+.. +|+ + ++.+.+++.+++... ...|.+..+..+|.+
T Consensus 48 dG~~~lD~~~g~~~~~lGh-----------------------~----~p~i~~a~~~~~~~~---~~~~~~~~~~~~la~ 97 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGH-----------------------A----HPEVVEAVIEAAEKG---LSFGAPTELEVELAE 97 (426)
T ss_pred CCCEEEEcccchhhhhcCC-----------------------C----CHHHHHHHHHHHHhC---CcCCCCCHHHHHHHH
Confidence 577788988886542 221 1 788999999888762 233334333445555
Q ss_pred HHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEEc----cCcee----c--------------C---
Q 041151 115 EVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVLL----FHTTW----K--------------R--- 168 (463)
Q Consensus 115 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlvp----~g~~~----~--------------~--- 168 (463)
.+++.+ ...+.+++++++++|+..+++.... ..++.|+.. +|... . .
T Consensus 98 ~L~~~~-------~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~ 170 (426)
T PRK00062 98 LVIELV-------PSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPE 170 (426)
T ss_pred HHHHhC-------CCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCc
Confidence 555443 1356899999999999999998541 124666664 33220 0 0
Q ss_pred ----CCcc---cChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCC-HHHHHHHHHHhhhCCeEEEeccccccccc
Q 041151 169 ----QQIG---VLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLS-EANLREILRFCYQENLVLLGDEVYQQNIY 239 (463)
Q Consensus 169 ----~~~~---~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~ 239 (463)
.... .|+ +.+++.+... ..++.+|++. .++| +|.+.+ .+.+++|.++|++||+++|+||+|..+..
T Consensus 171 ~~~~~~~~~~~~d~-~~l~~~i~~~---~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~ 245 (426)
T PRK00062 171 DFAKHTLTAPYNDL-EAVEELFEEY---GDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV 245 (426)
T ss_pred ccccceEEcCCCCH-HHHHHHHHhC---CCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc
Confidence 0000 267 8888888642 1267788887 5555 787775 77899999999999999999999987644
Q ss_pred CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh---hh-hcccCChHHHH
Q 041151 240 QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI---AS-IALSPNVPAQI 315 (463)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---~~-~~~~~~~~~q~ 315 (463)
+... ... .+++ ..+ +.++||.+ + .|+++|+++ +++++++.+... .. .+++.+++.+.
T Consensus 246 -g~~~---~~~---~~~~--~pD-----i~~~gK~l-~-~G~p~ga~~---~~~~i~~~~~~~~~~~~~~T~~~~p~~~a 306 (426)
T PRK00062 246 -ALGG---AQG---YYGV--TPD-----LTTLGKII-G-GGLPVGAFG---GRREIMEQLAPLGPVYQAGTLSGNPLAMA 306 (426)
T ss_pred -CCcc---HHH---HhCC--Ccc-----hHhhhhHh-h-CCCcceeee---EHHHHHHhhccCCCceecccCcCCHHHHH
Confidence 2211 111 1111 111 36899999 6 789999998 588888888532 22 35678888988
Q ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCccc-ccCCceeEEeeeccCChhh-HHHHhh
Q 041151 316 FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN----SCRNVVC-NFTEGAMYSFPQIRLPPKA-IEAAKR 389 (463)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~pg~~~-~~~~g~~~~~~~~~~~~~~-~~~~~~ 389 (463)
++.+.|+- ++. ++.+++.+++.+++.+.|+ +. ++.. ..+.|.++.+. +..+... .. ...
T Consensus 307 aa~a~L~~-----------~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg~G~~~~i~-l~~~~~~~~~-~~~ 371 (426)
T PRK00062 307 AGLATLKL-----------LKE-PGFYEELEALTKRLAEGLKEAAKKA-GIPLTVNRVGSMFGLF-FTDEPVTNYA-DAK 371 (426)
T ss_pred HHHHHHHH-----------Hhc-chHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecceEEEE-EecCCCcchh-hhc
Confidence 88887742 111 0233334444444444443 44 3333 34556665432 2111000 00 000
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+.......+...|.++||.+.|.. + ..+|+++..+++++++++++|+++++++
T Consensus 372 ~~~~~~~~~i~~~l~~~Gv~v~~~~-~------~~~~~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 372 KSDTERFARFFHAMLDEGVYLAPSQ-F------EAGFVSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cccHHHHHHHHHHHHHCCeEeecCC-c------CceeeeccCCHHHHHHHHHHHHHHHHhh
Confidence 0000012234555678899998732 1 1367887789999999999999998754
No 245
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=1.3e-16 Score=161.69 Aligned_cols=320 Identities=11% Similarity=0.021 Sum_probs=192.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+.+.+.. .+.......+.+..+++.+.+..... ..+.+++++++++|+..+++.... ....+|+.
T Consensus 58 ~p~v~~ai~~ql~~l~----~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~ 132 (425)
T PRK07495 58 HPRVIAAVKAQLDRFT----HTCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEAVENAVKIARAATGRSAVIA 132 (425)
T ss_pred CHHHHHHHHHHHhhcc----CcccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHhhCCCeEEE
Confidence 6789999988887631 11111111234445666655432110 125899999999999999986531 12345554
Q ss_pred c----cCcee----------------------------cCCCcccC----hHHHHHHHHHHHHhcCCceeEEEEE-CCCC
Q 041151 161 L----FHTTW----------------------------KRQQIGVL----IINDLQQSVAQARSKGITVRAMVII-NPGN 203 (463)
Q Consensus 161 p----~g~~~----------------------------~~~~~~~d----~~~~l~~~l~~~~~~~~~~~~i~l~-~p~N 203 (463)
- +|... +....+.+ + +.+++.+... ..+.++.+|++. ..+|
T Consensus 133 ~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~l~~~~~~~-~~~~~iaavi~EPv~g~ 210 (425)
T PRK07495 133 FGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSL-AALDKLFKAD-VDPQRVAAIIIEPVQGE 210 (425)
T ss_pred ECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHH-HHHHHHHHhc-cCCCceEEEEECCccCC
Confidence 3 22211 00000111 3 4456655421 011257888777 5566
Q ss_pred CCc-cCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCce
Q 041151 204 PTG-QCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR 282 (463)
Q Consensus 204 PtG-~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R 282 (463)
+| ..++.+.+++|.++|++||+++|+||+|..+... +.. ... ...+.+..+.||||.+ + +|++
T Consensus 211 -~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G~~-~a~-----------~~~gv~pDi~tlsK~l-~-~G~p 274 (425)
T PRK07495 211 -GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFART-GKL-FAM-----------EHHEVAADLTTMAKGL-A-GGFP 274 (425)
T ss_pred -CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcC-CCc-eee-----------cccCCCCCEEeehhhh-c-CCcc
Confidence 78 4579999999999999999999999999876442 211 111 1112345678999999 5 7999
Q ss_pred eEEEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc---
Q 041151 283 GGYFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS--- 358 (463)
Q Consensus 283 ~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 358 (463)
+|+++ +++++.+.+.... ..+++.+++.+.++.+.++ +++ ...+.++.+++.+++.+.|++
T Consensus 275 igav~---~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~-----------~l~-~~~l~~~~~~~g~~l~~~L~~l~~ 339 (425)
T PRK07495 275 LAAVT---GRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLD-----------VIE-EEDLCERANQLGNRLKQRLASLRE 339 (425)
T ss_pred ceEEE---EcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH-----------HHH-hchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 5888888775433 2577889999987777763 221 112444445555555555543
Q ss_pred -CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCc
Q 041151 359 -CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEED 435 (463)
Q Consensus 359 -~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~ 435 (463)
+|.+.-+... |+++|+.+.-+... .....-...+...+.++||.+.+.... .+.+||... .++++
T Consensus 340 ~~~~i~~vrG~-Gl~~~iel~~~~~~------~~~~~~~~~~~~~~~~~Gvl~~~~g~~-----~~~~r~~Ppl~it~~~ 407 (425)
T PRK07495 340 TVPEIADIRGP-GFMNAVEFNDADSG------LPSAEFANRVRLKALEKGLILLTCGVH-----GNVIRFLAPITIQDDV 407 (425)
T ss_pred hCCCeeeeecC-ceEEEEEEecCCCC------CccHHHHHHHHHHHHHCCeEEeecCCC-----CCEEEEeCCCccCHHH
Confidence 2333222223 68888666422100 000001233445567899999763221 247999988 89999
Q ss_pred HHHHHHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFNDEFM 451 (463)
Q Consensus 436 i~~~~~~l~~~l~~~~ 451 (463)
+++++++|.++++++.
T Consensus 408 id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 408 FAEALDILEASILEAS 423 (425)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 246
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.77 E-value=1.6e-16 Score=144.59 Aligned_cols=317 Identities=17% Similarity=0.161 Sum_probs=205.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCH----HHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIP----GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~----~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
+|+++++..++++.++....+-.-.+|++ .|...||+|.+ .|+.++.+.+-.|...++.+++ .|.|.
T Consensus 83 hPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--------rED~ilypscfdANag~feail-~pedA 153 (417)
T KOG1359|consen 83 HPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--------REDTILYPSCFDANAGAFEAIL-TPEDA 153 (417)
T ss_pred ChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--------CCceEEeccccccchHHHHHhc-Chhhh
Confidence 78999999999998754443433455655 55666666653 5778888888899999999998 89999
Q ss_pred EEEc--------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 158 VVLL--------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 158 Vlvp--------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
|+-+ .|+++-..-...|+ ..++..+.+..+- +-|+|+....-...|.+.| +++|.+++++||.+++
T Consensus 154 vfSDeLNhASIIdGirLckry~h~dv-~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlf 227 (417)
T KOG1359|consen 154 VFSDELNHASIIDGIRLCKRYRHVDV-FDLEHCLISACKM--RLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLF 227 (417)
T ss_pred hhccccccchhhhhhHHHhhhccchh-HHHHHHHHHhhhh--eEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEE
Confidence 8887 55555334445666 7777666543222 5677766677777899988 6667777889999999
Q ss_pred ecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccC
Q 041151 230 GDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSP 309 (463)
Q Consensus 230 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~ 309 (463)
+||.|+.+.++ +...... .. ++. ..+ -.|..++++|++ | |.-.||.. +|+.+++.+++.....+..
T Consensus 228 iDecHaTgf~G-~tGrGt~-E~---~~v--m~~-vdiinsTLgKAl-G--ga~GGytt---gp~~li~llrqr~RpylFS 293 (417)
T KOG1359|consen 228 IDECHATGFFG-ETGRGTA-EE---FGV--MGD-VDIINSTLGKAL-G--GASGGYTT---GPKPLISLLRQRSRPYLFS 293 (417)
T ss_pred Eeecccceeec-CCCCChH-HH---hCC--CCc-ceehhhhhhhhh-c--CCCCCCcc---CChhHHHHHHhcCCceeec
Confidence 99999988883 3332222 21 211 122 357889999998 3 55569998 7999999998775422222
Q ss_pred ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhh
Q 041151 310 NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKR 389 (463)
Q Consensus 310 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (463)
+.+...++.... ..|+..+ .......+.+.+-+.+++..+.. |+.+.......... -+....
T Consensus 294 nslppavV~~a~-------ka~dllm-~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI~pv---~lGda~------ 355 (417)
T KOG1359|consen 294 NSLPPAVVGMAA-------KAYDLLM-VSSKEIQSRQANTQRFREFMEAA-GFTISGASHPICPV---MLGDAR------ 355 (417)
T ss_pred CCCChhhhhhhH-------HHHHHHH-hhHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCccce---ecccHH------
Confidence 222211111110 1111122 12233444556666666666655 87776533322211 111110
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
-...+..++| +.||+|...+..-.+++...+|+.++ +++|+++++++++.++.+.+
T Consensus 356 ----lA~~~ad~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 356 ----LASKMADELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred ----HHHHHHHHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 1345555555 57999998776667778888999998 89999999999999887654
No 247
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=7.9e-16 Score=149.89 Aligned_cols=266 Identities=15% Similarity=0.207 Sum_probs=195.8
Q ss_pred CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---------------cCcee----cCCCcccChHHHHHHHHHHHHhcCC
Q 041151 131 ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGI 191 (463)
Q Consensus 131 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~ 191 (463)
+-++++.+++.+++.++..++ +|||+|++. +|..+ .+.+..+|+ ++++++|++ ++
T Consensus 57 ~~~ll~gsGt~amEAav~sl~-~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p-~~v~~~L~~----~~ 130 (383)
T COG0075 57 DVVLLSGSGTLAMEAAVASLV-EPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDP-EEVEEALDK----DP 130 (383)
T ss_pred cEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCH-HHHHHHHhc----CC
Confidence 456677788999999999998 999999997 55555 556677999 999999995 23
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecC
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTV 271 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 271 (463)
+.++|.+++.-.+||...+ +++|+++|++|+.++|+|.+-+.. +.+. .+ ++++-.+++.+.
T Consensus 131 ~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS~G----g~~~-~v-----------d~wgiDv~itgS 191 (383)
T COG0075 131 DIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSSLG----GEPL-KV-----------DEWGIDVAITGS 191 (383)
T ss_pred CccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEecccCC----Cccc-ch-----------hhcCccEEEecC
Confidence 6899999999999999976 788888999999999999987742 2221 22 556667999999
Q ss_pred CcccCCCCCceeEEEEecCCChhHHHHHHhh---------------h----hhcccCChHHHHHHHHhcCCCCCCCchHH
Q 041151 272 SKGYWGECGQRGGYFEMTNIPPKTVDEIYKI---------------A----SIALSPNVPAQIFMGLMVNPLKPGDISYE 332 (463)
Q Consensus 272 SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---------------~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 332 (463)
.|++.++|| +|.+.+ +++..+++... + ...++++....+++..+|+
T Consensus 192 QK~l~~PPG--la~v~~---S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~---------- 256 (383)
T COG0075 192 QKALGAPPG--LAFVAV---SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALD---------- 256 (383)
T ss_pred chhccCCCc--cceeEE---CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH----------
Confidence 999988999 688875 77666665422 1 1245555555666666653
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhcCCCcccccCC---ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCe
Q 041151 333 QFVRE-SKGILESLRRRARMMTDGFNSCRNVVCNFTE---GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGI 408 (463)
Q Consensus 333 ~~~~~-~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI 408 (463)
..+++ ++...++++++.+++++.++++ |++..... ...... +..|.+. + +.+....+++++|+
T Consensus 257 ~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta--~~~P~g~---------~-~~~~~~~~~~~~g~ 323 (383)
T COG0075 257 LILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTA--IKVPEGV---------D-DKKVRRALLKEYGV 323 (383)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEE--EECCCCC---------C-cHHHHHHHHHhCCE
Confidence 34444 5778889999999999999998 88877622 111222 3455542 2 33344478888899
Q ss_pred EeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 409 STVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 409 ~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.+.+|..--. + ..+||+.. .+.+++..++.+|..++.++..
T Consensus 324 ~i~gg~~~l~--g-kifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 324 EIAGGQGPLK--G-KIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred EecccccccC--c-cEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 9977654322 2 37999998 7889999999999999887643
No 248
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.76 E-value=9.4e-16 Score=152.31 Aligned_cols=201 Identities=12% Similarity=0.143 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCceecCCCcc
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTWKRQQIG 172 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~~~~~~~ 172 (463)
..|.+.|++..+ .+.++++++|+.|+..++.+++ ++||+|+++ .|+++ ..-..
T Consensus 58 ~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll-~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v-~~~d~ 127 (386)
T PF01053_consen 58 RALEQRLAALEG--------GEDALLFSSGMAAISAALLALL-KPGDHIVASDDLYGGTYRLLEELLPRFGVEV-TFVDP 127 (386)
T ss_dssp HHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS--TTBEEEEESSSSHHHHHHHHHCHHHTTSEE-EEEST
T ss_pred HHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhc-ccCCceEecCCccCcchhhhhhhhcccCcEE-EEeCc
Confidence 456666666653 4788999999999999999998 899999997 33333 11112
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC-eEEEecccccccccCCCCCccchHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN-LVLLGDEVYQQNIYQDERPFVSSKKV 251 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~-~~vi~Deay~~~~~~~~~~~~~~~~~ 251 (463)
-|. +++++++++ ++++|++..|.||+..+.+ +++|+++|+++| +++++|+.++...+ ..+...
T Consensus 128 ~d~-~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~---~~pL~~--- 191 (386)
T PF01053_consen 128 TDL-EALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN---QNPLEL--- 191 (386)
T ss_dssp TSH-HHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT---C-GGGG---
T ss_pred hhH-HHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee---eccCcC---
Confidence 467 999999998 8999999999999988765 888888999998 99999999976432 111111
Q ss_pred HHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC-hhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCc
Q 041151 252 LMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-PKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
+. .|++.|.||.++|....-.|.+++ .+ .++.+.++.... .....++.....+..-++
T Consensus 192 --------Ga---Divv~S~TKyl~Ghsdv~~G~vv~--~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~------- 251 (386)
T PF01053_consen 192 --------GA---DIVVHSATKYLSGHSDVMGGAVVV--NGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR------- 251 (386)
T ss_dssp --------T----SEEEEETTTTTTTSSSE-EEEEEE--SSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT-------
T ss_pred --------Cc---eEEEeeccccccCCcceeeEEEEE--CchhhhhhhhcchhhhcCccchHHHHHHHhcCCC-------
Confidence 22 389999999997666666888886 34 578888876665 344444444444444432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
.+.-+.++..++...+.+.|++.|.+.
T Consensus 252 -------Tl~~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 252 -------TLPLRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp -------THHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 233456667888889999999887654
No 249
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=1.3e-15 Score=156.20 Aligned_cols=307 Identities=11% Similarity=0.037 Sum_probs=189.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCC---CCC---CHH----HHHHHHHHHHHhcCCCCCCCcEEEc---CCcHHHHHHHHH
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSD---SRG---IPG----VRKEVAEFIERRDGYPSDPELIFLT---DGASKGVMQTLN 148 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~---~~g---~~~----lr~~ia~~~~~~~g~~~~~~~i~~t---~G~~~al~~~~~ 148 (463)
++.+++++...+.+.. ..+|+. ..| ... .|+.++++++ .+++++.++ +|+++++..++.
T Consensus 47 s~~v~~~~~~~l~~~y--~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~------a~~~~~~~~~~~~sgt~an~~v~~ 118 (452)
T PTZ00094 47 SRAVLECLGSCFTNKY--AEGLPGNRYYGGNEVVDKIENLCQKRALEAFG------LDPEEWGVNVQPYSGSPANFAVYT 118 (452)
T ss_pred CHHHHHHhcchhhccc--cCCCCCccccccchHHHHHHHHHHHHHHHHhC------CCcccceeecCCCchHHHHHHHHH
Confidence 7888888887775421 012221 112 122 3446666665 566777666 788999999999
Q ss_pred HHhcCCCCEEEEc---cCcee------------------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECC
Q 041151 149 CVIRGEGDGVVLL---FHTTW------------------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINP 201 (463)
Q Consensus 149 ~l~~~~gd~Vlvp---~g~~~------------------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p 201 (463)
+++ ++||+|++. +|+.+ ....+.+|. ++|++.++.. ++++|++.+
T Consensus 119 al~-~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~-~~L~~~l~~~-----~~~lvi~~~- 190 (452)
T PTZ00094 119 ALL-QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDY-DKLEELAKAF-----RPKLIIAGA- 190 (452)
T ss_pred Hhc-CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCH-HHHHHHHHHh-----CCCEEEEeC-
Confidence 998 899999995 22211 122366899 9999999754 677776543
Q ss_pred CCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCc
Q 041151 202 GNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQ 281 (463)
Q Consensus 202 ~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~ 281 (463)
+.+|...+ +++|.++|+++|+++++|++++......+....++ . +-.+++.|.+|++. |-
T Consensus 191 -s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-----------~--~~D~l~~S~hK~l~---GP 250 (452)
T PTZ00094 191 -SAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-----------P--YADVVTTTTHKSLR---GP 250 (452)
T ss_pred -CCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-----------C--CCcEEEcCCccCCC---CC
Confidence 34888888 66667788899999999999987655211111111 1 12478999999884 34
Q ss_pred eeEEEEecCCChhHHHHHHhhh-----h-hcccCChHHHHHHHHhcCCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHH
Q 041151 282 RGGYFEMTNIPPKTVDEIYKIA-----S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFV-RESKGILESLRRRARMMTD 354 (463)
Q Consensus 282 R~G~~~~~~~~~~~~~~l~~~~-----~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 354 (463)
+.|++++ ++++.+.+.... . ...+++.....++.++++ ... ...+..++++.++.+++.+
T Consensus 251 ~Gg~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~----------~~~~~~~~~~~~~i~~l~~~l~~ 317 (452)
T PTZ00094 251 RSGLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLK----------EVQSPEWKEYAKQVLKNAKALAA 317 (452)
T ss_pred CceEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHH----------HHhChhHHHHHHHHHHHHHHHHH
Confidence 4588875 444444332221 1 111233333333333432 121 1234567788889999999
Q ss_pred HhhcCCCcccccCCc-eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEee-CCCCCCCC-CCCcEEEEEec-
Q 041151 355 GFNSCRNVVCNFTEG-AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTV-PGSGFGQK-EGIFHLRTTIL- 430 (463)
Q Consensus 355 ~L~~~pg~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~-pg~~f~~~-~~~~~lRis~~- 430 (463)
.|.+. |+.+..+.. ....++.+..+. -+...+..+|+++||.+. ++..+... ...+++|+|+.
T Consensus 318 ~L~~~-g~~v~~~~~~~~~~~v~~~~~~------------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~ 384 (452)
T PTZ00094 318 ALEKR-GYDLVTGGTDNHLVLVDLRPFG------------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPA 384 (452)
T ss_pred HHHhC-CcEEecCCCCCceEeecCCcCC------------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHH
Confidence 99886 777654321 223343343221 133456677888999994 44433311 12358999997
Q ss_pred -CC----cCcHHHHHHHHHHHHHHH
Q 041151 431 -PA----EEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 431 -~~----~e~i~~~~~~l~~~l~~~ 450 (463)
++ ++|++++++.|++++...
T Consensus 385 ~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 385 LTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 44 899999999999988753
No 250
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.6e-16 Score=151.88 Aligned_cols=306 Identities=14% Similarity=0.137 Sum_probs=201.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--C-CC-CE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--G-EG-DG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~-~g-d~ 157 (463)
+|.+++++++.+.........|. .+.+.++++.+.+..+ ..+.|++.|+++||++.+++.--+ . ++ .+
T Consensus 60 hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~ 131 (404)
T COG4992 60 HPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNSGAEANEAALKLARKYTGDPEKSK 131 (404)
T ss_pred CHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcE
Confidence 88999999887776322222332 2455566666654311 278999999999999999997531 2 22 24
Q ss_pred EEEc----cCcee----------cCCCcc-----------cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC-H
Q 041151 158 VVLL----FHTTW----------KRQQIG-----------VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS-E 211 (463)
Q Consensus 158 Vlvp----~g~~~----------~~~~~~-----------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s-~ 211 (463)
|+.. +|.+. ....|. =|+ +++++++++ ++.+|++.--+--.|.+.+ .
T Consensus 132 Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi-~al~~ai~~------~taAvivEPIQGEgGV~~~~~ 204 (404)
T COG4992 132 IIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDI-EALEAAIDE------DTAAVIVEPIQGEGGVIPAPP 204 (404)
T ss_pred EEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCH-HHHHHHhcc------CeEEEEEecccCCCCCCCCCH
Confidence 4443 33332 111121 177 999999998 8999988866777776654 4
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
+-++++-++|++||+++|.||+...+.-+ ..+.+. .++++ .. -|.++.|.+ | .|+.+|.++.
T Consensus 205 ~fl~~lr~lCd~~g~LLI~DEVQtG~GRT-----Gk~fA~-e~~gV--~P-----DI~tlaK~L-g-GG~PigA~la--- 266 (404)
T COG4992 205 EFLKALRELCDEHGALLILDEVQTGLGRT-----GKLFAY-EHYGV--EP-----DILTLAKAL-G-GGFPIGAMLA--- 266 (404)
T ss_pred HHHHHHHHHHHHhCeEEEEeccccCCCcc-----chHHHH-HHhCC--CC-----CEEEeeccc-c-CCccceeeEE---
Confidence 56899999999999999999999875331 233332 22222 22 235788999 5 6899999994
Q ss_pred ChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CC---ccccc
Q 041151 292 PPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC-RN---VVCNF 366 (463)
Q Consensus 292 ~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-pg---~~~~~ 366 (463)
++...+.+..-.. .+++.++++..++.+.|+ .+. .+++.++.+++-+++.+.|+++ .. ++-+.
T Consensus 267 ~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~-----------~l~-~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vR 334 (404)
T COG4992 267 TEEIASAFTPGDHGSTFGGNPLACAVALAVLE-----------VLL-EEGLLENVREKGEYLLQRLRELKRRYPLVKEVR 334 (404)
T ss_pred chhhhhcCCCCcccCCCCcCHHHHHHHHHHHH-----------HHc-chhHHHHHHHHHHHHHHHHHHHhhcCCceeeee
Confidence 5544555544332 578999999999988874 222 2346666777777888888774 11 22222
Q ss_pred CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 367 TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
.. |+++= +++.... ...++ ...+.++|+++.+. +.+.+|+... .+++++++++++|.
T Consensus 335 G~-GLmiG--iel~~~~----------~a~~~-~~~~~~~gvL~~~a-------~~~ViR~~PpL~i~~eei~~~~~~l~ 393 (404)
T COG4992 335 GR-GLMIG--IELKEPY----------RARDI-VRALREEGVLVLPA-------GPNVIRFLPPLVITEEEIDEALDALE 393 (404)
T ss_pred cc-eeEEE--EEecCcc----------cHHHH-HHHHHHCCeEEecC-------CCCeEEecCCccCCHHHHHHHHHHHH
Confidence 22 33333 4432210 12444 45677889999883 3447999999 79999999999999
Q ss_pred HHHHHHHHH
Q 041151 445 KFNDEFMEQ 453 (463)
Q Consensus 445 ~~l~~~~~~ 453 (463)
+++++....
T Consensus 394 ~~l~~~~~~ 402 (404)
T COG4992 394 RALAAASAR 402 (404)
T ss_pred HHHHHhhhc
Confidence 999876543
No 251
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.75 E-value=7.2e-16 Score=156.72 Aligned_cols=320 Identities=11% Similarity=0.062 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCC-cEEE-cCCcHHHHHHHHHHHhcCCC-CEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPE-LIFL-TDGASKGVMQTLNCVIRGEG-DGV 158 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~-t~G~~~al~~~~~~l~~~~g-d~V 158 (463)
++.+.+++.+.+.... ..+.. .-..+.+.++++.+.+....+-..+ .+++ ++++++|+..+++....-.| .+|
T Consensus 57 ~p~v~~ai~~ql~~~~-~~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~i 132 (425)
T PRK09264 57 NPVLKQALIDYLQRDG-ITHGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNI 132 (425)
T ss_pred CHHHHHHHHHHHHhcc-ccccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeE
Confidence 7789999988877521 11111 1123455556665543211111112 5656 58999999999987631223 455
Q ss_pred EEc----cCcee-------------------------cCCCc---c-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCC
Q 041151 159 VLL----FHTTW-------------------------KRQQI---G-VLIINDLQQSVAQARSKGITVRAMVIINPGNPT 205 (463)
Q Consensus 159 lvp----~g~~~-------------------------~~~~~---~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt 205 (463)
+.- +|... +.... . -|+ +.+++.+++......++.+|++.--..-.
T Consensus 133 i~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~aavi~Epv~g~~ 211 (425)
T PRK09264 133 VAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL-AYLEKLLEDSSSGVDLPAAVIVETVQGEG 211 (425)
T ss_pred EEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH-HHHHHHHHhccCCCCceEEEEEecccCCC
Confidence 553 22211 00000 0 155 78888886531111246677666444445
Q ss_pred cc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeE
Q 041151 206 GQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGG 284 (463)
Q Consensus 206 G~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G 284 (463)
|. +++.+.+++|.++|++||+++|+||++..+... + ..... ..+++ ..+ +.++||.+ +..|+++|
T Consensus 212 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt-G----~~~~~-~~~~v--~PD-----i~t~~K~l-~~~G~pig 277 (425)
T PRK09264 212 GINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRT-G----TFFSF-ERAGI--TPD-----IVTLSKSI-SGYGLPMA 277 (425)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccc-c----HHHHH-hhcCC--CCC-----EEEecccc-CCCccceE
Confidence 65 678899999999999999999999999864321 1 11111 11211 221 24779999 65599999
Q ss_pred EEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----C
Q 041151 285 YFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----C 359 (463)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 359 (463)
++++ ++++ ..+.... ..+++.++++..++.+.++ ... ...++.++.+++.+++.+.|++ .
T Consensus 278 av~~---~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~----------~~~-~~~~l~~~~~~~g~~l~~~l~~l~~~~ 342 (425)
T PRK09264 278 LVLI---KPEL-DVWKPGEHNGTFRGNNLAFVTATAALE----------EYW-SDDAFEKEVKAKGELVRERLEEIAAKY 342 (425)
T ss_pred EEEE---chhh-hccCCCccCCCCCCCHHHHHHHHHHHH----------HHH-hhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9995 6665 3433222 2356667777666655542 111 1123455556666666665544 3
Q ss_pred CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHH
Q 041151 360 RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMP 437 (463)
Q Consensus 360 pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~ 437 (463)
|.+.......|++.++.+. ... ....+...+.++||.+.++..++ ..||+++. .++++++
T Consensus 343 ~~~~~~vrg~Gl~~~i~l~--~~~-----------~~~~l~~~~~~~Gv~~~~~~~~~-----~~lr~~p~l~~t~~ei~ 404 (425)
T PRK09264 343 PGLGAEVRGRGMMQGIDFG--DGE-----------LAGKIAAEAFENGLIIETSGPED-----EVVKLLPPLTIDEEELE 404 (425)
T ss_pred CCceecceecccEEEEEec--ChH-----------HHHHHHHHHHHCCCEEeccCCCC-----CEEEEeCCCCCCHHHHH
Confidence 3221122334666675443 211 12233455677899998854332 36899977 8899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 041151 438 AIMESFKKFNDEFMEQ 453 (463)
Q Consensus 438 ~~~~~l~~~l~~~~~~ 453 (463)
+++++|.++++++.++
T Consensus 405 ~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 405 EGLDILEEAVAEVLAE 420 (425)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999887543
No 252
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.75 E-value=4.6e-16 Score=141.93 Aligned_cols=307 Identities=14% Similarity=0.164 Sum_probs=203.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
..++.+++.++... ....++.+ ....|.+.+|+.++ +....++++|++..+..+...+- ++|..|++.
T Consensus 35 TdeMr~am~eA~vg--DdVyGeD~--tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~-~rg~eii~g 102 (384)
T KOG1368|consen 35 TDEMRRAMAEASVG--DDVYGEDP--TTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCH-QRGSEIIVG 102 (384)
T ss_pred hHHHHHHHhhcccC--cccccCCc--cHHHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhc-CCCceEEec
Confidence 35666666665543 24444444 45899999999986 33478888887766666666665 799999996
Q ss_pred ----------------cCcee----cCCCcccChHHHHHHHHHHHHh--cCCceeEEEEECCCCCCc-cCCCHHHHHHHH
Q 041151 162 ----------------FHTTW----KRQQIGVLIINDLQQSVAQARS--KGITVRAMVIINPGNPTG-QCLSEANLREIL 218 (463)
Q Consensus 162 ----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~--~~~~~~~i~l~~p~NPtG-~~~s~~~l~~l~ 218 (463)
.|+.+ ++++..+|+ +++|+++..... -.+.+++|.+.|-+|-+| .++|.|++.++.
T Consensus 103 d~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~l-edIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~ 181 (384)
T KOG1368|consen 103 DRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDL-EDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK 181 (384)
T ss_pred cchheeehhccChhhhccceeEeeeeCCCCeeeH-HHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence 33333 778888999 999999984211 135789999998877777 999999999999
Q ss_pred HHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH
Q 041151 219 RFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE 298 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 298 (463)
+||+++++.+-.|-+--+-. .-....++..++..+ |. +--.+||.+ |..+|.+++ |+++++++
T Consensus 182 ~lak~~glkLH~DGARi~NA--avasgV~vk~i~~~f----DS-----VsiCLSKgl----gAPVGSViV--G~k~FI~k 244 (384)
T KOG1368|consen 182 ALAKRHGLKLHMDGARIFNA--AVASGVPVKKICSAF----DS-----VSICLSKGL----GAPVGSVIV--GSKDFIDK 244 (384)
T ss_pred HHHhccCCeeecchhhhhhH--HHHcCCCHHHHHHhh----hh-----hhhhhhccC----CCCcccEEE--ccHHHHHH
Confidence 99999999999998753211 012234555555444 22 224589987 456899998 99999998
Q ss_pred HHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--CceeEEee
Q 041151 299 IYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT--EGAMYSFP 375 (463)
Q Consensus 299 l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~--~g~~~~~~ 375 (463)
.+..+. ...+.-.....++++++. +.+.....+.-.++...+.+.++..+++++..| +.++...
T Consensus 245 A~~~RKalGGGmRQsGvLaaaaLva------------l~~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~- 311 (384)
T KOG1368|consen 245 ARHFRKALGGGMRQSGVLAAAALVA------------LDENVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM- 311 (384)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHH------------hhcchHHHHHHHHHHHHHHHHhccccceeeecchhhcceeee-
Confidence 876664 333333344444444332 111111333345566677788887766777655 4444332
Q ss_pred eccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHH-HHHHHHH
Q 041151 376 QIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESF-KKFNDEF 450 (463)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l-~~~l~~~ 450 (463)
.+.-+. .+...+ .+.++++||.+.+|..+ .+||.+. .++++++..+..+ +.++..+
T Consensus 312 ~l~q~~-----------~~~~~l-~~~~~k~gi~lm~~~s~-------r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 312 VLCQAR-----------LTAEEL-CKFLEKNGILLMGGASR-------RIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred eccccc-----------CCHHHH-HHHHHHCCeEEeecccc-------ceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 222221 123444 45678999999997654 3799998 7889999999999 4444443
No 253
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.75 E-value=3.9e-15 Score=151.35 Aligned_cols=178 Identities=16% Similarity=0.112 Sum_probs=125.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--------c
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI--------R 152 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--------~ 152 (463)
++...++++.+.+.. ....+++. ..+|++++|++++ .+.+++++|+++++..++.+++ .
T Consensus 42 ~~~~~~~a~~~~~~~---~~~~~G~~--~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~ 108 (438)
T PRK15407 42 IDAKELQNLVDASLD---FWLTTGRF--NDAFEKKLAEFLG--------VRYALLVNSGSSANLLAFSALTSPKLGDRAL 108 (438)
T ss_pred CCHHHHHHHHHHHHh---CcccCChh--HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHhhccccccCC
Confidence 466666777665554 22333332 4789999999985 2468899999999999998761 1
Q ss_pred CCCCEEEEc-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 153 GEGDGVVLL-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 153 ~~gd~Vlvp-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
+|||+|++| .|.++ ....+.+|+ +.+++.+.+ ++++|+++++ +|.. .++
T Consensus 109 ~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~-~~le~~i~~------~tkaVi~~~~---~G~p---~dl 175 (438)
T PRK15407 109 KPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDA-SLLEAAVSP------KTKAIMIAHT---LGNP---FDL 175 (438)
T ss_pred CCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCH-HHHHHHcCc------CCeEEEEeCC---CCCh---hhH
Confidence 789999997 56665 224688999 999999876 8999998864 3443 357
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC--cccCCCCCceeEEEEecCCC
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS--KGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~g~~G~R~G~~~~~~~~ 292 (463)
++|.++|++++++||+|++|+......+....++ . .+.+.||+ |.+ . ....|++++ .+
T Consensus 176 ~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~-----------g----d~~~fSf~~~k~~-~--~geGG~l~t--~d 235 (438)
T PRK15407 176 AAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF-----------G----DIATLSFYPAHHI-T--MGEGGAVFT--ND 235 (438)
T ss_pred HHHHHHHHHCCCEEEEECccchhhhcCCeeeecc-----------C----ceEEEeCCCCCCc-c--ccCceEEEE--CC
Confidence 8889999999999999999987543233222222 1 25566665 555 2 233699987 67
Q ss_pred hhHHHHHHhhhh
Q 041151 293 PKTVDEIYKIAS 304 (463)
Q Consensus 293 ~~~~~~l~~~~~ 304 (463)
+++.++++.+..
T Consensus 236 ~~l~~~~~~~~~ 247 (438)
T PRK15407 236 PLLKKIIESFRD 247 (438)
T ss_pred HHHHHHHHHHHH
Confidence 888877766544
No 254
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.75 E-value=1.5e-16 Score=154.18 Aligned_cols=172 Identities=22% Similarity=0.251 Sum_probs=136.9
Q ss_pred cHHHHHHHHHHhhhcCC--CCCccCC--CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC-
Q 041151 82 PADAIARAKHYLSLTSG--GLGAYSD--SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGD- 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~--~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd- 156 (463)
|+.+++++...+....+ ....|+. ..+....|+.||++++ .++.+|++|+|+|++++++++.+.+.+++
T Consensus 56 ~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~ 129 (428)
T KOG1549|consen 56 DPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGATESNNLVLKGVARFFGDK 129 (428)
T ss_pred CHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCchHHHHHHHHHhhcccccc
Confidence 89999999887665322 2223444 3346789999999998 77888999999999999999998755566
Q ss_pred ---EEEEc----------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHH
Q 041151 157 ---GVVLL----------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN 213 (463)
Q Consensus 157 ---~Vlvp----------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~ 213 (463)
+|++. .|..+ ......+|. +.+++.+++ +|+++.+...||-+|++++
T Consensus 130 ~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~-~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P--- 199 (428)
T KOG1549|consen 130 TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDI-SKLREAIRS------KTRLVSIMHVNNEIGVLQP--- 199 (428)
T ss_pred ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccH-HHHHHhcCC------CceEEEEEecccCcccccc---
Confidence 77774 55544 346677888 999999998 8999999999999999999
Q ss_pred HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 214 LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 214 l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+++|.++|+++++.+++|.+++.. +.+..+..+- -.++..|.+|++ |++| +|++++
T Consensus 200 v~EI~~icr~~~v~v~~DaAQavG-----~i~vDV~eln-----------~D~~s~s~HK~y-gp~~--iGaLYv 255 (428)
T KOG1549|consen 200 VKEIVKICREEGVQVHVDAAQAVG-----KIPVDVQELN-----------ADFLSISAHKIY-GPPG--IGALYV 255 (428)
T ss_pred HHHHHHHhCcCCcEEEeehhhhcC-----CccccHHHcC-----------chheeeeccccc-CCCc--ceEEEE
Confidence 777888999999999999999862 3345555442 236778999988 9999 999997
No 255
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=9e-16 Score=145.31 Aligned_cols=300 Identities=15% Similarity=0.101 Sum_probs=196.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
..+.+++++.++-.. ....|+...-...+.+.+++.++ .+.+++++++|++..+++.+.+ +||+.|++
T Consensus 12 ~~~~m~eam~~a~~~---~~~~YG~D~~~~~~e~~~ae~~g--------~~a~~Fv~sGT~aN~lal~~~~-~~~~~vi~ 79 (342)
T COG2008 12 PTPEMREALAAANAV---GDDVYGEDPTTNALEQRIAELFG--------KEAALFVPSGTQANQLALAAHC-QPGESVIC 79 (342)
T ss_pred CCHHHHHHHHhcccc---CCCCCCCCHHHHHHHHHHHHHhC--------CceEEEecCccHHHHHHHHHhc-CCCCeEEE
Confidence 378888888765422 33567766555566666666653 3889999999999999999998 89999999
Q ss_pred c-----------------cCcee---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 161 L-----------------FHTTW---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 161 p-----------------~g~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
. .|.+. +..+..+++ +.++..+...+..-..+..+++.+.+|--|.++|.+++++|.++
T Consensus 80 ~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~-e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 80 HETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTP-EDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred eccccceecccCcHHHHcCCceeccCCCCCCCcCH-HHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence 6 11222 456788999 99999888621111234555555555578999999999999999
Q ss_pred hhhCCeEEEecccccc--cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH
Q 041151 221 CYQENLVLLGDEVYQQ--NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE 298 (463)
Q Consensus 221 a~~~~~~vi~Deay~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 298 (463)
|+++++.|..|-+=-. +.. .+ ++...+...+ .++..++||.. |+.+|.+++ ++.++++.
T Consensus 159 ~k~~~l~LHmDGAR~~nA~va-lg---~~~~~~~~~~---------D~v~~~~tK~g----~~~~gAiv~--gn~~~~~~ 219 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVA-LG---VALKTIKSYV---------DSVSFCLTKGG----GAPVGAIVF--GNRDFAKR 219 (342)
T ss_pred HHHhCCceeechHHHHHHHHH-cC---CCHHHHHhhC---------CEEEEecccCC----cceeeeEEE--cCHHHHHH
Confidence 9999999999976321 111 11 3444443222 35678899975 555788888 89999999
Q ss_pred HHhhhh---hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHhhcCCCcccccC-CceeE
Q 041151 299 IYKIAS---IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRR--ARMMTDGFNSCRNVVCNFT-EGAMY 372 (463)
Q Consensus 299 l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~pg~~~~~~-~g~~~ 372 (463)
+...+. ..+.-+.+.-+....+|++ .. .+.....++ ...|.+.|+..||+++..| +.++
T Consensus 220 a~~~rK~~Ggl~~k~r~laA~~~~~l~~-----~~---------~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~- 284 (342)
T COG2008 220 ARRWRKRAGGLMRKARFLAAQGLYALED-----DV---------WRLAADHANAMAARLAEGLEAKPGVKLAFPVETNM- 284 (342)
T ss_pred HHHHHHHhcccHhhhhHHHHHHHHHHhc-----cH---------HHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccE-
Confidence 877654 2333344444444444431 11 122233444 7788888998889998775 5554
Q ss_pred EeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 373 SFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
+++ .+|...+ +.......+...|+.+.+++ ..+|+.++ .+++++++++..+++++
T Consensus 285 vf~--~l~~~~i----------~~l~~~~~~~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 285 VFV--RLPESAI----------EALRLAGALFYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred EEE--ECChHHH----------HHHHhhchhheeeeeccCCC--------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 443 3443211 11112223444455554432 25899888 88999999999888764
No 256
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.74 E-value=9e-16 Score=155.28 Aligned_cols=318 Identities=13% Similarity=0.053 Sum_probs=180.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCC-CCCcEEE-cCCcHHHHHHHHHHHhcCCC-CEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPS-DPELIFL-TDGASKGVMQTLNCVIRGEG-DGV 158 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~-t~G~~~al~~~~~~l~~~~g-d~V 158 (463)
++.+.+++.+.+.+.. .. .. .....+.+..+++.+.+....+- ..+.+++ ++++++++..+++....-.| .+|
T Consensus 53 ~p~v~~ai~~ql~~~~-~~--~~-~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~i 128 (412)
T TIGR02407 53 NPKLKQALIDYLADDG-II--HS-LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNV 128 (412)
T ss_pred CHHHHHHHHHHHhhcc-ce--ec-cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeE
Confidence 7889999988887521 11 11 11123555566666643211010 1124655 58999999999997631123 455
Q ss_pred EEc----cCcee----------cCCCcc-------------------cChHHHHHHHHHHHHhcCCceeEEEEECCCCCC
Q 041151 159 VLL----FHTTW----------KRQQIG-------------------VLIINDLQQSVAQARSKGITVRAMVIINPGNPT 205 (463)
Q Consensus 159 lvp----~g~~~----------~~~~~~-------------------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt 205 (463)
+.- +|... ....++ -++ +.+++.+.+......++.+|++.--.++.
T Consensus 129 i~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~aavi~Epi~g~~ 207 (412)
T TIGR02407 129 VSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTI-AYFEKLLEDSSSGVDLPAAVILETVQGEG 207 (412)
T ss_pred EEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHH-HHHHHHHHhccCCCCceEEEEeccccCCC
Confidence 553 22211 000000 125 77888776421111256777766557778
Q ss_pred cc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeE
Q 041151 206 GQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGG 284 (463)
Q Consensus 206 G~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G 284 (463)
|. ..+.+.+++|.++|++||+++|+||++..+.-.+ ..... ..+++ ..+ +.++||++ +..|+++|
T Consensus 208 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-----~~~a~-~~~~v--~PD-----i~~~~K~l-g~~G~pig 273 (412)
T TIGR02407 208 GINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG-----TFFSF-EPAGI--EPD-----IVCLSKSI-SGYGLPLA 273 (412)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-----hhHHh-cccCC--CCC-----EEEechhc-cCCcccee
Confidence 87 5788999999999999999999999998642111 11110 01111 221 23689999 53399999
Q ss_pred EEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCC-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 285 YFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNP-LKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
++++ ++++ +.+.... ..+++.+++...++.+.++. .. ++. ..+..+++.+.++++.+.+.+. +|++
T Consensus 274 av~~---~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~--~~~---l~~~~~~~g~~l~~~l~~l~~~---~~~~ 341 (412)
T TIGR02407 274 LTLI---KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWS--DDA---FEKAVQRKSEIIQERLDRIVAE---YPEL 341 (412)
T ss_pred EEEE---chhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhc--ccH---HHHHHHHHHHHHHHHHHHHHhh---CCCc
Confidence 9994 6665 5443222 24666777766665555421 00 011 1222222333333333333222 3333
Q ss_pred ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHH
Q 041151 363 VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIM 440 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~ 440 (463)
.......|+++|+.+. ... ....+...+.++||.+.+...+ .+.+|++.+ .+++++++++
T Consensus 342 ~~~vrg~Gl~~~l~l~--~~~-----------~~~~~~~~~~~~Gv~v~~~~~~-----~~~lr~~p~l~~t~~~i~~~~ 403 (412)
T TIGR02407 342 IKQVRGRGLMQGIECG--DGD-----------LAGKIAKAAFENGLIIETSGPN-----DEVIKLLPPLTIDEETLQQGL 403 (412)
T ss_pred eEeeecceeEEEEEec--ChH-----------HHHHHHHHHHHCCCEEeccCCC-----CCEEEEECCCCCCHHHHHHHH
Confidence 3344456788885543 221 2233445567889999874322 236999999 8999999999
Q ss_pred HHHHHHHH
Q 041151 441 ESFKKFND 448 (463)
Q Consensus 441 ~~l~~~l~ 448 (463)
++|.++++
T Consensus 404 ~~l~~~l~ 411 (412)
T TIGR02407 404 DILEQAVE 411 (412)
T ss_pred HHHHHHHh
Confidence 99999875
No 257
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1.4e-15 Score=155.26 Aligned_cols=317 Identities=14% Similarity=0.069 Sum_probs=189.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+++.+. ..+.......+.+.++++.+.+..... ..+.+++++++++|+..+++.... ...++|+.
T Consensus 74 ~p~v~~ai~~q~~~~----~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~ 148 (443)
T PRK06058 74 APRVVEAVREQVARF----THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAVENAVKIARSYTGRQAVVV 148 (443)
T ss_pred CHHHHHHHHHHHHhc----cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEE
Confidence 788999999888762 122222223466677777776543211 124788999999999999984320 12356665
Q ss_pred c----cCcee--------------------------c-CCCccc------ChHHHHHHHHHHHHh--cCCceeEEEEECC
Q 041151 161 L----FHTTW--------------------------K-RQQIGV------LIINDLQQSVAQARS--KGITVRAMVIINP 201 (463)
Q Consensus 161 p----~g~~~--------------------------~-~~~~~~------d~~~~l~~~l~~~~~--~~~~~~~i~l~~p 201 (463)
. +|... + ...+.. +.-+.+++.+....+ ...++.+|+ ..|
T Consensus 149 ~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EP 227 (443)
T PRK06058 149 FDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVI-IEP 227 (443)
T ss_pred ECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEE-ECC
Confidence 4 22211 0 000100 000111111111000 012566665 566
Q ss_pred CCCCc-cC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC
Q 041151 202 GNPTG-QC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC 279 (463)
Q Consensus 202 ~NPtG-~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 279 (463)
.+..| .+ .+.+.+++|.++|++||+++|.||++..+... +.. +.. ..+++ ..+ + .+++|.+ + .
T Consensus 228 i~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt-G~~---fa~--~~~gv--~PD---i--v~~gK~l-~-~ 292 (443)
T PRK06058 228 IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART-GAW---FAC--EHEGI--VPD---L--ITTAKGI-A-G 292 (443)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-hhh---hHH--HhcCC--CCC---E--EEEcccc-c-C
Confidence 66655 33 45778999999999999999999999876431 111 111 11211 221 2 3458999 6 7
Q ss_pred CceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041151 280 GQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS 358 (463)
Q Consensus 280 G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 358 (463)
|+++|+++ +++++.+.+..... .+++.+++++.++.+.|+ .++ .+++.++.+++.+++.+.|++
T Consensus 293 G~Pi~av~---~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~~~-~~~l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 293 GLPLSAVT---GRAEIMDAPHPGGLGGTYGGNPVACAAALAAIE-----------TIE-EDDLVARARQIEALMTDRLRA 357 (443)
T ss_pred CCccEEEE---EcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH-----------HHH-HcCHHHHHHHHHHHHHHHHHH
Confidence 99999999 58888888765433 578889999999988874 222 124566677777777777766
Q ss_pred C----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 359 C----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 359 ~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
+ +.+.-+.+.|.++.+.-..-+.. .++ ...+...+.++||.+.++..|+ +++|+..+
T Consensus 358 l~~~~~~i~~vrg~G~~~~i~~~~~~~~----------~~~~~~~~~l~~~~~~~Gv~~~~~~~~~-----~~lr~~Ppl 422 (443)
T PRK06058 358 LAAEDDRIGDVRGRGAMIAIELVKPGTT----------EPDAELTKALAAAAHAAGVIVLTCGTYG-----NVIRLLPPL 422 (443)
T ss_pred HHhhCCcEEeeeccceEEEEEEecCCCC----------CCcHHHHHHHHHHHHHCCeEEeccCCCC-----CEEEEECCC
Confidence 3 22222456676665421111000 011 1223344567899999876554 27999766
Q ss_pred -CCcCcHHHHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~l~~ 449 (463)
.+++++++++++|.+++++
T Consensus 423 ~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 423 VIGDELLREGLDVLEAALAD 442 (443)
T ss_pred ccCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999865
No 258
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.73 E-value=1.2e-16 Score=154.83 Aligned_cols=207 Identities=18% Similarity=0.176 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----c--CC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----K--RQ 169 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~--~~ 169 (463)
+.++++.+|++++ . .+.+++|+|+++++..++.+++ +|||+|+++ .|+++ + ..
T Consensus 61 i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~-~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 61 IKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVC-GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 6788899999885 2 2455569999999999999998 899999997 55554 2 12
Q ss_pred C----cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccccc-ccCCCCC
Q 041151 170 Q----IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQN-IYQDERP 244 (463)
Q Consensus 170 ~----~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~-~~~~~~~ 244 (463)
. ..+|+ +.+++++++ .+++++|++++| ||||.+++ +++|+++|+++|++||+||+|... .|. +..
T Consensus 133 ~~~~~~~i~~-~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~-~~~ 202 (294)
T cd00615 133 YYGIAGGIPP-ETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFH-PIL 202 (294)
T ss_pred ccCcCCCCCH-HHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccC-ccc
Confidence 2 37899 999999875 126899999999 78999987 778888999999999999999753 342 211
Q ss_pred ccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh--hcccCChHHHHHHHHhcC
Q 041151 245 FVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS--IALSPNVPAQIFMGLMVN 322 (463)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~ 322 (463)
+.+. ...+..+++.|++|++ +|++.|+++..+......+++..... .+.+++.+...++..++.
T Consensus 203 ~~~~-----------~~~~~div~~S~hK~l---~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~ 268 (294)
T cd00615 203 PSSA-----------AMAGADIVVQSTHKTL---PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARA 268 (294)
T ss_pred Ccch-----------hhcCCcEEEEchhccc---chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHH
Confidence 1122 1123569999999987 57776555431111112334443332 123333333333333321
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 323 PLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
....+.++..+++.++.+.+++.|+
T Consensus 269 ----------~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 269 ----------MMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred ----------HHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 1122233455566666667776664
No 259
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=1.5e-15 Score=152.78 Aligned_cols=300 Identities=12% Similarity=0.075 Sum_probs=186.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----CCC-
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----GEG- 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~g- 155 (463)
++.+.+++.+.+.+. .+.+. ....++..++++++.+. ...+.+++++++++|+..+++.... ++|
T Consensus 54 ~p~v~~a~~~q~~~~---~~~~~--~~~~~~~~~la~~l~~~----~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r 124 (395)
T PRK03715 54 NPGMVEALAAQAEKL---INPSP--AFYNEPMAKLAGLLTQH----SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGA 124 (395)
T ss_pred CHHHHHHHHHHHHhc---ccccc--cccCHHHHHHHHHHhhc----cCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCC
Confidence 678899998887752 12222 23456788889988643 2246899999999999999998741 123
Q ss_pred CEEEEc----cCcee----------------c-CCCc----ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC-
Q 041151 156 DGVVLL----FHTTW----------------K-RQQI----GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL- 209 (463)
Q Consensus 156 d~Vlvp----~g~~~----------------~-~~~~----~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~- 209 (463)
..|+.. +|... + ..++ -.|+ +.+++.+.+ ++.+|++...++..|...
T Consensus 125 ~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~------~~aavi~Epv~~~gG~~~~ 197 (395)
T PRK03715 125 YEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDI-ASVEKLITD------KTVAVMLEPVQGEGGVIPA 197 (395)
T ss_pred cEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchH-HHHHHHcCC------CceEEEEeCCcCCCCCccC
Confidence 345443 23221 0 0011 1366 888888765 678877775566666654
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEec
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMT 289 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 289 (463)
+.+.+++|.++|++||+++|+||++..+.- . ...... ..+++ .. -+.++||.+ | .|+.+|.++
T Consensus 198 ~~~~l~~l~~l~~~~~~llI~DEv~tG~GR---t--G~~~a~-~~~gv--~P-----Di~t~gK~l-g-~G~p~~av~-- 260 (395)
T PRK03715 198 TREFMQQLRALTKQHGLLLIVDEVQTGCGR---T--GTLFAY-ELSGI--EP-----DIMTLGKGI-G-GGVPLAALL-- 260 (395)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCC---C--cchhhH-hhcCC--CC-----ceeeehhhh-h-CCcceEEEE--
Confidence 688899999999999999999999986421 1 111111 11211 11 136889999 5 578899998
Q ss_pred CCChhHHHHHHh-hhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccc
Q 041151 290 NIPPKTVDEIYK-IASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---RNVVCN 365 (463)
Q Consensus 290 ~~~~~~~~~l~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---pg~~~~ 365 (463)
+++++.. +.. ....+++.+++...++.+.|+ .++ .++++++.+++-+++.+.|+++ .++...
T Consensus 261 -~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~-----------~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v 326 (395)
T PRK03715 261 -AKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVIS-----------QLL-APGFLEGVRARGEYLKEKLLELSEERGLEGE 326 (395)
T ss_pred -Ecccccc-ccCCCcCCCCCCCHHHHHHHHHHHH-----------HHH-hccHHHHHHHHHHHHHHHHHHHhhcCCcCeE
Confidence 4666642 221 122355667777776766653 222 2346677777777787777653 134333
Q ss_pred cCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc---CeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHH
Q 041151 366 FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT---GISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIM 440 (463)
Q Consensus 366 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~ 440 (463)
...| .++- +++... ....+...+.+. ||.+.+.. ...+|++.. .+++|+++++
T Consensus 327 rG~G-lm~~--i~l~~~------------~~~~~~~~~~~~~~~Gi~~~~~~-------~~~lR~~p~l~~t~~ei~~~~ 384 (395)
T PRK03715 327 RGEG-LLRA--LLLGKD------------IGPQIVEKARDMQPDGLLLNAPR-------PNLLRFMPALNVTTEEIDQMI 384 (395)
T ss_pred Ecce-eEEE--EEecCc------------hHHHHHHHHHhccCCCEEEeecC-------CCEEEEeCCcccCHHHHHHHH
Confidence 3333 3333 332211 112233334445 99986521 136999999 8999999999
Q ss_pred HHHHHHHHHH
Q 041151 441 ESFKKFNDEF 450 (463)
Q Consensus 441 ~~l~~~l~~~ 450 (463)
++|+++++++
T Consensus 385 ~~l~~~l~~~ 394 (395)
T PRK03715 385 AMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 260
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=3.5e-15 Score=150.99 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=104.7
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~~~ 170 (463)
...|++.+|++.+ .+..+++++++.|+..++.+++ ++||+|+++ + |+++ ..++
T Consensus 71 ~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all-~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd 141 (436)
T PRK07812 71 QDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLA-GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVED 141 (436)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECC
Confidence 4577888887764 3446777777889999999998 899999986 2 2333 1111
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
..|+ +.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.... ..++ .
T Consensus 142 -~~d~-e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-----~~pl-~ 204 (436)
T PRK07812 142 -PDDL-DAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-----IRPL-E 204 (436)
T ss_pred -CCCH-HHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----CCch-h
Confidence 2377 999988876 8999999999999999988 67778888899999999999875322 1111 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
. +. .+++.|++|.+ |..|--+|.+++
T Consensus 205 ~--------Ga---Divv~S~tK~l-gg~G~~i~G~vv 230 (436)
T PRK07812 205 H--------GA---DIVVHSATKYL-GGHGTAIAGVIV 230 (436)
T ss_pred c--------CC---CEEEEeccccc-CCCCCeEEEEEE
Confidence 1 12 27789999999 656666777765
No 261
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=4.5e-15 Score=150.63 Aligned_cols=143 Identities=13% Similarity=0.162 Sum_probs=105.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------cCCC------cc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------KRQQ------IG 172 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------~~~~------~~ 172 (463)
...|++.+|++.+ .+..++++++++++..++.+++ +|||+|+++ ++... ...+ ..
T Consensus 65 ~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all-~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLL-QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4678888888864 3447777888999999999998 899999997 33221 0011 11
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
.|. +.+++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|+.... ..++ .
T Consensus 136 ~d~-~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~-----~~pl-~-- 197 (427)
T PRK05994 136 DDP-ASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL-----IRPI-E-- 197 (427)
T ss_pred CCH-HHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc-----CCcc-c--
Confidence 277 999998876 8999999999999999987 67888889999999999999975322 1111 1
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+ . -.+++.|++|.+ |.+|-.+|.+++
T Consensus 198 --~----g---aDivv~S~tK~l-gg~~~~~gG~v~ 223 (427)
T PRK05994 198 --H----G---ADIVVHSLTKFL-GGHGNSMGGIIV 223 (427)
T ss_pred --c----C---CcEEEEcCcccc-CCCCCcEEEEEE
Confidence 1 1 238899999998 656655666554
No 262
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.72 E-value=8.7e-16 Score=145.09 Aligned_cols=315 Identities=13% Similarity=0.087 Sum_probs=214.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCcc----CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAY----SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y----~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 156 (463)
.+.+.+++.+.+..++....+- +.+.-...|.+++|++.+ .+.-++.+++.-|....+..|.+ -||=
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsSCfVANDstLftLak~lpgc 258 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSSCFVANDSTLFTLAKKLPGC 258 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------CcceeeeeeeeeccchHHHHHHHHCCCc
Confidence 7899999999999875433332 234445689999999985 34455555566666666666542 3777
Q ss_pred EEEEc--------cCcee---cCCCccc-ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 157 GVVLL--------FHTTW---KRQQIGV-LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 157 ~Vlvp--------~g~~~---~~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
+|+-+ .|++- +..-|.. |+ ++|++.++..+.. .+|.|-+.+.+..+|.+.+ +++|++++++|
T Consensus 259 ei~SD~gNHASMI~GIrns~v~K~IFrHND~-~hL~~lL~~~~~s--vPKivAFEtVhSM~Gavcp---leelcDvah~y 332 (570)
T KOG1360|consen 259 EIFSDEGNHASMIQGIRNSRVPKHIFRHNDL-DHLEQLLQSSPKS--VPKIVAFETVHSMDGAVCP---LEELCDVAHKY 332 (570)
T ss_pred EEeccccchHHHHHHhhhcCCcceeeccCCH-HHHHHHHHhCCCC--CCceEEEeeeeccCCCcCC---HHHHHHHHHHh
Confidence 77776 33332 3334444 55 9999999876444 6799999999999999999 77788899999
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS 304 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 304 (463)
|.+-++||+|+...|+ .... .+.+. +++ -.. -.|.-+++.|+| |.-| ||+. +...+++.++.+..
T Consensus 333 GAiTFlDEVHAVGlYG-~rGa-Gvger-dGv----m~k-vDiIsGTLgKaf-GcVG---GYIA---at~~LvDmiRSyAa 397 (570)
T KOG1360|consen 333 GAITFLDEVHAVGLYG-PRGA-GVGER-DGV----MHK-VDIISGTLGKAF-GCVG---GYIA---ATRKLVDMIRSYAA 397 (570)
T ss_pred Cceeeeehhhhhcccc-CCCC-Ccccc-CCc----chh-hhhcccchhhhc-cccc---ceeh---hhhhHHHHHHHhcC
Confidence 9999999999998884 2221 11110 000 111 236779999999 6656 9998 79999999999875
Q ss_pred -hcccCC--hHHHHHHHHhcCCCCCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccC
Q 041151 305 -IALSPN--VPAQIFMGLMVNPLKPGDISYEQFVR--ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRL 379 (463)
Q Consensus 305 -~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~ 379 (463)
..++++ +.....+..+++ +++ +-+.+|+..+++-.++++.|.+. |+.+++...-.. -+.+.-
T Consensus 398 GFIFTTSLPP~vl~GAleaVr-----------~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHIi-Pv~vgd 464 (570)
T KOG1360|consen 398 GFIFTTSLPPMVLAGALEAVR-----------ILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHII-PVRVGD 464 (570)
T ss_pred ceEEecCCChHHHHhHHHHHH-----------HHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccee-eeeccC
Confidence 333333 222222222221 222 23557778888899999999998 888876444332 222321
Q ss_pred ChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 380 PPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+. -..+.+..|+.++||+|-.-.....+.|...+||... .+++.++.+++.|.++-.++
T Consensus 465 a~------------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 465 AA------------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HH------------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11 1456678899999999987665556667778999988 78788888888887776553
No 263
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.70 E-value=6.8e-15 Score=144.46 Aligned_cols=272 Identities=13% Similarity=0.135 Sum_probs=176.0
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------cC-----C-Ccc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------KR-----Q-QIG 172 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------~~-----~-~~~ 172 (463)
...|.++++.+- ..+..+.+++++.||..++.+++ ++||+|+++ ||... .. . -..
T Consensus 65 ~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll-~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~ 135 (396)
T COG0626 65 RDALEEALAELE--------GGEDAFAFSSGMAAISTALLALL-KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP 135 (396)
T ss_pred HHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhc-CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC
Confidence 456777777765 36788888989999999999998 899999998 55443 00 0 111
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
.+. +.+++++.+. ++|+|++.+|+|||-.+.+ +.+|+++|+++++++++|+.|+...+. . ++ .
T Consensus 136 ~~~-~~~~~~~~~~-----~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q---~--PL-~-- 198 (396)
T COG0626 136 GDD-EALEAAIKEP-----NTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ---R--PL-E-- 198 (396)
T ss_pred CCh-HHHHHHhccc-----CceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc---C--hh-h--
Confidence 233 5666666531 7999999999999988866 888888999999999999999876551 1 11 1
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh--hcccCChHHHHHHHHhcCCCCCCCch
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS--IALSPNVPAQIFMGLMVNPLKPGDIS 330 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~ 330 (463)
+ +. .|+++|.+|.+.|...+=.|.++. .++++.+.+..... .....++.....+..-++
T Consensus 199 --~----Ga---DIVvhSaTKyl~GHsDvl~G~v~~--~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-------- 259 (396)
T COG0626 199 --L----GA---DIVVHSATKYLGGHSDVLGGVVLT--PNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR-------- 259 (396)
T ss_pred --c----CC---CEEEEeccccccCCcceeeeEEec--ChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc--------
Confidence 1 22 389999999998888888886663 34556666533333 334444444444444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccC-----------------CceeEEeeeccCChhhHHHHhhcCC
Q 041151 331 YEQFVRESKGILESLRRRARMMTDGFNSCRNVV-CNFT-----------------EGAMYSFPQIRLPPKAIEAAKRAGK 392 (463)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~-----------------~g~~~~~~~~~~~~~~~~~~~~~~~ 392 (463)
.+.-+.++..++...+.+.|++.|.++ ++.| -||++.+ ++..
T Consensus 260 ------TL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf---~l~~----------- 319 (396)
T COG0626 260 ------TLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSF---ELKN----------- 319 (396)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEE---EeCC-----------
Confidence 233345567778888999998876654 3333 3455554 3322
Q ss_pred CChHHHHHHHHHhcCeEe---eCCCCCCC------------C--------CCCcEEEEEecCCcCcHHHHHHHHHHHHHH
Q 041151 393 VPDVFYCLRLLEATGIST---VPGSGFGQ------------K--------EGIFHLRTTILPAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 393 ~~~~~~~~~ll~~~gI~v---~pg~~f~~------------~--------~~~~~lRis~~~~~e~i~~~~~~l~~~l~~ 449 (463)
. +.+.+.++.-.+.. .-|..... + -..+.+|+|++. |+.+.+++-|++++++
T Consensus 320 --~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 320 --E-EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK 394 (396)
T ss_pred --h-HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence 1 22334444433332 23322211 0 014589999996 5778888888888765
Q ss_pred H
Q 041151 450 F 450 (463)
Q Consensus 450 ~ 450 (463)
.
T Consensus 395 ~ 395 (396)
T COG0626 395 A 395 (396)
T ss_pred h
Confidence 3
No 264
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=1.2e-14 Score=144.69 Aligned_cols=198 Identities=10% Similarity=0.088 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee-cCCCc
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW-KRQQI 171 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~-~~~~~ 171 (463)
..|.+.||+.- ..+..+++++++.|+..++.+++ ++||+|+++ .|+++ ..+
T Consensus 65 ~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll-~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd-- 133 (395)
T PRK08114 65 FSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFV-EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD-- 133 (395)
T ss_pred HHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHc-CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC--
Confidence 46777777654 35678888889999999999998 899999997 23333 111
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC--CeEEEecccccccccCCCCCccchH
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE--NLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~--~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
..|. +.+++++++ ++|+|++.+|+||||.+.+ +++|+++|+++ ++++++|.+|+.... ....
T Consensus 134 ~~d~-~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~------~~pl 197 (395)
T PRK08114 134 PLIG-ADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL------FKAL 197 (395)
T ss_pred CCCH-HHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc------cCHH
Confidence 2467 889999887 8999999999999999987 77888888897 499999999975322 1121
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCC
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGD 328 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 328 (463)
.+ +-.|+++|.+|+++|...+-.|.++ .+++..+.+..... .....++.....+..-|+
T Consensus 198 ~~-----------GaDivv~S~tKyl~Ghsdv~~G~v~---~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~------ 257 (395)
T PRK08114 198 DF-----------GIDISIQAGTKYLVGHSDAMIGTAV---ANARCWEQLRENSYLMGQMVDADTAYMTSRGLR------ 257 (395)
T ss_pred Hc-----------CCcEEEEcCcccccCCCcceeEEEE---cCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC------
Confidence 11 2248999999999776668889776 57777676665443 333444444443334333
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 329 ISYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
.+.-+.++..++...+.+.|++.|.+
T Consensus 258 --------TL~lR~~~~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 258 --------TLGVRLRQHEESSLKVAEWLAEHPEV 283 (395)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 22234556778888899999887654
No 265
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=2.5e-15 Score=152.93 Aligned_cols=310 Identities=14% Similarity=0.115 Sum_probs=186.3
Q ss_pred cHHHHHHHHHHhhhcCCCCC-ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-C
Q 041151 82 PADAIARAKHYLSLTSGGLG-AYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-E 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~ 154 (463)
++.+.+++.+++........ .|. .+.+.++|+.+.+... -..+.+++++++++|+..+++.... . +
T Consensus 60 ~p~v~~ai~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~ 132 (423)
T PRK05964 60 HPYIDQAIREQLDRLDHVIFAGFT-----HEPAERLAQRLVALTP--GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEP 132 (423)
T ss_pred CHHHHHHHHHHHhhCCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 67899999888876211111 121 2455566666654321 1236899999999999999986520 1 3
Q ss_pred C-CEEEEc----cCcee-----c-----CC-------C-----cc-cC-----hHHHHHHHHHHHHhcCCceeEEEEEC-
Q 041151 155 G-DGVVLL----FHTTW-----K-----RQ-------Q-----IG-VL-----IINDLQQSVAQARSKGITVRAMVIIN- 200 (463)
Q Consensus 155 g-d~Vlvp----~g~~~-----~-----~~-------~-----~~-~d-----~~~~l~~~l~~~~~~~~~~~~i~l~~- 200 (463)
| .+|+.- +|... . .. + +. -| . +.+++.+.+. +.++.+|++..
T Consensus 133 ~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~l~~~l~~~---~~~iaavi~Ep~ 208 (423)
T PRK05964 133 GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL-DALEALLEKH---AGEIAAFIVEPL 208 (423)
T ss_pred CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH-HHHHHHHHhC---CCcEEEEEEecc
Confidence 3 355553 22111 0 00 0 00 02 5 7777777642 12567776654
Q ss_pred CCCCCccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC
Q 041151 201 PGNPTGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC 279 (463)
Q Consensus 201 p~NPtG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 279 (463)
.++..|... +.+.+++|.++|++||+++|+||++..+... +. .+.. ..+++ . .-+.++||++ +.+
T Consensus 209 i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~-G~---~~a~--~~~~v--~-----pDi~~~~K~l-~gG 274 (423)
T PRK05964 209 VQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT-GT---LFAC--EQAGV--S-----PDIMCLSKGL-TGG 274 (423)
T ss_pred cccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC-cc---hhHH--HhcCC--C-----CCeeeeehhh-hcC
Confidence 466677655 8999999999999999999999999775331 11 1111 11111 1 1235789999 544
Q ss_pred CceeEEEEecCCChhHHHHHHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 041151 280 GQRGGYFEMTNIPPKTVDEIYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMM 352 (463)
Q Consensus 280 G~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (463)
++++|+++ +++++.+.+... ...+++.+++...++.+.++ .++ .+.+.++..++-+.+
T Consensus 275 ~~p~~av~---~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~-----------~l~-~~~~~~~~~~~g~~l 339 (423)
T PRK05964 275 YLPLAATL---CTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD-----------LFE-DEPVLERVAALSAGL 339 (423)
T ss_pred cccceEEE---EcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH-----------HHH-hcCHHHHHHHHHHHH
Confidence 48999988 589998888532 12345567788777777653 111 123455566666667
Q ss_pred HHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 353 TDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 353 ~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
.+.|+++ |.+.-....|.+ +.+.+..+.. ......+...|.++||.+.+.. +.+|++.
T Consensus 340 ~~~l~~l~~~~~i~~vrg~Gl~-~~i~l~~~~~----------~~~~~~l~~~l~~~Gv~v~~~~--------~~lR~~p 400 (423)
T PRK05964 340 AEGLEPFRDLPGVADVRVLGAI-GAVELDRPVL----------ERDGPALRAFALERGVLLRPLG--------NTIYLMP 400 (423)
T ss_pred HHHHHhhccCCCeEEeecccEE-EEEEeccCcc----------hhHHHHHHHHHHHCCeEEEecC--------CEEEEeC
Confidence 7766654 333222333433 3322321110 0012334455678899998731 2699998
Q ss_pred c--CCcCcHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
. .+++||++++++|+++++++
T Consensus 401 ~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 401 PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CcccCHHHHHHHHHHHHHHHhhC
Confidence 8 89999999999999998763
No 266
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=1.5e-14 Score=146.69 Aligned_cols=141 Identities=14% Similarity=0.168 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---c--------------Ccee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---F--------------HTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~--------------g~~~-~~~~ 170 (463)
..+|++.+|++.+ .+..++|+++++|+..++.+++ ++||+|+++ + |+++ .-+.
T Consensus 66 ~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll-~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEG--------GVGAIATASGQAALHLAIATLM-GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 5688888888874 2346889999999999999988 899999997 2 3333 1111
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
-|+ +.+++++++ ++|+|++.+|+||+|.+.+ +++|+++|+++++++|+|.+++.... ..++ .
T Consensus 137 --~d~-~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~-----~~pl-~ 198 (433)
T PRK08134 137 --GDI-DGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL-----LRPF-E 198 (433)
T ss_pred --CCH-HHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-----CCch-h
Confidence 177 999999987 8999999999999999988 77788888899999999999875432 1121 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+ + -.+++.|.+|.+ +.+|-.+|.+++
T Consensus 199 ~--------G---aD~vv~S~tK~l-~g~g~~~gG~v~ 224 (433)
T PRK08134 199 H--------G---ADLVYHSATKFL-GGHGTAIGGVLV 224 (433)
T ss_pred c--------C---CCEEEecccccc-CCCCCceEEEEE
Confidence 1 1 238899999998 767877777765
No 267
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=6.8e-14 Score=136.62 Aligned_cols=300 Identities=14% Similarity=0.158 Sum_probs=190.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
-...++++.+.+.+ .+...++ -..++.+++++|++ ....+.+++++.|+.+++++|.-+|||+|++|
T Consensus 14 ~~~e~~~v~~vl~s---g~i~~G~--~v~~FE~~~ae~~G--------~k~ava~~sgT~AL~laL~al~ig~GDeVI~p 80 (374)
T COG0399 14 GEEELAAVQEVLKS---GWLTGGP--FVRRFEQAFAEYLG--------VKYAVAVSSGTAALHLALLALAIGPGDEVIVP 80 (374)
T ss_pred chHHHHHHHHHHHc---CCeecCh--HHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhcCCCCCCEEEec
Confidence 56777788888877 3333343 34789999999975 56677777779999999996533899999998
Q ss_pred -------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh
Q 041151 162 -------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 -------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|.++ ..+.+.+|. +.+|++|++ ++|+|+..+- -|...+ +++|.++|++
T Consensus 81 s~TfvATan~i~~~Ga~PVFvDid~~T~nid~-~~ie~aIt~------~tKAIipVhl---~G~~~d---m~~i~~la~~ 147 (374)
T COG0399 81 SFTFVATANAVLLVGAKPVFVDIDPDTLNIDP-DLIEAAITP------RTKAIIPVHL---AGQPCD---MDAIMALAKR 147 (374)
T ss_pred CCchHHHHHHHHHcCCeEEEEecCCcccCCCH-HHHHHHccc------CCeEEEEehh---ccCCCC---HHHHHHHHHH
Confidence 77777 456799999 999999998 8999986633 344444 7777778889
Q ss_pred CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC--cccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 224 ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS--KGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
||++||+|.+++...-..++...++ + .+.+.||. |.+ . +| -.|.+++ .++++.++++.
T Consensus 148 ~~l~vIEDaAqa~Ga~y~gk~vGt~-----------G----d~~~fSF~~~K~i-t-tg-EGGav~t--nd~ela~k~~~ 207 (374)
T COG0399 148 HGLPVIEDAAQAHGATYKGKKVGSF-----------G----DIGAFSFHATKNL-T-TG-EGGAVVT--NDEELAEKARS 207 (374)
T ss_pred cCCeEEEEcchhccCeecCcccccc-----------c----ceEEEEecCCCCc-c-cc-CceEEEe--CCHHHHHHHHH
Confidence 9999999999987643244443333 1 25666664 777 4 44 6888887 67889998887
Q ss_pred hhhhcccC-------------C-hHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 041151 302 IASIALSP-------------N-VPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT 367 (463)
Q Consensus 302 ~~~~~~~~-------------~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~ 367 (463)
++..+... + .+.-..++..+ ..++.++++.++-++..+...+.|++++++.+...
T Consensus 208 lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl-----------~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~ 276 (374)
T COG0399 208 LRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGL-----------AQLERLDEINERRREIAQIYAEALKGLPGITLPPE 276 (374)
T ss_pred HHHhCcCCCccccceeeecccccCHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Confidence 65422211 1 11111222221 12344445555555666677777887766554332
Q ss_pred -Cce---eEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCe----EeeCCCCC------C-----CCC-----CCc
Q 041151 368 -EGA---MYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGI----STVPGSGF------G-----QKE-----GIF 423 (463)
Q Consensus 368 -~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI----~v~pg~~f------~-----~~~-----~~~ 423 (463)
.+. ++++. +.++.. ..+.+.+...|++.|| ...|.... + ..+ ...
T Consensus 277 ~~~~~~~~~~~~-i~~~~~----------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r 345 (374)
T COG0399 277 PDGAVHAWHLYT-ILVDEE----------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSER 345 (374)
T ss_pred CCCceeeeeeeE-EEecCC----------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhC
Confidence 222 32221 122210 0134456677888854 44452222 0 001 123
Q ss_pred EEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 424 HLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 424 ~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
.+.+-+. .+++++++.++.|++++.+
T Consensus 346 ~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 346 ILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred eEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 4666555 7889999999999988753
No 268
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.68 E-value=1e-14 Score=145.07 Aligned_cols=293 Identities=16% Similarity=0.171 Sum_probs=184.5
Q ss_pred CcHHHHHHHHHHhhhcC-CCCCccCCC-------CCCHHHHHHHHHHHHHhcCCCC-CCCcEEEcCC-cHHHHHHHHHHH
Q 041151 81 FPADAIARAKHYLSLTS-GGLGAYSDS-------RGIPGVRKEVAEFIERRDGYPS-DPELIFLTDG-ASKGVMQTLNCV 150 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~-~~~~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~t~G-~~~al~~~~~~l 150 (463)
.|+.+++++.+.+.++. .....|... +-+.+.|+.++++++ . ++++|++|+| +|++++.++..+
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~------~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN------IPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHHhc
Confidence 38999999988775431 122223222 224577888888875 4 4568999988 999999999999
Q ss_pred hcC---CCCEEEEc------------cCcee---c-CCCccc-ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 151 IRG---EGDGVVLL------------FHTTW---K-RQQIGV-LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 151 ~~~---~gd~Vlvp------------~g~~~---~-~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
+ . +|+.|++- .|.++ . ...... +..+..+..+++ ++++|.+++.+|.||..++
T Consensus 84 ~-~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 84 L-GDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAP------DAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred C-CCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCC------CCCEEEEeCCcccccEEcc
Confidence 7 6 56666553 35544 2 222112 320323233333 7999999999999999743
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
++++.+|+++++|.+.+.... +..+..+ + +.+.|..|.+ |++| +|.+++
T Consensus 157 --------~i~~~~g~~~~VDa~qs~g~~-----~idv~~~-----------~--~~~ss~~K~l-GP~G--~g~l~~-- 205 (355)
T cd00611 157 --------EVPDTGGVPLVADMSSNILSR-----PIDVSKF-----------G--VIYAGAQKNL-GPAG--VTVVIV-- 205 (355)
T ss_pred --------eecccCCCeEEEEccccccCC-----CCCHHHh-----------C--EEEeeccccc-CCCc--eEEEEE--
Confidence 244569999999999986432 3344332 1 4567789988 8888 788885
Q ss_pred CChhHHHHHHhh-----------hh--hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 041151 291 IPPKTVDEIYKI-----------AS--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDG 355 (463)
Q Consensus 291 ~~~~~~~~l~~~-----------~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ 355 (463)
++++++++... .. ...+++.....++.++++ ...++ .+.+.++.++..+++++.
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~----------~l~~~gg~e~i~~~~~~l~~~l~~~ 274 (355)
T cd00611 206 -RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLK----------WLKEQGGVEAMEKRNRQKAQLLYDT 274 (355)
T ss_pred -CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHH----------HHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 77777655421 11 123444445555555553 22232 567888899999999999
Q ss_pred hhcCCCcc-cc-cC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 356 FNSCRNVV-CN-FT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 356 L~~~pg~~-~~-~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
|+++||+. .. .+ ..+..+. +.++... .+.++ ...+.++|+.+.++.. . .+.+|+|+.
T Consensus 275 l~~~~gl~~~~~~~~~rs~~vvs--f~~~~~~----------l~~~~-~~~~~r~G~~~~~~~~--~---~g~vR~S~~~ 336 (355)
T cd00611 275 IDNSNGFYRGPVDKRARSRMNVP--FRLGKEE----------LEKEF-LKEAEAAGMIGLKGHR--S---VGGIRASIYN 336 (355)
T ss_pred HHhCccccccCCCHHHcCceEEE--EEcCChh----------hhHHH-HHHHHHCCCcccCCCc--c---cCeEEEEccC
Confidence 99998862 21 11 2222222 2322100 01222 2356778997555543 1 137999999
Q ss_pred -CCcCcHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKF 446 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~ 446 (463)
++.+|++++++.|+++
T Consensus 337 ~nt~edi~~l~~al~~~ 353 (355)
T cd00611 337 ALSLEGVQALADFMKEF 353 (355)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 7999999999999875
No 269
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.67 E-value=4.4e-14 Score=139.65 Aligned_cols=297 Identities=15% Similarity=0.147 Sum_probs=191.8
Q ss_pred CcHHHHHHHHHHhhhcCC-CCCccCCCCCCH---HHHHHHHHHHHHhcCCCCCCCcEEEcCC-cHHHHHHHHHHHhcCCC
Q 041151 81 FPADAIARAKHYLSLTSG-GLGAYSDSRGIP---GVRKEVAEFIERRDGYPSDPELIFLTDG-ASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~-~~~~Y~~~~g~~---~lr~~ia~~~~~~~g~~~~~~~i~~t~G-~~~al~~~~~~l~~~~g 155 (463)
.|..+++++.+.+.++.. ....|....-.+ ++-+.+.+.+....+.+ +.++|++++| ++.+++.++..++ .+|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCC
Confidence 388999999998885431 233333332233 33333333444333421 2346888766 9999999999998 799
Q ss_pred CEEEEc---------------cCcee---c-C----CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 156 DGVVLL---------------FHTTW---K-R----QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 156 d~Vlvp---------------~g~~~---~-~----~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
+++++. +|. + . . .+..+|+ +.++. ++ ++++|.+++..|.||...+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~--~~------~~~~v~~th~ETstGv~~~-- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDP-STWEI--SE------DAAYVHYCANETIHGVEFR-- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCH-HhcCC--CC------CCCEEEEcCCCCcccEecc--
Confidence 988876 555 3 2 1 2234555 54442 22 7899999999999999765
Q ss_pred HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 292 (463)
++++.+++++++|.+.+.... +..+.. .+ +++.|..|++ |+|| +|.+++ +
T Consensus 149 ------~l~~~~~~l~iVDavss~g~~-----~id~~~-----------~d--~~~~ssqK~l-gP~G--lg~l~~---s 198 (349)
T TIGR01364 149 ------ELPDVKNAPLVADMSSNILSR-----PIDVSK-----------FG--LIYAGAQKNI-GPAG--LTVVIV---R 198 (349)
T ss_pred ------eecccCCCeEEEEccccccCc-----cCCHHH-----------cc--EEEEeccccc-CCCc--eEEEEE---C
Confidence 456678999999999886322 234332 22 7889999998 8998 788885 7
Q ss_pred hhHHHHHHhh----------h--h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhh
Q 041151 293 PKTVDEIYKI----------A--S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 293 ~~~~~~l~~~----------~--~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~ 357 (463)
++.++++... . . ...+++.....++.++|+ ...++ ++.+.++.++..+++++.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~----------~l~~~gG~e~i~~r~~~l~~~l~~~l~ 268 (349)
T TIGR01364 199 KDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFK----------WLKEQGGVKAIEKRNQAKAQLLYDTID 268 (349)
T ss_pred HHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHH----------HHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 7777655221 1 1 123555555566666653 22333 67788899999999999999
Q ss_pred cCCCccccc--C--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 358 SCRNVVCNF--T--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 358 ~~pg~~~~~--~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
+++|+.... + ..+..+. +..|... .+.++ ...+.++|+.+.+|... . +.+|+|+. +
T Consensus 269 ~~~gl~~~~~~~~~rs~~v~s--f~~~~~~----------~~~~~-~~~~~~~Gi~~~~~~~~---~--g~vRvS~~~~n 330 (349)
T TIGR01364 269 NSNGFYRNPVDPRNRSRMNVV--FTLGNEE----------LEKRF-LKEAEERGLVSLKGHRS---V--GGMRASIYNAM 330 (349)
T ss_pred hCCCeeccCCCHHHcCCeEEE--EecCChh----------HhHHH-HHHHHHCCCcccCCccc---c--CeeEEECcCCC
Confidence 997764332 1 1222222 2333210 12332 34677899977666541 1 37999999 7
Q ss_pred CcCcHHHHHHHHHHHHHH
Q 041151 432 AEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~~ 449 (463)
+.+|++.+++.|++++++
T Consensus 331 t~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 331 PLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999987764
No 270
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.67 E-value=2.2e-14 Score=156.33 Aligned_cols=290 Identities=12% Similarity=0.026 Sum_probs=182.8
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCC--cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----------------cCcee---c
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQTLNCVIRGEGDGVVLL----------------FHTTW---K 167 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp----------------~g~~~---~ 167 (463)
+.+.|+.|+++++ .+++ .|++|+|+++++.+++..+..++||+|+++ .|+++ +
T Consensus 80 ~e~aR~~ia~~lg------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~ 153 (805)
T PLN02724 80 IESARQQVLEYFN------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVD 153 (805)
T ss_pred HHHHHHHHHHHhC------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEecc
Confidence 4578888888886 5554 589999999999999998722789999986 35444 1
Q ss_pred CC---------Cccc--ChHHHHHHHHHH----HHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC-----CeE
Q 041151 168 RQ---------QIGV--LIINDLQQSVAQ----ARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE-----NLV 227 (463)
Q Consensus 168 ~~---------~~~~--d~~~~l~~~l~~----~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~-----~~~ 227 (463)
.+ ...+ +. +.|++.++. ....++++++|.+++.+|-||.+++.+.+..+.+.++.+ +++
T Consensus 154 ~~~~~~~~~~~~g~~~~~~-~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~ 232 (805)
T PLN02724 154 IEEAANQPTNSQGSVVVKS-RGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWM 232 (805)
T ss_pred chhccccccccccccccch-hhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceE
Confidence 11 1112 22 335544321 000112578999999999999999977655444433322 368
Q ss_pred EEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC-CCCceeEEEEecCCChhHHHHHHhhhh-h
Q 041151 228 LLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG-ECGQRGGYFEMTNIPPKTVDEIYKIAS-I 305 (463)
Q Consensus 228 vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 305 (463)
+++|.+++... .+..+..+ +..+++.|++|++ | +.| +|++++ .+++.+.+..... .
T Consensus 233 v~vDaaQ~~g~-----~piDv~~~-----------~~Dfl~~S~HK~~-GgP~G--~G~L~v---r~~~~~~l~p~~~GG 290 (805)
T PLN02724 233 VLLDAAKGCGT-----SPPDLSRY-----------PADFVVVSFYKIF-GYPTG--LGALLV---RRDAAKLLKKKYFGG 290 (805)
T ss_pred EEeehhhhcCC-----CCCChhhc-----------CCCEEEEecceec-cCCCC--ceEEEE---ehhhhhhhcCCccCC
Confidence 99999987532 23344432 1237889999988 6 667 788885 6666665543211 0
Q ss_pred ------------------------cccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhcC
Q 041151 306 ------------------------ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNSC 359 (463)
Q Consensus 306 ------------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 359 (463)
..+++.....++.++++ ++.. ++.+.++..+..+++.+.|.++
T Consensus 291 g~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~-----------~l~~ig~~~I~~~~~~L~~~l~~~L~~l 359 (805)
T PLN02724 291 GTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK-----------LLNRLTISAIAMHTWALTHYVANSLRNL 359 (805)
T ss_pred CceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH-----------HHHHhChHHHHHHHHHHHHHHHHHHHhc
Confidence 11233333344444432 2222 4667788888889999999887
Q ss_pred C------CcccccC---------CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----
Q 041151 360 R------NVVCNFT---------EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK----- 419 (463)
Q Consensus 360 p------g~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~----- 419 (463)
+ ++.++.+ .++.+.|.-....... -....+..++.++||.++.|..|...
T Consensus 360 ~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~----------v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~ 429 (805)
T PLN02724 360 KHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSW----------VGHREVEKLASLSGIQLRTGCFCNPGACAKY 429 (805)
T ss_pred cCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCE----------eCHHHHHHHHHhcCcEEeeccccCchHHHHH
Confidence 5 4666643 2344443211111110 02334567778899999999877531
Q ss_pred --------------------------C-CCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 420 --------------------------E-GIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 420 --------------------------~-~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
. ..+.+|+|++ ++.+|++++++.|++...
T Consensus 430 lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 430 LGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 0 1268999999 899999999999988553
No 271
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.66 E-value=5.2e-14 Score=141.63 Aligned_cols=292 Identities=11% Similarity=0.081 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcH-HHHHHHHHHHhc-C-CCCEEEEc-------------cCcee---c---
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGAS-KGVMQTLNCVIR-G-EGDGVVLL-------------FHTTW---K--- 167 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~-~-~gd~Vlvp-------------~g~~~---~--- 167 (463)
..+.+.+.+.+.+..|.+ +.+..++++|++ .++.+++.++-. . +|+.|++| .|+++ +
T Consensus 104 ~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeee
Confidence 455555555555555643 124577777777 577777777620 1 68999998 77766 2
Q ss_pred -CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCcc
Q 041151 168 -RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFV 246 (463)
Q Consensus 168 -~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~ 246 (463)
.+.+.+|+ +.|++++++. +++..++++++|+ |+...+.+++++|+++|++||+++|+|++|+....
T Consensus 183 d~~~~~iD~-e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~------- 249 (444)
T TIGR03531 183 DGDELTTDV-EDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN------- 249 (444)
T ss_pred cCcCCCcCH-HHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-------
Confidence 46789999 9999999862 1134666666776 56556678899999999999999999999985321
Q ss_pred chHHHH-HhcCCCCCCCce-EEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Q 041151 247 SSKKVL-MDMGLPFSKEVQ-LVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPL 324 (463)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~-~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~ 324 (463)
....+. +.+ . .++ .+++.|++|++ .+||+ .|.+++ .++++++.+.+... ....+.+.|.+...++..+
T Consensus 250 ~~~~~~~~g~----~-~Grad~vv~s~hK~l-~~pg~-Gg~I~~--~d~el~~~i~~~y~-g~~~~s~~~~~~~~ll~~G 319 (444)
T TIGR03531 250 KYMELINKAI----K-VGRVDAVVSSTDKNF-MVPVG-GAIIYS--FDENFIQEISKSYP-GRASASPSLDVLITLLSLG 319 (444)
T ss_pred hhhhhhhccc----c-ccCCCeEEEeCccCC-CCCCC-EEEEEE--CCHHHHHHHHHhcc-CCCCChHHHHHHHHHHHhC
Confidence 111111 111 1 111 46778999999 77776 444434 47888888877644 2334567777777766421
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccC-CceeEEeeeccCChhhHHHHhhcCCCChHHHHH
Q 041151 325 KPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---RNVVCNFT-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCL 400 (463)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---pg~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (463)
.+..+++.+++.++++++.+.|+++ -|.++... .....+-+.+.... ..+...+-
T Consensus 320 ----------~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----------~~~~~~~g 378 (444)
T TIGR03531 320 ----------SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----------GKDPTMLG 378 (444)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----------ccCHHHHH
Confidence 2334556777777888888877764 25666543 44444443333111 11233344
Q ss_pred HHHHhcCeE----eeCCC----------CCCCCC---CCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 401 RLLEATGIS----TVPGS----------GFGQKE---GIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 401 ~ll~~~gI~----v~pg~----------~f~~~~---~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
..|...+|. |.||. .|+... ...|+=++.+ .+.+|++.++.+|.++
T Consensus 379 ~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 379 SMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 556556662 44565 232210 1125555555 7889999999999865
No 272
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.65 E-value=1.6e-13 Score=136.45 Aligned_cols=307 Identities=17% Similarity=0.145 Sum_probs=201.2
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc------------cCcee--c
Q 041151 102 AYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL------------FHTTW--K 167 (463)
Q Consensus 102 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp------------~g~~~--~ 167 (463)
.|.....+.+|.++++++++ .+.++.+++++.|+..++...+ +|||.|..+ .|+.+ .
T Consensus 66 ~yag~~s~~~lE~~va~~~G--------~~~av~v~sGT~Al~ll~~l~l-~pGDeVpsn~~f~Tt~ahIe~~Gav~vDi 136 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG--------FKYVVPTHQGRGAENLLSQIAI-KPGDYVPGNMYFTTTRYHQEKNGATFVDI 136 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHhCC-CCcCEECCceeHHHHHHHHHhCCeEEEee
Confidence 58877778999999999985 4579999999999998877776 899977333 44433 1
Q ss_pred ------------CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC-ccCCCHHHHHHHHHHhhhCCeEEEecccc
Q 041151 168 ------------RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT-GQCLSEANLREILRFCYQENLVLLGDEVY 234 (463)
Q Consensus 168 ------------~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt-G~~~s~~~l~~l~~~a~~~~~~vi~Deay 234 (463)
...+.+|+ +.|++.+++... .++++|.+++++|-. |..+|.++++++.++|++||+.|++|.+.
T Consensus 137 ~~dea~~~~~~~p~~GniD~-~~Le~aI~~~~~--~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR 213 (450)
T TIGR02618 137 IIDEAHDAQLNIPFKGNVDL-KKLQKLIDEVGA--DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATR 213 (450)
T ss_pred ecccccccccCCCCCCCcCH-HHHHHHhccccC--cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 23577899 999999986211 145678888888855 89999999999999999999999999998
Q ss_pred cccc--c----CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h--
Q 041151 235 QQNI--Y----QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I-- 305 (463)
Q Consensus 235 ~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~-- 305 (463)
.... | ..+....++..+..++ .... ...+.|..|.+ +.+- .|++++ ++++++++++.... .
T Consensus 214 ~~gNA~~I~~re~g~~~~~i~ei~~e~----~~~a-D~~~~S~~Kd~-~~~~--GG~l~~--~d~~l~~k~r~~~~~~eG 283 (450)
T TIGR02618 214 CVENAYFIKEREQGYEDKSIAEILKEM----MSYA-DGCTMSGKKDC-LVNI--GGFLCM--NDDEMFQSAKELVVVFEG 283 (450)
T ss_pred hhhChhhhhcccccccCCCHHHHHHHH----hccC-cEEEEeeccCC-CCCC--ceEEEe--CCHHHHHHHHHHhhhcCC
Confidence 6521 1 0122234565544444 2222 24778999987 4442 577776 68999999887743 1
Q ss_pred --c-ccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeecc--CC
Q 041151 306 --A-LSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIR--LP 380 (463)
Q Consensus 306 --~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~--~~ 380 (463)
+ .+.+.-...+++..|.. ...+ ....+-..+.++|.+.|.+. |+.+..|.|+--++++.. +|
T Consensus 284 ~~tyGgla~r~~~ala~gL~e----------~~~~--~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lp 350 (450)
T TIGR02618 284 MPSYGGLAGRDMEAMAIGIRE----------AVDY--EYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLP 350 (450)
T ss_pred ccccCchhhhhHHHHHHHHHH----------hhhH--HHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCC
Confidence 1 12123333344434321 1111 11111223467899999998 999888888888887763 22
Q ss_pred hhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCC-CCCCC--------CCcEEEEEec---CCcCcHHHHHHHHHHHH
Q 041151 381 PKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSG-FGQKE--------GIFHLRTTIL---PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~-f~~~~--------~~~~lRis~~---~~~e~i~~~~~~l~~~l 447 (463)
.- ...+ -+...++..+..+.||--.- |+. ++..+ .-..+|+++. =+.+.++...++|..+.
T Consensus 351 h~--~~~~----~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~ 424 (450)
T TIGR02618 351 HI--PQDQ----FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLY 424 (450)
T ss_pred CC--Chhh----ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 20 0001 12456677888899987654 322 12211 1247999999 46678888888877665
Q ss_pred HH
Q 041151 448 DE 449 (463)
Q Consensus 448 ~~ 449 (463)
++
T Consensus 425 ~~ 426 (450)
T TIGR02618 425 KH 426 (450)
T ss_pred hh
Confidence 44
No 273
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.65 E-value=3.3e-14 Score=142.56 Aligned_cols=294 Identities=10% Similarity=-0.033 Sum_probs=184.5
Q ss_pred CcHH-HHHHHHHHhhhcCCCCCccCC--CCCCHHHHHHHHHHHHHhcCCCCC-CCcEEEcC-CcHHHHHHHHHHHhcCC-
Q 041151 81 FPAD-AIARAKHYLSLTSGGLGAYSD--SRGIPGVRKEVAEFIERRDGYPSD-PELIFLTD-GASKGVMQTLNCVIRGE- 154 (463)
Q Consensus 81 ~p~~-~~~a~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~-G~~~al~~~~~~l~~~~- 154 (463)
+++. +++++.+.... .. +.++ ..-+.+.|+.++++++ .+ +++|++++ |++.+++.++..++ ++
T Consensus 23 ~~~~~v~~a~~~~~~~---~~-hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~~~~gs~T~~~~~~~~~l~-~~~ 91 (378)
T PRK03080 23 KRPGWQLEALADALLG---RS-HRQKPVKALLKRVIEGTRELLS------LPEGYEVGIVPGSDTGAWEMALWSLL-GAR 91 (378)
T ss_pred CChHHHHHHHHhhhcc---cC-cCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchHHHHHHHHHhcC-CCC
Confidence 3666 88888754332 01 1111 2234567777777775 43 34788875 88999999999997 64
Q ss_pred CCEEEEc--------------cCc-ee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHH
Q 041151 155 GDGVVLL--------------FHT-TW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLR 215 (463)
Q Consensus 155 gd~Vlvp--------------~g~-~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~ 215 (463)
++.|++. +|+ ++ ...+..+|+ ++++ .++.|.+++.+|.||...+ ++
T Consensus 92 ~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~-~~i~-----------~~~~V~~~h~~t~tG~~~p---i~ 156 (378)
T PRK03080 92 RVDHLAWESFGSKWATDVVKQLKLEDPRVLEADYGSLPDL-SAVD-----------FDRDVVFTWNGTTTGVRVP---VA 156 (378)
T ss_pred cceEEEeCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCH-hhcC-----------CCCCEEEEecCCccceecc---ch
Confidence 5666664 354 44 223344555 5422 2466888999999999998 55
Q ss_pred HHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhH
Q 041151 216 EILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT 295 (463)
Q Consensus 216 ~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~ 295 (463)
+|++ +++|+++++|.+.+.... +..+.. -.+++.|..|++++++| +|++++ +++.
T Consensus 157 ~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~-------------iD~~~~s~~K~l~~P~G--~g~l~v---~~~~ 211 (378)
T PRK03080 157 RWIG--ADREGLTICDATSAAFAL-----PLDWSK-------------LDVYTFSWQKVLGGEGG--HGMAIL---SPRA 211 (378)
T ss_pred hhcc--ccCCCeEEEecccccccC-----CCCHHH-------------CcEEEEehhhhCCCCCc--eEEEEE---CHHH
Confidence 5555 678999999999886432 233332 13788999999855678 788885 7778
Q ss_pred HHHHHhhhh-----------------------hc-ccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHH
Q 041151 296 VDEIYKIAS-----------------------IA-LSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRA 349 (463)
Q Consensus 296 ~~~l~~~~~-----------------------~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 349 (463)
++++..... .+ .+++.....++.++|+ .+.++ .+.+.++.+++.
T Consensus 212 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~----------~l~~~gG~e~i~~r~~~l~ 281 (378)
T PRK03080 212 VERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLD----------WANSIGGLDALIARTAANA 281 (378)
T ss_pred HHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHH----------HHHHcCCHHHHHHHHHHHH
Confidence 777653210 00 1122222223233332 22222 456778888888
Q ss_pred HHHHHHhhcCCCcccccC----CceeEEeeeccCCh---hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 041151 350 RMMTDGFNSCRNVVCNFT----EGAMYSFPQIRLPP---KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGI 422 (463)
Q Consensus 350 ~~l~~~L~~~pg~~~~~~----~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 422 (463)
+++++.|++++++.+..+ .++..+. +.+|. .. +.++...++ ++||.+..|... . ..
T Consensus 282 ~~l~~~l~~~~~~~~~~~~~~~~s~~i~~--~~~~~~~~~~-----------~~~~~~~l~-~~~i~v~~g~~~-~--~~ 344 (378)
T PRK03080 282 SVLYDWAEKTPWATPLVADPATRSNTSVT--LDFVDAQAAV-----------DAAAVAKLL-RENGAVDIEPYR-D--AP 344 (378)
T ss_pred HHHHHHHHhCCCcccccCCccccCccEEE--EEcCCchHHH-----------HHHHHHHHH-HcCCeecccccc-C--CC
Confidence 999999998866665432 1222232 23333 11 234444544 558888876432 1 22
Q ss_pred cEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 423 FHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 423 ~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+.+|+|+. ++.+|++.+++.|++++++++.
T Consensus 345 ~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 345 NGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 47999999 8999999999999998877654
No 274
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=1.5e-13 Score=140.35 Aligned_cols=318 Identities=12% Similarity=0.092 Sum_probs=192.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---CCCC-E
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR---GEGD-G 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~~gd-~ 157 (463)
++.+.+++.+.+.... ....|- ..+.+..+|+.+.+... -..+.+++++++++|+..+++.... +.|. .
T Consensus 100 ~p~v~~Ai~~ql~~l~-~~~~~~----~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ 172 (459)
T PRK11522 100 NPVVVSAVQNQLAKQP-LHSQEL----LDPLRAMLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFT 172 (459)
T ss_pred CHHHHHHHHHHHhhCc-cccccc----CCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcE
Confidence 7889999998887631 111111 23455566666644311 1235899999999999999986531 1232 4
Q ss_pred EEEc----cCcee------c----CCCc-----------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC-CH
Q 041151 158 VVLL----FHTTW------K----RQQI-----------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL-SE 211 (463)
Q Consensus 158 Vlvp----~g~~~------~----~~~~-----------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~-s~ 211 (463)
|+.- +|... . ...+ -.|. +.+++.++.....+.++.+|++..-..-.|.+. +.
T Consensus 173 ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~ 251 (459)
T PRK11522 173 FIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNI-EAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPE 251 (459)
T ss_pred EEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCH-HHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCH
Confidence 4443 33221 0 0000 1166 888888865322223566776664444457654 56
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC-ceeEEEEecC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG-QRGGYFEMTN 290 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~ 290 (463)
+.++++.++|++||+++|.||++..+.- ....... ..+|+ .. .| .+++|.+ | .| +.+|.++.
T Consensus 252 ~yl~~lr~lc~~~g~llI~DEV~tG~GR-----tG~~~a~-e~~gv--~P---Di--vt~gK~l-g-gG~~Pigav~~-- 314 (459)
T PRK11522 252 GYLTAVRKLCDEFGALLILDEVQTGMGR-----TGKMFAC-EHENV--QP---DI--LCLAKAL-G-GGVMPIGATIA-- 314 (459)
T ss_pred HHHHHHHHHHHHcCCEEEeccceecCCc-----cchhhhh-hccCC--CC---CE--EEechhh-h-CCCccceeEEE--
Confidence 6799999999999999999999975421 1111111 12221 12 13 3889999 4 56 58899984
Q ss_pred CChhHHHHHHhh---hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CC-c
Q 041151 291 IPPKTVDEIYKI---ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC----RN-V 362 (463)
Q Consensus 291 ~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----pg-~ 362 (463)
.+++.+.+... ...+++.+++...++.+.|+ .+++ +.+.++.+++-++|.+.|+++ |. +
T Consensus 315 -~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~-----------~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i 381 (459)
T PRK11522 315 -TEEVFSVLFDNPFLHTTTFGGNPLACAAALATIN-----------VLLE-QNLPAQAEQKGDYLLDGFRQLAREYPDLV 381 (459)
T ss_pred -cHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHH-----------HHhc-chHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 77887766421 22456678888888877764 2222 245666777777777777654 21 1
Q ss_pred ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHH
Q 041151 363 VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIM 440 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~ 440 (463)
.-+...| .++-+.+.-+. ....+...|.++||.+.+.. .+...+|++.+ .+++++++++
T Consensus 382 ~~VrG~G-l~~giel~~~~-------------~~~~i~~~l~~~Gvl~~~~~-----~~~~~lr~~Ppl~~t~~~id~~l 442 (459)
T PRK11522 382 QEARGKG-MLMAIEFVDNE-------------IGYNFASEMFRQRVLVAGTL-----NNAKTIRIEPPLTLTIEQCEQVL 442 (459)
T ss_pred eeEEece-eEEEEEecCch-------------HHHHHHHHHHHCCeEEEecC-----CCCCEEEEECCccCCHHHHHHHH
Confidence 1122233 33333232111 12234455667899997632 12347999988 8999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 041151 441 ESFKKFNDEFMEQYED 456 (463)
Q Consensus 441 ~~l~~~l~~~~~~~~~ 456 (463)
++|.++++++.+..+|
T Consensus 443 ~~l~~~l~~~~~~~~~ 458 (459)
T PRK11522 443 KAARKALAAMRVSVEE 458 (459)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 9999999998877654
No 275
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=5.9e-13 Score=136.35 Aligned_cols=312 Identities=12% Similarity=0.030 Sum_probs=182.9
Q ss_pred cHHHHHHHHHHh-hhcCC---CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEE---cCCcHHHHHHHHHHHhcCC
Q 041151 82 PADAIARAKHYL-SLTSG---GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFL---TDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 82 p~~~~~a~~~~~-~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~ 154 (463)
++.+++++...+ ..+.. ....|+...-+.++.+...+...+.++ ...+.+++ .++++.|+..++.+|+ +|
T Consensus 47 s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~-~p 123 (475)
T PLN03226 47 SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALL-QP 123 (475)
T ss_pred CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhC-CC
Confidence 788899888887 33321 112233222223333311112222222 23334433 2566889999999998 99
Q ss_pred CCEEEEc---cCc-----------ee--------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc
Q 041151 155 GDGVVLL---FHT-----------TW--------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTG 206 (463)
Q Consensus 155 gd~Vlvp---~g~-----------~~--------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG 206 (463)
||+|+.. .|+ ++ ....+.+|+ ++|++.+... ++++|++. .++ +|
T Consensus 124 gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~-d~Le~~l~~~-----~pklIv~~-~S~-~s 195 (475)
T PLN03226 124 HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDY-DKLEKKAMLF-----RPKLIIAG-ASA-YP 195 (475)
T ss_pred CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCH-HHHHHHHhhc-----CCeEEEEe-cCc-CC
Confidence 9999982 111 11 123466799 9999998754 67876553 333 56
Q ss_pred cCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 207 QCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 207 ~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
...+ +++|.++|+++|+++++|++|.......+....++ +. -.++++|++|++. |-+.|++
T Consensus 196 ~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~-----------~~--~Div~~t~hK~L~---GP~Gg~I 256 (475)
T PLN03226 196 RDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF-----------EY--CDVVTTTTHKSLR---GPRGGMI 256 (475)
T ss_pred CccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC-----------CC--CeEEEecCccccc---CCCceEE
Confidence 6666 66777889999999999999987655222111111 11 2378999999984 5555888
Q ss_pred EecCCChhHH-----------H---HHHhhh-hhcccCChHHHHHH-HHhcCCCCCCCchHHHHHH-HHHHHHHHHHHHH
Q 041151 287 EMTNIPPKTV-----------D---EIYKIA-SIALSPNVPAQIFM-GLMVNPLKPGDISYEQFVR-ESKGILESLRRRA 349 (463)
Q Consensus 287 ~~~~~~~~~~-----------~---~l~~~~-~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 349 (463)
++ +++.+ + .+.... ....+.+.+.+.++ ..+++ .... ..+..+++..++.
T Consensus 257 ~~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~----------~i~~~~~~~~~~~~~~na 323 (475)
T PLN03226 257 FF---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALK----------QAMTPEFKAYQKQVKANA 323 (475)
T ss_pred EE---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHH----------HHhCcCHHHHHHHHHHHH
Confidence 85 55433 2 122111 11122233334333 33332 1111 1345678889999
Q ss_pred HHHHHHhhcCCCcccccCC-ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC--CCCcEEE
Q 041151 350 RMMTDGFNSCRNVVCNFTE-GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK--EGIFHLR 426 (463)
Q Consensus 350 ~~l~~~L~~~pg~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~--~~~~~lR 426 (463)
++|.+.|.+. |+.+..+. .+..+++++. +.++ +...+...|++.||.+..+..++.. -....+|
T Consensus 324 ~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~-~~gi-----------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giR 390 (475)
T PLN03226 324 AALANRLMSK-GYKLVTGGTDNHLVLWDLR-PLGL-----------TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVR 390 (475)
T ss_pred HHHHHHHHhC-CCEEEcCCCCCCEEEEEcc-CCCC-----------CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcc
Confidence 9999999886 98887532 2445555543 2111 2334567789999999865422210 0122488
Q ss_pred EEec------CCcCcHHHHHHHHHHHHHH
Q 041151 427 TTIL------PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 427 is~~------~~~e~i~~~~~~l~~~l~~ 449 (463)
++.. .+++|++++.+.|.++++.
T Consensus 391 iGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 391 IGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred cCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 8433 6778899999999888874
No 276
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.64 E-value=1.5e-13 Score=140.23 Aligned_cols=330 Identities=13% Similarity=0.042 Sum_probs=186.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCc-EEEcCCcHHHHHHHHHHHhcCCC-CEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPEL-IFLTDGASKGVMQTLNCVIRGEG-DGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~~g-d~Vl 159 (463)
++.+.+++.+++... .+.++. .-..+.+.++|+.+.+.......... +++++++++|+..+++....-.| .+|+
T Consensus 57 ~p~i~~ai~~q~~~~---~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii 132 (442)
T TIGR00709 57 HPNMKQKILDYLQSG---LPLHTL-DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVI 132 (442)
T ss_pred CHHHHHHHHHHHHhc---cCcccc-ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEE
Confidence 678999998887752 111111 01135666677776554221101124 45568999999999986531123 4455
Q ss_pred Ec----cCcee-------------------------c-CCCccc--------ChHHH----HHHHHHHHHhcCCceeEEE
Q 041151 160 LL----FHTTW-------------------------K-RQQIGV--------LIIND----LQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 160 vp----~g~~~-------------------------~-~~~~~~--------d~~~~----l~~~l~~~~~~~~~~~~i~ 197 (463)
.- +|... + .+.... +. +. +++.+........++.+|+
T Consensus 133 ~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~iaavi 211 (442)
T TIGR00709 133 SFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGS-NASIEYFENFIEDVESGVDKPAAVI 211 (442)
T ss_pred EEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHH-HHHHHHHHHHHHhhccCCCceEEEE
Confidence 43 22211 0 000000 11 22 2333321111112577777
Q ss_pred EE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC
Q 041151 198 II-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW 276 (463)
Q Consensus 198 l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 276 (463)
+. .++|+....++.+.+++|.++|++||+++|.||++..+... +. .... ..+++ .. .|++ +||.+
T Consensus 212 ~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt-G~-~~a~----~~~gv--~P---Div~--~gK~l- 277 (442)
T TIGR00709 212 LEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS-GT-MFAF----EHAGI--EP---DFVV--MSKAV- 277 (442)
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC-Cc-hhHH----HHcCC--CC---cEEE--Ecccc-
Confidence 77 55666555689999999999999999999999999986442 21 1111 12211 22 2333 89999
Q ss_pred CCCCceeEEEEecCCChhHHHHHHhh-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 277 GECGQRGGYFEMTNIPPKTVDEIYKI-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDG 355 (463)
Q Consensus 277 g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (463)
+. |+++|+++. +++ ++.+... ...+++.+++++.++.+.|+ .++ .+.+.++.+++.++|.+.
T Consensus 278 ~~-G~Pigav~~---~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~-----------~i~-~~~l~~~~~~~g~~l~~~ 340 (442)
T TIGR00709 278 GG-GLPLAVLLI---APE-FDAWQPAGHTGTFRGNQLAMVTGTEALN-----------YWK-DDNLAQNAQERGERITSF 340 (442)
T ss_pred cC-CcccEEEEE---chH-HhccCCCcCCCCCCcCHHHHHHHHHHHH-----------HHH-hcCHHHHHHHHHHHHHHH
Confidence 64 899999994 666 4544322 22577889999999988874 221 124566677777777777
Q ss_pred hhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec
Q 041151 356 FNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV-PDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL 430 (463)
Q Consensus 356 L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~ 430 (463)
|+++ |.+.-+...|-+ .-+.+.-+....+.......+ .-...+...+.++||.+.+....+ +.+|+..+
T Consensus 341 L~~l~~~~~~v~~vrG~Gl~-~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~-----~~l~~~Pp 414 (442)
T TIGR00709 341 LDDMIKEHPCIGNVRGRGLM-QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREG-----EVFRLLCP 414 (442)
T ss_pred HHHHHHhCCCeeeeeccceE-EEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCC-----CEEEEECC
Confidence 7653 222223334433 332232111000000000000 012334455678899997643222 36899888
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 431 --PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 431 --~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.++++++++++++.+++.++.++
T Consensus 415 l~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 415 ITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999887554
No 277
>PRK06541 hypothetical protein; Provisional
Probab=99.64 E-value=6.7e-14 Score=143.21 Aligned_cols=320 Identities=14% Similarity=0.126 Sum_probs=188.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-C-
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-E- 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~- 154 (463)
++.+.+++.+++.+.. ....+ ....+.+..+|+.+.+... -..+.+++++++++|+..+++.... . +
T Consensus 70 ~p~v~~Av~~q~~~~~-~~~~~---~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~ 143 (460)
T PRK06541 70 RAELAEAAAKQAGTLA-FFPLW---SYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPG 143 (460)
T ss_pred CHHHHHHHHHHHhhCc-Ccccc---ccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6889999998887631 11111 1122444556666644311 1236899999999999999886531 1 1
Q ss_pred CCEEEEc----cCcee-------------------------cCCC------cccC--------hHHHHHHHHHHHHhcCC
Q 041151 155 GDGVVLL----FHTTW-------------------------KRQQ------IGVL--------IINDLQQSVAQARSKGI 191 (463)
Q Consensus 155 gd~Vlvp----~g~~~-------------------------~~~~------~~~d--------~~~~l~~~l~~~~~~~~ 191 (463)
..+|+.- +|... +... ++-+ + +.+++.+... ++
T Consensus 144 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~---~~ 219 (460)
T PRK06541 144 KHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA-DRIEEAIEFE---GP 219 (460)
T ss_pred ccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH-HHHHHHHHhc---CC
Confidence 2445553 22211 0000 1111 2 4555555431 11
Q ss_pred ceeEEEEECC-CCCCccCCC-HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEe
Q 041151 192 TVRAMVIINP-GNPTGQCLS-EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFH 269 (463)
Q Consensus 192 ~~~~i~l~~p-~NPtG~~~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (463)
+..+.++..| .++.|.+.+ .+.+++|.++|++||+++|+||++..+.- ....... ..+++ .. .| .
T Consensus 220 ~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR-----~G~~~a~-~~~gv--~P---Di--v 286 (460)
T PRK06541 220 DTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR-----LGEMFGC-ERFGY--VP---DI--I 286 (460)
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cchhhhh-hhcCC--CC---CE--E
Confidence 3344455656 888898765 78899999999999999999999976411 1111111 12211 12 13 3
Q ss_pred cCCcccCCCCCc-eeEEEEecCCChhHHHHHHhhh-----hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHH
Q 041151 270 TVSKGYWGECGQ-RGGYFEMTNIPPKTVDEIYKIA-----SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILE 343 (463)
Q Consensus 270 S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (463)
++||.+ + .|+ ++|+++ +++++.+.+.... ..+++.+++...++.+.++ .++ .+.+.+
T Consensus 287 t~gK~l-~-~G~~pigav~---~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~-----------~l~-~~~~~~ 349 (460)
T PRK06541 287 TCAKGI-T-SGYSPLGAMI---ASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLD-----------IFE-REGLLD 349 (460)
T ss_pred Eecccc-c-CCccceeEEE---EcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHH-----------HHH-hccHHH
Confidence 599999 5 787 999999 4888888775321 1355667777767666653 222 224567
Q ss_pred HHHHHHHHHHHHhhcCCCc---ccccCCceeEEeeeccCChhhHHHHhhcCCCC------hHHHHHHHHHhcCeEeeCCC
Q 041151 344 SLRRRARMMTDGFNSCRNV---VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP------DVFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 344 ~~~~~~~~l~~~L~~~pg~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gI~v~pg~ 414 (463)
+++++.++|.+.|+++... ..+...|.++.+ .+.-+.. +.....+ ....+...+.++||++.+..
T Consensus 350 ~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~i-e~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~ 423 (460)
T PRK06541 350 HVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGI-ELVKDKA-----TKETFTDDESERLLRGFLSPALFEAGLYCRADD 423 (460)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEE-EEecCcc-----cccCCcchhhhhhHHHHHHHHHHhCCeEEEecC
Confidence 7888888888888775222 223445555443 2211100 0000000 01123455667899998721
Q ss_pred CCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 415 GFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 415 ~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.+...+||+.. .+++++++++++|.+++.+.+.
T Consensus 424 -----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 424 -----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 13347999999 8999999999999999987654
No 278
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=1.8e-13 Score=132.85 Aligned_cols=174 Identities=11% Similarity=0.156 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------c------CCCccc
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------K------RQQIGV 173 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------~------~~~~~~ 173 (463)
..|.+.+++.. .....+++++++.|+..++..|+ ++|+.|+.. ||+.. + ..-..-
T Consensus 80 ~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~ 150 (409)
T KOG0053|consen 80 DVLESGIAALE--------GAAHALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD 150 (409)
T ss_pred HHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence 45555555554 34568888888999999999998 899999886 66544 1 111112
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHH
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLM 253 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 253 (463)
|+ +.+++++++ ++++|++.+|.||+..+.+ +++|+++|+++|++|++|+.++...+- ....+
T Consensus 151 ~~-~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~------~pL~l-- 212 (409)
T KOG0053|consen 151 DL-KKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ------DPLPL-- 212 (409)
T ss_pred hH-HHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc------Chhhc--
Confidence 33 567777776 7999999999999999866 777788888999999999999875331 11111
Q ss_pred hcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhc
Q 041151 254 DMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMV 321 (463)
Q Consensus 254 ~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 321 (463)
+. .|+++|.+|.++|...+=.|.++. ..+++.++++..+. ..++.+++......+-+
T Consensus 213 ------GA---DIV~hSaTKyi~Ghsdvi~G~iv~--n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl 270 (409)
T KOG0053|consen 213 ------GA---DIVVHSATKYIGGHSDVIGGSVVL--NSEELASRLKFLQEDLGWCEDPFDLFLLSRGL 270 (409)
T ss_pred ------CC---CEEEEeeeeeecCCcceeeeEEec--CcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCc
Confidence 22 389999999998888888888884 34889999988876 56666666555554444
No 279
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.63 E-value=1.1e-13 Score=137.41 Aligned_cols=296 Identities=15% Similarity=0.171 Sum_probs=186.3
Q ss_pred CcHHHHHHHHHHhhhcC-CCCCccCCCCC-------CHHHHHHHHHHHHHhcCCCCCCCcEEEc-CCcHHHHHHHHHHHh
Q 041151 81 FPADAIARAKHYLSLTS-GGLGAYSDSRG-------IPGVRKEVAEFIERRDGYPSDPELIFLT-DGASKGVMQTLNCVI 151 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~-~~~~~Y~~~~g-------~~~lr~~ia~~~~~~~g~~~~~~~i~~t-~G~~~al~~~~~~l~ 151 (463)
.|+.+++++.+.+.++. .....+....- +.+.++.++++++ .+ +..+|+++ ++++.+++.++..++
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~----~~-~~~~v~~~~gsgt~~~Ea~~~nl~ 88 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLN----IP-DNYKVLFLQGGASLQFAMVPMNLL 88 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCcEEEEEcCCchHHHHHHHHhcC
Confidence 49999999988764321 11222222111 2345555555553 21 22356555 667889999999998
Q ss_pred cCCCCEEEEc---------------cCcee---cCC-CcccChHHHHHH-HHHHHHhcCCceeEEEEECCCCCCccCCCH
Q 041151 152 RGEGDGVVLL---------------FHTTW---KRQ-QIGVLIINDLQQ-SVAQARSKGITVRAMVIINPGNPTGQCLSE 211 (463)
Q Consensus 152 ~~~gd~Vlvp---------------~g~~~---~~~-~~~~d~~~~l~~-~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~ 211 (463)
.+|+++++. +|... ... ....+. .++++ .+++ ++++|.+++-.+.||...+
T Consensus 89 -~~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~-~~~~~~~l~~------~~~~V~~th~eTstGv~~~- 159 (360)
T PRK05355 89 -GGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYI-PPLDEWQLSD------DAAYVHYTSNETIDGTEFH- 159 (360)
T ss_pred -CCCCeEEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCC-CChhhccCCC------CCCEEEEccCCCcceEecC-
Confidence 899888876 34322 121 222333 34444 5554 7899999999999999984
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI 291 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~ 291 (463)
++.+| +++++++|.+.+.... +..+. +.+ +++.|..|++ |++| +|.+++
T Consensus 160 -~i~~i------~g~l~vVDavss~g~~-----~idv~-----------~~d--~~~~ssqK~l-gP~G--lg~l~~--- 208 (360)
T PRK05355 160 -ELPDT------GDVPLVADMSSDILSR-----PIDVS-----------KFG--LIYAGAQKNI-GPAG--LTIVIV--- 208 (360)
T ss_pred -ccccc------CCCcEEEEcCccccCc-----cCCHH-----------Hcc--EEEEeccccc-cCCc--eEEEEE---
Confidence 24444 7999999999886322 23332 222 7889999998 8888 788885
Q ss_pred ChhHHHHHHhh-----------hh--hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHh
Q 041151 292 PPKTVDEIYKI-----------AS--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGF 356 (463)
Q Consensus 292 ~~~~~~~l~~~-----------~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L 356 (463)
+++.++++... .. ...+++...-.++.++|+ ...++ ++.+.++.++..+++++.|
T Consensus 209 s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~----------~i~~~gG~e~i~~r~~~l~~~l~~~l 278 (360)
T PRK05355 209 REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFK----------WLKEQGGVAAMEKRNQEKAALLYDAI 278 (360)
T ss_pred CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 77777665441 11 234555666666666653 22232 5678888999999999999
Q ss_pred hcCCCcccccC---CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 357 NSCRNVVCNFT---EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 357 ~~~pg~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
++++.+....+ ..+..+. +..|... ++.+ ....+.++|+.+.+|.. . .+.+|+|+. +
T Consensus 279 ~~~~~~~~~~~~~~rs~~v~s--f~~~~~~----------~~~~-~~~~~~~~Gi~~~~~~~--~---~g~vRiS~~~~n 340 (360)
T PRK05355 279 DSSDFYRNPVAPEDRSRMNVP--FTLADEE----------LDKK-FLAEAKAAGLVGLKGHR--S---VGGMRASIYNAM 340 (360)
T ss_pred HhCCCcccCCChhhcCCcEEE--EEcCChH----------HHHH-HHHHHHHCCCcccCCCC--c---cCcEEEECCCCC
Confidence 99853222221 1222222 3444321 1223 33456678999866653 1 136999999 7
Q ss_pred CcCcHHHHHHHHHHHHHH
Q 041151 432 AEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~~ 449 (463)
+.+|++.+++.|++++++
T Consensus 341 t~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 341 PLEGVQALVDFMKEFERR 358 (360)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999997764
No 280
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.6e-13 Score=140.10 Aligned_cols=323 Identities=9% Similarity=0.034 Sum_probs=184.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++.+.. .+.......+...++++.+.+..... ..+.|++++++++|+..+++....-.| ..|+.
T Consensus 60 ~p~v~~Ai~~ql~~~~----~~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~ 134 (445)
T PRK08593 60 PPRVVEAIKAQADKFI----HYTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDANDGIIKFARAYTGRPYIIS 134 (445)
T ss_pred CHHHHHHHHHHHHhcc----CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHhhCCCeEEE
Confidence 7889999988887621 11111112344455666655432110 115899999999999999986421123 34444
Q ss_pred c----cCcee-----c--C----CCc--------------------c-cCh------HHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW-----K--R----QQI--------------------G-VLI------INDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~-----~--~----~~~--------------------~-~d~------~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
- +|... . . ..+ . .+. ++.+++.+.... ...++.+|++
T Consensus 135 ~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~ 213 (445)
T PRK08593 135 FTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVI 213 (445)
T ss_pred ECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEE
Confidence 3 22211 0 0 000 0 011 022333332210 0126777777
Q ss_pred ECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 199 INPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 199 ~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
....+..|.+ .+.+.+++|.++|++||+++|.||++..+... + ..... ..+++ ..+ +.++||.+ +
T Consensus 214 EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt-G----~~~a~-~~~gv--~pD-----i~t~gK~l-~ 279 (445)
T PRK08593 214 ETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT-G----KWSSI-SHFNI--TPD-----LMSFGKSL-A 279 (445)
T ss_pred ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC-c----hHHHH-HhcCC--CCC-----Eeeecccc-c
Confidence 7666667776 68888999999999999999999999865321 1 11111 12221 121 34799999 5
Q ss_pred CCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 278 ECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 278 ~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
.|+++|+++ +++++.+.+..... .+++.+++...++.+.|+ .+++ +++.++.+++-++|.+.|
T Consensus 280 -~G~p~gav~---~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~-----------~l~~-~~l~~~~~~~g~~l~~~L 343 (445)
T PRK08593 280 -GGMPMSAIV---GRKEIMESLEAPAHLFTTGANPVSCAAALATID-----------MIED-ESLLQRSAEKGEYARKRF 343 (445)
T ss_pred -CCcccEEEE---EcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHH
Confidence 689999999 58888888753322 466778888887777763 2221 235555666666666666
Q ss_pred hcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 357 NSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 357 ~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
+++ |-+.-+...|-+ +-+.+..+... ..........+...+.++||++.+.. ...+|++.+
T Consensus 344 ~~l~~~~~~v~~vrG~Gl~-~gi~l~~~~~~-----~~~~~~~~~~~~~~~~~~Gv~~~~~~-------~~~lr~~p~l~ 410 (445)
T PRK08593 344 DQWVSKYNFVGDVRGYGLS-IGIDIVSDKKL-----KTRDNEAALKICNYCFEHGVVIIAVA-------GNVLRFQPPLV 410 (445)
T ss_pred HHHHhcCCcEEEEeccceE-EEEEEecCCCc-----CCCcHHHHHHHHHHHHHCCeEEeccC-------CCEEEEECCCc
Confidence 543 222222333333 22222211000 00000012223455667899986631 136899888
Q ss_pred CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 431 PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 431 ~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.+++|++++++++.++++++.++
T Consensus 411 ~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 411 ITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999887654
No 281
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.62 E-value=3.2e-13 Score=131.92 Aligned_cols=335 Identities=16% Similarity=0.178 Sum_probs=211.6
Q ss_pred hcccceeccCCC-CcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHH
Q 041151 36 EGKKIIFTNVGN-PHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRK 114 (463)
Q Consensus 36 ~~~~~i~l~~G~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~ 114 (463)
+|+..||+..|+ |-.+|+. ++.+.+++.+++.+ -..|+.+. ++.-
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~---------------------------~p~V~~Av~~~l~~----G~~fg~Pt---e~Ei 96 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHA---------------------------HPAVVEAVQEQLER----GLSFGAPT---ELEV 96 (432)
T ss_pred CCCEeeehhccCcccccCCC---------------------------CHHHHHHHHHHHHh----cCCCCCCC---HHHH
Confidence 677788888886 6665542 56699999988886 24666543 5666
Q ss_pred HHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHh-cCCCCEEEEc---cCcee----------------------c
Q 041151 115 EVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVI-RGEGDGVVLL---FHTTW----------------------K 167 (463)
Q Consensus 115 ~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~-~~~gd~Vlvp---~g~~~----------------------~ 167 (463)
.+|+.+.++ ++. |.|-++|++|+|...+++.-- .-..|+|+.. |++.. +
T Consensus 97 ~~Aell~~~----~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp 172 (432)
T COG0001 97 ELAELLIER----VPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVP 172 (432)
T ss_pred HHHHHHHHh----cCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCC
Confidence 667776655 444 899999999999999888541 0234666664 11111 0
Q ss_pred C----C--Ccc-cChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCH-HHHHHHHHHhhhCCeEEEecccccccc
Q 041151 168 R----Q--QIG-VLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSE-ANLREILRFCYQENLVLLGDEVYQQNI 238 (463)
Q Consensus 168 ~----~--~~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~-~~l~~l~~~a~~~~~~vi~Deay~~~~ 238 (463)
. + ... =|+ +.++++++.. +.+.-+|++. -+.|- |.+.+. +-++.|-++|+++++++|.||+...|.
T Consensus 173 ~~~a~~ti~~~yND~-~al~~~~~~~---g~~IAaVIvEPv~gn~-g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR 247 (432)
T COG0001 173 ADVAKHTLVLPYNDL-EALEEAFEEY---GDDIAAVIVEPVAGNM-GVVPPEPGFLEGLRELTEEHGALLIFDEVITGFR 247 (432)
T ss_pred hhhhccEEEecCCCH-HHHHHHHHHc---CCcEEEEEeccccCCC-CCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcc
Confidence 0 0 001 166 9999998874 2357777776 66774 665554 459999999999999999999998876
Q ss_pred cCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhh----hhcccCChHHH
Q 041151 239 YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIA----SIALSPNVPAQ 314 (463)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~q 314 (463)
.. -........+.|+ +.+++|.+ | .|+.+|.+. +..++.+.+.... ..+++.++++.
T Consensus 248 ~~-~gGaq~~~gi~PD-------------lttlGKiI-G-GGlP~ga~g---Gr~eiM~~~~p~g~vyqaGT~sgnplam 308 (432)
T COG0001 248 VA-LGGAQGYYGVEPD-------------LTTLGKII-G-GGLPIGAFG---GRAEIMEQLAPLGPVYQAGTLSGNPLAM 308 (432)
T ss_pred cC-CcccccccCcCcc-------------hhhhhhhh-c-CCcceeeec---cHHHHHhhhCCCCCccccCCCCCcHHHH
Confidence 52 1111122233232 37899999 5 799999998 7888888775432 25678888888
Q ss_pred HHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCccccc-CCceeEEeeeccC-ChhhHHHHhh
Q 041151 315 IFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---RNVVCNF-TEGAMYSFPQIRL-PPKAIEAAKR 389 (463)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---pg~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~ 389 (463)
.|..+.|+. +...+...+++.+..+.|.+.|++. -|+.+.. ..|++|-+.=.+. +..+.++..
T Consensus 309 aAG~atl~~-----------l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~- 376 (432)
T COG0001 309 AAGLATLEE-----------LMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKR- 376 (432)
T ss_pred HHHHHHHHH-----------HHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHh-
Confidence 888887642 1111124555666666666666542 2555432 2344433211121 323222211
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 041151 390 AGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 390 ~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.....-..+.. .+.++||++.|.. |. ..=+|..+++++|++.++++.++++++.+
T Consensus 377 sd~~~~~~~~~-~~l~~GV~l~ps~-~e------a~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 377 SDVERFAKFFH-HLLNRGVYLAPSQ-FE------AGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred hchHHHHHHHH-HHHhCCcccCCcc-cc------ceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 11111223333 5667899998843 22 24678889999999999999988887653
No 282
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.62 E-value=3.9e-13 Score=133.70 Aligned_cols=323 Identities=12% Similarity=0.058 Sum_probs=195.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
+|.+++++.+.+.........|... +...++|+.+.+....+ ..+.+++++++++|++++++.--. .....|+.
T Consensus 74 hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~via 148 (447)
T COG0160 74 HPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIA 148 (447)
T ss_pred CHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEE
Confidence 8899999998887642222333322 34444455444321110 235799999999999999986521 12344444
Q ss_pred c----cCcee----------------------------c---CCCccc-------ChHHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW----------------------------K---RQQIGV-------LIINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~----------------------------~---~~~~~~-------d~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
. +|... + ...++. +..+.+++.+........++-+|++
T Consensus 149 f~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~ 228 (447)
T COG0160 149 FDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIII 228 (447)
T ss_pred ECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEE
Confidence 3 11110 1 111221 1214455655544333346788877
Q ss_pred ECCCCCCccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 199 INPGNPTGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 199 ~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
..-..-.|.+. |.+-++++.++|++||+++|.||+...+.-++ .+.++ ++.|+ .-=+-++||.+ |
T Consensus 229 EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-----~~fa~-E~~gv-------~PDivt~aK~i-g 294 (447)
T COG0160 229 EPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-----KMFAF-EHFGV-------EPDIVTLAKSL-G 294 (447)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-----cchhh-hhcCC-------CCCEEEecccc-c
Confidence 76676677554 55568999999999999999999999864321 33332 22211 12235799999 5
Q ss_pred CCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 278 ECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 278 ~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
.|+.+|.++ ..+++.+........+++.++++..++.+.|+ .+. .+++.++-.+.-+++.+.|.
T Consensus 295 -~G~Pl~avv---~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~----------vie--~e~L~~~a~~~G~~l~~~L~ 358 (447)
T COG0160 295 -GGLPLSAVV---GRAEIMDWPPGGHGGTFGGNPVACAAALAVLD----------VIE--EENLLERAAELGEYLRDRLE 358 (447)
T ss_pred -CCCceeEEe---ccHHhcccCCcccCCCCCcCHHHHHHHHHHHH----------HHH--HccHHHHHHHHHHHHHHHHH
Confidence 499999999 58877773333334578889999998888874 111 22456666666667777776
Q ss_pred cC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 358 SC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 358 ~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
++ |-+.-+... |+++-+.+..+... ........+.+...+.++|+.+..+..++. .+||... .
T Consensus 359 ~l~~~~~~IgdVRG~-Glm~giE~v~d~~t-----~~p~~~~~~~i~~~~~~~Glil~~~G~~~n-----viRi~PPL~i 427 (447)
T COG0160 359 ELQEKHPLIGDVRGL-GLMIGVELVKDRDT-----KEPDAELAAKIVARAFERGLLLLTCGPHGN-----VLRILPPLTI 427 (447)
T ss_pred HHHhhcCceeccccc-ceEEEEEEecCCCC-----CCCCHHHHHHHHHHHHHcCCEEeccCCCCc-----EEEEeCCccc
Confidence 53 322222222 45555444322110 000001233445567788998888665443 7999999 7
Q ss_pred CcCcHHHHHHHHHHHHHHH
Q 041151 432 AEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~~~ 450 (463)
++++++++++.|.+++++.
T Consensus 428 s~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 428 SDEELDEGLDILEEALKEA 446 (447)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 8999999999999998764
No 283
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.62 E-value=6.2e-13 Score=132.56 Aligned_cols=307 Identities=16% Similarity=0.124 Sum_probs=200.9
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee-
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW- 166 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~- 166 (463)
..|.....+.+|.++++++++ .+.++.+++++.|+.+++...+ +|||.| .+ .|+..
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG--------~e~aV~v~sGTaAl~ll~~l~v-~pGd~V-p~n~~f~Tt~ahI~~~Ga~fv 141 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYG--------FKHVVPTHQGRGAENLLSRIAI-KPGQYV-PGNMYFTTTRYHQELNGGIFV 141 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHHHHhCC-CCcCEE-CCccchHhhHHHHHhCCcEEE
Confidence 468877778999999999985 3568888888989998776666 899965 32 44433
Q ss_pred --c-----------CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC-ccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 167 --K-----------RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT-GQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 167 --~-----------~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt-G~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
. ...+.+|+ +.|++.+++.. .+++++|.+.+++|.. |..+|.+++++|.++|++||+.|++|.
T Consensus 142 Di~~d~a~~~~~~~p~tgnlD~-d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 142 DIIIDEAHDAQSDHPFKGNVDL-DKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred eeecccccccccCCCCCCCcCH-HHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 1 34678999 99999998531 1245677778888988 799999999999999999999999999
Q ss_pred ccccccc------CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-h
Q 041151 233 VYQQNIY------QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-I 305 (463)
Q Consensus 233 ay~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 305 (463)
+...... ..+....++.++..++ .... .+++.|++|.+ +.+- .|++++ .++++.++++...- .
T Consensus 219 Ara~gna~fI~~re~~y~~~~i~ei~~e~----~s~a-D~~t~S~~K~~-~~~~--GG~i~t--~D~eL~~~~r~~~~~~ 288 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQDKSIKEIVHEM----FSYA-DGCTMSGKKDC-LVNI--GGFLAM--NDEELFDEAKELVVVY 288 (460)
T ss_pred cchhcChhhhcccccccCCCcHhHHhhhc----cCcC-cEEEEeCCCCC-CCCC--ceEEEE--CCHHHHHHHHHhcccc
Confidence 9874310 0112223444444444 2222 36778899988 4332 588887 68999999987742 1
Q ss_pred -----cccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeecc--
Q 041151 306 -----ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIR-- 378 (463)
Q Consensus 306 -----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~-- 378 (463)
+.+.+.-...+++..|.... -..|+. .--++.++|.+.|.+. |+.+..|.||--++++..
T Consensus 289 eG~~tygg~~grd~~alAvgl~E~~-----~~~y~~-------~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~ 355 (460)
T PRK13237 289 EGMPSYGGMAGRDMEAMAIGIEESV-----QYEYIE-------HRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRF 355 (460)
T ss_pred CCCcCCCChhhhHHHHHHhHHHhhc-----hHHHHH-------HHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHh
Confidence 12222324444444443110 002222 2234567888999887 999999999988876653
Q ss_pred CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCC-CCCCC--------CCcEEEEEec---CCcCcHHHHHHHHHH
Q 041151 379 LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSG-FGQKE--------GIFHLRTTIL---PAEEDMPAIMESFKK 445 (463)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~-f~~~~--------~~~~lRis~~---~~~e~i~~~~~~l~~ 445 (463)
+|.- ...+ -+...++..+..+.||--.- |+. ++..+ .-..+|+++. =+.+.++...++|..
T Consensus 356 lph~--~~~~----~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~ 429 (460)
T PRK13237 356 LPHL--PQDQ----FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIK 429 (460)
T ss_pred CCCC--Cccc----ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHH
Confidence 1210 0000 12456677888899987653 221 22211 1247999999 466788888888776
Q ss_pred HHHH
Q 041151 446 FNDE 449 (463)
Q Consensus 446 ~l~~ 449 (463)
+.++
T Consensus 430 ~~~~ 433 (460)
T PRK13237 430 LYKH 433 (460)
T ss_pred HHHh
Confidence 6544
No 284
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=5.5e-13 Score=135.15 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=100.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~-~~~~ 170 (463)
...+++.++++.+ . .+.|++++| +.++..++.+++ ++||+|+++ .|+++ .-+
T Consensus 71 ~~~le~~la~l~g------~-~~~v~fsSG-~~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLEG------G-VHAVAFASG-QAAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 3567777777764 1 245555555 588888888887 899999987 23444 111
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
...|+ +.+++++++ ++++|++.++.||+|.+.+ +++|.++|+++|+++|+|.+++.... ..+. .
T Consensus 141 ~~~d~-e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~-----~~p~-~ 204 (437)
T PRK05613 141 NPDDP-ESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL-----VRPL-E 204 (437)
T ss_pred CCCCH-HHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc-----cChH-H
Confidence 12278 999999987 8999998899999998877 77788888899999999999865321 1111 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
+ . -.+++.|++|.+ +.+|--+|-+++
T Consensus 205 ~--------G---aDivv~S~~K~l-~G~gd~~gG~vv 230 (437)
T PRK05613 205 L--------G---ADVVVASLTKFY-TGNGSGLGGVLI 230 (437)
T ss_pred h--------C---CCEEEeecccee-cCCCcceeEEEE
Confidence 1 2 238899999988 656554455444
No 285
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.62 E-value=1.2e-13 Score=137.82 Aligned_cols=267 Identities=17% Similarity=0.214 Sum_probs=167.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
..+.++++.+.+.+ +....+++ -..++.+++++|++ .+.++.+++++.||.+++.++--++||+|++|
T Consensus 4 ~~e~~~~v~~~l~s--~~~~~~g~--~~~~fE~~~a~~~g--------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p 71 (363)
T PF01041_consen 4 TEEEIDAVLEVLRS--GWLSTYGP--YVEEFEKEFAEYFG--------VKYAVAVSSGTSALHLALRALGLGPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHH--TCCSSSSH--HHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEE
T ss_pred CHHHHHHHHHHHHh--CCccCCCH--HHHHHHHHHHHHhC--------CCeEEEeCChhHHHHHHHHhcCCCcCceEecC
Confidence 45666777777776 12222222 34788999999984 57888888889999999999843699999998
Q ss_pred -------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh
Q 041151 162 -------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 -------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|.++ ..+.+.+|+ +.+++.+++ ++|+|++++. -|... ++++|.++|++
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~-~~~~~~i~~------~t~ai~~~h~---~G~~~---d~~~i~~~~~~ 138 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFVDIDPETLNIDP-EALEKAITP------KTKAILVVHL---FGNPA---DMDAIRAIARK 138 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-BETTTSSB-H-HHHHHHHHT------TEEEEEEE-G---GGB------HHHHHHHHHH
T ss_pred CCcchHHHHHHHHhccEEEEEeccCCcCCcCH-HHHHHHhcc------CccEEEEecC---CCCcc---cHHHHHHHHHH
Confidence 77777 457899999 999999998 8999998754 23333 58889999999
Q ss_pred CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecC--CcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 224 ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTV--SKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
+|++||+|.+++......+....++ + .+.+.|| +|.+ +....|++++ .++++.++++.
T Consensus 139 ~~i~lIeD~a~a~g~~~~g~~~G~~-----------g----d~~~fSf~~~K~i---~~geGG~v~~--~~~~~~~~~~~ 198 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGARYKGRPVGSF-----------G----DIAIFSFHPTKII---TTGEGGAVVT--NDPELAERARA 198 (363)
T ss_dssp TT-EEEEE-TTTTT-EETTEETTSS-----------S----SEEEEESSTTSSS----SSS-EEEEE--STHHHHHHHHH
T ss_pred cCCcEEEccccccCceeCCEeccCC-----------C----CceEecCCCCCCC---cCCCCeeEEe--cHHHHHHHhhh
Confidence 9999999999997543222222221 2 2677787 5877 3344788887 67888899887
Q ss_pred hhhhccc--------------C-ChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 041151 302 IASIALS--------------P-NVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF 366 (463)
Q Consensus 302 ~~~~~~~--------------~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~ 366 (463)
+...+.. . ..+....++..+ ..++.++...+.-+++.+.+.+.|.+++++....
T Consensus 199 ~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl-----------~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~ 267 (363)
T PF01041_consen 199 LRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGL-----------AQLKRLDEIIARRRENAQRYREALAGIPGIKPPP 267 (363)
T ss_dssp HTBTTEETSECSTTEESSSS--B-B-BHHHHHHHH-----------HHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEG
T ss_pred hhccCcCccccccccccccCCcccccHHHHHHHHH-----------HHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccc
Confidence 6542211 0 111111121111 1344455566666777888899999988764432
Q ss_pred --CCc---eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCC
Q 041151 367 --TEG---AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 367 --~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~ 414 (463)
+.. .++.+ .+.++... . .+.+.+.+.|.+.||...+..
T Consensus 268 ~~~~~~~~~~~~f-~i~~~~~~--------~-~~rd~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 268 IPDGAERSSYYRF-PIRLPDEA--------L-ADRDELVEALRARGIETRPHY 310 (363)
T ss_dssp CGTTTEEBCESSE-EEEETCCG--------C-STHHHHHHHHHHTTBEEBCST
T ss_pred ccccccccccccc-cccccccc--------c-chHHHHHHHHHHCCCcccccc
Confidence 222 22221 12222110 0 023445667888899998755
No 286
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.61 E-value=6.6e-13 Score=134.22 Aligned_cols=323 Identities=11% Similarity=0.024 Sum_probs=191.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEE--EcCCcHHHHHHHHHHHhc-------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIF--LTDGASKGVMQTLNCVIR------- 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~~~~l~~------- 152 (463)
.+.+.+.+...+.....+.... ....++.+.+.+++.+..|.+-+.+++. +|+|+++++..++.+...
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~---~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEY---PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777776422222222 2234777777777777767531113454 489999999988865420
Q ss_pred CCC-----CEEEEc-------------cCcee---cCC--CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC
Q 041151 153 GEG-----DGVVLL-------------FHTTW---KRQ--QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL 209 (463)
Q Consensus 153 ~~g-----d~Vlvp-------------~g~~~---~~~--~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~ 209 (463)
..| ..|+++ .|.++ +.+ ++.+|+ +.|++++.+ ++.+|+++..||.||.+.
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~-~~L~~~i~~------~t~lV~~t~g~t~tG~id 203 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDP-EQVVEAVDE------NTIGVVCILGTTYTGEYE 203 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCH-HHHHHHHhh------CCeEEEEEeCCCCCcccC
Confidence 112 357776 45544 322 357899 999999987 789999999999999998
Q ss_pred CHHHHHHHHHHhhhC------CeEEEeccccccccc--CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCc
Q 041151 210 SEANLREILRFCYQE------NLVLLGDEVYQQNIY--QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQ 281 (463)
Q Consensus 210 s~~~l~~l~~~a~~~------~~~vi~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~ 281 (463)
+ +++|+++|+++ ++++.+|.+|+.+.. ..+.....+. ...-.-+..|.+|+++++.|
T Consensus 204 p---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-----------~~~~DSis~s~HK~~~~P~g- 268 (431)
T TIGR01788 204 D---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-----------LPRVKSINVSGHKYGLVYPG- 268 (431)
T ss_pred C---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-----------CCCceEEEECchhccCCCCC-
Confidence 8 67777788898 999999999995431 0011111111 01112467899997546666
Q ss_pred eeEEEEecCCChh-HHHHHHhh---hh-----hcccCChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHH
Q 041151 282 RGGYFEMTNIPPK-TVDEIYKI---AS-----IALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARM 351 (463)
Q Consensus 282 R~G~~~~~~~~~~-~~~~l~~~---~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 351 (463)
+|++++ .+++ +.+.+... .. .+...++..-.++..++. +..+ ..-.+++.++..++.++
T Consensus 269 -~G~l~~--r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~--------l~~lG~~G~~~i~~~~~~la~~ 337 (431)
T TIGR01788 269 -VGWVIW--RDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN--------FLRLGREGYRKIMQNSLDVARY 337 (431)
T ss_pred -cEEEEE--eChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH--------HHHhcHHHHHHHHHHHHHHHHH
Confidence 888887 3433 32333211 00 011222222112222211 0001 11244566777888889
Q ss_pred HHHHhhcCCCcccccC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 352 MTDGFNSCRNVVCNFT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 352 l~~~L~~~pg~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
+.+.|++.|++++..+ ..+...| ++...- ....+...+.+.|.++|+.+..-.....-.+...+|+++
T Consensus 338 l~~~L~~~~~~el~~~~~~~~iV~F---r~~~~~-------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~ 407 (431)
T TIGR01788 338 LAEEIAKLGPFEIISDGSGIPLVAF---KLKDDA-------DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVV 407 (431)
T ss_pred HHHHHHhCCCEEEeeCCCCceEEEE---EeCCCC-------CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEe
Confidence 9999999888988754 4444443 322100 000123334566788998754322211113445799999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
. .+.+.++++++.|++++.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 408 REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred cCCCCHHHHHHHHHHHHHHHHhh
Confidence 7 67788999999999888654
No 287
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=2.8e-13 Score=138.15 Aligned_cols=318 Identities=12% Similarity=0.039 Sum_probs=179.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC-CCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE-GDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-gd~Vlv 160 (463)
++.+.+++.+.+.+.. + +....-..+...++|+.+.+..... ..+.+++++++++|+..+++....-. ..+|+.
T Consensus 72 ~p~v~~Ai~~ql~~~~---~-~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~ 146 (441)
T PRK05769 72 HPKVVKAVKEQAEKFL---H-YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESNEAAIKIARYHTGRKYIIA 146 (441)
T ss_pred CHHHHHHHHHHHHhcc---C-ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHHhCCCeEEE
Confidence 6789999988887621 1 1111111345566777765432100 12689999999999999998653112 344555
Q ss_pred c----cCcee--------------------------cC-CC----cc-cCh-------HHHHHHHHHHHHhcCCceeEEE
Q 041151 161 L----FHTTW--------------------------KR-QQ----IG-VLI-------INDLQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 161 p----~g~~~--------------------------~~-~~----~~-~d~-------~~~l~~~l~~~~~~~~~~~~i~ 197 (463)
- +|... +. +. ++ -|. ++.+++.+-+......++.+|+
T Consensus 147 ~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi 226 (441)
T PRK05769 147 FLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAII 226 (441)
T ss_pred ECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEE
Confidence 3 22111 00 00 00 011 0234442211000112567766
Q ss_pred EECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC
Q 041151 198 IINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW 276 (463)
Q Consensus 198 l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 276 (463)
+.-...-.|.. .+.+.+++|.++|++||+++|+||++..+... +. ..... .+++ ..+ ++ ++||.+
T Consensus 227 ~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~-G~-~~a~~----~~gv--~pD---iv--t~~K~l- 292 (441)
T PRK05769 227 VEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT-GK-MFAIE----HFGV--EPD---II--TLAKAI- 292 (441)
T ss_pred ECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-cc-eehhh----ccCC--CCC---EE--EEcccc-
Confidence 65444445664 45778999999999999999999999865331 11 11111 1111 221 22 589999
Q ss_pred CCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 277 GECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 277 g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
+ .|+++|+++ +++++.+.+......+++.+++.+.++.+.|+ .+++ ++.++.+++-++|.+.|
T Consensus 293 ~-~G~p~gav~---~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~-----------~l~~--~~~~~~~~~g~~l~~~L 355 (441)
T PRK05769 293 A-GGLPLGAVI---GRAELMFLPPGSHANTFGGNPVAAAAALATLE-----------ELEE--GLLENAQKLGEYLRKEL 355 (441)
T ss_pred c-CCcccEEEE---EehhhhhcCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHH--HHHHHHHHHHHHHHHHH
Confidence 5 689999998 47777654332233456678888888887763 3333 56667777777777777
Q ss_pred hcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 357 NSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 357 ~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
+++ |-+.-+...| .++-+.+..+... ........+...+.++||++.+. +...+|++..
T Consensus 356 ~~l~~~~~~~~~vrg~G-~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~Gil~~~~-------~~~~lr~~p~l~ 420 (441)
T PRK05769 356 KELKEKYEFIGDVRGLG-LMIGVELVKDRKE-------PDPKLRDKVLYEAFKRGLLLLGA-------GKSAIRIIPPLI 420 (441)
T ss_pred HHHHHhCCCeeeeecce-EEEEEEeccCCcc-------ccHHHHHHHHHHHHhCCcEEecC-------CCCEEEEeCCCC
Confidence 653 2111122223 3333223211000 00001222344566789998762 2236999988
Q ss_pred CCcCcHHHHHHHHHHHHHHH
Q 041151 431 PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 431 ~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+++|+++++++|.+++.++
T Consensus 421 ~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 421 ITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 69999999999999998753
No 288
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.60 E-value=9.8e-13 Score=133.50 Aligned_cols=309 Identities=14% Similarity=0.094 Sum_probs=181.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---CCC-CE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR---GEG-DG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~~g-d~ 157 (463)
++.+.+++.+.+.... ....|- ..+.+..+|+.+.+... -.-+.+++++++++|+..+++.... ..| ..
T Consensus 93 hp~v~~Av~~ql~~l~-~~~~~~----~~~~~~~lAe~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ 165 (442)
T TIGR03372 93 NPNVIAAVENQLAKQP-LHSQEL----LDPLRALLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFT 165 (442)
T ss_pred CHHHHHHHHHHHHhCC-Cccccc----CCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcE
Confidence 7889999998887631 111121 13455556666654311 1125789999999999999986531 124 45
Q ss_pred EEEc----cCcee------c----CCCc-----------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC-CH
Q 041151 158 VVLL----FHTTW------K----RQQI-----------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL-SE 211 (463)
Q Consensus 158 Vlvp----~g~~~------~----~~~~-----------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~-s~ 211 (463)
|+.. +|... . ...+ -.|. +.+++.++.....+.++.+|++..-..--|... +.
T Consensus 166 ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~-~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~ 244 (442)
T TIGR03372 166 FIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDI-EAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPE 244 (442)
T ss_pred EEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCH-HHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCH
Confidence 5554 33221 0 0011 1256 788887764322223567777664444456655 57
Q ss_pred HHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC-ceeEEEEecC
Q 041151 212 ANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG-QRGGYFEMTN 290 (463)
Q Consensus 212 ~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~ 290 (463)
+-++++.++|++||+++|.||++..+.- . ...... ..+|+ .. .| .+++|.+ | .| +.+|.++
T Consensus 245 ~yl~~l~~lc~~~g~llI~DEV~tG~GR---t--G~~~a~-e~~gv--~P---Di--vt~gK~l-g-~G~~Pigavv--- 306 (442)
T TIGR03372 245 GYLPAVRALCDEFGALLILDEVQTGMGR---T--GKMFAC-EHEGV--QP---DI--LCLAKAL-G-GGVMPIGATI--- 306 (442)
T ss_pred HHHHHHHHHHHHcCCEEEEeecccCCCc---c--ccchhh-hhcCC--CC---Ce--eeehhhh-c-CCcccceEEE---
Confidence 7799999999999999999999976421 1 111111 12221 12 13 3589999 5 57 6899988
Q ss_pred CChhHHHHHHhh---hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----C-Cc
Q 041151 291 IPPKTVDEIYKI---ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC----R-NV 362 (463)
Q Consensus 291 ~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----p-g~ 362 (463)
+++++.+.+... ...+++.++++..++.+.|+ .+++ +++.++.+++-+++.+.|+++ | .+
T Consensus 307 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~-----------~i~~-~~l~~~~~~~G~~l~~~L~~l~~~~~~~i 374 (442)
T TIGR03372 307 ATEAVFSVLFDNPFLHTTTFGGNPLACAAALATIN-----------ELLE-KNLPAQAAIKGDFLLDGFQQLAAEYPDLI 374 (442)
T ss_pred ecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 478888877422 22466778888888877763 2221 124445555555666666543 3 22
Q ss_pred ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHH
Q 041151 363 VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIM 440 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~ 440 (463)
.-+...| .++-+.+.-+. ....+...+.++||++.+... +.+.+||+.+ .+++++++++
T Consensus 375 ~~vRG~G-l~~giel~~~~-------------~~~~i~~~l~~~Gvl~~~~~~-----~~~~lr~~Ppl~~t~~~id~~~ 435 (442)
T TIGR03372 375 IEARGKG-LLMAIEFRDNE-------------IGYAFAKELFQQNILVAGTLN-----NAKSIRIEPPLTITIEQCALVI 435 (442)
T ss_pred EEEecce-EEEEEEeCChH-------------HHHHHHHHHHHCCcEEeecCC-----CCCEEEEECCcccCHHHHHHHH
Confidence 2223333 44443332111 122344556678999975321 1237999988 8999999999
Q ss_pred HHHHHHH
Q 041151 441 ESFKKFN 447 (463)
Q Consensus 441 ~~l~~~l 447 (463)
++|.+++
T Consensus 436 ~~l~~~~ 442 (442)
T TIGR03372 436 KAAKDAL 442 (442)
T ss_pred HHHHHhC
Confidence 9998753
No 289
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.8e-12 Score=123.81 Aligned_cols=313 Identities=12% Similarity=0.071 Sum_probs=193.1
Q ss_pred cHHHHHHHHHHhhhc-C---CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLT-S---GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~-~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
++.+.++.-..+.+. . +.-..|+.-+-...+.+...+...+.+| .+-.+|...+| ++|...++.+|+ +|||+
T Consensus 39 S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhSG-s~AN~av~~All-~pGDt 114 (413)
T COG0112 39 SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHSG-SQANQAVYLALL-QPGDT 114 (413)
T ss_pred CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCCc-hHHHHHHHHHHc-CCCCe
Confidence 778888887776652 1 1122233322223444444455555545 33447777777 568999999998 99999
Q ss_pred EEEc---cCcee--------------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHH
Q 041151 158 VVLL---FHTTW--------------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANL 214 (463)
Q Consensus 158 Vlvp---~g~~~--------------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l 214 (463)
|+-. .|+.+ ..+...+|. |++++...+. +||+|+.-.-..| ..++ .
T Consensus 115 imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDy-D~~~k~a~e~-----kPK~ii~G~SaY~--r~id---~ 183 (413)
T COG0112 115 IMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDY-DEVEKLAKEV-----KPKLIIAGGSAYS--RPID---F 183 (413)
T ss_pred EecccCCCCCcccCCCCCCccceeEEeEecccccccCccCH-HHHHHHHHHh-----CCCEEEECccccc--cccC---H
Confidence 9885 33222 335688999 9999999987 9999876543333 2334 6
Q ss_pred HHHHHHhhhCCeEEEecccccc-cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh
Q 041151 215 REILRFCYQENLVLLGDEVYQQ-NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP 293 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~ 293 (463)
+++.++|.+.|.++++|-+|-. ++-+ +. +++... . -.|+.+|.+|+| .|=|.|.+.+ .+.
T Consensus 184 ~~~reIad~VGA~L~~DmAHiaGLVA~-G~-~p~P~~---------~---AdvVTtTTHKTl---rGPrGG~Il~--~~e 244 (413)
T COG0112 184 KRFREIADEVGAYLMVDMAHVAGLIAG-GV-HPNPLP---------H---ADVVTTTTHKTL---RGPRGGIILT--NDE 244 (413)
T ss_pred HHHHHHHHHhCceEEehHHHHHHHHhc-cc-CCCCCC---------c---cceEeCCcccCC---CCCCceEEEe--ccH
Confidence 6777777799999999999954 3332 22 222211 1 137889999998 5888999985 235
Q ss_pred hHHHHHHhh-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-Ccee
Q 041151 294 KTVDEIYKI-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT-EGAM 371 (463)
Q Consensus 294 ~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~-~g~~ 371 (463)
++..++.+. .. ....++....+++.++.-.+..+..|. .-.++..+|.+.|.+.|.+. |++++.. .-+-
T Consensus 245 el~kkin~aVFP-g~qggpl~HviAakaVa~~Eal~p~fk-------~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnH 315 (413)
T COG0112 245 ELAKKINSAVFP-GLQGGPLMHVIAAKAVAFKEALEPEFK-------EYAKQVVKNAKALAEALKER-GFKVVSGGTDNH 315 (413)
T ss_pred HHHHHhhhhcCC-ccCCChHHHHHHHHHHHHHHHcChhHH-------HHHHHHHHHHHHHHHHHHHc-CCeEecCCccce
Confidence 788888663 33 222233333333322211000112233 33445788899999999987 9988762 2234
Q ss_pred EEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCCCCC--CCCCcEEEEEec------CCcCcHHHHHHH
Q 041151 372 YSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSGFGQ--KEGIFHLRTTIL------PAEEDMPAIMES 442 (463)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~f~~--~~~~~~lRis~~------~~~e~i~~~~~~ 442 (463)
.+.+|++ +.+. +...+..+|.+.||.+.- +-.|.. +-....+||... -.++|+++..+-
T Consensus 316 l~lVDl~-~~~~-----------~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~ 383 (413)
T COG0112 316 LVLVDLR-SKGL-----------TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADL 383 (413)
T ss_pred EEEEEcc-cCCC-----------CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHH
Confidence 5666776 3221 455577889999999863 222221 111235999887 345677777777
Q ss_pred HHHHHHH
Q 041151 443 FKKFNDE 449 (463)
Q Consensus 443 l~~~l~~ 449 (463)
|.+++..
T Consensus 384 I~~vl~~ 390 (413)
T COG0112 384 IADVLDG 390 (413)
T ss_pred HHHHHhc
Confidence 7777664
No 290
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.60 E-value=2.3e-13 Score=135.62 Aligned_cols=197 Identities=10% Similarity=0.124 Sum_probs=124.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-----------------cCcee-cCCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-----------------FHTTW-KRQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-----------------~g~~~-~~~~ 170 (463)
..+|.+.++++.+ .+..+++++++.||..++.+++ ++||+|+++ .|+++ ..+.
T Consensus 66 ~~~lE~~la~leg--------~~~av~~sSG~aAi~~al~all-~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 66 VQAFEEKYAVLEN--------AEHALSFSSGMGAITSAILSLI-KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 3567777777753 4567788888899999999998 899999997 23333 0000
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHH
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKK 250 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~ 250 (463)
. +. +.++ ++. .++++|++.+|+|||+.+.+ +++|+++|++++ +++|.++..... .. ++ .
T Consensus 137 ~--~~-~~~~--l~~-----~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~--~~---pl-~ 195 (384)
T PRK06434 137 D--RL-NSLD--FDP-----SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYN--QN---PL-D 195 (384)
T ss_pred C--Ch-hhee--ecC-----CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCccc--CC---ch-h
Confidence 0 11 1121 121 16899999999999998855 888888888998 456999754321 11 11 1
Q ss_pred HHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCc
Q 041151 251 VLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDI 329 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~ 329 (463)
. . -.+++.|.+|.+.|..+.-.|.+++ .++++.++++.... .....+.+.-..+..-|
T Consensus 196 ~--------g---aDivv~S~tK~i~G~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-------- 254 (384)
T PRK06434 196 L--------G---ADVVIHSATKYISGHSDVVMGVAGT--NNKSIFNNLVERRKTLGSNPDPIQAYLALRGL-------- 254 (384)
T ss_pred c--------C---CCEEEeecccccCCCCCceEEEEec--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCC--------
Confidence 1 1 2388899999994333365787764 46677777765543 23333333222222332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 330 SYEQFVRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
+.+..+.++..++...+.+.|+++|.+
T Consensus 255 ------~tL~~R~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 255 ------KTLGLRMEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 223345556677888888889887765
No 291
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.59 E-value=9.6e-13 Score=143.20 Aligned_cols=302 Identities=10% Similarity=0.061 Sum_probs=188.3
Q ss_pred CCCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcH----HHHHHHHHHHhcCC-CC----EEEEc-----
Q 041151 99 GLGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGAS----KGVMQTLNCVIRGE-GD----GVVLL----- 161 (463)
Q Consensus 99 ~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~----~al~~~~~~l~~~~-gd----~Vlvp----- 161 (463)
..+.|.| .+|+.++-..+.+++.+..| .+.|.++++++ +++..+++++. ++ || +|++|
T Consensus 553 ~~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~-~~~Gd~~r~~vli~~~aH~ 627 (993)
T PLN02414 553 NIHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYH-LSRGDHHRNVCIIPVSAHG 627 (993)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHH-hccCCCCCCEEEeCCCcCc
Confidence 4566666 44655444444444444433 39999999988 89999999998 55 88 89998
Q ss_pred --------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 162 --------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 162 --------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
.|.++ .+.+..+|+ +.|++.+++. ..++++|++++|||-+|...+ +++|+++|+++|++++
T Consensus 628 sn~a~a~~~G~~vv~v~~d~~G~vDl-e~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~ 700 (993)
T PLN02414 628 TNPASAAMCGMKIVVVGTDAKGNINI-EELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVY 700 (993)
T ss_pred cCHHHHHHCCCEEEEeccCCCCCcCH-HHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEE
Confidence 46665 335678999 9999999841 016899999999999888755 8888889999999999
Q ss_pred ecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC---CceeEEEEecCCChhHHHHHHhh----
Q 041151 230 GDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC---GQRGGYFEMTNIPPKTVDEIYKI---- 302 (463)
Q Consensus 230 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~---G~R~G~~~~~~~~~~~~~~l~~~---- 302 (463)
+|-++...... ..... +.+-.|+++|.+|+|++.. |-.+|++.+ .+++...+-..
T Consensus 701 vDgAq~~a~~~----l~~p~-----------~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~ 762 (993)
T PLN02414 701 MDGANMNAQVG----LTSPG-----------FIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVP 762 (993)
T ss_pred EEecCHHhccC----cCCcc-----------ccCCCEEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCcccc
Confidence 99998653221 11111 1123488899999884222 233888885 55544433110
Q ss_pred --------hhhcccC---ChHHHH----HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 041151 303 --------ASIALSP---NVPAQI----FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT 367 (463)
Q Consensus 303 --------~~~~~~~---~~~~q~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~ 367 (463)
.....++ +...|. ++..++... -.+-+++..+.-..+.+++.+.|.+..++.+..|
T Consensus 763 ~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l---------G~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~ 833 (993)
T PLN02414 763 TGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM---------GSEGLTDASKIAILNANYMAKRLEGHYPVLFRGK 833 (993)
T ss_pred CCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH---------CHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCC
Confidence 1001111 122222 112221100 0111344566777788899999977445555555
Q ss_pred CceeEE--eeecc-CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHH
Q 041151 368 EGAMYS--FPQIR-LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMES 442 (463)
Q Consensus 368 ~g~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~ 442 (463)
.+.++- .+++. ++.. .+ .+..++..+|+ ++||..-. ..|. ..+++||+.. .+.+||++++++
T Consensus 834 ~~~~~hEfv~~~~~l~~~-------~g-~~~~di~krL~-d~Gihapt-~~~p---v~~~lmiepTE~~skeelDrf~~a 900 (993)
T PLN02414 834 NGTCAHEFIIDLRPFKNT-------AG-IEPEDVAKRLM-DYGFHAPT-MSWP---VPGTLMIEPTESESKAELDRFCDA 900 (993)
T ss_pred CCCeeeeEEEeccccccc-------cC-CCHHHHHHHHH-HcCcEEee-eccc---cCCEEEEEeeeeCCHHHHHHHHHH
Confidence 554221 11222 2210 01 12355555544 89997644 3342 3458999999 889999999999
Q ss_pred HHHHHHHHHH
Q 041151 443 FKKFNDEFME 452 (463)
Q Consensus 443 l~~~l~~~~~ 452 (463)
|+++..+..+
T Consensus 901 l~~i~~e~~~ 910 (993)
T PLN02414 901 LISIREEIAD 910 (993)
T ss_pred HHHHHHHHHH
Confidence 9999888765
No 292
>PRK04311 selenocysteine synthase; Provisional
Probab=99.58 E-value=2.4e-12 Score=130.91 Aligned_cols=315 Identities=13% Similarity=0.061 Sum_probs=181.5
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCC---CC--CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDS---RG--IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 155 (463)
+|+.+++++.+.+..+. ...|... .| +..+++.++++++ .+..+++++++.++..++.++ .+|
T Consensus 98 l~~~v~eav~~~~~~~~--~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae~a~vv~sgtaAl~l~l~~l--~~G 165 (464)
T PRK04311 98 LSEAAIEAVTEAARGYS--NLEYDLATGKRGSRDRALAALLCALTG--------AEDALVVNNNAAAVLLALNAL--AAG 165 (464)
T ss_pred CCHHHHHHHHHHHhccc--ccccchhhcccchHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHh--CCC
Confidence 48999999988877631 1122211 12 2577788887764 456777888889999988775 699
Q ss_pred CEEEEc----c--C-------------cee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC--ccCCCHH
Q 041151 156 DGVVLL----F--H-------------TTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT--GQCLSEA 212 (463)
Q Consensus 156 d~Vlvp----~--g-------------~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt--G~~~s~~ 212 (463)
|+|+++ + | +++ .......++ +.+++++++ ++++|++++++||+ |.. ...
T Consensus 166 deVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~-~dle~aI~~------~TklV~~vh~sN~~i~G~~-~~~ 237 (464)
T PRK04311 166 KEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHL-RDYEQAINE------NTALLLKVHTSNYRIEGFT-KEV 237 (464)
T ss_pred CEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCH-HHHHHhcCc------cCeEEEEEcCCCccccccC-CcC
Confidence 999997 1 2 222 111223567 899999987 89999999999984 432 113
Q ss_pred HHHHHHHHhhhCCeEEEecccccccc----cCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNI----YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
++++|+++|++||+++|+|.+...+. |+-.. .+.+... -+.+-.++++|.+|++ |.| ..|+++
T Consensus 238 dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~-~p~~~~~--------l~~GaDiv~fSg~K~L-gGp--~~G~i~- 304 (464)
T PRK04311 238 SLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD-EPTVQEL--------LAAGVDLVTFSGDKLL-GGP--QAGIIV- 304 (464)
T ss_pred CHHHHHHHHHHcCCeEEEECCCcccccchhccCCC-CCchhhH--------HhcCCcEEEecCcccc-cCC--ceEEEE-
Confidence 48889999999999999999654321 10001 1122221 1112348999999998 434 489988
Q ss_pred cCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCC--Cc-
Q 041151 289 TNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYE--QFVRESKGILESLRRRARMMTDGFNSCR--NV- 362 (463)
Q Consensus 289 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~p--g~- 362 (463)
+++++++++++..- ....+......++.+.|..-...+..+. ..++-+....++..++.+.+.+.|+..+ ++
T Consensus 305 --g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~ 382 (464)
T PRK04311 305 --GKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFA 382 (464)
T ss_pred --EcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCee
Confidence 58889888764321 2233333333333333310000000000 0111122233566677888888887753 32
Q ss_pred -ccccC----Cce-e-----E-EeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec
Q 041151 363 -VCNFT----EGA-M-----Y-SFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL 430 (463)
Q Consensus 363 -~~~~~----~g~-~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~ 430 (463)
.+.+. .|| + . .-+.++.. + -+...+...|++....|..- . .+..+.+.+.
T Consensus 383 ~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-~-----------~~~~~l~~~lr~~~~~i~~r----~--~~~~~~ld~r 444 (464)
T PRK04311 383 VEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-D-----------RSLEALAARLRLLPPPVIGR----I--EDGRLLLDLR 444 (464)
T ss_pred EEEEEccCccCCCCCcCCCCCeEEEEEeCC-C-----------CCHHHHHHHHhcCCCCEEEE----E--ECCEEEEEeC
Confidence 33321 111 1 1 11112211 1 13344556677644333221 1 2336888888
Q ss_pred -CCcCcHHHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~l~ 448 (463)
..++|++.++++|++++.
T Consensus 445 ~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 445 TLEEEDEERLAAALLEALN 463 (464)
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 788999999999988753
No 293
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.58 E-value=1e-12 Score=135.53 Aligned_cols=324 Identities=12% Similarity=0.048 Sum_probs=187.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.... ...+...+..+....+++.+.+... +...+.+++++++++|+..+++.... .++
T Consensus 107 hp~v~~Av~~ql~~~~---~~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~ 182 (504)
T PLN02760 107 EPRLVAAATEQLNKLP---FYHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPN 182 (504)
T ss_pred CHHHHHHHHHHHhhcc---ceecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCC
Confidence 7889999998887631 1111111234555666666543311 11224789999999999999997620 133
Q ss_pred -CEEEEc----cCcee--------c--CCCcc-----------------------------cChHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW--------K--RQQIG-----------------------------VLIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~--------~--~~~~~-----------------------------~d~~~~l~~~l~~~~~~~~ 191 (463)
..|+.- +|... + ...++ ... +.|++.+.... ..
T Consensus 183 r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~le~~l~~~~--~~ 259 (504)
T PLN02760 183 KKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLA-DNLENLILKEG--PE 259 (504)
T ss_pred CcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHH-HHHHHHHHhcC--CC
Confidence 345543 22221 0 00000 001 33555554210 12
Q ss_pred ceeEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEeccccccc-ccCCCCCccchHHHHHhcCCCCCCCceEEEEe
Q 041151 192 TVRAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQN-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFH 269 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (463)
++.+|++.--..-.|.+ .+.+-+++|.++|++||+++|.||++..+ .. + . ... ...+|+ .. -+.
T Consensus 260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRt-G-~----~~a-~e~~gv--~P-----Div 325 (504)
T PLN02760 260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRL-G-T----MFG-CDKYNI--KP-----DLV 325 (504)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCccc-c-h----hhH-HHhcCC--CC-----cEE
Confidence 46666655334444654 46777999999999999999999999765 22 1 1 111 122222 11 247
Q ss_pred cCCcccCCCCC-ceeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Q 041151 270 TVSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKG 340 (463)
Q Consensus 270 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (463)
+|+|.+ | .| +.+|.++ +++++.+.+... ...+++.++++..++.+.|+ .+++ ++
T Consensus 326 tlgK~l-g-gG~~PigAv~---~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le-----------~i~~-~~ 388 (504)
T PLN02760 326 SLAKAL-S-SAYMPIGAVL---VSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK-----------IYKE-RN 388 (504)
T ss_pred Eecccc-c-CCccccceEe---ecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH-----------HHHh-CC
Confidence 789999 4 45 4788888 588888887531 23467778888888887764 2221 24
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCC
Q 041151 341 ILESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 341 ~~~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~ 414 (463)
+.++.+++-++|.+.|+++ |-+.-+...| .++-+.+.-+... ......+ ...+...+.++||.+.+..
T Consensus 389 l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g 462 (504)
T PLN02760 389 IPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG-LILGTEFVDNKSP-----NDPFPAEWGVGAYFGAECKKRGMLVRVAG 462 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc-eEEEEEEecCCcc-----cccccchhHHHHHHHHHHHhCCcEEEecC
Confidence 5666677777777766654 2122223334 3333223211100 0000001 2223455678899997621
Q ss_pred CCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhccc
Q 041151 415 GFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQYEDY 457 (463)
Q Consensus 415 ~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~~~ 457 (463)
..+|++.. .+++||++++++|.++++++.++.++-
T Consensus 463 --------~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~~~~~ 499 (504)
T PLN02760 463 --------DNIMMSPPLIITPEEVDELISIYGKALKATEERVAEL 499 (504)
T ss_pred --------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 25899977 899999999999999999887666553
No 294
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.55 E-value=2.6e-12 Score=127.32 Aligned_cols=291 Identities=12% Similarity=0.115 Sum_probs=173.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+++++.+++.+.......|. .+.+.++++.+.+.. ..+.+++++++++|+..+++....-+| ++|+.
T Consensus 42 ~p~v~~ai~~ql~~~~~~~~~~~-----~~~~~~la~~l~~~~----~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~ 112 (364)
T PRK04013 42 HPEWVEEMSEQLEKLVVAGPMFE-----HEEKEEMLEELSKWV----NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIA 112 (364)
T ss_pred CHHHHHHHHHHHHhcCCccCCcC-----CHHHHHHHHHHHhhc----CCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEE
Confidence 67888999888876311111222 234444555554331 236899999999999999997642345 77777
Q ss_pred c----cCcee---c-------CCCc-----------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc-CCCHHHH
Q 041151 161 L----FHTTW---K-------RQQI-----------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ-CLSEANL 214 (463)
Q Consensus 161 p----~g~~~---~-------~~~~-----------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~-~~s~~~l 214 (463)
. +|... . ...+ -.|. +.+++.+.+ ++.+|++.......|. ..+.+.+
T Consensus 113 ~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~-~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl 185 (364)
T PRK04013 113 MTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDV-EAAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFV 185 (364)
T ss_pred ECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCH-HHHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHH
Confidence 5 22211 0 0001 1256 888888765 7899887755544454 4466779
Q ss_pred HHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 215 REILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 215 ~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
++|.++|++||+++|+||++..+.. + . +... ..++. ..+ +-+++|.+ | .|+.+|.++. +.+
T Consensus 186 ~~lr~lc~~~gillI~DEv~tG~Rt-G-~----~~a~-~~~gv--~PD-----iv~~gK~l-g-gG~P~~a~~~---~~~ 246 (364)
T PRK04013 186 KTLRDLTEDVGALLIADEVQSGLRT-G-K----FLAI-EHYKV--EPD-----IVTMGKGI-G-NGVPVSLTLT---NFD 246 (364)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCC-C-c----hhHH-HhcCC--CCC-----EEEecccc-c-CCceeEEEEe---ccc
Confidence 9999999999999999999987522 1 1 1111 11211 221 24569999 5 5899999984 554
Q ss_pred HHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEe
Q 041151 295 TVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSF 374 (463)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~ 374 (463)
+. . .....+++.++++..++.+.|+ .+++ +++.++.++. + ..+.. |-+.-+...| ++.-
T Consensus 247 ~~-~--~~~~~T~~gnp~~~aaa~a~l~-----------~i~~-~~l~~~~~~~---l-~~l~~-~~v~~vRG~G-l~~g 305 (364)
T PRK04013 247 VE-R--GKHGSTFGGNPLACKAVAVTLR-----------ILRR-ERLVEKAGEK---F-IEIKG-ERVVTTRGRG-LMIG 305 (364)
T ss_pred cc-C--CCcCCCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHH---H-HHhcc-CcceeeeeCc-EEEE
Confidence 41 1 1223477788888888888764 2221 1122222221 2 22222 2222233333 3433
Q ss_pred eeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 375 PQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+++.. +... +...+.++|+.+.+. +.+.+|+... .+++++++++++|.+++.+.
T Consensus 306 --ve~~~------------~~~~-i~~~~~~~Gll~~~~-------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 306 --IVLKK------------PVGK-YVEELQNRGYLVHTA-------GQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred --EEeCC------------cHHH-HHHHHHhCCcEEeeC-------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 33321 1223 345567789999762 2247999999 79999999999999999764
No 295
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.54 E-value=1.3e-12 Score=132.43 Aligned_cols=306 Identities=13% Similarity=0.104 Sum_probs=180.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----CCC-
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----GEG- 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~g- 155 (463)
++.+.+++.+++.+....... .. ..+.+..+++.+.+... ...+.+++++++++|++.+++.... ..|
T Consensus 61 ~p~i~~Ai~~q~~~~~~~~~~---~~-~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r 134 (428)
T PRK07986 61 HPQLNAAMKSQIDAMSHVMFG---GI-THPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPR 134 (428)
T ss_pred CHHHHHHHHHHHhhcCCcccc---cc-CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 678999998888763111110 11 23455666666654321 1236899999999999999986531 122
Q ss_pred CEEEEc----cCcee-----cC-----------------------CCc-----ccChHHHHHHHHHHHHhcCCceeEEEE
Q 041151 156 DGVVLL----FHTTW-----KR-----------------------QQI-----GVLIINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 156 d~Vlvp----~g~~~-----~~-----------------------~~~-----~~d~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
.+|+.- +|... .. ..+ .-|. +.+++.++.. +.++.+|++
T Consensus 135 ~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~-~~l~~~l~~~---~~~iaavi~ 210 (428)
T PRK07986 135 QRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI-APFARLMAAH---RHEIAAVIL 210 (428)
T ss_pred cEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH-HHHHHHHHhC---CCcEEEEEE
Confidence 455554 22211 00 000 0144 6677777532 124566666
Q ss_pred ECC-CCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC
Q 041151 199 INP-GNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW 276 (463)
Q Consensus 199 ~~p-~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 276 (463)
... +.-.|. ..+++.+++|.++|++||+++|+||++..+.- .+... .. . .+|+ .. .|+ +++|.+
T Consensus 211 Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~Gr-tG~~f-a~-~---~~gv--~P---Di~--t~gK~l- 276 (428)
T PRK07986 211 EPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGR-TGKLF-AC-E---HAGI--AP---DIL--CLGKAL- 276 (428)
T ss_pred echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCcc-CCCee-ee-c---ccCC--CC---CEE--Eechhh-
Confidence 542 443454 44668899999999999999999999965422 11110 11 1 1111 12 133 589999
Q ss_pred CCCC-ceeEEEEecCCChhHHHHHHhh------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 041151 277 GECG-QRGGYFEMTNIPPKTVDEIYKI------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRA 349 (463)
Q Consensus 277 g~~G-~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (463)
+ .| +.+|.++ +++++.+.+... ...+++.+++...++.+.|+ .+++ ..+.++.+++-
T Consensus 277 ~-gG~~p~~av~---~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~-----------~i~~-~~~~~~~~~~g 340 (428)
T PRK07986 277 T-GGTMTLSATL---TTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLS-----------LLES-GDWQQQVAAIE 340 (428)
T ss_pred h-CCcccCcchh---chHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHH
Confidence 4 57 5788887 588888888642 22456677777777777763 2221 23456666666
Q ss_pred HHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEE
Q 041151 350 RMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLR 426 (463)
Q Consensus 350 ~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lR 426 (463)
+++.+.|+++ |.+.-+...| ++.-+.+..+. ....+...+.++||++.+. + +.+|
T Consensus 341 ~~l~~~l~~l~~~~~i~~vRg~G-l~~~ve~~~~~-------------~~~~~~~~l~~~Gl~~~~~---g-----~~i~ 398 (428)
T PRK07986 341 AQLREELAPLRDAPMVADVRVLG-AIGVVETTRPV-------------NMAALQRFFVEQGVWIRPF---G-----KLIY 398 (428)
T ss_pred HHHHHHHHHHhcCCCEEeEeccc-eEEEEEeCCcc-------------cHHHHHHHHHHCCcEEEec---C-----CEEE
Confidence 7777777654 2222222223 33333232121 1223445577889999773 1 2699
Q ss_pred EEec--CCcCcHHHHHHHHHHHHHH
Q 041151 427 TTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 427 is~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
++.. .+++++++++++|.+++++
T Consensus 399 ~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 399 LMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9877 8999999999999998854
No 296
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=1.7e-12 Score=131.79 Aligned_cols=308 Identities=13% Similarity=0.068 Sum_probs=182.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+.+.+.......+. ..+.+..+|+.+.+... ...+.+++++++++|+..+++.... .+|
T Consensus 62 ~p~v~~ai~~q~~~~~~~~~~~~----~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~ 135 (429)
T PRK06173 62 HPRLNAAATNQLAKMSHIMFGGF----THEPAVELAQKLLEILP--PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQ 135 (429)
T ss_pred CHHHHHHHHHHHHhcCCcccccc----CCHHHHHHHHHHHhhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCC
Confidence 67889999888876311111011 12344455555543311 1236899999999999999886531 133
Q ss_pred -CEEEEc----cCcee-----cC--C----Ccc----------------------cChHHHHHHHHHHHHhcCCceeEEE
Q 041151 156 -DGVVLL----FHTTW-----KR--Q----QIG----------------------VLIINDLQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 156 -d~Vlvp----~g~~~-----~~--~----~~~----------------------~d~~~~l~~~l~~~~~~~~~~~~i~ 197 (463)
.+|+.- +|... .. . .+. -++ +.|++.+... +.++.+|+
T Consensus 136 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l-~~l~~~i~~~---~~~iAAvi 211 (429)
T PRK06173 136 RTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI-EPLQDLLEQK---GDEIAALI 211 (429)
T ss_pred CcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHH-HHHHHHHHhC---CCcEEEEE
Confidence 345443 33221 00 0 000 024 5666776531 22677877
Q ss_pred EECC-CCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCccc
Q 041151 198 IINP-GNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGY 275 (463)
Q Consensus 198 l~~p-~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 275 (463)
+.-- ..-.|.. .+.+-+++|.++|++||+++|+||++..+.- .. ..+.. ..+++ .. .|+ +|+|.+
T Consensus 212 ~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr---tG-~~~a~--~~~gv--~P---Div--~~gK~l 278 (429)
T PRK06173 212 LEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGR---TG-KLFAL--EHAGV--VP---DIM--CIGKAL 278 (429)
T ss_pred EcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCc---CC-cchHH--HhcCC--CC---CEE--Eeehhh
Confidence 7642 4545655 6788899999999999999999999965311 11 11111 12211 11 233 499999
Q ss_pred CCCCC-ceeEEEEecCCChhHHHHHHhh------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 041151 276 WGECG-QRGGYFEMTNIPPKTVDEIYKI------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRR 348 (463)
Q Consensus 276 ~g~~G-~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (463)
+ .| +.++.++ .++++.+.+... ...++..+++...++.+.|+ .+++ +..+++.+++
T Consensus 279 -~-gG~~p~~a~~---~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~i~~-~~~~~~~~~~ 341 (429)
T PRK06173 279 -T-GGYLTLSATI---TTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR-----------LLLE-SPWQQNIQRI 341 (429)
T ss_pred -h-CCccccceEE---ecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHH
Confidence 4 57 4678777 488888877531 12345567777777777653 2222 1356677777
Q ss_pred HHHHHHHhhcCCCcccc---cCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEE
Q 041151 349 ARMMTDGFNSCRNVVCN---FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHL 425 (463)
Q Consensus 349 ~~~l~~~L~~~pg~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~l 425 (463)
-++|.+.|+++.++..+ ...| ++.-+.+..+. ....+...|.++||++.+. + +.+
T Consensus 342 g~~l~~~L~~~~~~~~v~~vRg~G-l~~~iel~~~~-------------~~~~i~~~l~e~Gi~v~~~---g-----~~l 399 (429)
T PRK06173 342 EAQLKQELAPAAEFDSVAEVRVLG-AIGVVEMKEPV-------------NMATLQPRFVEHGIWVRPF---G-----KLV 399 (429)
T ss_pred HHHHHHHHHHhhcCCCeeeeeccc-eEEEEEeCCcc-------------cHHHHHHHHHHCCeEEEec---C-----CEE
Confidence 77888877754222222 2233 33333232111 1223455677889999773 1 269
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 426 RTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 426 Ris~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
|+... .+++|+++++++|.+++.+.+
T Consensus 400 ~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 400 YIMPPFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999 799999999999999997654
No 297
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.54 E-value=8.5e-12 Score=123.19 Aligned_cols=291 Identities=12% Similarity=0.053 Sum_probs=161.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCC------CCCCHHHHHHHHHHHHHhcCCCCCCC----cEEEcCCcHHHHHHHHHHHh
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSD------SRGIPGVRKEVAEFIERRDGYPSDPE----LIFLTDGASKGVMQTLNCVI 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~~~al~~~~~~l~ 151 (463)
++.+.+++...+.+. ...+|+. .+-..++.+...+...+.++. .++ +|-.- +++.|...++.+|+
T Consensus 33 Sp~v~~al~S~l~nk--yaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvqp~-SGs~An~av~~aLl 107 (399)
T PF00464_consen 33 SPAVREALGSDLTNK--YAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQPH-SGSQANLAVYMALL 107 (399)
T ss_dssp -HHHHHHHTSGGGGS---TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE---S-SHHHHHHHHHHHHT
T ss_pred CHHHHHHhCCcceee--ccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEeecC-CchHHHHHHHHHHH
Confidence 667777776655542 2223332 222234444444445555553 333 33333 55779999999998
Q ss_pred cCCCCEEEEc---cCcee-------------------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCC
Q 041151 152 RGEGDGVVLL---FHTTW-------------------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGN 203 (463)
Q Consensus 152 ~~~gd~Vlvp---~g~~~-------------------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~N 203 (463)
+|||+|+.. .|+.+ ..+...+|. +++++.+... +||+|++..-++
T Consensus 108 -~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~-d~l~~~a~~~-----kPklIi~G~S~y 180 (399)
T PF00464_consen 108 -KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDY-DELEKLAKEH-----KPKLIICGASSY 180 (399)
T ss_dssp --TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-H-HHHHHHHHHH-------SEEEEE-SST
T ss_pred -hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECH-HHHHHHHhhc-----CCCEEEECchhc
Confidence 999999985 33221 245788999 9999999987 899998775555
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG 283 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 283 (463)
| .. -+.+++.++|.+.|.+|++|-+|-......+ ..++.... . .|+.+|.+|+| +|=|.
T Consensus 181 ~--~~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g-~~~~P~~~--------A----Dvvt~sThKtl---~GPrg 239 (399)
T PF00464_consen 181 P--RP---IDFKRFREIADEVGAYLMADISHIAGLIAGG-LFPNPFPY--------A----DVVTGSTHKTL---RGPRG 239 (399)
T ss_dssp S--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS--GCCT--------S----SEEEEESSGGG----SSS-
T ss_pred c--Cc---cCHHHHHHHHHhcCcEEEecccccccceehh-eecCcccc--------c----eEEEeeccccc---cccCc
Confidence 4 22 3477777788899999999999964332122 22222111 1 27889999998 68888
Q ss_pred EEEEecCCC--------------hhHHHHHHhhhh-hcccCChHHHHHHH-HhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 041151 284 GYFEMTNIP--------------PKTVDEIYKIAS-IALSPNVPAQIFMG-LMVNPLKPGDISYEQFVRESKGILESLRR 347 (463)
Q Consensus 284 G~~~~~~~~--------------~~~~~~l~~~~~-~~~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (463)
|.+.+ + +++.+++.+.-. ...+.+.....++. .++.. . ...+.++-.++..+
T Consensus 240 giI~~---~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~e------a---~~~~fk~Ya~qVv~ 307 (399)
T PF00464_consen 240 GIILT---NKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKE------A---LSPEFKEYAKQVVK 307 (399)
T ss_dssp EEEEE---S-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHH------H---TSHHHHHHHHHHHH
T ss_pred eEEEE---cCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhc------c---cCHHHHHHHHHHHH
Confidence 99996 4 778888876543 22232333333332 22210 0 00112334556788
Q ss_pred HHHHHHHHhhcCCCccccc-CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC--CCCCcE
Q 041151 348 RARMMTDGFNSCRNVVCNF-TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ--KEGIFH 424 (463)
Q Consensus 348 ~~~~l~~~L~~~pg~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~--~~~~~~ 424 (463)
|.+.|.+.|.+. |+++.. ...+..+|++++-. + -+...+...|++.||.+..-...+. +-....
T Consensus 308 NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~-~-----------~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sG 374 (399)
T PF00464_consen 308 NAKALAEALQER-GFKVVTGGTDNHQVLVDLRSF-G-----------IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSG 374 (399)
T ss_dssp HHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGG-T-----------S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SE
T ss_pred HHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccc-c-----------cchHHHHHHHHhcCeeecccccCCCCCCCCCCE
Confidence 899999999998 888874 23345677776511 1 1345567889999999863211111 111246
Q ss_pred EEEEec
Q 041151 425 LRTTIL 430 (463)
Q Consensus 425 lRis~~ 430 (463)
+||+..
T Consensus 375 lRlGT~ 380 (399)
T PF00464_consen 375 LRLGTP 380 (399)
T ss_dssp EEEESH
T ss_pred EEECCH
Confidence 999988
No 298
>PRK06105 aminotransferase; Provisional
Probab=99.54 E-value=3e-12 Score=131.20 Aligned_cols=325 Identities=13% Similarity=0.066 Sum_probs=187.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+.. ....+ .....+.+.++++.+.+... -.-+.|++++++++|+..+++.... .+|
T Consensus 66 ~p~i~~Ai~~q~~~~~-~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~ 140 (460)
T PRK06105 66 EQRLVEAAARQMKKLP-FYHTF--SHKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPE 140 (460)
T ss_pred CHHHHHHHHHHHHhCC-Ceecc--cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 7889999998887631 01111 11123444556666654321 1235899999999999999997420 123
Q ss_pred -CEEEEc----cCcee--------c--CCCccc-----------------------------ChHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW--------K--RQQIGV-----------------------------LIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~--------~--~~~~~~-----------------------------d~~~~l~~~l~~~~~~~~ 191 (463)
.+|+.- +|... + ...+++ .. +.+++.+... ...
T Consensus 141 r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~le~~~~~~--~~~ 217 (460)
T PRK06105 141 KKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLA-NELEALILAE--GPD 217 (460)
T ss_pred CcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHH-HHHHHHHHHc--CCC
Confidence 345553 22221 0 000100 12 4566665421 012
Q ss_pred ceeEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.--..--|.. .+.+-+++|.++|++||+++|.||++..+.-.+ . +... ..+++ ..+ +.+
T Consensus 218 ~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG-~----~f~~-~~~~v--~PD-----i~~ 284 (460)
T PRK06105 218 TIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG-N----MFGC-ETFGI--KPD-----ILV 284 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc-h----hhhH-HhcCC--CCC-----eee
Confidence 56777666444444654 578889999999999999999999997652211 1 1111 12211 111 347
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
+||.+ + .| +.+|.++ +++++.+.+... ...+++.+++...++.+.|+ ++++ +++
T Consensus 285 ~gK~l-g-gG~~P~~av~---~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~-----------~i~~-~~l 347 (460)
T PRK06105 285 MSKQL-S-SSYQPLSAVL---MNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA-----------IIEE-RDL 347 (460)
T ss_pred eeccc-c-cCcccceEEE---EcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH-----------HHHh-ccH
Confidence 89999 4 45 5899998 588888877532 12366778888888777763 2222 245
Q ss_pred HHHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCC
Q 041151 342 LESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSG 415 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~ 415 (463)
.++.+++-++|.+.|+++ |.+.-+...| ++.-+.+..+.. +.....+ ....+...+.++||.+.+.
T Consensus 348 ~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~-----~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~-- 419 (460)
T PRK06105 348 VGNAAERGARLQARLRALADHPLVGEVRGVG-LIAAVELVADKA-----TKTPFEPPGKVGARANAAAHEHGVISRAM-- 419 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCcc-----cCCCCCchhHHHHHHHHHHHHCCeEEEec--
Confidence 566666777777777654 2222223333 333333321100 0000000 1123445567899999872
Q ss_pred CCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhccccC
Q 041151 416 FGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQYEDYRG 459 (463)
Q Consensus 416 f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~~~~~ 459 (463)
+ +.+|++.. .+++|+++++++|.++++++.+ +.-.++
T Consensus 420 -g-----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~-~~~~~~ 458 (460)
T PRK06105 420 -G-----DTLAFCPPLIITAAQVDEMVDRFGRALDDVAA-WVAAGG 458 (460)
T ss_pred -C-----CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH-HHhhcC
Confidence 1 26999988 5999999999999999998765 443333
No 299
>PLN02271 serine hydroxymethyltransferase
Probab=99.53 E-value=3e-11 Score=122.53 Aligned_cols=314 Identities=11% Similarity=0.039 Sum_probs=186.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCcc------CCCCCCHHHHHHHHHHHHHhcCCCCC-C-CcEEEcCCcHHHHHHHHHHHhcC
Q 041151 82 PADAIARAKHYLSLTSGGLGAY------SDSRGIPGVRKEVAEFIERRDGYPSD-P-ELIFLTDGASKGVMQTLNCVIRG 153 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~-~-~~i~~t~G~~~al~~~~~~l~~~ 153 (463)
++.+++++-..+.+. ...+| +..+.+.++.....+...+.+|.+.. . .+|..-+| +.|...++.+|+ +
T Consensus 161 S~av~~algS~ltnk--YaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SG-s~AN~aV~~ALl-~ 236 (586)
T PLN02271 161 CRAVMEALGSHLTNK--YSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSC-TSANFAVYTGLL-L 236 (586)
T ss_pred CHHHHHHhcCccccc--CCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccH-HHHHHHHHHHhc-C
Confidence 677777776655542 22233 33333334544444455455554321 1 46776655 678999999998 9
Q ss_pred CCCEEEEc---cCce-------------------e-------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCC
Q 041151 154 EGDGVVLL---FHTT-------------------W-------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNP 204 (463)
Q Consensus 154 ~gd~Vlvp---~g~~-------------------~-------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NP 204 (463)
|||+|+.. +|+. + ......+|. +++++..... ++|+|++..-.||
T Consensus 237 PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDy-d~lek~a~~~-----rPKLII~g~Sayp 310 (586)
T PLN02271 237 PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDY-DKLEEKALDF-----RPKILICGGSSYP 310 (586)
T ss_pred CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCH-HHHHHHhhhc-----CCeEEEECchhcc
Confidence 99999994 2211 1 134467899 9999955443 8999988777777
Q ss_pred CccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeE
Q 041151 205 TGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGG 284 (463)
Q Consensus 205 tG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G 284 (463)
..++ ++++.++|+++|+++++|.+|.......+ ...+.. .. -.|+.+|.+|++. |=|.|
T Consensus 311 --r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g-~~~sP~----------~~--aDvvt~TTHKtLr---GPrGG 369 (586)
T PLN02271 311 --REWD---YARFRQIADKCGAVLMCDMAHISGLVAAK-ECVNPF----------DY--CDIVTSTTHKSLR---GPRGG 369 (586)
T ss_pred --CcCC---HHHHHHHHHHcCCEEEEECcccccccccC-cCCCCC----------cC--CcEEEeCCcccCC---CCCce
Confidence 5555 66677788899999999999986655222 111111 11 2389999999984 55668
Q ss_pred EEEecCC-----------------ChhHHHHHHhhh-h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHH
Q 041151 285 YFEMTNI-----------------PPKTVDEIYKIA-S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESL 345 (463)
Q Consensus 285 ~~~~~~~-----------------~~~~~~~l~~~~-~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (463)
.+++.++ .+++.+++.+.- . ...++.....++.+.+++... ...| +.-.++.
T Consensus 370 ~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~--~~ef-------k~Ya~QV 440 (586)
T PLN02271 370 IIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA--TPEY-------KAYMQQV 440 (586)
T ss_pred EEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh--ChHH-------HHHHHHH
Confidence 8886211 012444443322 2 112222222222233332100 0112 3345567
Q ss_pred HHHHHHHHHHhhcCCCcccccC-CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC--CCC
Q 041151 346 RRRARMMTDGFNSCRNVVCNFT-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK--EGI 422 (463)
Q Consensus 346 ~~~~~~l~~~L~~~pg~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~--~~~ 422 (463)
.+|.+.|.+.|.+. |++++.. ..+..++++++-- + -+...+.+.|++.||.+.--..++.. -..
T Consensus 441 v~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~-g-----------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 441 KKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTL-G-----------LTGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCccc-C-----------CCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 88899999999887 8887752 2345667666411 1 13456788899999998642222221 112
Q ss_pred cEEEEEec------CCcCcHHHHHHHHHHHHH
Q 041151 423 FHLRTTIL------PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 423 ~~lRis~~------~~~e~i~~~~~~l~~~l~ 448 (463)
+.+||... ..++|+++..+-|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 35999877 456788887777777765
No 300
>PRK02769 histidine decarboxylase; Provisional
Probab=99.53 E-value=4.1e-11 Score=119.52 Aligned_cols=275 Identities=9% Similarity=-0.019 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcE--EEcCCcHHHHHHHHHHHh-cCCCCEEEEc-------------cCcee----cC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELI--FLTDGASKGVMQTLNCVI-RGEGDGVVLL-------------FHTTW----KR 168 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~-~~~gd~Vlvp-------------~g~~~----~~ 168 (463)
..++.+++.+++.+..|. +++++ ++|+|+++++..++.+.. ..++++|+++ .|... ..
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 355666666666666564 34444 889999999876655431 1477888886 33222 33
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC---eEEEecccccccccCCCCCc
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN---LVLLGDEVYQQNIYQDERPF 245 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~---~~vi~Deay~~~~~~~~~~~ 245 (463)
..+.+|+ +.|++.+++. +.++.+|+++.++|+||.+-+ +++|.++|++++ +++.+|.+|+.+...-....
T Consensus 141 ~~g~id~-~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 141 PNGEIDY-DDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred CCCcCcH-HHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 4567999 9999999872 224899999999999999977 677777888997 79999999987543100000
Q ss_pred cchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhh------hh--cccCChHHHHHH
Q 041151 246 VSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIA------SI--ALSPNVPAQIFM 317 (463)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~------~~--~~~~~~~~q~~~ 317 (463)
..+ .. .. +-..+..|.+|.++++.| +|.+++ .++..+.+.... .. ..+.+.....++
T Consensus 214 ~~~-d~--------~~-~vDsis~s~HK~~~~P~g--~G~l~~---r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~l 278 (380)
T PRK02769 214 PPF-SF--------AD-GIDSIAISGHKFIGSPMP--CGIVLA---KKKYVERISVDVDYIGSRDQTISGSRNGHTALLL 278 (380)
T ss_pred ccC-Cc--------cC-CCCEEEECCcccCCCCCC--cEEEEE---ehhhhhhcccCccccCCCCCCccCCCCcHHHHHH
Confidence 011 00 11 123567899998732445 888886 444555442110 01 122233334444
Q ss_pred HHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cCCceeEEeeeccCChhhHHHHhhcCCCChH
Q 041151 318 GLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCN-FTEGAMYSFPQIRLPPKAIEAAKRAGKVPDV 396 (463)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (463)
...|+... ..-.+++.++..+..+++.+.|++. |+.+. .|......| +.| +.
T Consensus 279 w~aL~~lg---------~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f---~~~--------------~~ 331 (380)
T PRK02769 279 WAAIRSLG---------SKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVF---PCP--------------SE 331 (380)
T ss_pred HHHHHHHC---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEE---cCC--------------CH
Confidence 44442110 1124556777788888999999886 77654 454444433 432 11
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 397 FYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 397 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
.. . .|..+.+-. .++||++. .+.+.++.+++.|...+.
T Consensus 332 ~~----~--~~w~l~~~~--------~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 332 RI----W--KKWHLATSG--------NQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred HH----H--hCeeEcccC--------CEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 21 1 455555421 26899999 566677777777766554
No 301
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.53 E-value=6.3e-12 Score=118.87 Aligned_cols=145 Identities=14% Similarity=0.200 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee-------------cCCCcc
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW-------------KRQQIG 172 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~-------------~~~~~~ 172 (463)
...|.+.||..-+ |. .-+-+++++.|+..++..++ .+||.|+.. +|+.. ......
T Consensus 64 ~~vlE~RiAaLEG---G~-----aa~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 64 TDVLEERIAALEG---GV-----AALAVASGQAAITYAILNLA-GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred HHHHHHHHHHhhc---ch-----hhhhhccchHHHHHHHHHhc-cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC
Confidence 4678888888764 21 23445667999999999998 999999886 66654 111233
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
.|+ +.+++++++ ++|+|++..-.||.+.+.+ +++|+++|+++++.+|+|..+....+ ..++..
T Consensus 135 ~d~-~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl-----~rP~~h-- 197 (426)
T COG2873 135 DDP-ENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYL-----CRPIEH-- 197 (426)
T ss_pred CCH-HHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCccee-----cchhhc--
Confidence 467 999999999 8999999999999999977 88899999999999999999875322 112211
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecC
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTN 290 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~ 290 (463)
.. .|+++|.||++ |-.|--+|=+++..
T Consensus 198 -------GA---DIVvHS~TK~i-gGhGt~iGG~iVD~ 224 (426)
T COG2873 198 -------GA---DIVVHSATKYI-GGHGTAIGGVIVDG 224 (426)
T ss_pred -------CC---CEEEEeecccc-cCCccccceEEEeC
Confidence 22 38899999999 77898888888743
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.52 E-value=3.6e-12 Score=129.90 Aligned_cols=313 Identities=14% Similarity=0.114 Sum_probs=179.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+.+.+.. ....+ .-..+.+..+|+.+.+... -..+.|++++++++++..+++.... . +|
T Consensus 64 ~p~v~~ai~~ql~~l~-~~~~~---~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~ 137 (442)
T PRK13360 64 RPEIVEAVRAQAGELD-YAPAF---QMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSESVDTALKIALAYHRARGEGS 137 (442)
T ss_pred CHHHHHHHHHHHHhCC-CcccC---CcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6789999988887621 01111 1113445566666654311 1235899999999999999886431 0 22
Q ss_pred -CEEEEc----cCcee-------------------------cCC-C-----ccc--------ChHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW-------------------------KRQ-Q-----IGV--------LIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~~~-~-----~~~--------d~~~~l~~~l~~~~~~~~ 191 (463)
.+|+.- +|... +.. . +.. .. +.|++.+.... ..
T Consensus 138 r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~le~~l~~~~--~~ 214 (442)
T PRK13360 138 RTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA-DELERLVTLHD--AS 214 (442)
T ss_pred CcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH-HHHHHHHHhcC--CC
Confidence 456554 33211 000 0 000 13 46677665321 12
Q ss_pred ceeEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.....-.|.. .+.+-+++|.++|++||+++|+||++..+.-.+ .. +.. ..+++ .. .| .+
T Consensus 215 ~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG-~~---~a~--~~~gv--~P---Di--vt 281 (442)
T PRK13360 215 TIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG-AP---FAA--QYFGV--TP---DL--LT 281 (442)
T ss_pred cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cc---hhh--hhcCC--CC---ce--ee
Confidence 46666655445445665 466779999999999999999999997642211 11 111 11211 11 12 48
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
+||.+ + .| +.+|.++ .++++.+.+..- ...+++.+++...++.+.|+ .+++ +.+
T Consensus 282 ~gK~l-~-gG~~P~gav~---~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~-----------~l~~-~~l 344 (442)
T PRK13360 282 CAKGL-T-NGAIPMGAVF---VSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD-----------LYER-EGL 344 (442)
T ss_pred eeecc-c-cCccceEEEE---EcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH-----------HHHh-CCH
Confidence 89998 4 35 6888888 488888777431 22356677888777777763 2222 235
Q ss_pred HHHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
.++.+++-+++.+.|+++ |.+.-+...| ++.-+.+..... +.......+...+.++||++.++.
T Consensus 345 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G-l~~~~~l~~~~~--------~~~~~~~~~~~~l~~~Gvl~~~~~---- 411 (442)
T PRK13360 345 LTRAARLAPYWEDALHSLRDAPHVIDIRNLG-LVGAVELAPRDG--------KPGKRAYEVFLKCFEKGLMIRYTG---- 411 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeeeeeccc-eEEEEEEecCCC--------CcchhHHHHHHHHHHCCcEEEecC----
Confidence 566677777777777654 2221122223 222222211000 000112223345677899997631
Q ss_pred CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 419 ~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..+||+.. .+++|+++++++|.++++++
T Consensus 412 ----~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 412 ----DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ----CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 26999977 89999999999999998653
No 303
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=3e-12 Score=129.79 Aligned_cols=304 Identities=13% Similarity=0.100 Sum_probs=176.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc---C---CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR---G---EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~---~g 155 (463)
++.+.+++.+++.+... ..+... ..+.+.++++.+.+... -.-+.+++++++++|+..+++.... . ++
T Consensus 58 ~p~i~~ai~~q~~~~~~--~~~~~~--~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~ 131 (422)
T PRK05630 58 HPRLKAAAHKQIDTMSH--VMFGGL--THEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPE 131 (422)
T ss_pred CHHHHHHHHHHHHhCCC--cccCCc--CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 67899999888876311 111101 12344556666544311 1236899999999999999986431 1 23
Q ss_pred -CEEEEc----cCcee-----cC---------------------CC-cccCh------HHHHHHHHHHHHhcCCceeEEE
Q 041151 156 -DGVVLL----FHTTW-----KR---------------------QQ-IGVLI------INDLQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 156 -d~Vlvp----~g~~~-----~~---------------------~~-~~~d~------~~~l~~~l~~~~~~~~~~~~i~ 197 (463)
.+|+.- +|... .. .. ...+. .+.+++.+.+ ++.+|+
T Consensus 132 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi 205 (422)
T PRK05630 132 RTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE------TVAAII 205 (422)
T ss_pred CcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh------ceEEEE
Confidence 345553 33221 00 00 01111 0233444433 688887
Q ss_pred EEC-CCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCccc
Q 041151 198 IIN-PGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGY 275 (463)
Q Consensus 198 l~~-p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 275 (463)
+.- ...-.|.. .+.+-+++|.++|++|++++|.||++..+.-. + ..... ..+++ .. .|+ +++|.+
T Consensus 206 ~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Grt-G----~~~a~-~~~gv--~P---Di~--t~gK~l 272 (422)
T PRK05630 206 IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRT-G----ELFAT-LAAGV--TP---DIM--CVGKAL 272 (422)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcC-c----hhhHH-HhcCC--CC---Cee--eeechh
Confidence 774 24545664 56778999999999999999999999764221 1 11111 11211 12 133 789988
Q ss_pred CCCCC-ceeEEEEecCCChhHHHHHHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 041151 276 WGECG-QRGGYFEMTNIPPKTVDEIYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRR 347 (463)
Q Consensus 276 ~g~~G-~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (463)
+ .| ..+|+++ +++++.+.+... ...+++.+++...++.+.|+ .+++ +..+++.++
T Consensus 273 -~-gG~~p~~av~---~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~-----------~l~~-~~~~~~~~~ 335 (422)
T PRK05630 273 -T-GGFMSFAATL---CTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLE-----------IIET-GMWRKQVKR 335 (422)
T ss_pred -h-cCccccceee---ccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHH-----------HHHh-CcHHHHHHH
Confidence 3 46 4788888 588888887531 12466777878777777763 2221 133445566
Q ss_pred HHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcE
Q 041151 348 RARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFH 424 (463)
Q Consensus 348 ~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~ 424 (463)
+.+++.+.|+++ |.+.-+...| ++.-+.+.-+. +...+...+.++||++.+. + +.
T Consensus 336 ~g~~l~~~L~~l~~~~~v~~vRg~G-l~~~ie~~~~~-------------~~~~~~~~~~~~Gl~~~~~-------g-~~ 393 (422)
T PRK05630 336 IEAELIAGLSPLAHLPGVADVRVLG-AIGVVEMEQPV-------------DMEEATQAAVDHGVWLRPF-------G-RL 393 (422)
T ss_pred HHHHHHHHHHHhhcCCCeeeeeccc-cEEEEEECCcc-------------cHHHHHHHHHHCCeEEEec-------C-CE
Confidence 666666655543 3332222333 33333332111 1223445677889999762 1 36
Q ss_pred EEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 425 LRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 425 lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
+|+..+ .+++++++++++|.++++.
T Consensus 394 l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 394 VYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 899988 8999999999999998854
No 304
>PRK07480 putative aminotransferase; Validated
Probab=99.51 E-value=7.2e-12 Score=128.13 Aligned_cols=323 Identities=14% Similarity=0.093 Sum_probs=182.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+++.... +.........+.+..+|+.+.+... -.-+.+++++++++|+..+++.... . +|
T Consensus 68 ~p~v~~Ai~~q~~~~~---~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~ 142 (456)
T PRK07480 68 RKELADAAARQMRELP---YYNTFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQ 142 (456)
T ss_pred CHHHHHHHHHHHHhcC---CcccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6789999988887631 1001001123555666666654321 1235899999999999999986531 1 33
Q ss_pred C-EEEEc----cCcee--------c---------CCC-------c------ccCh-------HHHHHHHHHHHHhcCCce
Q 041151 156 D-GVVLL----FHTTW--------K---------RQQ-------I------GVLI-------INDLQQSVAQARSKGITV 193 (463)
Q Consensus 156 d-~Vlvp----~g~~~--------~---------~~~-------~------~~d~-------~~~l~~~l~~~~~~~~~~ 193 (463)
. +|+.- +|... . ..+ + ..+. ++.+++.+... ...++
T Consensus 143 r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~v 220 (456)
T PRK07480 143 KKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNV 220 (456)
T ss_pred CcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcE
Confidence 3 45443 22211 0 000 0 0011 03444444321 11267
Q ss_pred eEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+|++.-...-.|.+ .+.+-+++|.++|++||+++|.||++..+.-.+ ..... ..+|+ ..+ +.+|+
T Consensus 221 AAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-----~~~a~-~~~gv--~PD-----iv~~g 287 (456)
T PRK07480 221 AAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG-----EWFGS-QHFGI--KPD-----LMTIA 287 (456)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc-----chhhh-hhcCC--CCC-----eeeee
Confidence 787776444435664 466679999999999999999999998752111 11111 12211 221 25689
Q ss_pred cccCCCCCc-eeEEEEecCCChhHHHHHHh----h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHH-
Q 041151 273 KGYWGECGQ-RGGYFEMTNIPPKTVDEIYK----I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESL- 345 (463)
Q Consensus 273 K~~~g~~G~-R~G~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 345 (463)
|.+ + .|. .+|.++ +++++.+.+.. . ...+++.+++...++.+.|+ .+++ +.+.++.
T Consensus 288 K~l-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~-----------~l~~-~~l~~~~~ 350 (456)
T PRK07480 288 KGL-T-SGYIPMGAVG---VGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR-----------ILRD-EGIVERVR 350 (456)
T ss_pred hhh-c-cCCccceEEE---EcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHH
Confidence 998 4 464 789888 48888887731 1 22477888888888888874 2221 1234444
Q ss_pred HHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 346 RRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 346 ~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
+++-++|.+.|+++ |-+.-+...| ++.-+.+..+... .....+ ....+...+.++||.+.+. +
T Consensus 351 ~~~g~~l~~~l~~l~~~~~i~~vrG~G-lm~gie~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~-- 419 (456)
T PRK07480 351 DDTGPYLQKRLRELADHPLVGEVRGVG-LVGAIELVKDKAT-----RERFEAGGGVGTICRDHCFANGLIMRAV---G-- 419 (456)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeEEeec-ceEEEEEeccccc-----cccCcchhhHHHHHHHHHHHCCcEEeec---C--
Confidence 34445555555443 2222223334 3333333211100 000000 1233445567899999752 1
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhc
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQYE 455 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 455 (463)
+.+|++.. .+++++++++++|.+++.++.++++
T Consensus 420 ---~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~~~~ 454 (456)
T PRK07480 420 ---DRMIISPPLVITHAEIDELVEKARKALDATAAELG 454 (456)
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 25899988 5999999999999999998876543
No 305
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=1.3e-11 Score=126.35 Aligned_cols=318 Identities=13% Similarity=0.094 Sum_probs=182.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+++++.+++.... +....-..+.+.++++.+.+..+ -..+.+++++++++++..+++.... ....+|+.
T Consensus 89 ~p~v~~Ai~~ql~~~~-----~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~ 161 (459)
T PRK06082 89 HPHVIEKVKEQMAKLP-----FSPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSAIGMALKLARHITGNFKVVS 161 (459)
T ss_pred CHHHHHHHHHHHHhCC-----CccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEE
Confidence 7889999998887631 11111123455566666654422 1236899999999999999986531 12345555
Q ss_pred c----cCcee-----c-----CCC--------------------ccc-------ChHHHHHHHHHHHHhcCCceeEEEEE
Q 041151 161 L----FHTTW-----K-----RQQ--------------------IGV-------LIINDLQQSVAQARSKGITVRAMVII 199 (463)
Q Consensus 161 p----~g~~~-----~-----~~~--------------------~~~-------d~~~~l~~~l~~~~~~~~~~~~i~l~ 199 (463)
- +|... . ... +.- ++ +.+++.++. ..++.+|++.
T Consensus 162 ~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~----~~~vAavIvE 236 (459)
T PRK06082 162 LWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYA-DYLEYVIEK----EGGIGAFIAE 236 (459)
T ss_pred EeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHH-HHHHHHHhc----CCCEEEEEEC
Confidence 3 22211 0 000 100 02 345665542 1256676665
Q ss_pred CCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC
Q 041151 200 NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC 279 (463)
Q Consensus 200 ~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 279 (463)
-..+..+...+.+-+++|.++|++||+++|.||++..+.-. + ..... ..+|+ ..+ |+ +++|.+ | .
T Consensus 237 Pv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRt-G----~~fa~-e~~gv--~PD---iv--~~gKgl-~-g 301 (459)
T PRK06082 237 AVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRT-G----EWFTH-QAYGI--EPD---IL--CIGKGL-G-G 301 (459)
T ss_pred CccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-c----hhhHh-HhhCC--CCC---EE--Eecccc-c-C
Confidence 43443345677788999999999999999999999864221 1 11111 12221 221 33 389999 5 4
Q ss_pred C-ceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 280 G-QRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 280 G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
| +.+|.++. ++++.+.+..... .+++.+++...++.+.|+ .+++ +++.++.+++-++|.+.|+
T Consensus 302 G~~P~~av~~---~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~l~~-~~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 302 GLVPIAAMIT---KDKYNTAAQISLGHYTHEKSPLGCAAALATIE-----------VIEQ-EGLLEKVKADSQFMRERLL 366 (459)
T ss_pred CCCcceEEEE---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHH
Confidence 6 58999884 6665543321111 356678888777777763 2221 2456667777777777776
Q ss_pred cC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 358 SC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 358 ~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
++ |-+.-+...|- ++-+.+..+... ..........+...+.++||.+.+.. .+.+|++.. .
T Consensus 367 ~l~~~~~~i~~vrG~Gl-~~~ve~~~~~~~-----~~~~~~~~~~~~~~~~~~Gvl~~~~~-------~~~i~~~Ppl~i 433 (459)
T PRK06082 367 EMKAKYPLIGDVRGIGL-LWGVELVTDRHT-----KERAYDEAEAVLYRCLNNGLSFKVSQ-------GNVIQLSPPLII 433 (459)
T ss_pred HHHhhCCCeeeeeeccc-eeEEEEccCccc-----cCccHHHHHHHHHHHHhCCCEEEecC-------CCEEEEeCCCcc
Confidence 53 22222333443 333323211100 00000012223345668899987721 136999987 6
Q ss_pred CcCcHHHHHHHHHHHHHHHHHHh
Q 041151 432 AEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
++++++++++++.+++.++.+++
T Consensus 434 t~~eid~~~~~l~~~l~~~~~~~ 456 (459)
T PRK06082 434 TREELTQALAILEEAIAKICQDF 456 (459)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999886654
No 306
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.50 E-value=7e-12 Score=127.92 Aligned_cols=313 Identities=13% Similarity=0.124 Sum_probs=179.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+.+.+.. .++...-..+....+++.+.+... -..+.|++++++++++..+++.... . ++
T Consensus 67 ~p~v~~ai~~ql~~l~----~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~ 140 (445)
T PRK09221 67 RPEIVEAVARQAATLD----YAPAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARGQGT 140 (445)
T ss_pred CHHHHHHHHHHHHhcc----CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6788899988887621 111110112344456666654311 1235899999999999999986431 1 12
Q ss_pred -CEEEEc----cCcee----------cCCCc---------------------cc--------ChHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW----------KRQQI---------------------GV--------LIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~----------~~~~~---------------------~~--------d~~~~l~~~l~~~~~~~~ 191 (463)
.+|+.- +|... ....+ .. .. +.+++.+.... ..
T Consensus 141 r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~--~~ 217 (445)
T PRK09221 141 RTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA-DDLERLVALHD--AS 217 (445)
T ss_pred CcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH-HHHHHHHHhcC--CC
Confidence 355553 22211 00000 00 02 45666665320 12
Q ss_pred ceeEEEEECCCCCCccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.--....|... +.+-+++|.++|++||+++|+||++..+.-. + ..... ..+++ ..+ +.+
T Consensus 218 ~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt-G----~~~~~-~~~gv--~PD-----i~~ 284 (445)
T PRK09221 218 TIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRL-G----AAFAA-ERFGV--TPD-----IIT 284 (445)
T ss_pred cEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcC-c----hhhHH-HhcCC--CCC-----EEE
Confidence 567777765455567654 5667999999999999999999999764211 1 11111 12211 111 357
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
+||.+ + .| +.+|.++ +++++.+.+..- .+.+++.+++...++.+.|+ .+++ +.+
T Consensus 285 ~gK~l-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~-----------~i~~-~~l 347 (445)
T PRK09221 285 FAKGL-T-NGAIPMGAVI---ASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD-----------IYRE-EDL 347 (445)
T ss_pred ecccc-c-cCcccceeeE---EcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH-----------HHHh-ccH
Confidence 89998 4 35 6788887 488888877431 12356677777777766653 2221 245
Q ss_pred HHHHHHHHHHHHHHhhcCCCc---ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 342 LESLRRRARMMTDGFNSCRNV---VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~pg~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
.++.+++-+++.+.|+++.+. .-+...| .+.-+.+..+.. +.......+...+.++||++.++.
T Consensus 348 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~G-l~~~v~~~~~~~--------~~~~~~~~~~~~~~~~Gv~~~~~~---- 414 (445)
T PRK09221 348 FERAAELAPYFEDAVHSLKGLPHVIDIRNIG-LVAGIELAPRPG--------APGARGYEAFMKCFEKGLLVRYTG---- 414 (445)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEecCc-eEEEEEEecccc--------cccchHHHHHHHHHHCCeEEeecC----
Confidence 667777777888877765222 1122223 333322321110 000111223455677899997631
Q ss_pred CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 419 ~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..+|++.. .+++++++++++|.+++.++
T Consensus 415 ----~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 415 ----DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ----CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 26999977 89999999999999998764
No 307
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.50 E-value=2.3e-12 Score=128.33 Aligned_cols=295 Identities=12% Similarity=0.049 Sum_probs=175.5
Q ss_pred CCcHHHHHHHHHHhhhcCCCCCccCC--CCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEc-CCcHHHHHHHHHHHhcCCC
Q 041151 80 VFPADAIARAKHYLSLTSGGLGAYSD--SRGIPGVRKEVAEFIERRDGYPSDP-ELIFLT-DGASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 80 ~~p~~~~~a~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t-~G~~~al~~~~~~l~~~~g 155 (463)
-+|+.+++++.+...... .....++ ..-+.+.|+.++++++ ++. ++|+++ +|++.+++.++..++ .+.
T Consensus 13 ~~~~~v~~a~~~~~~~~~-~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~-~~~ 84 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLF-GTSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLI-EKK 84 (361)
T ss_pred CCCHHHHHHHHhcCcccc-ccCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcc-ccc
Confidence 348888888764311100 0112222 2234567888888876 443 478886 559999999999986 443
Q ss_pred CEEEEc--c-------------Ccee---c-CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 156 DGVVLL--F-------------HTTW---K-RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 156 d~Vlvp--~-------------g~~~---~-~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
..+++. + +.++ + ..+..++. .+.+ ++++|.+++-+|.||...+.++
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~lV~~~h~et~tG~~~pi~~--- 149 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP------QADP------GVDVIAWAHNETSTGVAVPVRR--- 149 (361)
T ss_pred ccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC------ccCC------CCCEEEEcccCCccceeccccc---
Confidence 323322 1 1222 1 11222222 1222 7999999999999999999554
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
| ++++|+++++|.+.+... .+..+.. -.+++.|..|++ |.+|. ++.+++ +++++
T Consensus 150 I---~~~~g~~~iVDavqs~g~-----~~idv~~-------------~D~~~~s~~K~l-g~~~G-l~~~~~---s~~~~ 203 (361)
T TIGR01366 150 P---EGSDDALVVIDATSGAGG-----LPVDIAE-------------TDVYYFAPQKNF-ASDGG-LWLAIM---SPAAL 203 (361)
T ss_pred c---cccCCCeEEEEcCccccC-----CCCCHHH-------------CCEEEEEchhhc-CCCCc-eEEEEE---CHHHH
Confidence 3 478999999999988632 2233332 136889999999 66642 555553 77777
Q ss_pred HHHHhhhh----------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHH
Q 041151 297 DEIYKIAS----------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMM 352 (463)
Q Consensus 297 ~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 352 (463)
+++..... ...+++...-.++.++++ ...++ .+.+.+++++..+++
T Consensus 204 ~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~----------~l~~~gg~e~~~~r~~~l~~~l 273 (361)
T TIGR01366 204 ERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQID----------WMNGNGGLDWAVARTADSSSRL 273 (361)
T ss_pred hhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHH
Confidence 66652210 011222222223344432 12222 455667888889999
Q ss_pred HHHhhcCCCcccccC-C---ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEE
Q 041151 353 TDGFNSCRNVVCNFT-E---GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTT 428 (463)
Q Consensus 353 ~~~L~~~pg~~~~~~-~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis 428 (463)
++.|.+.++++.... . ...... +.++.++ +..+ +...|+++||.+.++... . +...+|+|
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~s~~v~~--v~~~~g~----------~~~~-v~~~L~~~gI~i~~~~~~--l-~~~~vRis 337 (361)
T TIGR01366 274 YSWAQERPYATPFVTDPGKRSQVVGT--IDFVDDI----------DAAT-VAKILRANGIVDTEPYRK--L-GRNQLRVA 337 (361)
T ss_pred HHHHHhCCCcccCCCChhhcccceEE--EECCCcc----------CHHH-HHHHHHHCCCeeccCccc--c-CCCcEEEE
Confidence 999998855554421 1 111122 2233321 2334 445567889999776422 1 23479999
Q ss_pred ec--CCcCcHHHHHHHHHHHHHH
Q 041151 429 IL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 429 ~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
+. ++.+|++++++.|++++++
T Consensus 338 ~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 338 MFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhh
Confidence 99 8999999999999998765
No 308
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=9.5e-12 Score=127.15 Aligned_cols=314 Identities=14% Similarity=0.080 Sum_probs=184.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh-----c-CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI-----R-GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-----~-~~g 155 (463)
++.+.+++.+++.+..... .+ .. ..+.+.++|+.+.+..+ ..-+.+++++++++|+..+++... + .+|
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~-~~--~~-~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~ 145 (453)
T PRK06943 72 NPRINAALKDQLDTLEHAM-LA--GC-THEPAIELAERLAALTG--GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGD 145 (453)
T ss_pred CHHHHHHHHHHHHhcCCcc-cc--cc-CCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 7889999988887631111 11 11 12455566666654322 112589999999999999999752 0 123
Q ss_pred -CEEEEc----cCcee-------------------------c-CCCc----c--------cChHHHHHHHHHHHHhcCCc
Q 041151 156 -DGVVLL----FHTTW-------------------------K-RQQI----G--------VLIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~-~~~~----~--------~d~~~~l~~~l~~~~~~~~~ 192 (463)
.+|+.- +|... + .+.. . -++ +.+++.+... +.+
T Consensus 146 r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~---~~~ 221 (453)
T PRK06943 146 KREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARAL-ADVRRLFAER---AGK 221 (453)
T ss_pred CCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHH-HHHHHHHHhC---CCc
Confidence 455554 33221 0 0000 0 123 5566666531 236
Q ss_pred eeEEEEEC-CCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 193 VRAMVIIN-PGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 193 ~~~i~l~~-p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
+.+|++.- ...-.|. ..+.+-+++|.++|++||+++|.||++..+.-. + .+... ..+|+ ..+ | -+
T Consensus 222 iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt-G----~~fa~-~~~gv--~PD---i--vt 288 (453)
T PRK06943 222 IAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT-G----TFFAC-EQAGV--WPD---F--LC 288 (453)
T ss_pred eEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC-c----chhHH-HhCCC--CCC---e--Ee
Confidence 78877774 2444565 467788999999999999999999999875221 1 11111 12221 221 2 34
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGIL 342 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 342 (463)
++|.+ + .| +.+|.++ +++++.+.+..- ...+++.+++...++.+.|+ .+++ +++.
T Consensus 289 ~gKgl-~-gG~~Pi~av~---~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~i~~-~~l~ 351 (453)
T PRK06943 289 LSKGI-S-GGYLPLSLVL---SRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD-----------LFAE-DDVL 351 (453)
T ss_pred eehhh-c-cCcccceEEE---EcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHH
Confidence 69999 5 58 5899998 488888877531 22466778888888887764 2221 2344
Q ss_pred HHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 343 ESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 343 ~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
++.+++-++|.+.|+++ |++.-+...|- +.-+.+..+... .......+...+.++||++.+.
T Consensus 352 ~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl-~~gvel~~~~~~--------~~~~~~~i~~~~~~~Gll~~~~------ 416 (453)
T PRK06943 352 ARNARKSARLRAALAPLAAHPQVRHLRQRGT-IFAFDVALDGDA--------ARTFSRRFFEAALERELLLRPI------ 416 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEeEecccc-EEEEEEccCCCc--------chHHHHHHHHHHHHCCcEEEec------
Confidence 55555556666666543 44443333443 333223211000 0001222345567889999763
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+ +.+|++.. .+++++++++++|.++++++..
T Consensus 417 -g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 417 -G-TTVYLMPPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred -C-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 25899955 8999999999999999988743
No 309
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.49 E-value=5.5e-12 Score=128.18 Aligned_cols=306 Identities=13% Similarity=0.080 Sum_probs=176.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+.......+... +....+++.+.+..+ -.-+.|++++++++++..+++.... .+|
T Consensus 63 ~p~v~~ai~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~--~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~ 136 (427)
T TIGR00508 63 HPRLNAAAQKQIDKMSHVMFGGFTH----KPAIELCQKLVKMTP--NALDCVFLADSGSVAVEVALKMALQYWQAKGEKN 136 (427)
T ss_pred CHHHHHHHHHHHHhcCCccccccCC----HHHHHHHHHHHhhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCC
Confidence 6789999988887631111111111 223344554443211 1226899999999999999886431 123
Q ss_pred -CEEEEc----cCcee----------------------------cCCCcc-----cChHHHHHHHHHHHHhcCCceeEEE
Q 041151 156 -DGVVLL----FHTTW----------------------------KRQQIG-----VLIINDLQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 156 -d~Vlvp----~g~~~----------------------------~~~~~~-----~d~~~~l~~~l~~~~~~~~~~~~i~ 197 (463)
..|+.- +|... +...+. -|+ +++++.+... +.++.+|+
T Consensus 137 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~l~~~l~~~---~~~vaavi 212 (427)
T TIGR00508 137 RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAI-TPLAKLMELH---SDEIAAVI 212 (427)
T ss_pred ccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHH-HHHHHHHHhc---CCcEEEEE
Confidence 345553 22111 000010 134 6666666532 12566666
Q ss_pred EECC-CCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCccc
Q 041151 198 IINP-GNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGY 275 (463)
Q Consensus 198 l~~p-~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 275 (463)
+..- .+-.|. ..+.+.+++|.++|++|++++|+||++..+... +... ... .+++ .. .|+ ++||.+
T Consensus 213 vEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~-G~~~-~~~----~~~v--~p---Di~--~~gK~l 279 (427)
T TIGR00508 213 LEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRT-GKLF-ACE----HAGV--VP---DIL--CVGKAL 279 (427)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-Cccc-hhh----hcCC--CC---CEE--Eechhh
Confidence 6532 443454 557899999999999999999999999664321 1111 111 1111 12 133 379999
Q ss_pred CCCCCc-eeEEEEecCCChhHHHHHHhh------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 041151 276 WGECGQ-RGGYFEMTNIPPKTVDEIYKI------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRR 348 (463)
Q Consensus 276 ~g~~G~-R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (463)
+ .|+ .++.++ .++++.+.+... ...++..+++...++.+.|+ .++. ....++.+++
T Consensus 280 -~-gG~~p~~a~~---~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~l~~-~~~~~~~~~~ 342 (427)
T TIGR00508 280 -T-GGYMTLSATV---TTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA-----------ILLE-GEWQKQVSAI 342 (427)
T ss_pred -h-cCcccceEEE---EcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHH
Confidence 4 575 577777 488888888642 22345567777777777763 2221 2345667777
Q ss_pred HHHHHHHhhcCC---CcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEE
Q 041151 349 ARMMTDGFNSCR---NVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHL 425 (463)
Q Consensus 349 ~~~l~~~L~~~p---g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~l 425 (463)
.++|.+.|+++. .+.-....| .+.-+.+..+. .... +...|.++||.+.+.. ..+
T Consensus 343 ~~~l~~~L~~l~~~~~i~~vrg~G-~~~~i~~~~~~------------~~~~-~~~~l~~~Gv~~~~~~--------~~l 400 (427)
T TIGR00508 343 ENQLKRELSPLRKNPVVKDVRVLG-AIGVVEMYKPV------------NVEE-LQKKFVEQGVWIRPFG--------KLI 400 (427)
T ss_pred HHHHHHHHHHhhcCCCEEeEeccc-cEEEEEECCcc------------CHHH-HHHHHHHCCeEEEecC--------CEE
Confidence 777888777652 111111223 33332232111 1233 4455777899997631 258
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 426 RTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 426 Ris~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
|++.. .+++||+++++++.+++++
T Consensus 401 ~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 401 YVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99888 8999999999999998854
No 310
>PRK06917 hypothetical protein; Provisional
Probab=99.49 E-value=1.7e-11 Score=125.24 Aligned_cols=326 Identities=11% Similarity=0.108 Sum_probs=185.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++... .+.+..... .+.+.++|+.+.+... -.-+.+++++++++|+..+++.... .+|
T Consensus 49 hp~v~~Ai~~ql~~~---~~~~~~~~~-~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~ 122 (447)
T PRK06917 49 VKEIADAIKEQAEEV---SFVYRSQFT-SEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQG 122 (447)
T ss_pred CHHHHHHHHHHHhhC---cCccccccC-CHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCC
Confidence 788999998888762 111111111 3455566666654321 1225789999999999999997620 133
Q ss_pred -CEEEEc----cCcee---------------------------cC-CCc--cc--------ChHHHHHHHHHHHHhcCCc
Q 041151 156 -DGVVLL----FHTTW---------------------------KR-QQI--GV--------LIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 156 -d~Vlvp----~g~~~---------------------------~~-~~~--~~--------d~~~~l~~~l~~~~~~~~~ 192 (463)
.+|+.- +|... +. ... +- +. +.+++.++... ..+
T Consensus 123 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~le~~i~~~~--~~~ 199 (447)
T PRK06917 123 KHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACA-TELETAIERIG--AEH 199 (447)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHH-HHHHHHHHhcC--CCc
Confidence 455553 22211 00 000 00 12 45555555321 125
Q ss_pred eeEEEEEC-CCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 193 VRAMVIIN-PGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 193 ~~~i~l~~-p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
+.+|++.- +.|--|. ..+.+-+++|.++|++||+++|.||++..+.-. + ..... ..+++ ..+ | .+
T Consensus 200 iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt-G----~~~a~-~~~gv--~PD---i--~~ 266 (447)
T PRK06917 200 IAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT-G----AMFAM-EHWGV--EPD---I--MT 266 (447)
T ss_pred eEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc-c----chhhH-HhcCC--CCC---E--EE
Confidence 77777763 3333344 456888999999999999999999999864211 1 11111 12211 221 2 56
Q ss_pred CCcccCCCCCc-eeEEEEecCCChhHHHHHHhh-----hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHH
Q 041151 271 VSKGYWGECGQ-RGGYFEMTNIPPKTVDEIYKI-----ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILES 344 (463)
Q Consensus 271 ~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (463)
++|.+ + .|. .+|.++ +++++.+.+... ...+++.+++...++.+.|+ .+. .+.+.++
T Consensus 267 ~gK~l-~-~G~~Pi~a~~---~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~-----------~l~-~~~l~~~ 329 (447)
T PRK06917 267 LGKGL-G-AGYTPIAATV---VSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLE-----------YME-KHNLPEK 329 (447)
T ss_pred eeehh-c-cCCcceEEEE---EcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHH-----------HHH-HCCHHHH
Confidence 79999 4 575 889998 488888877532 12356778888888777763 222 1235556
Q ss_pred HHHHHHHHHHHhhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCCCC
Q 041151 345 LRRRARMMTDGFNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 345 ~~~~~~~l~~~L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
.+++-+.|.+.|+++ |-+.-+...|- ++.+.+.-+... .....+ -...+...+.++||++.+...-.
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl-~~~ie~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 330 AAEKGEYLIKGLQKVQQQSTIIGDVRGKGL-LIGVEFVADKKT-----KQPFSKSQAVASELISVAAKNGLLLYPAVAGQ 403 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeecce-EEEEEEeccCCc-----CCCCcchhHHHHHHHHHHHhCCcEEEeccccc
Confidence 666666777766653 22222233343 333333111000 000000 12233455677899998742110
Q ss_pred CCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 418 QKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 418 ~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.....+.+|++.. .+++|+++++++|.++++++.+
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 0011247999988 8999999999999999988744
No 311
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.49 E-value=5e-13 Score=117.84 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------cCcee---c-CCC
Q 041151 109 IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------FHTTW---K-RQQ 170 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~g~~~---~-~~~ 170 (463)
+.++++.++++++ .+++++++++|+++++..++.++. +++++|+++ .|.++ + ...
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence 3578889998874 567899999999999999999997 789999996 23333 2 112
Q ss_pred cccCh-HHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 171 IGVLI-INDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 171 ~~~d~-~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
...+. ++.+++.... .+++++++++++||+|...+. ++|.++|+++++++|+|++|..+.... .. ...
T Consensus 75 ~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~-~~-~~~- 143 (170)
T cd01494 75 GYGGLDVAILEELKAK-----PNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPA-PG-VLI- 143 (170)
T ss_pred Cccchhhhhhhhcccc-----CceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccc-cc-ccc-
Confidence 11221 0244443322 278999999999999999884 777778889999999999999875521 11 011
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
...+..+++.|++|.+ +. .++|++++
T Consensus 144 ----------~~~~~d~~~~s~~K~~-~~--~~~G~l~~ 169 (170)
T cd01494 144 ----------PEGGADVVTFSLHKNL-GG--EGGGVVIV 169 (170)
T ss_pred ----------ccccCCEEEEEccccc-CC--CceEEEEe
Confidence 1122458889999998 53 67999974
No 312
>PRK07678 aminotransferase; Validated
Probab=99.49 E-value=1.9e-11 Score=124.99 Aligned_cols=323 Identities=11% Similarity=0.072 Sum_probs=181.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+.+.... .++.... .+...++|+.+.+..+ ..+.+++++++++|+..+++.... .+|
T Consensus 65 ~p~v~~ai~~q~~~~~----~~~~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~ 136 (451)
T PRK07678 65 RKELAEAAYEQLKTLS----YFPLTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANETAFKIARQYHAQKGEPH 136 (451)
T ss_pred CHHHHHHHHHHHHhcC----ccccccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6788899988887631 1111112 2334456666554322 124899999999999999986531 123
Q ss_pred -CEEEEc----cCcee-------------------------c-CCCcc---------cCh--HHHHHHHHHHHHhcCCce
Q 041151 156 -DGVVLL----FHTTW-------------------------K-RQQIG---------VLI--INDLQQSVAQARSKGITV 193 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~-~~~~~---------~d~--~~~l~~~l~~~~~~~~~~ 193 (463)
.+|+.- +|... + .+.+. .|. ++.+++.+... .+.++
T Consensus 137 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~i 214 (451)
T PRK07678 137 RYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETI 214 (451)
T ss_pred CcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCce
Confidence 345543 22111 0 00000 011 02245555421 11267
Q ss_pred eEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
-+|++.-...-.|.+ .+.+-++++.++|++||+++|.||++..+.-.+ .+... ..+|+ ..+ | -+++
T Consensus 215 AAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG-----~~~~~-~~~gv--~PD---i--vt~g 281 (451)
T PRK07678 215 AAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG-----KAFGF-MNYGV--KPD---I--ITMA 281 (451)
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc-----hhHHH-HhcCC--CCC---E--EEee
Confidence 787776333334655 567789999999999999999999997752211 11111 12222 221 2 3689
Q ss_pred cccCCCCC-ceeEEEEecCCChhHHHHHHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHH
Q 041151 273 KGYWGECG-QRGGYFEMTNIPPKTVDEIYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILES 344 (463)
Q Consensus 273 K~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (463)
|.+ | .| +.+|.++ +++++.+.+..- ...+++.+++...++.+.|+ .+++ +.+.++
T Consensus 282 K~l-g-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~-----------~l~~-~~~~~~ 344 (451)
T PRK07678 282 KGI-T-SAYLPLSATA---VKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE-----------IMEN-ENLIER 344 (451)
T ss_pred ccc-c-cCCcceeEEE---EcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHH
Confidence 999 4 46 6899998 488888887531 23467788888888887764 2221 234555
Q ss_pred HHHHHHHHHHHhhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC
Q 041151 345 LRRRARMMTDGFNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE 420 (463)
Q Consensus 345 ~~~~~~~l~~~L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 420 (463)
.++.-++|.+.|++ .|-+.-+...|.++ -+.+.-+... ...........+...+.++||++.+.... .+.
T Consensus 345 ~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~-~i~~~~~~~~----~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~-v~~ 418 (451)
T PRK07678 345 SAQLGELLLEQLKEELGEHPLVGDIRGKGLLV-GIELVNDKET----KEPADNDKVASVVAACKEKGLIIGKNGDT-VAG 418 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEeeceEE-EEEEecCCcc----cCcCchHHHHHHHHHHHHCCcEEeecCcc-ccC
Confidence 56665666666643 33222233344333 2222111000 00000001223445567789999763211 111
Q ss_pred CCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 421 GIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 421 ~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+...+|++.. .+++||++++++|.++++++
T Consensus 419 ~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 419 YNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 2347999988 69999999999999998764
No 313
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=1.6e-11 Score=125.54 Aligned_cols=322 Identities=11% Similarity=-0.026 Sum_probs=178.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+.+.......|.. .+...++++.+.+..+ ...+.+++++++++|+..+++....-.| ..|+.
T Consensus 71 ~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~ 144 (457)
T PRK05639 71 HPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILA 144 (457)
T ss_pred CHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEE
Confidence 678999998888762111112221 2344456666544321 1225899999999999999987531123 44554
Q ss_pred c----cCcee--------------------------cC-CC----cc----cChHH--------HHHHHHHHHHhcCCce
Q 041151 161 L----FHTTW--------------------------KR-QQ----IG----VLIIN--------DLQQSVAQARSKGITV 193 (463)
Q Consensus 161 p----~g~~~--------------------------~~-~~----~~----~d~~~--------~l~~~l~~~~~~~~~~ 193 (463)
- +|... +. +. +. -|. + .+++.+........++
T Consensus 145 ~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~l~~~~~~~~~i 223 (457)
T PRK05639 145 FIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEP-DELINRFLDYLENYVFSHVVPPDEV 223 (457)
T ss_pred ECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCH-HHHHHHHHHHHHHHHHHhhcCCCce
Confidence 3 22111 00 00 00 012 2 2333332110012367
Q ss_pred eEEEEECCCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+|++.--..-.|. ..+.+-+++|.++|++||+++|.||++..+.-. ...... ..+++ .. .|++ ++
T Consensus 224 AAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt-----G~~~a~-~~~gv--~P---Div~--~g 290 (457)
T PRK05639 224 AALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRT-----GKWFAS-EWFEV--KP---DLII--FG 290 (457)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcC-----chHHHH-HhcCC--CC---CEEE--ec
Confidence 88777643444566 456778999999999999999999999864221 111111 12221 12 2333 89
Q ss_pred cccCCCCCceeEEEEecCCChhHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 041151 273 KGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMM 352 (463)
Q Consensus 273 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (463)
|.+ + .|+.+|.++ +++++.+........+++.+++...++.+.|+ .++ .+.+.++.+++-++|
T Consensus 291 K~l-~-gG~pi~av~---~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~l~-~~~l~~~~~~~g~~l 353 (457)
T PRK05639 291 KGV-A-SGMGLSGVI---GRKELMDLTSGSALLTPAANPVISAAAEATLE-----------IIE-EENLLKNALKVGEFI 353 (457)
T ss_pred hhh-c-CCCcceeEE---ehHHHHhhcCCCcccCCCcCHHHHHHHHHHHH-----------HHH-HccHHHHHHHHHHHH
Confidence 999 4 588899998 58888773211111355667777666666653 222 123445555566667
Q ss_pred HHHhhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEE
Q 041151 353 TDGFNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTT 428 (463)
Q Consensus 353 ~~~L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis 428 (463)
.+.|+++ |-+.-+...| .++-+.+..+... ........+...+.++||++.+.. . +.+.+|++
T Consensus 354 ~~~L~~l~~~~~~~~~VrG~G-l~~gve~~~~~~~-------~~~~~~~~~~~~~~~~Gv~~~~~g---~--~~~~lr~~ 420 (457)
T PRK05639 354 KKRLLEMKESFEVIGDVRGKG-LMIGVEIVKENGK-------PDPELTGKICWRAFELGLILPSYG---M--FGNVIRIT 420 (457)
T ss_pred HHHHHHHHHhCCCEEeeccce-eEEEEEEecCCCC-------CCHHHHHHHHHHHHhCCeEEeecC---C--CCCEEEEe
Confidence 7766653 2122223334 3333222211100 000012233455667899997642 1 22479999
Q ss_pred ec--CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 429 IL--PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 429 ~~--~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.. .+++|+++++++|.+++++..+.
T Consensus 421 Ppl~it~~~id~~~~~l~~~l~~~~~~ 447 (457)
T PRK05639 421 PPLVITKEIAEKGLEIMERAIKDALAG 447 (457)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 99 89999999999999999887543
No 314
>PRK05965 hypothetical protein; Provisional
Probab=99.49 E-value=1.7e-11 Score=125.66 Aligned_cols=318 Identities=14% Similarity=0.108 Sum_probs=183.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+++.+.......|. . ..+.+..+|+.+.+.. +-..+.+++++++++|+..+++.... + ++
T Consensus 64 ~p~i~~Ai~~q~~~~~~~~~~~~--~-~~~~~~~lae~L~~~~--p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~ 138 (459)
T PRK05965 64 QESIVEAAAEQMRELPYATGYFH--F-GSEPAIRLAAKLAERA--PGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPS 138 (459)
T ss_pred CHHHHHHHHHHHHhcCCcccccc--c-CCHHHHHHHHHHHhhC--CCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCC
Confidence 77899999988876211111111 1 1244445666665431 11335899999999999999986420 1 23
Q ss_pred -CEEEEc----cCcee----------------c--C------CCc------ccC--------hHHHHHHHHHHHHhcCCc
Q 041151 156 -DGVVLL----FHTTW----------------K--R------QQI------GVL--------IINDLQQSVAQARSKGIT 192 (463)
Q Consensus 156 -d~Vlvp----~g~~~----------------~--~------~~~------~~d--------~~~~l~~~l~~~~~~~~~ 192 (463)
.+|+.- +|... + . ..+ .-| + +.+++.+.... ..+
T Consensus 139 r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~--~~~ 215 (459)
T PRK05965 139 KKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV-AALRAKVAELG--ADN 215 (459)
T ss_pred ccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH-HHHHHHHHhcC--CCc
Confidence 345543 22211 0 0 000 012 2 35566665321 126
Q ss_pred eeEEEEECCCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecC
Q 041151 193 VRAMVIINPGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTV 271 (463)
Q Consensus 193 ~~~i~l~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 271 (463)
+.+|++.-.....|. ..+.+-+++|.++|++||+++|.||+...+.-.+ .+... ..+|+ ..+ | -++
T Consensus 216 iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG-----~~~a~-~~~gv--~PD---i--v~~ 282 (459)
T PRK05965 216 VAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG-----PLFAC-EAEGV--VPD---L--MTV 282 (459)
T ss_pred eEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc-----hhhhH-hhcCC--CCC---e--EEe
Confidence 788777744444565 4577789999999999999999999998752211 11111 12221 121 2 457
Q ss_pred CcccCCCCC-ceeEEEEecCCChhHHHHHHh-------h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHH
Q 041151 272 SKGYWGECG-QRGGYFEMTNIPPKTVDEIYK-------I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGIL 342 (463)
Q Consensus 272 SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 342 (463)
+|.+ + .| +.+|.++ +++++.+.+.. . ...+++.++++..++.+.|+ .++ .+++.
T Consensus 283 gKgl-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~-----------~l~-~~~l~ 345 (459)
T PRK05965 283 AKGL-T-SGYVPMGAVL---MSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR-----------LYH-EGGLL 345 (459)
T ss_pred chhh-c-cCCcceeEEE---EcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH-----------HHH-hccHH
Confidence 9999 4 58 4899999 48888887753 1 22467788888888877763 222 22355
Q ss_pred HHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCCC
Q 041151 343 ESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 343 ~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f 416 (463)
++.++.-++|.+.|+++ |.+.-+...| +++-+.+..... ....... -...+...+.++||++.+.
T Consensus 346 ~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G-l~~gie~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~Gll~~~~--- 416 (459)
T PRK05965 346 ANGQKAGPRFAAGLDALRAHPLVGDVRGRG-LLGALELVADKA-----TKTPFDAALDPADRIFDRAYANGLVFRAF--- 416 (459)
T ss_pred HHHHHHHHHHHHHHHhhccCCCEEEEeecc-eEEEEEEecccc-----ccCCCCchhHHHHHHHHHHHhCCeEEEec---
Confidence 55666666777777654 2222223333 333322221100 0000000 1223445567889999762
Q ss_pred CCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 417 GQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 417 ~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+.+.+|+... .+++++++++++|.++++++
T Consensus 417 ----g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 417 ----GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ----CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 2246899977 89999999999999999876
No 315
>PRK07482 hypothetical protein; Provisional
Probab=99.49 E-value=1.7e-11 Score=125.70 Aligned_cols=321 Identities=11% Similarity=-0.024 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+.. ..+.+. .-..+.+..+|+.+.+... -.-+.+++++++++|+..+++.... .++
T Consensus 68 ~p~v~~Av~~q~~~~~-~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~ 142 (461)
T PRK07482 68 RTEVAEAIAEQAKELA-YYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPE 142 (461)
T ss_pred CHHHHHHHHHHHHhcC-cccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCC
Confidence 7889999998887621 011110 1123556667777654321 1236899999999999999997620 122
Q ss_pred -CEEEEc----cCcee-------------------------cCCC-cc-------------cChHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW-------------------------KRQQ-IG-------------VLIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~~~~-~~-------------~d~~~~l~~~l~~~~~~~~ 191 (463)
.+|+.- +|... +... +. .++ +.+++.+... ...
T Consensus 143 r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~--~~~ 219 (461)
T PRK07482 143 KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCA-DELEELILAE--GPD 219 (461)
T ss_pred CceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHH-HHHHHHHHhc--CCC
Confidence 345553 33211 0000 00 034 6667766421 112
Q ss_pred ceeEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.-...-.|.+ .+.+-+++|.++|++||+++|.||++..+.-.+ ..... ..+|+ .. .| -+
T Consensus 220 ~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG-----~~~a~-~~~gv--~P---Di--v~ 286 (461)
T PRK07482 220 TIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG-----SMFGS-DHYGI--EP---DL--IT 286 (461)
T ss_pred cEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc-----chhhH-HhcCC--CC---CE--EE
Confidence 57777776333334665 567789999999999999999999998752211 11111 12221 22 12 34
Q ss_pred CCcccCCCCCc-eeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECGQ-RGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
++|.+ + .|. .+|.++ +.+++.+.+... ...+++.++++..++.+.|+ .++ .+++
T Consensus 287 ~gKgl-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~-----------~~~-~~~l 349 (461)
T PRK07482 287 VAKGL-T-SAYAPLSGSI---VGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD-----------ILE-RENL 349 (461)
T ss_pred Ecccc-c-cCccccceee---ecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH-----------HHH-hCCH
Confidence 79998 4 574 788888 478887777521 22467788888888888763 222 1234
Q ss_pred HHHHHHHHHHHHHHhhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCC
Q 041151 342 LESLRRRARMMTDGFNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGS 414 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~ 414 (463)
.++.++.-++|.+.|++ .|-+.-+...| .+.-+.+..... +......+ ...+...+.++||++.++.
T Consensus 350 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~G-lm~giel~~~~~-----~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~ 423 (461)
T PRK07482 350 VGNAAEVGAYFRARLRAAFGDHPLVGEVRGVG-MLAAVEFVADRD-----DRTPFDPALKIGPQVSAAALERGVIARAMP 423 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEeece-eEEEEEeccCCC-----cCCCCChhhHHHHHHHHHHHHCCcEEecCC
Confidence 55556666666666654 33222233334 333332321100 00000001 1233455667899986522
Q ss_pred CCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 415 GFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 415 ~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+.+.+|+..+ .+++|+++++++|.++++++.+
T Consensus 424 ------~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 424 ------HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1136899866 8999999999999999987643
No 316
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=8.4e-12 Score=126.63 Aligned_cols=315 Identities=12% Similarity=0.044 Sum_probs=179.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++... . .+.. ..+.+.++++.+.+..+ ...+.+.+++++++|+..+++....-.| .+|+.
T Consensus 71 ~p~v~~ai~~q~~~~--~--~~~~---~~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~ 141 (433)
T PRK00615 71 HPKICDAIQQGAERG--T--SYGL---TSEQEILFAEELFSYLG--LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIK 141 (433)
T ss_pred CHHHHHHHHHHHHhC--C--CCCC---CCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEE
Confidence 678999998888762 1 2211 12345556666654322 1225899999999999999986531234 34544
Q ss_pred c----cCce---e-----c--C-----CCc------------c-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 161 L----FHTT---W-----K--R-----QQI------------G-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 161 p----~g~~---~-----~--~-----~~~------------~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
- +|.. . . . ..+ . -|. +.+++.+... +.++.+|++.....-.|.+
T Consensus 142 ~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~---~~~~aavI~Epv~~~~G~~ 217 (433)
T PRK00615 142 FLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDF-QIFQTVMNSL---GHRVAGVIFEPICANMGVV 217 (433)
T ss_pred EcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCH-HHHHHHHHhc---CCceEEEEECCCCCCCCcc
Confidence 3 4422 1 0 0 000 0 156 8888888642 1245666555444445765
Q ss_pred C-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 209 L-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 209 ~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
. +.+-+++|.++|++||+++|.||++..+.. + . .. ....+++ .. .| .+++|.+ | .|+.+|+++
T Consensus 218 ~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~-G-~---~g--a~~~~gv--~P---Di--~~~gK~l-g-gG~p~~av~ 281 (433)
T PRK00615 218 LPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRV-A-Q---GG--AAAIYHV--KP---DI--TVYGKIL-G-GGLPAAAVV 281 (433)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEcccccccc-c-H---hH--HHHhcCC--CC---Ce--EEEcccc-c-CCcceeeee
Confidence 5 466799999999999999999999976522 1 1 11 1122221 12 13 3589999 4 578899998
Q ss_pred ecCCChhHHHHHHhhh----hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---C
Q 041151 288 MTNIPPKTVDEIYKIA----SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---R 360 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---p 360 (463)
+++++.+.+.... ..+++.+++...++.+.|+ .+++ +..++++.++-+++.+.|++. .
T Consensus 282 ---~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~-----------~i~~-~~~~~~~~~~g~~l~~~l~~~~~~~ 346 (433)
T PRK00615 282 ---AHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASIN-----------LCRE-QGFYTQLSTLEQNFLSPIEEMIRSQ 346 (433)
T ss_pred ---ecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHH-----------HHhc-ccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5888988885321 1345567777777777663 2221 234555555655665555432 1
Q ss_pred Cc--ccccCCceeEEeeeccC-Ch-hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcH
Q 041151 361 NV--VCNFTEGAMYSFPQIRL-PP-KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDM 436 (463)
Q Consensus 361 g~--~~~~~~g~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i 436 (463)
|+ .... . |.++.+.+.- +. .+.+.. .............|.++||++.|.. ++. .=+|..++++||
T Consensus 347 g~~v~~~r-~-G~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~------~~ls~~ht~~di 415 (433)
T PRK00615 347 GFPVSLVR-Y-GSMFSFFFNENRPNNLAEAQ--LSDIEAFQTFYQSAFSKGVYLSPSP-FEA------SFLSSAHSMENL 415 (433)
T ss_pred CCCeEEEe-e-ceEEEEEEeCCCCCChHHHh--hCCHHHHHHHHHHHHHCCeeecCcc-ccc------cceecCCCHHHH
Confidence 33 2233 3 3333333321 10 010000 0000012234455667899998744 111 135667899999
Q ss_pred HHHHHHHHHHHHHHH
Q 041151 437 PAIMESFKKFNDEFM 451 (463)
Q Consensus 437 ~~~~~~l~~~l~~~~ 451 (463)
+++++++.+++++..
T Consensus 416 d~~~~a~~~~~~~~~ 430 (433)
T PRK00615 416 DYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 317
>PLN02880 tyrosine decarboxylase
Probab=99.48 E-value=2.2e-10 Score=118.10 Aligned_cols=314 Identities=10% Similarity=0.042 Sum_probs=180.4
Q ss_pred CccCCCCCCHHHHHHHHHHHHHhcCCCCC-----CCcEEEcCCcHHHHHHHHHHHh----cC------CCCEEEEc----
Q 041151 101 GAYSDSRGIPGVRKEVAEFIERRDGYPSD-----PELIFLTDGASKGVMQTLNCVI----RG------EGDGVVLL---- 161 (463)
Q Consensus 101 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~----~~------~gd~Vlvp---- 161 (463)
..|.......++.+.+-+|+.+..|.+-. ...-++|+|+++++..++.+-- +. +.-.|+++
T Consensus 112 ~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH 191 (490)
T PLN02880 112 FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTH 191 (490)
T ss_pred cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCch
Confidence 33433345689999999999998887632 1245678888888777665431 01 11234444
Q ss_pred ---------cCc-----ee-cC---CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh
Q 041151 162 ---------FHT-----TW-KR---QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ 223 (463)
Q Consensus 162 ---------~g~-----~~-~~---~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~ 223 (463)
.|. +. +. .++.+|+ +.|++++++..++|..+-+|+.+...-+||.+-+ +++|+++|++
T Consensus 192 ~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~-~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~ 267 (490)
T PLN02880 192 SALQKACQIAGIHPENCRLLKTDSSTNYALAP-ELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKS 267 (490)
T ss_pred HHHHHHHHHcCCCHHHEEEeecCCCcCCcCCH-HHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHH
Confidence 443 12 22 3578999 9999999987666655666777788889999976 7888889999
Q ss_pred CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh-HHHHHHhh
Q 041151 224 ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK-TVDEIYKI 302 (463)
Q Consensus 224 ~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~-~~~~l~~~ 302 (463)
||+|+.+|-+|+.+... . ........++ .. -.-+..+++|+++ ...-+|++++. ++. +++.+..-
T Consensus 268 ~~iwlHVDaA~gg~~~~-~---~~~~~~l~gi----e~--aDSit~d~HKwl~--~P~~~g~llvr--~~~~l~~~~~~~ 333 (490)
T PLN02880 268 NGMWFHVDAAYAGSACI-C---PEYRHYIDGV----EE--ADSFNMNAHKWFL--TNFDCSLLWVK--DRNALIQSLSTN 333 (490)
T ss_pred cCCEEEEehhhHHHHHh-C---HHHHHHhcCc----hh--cCEEEECchhhcC--CCccEEEEEEe--CHHHHHHHHccC
Confidence 99999999999876431 1 1122222221 11 1246789999874 56668999873 332 23333211
Q ss_pred hhh--c-------------cc---CChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 041151 303 ASI--A-------------LS---PNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGFNSCRNVV 363 (463)
Q Consensus 303 ~~~--~-------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~pg~~ 363 (463)
... . ++ ..++. ++..++. ++.+ .+...++.++.-+.++++.+.|++.|+++
T Consensus 334 ~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~--alklw~~--------l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e 403 (490)
T PLN02880 334 PEFLKNKASQANSVVDYKDWQIPLGRRFR--SLKLWMV--------LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE 403 (490)
T ss_pred HHHhcCccccccCCCChhccCcCCCCccc--HHHHHHH--------HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 110 0 00 00000 1111100 0000 11122233333377888889998888888
Q ss_pred cccC-CceeEEeeeccCChhhHHHHhhcCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHHH
Q 041151 364 CNFT-EGAMYSFPQIRLPPKAIEAAKRAGKVP-DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMPA 438 (463)
Q Consensus 364 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~~ 438 (463)
+..| +.+...| ++. |... +... .+. ...+..++.++..+.+.+.. + .+..++|+++. +++++++.
T Consensus 404 l~~~~~~~iv~F-r~~-~~~~-~~~~---~~~~n~~l~~~l~~~g~~~v~~t~-~---~g~~~lR~~~~n~~tt~~di~~ 473 (490)
T PLN02880 404 VVTPRIFSLVCF-RLV-PPKN-NEDN---GNKLNHDLLDAVNSSGKIFISHTV-L---SGKYVLRFAVGAPLTEERHVTA 473 (490)
T ss_pred EecCCceEEEEE-EEe-CCCC-Chhh---HHHHHHHHHHHHHhCCCEEEEEEE-E---CCEEEEEEEecCCCCCHHHHHH
Confidence 8655 4444332 232 1110 0000 000 12233343444445555433 2 24558999998 56699999
Q ss_pred HHHHHHHHHHHHHH
Q 041151 439 IMESFKKFNDEFME 452 (463)
Q Consensus 439 ~~~~l~~~l~~~~~ 452 (463)
+++.|.+..+++..
T Consensus 474 ~~~~i~~~~~~~~~ 487 (490)
T PLN02880 474 AWKVLQDEASKLLG 487 (490)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887754
No 318
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.47 E-value=4.3e-11 Score=110.45 Aligned_cols=303 Identities=12% Similarity=0.101 Sum_probs=195.7
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCCC---CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDSR---GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~~---g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
+|..+++++... ..+|..++ -..++++-+..-++. .++.-.++...++.+++.++..++ .|||.
T Consensus 28 l~~~V~~A~~~~-------~lgh~sPe~~qIm~~v~egikyVFkT-----~n~~tf~isgsGh~g~E~al~N~l-ePgd~ 94 (385)
T KOG2862|consen 28 LSGRVQEAMSRP-------SLGHMSPEFVQIMDEVLEGIKYVFKT-----ANAQTFVISGSGHSGWEAALVNLL-EPGDN 94 (385)
T ss_pred CCHHHHHhhcCC-------ccccCCHHHHHHHHHHHHHHHHHhcc-----CCCceEEEecCCcchHHHHHHhhc-CCCCe
Confidence 466666665422 23333322 223455555555542 233355666667889999999998 89999
Q ss_pred EEEc---------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHH
Q 041151 158 VVLL---------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREIL 218 (463)
Q Consensus 158 Vlvp---------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~ 218 (463)
|++- +|.++ ..-+....+ +.+.+.+.++ ++++|++++-...||+.-+. ++.+-
T Consensus 95 vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~l-e~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~~--~~~~g 166 (385)
T KOG2862|consen 95 VLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPL-EEITEKLSQH-----KPKAVFVTHGDSSTGVLQDL--LAISG 166 (385)
T ss_pred EEEEEechHHHHHHHHHHhhCceeeEEecCcccCccH-HHHHHHHHhc-----CCceEEEEecCccccccchH--HHHHH
Confidence 9985 77777 445667788 9999999987 89999999999999998653 55566
Q ss_pred HHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH
Q 041151 219 RFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE 298 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 298 (463)
++|++|++++++|-+-+- ++.++. | |+++-.+......|++.+.+|+-+ +. .++...++
T Consensus 167 ~lc~k~~~lllVD~VaSl----ggt~F~--------m----DewgVDvaytgSQKaL~aP~GLsi--is---fS~ka~~~ 225 (385)
T KOG2862|consen 167 ELCHKHEALLLVDTVASL----GGTEFE--------M----DEWGVDVAYTGSQKALGAPAGLSI--IS---FSDKALEA 225 (385)
T ss_pred HHhhcCCeEEEEechhhc----CCccce--------e----hhhcccEEEecchhhcCCCCCcce--ee---cCHHHHHH
Confidence 788999999999998774 223221 2 666666777888899987888544 66 47777777
Q ss_pred HHhhhh------------------------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHH
Q 041151 299 IYKIAS------------------------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE-SKGILESLRRRARMMT 353 (463)
Q Consensus 299 l~~~~~------------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 353 (463)
++..++ .+.+++....+.+.++|. ...++ +++..++.++..++++
T Consensus 226 ~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~----------~I~eeGL~~~~~rH~e~s~~l~ 295 (385)
T KOG2862|consen 226 IRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALA----------LIAEEGLENSWRRHREMSKWLK 295 (385)
T ss_pred HhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH
Confidence 754322 122334444455555543 23333 5667778889999999
Q ss_pred HHhhcCCCcccccC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 354 DGFNSCRNVVCNFT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 354 ~~L~~~pg~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
..|+++ |++.... +-..-..-.+..|.+. |-.+.+..+..++++.+.-|-.-- ....+||.+.
T Consensus 296 ~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv----------Dw~dVv~~~~~~~~vei~gglg~~---~gKv~RIGl~g 361 (385)
T KOG2862|consen 296 LSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV----------DWKDVVAYAMSHYVVEIGGGLGPT---VGKVFRIGLLG 361 (385)
T ss_pred HHHHHh-CccceecChhhccCcceeeecCCCC----------CHHHHHHHHHHhcCEEeccccCCC---cccEEEEEEee
Confidence 999987 7654321 1111111113444432 234556666666677665443322 3348999987
Q ss_pred --CCcCcHHHHHHHHHHHHHH
Q 041151 431 --PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 431 --~~~e~i~~~~~~l~~~l~~ 449 (463)
.+.+.++..++.|+..+.+
T Consensus 362 cna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 362 CNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ccCCcHHHHHHHHHHHHHHhh
Confidence 5667888888888777654
No 319
>PRK06062 hypothetical protein; Provisional
Probab=99.47 E-value=3.1e-11 Score=123.41 Aligned_cols=316 Identities=15% Similarity=0.135 Sum_probs=179.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+.... .+.+.. ..+.+..+|+.+.+... -..+.|++++++++|+..+++....-.| .+|+.
T Consensus 71 ~p~v~~Ai~~q~~~~~----~~~~~~-~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~ 143 (451)
T PRK06062 71 HPKVVAAIQEQAARLC----TVAPAH-ANDARSEAARLIAERAP--GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLS 143 (451)
T ss_pred CHHHHHHHHHHHHhcC----CcCCcc-CCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEE
Confidence 6789999988887621 111111 23455666666654321 1236899999999999999986531123 44554
Q ss_pred c----cCcee--------c-----------------CCCcc------cC-------hHHHHHHHHHHHHhcCCceeEEEE
Q 041151 161 L----FHTTW--------K-----------------RQQIG------VL-------IINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 161 p----~g~~~--------~-----------------~~~~~------~d-------~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
- +|... + ...+. -| + +.+++.++.. ...++.+|++
T Consensus 144 ~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~le~~l~~~--~~~~iAavii 220 (451)
T PRK06062 144 AYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL-AHLERVIELE--GPSTIAAILL 220 (451)
T ss_pred EeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH-HHHHHHHHhc--CCCceEEEEE
Confidence 3 22211 0 00000 01 4 6677777531 0125677766
Q ss_pred ECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 199 INPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 199 ~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
.--..--|.+ .+.+-+++|.++|++||+++|.||++..+.- ...... ...+|+ ..+ +.+++|.+ |
T Consensus 221 EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR-----tG~~~a-~~~~gv--~PD-----i~t~gK~l-g 286 (451)
T PRK06062 221 ESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGR-----TGKWFA-IEHFGV--VPD-----LITFAKGV-N 286 (451)
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCc-----CcHHHH-HHhcCC--CCC-----eeeechhh-h
Confidence 6333334655 4677899999999999999999999987421 111111 122322 221 35789999 4
Q ss_pred CCCc-eeEEEEecCCChhHHHHHHhh---hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHH-HHH
Q 041151 278 ECGQ-RGGYFEMTNIPPKTVDEIYKI---ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRA-RMM 352 (463)
Q Consensus 278 ~~G~-R~G~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 352 (463)
.|+ .+|.++ +++++.+.+... ...+++.+++...++.+.|+ .+++ +.+.++.++.- +++
T Consensus 287 -gG~~Pigav~---~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~-----------~l~~-~~l~~~~~~~G~~~l 350 (451)
T PRK06062 287 -SGYVPLGGVA---ISEAIAATFADRPYPGGLTYSGHPLACAAAVATIN-----------AMEE-EGIVENAARIGAEVL 350 (451)
T ss_pred -cCCcCcEEEE---EcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHH
Confidence 464 888888 477888887532 22466778888878777763 2221 12344444443 345
Q ss_pred HHHhhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCC------hHHHHHHHHHhcCeEeeCCCCCCCCCCC
Q 041151 353 TDGFNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP------DVFYCLRLLEATGISTVPGSGFGQKEGI 422 (463)
Q Consensus 353 ~~~L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 422 (463)
.+.|++ .|.+.-+...|- +.-+.+..+... ...... ....+...+.++||++.+. +
T Consensus 351 ~~~L~~l~~~~~~v~~vrG~Gl-~~gve~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-------~- 416 (451)
T PRK06062 351 GPGLRELAERHPSVGEVRGLGV-FWALELVADRET-----REPLAPYGASSAAMAAVKAACKERGLLPFVN-------G- 416 (451)
T ss_pred HHHHHHHHhcCCcEEeEecccc-EEEEEEcccccc-----cCCCcccchhhHHHHHHHHHHHHCCcEEeec-------C-
Confidence 555544 322222333443 333223211000 000000 1223445567889998652 1
Q ss_pred cEEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 423 FHLRTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 423 ~~lRis~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
+.+|++.. .++++|+++++++.++++++.
T Consensus 417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 417 NRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 26899886 799999999999999987643
No 320
>PRK07036 hypothetical protein; Provisional
Probab=99.47 E-value=2.3e-11 Score=124.86 Aligned_cols=327 Identities=14% Similarity=0.106 Sum_probs=186.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+++.... ....+.. -..+.+..+|+.+.+.. +-..+.+++++++++|+..+++.... . +|
T Consensus 69 ~p~v~~Ai~~q~~~~~-~~~~~~~--~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~ 143 (466)
T PRK07036 69 REEMADAIADQARRLP-YYTPFGD--MTNAPAAELAAKLAELA--PGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPA 143 (466)
T ss_pred CHHHHHHHHHHHHhCc-ccccccc--cCCHHHHHHHHHHHHhC--CCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCC
Confidence 6789999988877621 1111110 12345566777665431 11235899999999999999986420 1 22
Q ss_pred -CEEEEc----cCcee--------c------------------CC----CcccCh-------HHHHHHHHHHHHhcCCce
Q 041151 156 -DGVVLL----FHTTW--------K------------------RQ----QIGVLI-------INDLQQSVAQARSKGITV 193 (463)
Q Consensus 156 -d~Vlvp----~g~~~--------~------------------~~----~~~~d~-------~~~l~~~l~~~~~~~~~~ 193 (463)
.+|+.- +|... + .+ .++... ++.+++.+... ...++
T Consensus 144 r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~i 221 (466)
T PRK07036 144 KKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--GADNI 221 (466)
T ss_pred ccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc--CCCce
Confidence 455553 33221 0 00 011111 02344444321 11257
Q ss_pred eEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+|++.-...-.|.. .+.+-+++|.++|++||+++|.||++..+.-.+ .+......+|+ ..+ +.+++
T Consensus 222 Aavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-----~~~~~~~~~gv--~PD-----ivt~g 289 (466)
T PRK07036 222 AAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG-----HFFASEAVFGI--QPD-----IITFA 289 (466)
T ss_pred EEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc-----hhhhhhhhcCC--CCC-----EEEEc
Confidence 777777444445654 567789999999999999999999997652111 11111111211 221 24679
Q ss_pred cccCCCCC-ceeEEEEecCCChhHHHHHHhh-------h-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHH
Q 041151 273 KGYWGECG-QRGGYFEMTNIPPKTVDEIYKI-------A-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILE 343 (463)
Q Consensus 273 K~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-------~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (463)
|.+ + .| +.+|.++ +++++.+.+... . ..+++.+++...++.+.|+ .++ .+++.+
T Consensus 290 K~l-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le-----------~i~-~~~l~~ 352 (466)
T PRK07036 290 KGL-T-SGYQPLGAVI---ISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE-----------IME-REGLCE 352 (466)
T ss_pred ccc-c-cCccccEEEE---EcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH-----------HHH-hCCHHH
Confidence 998 4 57 4899998 488888887531 1 2366778888888877763 222 123555
Q ss_pred HHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCCCCC
Q 041151 344 SLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 344 ~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
+.++.-++|.+.|+++ |-+.-+...| .++.+.+..+... ......+ ...+...+.++||++.+. +
T Consensus 353 ~~~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~~ve~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~ 423 (466)
T PRK07036 353 HVREVGPYFEERLASLRELPLVGDVRGDH-LMACVECVADKGS-----KALLPEDIAIGQRIDRHCQERGLLVRPL---E 423 (466)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeec-eEEEEEEccCccc-----cCCCCchhHHHHHHHHHHHHCCcEEeec---C
Confidence 5666666666666543 2222223333 3444333211100 0000001 223345577889999762 1
Q ss_pred CCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhcccc
Q 041151 418 QKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQYEDYR 458 (463)
Q Consensus 418 ~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~~~~ 458 (463)
+.+|++.. .+++|+++++++|.++++++.+.-++++
T Consensus 424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~~~~~~ 461 (466)
T PRK07036 424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEETADELAAHG 461 (466)
T ss_pred -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 25889877 6999999999999999998877655554
No 321
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.47 E-value=3.2e-11 Score=122.76 Aligned_cols=312 Identities=13% Similarity=0.116 Sum_probs=182.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+++... ....+ ..+.+.++++.+.+... ..+.+++++++++|+..+++....-.| .+|+.
T Consensus 71 ~p~v~~ai~~q~~~~--~~~~~-----~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~ 140 (428)
T PRK12389 71 HPHITKAITEAAENG--VLYGT-----PTELEIEFAKMLKEAIP---SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIK 140 (428)
T ss_pred CHHHHHHHHHHHHhC--CccCC-----CCHHHHHHHHHHHHhCC---CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 678899998888762 11111 12445566666654321 246899999999999999986531123 44554
Q ss_pred c----cCcee-----cC-----------CCc------------ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 161 L----FHTTW-----KR-----------QQI------------GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 161 p----~g~~~-----~~-----------~~~------------~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
- +|... .. .++ -.|. +.+++.+... +.++.+|++.-...-.|.+
T Consensus 141 ~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~---~~~vaavi~EPv~g~~G~~ 216 (428)
T PRK12389 141 FAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDI-EALKEALDKW---GDEVAAVLVEPIVGNFGIV 216 (428)
T ss_pred ECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCH-HHHHHHHHhc---CCcEEEEEEeCCCCCCCCc
Confidence 3 22211 00 000 1167 8888888642 1256777776444545765
Q ss_pred C-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 209 L-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 209 ~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
. +.+.+++|.++|++||+++|.||++..+..+ . ... ...+|+ ..+ | .+++|.+ | .|+.+|.++
T Consensus 217 ~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~--~---~~a--~~~~gv--~PD---i--vt~gK~l-g-gG~Pi~av~ 280 (428)
T PRK12389 217 EPKPGFLEAVNELAHEAGALVIYDEVITAFRFM--Y---GGA--QDLLGV--EPD---L--TALGKII-G-GGLPIGAYG 280 (428)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEccccccccC--c---chh--hHHhCC--CCC---e--eeechhh-c-CCCceeEEe
Confidence 4 6777999999999999999999999875321 0 111 111211 121 2 4789999 4 589999997
Q ss_pred ecCCChhHHHHHHhh----hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----C
Q 041151 288 MTNIPPKTVDEIYKI----ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----C 359 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 359 (463)
+++++.+.+... ...+++.+++...++.+.|+ .+++ +.+.++.+++-++|.+.|++ .
T Consensus 281 ---~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~-----------~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~ 345 (428)
T PRK12389 281 ---GRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLE-----------VLQQ-EGVYEKLDRLGAMLEEGILEAAEKH 345 (428)
T ss_pred ---EHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHH-----------HHhc-ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 588888887531 22356778888877777764 2221 23555666666677666654 3
Q ss_pred CC-cccccCCceeEEeeecc-CCh-hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcH
Q 041151 360 RN-VVCNFTEGAMYSFPQIR-LPP-KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDM 436 (463)
Q Consensus 360 pg-~~~~~~~g~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i 436 (463)
|- ..+....| ++. +.+. -+. ...+. + .........+...+.++||++.+.. . + .+.+++..+++|+
T Consensus 346 ~~~~~v~r~~g-~~g-i~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~Gv~~~~~~---~--~--~~~~~l~~t~e~i 414 (428)
T PRK12389 346 GITITINRLKG-ALT-VYFTDEKVTNYDQA-E-RSDGEAFGKFFKLMLNQGINLAPSK---Y--E--AWFLTTAHTEEDI 414 (428)
T ss_pred CCCEEEEecCc-EEE-EEEeCCCCCChhhh-c-ccCHHHHHHHHHHHHHCCcEeecCC---C--C--CeeecCCCCHHHH
Confidence 21 12222233 332 1121 110 00000 0 0000012334456777899998842 1 1 2567777899999
Q ss_pred HHHHHHHHHHHHH
Q 041151 437 PAIMESFKKFNDE 449 (463)
Q Consensus 437 ~~~~~~l~~~l~~ 449 (463)
+++++++.+++++
T Consensus 415 d~~~~~l~~~l~~ 427 (428)
T PRK12389 415 EETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 322
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.47 E-value=1e-11 Score=127.17 Aligned_cols=312 Identities=13% Similarity=0.103 Sum_probs=183.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+... . .+.. ..++..++|+.+.+... ..+.+.+++++++|+..+++....-.| .+|+.
T Consensus 117 ~p~v~~av~~ql~~~--~--~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~ 186 (474)
T PLN02482 117 DDEVLAALAETMKKG--T--SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEACMGVLRLARAYTGREKIIK 186 (474)
T ss_pred CHHHHHHHHHHHhhC--C--CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEE
Confidence 688999999888762 1 2222 12566667777765421 147999999999999999986531123 45554
Q ss_pred c----cCce----------------e-----cC----CC--cc-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 161 L----FHTT----------------W-----KR----QQ--IG-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 161 p----~g~~----------------~-----~~----~~--~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
- +|.. . +. +. .. -|+ +.+++.+... +.++.+|++.-...-.|.+
T Consensus 187 ~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~-~~l~~~l~~~---~~~iAavI~Epv~g~~G~i 262 (474)
T PLN02482 187 FEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDL-EAVKKLFEAN---KGEIAAVILEPVVGNSGFI 262 (474)
T ss_pred ECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCCh-HHHHHHHHhC---CCceEEEEECCCCCCCCCc
Confidence 3 3311 0 00 00 00 167 8899888642 1246666665434445766
Q ss_pred CC-HHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 209 LS-EANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 209 ~s-~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
.+ .+.+++|.++|++||+++|+||++..+.. +. .... ..+|+ .. . +.+|+|.+ | .|+.+|.++
T Consensus 263 ~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~--g~---~ga~--~~~gv--~P---D--i~t~gK~l-g-gG~Pigav~ 326 (474)
T PLN02482 263 VPKKEFLEGLREITKENGALLVFDEVMTGFRI--AY---GGAQ--EYFGI--TP---D--LTTLGKVI-G-GGLPVGAYG 326 (474)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCeec--Cc---chHh--HHhCC--CC---C--EEEecchh-h-CCCceEEEE
Confidence 54 67799999999999999999999976532 11 1111 12221 12 1 25789999 5 689999997
Q ss_pred ecCCChhHHHHHHhh----hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---C
Q 041151 288 MTNIPPKTVDEIYKI----ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSC---R 360 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---p 360 (463)
+++++.+.+... ...+++.+++...++.+.|+ .+++ .+..+++.++-++|.+.|+++ -
T Consensus 327 ---g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~-----------~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~ 391 (474)
T PLN02482 327 ---GRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK-----------RLQQ-PGTYEYLDKITKKLIQGILEAGKKA 391 (474)
T ss_pred ---EcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHH-----------HHhc-cCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 688998888532 12355567777777766653 2221 235566666667777777653 1
Q ss_pred Ccccc-cCCceeEEeeeccCCh-hhHHHHhhcCCCC--hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcH
Q 041151 361 NVVCN-FTEGAMYSFPQIRLPP-KAIEAAKRAGKVP--DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDM 436 (463)
Q Consensus 361 g~~~~-~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i 436 (463)
|+.+. ..-++++...-..-|. .+.+. ...+ ....+...+.++||++.|.. +.. + -+++..+++||
T Consensus 392 g~~~~~~~v~g~~gi~f~~~~~~~~~~~----~~~d~~~~~~~~~~l~~~Gv~~~~~~-~~~----~--~psl~ht~~dI 460 (474)
T PLN02482 392 GHEMCGGYISGMFGFFFTEGPVYNFADA----KKSDTAKFARFHRGMLEEGVYLAPSQ-FEA----G--FTSLAHTEEDI 460 (474)
T ss_pred CCCEEEcccceEEEEEEecCCccChhhh----ccCCHHHHHHHHHHHHHCCeEEeccC-CCC----C--cCCCCCCHHHH
Confidence 23332 2223333211011110 00000 0001 11223455667899998732 111 1 15666899999
Q ss_pred HHHHHHHHHHHHH
Q 041151 437 PAIMESFKKFNDE 449 (463)
Q Consensus 437 ~~~~~~l~~~l~~ 449 (463)
+++++++.+++++
T Consensus 461 d~~l~al~~~l~~ 473 (474)
T PLN02482 461 DFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 323
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.46 E-value=2.6e-11 Score=123.09 Aligned_cols=308 Identities=12% Similarity=0.069 Sum_probs=173.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCC-----CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDS-----RGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 155 (463)
+|+.+++++.+.+..+. ...|... .-+..+++.++++++ .+..+++++++.++..++.++ .+|
T Consensus 93 l~~~vieAv~~~~~~y~--~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~l--~~G 160 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYS--NLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNTL--AKG 160 (454)
T ss_pred CCHHHHHHHHHHHhccc--chhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHh--CCc
Confidence 38999999998887642 1123211 113578888888874 344556777788898888665 699
Q ss_pred CEEEEc------c-------------Ccee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC--cc--CCC
Q 041151 156 DGVVLL------F-------------HTTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT--GQ--CLS 210 (463)
Q Consensus 156 d~Vlvp------~-------------g~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt--G~--~~s 210 (463)
|+|+++ + |+++ .......++ +.+++++++ ++++|++.+++|++ |. ..+
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l-~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d 233 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHL-KDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS 233 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCH-HHHHHhcCc------CCEEEEEEccCcccccCCCCCCC
Confidence 999997 2 2232 111223467 999999987 89999999999995 53 444
Q ss_pred HHHHHHHHHHhhhCCeEEEecccccccc----cCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEE
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQNI----YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYF 286 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~ 286 (463)
+++|+++|+++|+++++|.+...+. |+-... +.+... .+.+-.+++.|.+|++ |.| ..|++
T Consensus 234 ---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~-p~~~~~--------~~~GaDiv~fSg~K~L-gGp--~~G~i 298 (454)
T TIGR00474 234 ---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDE-PTVQEV--------IAAGVDLVTFSGDKLL-GGP--QAGII 298 (454)
T ss_pred ---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCC-cccccH--------hHcCCCEEEecCcccc-CCC--eEEEE
Confidence 8888999999999999998643321 100010 111111 1112238999999998 434 48998
Q ss_pred EecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHhhcC--CC
Q 041151 287 EMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYE--QFVRESKGILESLRRRARMMTDGFNSC--RN 361 (463)
Q Consensus 287 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~--pg 361 (463)
+ +++++++.+++..- ....+......++...+..-......+. ..++.+....++..++...+.+.|+.. +|
T Consensus 299 ~---g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~ 375 (454)
T TIGR00474 299 V---GKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPG 375 (454)
T ss_pred E---ECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCC
Confidence 8 57888877654321 1222233222222222210000001111 112223334445666777888888764 44
Q ss_pred c--ccccCC----ceeE-------EeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEE
Q 041151 362 V--VCNFTE----GAMY-------SFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTT 428 (463)
Q Consensus 362 ~--~~~~~~----g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis 428 (463)
+ .+.+.. ||-+ .-+.++.. + -+...+.+.|++....|..- . .++.+.+.
T Consensus 376 ~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~-~-----------~~~~~l~~~lr~~~~~ii~r----~--~~~~~~ld 437 (454)
T TIGR00474 376 FELEIVPGLSQVGGGSLPDERLPSYAVTLTPD-G-----------LSAEKLEARLRELPPPIIGR----I--EDDRFLLD 437 (454)
T ss_pred ceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-C-----------CCHHHHHHHHhcCCCCEEEE----E--ECCEEEEE
Confidence 3 223222 2211 11112211 1 13344556677666433321 1 23367888
Q ss_pred ec-CCcCcHHHHHHHH
Q 041151 429 IL-PAEEDMPAIMESF 443 (463)
Q Consensus 429 ~~-~~~e~i~~~~~~l 443 (463)
+. ..++|++.++++|
T Consensus 438 ~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 438 LRTLLEDEEELLIEAL 453 (454)
T ss_pred eCcCCHHHHHHHHHHh
Confidence 88 6778888887766
No 324
>PRK12403 putative aminotransferase; Provisional
Probab=99.46 E-value=3.2e-11 Score=123.62 Aligned_cols=319 Identities=13% Similarity=0.067 Sum_probs=177.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+..... .+ ..+..+...++++.+.+..+ -.-+.+++++++++|+..+++.... +++
T Consensus 72 hp~v~~A~~~q~~~~~~~~-~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~ 146 (460)
T PRK12403 72 RKDLAAAAARQMEQLPYYN-MF--FHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQ 146 (460)
T ss_pred CHHHHHHHHHHHHhCCCee-cc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCC
Confidence 6889999998888631110 11 11223445555555544321 1236899999999999999997731 233
Q ss_pred CEEEEc-----cCcee------------------------c-CCC----cccC--------hHHHHHHHHHHHHhcCCce
Q 041151 156 DGVVLL-----FHTTW------------------------K-RQQ----IGVL--------IINDLQQSVAQARSKGITV 193 (463)
Q Consensus 156 d~Vlvp-----~g~~~------------------------~-~~~----~~~d--------~~~~l~~~l~~~~~~~~~~ 193 (463)
..+++. +|... + ... +... . +.+++.+.+.. ..++
T Consensus 147 r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~le~~~~~~~--~~~i 223 (460)
T PRK12403 147 KKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAA-LQLEEKILELG--AENV 223 (460)
T ss_pred CcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHH-HHHHHHHHHhC--CCce
Confidence 445443 22211 0 000 0111 2 34555543211 1246
Q ss_pred eEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+|++.--..-.|.+ .+.+-+++|.++|++||+++|.||++..+.-. + ..... ..+|+ .. .|+ +++
T Consensus 224 aavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt-G----~~~a~-e~~gv--~P---Div--~~g 290 (460)
T PRK12403 224 AGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRT-G----EWFAH-EHFGF--EP---DTL--SIA 290 (460)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-c----hhhhh-hhcCC--CC---CeE--EEc
Confidence 666665334434654 46677999999999999999999999764211 1 11111 12222 22 133 489
Q ss_pred cccCCCCCc-eeEEEEecCCChhHHHHHHhh-----hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 041151 273 KGYWGECGQ-RGGYFEMTNIPPKTVDEIYKI-----ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLR 346 (463)
Q Consensus 273 K~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (463)
|.+ + .|. .+|.++ +++++.+.+... ...+++.+++...++.+.|+ .+++ +.+.++.+
T Consensus 291 K~l-g-gG~~Piga~v---~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~-----------~i~~-~~l~~~~~ 353 (460)
T PRK12403 291 KGL-T-SGYVPMGGLV---LSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK-----------ALRD-EGVVTRVK 353 (460)
T ss_pred ccc-c-ccccceEEEE---ECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHH
Confidence 999 4 574 888888 478888877531 22356677888888877763 2221 12344453
Q ss_pred -HHHHHHHHHhhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 347 -RRARMMTDGFNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 347 -~~~~~l~~~L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
++-+++.+.|++ .|-+.-+...| .+.-+.+..+... ...... ....+...+.++||.+.+..
T Consensus 354 ~~~g~~l~~~L~~l~~~~~~i~~vrG~G-l~~gie~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gll~~~~~---- 423 (460)
T PRK12403 354 DDTGPYLQRCLREVFGDHPLVGEVQGAG-LVAALQFAEDKAT-----RKRFANENDLAWRCRTIGFEEGVIIRSTL---- 423 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEeecc-eEEEEEEccCccc-----cccccchhHHHHHHHHHHHhCCEEEEecC----
Confidence 455555555543 33222233334 3333333211100 000000 01123344567899997521
Q ss_pred CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 419 ~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+.+|++.. .+++++++++++|.++++++.+
T Consensus 424 ----~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 424 ----GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred ----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 14899988 5999999999999999988753
No 325
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=3.8e-12 Score=120.66 Aligned_cols=325 Identities=13% Similarity=0.122 Sum_probs=199.3
Q ss_pred cHHHHHHHHHHhhhcC----CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCE
Q 041151 82 PADAIARAKHYLSLTS----GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 157 (463)
.+.+.+.+...++.++ +...-|+...-+..|.+.||+|++ ..+.|+.+.| -.++..++.+++ +.||.
T Consensus 110 ~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivYs~g-F~ti~S~ipafs-KrGDI 180 (467)
T KOG1358|consen 110 NEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVYSYG-FSTIESAIPAFS-KRGDI 180 (467)
T ss_pred cHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeeeccc-cchhhhcchhhh-ccCcE
Confidence 7889999999888874 245678888888899999999996 4456766666 668999999998 89999
Q ss_pred EEEc--------cCcee---cCCCcccChHHHHHHHHHHHH---hcCC---c-eeEEEEECCCCCCccCCCHHHHHHHHH
Q 041151 158 VVLL--------FHTTW---KRQQIGVLIINDLQQSVAQAR---SKGI---T-VRAMVIINPGNPTGQCLSEANLREILR 219 (463)
Q Consensus 158 Vlvp--------~g~~~---~~~~~~~d~~~~l~~~l~~~~---~~~~---~-~~~i~l~~p~NPtG~~~s~~~l~~l~~ 219 (463)
|.+. .|... .-.-|..+-|+.|+..+.+.. ...+ . -+.|++..-.-+||.+.+ +.+|++
T Consensus 181 i~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~ 257 (467)
T KOG1358|consen 181 IFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVK 257 (467)
T ss_pred EEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHH
Confidence 9987 44444 222344433388877765421 1111 2 345555566677999988 677777
Q ss_pred HhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 220 FCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 220 ~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
+..+|...||.||.|+....+ ... ..+..+++.| ..+..++++|++-+++ .. .|+.+ | ..++-..
T Consensus 258 lk~Kyk~RvildEs~SfG~lg-~~G----rGvteH~~v~--~~~iDiv~~sm~~ala-s~---GgFc~---G-~~~i~~h 322 (467)
T KOG1358|consen 258 LKNKYKFRVILDESLSFGVLG-KTG----RGVTEHFGVP--ITDIDIVTASMETALA-SG---GGFCA---G-KSFIADH 322 (467)
T ss_pred HHhhheEEEEEeccccccccc-ccC----ccccccCCCC--ccceeeeeeccccccc-cc---Cceee---c-ceeeEee
Confidence 888999999999999976652 211 1222333332 2235688899998883 22 36665 4 3333333
Q ss_pred Hhhhh--hcccCChHHHH--HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEee
Q 041151 300 YKIAS--IALSPNVPAQI--FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFP 375 (463)
Q Consensus 300 ~~~~~--~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~ 375 (463)
+++.+ ..++.+.+... ++..++ ....+..++.+.+++....+...|+...++.+....-+....+
T Consensus 323 QrLSg~~Y~fSAslPp~la~aa~~ai-----------~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl 391 (467)
T KOG1358|consen 323 QRLSGSGYCFSASLPPYLAGAAIKAI-----------LIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHL 391 (467)
T ss_pred eeccccceeeeccCchhhhhhHHHHH-----------HHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeee
Confidence 33332 12233333222 222222 1334444466667777777888887765677765555555555
Q ss_pred eccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCC---CCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 376 QIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGF---GQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f---~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
.++-+.+-.+..... -.+.+...+.+ |+.+.-...- ..-+-..-+||++. .++||++++...|+++...
T Consensus 392 ~l~~~~~s~e~e~~l----L~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 392 QLERSYGSREKEEKL----LEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred eecccccchHHHHHH----HHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 555332211100000 13444555655 7777543211 11112225999999 8999999999999987654
No 326
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=1.1e-11 Score=127.09 Aligned_cols=315 Identities=11% Similarity=0.067 Sum_probs=182.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+.... ..+. . ..+.+.++|+.+.+... -.-+.+++++++++|+..+++.... .+|
T Consensus 74 ~p~v~~Ai~~ql~~l~~~-~~~~--~-~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tg 147 (460)
T PRK06916 74 VPELDEAIREQLNKIAHS-TLLG--L-ANVPSILLAEKLIEVVP--EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPK 147 (460)
T ss_pred CHHHHHHHHHHHHhCCCc-cccc--c-CCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 788999998888863111 1110 1 12344556666554321 1225899999999999999986531 133
Q ss_pred -CEEEEc----cCcee-------------------------c-CC----Ccc--------cChHHHHHHHHHHHHhcCCc
Q 041151 156 -DGVVLL----FHTTW-------------------------K-RQ----QIG--------VLIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~-~~----~~~--------~d~~~~l~~~l~~~~~~~~~ 192 (463)
.+|+.- +|... + .+ .++ .++ +.+++.++.. +.+
T Consensus 148 r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~---~~~ 223 (460)
T PRK06916 148 KQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHL-EELEELLKEK---HEE 223 (460)
T ss_pred CcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHH-HHHHHHHHhC---CCc
Confidence 445543 23111 0 00 001 123 5566666521 226
Q ss_pred eeEEEEEC-CCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 193 VRAMVIIN-PGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 193 ~~~i~l~~-p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
+.+|++.- ...-.|.+ .+.+-+++|.++|++||+++|.||++..+.-. + ..... ..+++ .. .| .+
T Consensus 224 iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt-G----~~~a~-~~~gv--~P---Di--v~ 290 (460)
T PRK06916 224 IAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT-G----KMFAC-EHENV--TP---DI--MT 290 (460)
T ss_pred EEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC-c----hhhHH-HhcCC--CC---Ce--ee
Confidence 77877764 34445655 58888999999999999999999999764211 1 11111 12221 12 12 36
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHh-------h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYK-------I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
++|.+ + .| +.+|.++ +++++.+.+.. . ...+++.+++...++.+.|+ .+++ +.+
T Consensus 291 ~gK~l-~-gG~~Pi~av~---~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~-----------~l~~-~~l 353 (460)
T PRK06916 291 AGKGL-T-GGYLPIAITV---TTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE-----------LYEK-TNL 353 (460)
T ss_pred eehhh-h-cCccccceee---ecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH-----------HHHh-ccH
Confidence 79999 4 57 5899998 58888877742 1 12356678888777777763 2221 235
Q ss_pred HHHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCC
Q 041151 342 LESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSG 415 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~ 415 (463)
.++.+++-+++.+.|+++ |.+.-+...|-+ .-+.+..+... ...... ....+...+.++||++.+..
T Consensus 354 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm-~giel~~~~~~-----~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g- 426 (460)
T PRK06916 354 IEQVARKTEYVATQLEDLFALKHVGDIRQLGLM-VGIELVKNKET-----KEPFEWTERVGVQVCKRSRELGMLTRPLG- 426 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeecCCce-eeEEeeccccc-----ccCCCchhhHHHHHHHHHHHCCeEEEecC-
Confidence 566666667777777654 222223334433 22222211100 000000 11234455778999998731
Q ss_pred CCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 416 FGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 416 f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+.+|+..+ .+++|+++++++|.++++++
T Consensus 427 -------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 427 -------NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred -------CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 25888866 89999999999999999764
No 327
>PRK07046 aminotransferase; Validated
Probab=99.44 E-value=4.7e-11 Score=122.02 Aligned_cols=308 Identities=15% Similarity=0.075 Sum_probs=178.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+++... ....+ ..+...++|+.+.+.. ..+.+.+++++++|...+++.... ...++|+.
T Consensus 93 ~p~i~~Av~~q~~~~--~~~~~-----~~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~ 161 (453)
T PRK07046 93 PAPVARALAEQARRG--LTTML-----PSEDAAWVGEELARRF----GLPYWQVATTATDANRFVLRWARAVTGRPKILV 161 (453)
T ss_pred CHHHHHHHHHHHHhC--CCCCC-----CCHHHHHHHHHHHHHh----CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 688999998888762 11111 1245555666665442 357999999999999999986531 12345554
Q ss_pred c----cCce---e---------cC----------------CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 161 L----FHTT---W---------KR----------------QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 161 p----~g~~---~---------~~----------------~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
- +|.. . .. ..+ -|+ +.+++.+.. .++.+|++.--..-.|.+
T Consensus 162 ~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~-~~l~~~l~~-----~~vAavi~EPi~g~~G~~ 234 (453)
T PRK07046 162 FNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDL-AALEAALAD-----GDVAAVLAEPAMTNIGMV 234 (453)
T ss_pred ECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCH-HHHHHHhCC-----CCeEEEEECCCCCCCCCc
Confidence 3 3321 0 00 001 167 888888742 167777666222223544
Q ss_pred -CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 209 -LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 209 -~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
.+.+-++++.++|++||+++|.||+.. +..+.+. ... .+++ .. .| .+++|.+ | .|+.+|.++
T Consensus 235 ~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg----~~~---~~gv--~P---Di--~t~gK~l-g-gG~Pi~av~ 297 (453)
T PRK07046 235 LPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG----YTR---AHGL--EP---DF--LVVGKPI-A-GGVPCAVYG 297 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc----hhH---HhCC--Cc---cc--eeehhhh-c-CCCcceeee
Confidence 455679999999999999999999987 4331111 111 1111 12 12 3589999 4 589999888
Q ss_pred ecCCChhHHHHHHhh----------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 288 MTNIPPKTVDEIYKI----------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~----------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
+++++.+.+... ...+++.+++...++.+.|+ .++ .++..++..+.-+.|.+.|+
T Consensus 298 ---g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~-----------~l~-~~~~~~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 298 ---FSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA-----------EVM-TEAAYAHMLALAARLAAGLR 362 (453)
T ss_pred ---ehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH-----------HHh-cccHHHHHHHHHHHHHHHHH
Confidence 688888888631 12356778888877777764 111 11234444455555555554
Q ss_pred c----CCCccc-ccCCceeEEeeecc--CChhhHHHHhhcCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 358 S----CRNVVC-NFTEGAMYSFPQIR--LPPKAIEAAKRAGKVP-DVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 358 ~----~pg~~~-~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
+ . ++.+ +...|.++.+ .+. .+....+... ..+. -...+...+.++||++.|. + ..++++.
T Consensus 363 ~l~~~~-~~~~~v~g~G~~~~i-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gv~~~~~---~-----~~~~~~p 430 (453)
T PRK07046 363 AVIARH-GLPWHVTRVGARVEF-QFAPTPPRNGAEAAA--ALDPELEAALHLYLLNRGVLITPF---H-----NMMLVCP 430 (453)
T ss_pred HHHHhC-CCCeEEEEeCcEEEE-EEeCCCCCCHHHHhc--ccCHHHHHHHHHHHHHCCCEEecc---c-----CcEEEeC
Confidence 3 3 3222 2223433221 121 1111100000 0000 1122234455689999762 1 1478888
Q ss_pred cCCcCcHHHHHHHHHHHHHHHH
Q 041151 430 LPAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 430 ~~~~e~i~~~~~~l~~~l~~~~ 451 (463)
..+++||+++++++.++++++.
T Consensus 431 ~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 431 ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999987653
No 328
>PRK07483 hypothetical protein; Provisional
Probab=99.44 E-value=5.6e-11 Score=121.24 Aligned_cols=326 Identities=15% Similarity=0.078 Sum_probs=183.3
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+.+.+.. .+....-..+....+++.+.+... -..+.+++++++++++..+++.... ++|
T Consensus 48 ~p~v~~av~~ql~~~~----~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~ 121 (443)
T PRK07483 48 HPRVIAAIHAQIDRLA----YAHTSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQ 121 (443)
T ss_pred CHHHHHHHHHHHHhcc----CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6788999988887621 011110113455566666654311 1236899999999999999986531 133
Q ss_pred -CEEEEc----cCcee-------------------c-------CCCccc-----C--------hHHHHHHHHHHHHhcCC
Q 041151 156 -DGVVLL----FHTTW-------------------K-------RQQIGV-----L--------IINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------~-------~~~~~~-----d--------~~~~l~~~l~~~~~~~~ 191 (463)
.+|+.- +|... + ...+.. + . +.+++.+... ...
T Consensus 122 r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~--~~~ 198 (443)
T PRK07483 122 RRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA-DELEAKILEL--GPD 198 (443)
T ss_pred CcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH-HHHHHHHHhc--CCC
Confidence 345553 22211 0 000000 0 2 3455544321 012
Q ss_pred ceeEEEEECCC-CCCc-cCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEe
Q 041151 192 TVRAMVIINPG-NPTG-QCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFH 269 (463)
Q Consensus 192 ~~~~i~l~~p~-NPtG-~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (463)
++.+|++.--. +-.| ...+.+-++.|.++|++||+++|.||+...+.- ...+... ..+++ ..+ +-
T Consensus 199 ~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGR-----tG~~~a~-~~~gv--~PD-----iv 265 (443)
T PRK07483 199 TVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR-----TGTLFAC-EEDGV--APD-----LV 265 (443)
T ss_pred ceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCccc-----CcHHHHH-hhcCC--CCC-----ee
Confidence 56777666333 2225 455777899999999999999999999987521 1112211 12221 121 24
Q ss_pred cCCcccCCCCCc-eeEEEEecCCChhHHHHHHhh-----hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHH
Q 041151 270 TVSKGYWGECGQ-RGGYFEMTNIPPKTVDEIYKI-----ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILE 343 (463)
Q Consensus 270 S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (463)
+++|.+ + .|+ .+|.++ .++++.+.+... ...+++.+++...++.+.|+ .+++ +++.+
T Consensus 266 ~~gK~l-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~-----------~i~~-~~l~~ 328 (443)
T PRK07483 266 TIAKGL-G-AGYQPIGAVL---ASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQR-----------VIAE-DGLLA 328 (443)
T ss_pred eehhhh-c-cCccccEEEE---EcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHHH
Confidence 569999 4 585 899998 488888877532 22467788888888887763 2221 23455
Q ss_pred HHHHHHHHHHHHhhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCCC---hHHHHHHHHHhcCeEeeCCCCC
Q 041151 344 SLRRRARMMTDGFNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVP---DVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 344 ~~~~~~~~l~~~L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f 416 (463)
+.++.-++|.+.|++ .|.+.-+...|- +.-+.+..+... ....+. ....+...+.++||++.+....
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Gl-m~gie~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~ 402 (443)
T PRK07483 329 NVRARGEQLRARLRERLGQHPHVGDIRGRGL-FVGVELVADRAT-----KAPFDPALKLHARIKREAMARGLMVYPMGGT 402 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeEeeccc-EEEEEEeecccc-----cCCCCchhhHHHHHHHHHHHCCcEEEecCcc
Confidence 556666666666654 232222233333 333223111000 000000 1223445567789999874211
Q ss_pred CCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 417 GQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 417 ~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
......+.+|+... .+++++++++++|.+++.+...
T Consensus 403 ~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 403 IDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00011247999888 7999999999999999987654
No 329
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=2.5e-11 Score=124.43 Aligned_cols=315 Identities=14% Similarity=0.064 Sum_probs=182.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----C-CC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----G-EG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~-~g 155 (463)
++.+.+++.+++.+.. +.... .-..+.+..+++.+.+... -..+.+++++++++|+..+++.... . +|
T Consensus 65 ~p~v~~Ai~~ql~~l~---~~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~ 138 (466)
T PRK07030 65 NPRINQRIKDQVDQLE---HVILA-GFSHEPVIELSERLVKITP--PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPR 138 (466)
T ss_pred CHHHHHHHHHHHHhcC---Ccccc-ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 6788899988887621 11110 1113455566666654311 1235899999999999999987520 1 23
Q ss_pred -CEEEEc----cCcee-------------------------c-CCC----ccc--------ChHHHHHHHHHHHHhcCCc
Q 041151 156 -DGVVLL----FHTTW-------------------------K-RQQ----IGV--------LIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~-~~~----~~~--------d~~~~l~~~l~~~~~~~~~ 192 (463)
.+|+.- +|... + ... ++. ++ +.+++.+... +.+
T Consensus 139 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l-~~le~~~~~~---~~~ 214 (466)
T PRK07030 139 KKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMF-AHMEQTLAEH---HDE 214 (466)
T ss_pred CcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHH-HHHHHHHHhC---CCc
Confidence 345443 33221 0 000 000 23 5566666531 225
Q ss_pred eeEEEEEC-CCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 193 VRAMVIIN-PGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 193 ~~~i~l~~-p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
+.+|++.- ...-.|. ..+.+-+++|.++|++||+++|.||++..+.-.+ .+... ..+|+ ..+ | -+
T Consensus 215 iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG-----~~~a~-~~~gv--~PD---i--v~ 281 (466)
T PRK07030 215 IAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG-----TMFAC-EQAGI--RPD---F--LC 281 (466)
T ss_pred eEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc-----cchHH-HhcCC--CCC---E--Ee
Confidence 77776664 2333465 5566789999999999999999999998753211 11111 11211 221 2 34
Q ss_pred CCcccCCCCC-ceeEEEEecCCChhHHHHHHh--------hhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 271 VSKGYWGECG-QRGGYFEMTNIPPKTVDEIYK--------IASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 271 ~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
++|.+ + .| +.+|.++ +++++.+.+.. ....+++.+++...++.+.|+ .+++ +++
T Consensus 282 ~gKgl-~-gG~~Pi~av~---~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~-----------~i~~-~~l 344 (466)
T PRK07030 282 LSKAL-T-GGYLPLAAVL---TTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD-----------IFEQ-DNV 344 (466)
T ss_pred eehhc-c-CCcccceEEE---ecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH-----------HHHh-cCH
Confidence 69999 4 68 4899998 58888887742 122467778888888887764 2221 234
Q ss_pred HHHHHHHHHHHHHHhhcC---CCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCCCC
Q 041151 342 LESLRRRARMMTDGFNSC---RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPGSG 415 (463)
Q Consensus 342 ~~~~~~~~~~l~~~L~~~---pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg~~ 415 (463)
.++.++.-++|.+.|+++ |.+.-+...| +++-+.+...... ......+ ...+...+.++||++.+.
T Consensus 345 ~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 416 (466)
T PRK07030 345 IENNRALARRMAEATAHLADHPHVAEVRQTG-MILAIEMVQDKAS-----KTPYPWQERRGLKVYQHALERGALLRPL-- 416 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeEece-eEEEEEeccCccc-----cccCcchhHHHHHHHHHHHHCCeEEEec--
Confidence 555666666666666553 3332233334 3333333211100 0000001 122345567889999762
Q ss_pred CCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 416 FGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 416 f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+ ..+|+..+ .+++|+++++++|.++++++
T Consensus 417 -g-----~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 -G-----SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -C-----CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 25898866 89999999999999999887
No 330
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.43 E-value=6.8e-11 Score=121.20 Aligned_cols=328 Identities=13% Similarity=0.017 Sum_probs=177.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEc-CCcHHHHHHHHHHHhcCCC-CEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP-ELIFLT-DGASKGVMQTLNCVIRGEG-DGV 158 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t-~G~~~al~~~~~~l~~~~g-d~V 158 (463)
++.+.+++.+++.+. . .+....-..+.+.++++.+.+........ +.++++ +++++|+..+++....-.| .+|
T Consensus 81 ~p~v~~Ai~~ql~~~--~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~i 156 (464)
T PRK06938 81 HPVVIEAIQQVLADE--L--PLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTV 156 (464)
T ss_pred CHHHHHHHHHHHHhh--h--cccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeE
Confidence 678999998887641 1 11111111244445555554321111111 256564 7889999999996531233 445
Q ss_pred EEc----cCcee-------------------------c-CCCc----c--------cChHHHHHHHHHHHHhcCCceeEE
Q 041151 159 VLL----FHTTW-------------------------K-RQQI----G--------VLIINDLQQSVAQARSKGITVRAM 196 (463)
Q Consensus 159 lvp----~g~~~-------------------------~-~~~~----~--------~d~~~~l~~~l~~~~~~~~~~~~i 196 (463)
+.- +|... + ...+ + .++ +.+++.+.+......++.+|
T Consensus 157 i~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~~~~~~iAAv 235 (464)
T PRK06938 157 LSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL-HYLENLLDDPESGVVLPAAV 235 (464)
T ss_pred EEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHH-HHHHHHHHhhccCCCceEEE
Confidence 543 22111 0 0000 0 124 66777775421111246777
Q ss_pred EEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCccc
Q 041151 197 VIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGY 275 (463)
Q Consensus 197 ~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 275 (463)
++.--..--|.+ .+.+-++++.++|++||+++|.||+...+.- ...+... ..+|+ ..+ | -+++|.+
T Consensus 236 I~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGR-----tG~~~a~-e~~gv--~PD---i--v~~gKgl 302 (464)
T PRK06938 236 ILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGR-----TGKMFAF-EHAGI--IPD---V--VVLSKAI 302 (464)
T ss_pred EEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----CcHHHHH-HhcCC--CCC---E--EEeeccc
Confidence 665322223654 5688899999999999999999999987521 1122221 22222 221 2 4469999
Q ss_pred CCCCCceeEEEEecCCChhHHHHHHhh-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 276 WGECGQRGGYFEMTNIPPKTVDEIYKI-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTD 354 (463)
Q Consensus 276 ~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (463)
| .|+.+|.++. .+++ +.+... ...+++.++++..++.+.|+ .++ .+++.++.++.-++|.+
T Consensus 303 -g-gG~PlsAv~~---~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~-----------~l~-~~~l~~~~~~~G~~l~~ 364 (464)
T PRK06938 303 -G-GSLPLAVVVY---REWL-DTWQPGAHAGTFRGNQMAMAAGSATLR-----------YIK-EHRLAEHAAAMGERLRE 364 (464)
T ss_pred -c-CCCceEEEee---hhHh-hccCCCCCCCCCCcCHHHHHHHHHHHH-----------HHH-HhHHHHHHHHHHHHHHH
Confidence 5 5899999984 5553 544322 22467788888888887764 222 12344555555556666
Q ss_pred HhhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 355 GFNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV-PDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 355 ~L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
.|+++ |.+.-+...| +++-+.+..+....+........ .-...+...+.++||.+.++..++ +.+|+..
T Consensus 365 ~L~~l~~~~~~i~~VrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~-----~~l~~~P 438 (464)
T PRK06938 365 HLRQLQRDYPQLGDVRGRG-LMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHG-----SVVRFLP 438 (464)
T ss_pred HHHHHHHhCCCeeeeeccc-eEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCC-----CEEEEEC
Confidence 66543 3222233334 33333332111000000000000 012223445667999998753222 3699986
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
+ .+++|++++++++.+++.++-
T Consensus 439 pl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 439 PLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHh
Confidence 6 899999999999999997753
No 331
>PRK15029 arginine decarboxylase; Provisional
Probab=99.42 E-value=3.9e-11 Score=127.44 Aligned_cols=157 Identities=13% Similarity=0.076 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----cC-CCc
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW----KR-QQI 171 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~----~~-~~~ 171 (463)
.+..+..|+.++ .....+++||++.++..++.+++ ++||+|+++ .|+++ +. +.+
T Consensus 208 ~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~-~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~ 279 (755)
T PRK15029 208 GESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRY 279 (755)
T ss_pred HHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 455555566554 23578899999999999999998 999999999 55555 21 222
Q ss_pred ----ccC-----hHHHHHHHHHHHHh----cCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc-c
Q 041151 172 ----GVL-----IINDLQQSVAQARS----KGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ-N 237 (463)
Q Consensus 172 ----~~d-----~~~~l~~~l~~~~~----~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~-~ 237 (463)
+++ . +.++++++.... .+++++++++++|+. -|.+.. +++|+++|+++++.|++||||.. +
T Consensus 280 Gi~~~i~~~~~~~-e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 280 GIIGPIYPQEMQP-ETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred CCccCCCccccCH-HHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECcccccc
Confidence 234 7 899999876421 123556999999988 599977 78888899999999999999964 3
Q ss_pred ccCCCCCccchHHHH--HhcCCCCCCCceEEEEecCCcccCCCCCce-eEEEEe
Q 041151 238 IYQDERPFVSSKKVL--MDMGLPFSKEVQLVSFHTVSKGYWGECGQR-GGYFEM 288 (463)
Q Consensus 238 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R-~G~~~~ 288 (463)
.|.+..+..+..... ... +. .++++.|.+|++. ++. .+++-+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~----Ga--d~~vvqStHKtL~---alTQaS~LHv 399 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHN----GP--TVFATHSTHKLLN---ALSQASYIHV 399 (755)
T ss_pred ccCccccccccccccccccC----CC--ceEEEEchhhccc---chhhhhhhee
Confidence 442211211211000 001 11 2489999999984 455 455554
No 332
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.42 E-value=6.9e-11 Score=120.41 Aligned_cols=303 Identities=12% Similarity=0.112 Sum_probs=171.8
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-CEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-DGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv 160 (463)
++.+.+++.+.+... . .|... ...+-.+++.+.+... ..+.+++++++++|+..+++....-.| ..|+.
T Consensus 66 ~p~v~~Ai~~q~~~~--~--~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~ 135 (431)
T PRK06209 66 YPPVVEAVREALQDG--C--NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSDATSAAVRLARAYTGRDLVAR 135 (431)
T ss_pred CHHHHHHHHHHHHhC--c--CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEE
Confidence 678999998888762 1 22211 2333344555543211 136899999999999999996431123 33332
Q ss_pred c------------cCcee--c---------CCCcc-cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHH
Q 041151 161 L------------FHTTW--K---------RQQIG-VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLRE 216 (463)
Q Consensus 161 p------------~g~~~--~---------~~~~~-~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~ 216 (463)
- .|... . ...+. -|+ +.|++.++.. ..++.+|++ -|. .|...+.+.+++
T Consensus 136 ~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~-~~l~~~l~~~---~~~~aavi~-Epv--~g~~~~~~~l~~ 208 (431)
T PRK06209 136 CADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDI-ASLEALFEDH---PGRIACVIL-EPA--TADEPQDGFLHE 208 (431)
T ss_pred eccCccccccccccccCCCCCCCChhHhccccccCCCCH-HHHHHHHHhC---CCCEEEEEE-ccc--cCCCCCHHHHHH
Confidence 1 11111 0 00111 167 8899888642 114555555 442 344677889999
Q ss_pred HHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHH
Q 041151 217 ILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV 296 (463)
Q Consensus 217 l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 296 (463)
|.++|++||+++|+||++..+.+. . . .....+++ .. -+.+++|.+ | .|+.+|+++ +++++.
T Consensus 209 l~~lc~~~g~lLI~DEv~tG~~~~---~--~--g~~~~~gv--~P-----Di~t~gK~l-g-gG~p~~av~---~~~~i~ 269 (431)
T PRK06209 209 VRRLCHENGALFILDEMITGFRWH---M--R--GAQKLYGI--VP-----DLSCFGKAL-G-NGFAVSALA---GKREYM 269 (431)
T ss_pred HHHHHHHcCCEEEEEcccccCCcC---c--c--hhhHHhCC--Cc-----ceeeehhhh-c-CCcccEEEE---EHHHHH
Confidence 999999999999999999765331 1 1 11111211 11 137789999 5 578899998 478887
Q ss_pred HH--HHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcc
Q 041151 297 DE--IYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNS----CRNVV 363 (463)
Q Consensus 297 ~~--l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~pg~~ 363 (463)
+. +... .+.+++++++...++.+.|+ .+++ +.+.++..++-+++.+.|++ + ++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~-----------~i~~-~~~~~~~~~~g~~l~~~L~~~~~~~-~~~ 336 (431)
T PRK06209 270 ELGGLEHTDRERVFLLSTTHGAETHALAAAIATMA-----------IYRD-EDVIERLHEQGAKLAAGVNEAAAEH-GLQ 336 (431)
T ss_pred hhhcccccCCCCceeeccCCCCCHHHHHHHHHHHH-----------HHhc-cCHHHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 76 3111 12244555666666666653 2221 13455566666666666654 3 222
Q ss_pred c-ccCCceeEEeeeccC-ChhhHHHHhhcCCCCh--HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHH
Q 041151 364 C-NFTEGAMYSFPQIRL-PPKAIEAAKRAGKVPD--VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAI 439 (463)
Q Consensus 364 ~-~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~ 439 (463)
. ....|.+..+.-+.. +.+ .... ...+...+.++||.+. .++|+..+++++|+++
T Consensus 337 ~~vr~~G~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~Gi~~p------------~l~is~~ht~~dId~~ 395 (431)
T PRK06209 337 DHVRVSGRPCCLTYSTLDGNG---------QPSQAFRTLFLQETIRRGVLMP------------SLVVSYAHGDADIERT 395 (431)
T ss_pred eEEEeecceEEEEEecCCccc---------CCcHHHHHHHHHHHHHCCcccc------------cccccccCCHHHHHHH
Confidence 1 122333332211111 100 0001 1123344667899762 1577767899999999
Q ss_pred HHHHHHHHHHHHHHh
Q 041151 440 MESFKKFNDEFMEQY 454 (463)
Q Consensus 440 ~~~l~~~l~~~~~~~ 454 (463)
+++|.++++++.+.+
T Consensus 396 l~~l~~~l~~~~~~~ 410 (431)
T PRK06209 396 IDAVHGALGVYRKAL 410 (431)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999886543
No 333
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.42 E-value=5.1e-11 Score=122.14 Aligned_cols=317 Identities=16% Similarity=0.069 Sum_probs=177.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCC---CCCCcEEEcCCcHHHHHHHHHHHhc------
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYP---SDPELIFLTDGASKGVMQTLNCVIR------ 152 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---~~~~~i~~t~G~~~al~~~~~~l~~------ 152 (463)
++.+.+++.+.+.+.. +...... ..+.+..+++.+.+..... -+.+.+++++++++|+..+++....
T Consensus 82 ~p~i~~Ai~~q~~~l~---~~~~~~~-~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g 157 (472)
T PRK08742 82 EPRIGAAIAAQAGELE---QVMLAGF-THEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRG 157 (472)
T ss_pred CHHHHHHHHHHHHhCC---Ccccccc-CCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcC
Confidence 6788899988876521 1111111 1244566676665432110 0235899999999999999987531
Q ss_pred CCC-CEEEEc----cCcee-----c---------------------CCC----ccc--------ChHHHHHHHHHHHHhc
Q 041151 153 GEG-DGVVLL----FHTTW-----K---------------------RQQ----IGV--------LIINDLQQSVAQARSK 189 (463)
Q Consensus 153 ~~g-d~Vlvp----~g~~~-----~---------------------~~~----~~~--------d~~~~l~~~l~~~~~~ 189 (463)
++| .+|+.- +|... . .+. ++. ++ +.+++.+...
T Consensus 158 ~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~--- 233 (472)
T PRK08742 158 EHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAA-DALQALFEQS--- 233 (472)
T ss_pred CCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHH-HHHHHHHHhC---
Confidence 123 455553 33221 0 000 000 23 5566666421
Q ss_pred CCceeEEEEEC-CCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEE
Q 041151 190 GITVRAMVIIN-PGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVS 267 (463)
Q Consensus 190 ~~~~~~i~l~~-p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 267 (463)
..++.+|++.- ..+-.|. ..+.+-++++.++|++||+++|.||+...+.-. +. +... ..+|+ ..+ |
T Consensus 234 ~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt-G~----~~a~-e~~gv--~PD---i- 301 (472)
T PRK08742 234 PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT-GT----LFAC-EQAGV--MPD---L- 301 (472)
T ss_pred CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC-cc----chHH-HhcCC--CCC---E-
Confidence 22677776664 2444565 557788999999999999999999999875321 11 1111 11211 221 2
Q ss_pred EecCCcccCCCCCc-eeEEEEecCCChhHHHHHHhh-------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHH
Q 041151 268 FHTVSKGYWGECGQ-RGGYFEMTNIPPKTVDEIYKI-------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESK 339 (463)
Q Consensus 268 ~~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (463)
-+++|.+ + .|+ .+|.++ +++++.+.+... ...+++.+++...++.+.|+ .+++ +
T Consensus 302 -v~~gKgl-~-gG~~Plaav~---~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~-----------~i~~-~ 363 (472)
T PRK08742 302 -LCLSKGL-T-GGFLPLSAVL---ATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLD-----------IFAD-D 363 (472)
T ss_pred -EEEcccc-c-CCCCCcceee---ccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHH-----------HHHH-C
Confidence 3469999 4 574 899998 588888877421 22466778888888877764 1211 1
Q ss_pred HHHHHHHHHHHHHHHH---hhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCCh---HHHHHHHHHhcCeEeeCC
Q 041151 340 GILESLRRRARMMTDG---FNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD---VFYCLRLLEATGISTVPG 413 (463)
Q Consensus 340 ~~~~~~~~~~~~l~~~---L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gI~v~pg 413 (463)
++.++.++.-+++.+. +.+.|.+.-+...|-+ .-+.+..+.. +......+ ...+...+.++||++.+.
T Consensus 364 ~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~-~giel~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Gll~~~~ 437 (472)
T PRK08742 364 DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMV-VAFELTRGGN-----KRTPFPPAARVGLHAYRAALARGVVLRPL 437 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceE-EEEEeccCcc-----ccccCCchhHHHHHHHHHHHHCCeEEEec
Confidence 2233333333333333 3334433333444433 3322221110 00000001 122345566789999772
Q ss_pred CCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 414 SGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 414 ~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
+ +.+||... .+++|+++++++|.++++++
T Consensus 438 ---g-----~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 438 ---G-----DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred ---C-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 26999998 79999999999999999875
No 334
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.42 E-value=3.2e-12 Score=126.70 Aligned_cols=230 Identities=16% Similarity=0.203 Sum_probs=136.0
Q ss_pred CCCC-CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----
Q 041151 105 DSRG-IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---- 166 (463)
Q Consensus 105 ~~~g-~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---- 166 (463)
.+.| +.+..+..|+.++ .....+++||++.++..++.+++ +|||.|+++ .|+++
T Consensus 63 ~p~G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~-~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~ 134 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALC-RPGDKVLVDRNCHKSVYNALILSGAIPVYIP 134 (417)
T ss_dssp TTBTHHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHT-TTTCEEEEETT--HHHHHHHHHHTEEEEEEE
T ss_pred CCccHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCeEEEec
Confidence 3444 3566666777765 23478899999999999999998 999999999 45554
Q ss_pred cC----------CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 167 KR----------QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 167 ~~----------~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
+. ....++. +.+++++++..... .+++++|++|+. -|.++. +++|+++|+++++.|++||||..
T Consensus 135 p~~~~~gi~~~i~~~~~~~-~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGa 208 (417)
T PF01276_consen 135 PEDNEYGIIGGISPDEFNE-EDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGA 208 (417)
T ss_dssp EEE-TTS-BEEB-GGGGSH-HHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-T
T ss_pred CCccccCCccCCChhhhhH-HHHHHHHHhCcccc-CceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccc
Confidence 21 1222345 77888887642111 145599999988 599977 88889999999999999999964
Q ss_pred c-ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh-hHHHHHHhhhh--hcccCChH
Q 041151 237 N-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP-KTVDEIYKIAS--IALSPNVP 312 (463)
Q Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~l~~~~~--~~~~~~~~ 312 (463)
. .|. +. +.+... +|-+...+..++++.|.+|++.+++. .+++-+.+ +. --.++++.... .+.+++-+
T Consensus 209 h~~F~-~l-p~~a~~----~gad~~~~~~~~vvqS~HKtL~altQ--ts~lh~~~-~~~v~~~~~~~~l~~~~TTSPSY~ 279 (417)
T PF01276_consen 209 HFGFH-PL-PRSALA----LGADRPNDPGIIVVQSTHKTLPALTQ--TSMLHVKG-DRIVDHERVNEALSMHQTTSPSYP 279 (417)
T ss_dssp TGGCS-GG-GTTCSS----TTSS-CTSBEEEEEEEHHHHSSS-TT---EEEEEET-CCCTTHHHHHHHHHHHS-SS--HH
T ss_pred cccCC-CC-ccchhh----ccCccccccceeeeechhhccccccc--ceEEEecC-CCcccHHHHHHHHHHHcCCChHHH
Confidence 3 341 11 111111 11111345578999999999854443 56666522 22 23466666554 23344444
Q ss_pred HHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHh---hcCCCcccccC
Q 041151 313 AQIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGF---NSCRNVVCNFT 367 (463)
Q Consensus 313 ~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L---~~~pg~~~~~~ 367 (463)
..+.+..+. ... ..+-+++.++..++.+.+++.+ +++.++++..|
T Consensus 280 lmASlD~a~----------~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 280 LMASLDVAR----------AQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHHHHHHH----------HHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred HHHHHHHHH----------HHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 333332221 111 1233456666667777777777 55666665544
No 335
>PRK07481 hypothetical protein; Provisional
Probab=99.41 E-value=1.9e-10 Score=117.74 Aligned_cols=320 Identities=13% Similarity=0.068 Sum_probs=179.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc------CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR------GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g 155 (463)
++.+.+++.+++.+... ...+. .-..+.+..+|+.+.+..+ +-..+.+++++++++|+..+++.... .+|
T Consensus 60 ~p~v~~Ai~~ql~~~~~-~~~~~--~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~ 135 (449)
T PRK07481 60 REEVKEAIVRQLDELEY-YSTFD--GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPE 135 (449)
T ss_pred CHHHHHHHHHHHHhccc-eeccc--ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCC
Confidence 67888999888876210 00110 0123555666666654321 11235899999999999999986531 133
Q ss_pred -CEEEEc----cCcee-------------------------c-CC----Ccc-cChHHHHHHHHHHH----H--hcCCce
Q 041151 156 -DGVVLL----FHTTW-------------------------K-RQ----QIG-VLIINDLQQSVAQA----R--SKGITV 193 (463)
Q Consensus 156 -d~Vlvp----~g~~~-------------------------~-~~----~~~-~d~~~~l~~~l~~~----~--~~~~~~ 193 (463)
.+|+.- +|... + .+ .++ -|. +.+++.+.+. - ....++
T Consensus 136 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~le~~i~~~~~~~i 214 (449)
T PRK07481 136 RTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDP-EELARICARLLEREIAFQGPDTI 214 (449)
T ss_pred CcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCH-HHHHHHHHHHHHHHHHhcCCCcE
Confidence 345443 22111 0 00 011 134 4443322110 0 111257
Q ss_pred eEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+|++.-...-.|.+ .+.+-+++|.++|++||+++|.||++..+.-.+ .+... ..+++ ..+ +-+++
T Consensus 215 AAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG-----~~~a~-~~~gv--~PD-----iv~~g 281 (449)
T PRK07481 215 AAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG-----SWFGS-RGWGV--KPD-----IMCLA 281 (449)
T ss_pred EEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc-----hhhHh-hhcCC--CCC-----EEEEe
Confidence 787777444444654 567779999999999999999999998752211 11111 11211 221 24569
Q ss_pred cccCCCCC-ceeEEEEecCCChhHHHHHHhh--------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHH
Q 041151 273 KGYWGECG-QRGGYFEMTNIPPKTVDEIYKI--------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILE 343 (463)
Q Consensus 273 K~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (463)
|.+ + .| +.+|.++ +++++.+.+... ...+++.+++...++.+.|+ .++ .+++.+
T Consensus 282 Kgl-~-gG~~Pi~av~---~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~-----------~l~-~~~l~~ 344 (449)
T PRK07481 282 KGI-T-SGYVPLGATM---VNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLD-----------IVV-REDLPA 344 (449)
T ss_pred ecc-c-CCCcCceEEE---EcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH-----------HHH-hhhHHH
Confidence 998 4 46 5899998 488888877531 22466778888888777763 222 123455
Q ss_pred HHHHHHHHHHHHhhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCC---ChHHHHHHHHHhcCeEeeCCCCC
Q 041151 344 SLRRRARMMTDGFNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV---PDVFYCLRLLEATGISTVPGSGF 416 (463)
Q Consensus 344 ~~~~~~~~l~~~L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f 416 (463)
+.++.-+.|.+.|+++ |-+.-+...| .++.+.+..+... ....+ .....+...+.++||++.+..
T Consensus 345 ~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G-lm~gi~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-- 416 (449)
T PRK07481 345 NAAKRGAYLLEGLQPLKERFELVGDVRGKG-LMLALDLVADKAT-----REPIDPSKGYANAVADVARENGVLVRPSG-- 416 (449)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEeecc-eEEEEEecccccc-----cCCCCchhHHHHHHHHHHHhCCeEEEecC--
Confidence 5666666666666653 2122223334 3333333211000 00000 012233455677899998731
Q ss_pred CCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 417 GQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 417 ~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
..+||+.. .+++|+++++++|.++++++
T Consensus 417 ------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 417 ------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 14899977 69999999999999998764
No 336
>PLN03032 serine decarboxylase; Provisional
Probab=99.41 E-value=2.8e-10 Score=112.85 Aligned_cols=297 Identities=11% Similarity=0.031 Sum_probs=173.5
Q ss_pred cHHHHHHHHHHhhhcCCC-CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcE--EEcCCcHHHHHHHHHHHhc-CCCCE
Q 041151 82 PADAIARAKHYLSLTSGG-LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELI--FLTDGASKGVMQTLNCVIR-GEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~-~~gd~ 157 (463)
....++++.+.+.+..++ ...+.......++.+.+.+++.+..| .+++++ ++|+|+|+++..++.+... .++..
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~ 113 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGI 113 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcE
Confidence 445677777766542111 11121122346666677777666666 456666 9999999999988776421 24567
Q ss_pred EEEc-------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 158 VVLL-------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 158 Vlvp-------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
|+++ .|..+ ....+.+|+ ++|++++++. ..++.+|+++..+|+||.+-+ +++|+++
T Consensus 114 vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~-~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i 186 (374)
T PLN03032 114 LYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDY-DDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRI 186 (374)
T ss_pred EEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcH-HHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHH
Confidence 7776 33333 455678999 9999999862 114677788889999999966 6777778
Q ss_pred hhhCC-----eEEEecccccccccC--CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC-CCCceeEEEEecCCC
Q 041151 221 CYQEN-----LVLLGDEVYQQNIYQ--DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG-ECGQRGGYFEMTNIP 292 (463)
Q Consensus 221 a~~~~-----~~vi~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~G~R~G~~~~~~~~ 292 (463)
|++++ +|+.+|.+|+.+... ...+...+ ... -.-+..|.+|.. + +.| +|.+++ .
T Consensus 187 ~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-----------~~~-vDSis~s~HK~~-g~P~g--~G~ll~---r 248 (374)
T PLN03032 187 LKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-----------RKP-IGSVSVSGHKFL-GCPMP--CGVALT---R 248 (374)
T ss_pred HHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC-----------CcC-CcEEEECccccc-CCCcC--eEEEEE---E
Confidence 88885 699999999764321 01111111 100 124668899976 5 444 898886 4
Q ss_pred hhHHHHHHhhhh------hcccCChHHHH--HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 041151 293 PKTVDEIYKIAS------IALSPNVPAQI--FMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVC 364 (463)
Q Consensus 293 ~~~~~~l~~~~~------~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~ 364 (463)
.+.++.+..... .+...++.... .+...|+.. -.+-..++.++.-++.+++.+.|++. ++.+
T Consensus 249 ~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~---------G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~ 318 (374)
T PLN03032 249 KKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRK---------GYRGIKRDVQHCMRNAHYLKDRLTEA-GLTC 318 (374)
T ss_pred chhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHh---------CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcE
Confidence 445554432111 12333333222 222222110 11223456666777888899999886 6654
Q ss_pred -ccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHH
Q 041151 365 -NFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIME 441 (463)
Q Consensus 365 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~ 441 (463)
..|.....+| +.|. .+. +. .|..+.+- ..++|+++. .+.+.++++++
T Consensus 319 ~~~p~~~~V~f---~~~~--------------~~~----~~-~~w~l~~~--------~~~~hi~vm~~~~~~~id~fi~ 368 (374)
T PLN03032 319 RLNELSSTVVF---ERPM--------------DEA----FI-KKWQLACE--------GDIAHVVVMPNVTVEKLDEFVE 368 (374)
T ss_pred EECCCceEEEE---cCCC--------------cHh----Hh-heeeeccc--------CCEEEEEECCCCCHHHHHHHHH
Confidence 4565554443 3221 111 22 35555531 126899998 45566777766
Q ss_pred HHHH
Q 041151 442 SFKK 445 (463)
Q Consensus 442 ~l~~ 445 (463)
.|++
T Consensus 369 dl~~ 372 (374)
T PLN03032 369 ELVE 372 (374)
T ss_pred HHhc
Confidence 6653
No 337
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.41 E-value=1.3e-10 Score=105.27 Aligned_cols=284 Identities=15% Similarity=0.206 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee------cCCC
Q 041151 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW------KRQQ 170 (463)
Q Consensus 110 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~------~~~~ 170 (463)
..+.+.+++|++ -|.+-+|+|+.++=+.+..+++ .+||.|+++ +|..+ ....
T Consensus 64 ~~F~~dlaeFlg--------~D~~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 64 KDFLEDLAEFLG--------MDEVRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred HHHHHHHHHHhC--------CceeeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCc
Confidence 466677888874 5788999999999999999997 999999997 67766 2345
Q ss_pred cccChHHHHHHHHHHHHhcC-CceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 171 IGVLIINDLQQSVAQARSKG-ITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~-~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
+.+++ +...+.+.+..+++ ..+.+.++++|..--|.+ .+..+++++|+++++.++..++|..... +.+..
T Consensus 135 y~i~~-e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~Grm-----pvs~k 205 (382)
T COG1103 135 YKITP-EGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTVGRM-----PVSGK 205 (382)
T ss_pred eEecH-HHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceeeccc-----ccccc
Confidence 77899 99999888776654 457777888987777877 4588999999999999999999987443 34544
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh--------cccCChHHHHHHHHhc
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI--------ALSPNVPAQIFMGLMV 321 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~q~~~~~~l 321 (463)
.+ . -.++++|=+|+++ +.-.+|.+.+ +.++.+.+-+.... -++++.-.. ....++
T Consensus 206 e~--------g---~DFiVgSGHKsmA--As~PiGvl~~---~eE~ae~V~r~Sg~~~~~KEvellGCT~rGa-pivTlm 268 (382)
T COG1103 206 EI--------G---ADFIVGSGHKSMA--ASAPIGVLAM---SEEWAEIVLRRSGRAFPKKEVELLGCTVRGA-PIVTLM 268 (382)
T ss_pred cc--------C---CCEEEecCccchh--ccCCeeEEee---hhHHHHHHHhhcccccccceeeeecccccCc-hHHHHH
Confidence 33 2 2368899999994 5667999986 78887776544310 122221111 111122
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc---cCCceeEEeeeccCChh-hHHHHhhcCCCChHH
Q 041151 322 NPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCN---FTEGAMYSFPQIRLPPK-AIEAAKRAGKVPDVF 397 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~---~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 397 (463)
.+ +....+..++.-+ --++.+++.+.|+++.|+.-. +.+..+.. ++.|.- .+. +. .....-
T Consensus 269 AS-------fP~V~eRVkrWde-Ev~kaR~fv~elEkigg~~qlG~rPk~HdLm~---Fetp~f~eIa--kk--~~r~gy 333 (382)
T COG1103 269 AS-------FPHVVERVKRWDE-EVEKARWFVAELEKIGGVKQLGERPKNHDLMK---FETPVFHEIA--KK--HKRKGY 333 (382)
T ss_pred hc-------CHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhHHHhCCCCcccceee---ecCchHHHHH--Hh--CcCCce
Confidence 11 1111221222222 233466788888888555432 22333322 344421 111 00 011234
Q ss_pred HHHHHHHhcCeEe-eCCCCCCCCCCCcEEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 041151 398 YCLRLLEATGIST-VPGSGFGQKEGIFHLRTTIL-PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 398 ~~~~ll~~~gI~v-~pg~~f~~~~~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~ 450 (463)
|+.+.|+++||.- .||. ..++.+|+- .+.|+++..+++++++++++
T Consensus 334 FlY~ELK~RgI~GI~~G~-------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 334 FLYEELKKRGIHGIQPGQ-------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred eeHHHHHhcCccccccCc-------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 5667788888742 2321 247999988 99999999999999988764
No 338
>PRK06149 hypothetical protein; Provisional
Probab=99.40 E-value=2.1e-10 Score=127.68 Aligned_cols=319 Identities=13% Similarity=0.073 Sum_probs=179.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+.+...... ..| . .+...++++.+.+... -..+.+++++++++|+..+++.... .....|+.
T Consensus 601 hp~v~~Ai~~q~~~l~~~-~~~----~-~~~~~elae~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~ 672 (972)
T PRK06149 601 HPRLAAAAARQWSLLNTN-SRF----H-YAAVAEFSERLAALAP--DGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVS 672 (972)
T ss_pred CHHHHHHHHHHHHhcccc-ccc----c-CHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEE
Confidence 788999998887763111 112 1 2344455555543311 1235899999999999999984310 12234444
Q ss_pred c----cCcee---------------------------cCC----Ccc-cC-----hHHHHHHHHHHHHhcCCceeEEEEE
Q 041151 161 L----FHTTW---------------------------KRQ----QIG-VL-----IINDLQQSVAQARSKGITVRAMVII 199 (463)
Q Consensus 161 p----~g~~~---------------------------~~~----~~~-~d-----~~~~l~~~l~~~~~~~~~~~~i~l~ 199 (463)
. +|... ..+ .+. .+ . +.+++.++.....+.++.+|++.
T Consensus 673 ~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~iAavI~E 751 (972)
T PRK06149 673 VLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYV-RDVVAQLEELDASGRGLAGFICE 751 (972)
T ss_pred EeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHH-HHHHHHHHHHhhcCCceEEEEEc
Confidence 3 32111 000 011 01 2 34444444322222356676665
Q ss_pred C-CCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCC
Q 041151 200 N-PGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGE 278 (463)
Q Consensus 200 ~-p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 278 (463)
- +++--....+.+-+++|.++|++||+++|.||++..+.-.+ . .+... ..+|+ .. .| -+++|.+ |
T Consensus 752 pv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG-~---~~~a~-e~~gv--~P---Di--vt~gK~l-g- 817 (972)
T PRK06149 752 PVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG-H---YFWGF-EQQGV--VP---DI--ITMAKGM-G- 817 (972)
T ss_pred ccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC-c---cchhh-hhcCC--CC---CE--EEecccc-c-
Confidence 3 34433355677789999999999999999999996642211 1 11111 22221 11 13 3789999 5
Q ss_pred CCceeEEEEecCCChhHHHHHHhh--hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041151 279 CGQRGGYFEMTNIPPKTVDEIYKI--ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 279 ~G~R~G~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 356 (463)
.|+.+|.++ +++++.+.+... ...+++.++++..++.+.|+ .++ .+++.+..++.-++|.+.|
T Consensus 818 ~G~Pl~av~---~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~-----------~i~-~e~l~~~~~~~G~~l~~~L 882 (972)
T PRK06149 818 NGHPLGAVI---TRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLD-----------VLR-EEKLQENARRVGDHLKARL 882 (972)
T ss_pred CCeeeEEEE---EcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHH-----------HHH-hcCHHHHHHHHHHHHHHHH
Confidence 689999999 488888877641 11245678888888877763 222 1234555555556666666
Q ss_pred hcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 357 NSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 357 ~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
+++ |-+..+...|-+ +-+.+.-... +..........+...+.++||++.+... ..+.+||...
T Consensus 883 ~~l~~~~~~i~~vrG~Gl~-~gvel~~~~~-----~~~~~~~~~~~i~~~l~~~Gvl~~~~g~-----~~~vl~~~Ppl~ 951 (972)
T PRK06149 883 EALADRHPLIGAVHGMGLY-LGVELVRDRQ-----TLEPATEETAAICDRLLELGVIMQPTGD-----HLNILKIKPPLC 951 (972)
T ss_pred HHHHHhCCCeEEEeecceE-EEEEEecCcc-----cCCCChHHHHHHHHHHHhCCeEEeecCC-----CCCEEEEECCCc
Confidence 553 323333334433 3322210000 0000000122334556678999987421 2247999888
Q ss_pred CCcCcHHHHHHHHHHHHHH
Q 041151 431 PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 431 ~~~e~i~~~~~~l~~~l~~ 449 (463)
.+++++++++++|.+++.+
T Consensus 952 it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 952 LDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999864
No 339
>PLN02590 probable tyrosine decarboxylase
Probab=99.39 E-value=5e-10 Score=115.66 Aligned_cols=313 Identities=11% Similarity=0.044 Sum_probs=183.0
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCC-----CCcEEEcCCcHHHHHHHHHHHhcC-----------CCCEEEEc--
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSD-----PELIFLTDGASKGVMQTLNCVIRG-----------EGDGVVLL-- 161 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~~-----------~gd~Vlvp-- 161 (463)
...|....+..++.+.+-+|+.+..|.+-. ...=++++|+++++..++.+-- + |.-.|++.
T Consensus 159 ~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR-~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 159 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAAR-DRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHH-HHHHhhhcccCCCCEEEEecCC
Confidence 344444456689999999999999887632 1334567888888877665531 1 11133333
Q ss_pred -----------cCc-----ee-cC---CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHh
Q 041151 162 -----------FHT-----TW-KR---QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFC 221 (463)
Q Consensus 162 -----------~g~-----~~-~~---~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a 221 (463)
.|. +. +. ..+.+|+ +.|+++|.+..++|..+-+|+.+...-.||.+ +.+++|+++|
T Consensus 238 aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~-~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~i~ 313 (539)
T PLN02590 238 THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPP-ESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGNIA 313 (539)
T ss_pred chHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCH-HHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHHHH
Confidence 333 22 22 3578999 99999998866666556666667788889998 4488899999
Q ss_pred hhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCCh-hHHHHHH
Q 041151 222 YQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP-KTVDEIY 300 (463)
Q Consensus 222 ~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~l~ 300 (463)
++|++|+.+|.+|+.+..- .+....+..++ ..- . =+...++|+++ ...-+|.+.+ .++ .+.+.+.
T Consensus 314 ~~~g~WlHVDaA~GG~al~----~~~~r~~~~Gi----e~A-D-Sit~D~HK~l~--~p~~cg~llv--r~~~~l~~a~~ 379 (539)
T PLN02590 314 KKYGIWLHVDAAYAGNACI----CPEYRKFIDGI----ENA-D-SFNMNAHKWLF--ANQTCSPLWV--KDRYSLIDALK 379 (539)
T ss_pred HHhCCeEEEecchhhhhhc----ChhhHHHhcCC----ccC-C-EEEECchhhcC--cCcCEEEEEe--cCHHHHHHHhh
Confidence 9999999999999876431 11222222222 111 1 25578999874 5667898887 343 3344332
Q ss_pred hhhh-----------------hcccCChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 041151 301 KIAS-----------------IALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGFNSCRNV 362 (463)
Q Consensus 301 ~~~~-----------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~pg~ 362 (463)
.... .+...++-. .++..++. ++.+ .+-.+++.++.-+..+++.+.|++.|++
T Consensus 380 ~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~-raLklW~~--------lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f 450 (539)
T PLN02590 380 TNPEYLEFKVSKKDTVVNYKDWQISLSRRF-RSLKLWMV--------LRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF 450 (539)
T ss_pred cCHHHhCCcccccccCCCccccCCCCCCch-HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1100 011111111 12222210 1111 2224556666777788999999888899
Q ss_pred ccccCCceeEEeeeccCChh---hHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcH
Q 041151 363 VCNFTEGAMYSFPQIRLPPK---AIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDM 436 (463)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i 436 (463)
++..+..-..+.+++..+.. ..+. -...+ .+.+.+.|......... .+..++|+++. ++++++
T Consensus 451 el~~~~~l~iVcFr~~~~~~~~~~~~~-------ln~~l-~~~l~~~G~~~vs~t~~---~g~~~lR~~i~n~~T~~~dv 519 (539)
T PLN02590 451 EVVTTRYFSLVCFRLAPVDGDEDQCNE-------RNREL-LAAVNSTGKIFISHTAL---SGKFVLRFAVGAPLTEEKHV 519 (539)
T ss_pred EEecCCceEEEEEEecCCCCCHHHHHH-------HHHHH-HHHHHhCCCEEEEeeEE---CCEEEEEEEecCCCCCHHHH
Confidence 88765332233322221110 0000 01233 33344456444432322 34568999998 788999
Q ss_pred HHHHHHHHHHHHHHH
Q 041151 437 PAIMESFKKFNDEFM 451 (463)
Q Consensus 437 ~~~~~~l~~~l~~~~ 451 (463)
+.+++.|.+...++.
T Consensus 520 ~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 520 TEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999988766554
No 340
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=8.4e-12 Score=120.42 Aligned_cols=296 Identities=14% Similarity=0.107 Sum_probs=183.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------cCcee---cCCCcccChH
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------FHTTW---KRQQIGVLII 176 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------~g~~~---~~~~~~~d~~ 176 (463)
-+.++.+.+|+|++ .++.++++-| ..+....+.+++ .||.-|+-+ .|+++ ...-+..+-+
T Consensus 183 ~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~-~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm 253 (519)
T KOG1357|consen 183 EHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLL-GKGSLIISDELNHASLITGARLSGATTRVFRHNDM 253 (519)
T ss_pred HHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceee-cCCcceeeccccchheeccccccCceEEEEecCCH
Confidence 34577777777774 4567888777 666777888888 899888876 55555 2233444444
Q ss_pred HHHHHHHHHHHhcC-Cc----e-eEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchH
Q 041151 177 NDLQQSVAQARSKG-IT----V-RAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSK 249 (463)
Q Consensus 177 ~~l~~~l~~~~~~~-~~----~-~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~ 249 (463)
..||+.|++.-..| |+ . |.+++. .-...-|.+.. +.++++++++|..+++.||+|+....+ ... .
T Consensus 254 ~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g-~tG----r 325 (519)
T KOG1357|consen 254 QGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMG-ATG----R 325 (519)
T ss_pred HHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccC-CCC----c
Confidence 88888888753322 11 1 334333 55556666655 777888999999999999999976542 111 1
Q ss_pred HHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh----hcccCChHHHHHHHHhcCCCC
Q 041151 250 KVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS----IALSPNVPAQIFMGLMVNPLK 325 (463)
Q Consensus 250 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~q~~~~~~l~~~~ 325 (463)
.. .++++. +..+-.|.+++|+|+| |.+| ||+. +++++++.++.... .+..++++.|.....+ +...
T Consensus 326 gv-ce~~g~-d~~dvDImMGtftKSf-ga~G---Gyia---gsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl-~~i~ 395 (519)
T KOG1357|consen 326 GV-CEYFGV-DPEDVDIMMGTFTKSF-GAAG---GYIA---GSKELIDYLRTPSPSALYATSLSPPVAQQILTSV-KHIM 395 (519)
T ss_pred ce-eeccCC-Cchhheeecceehhhc-cccc---ceec---CcHHHHhhhccCCCceeecccCChHHHHHHHHHH-Hhhc
Confidence 11 112111 3333468999999998 6555 9998 79999999876643 2344555566554433 2211
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHh
Q 041151 326 PGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEA 405 (463)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 405 (463)
..++ -...++..+++.+|..+++..|... |+-+...+.+..+-+-+-.|.+ -..+-++ |.+
T Consensus 396 G~dg-----t~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k------------~~~f~r~-~l~ 456 (519)
T KOG1357|consen 396 GEDG-----TNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK------------IVAFSRE-MLE 456 (519)
T ss_pred CCCc-----ccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc------------ccHHHHH-HHh
Confidence 1111 1223346677899999999999887 8777765555333222233332 2333334 555
Q ss_pred cCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 406 TGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 406 ~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
++|.++-......+--+...|++.+ ++.|+++.+++.+..+-+.
T Consensus 457 ~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 457 RNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred cCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 6777765443333222345788877 7889999999988776543
No 341
>PRK06148 hypothetical protein; Provisional
Probab=99.38 E-value=2.1e-10 Score=127.80 Aligned_cols=320 Identities=14% Similarity=0.057 Sum_probs=184.1
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv 160 (463)
++.+.+++.+.+...... ..|. .+.+.++|+.+.+... -.-+.+++++++++|+..+++.... .....|++
T Consensus 640 hp~v~~Ai~~q~~~l~~~-~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~ 711 (1013)
T PRK06148 640 HPRVVAAAARQAARLNTN-TRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIV 711 (1013)
T ss_pred CHHHHHHHHHHHhhcCCc-CCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEE
Confidence 788999998888763111 1221 2445556666654321 1225789999999999999987531 12345555
Q ss_pred c----cCcee---------------------------cC---CCccc-Ch------HHHHHHHHHHHHhcCCceeEEEEE
Q 041151 161 L----FHTTW---------------------------KR---QQIGV-LI------INDLQQSVAQARSKGITVRAMVII 199 (463)
Q Consensus 161 p----~g~~~---------------------------~~---~~~~~-d~------~~~l~~~l~~~~~~~~~~~~i~l~ 199 (463)
. +|... +. ..++. +. .+.+++.+......+.++.+|++.
T Consensus 712 ~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~E 791 (1013)
T PRK06148 712 LDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAE 791 (1013)
T ss_pred EcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEc
Confidence 3 22211 00 00111 11 023555554222222357777766
Q ss_pred C-CCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCC
Q 041151 200 N-PGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWG 277 (463)
Q Consensus 200 ~-p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 277 (463)
- +.+ -|. ..+.+-++++.++|++||+++|.||++..+.-.+ . .+... ..+|+ .. =+.+++|.+ |
T Consensus 792 Pv~g~-gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG-~---~~~a~-e~~gv--~P-----Divt~gK~l-g 857 (1013)
T PRK06148 792 SIPSV-AGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG-S---HWWAF-ETQGV--VP-----DIVTMGKPI-G 857 (1013)
T ss_pred CCcCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC-C---cchhh-hhcCC--Cc-----ceeeecccc-c
Confidence 3 344 344 5577789999999999999999999998752211 1 01111 11211 11 125679999 5
Q ss_pred CCCceeEEEEecCCChhHHHHHHhh--hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 278 ECGQRGGYFEMTNIPPKTVDEIYKI--ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDG 355 (463)
Q Consensus 278 ~~G~R~G~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (463)
.|+.+|.++ +.+++.+.+..- ...+++.++++..++.+.|+ .++ .+++.+..++.-++|.+.
T Consensus 858 -gG~Plgav~---~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~-----------~i~-~e~l~~~~~~~G~~l~~~ 921 (1013)
T PRK06148 858 -NGHPMGAVV---TTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLD-----------IIE-DEDLQRNALEIGNYLLAG 921 (1013)
T ss_pred -CCcceEEEE---EcHHHHhhccCCCccccCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHH
Confidence 689999999 488888877542 22467788888888887764 222 123555566666666666
Q ss_pred hhcC----CCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec-
Q 041151 356 FNSC----RNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL- 430 (463)
Q Consensus 356 L~~~----pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~- 430 (463)
|+++ |-+.-+...| +++-+.+..+... ..........+...+.++||++.+...+ .+.+||...
T Consensus 922 L~~l~~~~~~i~~VrG~G-l~~gvel~~~~~~-----~~~~~~~~~~i~~~~~~~Gvl~~~~g~~-----~~vlr~~Ppl 990 (1013)
T PRK06148 922 LRELQDRFDIIGDVRGMG-LFLGIELVTDRKT-----KAPATAIARYVKNGARERGILIGTEGPH-----DNVLKIRPPL 990 (1013)
T ss_pred HHHHHHhCCCceEEeeec-eEEEEEecCCccc-----cCccHHHHHHHHHHHHhCCeEEeccCCC-----CCEEEEeCCc
Confidence 6553 2222233334 3333223211100 0000001223445566789999774222 246888888
Q ss_pred -CCcCcHHHHHHHHHHHHHHH
Q 041151 431 -PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 431 -~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+++++++++++|.++++++
T Consensus 991 ~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 991 IFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999765
No 342
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.38 E-value=4.5e-10 Score=115.08 Aligned_cols=328 Identities=12% Similarity=0.045 Sum_probs=175.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC-CcEEEcCCcHHHHHHHHHHHhc-CCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP-ELIFLTDGASKGVMQTLNCVIR-GEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 159 (463)
++.+.+++.+.+... ...++. .-..+.+.++|+.+.+........ ..+++++++++|+..+++.... .....|+
T Consensus 76 ~p~v~~Ai~~q~~~~---~~~~~~-~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii 151 (459)
T PRK06931 76 HPDVLQSIQDVLTSG---LPLHTL-DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVI 151 (459)
T ss_pred CHHHHHHHHHHHhhh---cccccc-ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEE
Confidence 678999998877641 111111 112356666777775432110001 1345668999999999986531 2234455
Q ss_pred Ec----cCcee-------------------------c-CCC----cc----cChHHHHHHHHHHHHh----cCCceeEEE
Q 041151 160 LL----FHTTW-------------------------K-RQQ----IG----VLIINDLQQSVAQARS----KGITVRAMV 197 (463)
Q Consensus 160 vp----~g~~~-------------------------~-~~~----~~----~d~~~~l~~~l~~~~~----~~~~~~~i~ 197 (463)
.- +|... + .+. ++ -+. +.+++.+.+... ...++.+|+
T Consensus 152 ~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~iAAvI 230 (459)
T PRK06931 152 SFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGV-KALTYYFENFIEDVESGVRKPAAVI 230 (459)
T ss_pred EECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHH-HHHHHHHHHHHHhhhcCCCceEEEE
Confidence 43 22211 0 000 00 022 334333332211 112467777
Q ss_pred EECCCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC
Q 041151 198 IINPGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW 276 (463)
Q Consensus 198 l~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 276 (463)
+.--..-.|. ..+.+-+++|.++|++||+++|.||+...+.-.+ .+... ..+|+ ..+ +-+++|.+
T Consensus 231 ~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG-----~~~a~-~~~gv--~PD-----ivt~gK~l- 296 (459)
T PRK06931 231 LEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG-----KMFAF-EHAGI--EPD-----IIVMSKAV- 296 (459)
T ss_pred EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc-----hHHHh-hhcCC--CCC-----EEEecccc-
Confidence 7633332354 4577889999999999999999999998752111 11111 12221 121 24579999
Q ss_pred CCCCceeEEEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041151 277 GECGQRGGYFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDG 355 (463)
Q Consensus 277 g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (463)
+ .|+.+|.++ ++++ ++.+.... ..+++.++++..++.+.|+ .+++ +.+.++.++.-++|.+.
T Consensus 297 ~-gG~Pi~av~---~~~~-~~~~~~~~~~~T~~gnpla~aaala~L~-----------~l~~-~~l~~~~~~~G~~l~~~ 359 (459)
T PRK06931 297 G-GGLPLAVLG---IKKE-FDAWQPGGHTGTFRGNQLAMATGLTTLK-----------ILKE-ENLAQNAAERGEWLKAQ 359 (459)
T ss_pred c-CCcceeeee---eHHH-HhhccCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHHHHHHH
Confidence 4 589999877 3554 45553222 2467788888888877764 2211 23444455555555555
Q ss_pred hhc----CCCcccccCCceeEEeeeccCChhhHHHHhhcCCC--ChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 356 FNS----CRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV--PDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 356 L~~----~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
|++ .|.+.-+...|-+ .-+.+..+....+. ...... .-...+...+.++||.+.++..++ +.+|+..
T Consensus 360 L~~l~~~~~~i~~vrG~Glm-~giel~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~-----~~l~~~P 432 (459)
T PRK06931 360 LAELQKRYPCIGNVRGRGLM-IGIEIVDERQPADA-MGSYPADGELAAAIQKACFENGLLLERGGRNG-----NVVRLLP 432 (459)
T ss_pred HHHHHHhCCCeEeEecCceE-EEEEEccCcccccc-cccCCccHHHHHHHHHHHHHCCcEEeecCCCC-----CEEEEEC
Confidence 544 3322223334433 33223211000000 000000 011223445667899998743222 3688888
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
+ .+++++++++++|.++++++.|
T Consensus 433 pl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 433 PLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 8 8999999999999999987654
No 343
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.35 E-value=2.7e-10 Score=116.23 Aligned_cols=204 Identities=13% Similarity=0.126 Sum_probs=117.8
Q ss_pred ceeEEEEECCCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.-...-.|. ..+.+.+++|.++|++||+++|.||++..+.-. + ..... ..+++ .. .|+ +
T Consensus 225 ~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRt-G----~~~a~-~~~gv--~P---Div--~ 291 (443)
T PRK08297 225 DIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLT-G----TAWAY-QQLGV--RP---DIV--A 291 (443)
T ss_pred cEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcc-c----hHHHH-HhcCC--CC---CEE--E
Confidence 6778777633322354 467888999999999999999999999875321 1 11111 12211 11 132 5
Q ss_pred CCcccCCCCCceeEEEEecCCChhHHHHHHh------hhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHH
Q 041151 271 VSKGYWGECGQRGGYFEMTNIPPKTVDEIYK------IASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILES 344 (463)
Q Consensus 271 ~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (463)
++|.+ + +|.+++ ..++.+.+.. ....+++.++++..++.+.|+ .++ .+++.++
T Consensus 292 ~gK~l-~-----~~a~l~---~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~l~-~~~l~~~ 350 (443)
T PRK08297 292 FGKKT-Q-----VCGIMA---GRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILE-----------VIE-EDGLVEN 350 (443)
T ss_pred ecccc-c-----ccceec---chHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHH-----------HHH-hcCHHHH
Confidence 89977 3 233332 3333222211 122466778888887777763 121 1234555
Q ss_pred HHHHHHHHHHHhhc----CCCcc-cccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 345 LRRRARMMTDGFNS----CRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 345 ~~~~~~~l~~~L~~----~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
.+++-+.+.+.|++ .|.+. .+...| .++.+ +++... ....++ ..+.++||++.|+.
T Consensus 351 ~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G-~~~~i--~~~~~~----------~~~~~~-~~l~~~Gvl~~~~~----- 411 (443)
T PRK08297 351 AARQGEYLLARLEELAAEFPAVVSNVRGRG-LMCAF--DLPTTA----------DRDEVI-RRLWEEGVLVLPCG----- 411 (443)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcceeeeccc-eEEEE--EecCHH----------HHHHHH-HHHHHCCEEEecCC-----
Confidence 55666666666654 34332 233444 44443 332210 023344 44557899998742
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
...+|++.+ .+++++++++++|.++++++
T Consensus 412 --~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 --ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred --CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 125888665 88999999999999998764
No 344
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.34 E-value=4.5e-10 Score=118.30 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=104.0
Q ss_pred ccCCCCCC-HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--------------cCcee
Q 041151 102 AYSDSRGI-PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--------------FHTTW 166 (463)
Q Consensus 102 ~Y~~~~g~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--------------~g~~~ 166 (463)
....+.|. .+..+..|+.++ .....+++||++.++..++.+++ .+||.|+++ .|+++
T Consensus 168 dL~~~eG~i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~-~~Gd~VLvdRN~HKSv~hgaLiLsGa~P 239 (720)
T PRK13578 168 DLLIHEGAAKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALL-TPGDLVLFDRNNHKSNHHGALIQAGATP 239 (720)
T ss_pred CCCCCChHHHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence 33334444 455555555554 22478899999999999999998 999999998 33333
Q ss_pred ----cC-CCc----ccChHHH-----HHHHHHHHH-h---cCCceeEEEEECCCCCCccCCCHHHHHHHHHH-hhhCCeE
Q 041151 167 ----KR-QQI----GVLIIND-----LQQSVAQAR-S---KGITVRAMVIINPGNPTGQCLSEANLREILRF-CYQENLV 227 (463)
Q Consensus 167 ----~~-~~~----~~d~~~~-----l~~~l~~~~-~---~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~-a~~~~~~ 227 (463)
+. +.+ +++. +. +++++++.. + .....++++|++|+. -|.++. +++|+++ ++.++ .
T Consensus 240 VYl~P~~n~~Gi~g~I~~-~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~ 313 (720)
T PRK13578 240 VYLETARNPFGFIGGIDA-HCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-Y 313 (720)
T ss_pred EEeeccccccCCcCCCCh-HHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-c
Confidence 21 223 3454 44 888887641 1 011259999999988 599987 6667776 56777 9
Q ss_pred EEeccccccc-ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 228 LLGDEVYQQN-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 228 vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
|++||||... .|.+..+..+...+ +.| .++..++++.|.+|++++++. .+++-+
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al--~~G---aD~p~i~v~QStHKtL~alTQ--aS~LHv 368 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLL--ELN---ENDPGIFVTQSVHKQQAGFSQ--TSQIHK 368 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhh--hcC---CCCCCeEEEEChhhcchhhhh--Hhhhhc
Confidence 9999999654 34211000111111 111 223357999999999843333 455554
No 345
>PLN02452 phosphoserine transaminase
Probab=99.34 E-value=3.6e-10 Score=111.99 Aligned_cols=296 Identities=15% Similarity=0.176 Sum_probs=179.2
Q ss_pred CcHHHHHHHHHHhhhcCC---C---CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 81 FPADAIARAKHYLSLTSG---G---LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~---~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
+|+++++++.+.+.++.+ . ..+.++ -..++-+.+.+.+++..+++-+-+-+++..|++.++..+...++ .+
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~-~~ 94 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLC-KP 94 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcC-CC
Confidence 399999999877654321 1 111222 22455555555666665643222345566788999999999998 89
Q ss_pred CCEEEEc---------------cCcee--c--CCCc---ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 155 GDGVVLL---------------FHTTW--K--RQQI---GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 155 gd~Vlvp---------------~g~~~--~--~~~~---~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
|+++++- +|... . .... .+++ ++++. . ++.+.|.+++-...||+.+..
T Consensus 95 ~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~-~~~~~--~------~~~~~v~~~hnETstGv~~~~- 164 (365)
T PLN02452 95 GDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSV-SEWEL--T------PDAKFVHICANETIHGVEFKD- 164 (365)
T ss_pred CCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCCh-HHcCC--C------CCCcEEEECCCCCCCcEecCc-
Confidence 9988775 43322 1 1111 3555 55421 1 268888889889999996432
Q ss_pred HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 292 (463)
+.++. ++++|+|.+.+... .+..+.. ++ + .+.|..|.+ |++| +|.+++ +
T Consensus 165 -~~~i~------~~~lvVDa~Ss~g~-----~pidv~~-----------~~-v-~~~saqK~l-GP~G--l~~v~v---r 213 (365)
T PLN02452 165 -YPDVG------NVPLVADMSSNFLS-----KPVDVSK-----------YG-V-IYAGAQKNV-GPSG--VTIVII---R 213 (365)
T ss_pred -ccccC------CCeEEEECCccccC-----cccCHHH-----------cC-E-EEEeccccc-CCCC--eEEEEE---c
Confidence 33332 38999999987532 2233332 22 3 446999999 8999 688885 7
Q ss_pred hhHHHHHHhhh-------------hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhh
Q 041151 293 PKTVDEIYKIA-------------SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 293 ~~~~~~l~~~~-------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~ 357 (463)
+++++++.... +...+++....+++..+|+ ...++ ++.+.++.+++.+++++.|+
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~----------~l~~~gGl~~~~~r~~~~a~~l~~~l~ 283 (365)
T PLN02452 214 KDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE----------DLLAQGGLKAMEKRNIRKADLLYDAID 283 (365)
T ss_pred HHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 77776653211 1113455555566665553 12222 66788899999999999999
Q ss_pred cCCCccc--ccC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--C
Q 041151 358 SCRNVVC--NFT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--P 431 (463)
Q Consensus 358 ~~pg~~~--~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~ 431 (463)
+.+|+.. ..+ ...+.+. +.++.. ....++ .+.++++|+...+|..-- + .+|+|+- .
T Consensus 284 ~~~G~y~~~~~~~~rs~~~vs--F~~~~~----------~~~~~f-~~~~~~~g~~~~~G~r~~---g--g~R~s~yna~ 345 (365)
T PLN02452 284 ESNGFYVCPVEKSVRSLMNVP--FTLGGS----------ELEAEF-VKEAAKAGMVQLKGHRSV---G--GMRASIYNAM 345 (365)
T ss_pred hCCCcccCCCChHHhCCeEEE--EEcCCc----------hhHHHH-HHHHHHCCCcccCCcccc---C--ceEEECcCCC
Confidence 8777711 111 1333333 233321 113444 566889999999987432 2 2999998 5
Q ss_pred CcCcHHHHHHHHHHHHH
Q 041151 432 AEEDMPAIMESFKKFND 448 (463)
Q Consensus 432 ~~e~i~~~~~~l~~~l~ 448 (463)
+.++++.+++.++++-+
T Consensus 346 ~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 346 PLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 66666665555555443
No 346
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.33 E-value=5.1e-12 Score=121.06 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=130.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
.+.+++++.++... . ..|+......+|++.+++.++ .+..+++++++.+...++++++ .|++.|++.
T Consensus 8 ~~~m~~a~~~a~~g---d-~~Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~-~~~~~vi~~ 74 (290)
T PF01212_consen 8 TPAMLEAMAAANVG---D-DAYGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHL-RPGESVICA 74 (290)
T ss_dssp -HHEEHHHHHTTSB-----CCTTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHH-HTTEEEEEE
T ss_pred CHHHHHHHHccccC---C-cccCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHH-hcCCceecc
Confidence 56778888554433 2 268877677889999998875 4556788889999999999998 899999986
Q ss_pred ----------------cCcee---cCCC-cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC-ccCCCHHHHHHHHHH
Q 041151 162 ----------------FHTTW---KRQQ-IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT-GQCLSEANLREILRF 220 (463)
Q Consensus 162 ----------------~g~~~---~~~~-~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt-G~~~s~~~l~~l~~~ 220 (463)
.|.++ +..+ ..+|+ +.|++.+.....-.+++++|+|++|+|.. |.++|.+++++|.++
T Consensus 75 ~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~-~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~ 153 (290)
T PF01212_consen 75 DTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTP-EDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISEL 153 (290)
T ss_dssp TTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-H-HHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHH
T ss_pred ccceeeeeccchhhHhcCcEEEECCCcccCCCCH-HHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHH
Confidence 55555 4445 88999 99999998742211368999999999964 889999999999999
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIY 300 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 300 (463)
|+++|+.|..|-+=-.-.. .....++..+.... .++..|++|.+ ++++ |.+++ +++++++...
T Consensus 154 a~~~gl~lhmDGARl~~a~--~~~~~~~~e~~~~~---------D~v~~~~tK~~-g~~~---Gavl~--~~~~~i~~~~ 216 (290)
T PF01212_consen 154 AREHGLPLHMDGARLANAA--AALGVSLAEIAAGA---------DSVSFGGTKNG-GAPG---GAVLA--GNKEFIAKAR 216 (290)
T ss_dssp HHHHT-EEEEEETTHHHHH--CHHHHHHHHHHTTS---------SEEEEETTSTT--SSS---EEEEE--ESHHHHHHHH
T ss_pred HHhCceEEEEehhhHHHhh--hcccccHHHHhhhC---------CEEEEEEEccc-cccc---ceEEE--echHHHHHHH
Confidence 9999999999987321100 01112344443222 25678999987 5544 55554 6888766554
Q ss_pred hh
Q 041151 301 KI 302 (463)
Q Consensus 301 ~~ 302 (463)
..
T Consensus 217 ~~ 218 (290)
T PF01212_consen 217 RQ 218 (290)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 347
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.30 E-value=7.4e-09 Score=107.13 Aligned_cols=239 Identities=11% Similarity=0.110 Sum_probs=143.9
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCC---------CCC--CcEEEcCCcHHHHHHHHHHHhc---C-----------
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYP---------SDP--ELIFLTDGASKGVMQTLNCVIR---G----------- 153 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---------~~~--~~i~~t~G~~~al~~~~~~l~~---~----------- 153 (463)
+...+..+....++.+.+.+|+.+..+.. -.+ ..=++|+|+++++..++.+--. .
T Consensus 117 n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~ 196 (522)
T TIGR03799 117 NLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVARE 196 (522)
T ss_pred CcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccc
Confidence 33444444456899999999998765311 011 2346788888888876655310 1
Q ss_pred -----------CCCEEEEc-------------cCc---ee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE--C
Q 041151 154 -----------EGDGVVLL-------------FHT---TW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVII--N 200 (463)
Q Consensus 154 -----------~gd~Vlvp-------------~g~---~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~--~ 200 (463)
++..|+++ .|. .+ .+.++.+|+ +.|++.+++..+.+ ++.+.++ .
T Consensus 197 gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~-~~L~~~i~~~~~~g--~~~~~vvata 273 (522)
T TIGR03799 197 GLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDV-DALRDKCAELAEQN--IKPLAIVGVA 273 (522)
T ss_pred cchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCH-HHHHHHHHHHHHCC--CCcEEEEEEe
Confidence 12356665 343 22 455688999 99999998654443 3444444 6
Q ss_pred CCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC
Q 041151 201 PGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG 280 (463)
Q Consensus 201 p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G 280 (463)
.++.||.+-+ +++|+++|+++|+|+.+|.+|+.... . ......+..++ .. -..+..|.+|++++..|
T Consensus 274 Gtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~-~---~~~~r~~l~gl----e~--aDSit~d~HK~l~~P~g 340 (522)
T TIGR03799 274 GTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATL-L---SNTYRHLLKGI----ER--ADSVTIDAHKQLYVPMG 340 (522)
T ss_pred cCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHH-h---CHHHHHHhcCc----hh--CCEEEEChhhcCCcCcc
Confidence 6779999977 77888889999999999999986432 0 11111221211 11 12577999998755545
Q ss_pred ceeEEEEecCCChhHHHHHHhhhh------------hcccCChHHHH-HHHHhcCCCCCCCchHHHH-HHHHHHHHHHHH
Q 041151 281 QRGGYFEMTNIPPKTVDEIYKIAS------------IALSPNVPAQI-FMGLMVNPLKPGDISYEQF-VRESKGILESLR 346 (463)
Q Consensus 281 ~R~G~~~~~~~~~~~~~~l~~~~~------------~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (463)
+|++++ .+++..+.+..... .++..++.... .+...++ .+ ..-.+.+.++..
T Consensus 341 --~G~llv--r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~----------~lG~~G~~~ii~~~~ 406 (522)
T TIGR03799 341 --AGMVLF--KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLH----------IIGRKGYELLIDQSI 406 (522)
T ss_pred --cEEEEE--eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHH----------HHhHHHHHHHHHHHH
Confidence 898887 45666555533100 01111222111 1222221 11 122556777778
Q ss_pred HHHHHHHHHhhcCCCcccccC
Q 041151 347 RRARMMTDGFNSCRNVVCNFT 367 (463)
Q Consensus 347 ~~~~~l~~~L~~~pg~~~~~~ 367 (463)
+..+++.+.|++.|++++..+
T Consensus 407 ~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 407 EKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred HHHHHHHHHHhhCCCeEEecC
Confidence 888999999999889988754
No 348
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.29 E-value=7.4e-10 Score=105.50 Aligned_cols=314 Identities=14% Similarity=0.117 Sum_probs=186.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc--CCCCEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR--GEGDGVV 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~gd~Vl 159 (463)
.+++.+++.+.+.........|.... ..++-+++++.+- -+-..++++|++++|.++++..... +.-|.|.
T Consensus 68 hP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~P------~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa 140 (442)
T KOG1404|consen 68 HPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKLP------GDLKVVFFVNSGSEANELALKMARLYTGNLDIIA 140 (442)
T ss_pred ChHHHHHHHHhhhhhEEeeccccCCc-HHHHHHHHHHhCC------CCceEEEEecCCchHHHHHHHHHHHhcCCceEEE
Confidence 78899999877765333445555433 4577777777763 2334688999999999999887531 3334444
Q ss_pred Ec---cCcee---------------------------c---CCCcccC----hHHHHHHHHHHHH-hcCCc-eeEEEEEC
Q 041151 160 LL---FHTTW---------------------------K---RQQIGVL----IINDLQQSVAQAR-SKGIT-VRAMVIIN 200 (463)
Q Consensus 160 vp---~g~~~---------------------------~---~~~~~~d----~~~~l~~~l~~~~-~~~~~-~~~i~l~~ 200 (463)
.- +|... | ...|+-+ ..+.+.+.+.+.- ..++. +.+.+...
T Consensus 141 ~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEt 220 (442)
T KOG1404|consen 141 RRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAET 220 (442)
T ss_pred eeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeeh
Confidence 43 22111 0 0011111 1133333333221 11223 34444444
Q ss_pred CCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC
Q 041151 201 PGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC 279 (463)
Q Consensus 201 p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 279 (463)
-.-.-|++ +++--+++..++|+++|.+.|.||+...+.-. .++... ...+-+=-|-|++|.+ | .
T Consensus 221 IqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRt-----G~~wgf--------e~h~v~PDIvTmAKgi-G-n 285 (442)
T KOG1404|consen 221 IQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRT-----GHMWGF--------ESHGVVPDIVTMAKGI-G-N 285 (442)
T ss_pred hccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccc-----cccccc--------cccCCCccHHHHHhhc-c-C
Confidence 45544544 44557999999999999999999999885331 133332 2222333457999999 5 7
Q ss_pred CceeEEEEecCCChhHHHHHHhhh-h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 280 GQRGGYFEMTNIPPKTVDEIYKIA-S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 280 G~R~G~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
|+.+|.+++ ++++.+.+.+.. . .+++.++++..++.+.|+ .++ .+++.+.-++.-.+|.+.|.
T Consensus 286 G~Pl~AVvt---t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~-----------Vik-ee~LqE~aa~vG~yl~~~l~ 350 (442)
T KOG1404|consen 286 GFPLGAVVT---TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLK-----------VIK-EENLQENAAEVGSYLLEKLA 350 (442)
T ss_pred CCcceeeec---CHHHHHHHHhccccccccCCCchhHHHHHHHHH-----------HHH-HHhHHHHHHHHHHHHHHHHH
Confidence 899999995 899999998776 3 578888888888888874 222 33455555666667777776
Q ss_pred cC-CCcccc---cCCceeEEeeeccCChhhHHHHhhcCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 358 SC-RNVVCN---FTEGAMYSFPQIRLPPKAIEAAKRAGK-VPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 358 ~~-pg~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
++ .+..++ ...| +++ .+++-... .+.... ........+.++++|++|--|..+|. .+||+..
T Consensus 351 ~l~d~h~iIGdVRG~G-Lm~--GvE~V~dk---~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~-----vfriaPPlc 419 (442)
T KOG1404|consen 351 ALKDKHPIIGDVRGRG-LML--GVELVSDK---SEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN-----VFRIAPPLC 419 (442)
T ss_pred HHhhcCCceeecccce-eEE--EEEEeccc---CCCCCcchHHHHHHHHHHHHhCeeeecccccce-----EEEecCCee
Confidence 54 122222 2222 222 23321100 000000 01234455778999999977776664 6999998
Q ss_pred CCcCcHHHHHHHH
Q 041151 431 PAEEDMPAIMESF 443 (463)
Q Consensus 431 ~~~e~i~~~~~~l 443 (463)
.+.+|++.+++..
T Consensus 420 iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 420 ITKEDIDFAVEYF 432 (442)
T ss_pred ccHHHHHHHHHHH
Confidence 7889996666655
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.29 E-value=7e-10 Score=116.75 Aligned_cols=300 Identities=11% Similarity=0.043 Sum_probs=163.5
Q ss_pred CCCCCC-HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee---
Q 041151 104 SDSRGI-PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW--- 166 (463)
Q Consensus 104 ~~~~g~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~--- 166 (463)
..+.|. .+..+..|+.++ .....+++||++.++..++.+++ .+||.|+++ .|+++
T Consensus 191 l~~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 191 LDHSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSA-PAGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred CCCChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 334443 455555555553 22478899999999999999998 999999998 55555
Q ss_pred -cC-CCc----ccC-----hHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 167 -KR-QQI----GVL-----IINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 167 -~~-~~~----~~d-----~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
+. +.+ +++ . +.+++.++..... +++++++|++|+. -|.++. +++|+++|..++ |++||||.
T Consensus 263 ~P~rn~~Gi~g~I~~~~~~~-e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 263 RPTRNAYGILGGIPQSEFQH-ATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred cccccccCCccCCCccccCH-HHHHHHHHhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccch
Confidence 22 222 334 7 8899988764321 1344788999965 699988 566777777776 68999997
Q ss_pred cc-ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCcee-EEEEecCCChhHHHHHHhhhhh--cccCCh
Q 041151 236 QN-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVDEIYKIASI--ALSPNV 311 (463)
Q Consensus 236 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 311 (463)
.. .|.+..+..+.... +- ++++.++++.|.+|+++ ++.- +++-+ .+.- -.+++...... +.+++-
T Consensus 335 ah~~F~p~~~~~sam~~--ga----~~~~~i~vtQStHKtL~---alTQaS~LHv-kg~v-d~~~~n~a~~m~~STSPsY 403 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSG--GR----VEGKVIYETQSTHKLLA---AFSQASMIHV-KGDV-NEETFNEAYMMHTTTSPHY 403 (714)
T ss_pred hhhccCcccCCcChhhc--CC----CCCCceEEEEchhhccc---chhHHhHHHH-cCCC-CHHHHHHHHHHHcCCCcHH
Confidence 54 34221111222111 10 22235799999999984 4443 34333 1111 12344444331 223332
Q ss_pred HHHHHHHHhcCCCCCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHhhcCCC------cccccCCc--------------
Q 041151 312 PAQIFMGLMVNPLKPGDISYEQFVR--ESKGILESLRRRARMMTDGFNSCRN------VVCNFTEG-------------- 369 (463)
Q Consensus 312 ~~q~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~pg------~~~~~~~g-------------- 369 (463)
+..+.+..+. .+++ .-+++.+...+....+++.+.++++ +.+..++.
T Consensus 404 ~l~ASLD~a~-----------~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~ 472 (714)
T PRK15400 404 GIVASTETAA-----------AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDST 472 (714)
T ss_pred HHHHHHHHHH-----------HHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCcccc
Confidence 2222221111 1111 1233444455555556666655544 33332220
Q ss_pred --e-------eEEe--ee--ccCCh-hhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCc
Q 041151 370 --A-------MYSF--PQ--IRLPP-KAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEED 435 (463)
Q Consensus 370 --~-------~~~~--~~--~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~ 435 (463)
| ++.+ ++ +..|. +.-....+.|+ ....+.+.|.++||.+.-.+.+.. .+=++++.+.++
T Consensus 473 whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gi--pg~~v~~~L~e~gI~~E~~d~~~i-----Lfl~s~g~t~~~ 545 (714)
T PRK15400 473 WHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGI--PASIVAKYLDEHGIVVEKTGPYNL-----LFLFSIGIDKTK 545 (714)
T ss_pred ccCcccccccccccCCceEEEEeCCCCCCccccccCC--CHHHHHHHHHHcCCEEEecCCCeE-----EEEeCCCCCHHH
Confidence 0 0100 00 00111 00000000111 344566778999999987554443 356666688899
Q ss_pred HHHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFND 448 (463)
Q Consensus 436 i~~~~~~l~~~l~ 448 (463)
++.++++|.++-+
T Consensus 546 ~~~L~~aL~~f~~ 558 (714)
T PRK15400 546 ALSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998887733
No 350
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.28 E-value=7.7e-10 Score=109.75 Aligned_cols=321 Identities=12% Similarity=0.057 Sum_probs=185.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh-----c-CCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI-----R-GEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-----~-~~g 155 (463)
.+++.+++.+.+...+.. +.+. ..+.+ -..+|+.+-+.-.- -+-+.|++|+|++++++.+++... + +|.
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~-~~~~-~t~~P--a~~LA~~L~~~aP~-~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~ 136 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHV-MFGG-FTHEP--AIELAEKLAELAPE-GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQ 136 (449)
T ss_pred CHHHHHHHHHHHHhCCch-hhcc-cCCch--HHHHHHHHHHhCCC-CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCc
Confidence 678889998888873211 1111 11222 33444444332000 113589999999999999999764 1 344
Q ss_pred CEEEEc-----cCcee----------------------------cC-------CCcc----cChHHHHHHHHHHHHhcCC
Q 041151 156 DGVVLL-----FHTTW----------------------------KR-------QQIG----VLIINDLQQSVAQARSKGI 191 (463)
Q Consensus 156 d~Vlvp-----~g~~~----------------------------~~-------~~~~----~d~~~~l~~~l~~~~~~~~ 191 (463)
.+.++. +|..+ +. ..+. -.. ++|++.+..... .
T Consensus 137 r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a-~~le~~i~~~g~--~ 213 (449)
T COG0161 137 RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAA-DELEALILEHGP--E 213 (449)
T ss_pred ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHH-HHHHHHHHhcCc--c
Confidence 443443 11111 11 0111 124 667776665421 2
Q ss_pred ceeEEEEECCCCC-CccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEe
Q 041151 192 TVRAMVIINPGNP-TGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFH 269 (463)
Q Consensus 192 ~~~~i~l~~p~NP-tG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (463)
++-++++.--..- .|..+ ++.-++++.++|++||+++|.||+-..|.-+ + .-++. .+.|+ .. =+-
T Consensus 214 ~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRT-G---~~FA~--e~~gi--~P-----Di~ 280 (449)
T COG0161 214 TIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRT-G---KMFAC--EHAGI--VP-----DIL 280 (449)
T ss_pred cEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcC-c---hhhhh--hhcCC--CC-----Cee
Confidence 5666655533333 67555 4456999999999999999999998875321 1 12222 22221 12 235
Q ss_pred cCCcccCCCCCceeEEEEecCCChhHHHHHHhh------hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHH
Q 041151 270 TVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI------ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILE 343 (463)
Q Consensus 270 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (463)
+++|.+ .-.=+.+|.+++ +.++.+.+..- .+.+++.++++.+++.+.|+ ..+ .+.+.+
T Consensus 281 ~~aKGL-T~GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~-----------i~e-~e~l~~ 344 (449)
T COG0161 281 CLAKGL-TGGYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD-----------ILE-EEDLLE 344 (449)
T ss_pred eecccc-cccchhhHhHhh---hHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH-----------HHH-hcCHHH
Confidence 678987 434456777764 78888888663 22567888888888877763 222 234566
Q ss_pred HHHHHHHHHHHHhhc-CC---CcccccCCceeEEeeeccCChhhHHHHhhcCC-CChHHHHHHHHHhcCeEeeCCCCCCC
Q 041151 344 SLRRRARMMTDGFNS-CR---NVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGK-VPDVFYCLRLLEATGISTVPGSGFGQ 418 (463)
Q Consensus 344 ~~~~~~~~l~~~L~~-~p---g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gI~v~pg~~f~~ 418 (463)
+.++.-.++.+.|++ ++ .+.-+. .-|++.-+.+..+.. +...+ ......+...+.++|+.++|. |.
T Consensus 345 ~~~~~~~~l~~~L~~~l~~~p~VgdVR-~~Gli~~iElv~d~~-----t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g~ 415 (449)
T COG0161 345 RVAEIGAYLQAGLQAALADHPLVGDVR-GLGLIGAIELVADKA-----TKTPFEARVGARVRAAALERGLLIRPL---GD 415 (449)
T ss_pred HHHHHHHHHHHHHHHhcccCCcEEEee-ccceEEEEEEecccc-----cccchhhhHHHHHHHHHHHCCeEEeec---CC
Confidence 666777777777776 32 222222 233444433321111 00000 012445667788899999995 21
Q ss_pred CCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 419 KEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 419 ~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.+=++.. .+++|++++++++++.+++..+.
T Consensus 416 -----~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 416 -----VIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred -----EEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 3555655 78999999999999999887654
No 351
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.28 E-value=2.6e-09 Score=108.93 Aligned_cols=199 Identities=12% Similarity=0.140 Sum_probs=112.0
Q ss_pred ceeEEEEECCCCCCccC-CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEec
Q 041151 192 TVRAMVIINPGNPTGQC-LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHT 270 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 270 (463)
++.+|++.-...-.|.+ .+.+.+++|.++|++||+++|+||++..+..+ + ..... ..+++ .. .++ +
T Consensus 218 ~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt-G----~~~a~-~~~gv--~P---Di~--~ 284 (431)
T TIGR03251 218 DIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLT-G----TAWAY-QQLGV--QP---DIV--A 284 (431)
T ss_pred cEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCcc-c----hHHHH-HhcCC--CC---CEE--E
Confidence 67888777444445654 57788999999999999999999999975331 1 11111 11211 11 132 4
Q ss_pred CCcccCCCCCceeEEEEecCCChhHHHHHH---h---hhhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHH
Q 041151 271 VSKGYWGECGQRGGYFEMTNIPPKTVDEIY---K---IASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILES 344 (463)
Q Consensus 271 ~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~---~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (463)
++|.+ +. .|++. .+++.+... . ....+++.+++...++.+.|+ .+++ ..+.++
T Consensus 285 ~gK~~---~~--~g~~~----~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~l~~-~~l~~~ 343 (431)
T TIGR03251 285 FGKKT---QV--CGIMA----GRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILE-----------IIEE-ERLVDN 343 (431)
T ss_pred ecccC---cc--ceEEe----cchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHHHH
Confidence 78975 22 46665 333222111 1 112356677888777777763 1111 123334
Q ss_pred HHHHHHHHHHHhhc----CCCc-ccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 041151 345 LRRRARMMTDGFNS----CRNV-VCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQK 419 (463)
Q Consensus 345 ~~~~~~~l~~~L~~----~pg~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 419 (463)
.+++-+.+.+.|++ .|++ ......| .+..+ +++.. +....+...|.++||++.|..
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G-~~~~i--~~~~~-----------~~~~~~~~~l~~~Gvl~~~~g----- 404 (431)
T TIGR03251 344 ARVQGAHLLARLHELAAEFPHLVSNPRGRG-LMCAF--DLPST-----------ADRDEVIRQLYREGVLLLGCG----- 404 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCccceecccccc-eeEEE--EeCCH-----------HHHHHHHHHHHhCCeEEecCC-----
Confidence 44444445444433 3322 2223333 44342 33321 022223445668899997732
Q ss_pred CCCcEEEEEec--CCcCcHHHHHHHHHH
Q 041151 420 EGIFHLRTTIL--PAEEDMPAIMESFKK 445 (463)
Q Consensus 420 ~~~~~lRis~~--~~~e~i~~~~~~l~~ 445 (463)
...+|++.+ .+++|+++++++|.+
T Consensus 405 --~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 405 --ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred --CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 135888887 889999999999875
No 352
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=7.6e-10 Score=112.80 Aligned_cols=214 Identities=14% Similarity=0.142 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhc
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDM 255 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 255 (463)
+.+++.+... +.++.+|++.-...-.|.+. +.+-+++|.++|++||+++|.||++..+... + .+... ..+
T Consensus 239 ~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrt-G----~~fa~-e~~ 309 (464)
T TIGR00699 239 EEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGAT-G----KFWAH-EHW 309 (464)
T ss_pred HHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCC-c----chhHH-Hhc
Confidence 5566666531 12578877764444457666 6778999999999999999999999765321 1 11111 122
Q ss_pred CCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh-hhhcccCChHHHHHHHHhcCCCCCCCchHHHH
Q 041151 256 GLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQF 334 (463)
Q Consensus 256 ~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 334 (463)
|+ ... . -+.+++|.+ |..| +++ +.+ ........ ...+++.+++...++.+.|+ .
T Consensus 310 gv--~~~-P--Di~t~gK~l-g~gG----~~~---~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~-----------~ 364 (464)
T TIGR00699 310 NL--DDP-P--DMVTFSKKF-QTAG----YFF---HDP-AFRPNKPYRQFNTWMGDPSRALILREIIQ-----------E 364 (464)
T ss_pred CC--CCC-C--CEEEehhhh-ccCC----ccc---cch-hccCCCCcccccCCCCCHHHHHHHHHHHH-----------H
Confidence 21 100 1 126789988 4223 343 232 21111111 22466777888777776653 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----CC-ccccc--CCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcC
Q 041151 335 VRESKGILESLRRRARMMTDGFNSC----RN-VVCNF--TEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATG 407 (463)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~L~~~----pg-~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 407 (463)
++ .+++.++.+++-+++.+.|+++ |. +.-+. .. |+++- ++++... ....+...+.++|
T Consensus 365 l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~g--ie~~~~~-----------~~~~i~~~~~~~G 429 (464)
T TIGR00699 365 IK-RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIA--WDTPDEA-----------KRDKLLKKARNNG 429 (464)
T ss_pred HH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEE--EecCCHH-----------HHHHHHHHHHHCC
Confidence 21 1234445555555666666543 31 22222 33 33333 3443210 1223445566789
Q ss_pred eEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 408 ISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 408 I~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
|++.+. +.+.+||+.. .+++|++.++++|.++
T Consensus 430 vl~~~~-------g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 430 VNIGGC-------GVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred cEEecC-------CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 999763 2247999998 8999999999999875
No 353
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.26 E-value=5.1e-09 Score=114.93 Aligned_cols=304 Identities=13% Similarity=0.120 Sum_probs=170.4
Q ss_pred CCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEE-cCCcHHHHHHHH---HHHhcCCCC----EEEEc-------
Q 041151 100 LGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFL-TDGASKGVMQTL---NCVIRGEGD----GVVLL------- 161 (463)
Q Consensus 100 ~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~~---~~l~~~~gd----~Vlvp------- 161 (463)
.+.|.| .+|+.++...+.+++.+..|.+ ++-+ .+|++++....+ +.+...+|+ +|++|
T Consensus 528 ~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn 603 (954)
T PRK05367 528 LHPFAPAEQAAGYRELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN 603 (954)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh
Confidence 455555 4567788888888888877753 3444 445655553333 322124565 58887
Q ss_pred ------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 162 ------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 162 ------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
.|.++ .+....+|+ +.|++.+.+. +.++.+|++++|++- |.+. +++++|+++|+++|+++++|
T Consensus 604 p~sa~~~G~~vv~v~~d~~G~iD~-~~L~~~i~~~---~~~la~V~it~pst~-G~~e--~~I~eI~~i~h~~G~~v~VD 676 (954)
T PRK05367 604 PASAVMAGMKVVVVACDENGNIDL-DDLRAKAEEH---ADNLAAIMITYPSTH-GVFE--ETIREICEIVHEHGGQVYLD 676 (954)
T ss_pred HHHHHHCCCEEEEECCCCCCCcCH-HHHHHHHhcc---CCCeEEEEEEcCCCC-eeec--CCHHHHHHHHHHcCCEEEEE
Confidence 55655 334578999 9999998752 115788888898876 4431 23888899999999999999
Q ss_pred ccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC---CceeEEEEecCCChhHHHHHHhhh-----
Q 041151 232 EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC---GQRGGYFEMTNIPPKTVDEIYKIA----- 303 (463)
Q Consensus 232 eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~---G~R~G~~~~~~~~~~~~~~l~~~~----- 303 (463)
.++...... ..+.. ++ +. .++..|.+|+|+... |=-+|.+.+ .+.+...+-...
T Consensus 677 gA~~~al~~----l~~pg----~~----GA---Di~~~s~HK~f~~P~G~GGPg~G~l~v---r~~l~p~lpg~~v~~~~ 738 (954)
T PRK05367 677 GANMNAQVG----LARPG----DI----GA---DVSHLNLHKTFCIPHGGGGPGVGPIGV---KAHLAPFLPGHPVQIAG 738 (954)
T ss_pred CcChhhccC----CCChh----hc----CC---CEEEecCcccCCCCcCCCCCceEEEee---cccccccCCCCccCcCC
Confidence 999643221 11111 11 22 378899999973222 222788875 333332221110
Q ss_pred --h--hcccCChHHHHHHHHhcCCCCCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeE--Eee
Q 041151 304 --S--IALSPNVPAQIFMGLMVNPLKPGDISYEQFVR--ESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMY--SFP 375 (463)
Q Consensus 304 --~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~--~~~ 375 (463)
. .....+.+.|....... ..|...+- -+++..+.--.+.+++.+.|.+...+.+..+.+..+ ..+
T Consensus 739 ~~~~~g~v~ta~~g~al~~~~a-------~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~ 811 (954)
T PRK05367 739 GETGIGAVSAAPFGSASILPIS-------WMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECIL 811 (954)
T ss_pred CCCCcCcchhHHHHHHHHHHHH-------HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEE
Confidence 0 01111222221111100 11211111 122333333377888898887642343333322111 122
Q ss_pred ec-cCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 376 QI-RLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 376 ~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
++ +++.. .+. +..+ +.+.|.++|+.... ..|.. .+.+||++. .+.+||++++++|+++..+..+
T Consensus 812 ~~~~~~~~-------~g~-~~~d-i~krL~d~G~~~~t-~~~pv---~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 812 DLRPLKES-------TGI-TVDD-IAKRLIDYGFHAPT-MSFPV---AGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred Eeeccccc-------CCC-CHHH-HHHHHHHCCCeEee-cCCcc---CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 22 22211 011 2344 44556889998655 33433 347899888 8889999999999999888766
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.26 E-value=6.2e-09 Score=112.55 Aligned_cols=304 Identities=12% Similarity=0.108 Sum_probs=173.8
Q ss_pred CCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---c----CCCCEEEEc--------
Q 041151 100 LGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---R----GEGDGVVLL-------- 161 (463)
Q Consensus 100 ~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~----~~gd~Vlvp-------- 161 (463)
.+.|.| .+|+..+..++..|+.+..|.+ +.-+..+|++++-...+.++- . ...++|++|
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 456665 4677888888888888887865 233344455554443333331 1 123578887
Q ss_pred -----cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 162 -----FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 162 -----~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
.|.++ .+..+.+|+ ++|++.+++. +.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|-
T Consensus 593 asa~~~G~~Vv~V~~d~~G~iDl-e~L~~~i~~~---~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQDGNIDL-VDLKNKAEQH---GDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred HHHHHCCCEEEEeccCCCCCcCH-HHHHHHHhhc---CCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEe
Confidence 45555 345788999 9999999751 22799999999999 788743 38889999999999999999
Q ss_pred cccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC-----CCCCceeEEEEecCCChhHHHHHHh--h---
Q 041151 233 VYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW-----GECGQRGGYFEMTNIPPKTVDEIYK--I--- 302 (463)
Q Consensus 233 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-----g~~G~R~G~~~~~~~~~~~~~~l~~--~--- 302 (463)
++..... . ..+. .+.+-.|+++|.+|+|+ |.|| +|.+.+ .+++...+-. +
T Consensus 666 Aq~~al~-~---l~~P-----------g~~GaDi~~~s~HKtf~~P~G~GGPg--~G~i~v---r~~L~~~lPg~~v~~t 725 (939)
T TIGR00461 666 ANMNAQV-G---LTSP-----------GDLGADVCHLNLHKTFCIPHGGGGPG--MGPIGV---KSHLIPFLPKHDVVSM 725 (939)
T ss_pred cChhhCC-C---CCCc-----------cccCCCEEEecCCccCCCCCCCCCCC--eEEEEE---hhhchhhcCCCccccc
Confidence 9865211 0 1111 11122488899999886 4444 799986 3333322210 0
Q ss_pred -------hhhcccCC-hHHH----HHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--C
Q 041151 303 -------ASIALSPN-VPAQ----IFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFT--E 368 (463)
Q Consensus 303 -------~~~~~~~~-~~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~--~ 368 (463)
+......+ ...+ ..+..++... -.+-+++..+.--.+.+++.+.|.+ ++.+..+ .
T Consensus 726 ~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~l---------G~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~ 794 (939)
T TIGR00461 726 ITGIGGSKSIGSVSAAPYGSASILPISWMYIKMM---------GNEGLPKASVVAILNANYMATRLKD--HYPILFVGTL 794 (939)
T ss_pred ccCCCCccccccccccccCcHHHHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCC
Confidence 00000000 1111 1111111100 0111344455556678899999987 3444332 2
Q ss_pred ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEecCCcCcHHHHHHHHHHHHH
Q 041151 369 GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFND 448 (463)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~~~~e~i~~~~~~l~~~l~ 448 (463)
+.++-=+.++++.. . +..+. +..+ +.+.|.++|+..-. ..|.. .+.-.+|.+-..+.+||+++++.+.++.+
T Consensus 795 ~~~~hEfv~~~~~~--~--~~~g~-~~~d-IakrL~d~G~hapt-~~~pv-~g~lmiepTE~eskeelD~f~~al~~I~~ 866 (939)
T TIGR00461 795 KHVAHECILDLRPL--K--AKTGI-EAID-VAKRLQDYGFHAPT-LSFPV-PGTLMVEPTESESLEELDRFCDAMIAIKE 866 (939)
T ss_pred CceeEEEEEeccch--h--hhcCC-CHHH-HHHHHHhCCeeccc-cCCcc-CCeEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence 22221111233210 0 01111 2344 45567788997543 33443 34335666666888999999999998888
Q ss_pred HHHH
Q 041151 449 EFME 452 (463)
Q Consensus 449 ~~~~ 452 (463)
+..+
T Consensus 867 e~~~ 870 (939)
T TIGR00461 867 EINA 870 (939)
T ss_pred HHHH
Confidence 7765
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.26 E-value=4.6e-09 Score=110.62 Aligned_cols=159 Identities=11% Similarity=0.016 Sum_probs=99.3
Q ss_pred CCCCC-HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee----
Q 041151 105 DSRGI-PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW---- 166 (463)
Q Consensus 105 ~~~g~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~---- 166 (463)
.+.|. .+..+..|+.++ .....+++||++.++..++.+++ .+||.|+++ .|+++
T Consensus 192 ~~~G~i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~ 263 (713)
T PRK15399 192 DHTGPHLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAA-PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLK 263 (713)
T ss_pred CCChHHHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeeEEec
Confidence 33443 455555555554 22478899999999999999998 999999998 55555
Q ss_pred cC-CCcc---------cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEE-Eeccccc
Q 041151 167 KR-QQIG---------VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVL-LGDEVYQ 235 (463)
Q Consensus 167 ~~-~~~~---------~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~v-i~Deay~ 235 (463)
+. +.++ ++. +.+++++++.... +++++++|++|+. -|.++. +++|++.| ++.+ ++||||.
T Consensus 264 P~~n~~Gi~g~I~~~~~~~-e~I~~~i~~~p~~-~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhg 334 (713)
T PRK15399 264 PTRNALGILGGIPRREFTR-DSIEEKVAATTQA-QWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWV 334 (713)
T ss_pred ccccccCCcCCCChhhccH-HHHHHHHHhCCCc-CCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccch
Confidence 22 2222 245 7777788764321 2457899999965 699988 55566666 4555 6999997
Q ss_pred cc-ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 236 QN-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 236 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
.. .|.+..+..+.... .+ ..+.-++++.|.+|++++++. .+++-+
T Consensus 335 ah~~F~p~~~~~sam~~---~~---~aD~~i~~tQStHKtL~alTQ--aS~iHv 380 (713)
T PRK15399 335 PYTHFHPIYQGKSGMSG---ER---VPGKVIFETQSTHKMLAAFSQ--ASLIHI 380 (713)
T ss_pred hhhhcCcccCCcChhhC---CC---CCCeeeeeeeehhccccccch--heeeee
Confidence 53 34211221222111 00 122345779999999843333 555554
No 356
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=3.5e-09 Score=98.65 Aligned_cols=324 Identities=15% Similarity=0.120 Sum_probs=199.9
Q ss_pred CCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcC-CCCCccCCCCCCHHHHHHHHHHHHHhcCCCCC
Q 041151 51 LGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTS-GGLGAYSDSRGIPGVRKEVAEFIERRDGYPSD 129 (463)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~ 129 (463)
-|.++.+|+...-.. +...| ++.+++++.+.+...- .....|. .+-.+.++++...+ .
T Consensus 57 eGk~ylDflsaysaV-------nqGhc----hpki~~aLqeq~~kLtlssrafYn------d~~~~f~~~vt~lf----~ 115 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAV-------NQGHC----HPKIIKALQEQADKLTLSSRAFYN------DVLGEFAEYVTKLF----G 115 (427)
T ss_pred Cccchhhhhhhhhhc-------ccCCC----CHHHHHHHHHHHhHhhhhhHHHhh------hhHHHHHHHHHHhc----C
Confidence 356677776665433 33444 8999999987766520 1122333 33334455554442 3
Q ss_pred CCcEEEcCCcHHHHHHHHHHHh-----cC--C-CCEEEEc-----cCcee--------c--CCCcc------------cC
Q 041151 130 PELIFLTDGASKGVMQTLNCVI-----RG--E-GDGVVLL-----FHTTW--------K--RQQIG------------VL 174 (463)
Q Consensus 130 ~~~i~~t~G~~~al~~~~~~l~-----~~--~-gd~Vlvp-----~g~~~--------~--~~~~~------------~d 174 (463)
-+.++.+|-+.|+...++...- .+ | ...+++. +|... + -++|+ -|
T Consensus 116 ~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d 195 (427)
T KOG1402|consen 116 YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGD 195 (427)
T ss_pred cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCC
Confidence 4567778877999998887652 01 3 3444554 33332 0 01111 16
Q ss_pred hHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH-HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHH
Q 041151 175 IINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA-NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLM 253 (463)
Q Consensus 175 ~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~-~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~ 253 (463)
. ++|+.++++. +..++++.--+---|++.+++ -+.+..++|.+||+++|.||+...+.-++..-......+.|
T Consensus 196 ~-eale~~l~~~-----~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~P 269 (427)
T KOG1402|consen 196 A-EALEVALKSP-----NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRP 269 (427)
T ss_pred H-HHHHHHhcCC-----CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCC
Confidence 6 8899998873 788877665577788776655 69999999999999999999998865432211111222211
Q ss_pred hcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHH
Q 041151 254 DMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYE 332 (463)
Q Consensus 254 ~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 332 (463)
+ . |. +.|.+ +-.=+.+..++ .+.++...+..... .+++.+++...++.++|+
T Consensus 270 D---------i-vi---lgKal-SGG~~Pvsavl---~~~~im~~~~pgeHgsTyggNpLg~~vaiAale---------- 322 (427)
T KOG1402|consen 270 D---------I-VI---LGKAL-SGGVYPVSAVL---ADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALE---------- 322 (427)
T ss_pred C---------e-EE---Eeccc-cCCeeeeEEEE---ecHHHHhccCCCccccccCCChHHHHHHHHHHH----------
Confidence 1 1 22 56888 32334566666 48888777655543 578899999999888874
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC----C-cccccCCceeEEeeecc-CChhhHHHHhhcCCCChHHHHHHHHHhc
Q 041151 333 QFVRESKGILESLRRRARMMTDGFNSCR----N-VVCNFTEGAMYSFPQIR-LPPKAIEAAKRAGKVPDVFYCLRLLEAT 406 (463)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~L~~~p----g-~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 406 (463)
.+.+ +++.++-++.-..|++.|++++ + ++.+...| ++.-+-+. .+.+ ..+..+.| ..+++.
T Consensus 323 -vi~e-ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrG-l~~ai~i~~~~~~---------~~~aw~~c-l~lk~~ 389 (427)
T KOG1402|consen 323 -VIVE-EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRG-LLNAIVINPSKTS---------GQDAWDVC-LALKEN 389 (427)
T ss_pred -HHHH-HHHHHHHHHHHHHHHHHHHhccccccchhheeeccc-eEEEEEecccccc---------chhHHHHH-Hccccc
Confidence 3332 3566666777778888888863 2 23333333 44433332 1221 01245544 447888
Q ss_pred CeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 407 GISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 407 gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
|++.-|-. ..-+|++.. .+++|++++++.+.+.+.
T Consensus 390 g~LAkptH-------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 390 GLLAKPTH-------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccccCCCC-------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 88877732 237999998 799999999999988763
No 357
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.22 E-value=5.4e-09 Score=112.36 Aligned_cols=302 Identities=14% Similarity=0.104 Sum_probs=171.5
Q ss_pred CCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---cC---C-CCEEEEc--------
Q 041151 100 LGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---RG---E-GDGVVLL-------- 161 (463)
Q Consensus 100 ~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~---~-gd~Vlvp-------- 161 (463)
.+.|.| .+|+.++-.++.+++.+..|.+.. .+.. ++++++-...+.++- +. + .++|++|
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p-~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQP-NSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 367777 889988888899888887665433 2222 234444444444432 12 2 3577887
Q ss_pred -----cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 162 -----FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 162 -----~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
.|.++ .+.+..+|+ ++|++.+.+. ..++.+|++++|++-.+. ++++++|+++|+++|++|++|-
T Consensus 606 asa~~~GieVv~Vp~D~~G~iDl-e~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vDg 678 (954)
T PRK12566 606 ASAQMAGMRVVIVECDPDGNVDL-DDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMDG 678 (954)
T ss_pred HHHHHCCCEEEEeccCCCCCcCH-HHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEEe
Confidence 45555 234678999 9999999731 117888888898875433 4569999999999999999999
Q ss_pred cccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCC---ceeEEEEecCCChhHHHHHHhhh------
Q 041151 233 VYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECG---QRGGYFEMTNIPPKTVDEIYKIA------ 303 (463)
Q Consensus 233 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G---~R~G~~~~~~~~~~~~~~l~~~~------ 303 (463)
++..... ....... + + -.|+.++++|+|++..| .-+|.+.+ .+.+...+.+.-
T Consensus 679 A~~~a~~----~l~~Pg~----~----G---ADi~~~s~HKtf~~P~G~GGP~vG~iav---~~~L~pfLp~~P~~d~~G 740 (954)
T PRK12566 679 ANLNAQV----GLARPAD----I----G---ADVSHMNLHKTFCIPHGGGGPGMGPIGV---RAHLAPFVANHPVVPVEG 740 (954)
T ss_pred eChhhcc----CCCChhh----c----C---CCEEEecCCcccCcCccCCCCccchhhh---hhhhhhhccCCCCcCCCC
Confidence 9864222 1112222 1 2 23888999999832222 22444332 232222222210
Q ss_pred ----hhcccCChHHH----HHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEee
Q 041151 304 ----SIALSPNVPAQ----IFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFP 375 (463)
Q Consensus 304 ----~~~~~~~~~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~ 375 (463)
....+.....+ .++..++.. .-.++.+.+..-..+.+++.+.|.+..++.+.++++.++.-.
T Consensus 741 ~~~r~ga~S~~~~gsa~~l~~A~~Yi~~----------lG~eLk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEf 810 (954)
T PRK12566 741 PDPNNGAVSAAPWGSASILPISWMYIAM----------MGPQLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHEC 810 (954)
T ss_pred CCCCCCceeecccchHHHHHHHHHHHHH----------HCHHHHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEE
Confidence 00010111111 111122110 011122333333557778888887643555533333322211
Q ss_pred ecc---CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 041151 376 QIR---LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 376 ~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+. +|.. .+ .+..+...+|+ ++||...- ..|. ..+++||+.. .+.+||++++++|+++.++.
T Consensus 811 ii~~~~l~~~-------~g-~~~~dvakRL~-d~Gihapt-~~fP---v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 811 ILDLRPLKAQ-------TG-ISEEDVAKRLM-DYGFHAPT-MSFP---VPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred EEEccccccc-------cC-CCHHHHHHHHH-HCCcEEeE-Eeec---cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 122 2211 01 12345555554 88997644 3343 2457999999 89999999999999998887
Q ss_pred HH
Q 041151 451 ME 452 (463)
Q Consensus 451 ~~ 452 (463)
.+
T Consensus 878 ~~ 879 (954)
T PRK12566 878 GK 879 (954)
T ss_pred HH
Confidence 55
No 358
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.21 E-value=4e-09 Score=104.67 Aligned_cols=299 Identities=13% Similarity=0.047 Sum_probs=177.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
|...++++.+.+.. ..++++. ..++-+.+.+.+++..+.+-+.+-++++.|++.+++.++..++.++|+.|++.
T Consensus 16 ~~~~~~~~~~~~~~----~~HRs~~--F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~ 89 (374)
T TIGR01365 16 PGWSIEELKNAPLG----RSHRSKL--GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAW 89 (374)
T ss_pred chhhHHHHhhhhcc----cCcCCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEE
Confidence 33356666554443 1233332 34555555555555555332222456688899999999999972378888886
Q ss_pred --------------cCc-ee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh
Q 041151 162 --------------FHT-TW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY 222 (463)
Q Consensus 162 --------------~g~-~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~ 222 (463)
+|. .+ ...+..+|+ +.++. + +.|++++.-..||...+. +++. +
T Consensus 90 g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~-~~ve~----------~-~~v~~vhnETSTGv~npv---~~i~---~ 151 (374)
T TIGR01365 90 ESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDL-KKVDF----------K-NDVVFTWNGTTSGVRVPN---GDFI---P 151 (374)
T ss_pred CHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCH-HHcCC----------C-CCEEEecCCCchheeccc---cccc---c
Confidence 454 23 344556788 77762 1 236688888889999885 3333 2
Q ss_pred h-CCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHh
Q 041151 223 Q-ENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYK 301 (463)
Q Consensus 223 ~-~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 301 (463)
+ +++++|+|.+-+... .+ ..+.. -.+++.|..|++.++|| ++++++ +++.+++..+
T Consensus 152 ~~~~~lliVDavSs~g~----~~-l~~d~-------------iDv~~tgsQK~L~~ppG--ls~v~v---s~~Al~~~~~ 208 (374)
T TIGR01365 152 ADREGLTICDATSAAFA----QD-LDYHK-------------LDVVTFSWQKVLGGEGA--HGMLIL---SPRAVARLES 208 (374)
T ss_pred ccCCCcEEEEccchhcC----CC-CChhH-------------CcEEEEechhccCCCCc--eEEEEE---CHHHHHHHhh
Confidence 3 589999999877532 22 22221 24788999999966677 678875 7777666542
Q ss_pred hh---------h-----------h-cccCChHHHHHHHHhcCCCCCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHhhc
Q 041151 302 IA---------S-----------I-ALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE--SKGILESLRRRARMMTDGFNS 358 (463)
Q Consensus 302 ~~---------~-----------~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~ 358 (463)
.. . . ..+++.+.-.++.+++ ...+...++ ++.+.++++++++++++.+++
T Consensus 209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~-------~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~ 281 (374)
T TIGR01365 209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWL-------DALKWAESIGGLKPLIARADDNLAVLEAFVAK 281 (374)
T ss_pred cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHH-------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 10 0 0 1122222222322222 111122232 677889999999999999999
Q ss_pred CCC-cccccC----CceeEEeeeccCChhhHHHHhhcCCCCh-----HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEE
Q 041151 359 CRN-VVCNFT----EGAMYSFPQIRLPPKAIEAAKRAGKVPD-----VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTT 428 (463)
Q Consensus 359 ~pg-~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis 428 (463)
+ | +.+... .......+ ..|.+.++. .+.+ .......|+++||.+.+|..-- .+ ..+||+
T Consensus 282 l-g~l~~~~~~~~~rS~tvt~v--~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~--~~-~~fRIg 350 (374)
T TIGR01365 282 N-NWIHFLAETPEIRSNTSVCL--KVVDPAIDA-----LDEDAQADFAKELISTLEKEGVAYDIGSYRD--AP-SGLRIW 350 (374)
T ss_pred C-CCcccCCCChhhcCCCeEEE--EeCCccccc-----cccchhhHHHHHHHHHHHHCCEEEecccccc--CC-CceEEe
Confidence 8 6 665542 12223332 222210000 0001 2335677888899998766432 22 469999
Q ss_pred ec--CCcCcHHHHHHHHHH
Q 041151 429 IL--PAEEDMPAIMESFKK 445 (463)
Q Consensus 429 ~~--~~~e~i~~~~~~l~~ 445 (463)
.. .+.+|++.+++.|.=
T Consensus 351 ~~G~i~~~di~~l~~~l~~ 369 (374)
T TIGR01365 351 CGATVEKSDLECLCPWLDW 369 (374)
T ss_pred cCCcCCHHHHHHHHHHHHH
Confidence 98 788999999988853
No 359
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.18 E-value=1.7e-08 Score=99.17 Aligned_cols=297 Identities=12% Similarity=0.114 Sum_probs=177.6
Q ss_pred CCcHHHHHHHHHHhhhcCC---C---CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEE-EcCCcHHHHHHHHHHHhc
Q 041151 80 VFPADAIARAKHYLSLTSG---G---LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIF-LTDGASKGVMQTLNCVIR 152 (463)
Q Consensus 80 ~~p~~~~~a~~~~~~~~~~---~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~-~t~G~~~al~~~~~~l~~ 152 (463)
-+|+++++++.+.+.+... . ..+.++ -..++-+.+.+.+++..+++-+ .+|+ ++.|++.++..+...|+
T Consensus 14 ~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~~ea~~~Nll- 89 (364)
T PRK12462 14 ALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDE-YGVVFLQGGSSLQFSMIPMNFS- 89 (364)
T ss_pred CCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCC-CeEEEEeccHHHHHHHHHHHcC-
Confidence 3499999999987776432 1 222222 1245555555556666565323 2555 55668999999999998
Q ss_pred CCCCEEE-Ec---------------cCcee--cC----CC--cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccC
Q 041151 153 GEGDGVV-LL---------------FHTTW--KR----QQ--IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQC 208 (463)
Q Consensus 153 ~~gd~Vl-vp---------------~g~~~--~~----~~--~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~ 208 (463)
.+|+.++ +. +| .+ .. .+ ..++. +.++ +.+ +.+.|.+|+-...||+.
T Consensus 90 ~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~-~~~~--~~~------d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 90 RPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSL-AELD--WDA------RAPFRHYVSNETVEGLQ 159 (364)
T ss_pred CCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCH-HHhc--cCC------CCcEEEEccCCCCceEe
Confidence 8999654 22 33 23 11 11 23344 4431 111 57888888888889998
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
++ ++.+.++.++|+|.+-..+. . +..+ +++ .+++.|..|.+ |+|| ++.+++
T Consensus 160 ~~--------~~~~~~~~llvvD~sS~~~s----~-pid~-----------~~~--dvi~agsQKnl-gP~G--ltvviv 210 (364)
T PRK12462 160 FP--------DAAGLPDSPLIADMSSDFMS----R-PFDV-----------EAY--GMVYAHAQKNL-GPAG--VTVAII 210 (364)
T ss_pred cC--------cccccCCCeEEEEcCchhhC----C-CCCh-----------HHc--cEEEeeccccC-CCCc--eEEEEE
Confidence 86 23334689999998876532 1 2233 222 37889999999 8999 567765
Q ss_pred cCCChhHHHHHHhh------------h-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHH----HHHHHHHHHHHHHHH
Q 041151 289 TNIPPKTVDEIYKI------------A-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVR----ESKGILESLRRRARM 351 (463)
Q Consensus 289 ~~~~~~~~~~l~~~------------~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 351 (463)
+++.+++..+. . +...+++...-+++...++ ++. -++.+.++.+++.++
T Consensus 211 ---s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~-----------~i~~e~GGl~~~~~r~~~ka~~ 276 (364)
T PRK12462 211 ---RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR-----------WIRDEIGGVHAMRDINARKAAM 276 (364)
T ss_pred ---CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH-----------HHHHhccCHHHHHHHHHHHHHH
Confidence 77776654321 1 1223555666666666653 221 145677778888999
Q ss_pred HHHHhhcCCCccccc--C--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEE
Q 041151 352 MTDGFNSCRNVVCNF--T--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRT 427 (463)
Q Consensus 352 l~~~L~~~pg~~~~~--~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRi 427 (463)
+++.+.+.+|+.... + ...+-+. ++++... .+.+| ...++++|+.-.-|..- -+.+|+
T Consensus 277 ly~~id~~~~~~~~~~~~~~RS~mnv~--f~~~~~~----------l~~~f-~~~a~~~gl~~lkGhr~-----vgg~Ra 338 (364)
T PRK12462 277 LYATLDALNEVIDCHAHRAARSTMNVA--FRFRQPR----------LDTLF-KEQSTEAGFCGLSGHRS-----IGGIRA 338 (364)
T ss_pred HHHHHHhCCCcccCCCChhhcCcceEE--EEcCCHH----------HHHHH-HHHHHHCCCccccCCcc-----cCceEE
Confidence 999999886554332 2 2233343 3333221 13454 45578899988766532 124999
Q ss_pred EecCCcCcHHHHHHHHHHHHHHHHHH
Q 041151 428 TILPAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 428 s~~~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
|+=+... .+.+++|.++++++.++
T Consensus 339 s~yna~~--~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 339 SLYNAVS--EQAVSRLCAFLKDFAIR 362 (364)
T ss_pred EcCCCCC--HHHHHHHHHHHHHHHHh
Confidence 9983211 35666666666666655
No 360
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.14 E-value=1.2e-08 Score=103.79 Aligned_cols=257 Identities=13% Similarity=0.091 Sum_probs=160.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---c-CC---
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---R-GE--- 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~-~~--- 154 (463)
++...+.+...+...-.....|+ +..++.+.+..++.+..+.+ ..-.=.+|+|+++++.+++.+.- + ..
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred HHHHHHHHHHHHhhcCCCcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 56666666666665322334444 56899999999999888876 33355688899999997777642 0 00
Q ss_pred CC------EEEEc-------------cCcee-----cCCCcccChHHHHHHHHHHHHhcCCceeE--EEEECCCCCCccC
Q 041151 155 GD------GVVLL-------------FHTTW-----KRQQIGVLIINDLQQSVAQARSKGITVRA--MVIINPGNPTGQC 208 (463)
Q Consensus 155 gd------~Vlvp-------------~g~~~-----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~--i~l~~p~NPtG~~ 208 (463)
+. .|++| .|... ......+|+ +++++++.+. +-. |+-+.++-+||.+
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~-~~l~~~i~~~------t~~g~vV~~aGtT~~G~i 223 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDV-DALEEAIDEN------TIGGVVVGTAGTTDTGSI 223 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCH-HHHHHHHHhh------ccCceEEEEecCCCCCcc
Confidence 11 57777 44433 222789999 9999999984 433 7778999999998
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccC-CCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQ-DERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
+++++|.++|+++++|+.+|.+|..+... .+... .+ .++ -+.. .-+..+++|.++ +-.-+||++
T Consensus 224 ---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~-~~-----~f~---l~~v-dSIt~d~HK~g~--aP~~~G~il 288 (460)
T COG0076 224 ---DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG-RW-----DFG---LEGV-DSITVDGHKYGL--APIGCGVVL 288 (460)
T ss_pred ---CCHHHHHHHHHHcCCcEEEEccccceeecccCccc-hh-----hcC---CCCc-eEEEECcccccC--CCCCceEEE
Confidence 55888888999999999999999887541 11111 10 011 1122 235578999754 556699999
Q ss_pred ecCCCh-hHHHHHHhhhh---------hcccCChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHh
Q 041151 288 MTNIPP-KTVDEIYKIAS---------IALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGF 356 (463)
Q Consensus 288 ~~~~~~-~~~~~l~~~~~---------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L 356 (463)
+ .++ ++.+.+..... .+...++++-.++..+.. +..+ .+..+++.++.-++.+++.+.|
T Consensus 289 ~--rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~--------l~~lG~eGy~~l~~~~~~~a~~la~~l 358 (460)
T COG0076 289 F--RDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYAN--------LRRLGREGYRKLLDRTLELARYLAEEL 358 (460)
T ss_pred E--ECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHH--------HHHhCHhHHHHHHHHHHHHHHHHHHHH
Confidence 8 456 45444432111 122223333222222211 1111 2334556667778899999999
Q ss_pred hcCCCccccc-CCceeEEe
Q 041151 357 NSCRNVVCNF-TEGAMYSF 374 (463)
Q Consensus 357 ~~~pg~~~~~-~~g~~~~~ 374 (463)
++.+.+++.. |..+...|
T Consensus 359 ~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 359 EKLGDFELVNEPELPIVAF 377 (460)
T ss_pred HhCCCcEeecCCccceEEE
Confidence 9986688765 54444443
No 361
>PLN02263 serine decarboxylase
Probab=99.11 E-value=1.6e-07 Score=94.96 Aligned_cols=282 Identities=8% Similarity=-0.020 Sum_probs=170.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC--CCCEEEEc-------------cCcee----cC
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG--EGDGVVLL-------------FHTTW----KR 168 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~gd~Vlvp-------------~g~~~----~~ 168 (463)
+..++.+.+-+|+.+..|.+-+.-.=++|+|+++++..++.+-- + +...++++ .|.++ ..
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aAR-e~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGR-EVFPDGILYASRESHYSVFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHH-hhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence 46899999999999888864321134778999999998877753 3 33456666 55555 44
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe-----EEEecccccccccCCCC
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL-----VLLGDEVYQQNIYQDER 243 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~-----~vi~Deay~~~~~~~~~ 243 (463)
..+.+|+ +.|++++.+. ..++-+|+.+.+.-++|.+=+ +++|.++|+++|+ |+-+|.+|+.+...--.
T Consensus 209 ~~g~mD~-~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~ 281 (470)
T PLN02263 209 VSGEIDC-ADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK 281 (470)
T ss_pred CCCcCcH-HHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc
Confidence 5688999 9999999762 112445556788999999944 7888888888886 99999999876431000
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhh----h--hhcccCChHHHHHH
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKI----A--SIALSPNVPAQIFM 317 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~--~~~~~~~~~~q~~~ 317 (463)
....+. + ..... =+..+.+|+++ ....+|.+++ ....++.+... . ..+...++....++
T Consensus 282 ~~~~~d-----f----~~~vD-SIsvD~HK~l~--~P~~cgvll~---R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al 346 (470)
T PLN02263 282 RAPKVT-----F----KKPIG-SVSVSGHKFVG--CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHAPI 346 (470)
T ss_pred cccccC-----C----CcCcc-EEEECCccccC--CCcCEEEEEE---ehhhHhhhccChHhhCCCCCCcCCCCCcHHHH
Confidence 111110 0 11111 24578889763 5677999987 33334433221 1 11233333333222
Q ss_pred HHhcCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCceeEEeeeccCChhhHHHHhhcCCCCh
Q 041151 318 GLMVNPLKPGDISYEQF-VRESKGILESLRRRARMMTDGFNSCRNVV-CNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPD 395 (463)
Q Consensus 318 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~pg~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (463)
..+.. +..+ .+..+++.++.-++.+++.+.|++. |+. +..|.....++ +.|. +
T Consensus 347 ~lW~~--------L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f---~~p~-------------~ 401 (470)
T PLN02263 347 FLWYT--------LNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF---ERPK-------------D 401 (470)
T ss_pred HHHHH--------HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE---ecCc-------------h
Confidence 22211 0011 1224455666777788899999888 554 45566655554 3221 1
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 041151 396 VFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDEFM 451 (463)
Q Consensus 396 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~ 451 (463)
.. ..+|..+.+- ...++|++. .+.+.++++++.|++..+...
T Consensus 402 ~~------~~~gW~L~~~--------~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~ 445 (470)
T PLN02263 402 EE------FVRRWQLACQ--------GNIAHVVVMPSVTIEKLDYFLKELVEKRSTWY 445 (470)
T ss_pred HH------hhcceEEccC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhh
Confidence 11 1346666541 125888888 467888999988887776543
No 362
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.04 E-value=2.2e-09 Score=105.91 Aligned_cols=238 Identities=15% Similarity=0.128 Sum_probs=139.6
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh------cCCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI------RGEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~------~~~g 155 (463)
++.+.+++.+.+... .......-..+.+.++++.+.+..+ -..+.+++++++++|++.+++... ..++
T Consensus 34 ~p~i~~ai~~~~~~~----~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~ 107 (339)
T PF00202_consen 34 HPEIAEAIAEQANKL----NYVSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAYTG 107 (339)
T ss_dssp -HHHHHHHHHHHHHC----SSCSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHT
T ss_pred ccccchhHHHHhhhc----ccccccceeccchhhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhcccccccccC
Confidence 678888988887762 1112233345677778888776632 134599999999999999998764 2233
Q ss_pred -CEEEEc----cCcee----------------cCCCc-----ccChHHH----------HHHHHHHHHhcCCceeEEEEE
Q 041151 156 -DGVVLL----FHTTW----------------KRQQI-----GVLIIND----------LQQSVAQARSKGITVRAMVII 199 (463)
Q Consensus 156 -d~Vlvp----~g~~~----------------~~~~~-----~~d~~~~----------l~~~l~~~~~~~~~~~~i~l~ 199 (463)
..|+.. +|... +...+ -.+. .. +++.+..... .++.+|++.
T Consensus 108 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~iaavivE 184 (339)
T PF00202_consen 108 RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNA--DEIAAVIVE 184 (339)
T ss_dssp TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEE
T ss_pred CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcC--CcEEEEEEe
Confidence 455554 22221 00000 0122 22 3333333222 267777776
Q ss_pred CCCCCCcc-CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCC
Q 041151 200 NPGNPTGQ-CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGE 278 (463)
Q Consensus 200 ~p~NPtG~-~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 278 (463)
--..-.|. ..+.+-+++|.++|++||+++|.||++..+.-. +. ...... .++ ..+ | -+++|.+ +
T Consensus 185 Pi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRt-G~-~~a~~~--~gv----~PD---i--v~~gK~l-~- 249 (339)
T PF00202_consen 185 PIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRT-GK-FFASEH--YGV----DPD---I--VTFGKGL-G- 249 (339)
T ss_dssp SSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTT-SS-SSGHHH--HTS----SSS---E--EEEEGGG-G-
T ss_pred ccccccCccccccchhhehcccccccccceeccccccccccc-CC-ccceec--ccc----cCc---c--cccccch-h-
Confidence 33333454 446677999999999999999999999986321 12 111111 122 332 3 3356999 4
Q ss_pred CCceeEEEEecCCChhHHHHHHhhh-hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041151 279 CGQRGGYFEMTNIPPKTVDEIYKIA-SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFN 357 (463)
Q Consensus 279 ~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 357 (463)
.|+.+|.+++ ++++.+.+.... ..++..++++..++.+.|+ .+++ .++.++.+++-+.+.+.|+
T Consensus 250 gG~p~sav~~---~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~-----------~~~~-~~~~~~~~~~g~~l~~~L~ 314 (339)
T PF00202_consen 250 GGLPISAVLG---SEEIMEAFQPGSHGSTFGGNPLSCAAALATLE-----------ILEE-EDLLERVRELGERLREGLR 314 (339)
T ss_dssp TTSSEEEEEE---EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccc---cchhhccccccccccccccchHhhhhhhhHHH-----------hhcc-HHHHHHHHHHHHHHHHHHH
Confidence 5799999994 888877764433 2467778888888877763 2221 2345555666666666665
Q ss_pred c
Q 041151 358 S 358 (463)
Q Consensus 358 ~ 358 (463)
+
T Consensus 315 ~ 315 (339)
T PF00202_consen 315 E 315 (339)
T ss_dssp H
T ss_pred H
Confidence 4
No 363
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.04 E-value=5e-07 Score=89.68 Aligned_cols=319 Identities=17% Similarity=0.137 Sum_probs=189.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC-CCCEEE-
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG-EGDGVV- 159 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vl- 159 (463)
.+..++++.. .+ ..|........|.+.+++.++ -+.++.|..+..+-..++..++ + ||+.+.
T Consensus 56 S~~m~aAM~~--GD-----D~Y~gdpSv~~Lee~vael~G--------~E~alpthqGRgaE~Il~~~~~-~~~g~e~g~ 119 (467)
T TIGR02617 56 TQSMQAAMMR--GD-----EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLI-KKREQEKGL 119 (467)
T ss_pred CHHHHHHHHc--CC-----cccccCchHHHHHHHHHHHhC--------CceEEECCCCchHHHHHHHhhc-ccccccccc
Confidence 4666666664 22 357766667899999999985 3557888777888889998887 6 555444
Q ss_pred ------Ec--------------cCcee-----c-------C--CCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCC
Q 041151 160 ------LL--------------FHTTW-----K-------R--QQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNP 204 (463)
Q Consensus 160 ------vp--------------~g~~~-----~-------~--~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NP 204 (463)
++ .|+.+ + . ....+|+ +.|++++++...+ +...+... ..|.-
T Consensus 120 ~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl-~~le~~I~~~g~~--~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 120 DRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDL-EGLERGIEEVGPN--NVPYIVATITCNSA 196 (467)
T ss_pred cccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCH-HHHHHHHhhcCCC--CceeeeeeEEEecC
Confidence 12 44433 1 1 2467899 9999999864111 22232222 11222
Q ss_pred CccCCCHHHHHHHHHHhhhCCeEEEecccccc--ccc----CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCC
Q 041151 205 TGQCLSEANLREILRFCYQENLVLLGDEVYQQ--NIY----QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGE 278 (463)
Q Consensus 205 tG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 278 (463)
-|+.+|.+.++++.++|++||+.++.|-+=-. -.| .......++..+..++ .... ..+..|+||.+ +
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~----~~~a-Dsvt~slsKgl-g- 269 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET----YKYA-DMLAMSAKKDA-M- 269 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh----hccC-CEEEEEcCCCC-C-
Confidence 47899999999999999999999999964211 000 0011234566554443 2221 24668999987 4
Q ss_pred CCceeEEEEecCCCh---hHHHHHHhhhh------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 041151 279 CGQRGGYFEMTNIPP---KTVDEIYKIAS------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRA 349 (463)
Q Consensus 279 ~G~R~G~~~~~~~~~---~~~~~l~~~~~------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (463)
..+|-+++. .++ ++.++.+...- ...+.+.-...+++.-|.... -.+++.+ --+..
T Consensus 270 --ApvGg~Lag-~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-----~~~yl~~-------ri~qv 334 (467)
T TIGR02617 270 --VPMGGLLCF-KDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-----NLDWLAY-------RINQV 334 (467)
T ss_pred --CcccceEEe-cchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-----cHHHHHH-------HHHHH
Confidence 444544442 244 33344333221 133556666666665554221 1112221 12335
Q ss_pred HHHHHHhhcCCCcccccCCceeEEeeecc--CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeC-CCC-CCCC------
Q 041151 350 RMMTDGFNSCRNVVCNFTEGAMYSFPQIR--LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVP-GSG-FGQK------ 419 (463)
Q Consensus 350 ~~l~~~L~~~pg~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~p-g~~-f~~~------ 419 (463)
++|.+.|.+. |+.+.. .||.-+++|.. +|.- ...+ -....++..+..+.||--.- |+. ++..
T Consensus 335 ~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lphi--p~~~----fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~ 406 (467)
T TIGR02617 335 QYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPHI--PADQ----FPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQ 406 (467)
T ss_pred HHHHHHHHhC-CCcEEe-cCccEEEEehhhhCCCC--Chhh----CcHHHHHHHHHHHcCcceEeecceecccCCCCCcc
Confidence 6888889887 888877 78877776542 1210 0001 12456677888899987554 322 1211
Q ss_pred --CCCcEEEEEec---CCcCcHHHHHHHHHHHHHH
Q 041151 420 --EGIFHLRTTIL---PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 420 --~~~~~lRis~~---~~~e~i~~~~~~l~~~l~~ 449 (463)
+.-..+|+++. =+.+.++...+++..+.++
T Consensus 407 ~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 11247999999 4678899888888776654
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.02 E-value=5.7e-08 Score=98.64 Aligned_cols=156 Identities=17% Similarity=0.192 Sum_probs=108.2
Q ss_pred ccCCCCCC-HHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc-------------cCcee-
Q 041151 102 AYSDSRGI-PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL-------------FHTTW- 166 (463)
Q Consensus 102 ~Y~~~~g~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp-------------~g~~~- 166 (463)
.-..+.|. .+..+..|+.++ .....+++||++.++..++.+++ .+||.|+++ .|..+
T Consensus 64 ~Ll~p~G~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~-~~GD~VLvdRN~HKSi~~glilaGa~Pv 135 (557)
T COG1982 64 SLLDPEGPIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVL-TPGDKVLVDRNCHKSIHHGLILAGATPV 135 (557)
T ss_pred cccCCCccHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhc-CCCCEEEecCCccHHHHHHHHHcCCceE
Confidence 33344444 456666666654 22378999999999999999998 999999999 55554
Q ss_pred ---c-CC-----CcccChHHHHHHHHHHHHhcCCce-eEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 167 ---K-RQ-----QIGVLIINDLQQSVAQARSKGITV-RAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 167 ---~-~~-----~~~~d~~~~l~~~l~~~~~~~~~~-~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
+ .+ -.+++. +.+++++.+.. .. |+++++||.. -|.++. +++|++++.++++|+++|+++..
T Consensus 136 yl~p~~np~~gi~ggI~~-~~~~~~l~~~~----~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~ 206 (557)
T COG1982 136 YLEPSRNPLYGIIGGIPL-ETFKEALLAHP----DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPA 206 (557)
T ss_pred EecCCCCccccccCCCCH-HHHHHHHHhCh----hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcc
Confidence 1 22 256799 99999887642 34 8899999987 599988 66777788899999999999975
Q ss_pred cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCce-eEEEEe
Q 041151 237 NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR-GGYFEM 288 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R-~G~~~~ 288 (463)
..- .....+. .. ...+.+++.-|.+|.++ ++. ..++-+
T Consensus 207 ~~~-~~~~l~~-~~---------~~~~~~~~tqS~HK~l~---alSQaS~iHv 245 (557)
T COG1982 207 HFD-FSPMLPE-SA---------LNGGADFVTQSTHKLLA---ALSQASMIHV 245 (557)
T ss_pred ccc-ccccCcc-hh---------hhcCceEEEechhhhhh---hhhhhHHHhh
Confidence 421 1111111 11 12346799999999883 554 444444
No 365
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.02 E-value=5.8e-08 Score=93.43 Aligned_cols=213 Identities=12% Similarity=0.071 Sum_probs=131.4
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-----CCCC
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-----GEGD 156 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~gd 156 (463)
.+++.+++.+...........|-.-+ .-.+.+.+.+...+ -.++.|++.+++++|+..++..-.+ .+-+
T Consensus 74 npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~ 147 (433)
T KOG1401|consen 74 NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSGTEANETALKFARKFTGKKHPEK 147 (433)
T ss_pred CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCCcHHHHHHHHHHHHhhcccCCcc
Confidence 67888888777665322333333322 23444444444321 2788999999999999999987541 1111
Q ss_pred --EEEEc----cCcee-------------cCCC--------cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc-cC
Q 041151 157 --GVVLL----FHTTW-------------KRQQ--------IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTG-QC 208 (463)
Q Consensus 157 --~Vlvp----~g~~~-------------~~~~--------~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG-~~ 208 (463)
.++.- +|... +.+. .--|. ..+++.++... ....+||+.--.---| ..
T Consensus 148 ~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~-t~l~k~~~~h~---~~IaAVIvEPiqGaGG~~p 223 (433)
T KOG1401|consen 148 KTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDS-TALEKLFESHK---GEIAAVIVEPIQGAGGIIP 223 (433)
T ss_pred ceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCH-HHHHHHHHhCC---CceEEEEEecccCCCCccc
Confidence 24443 33222 1110 11155 88999988731 1357776663333344 34
Q ss_pred CCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEe
Q 041151 209 LSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEM 288 (463)
Q Consensus 209 ~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 288 (463)
..+|-+..|..+|+++++++|.||++..+.-.+ ..-..++ ++. .. -+.++.|.+ + .|+.+|..+
T Consensus 224 ~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~---~~~--~P-----DI~t~aK~L-~-gGlPigA~~- 287 (433)
T KOG1401|consen 224 ADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEY---FGV--TP-----DITTVAKPL-G-GGLPIGATG- 287 (433)
T ss_pred CCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHH---hCc--CC-----cceeehhhc-c-CCceeEEEe-
Confidence 567789999999999999999999998753211 1111111 111 11 236789999 4 689999999
Q ss_pred cCCChhHHHHHHhh----hhhcccCChHHHHHHHHhcC
Q 041151 289 TNIPPKTVDEIYKI----ASIALSPNVPAQIFMGLMVN 322 (463)
Q Consensus 289 ~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~ 322 (463)
++.++.+.+..- +..+++.+++...++...|.
T Consensus 288 --v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~ 323 (433)
T KOG1401|consen 288 --VRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLD 323 (433)
T ss_pred --ehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHH
Confidence 488888877532 23577888888888887764
No 366
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.00 E-value=1.8e-07 Score=102.58 Aligned_cols=297 Identities=10% Similarity=0.102 Sum_probs=166.4
Q ss_pred CcHHHHHHHHHHhhhcCCCCCccCCC--CC----CHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 81 FPADAIARAKHYLSLTSGGLGAYSDS--RG----IPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~Y~~~--~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
.|+.+++++.+...-+ ..++.|.+. +| +.++++.|+++.+ ++++++-++.|++.+.+.++.++-..+
T Consensus 117 ~P~~v~~~i~~~~~~~-TaytPYqaEisQG~lqal~~~Qt~ia~LtG------~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 117 VPPVILRNILENPGWY-TQYTPYQAEIAQGRLESLLNYQTMITDLTG------LPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred CCHHHHHHHHhChHHH-hhcCCCchHHHHHHHHHHHHHHHHHHHHhC------CChhhEeecCChHHHHHHHHHHHhccc
Confidence 3667768777654421 123444432 33 2466777777765 789999999999999998887763244
Q ss_pred C--CEEEEc---cCcee-----c--CCCcccChH--HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHH
Q 041151 155 G--DGVVLL---FHTTW-----K--RQQIGVLII--NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRF 220 (463)
Q Consensus 155 g--d~Vlvp---~g~~~-----~--~~~~~~d~~--~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~ 220 (463)
| ++|+++ +.... . ..+..+..+ +... ...+ .+-.+++.+|++ +|.+.+ +++|+++
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-~~~~------~v~~vlvq~P~~-~G~v~d---v~~I~~~ 258 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-YSSG------DVCGVLVQYPAT-DGEVLD---YAEFVKN 258 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-cccC------ceEEEEEecCCC-CeEEcC---HHHHHHH
Confidence 4 789997 11111 1 111111110 1100 0011 344445556665 899966 8888889
Q ss_pred hhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCC---CCceeEEEEecCCChhHHH
Q 041151 221 CYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGE---CGQRGGYFEMTNIPPKTVD 297 (463)
Q Consensus 221 a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~---~G~R~G~~~~~~~~~~~~~ 297 (463)
|+++|+++++ -+...... ...+... + +-.|+++|..|+. +. .|=+.|++++ .+++.+
T Consensus 259 ah~~GaL~iV-aad~lal~----~l~~pge----~-------GADi~vgsgqKwg-~P~G~GGP~aGflav---r~~~~r 318 (993)
T PLN02414 259 AHANGVKVVM-ATDLLALT----MLKPPGE----W-------GADIVVGSAQRFG-VPMGYGGPHAAFLAT---SQEYKR 318 (993)
T ss_pred HHHcCCEEEE-EECHHHhc----CCCCHhh----c-------cCcEEEECCCccc-cCCCCCCCCeeEEEE---CHHHHh
Confidence 9999999999 44332111 1112222 1 2247889999964 22 2334899986 555544
Q ss_pred HHH-hhhhh------------------------cccCChHHHHHHHHhcCCCCCCCchHHHH-HHH-HHHHHHHHHHHHH
Q 041151 298 EIY-KIASI------------------------ALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRE-SKGILESLRRRAR 350 (463)
Q Consensus 298 ~l~-~~~~~------------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 350 (463)
.+- .+-+. ..+.+.....++.+.+. ..|..+ ..+ +++++++..++..
T Consensus 319 ~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la------~~y~~~~g~~Gl~~Ia~ri~~la~ 392 (993)
T PLN02414 319 LMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMA------AMYAVYHGPEGLKTIAQRVHGLAG 392 (993)
T ss_pred hCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHH------HHHHHHhccccHHHHHHHHHHHHH
Confidence 331 00000 01122212222222221 111111 111 4567778888888
Q ss_pred HHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec
Q 041151 351 MMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL 430 (463)
Q Consensus 351 ~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~ 430 (463)
++.+.|... |+++..+ .+|-.+.++++ +..+ +.+.|.++||.++.-. .+.+|+|+.
T Consensus 393 ~l~~~L~~~-G~~~~~~--~~f~~vt~~~~-------------~~~~-v~~~L~~~gI~l~~~~-------~~~lrvs~~ 448 (993)
T PLN02414 393 VFAAGLKKL-GFQVQSL--PFFDTVKVKCS-------------DADA-IADAAAKVGINLRVVD-------ANTVTVSFD 448 (993)
T ss_pred HHHHHHhhc-CCccCCC--CCcCeEEEecC-------------CHHH-HHHHHHHCCCeeEEec-------CCeEEEEee
Confidence 999999875 7776543 33333223432 1333 4556778899776422 126999999
Q ss_pred --CCcCcHHHHHHHHHH
Q 041151 431 --PAEEDMPAIMESFKK 445 (463)
Q Consensus 431 --~~~e~i~~~~~~l~~ 445 (463)
++++||+.+++.|+.
T Consensus 449 e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 449 ETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ccCCHHHHHHHHHHHcc
Confidence 899999999999963
No 367
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.99 E-value=1e-09 Score=94.57 Aligned_cols=59 Identities=25% Similarity=0.527 Sum_probs=55.6
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcC--CCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc
Q 041151 102 AYSDSRGIPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL 161 (463)
Q Consensus 102 ~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp 161 (463)
.|++..|.++||+++|+|+++++| +++++++|++|+|+++++..++.+++ +|||.|++|
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp 147 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-DPGDAFLVP 147 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-CCCCEEEEe
Confidence 488899999999999999999888 67899999999999999999999998 999999997
No 368
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.98 E-value=2.6e-07 Score=100.05 Aligned_cols=215 Identities=12% Similarity=0.052 Sum_probs=123.8
Q ss_pred ceeEEEEEC-CCCCCccCC-CHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEe
Q 041151 192 TVRAMVIIN-PGNPTGQCL-SEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFH 269 (463)
Q Consensus 192 ~~~~i~l~~-p~NPtG~~~-s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (463)
++.+|++.- .+.--|.+. +..-+++|.++|++||+++|.||++..|.-.+ .+.+. ..+|+ .. =+-
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG-----~~fa~-e~~gv--~P-----DIi 650 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG-----VESAW-ELLGC--KP-----DIA 650 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc-----chhhH-HhcCC--CC-----CEE
Confidence 567776664 245557654 67789999999999999999999998863211 11111 12211 11 125
Q ss_pred cCCcccCCCCC-ceeEEEEecCCChhHHHHHHh------h-hhhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHH
Q 041151 270 TVSKGYWGECG-QRGGYFEMTNIPPKTVDEIYK------I-ASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGI 341 (463)
Q Consensus 270 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~------~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (463)
+++|.+ + .| +.+|.++ .++++.+.+.. + ...+++.++++..++.+.|+-.. .+..+. .+
T Consensus 651 ~~gKgL-t-gG~~Plaa~l---~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~-~~~~~~-------~l 717 (817)
T PLN02974 651 CYAKLL-T-GGLVPLAATL---ATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK-DPSTNP-------NL 717 (817)
T ss_pred eecccc-c-CCCCccEEEE---EcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH-cccHHH-------HH
Confidence 689998 4 68 5899998 48899888852 1 23578888999888887764211 001111 11
Q ss_pred HHHHHHHHH----HHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCC-ChHHHHHHHHH-hcCeEeeCCCC
Q 041151 342 LESLRRRAR----MMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKV-PDVFYCLRLLE-ATGISTVPGSG 415 (463)
Q Consensus 342 ~~~~~~~~~----~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~-~~gI~v~pg~~ 415 (463)
.+.-.+..+ .+.+.|.++|.+.-+...| +++-+.+.-+.. + .++. .....+...+. ++||+++|.
T Consensus 718 ~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~G-l~~~iel~~~~~-----~-~~~~~~~a~~v~~~~~~~~Gl~~r~~-- 788 (817)
T PLN02974 718 IPPGSRLRELWDEELVRAISSLPNVERVVSLG-TVLALELDAEGS-----G-SGYSSLYARSVVRRLRREDGIYARPL-- 788 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEEeee-eEEEEEEecCCc-----c-cccchHHHHHHHHHHHHhCCEEEEec--
Confidence 122222222 2323344455444344444 333333321110 0 0010 01122334455 899999883
Q ss_pred CCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHH
Q 041151 416 FGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFN 447 (463)
Q Consensus 416 f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l 447 (463)
+ +.+|+... .+++++++++++|.+.+
T Consensus 789 -G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 -G-----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -C-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 2 26888766 78899999999998765
No 369
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.98 E-value=2.5e-07 Score=92.31 Aligned_cols=261 Identities=14% Similarity=0.100 Sum_probs=154.9
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCC-----CCCcEEEcCCcHHHHHHHHHHHh-----
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPS-----DPELIFLTDGASKGVMQTLNCVI----- 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~-----~~~~i~~t~G~~~al~~~~~~l~----- 151 (463)
+..++..+....-+. +...|.......++..++.+|+.+..|.+- ....=++|+|+++++..++.+.-
T Consensus 52 ~~~i~~~~l~~~~n~--n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~ 129 (373)
T PF00282_consen 52 PASILADLLASALNQ--NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALP 129 (373)
T ss_dssp HHHHHHHHHHHHHT---BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcc--cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhh
Confidence 555555554433331 333443333467899999999999989872 12356788999999987775541
Q ss_pred --cCC-----CC-EEEEc-------------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc
Q 041151 152 --RGE-----GD-GVVLL-------------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTG 206 (463)
Q Consensus 152 --~~~-----gd-~Vlvp-------------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG 206 (463)
... +. .|+++ .|..+ .+.++.+|+ ++|++++.+...+|..+=+|+.+.....||
T Consensus 130 ~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~-~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 130 RSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDI-EALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-H-HHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhhcccccccccccccccccccHHHHhcceeeeEEEEecCCcchhhhH-HHhhhhhcccccccccceeeeccCCCcccc
Confidence 011 23 34444 44444 445688999 999999998766653344566668888899
Q ss_pred cCCCHHHHHHHHHHhhhCCeEEEeccccccccc-CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEE
Q 041151 207 QCLSEANLREILRFCYQENLVLLGDEVYQQNIY-QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGY 285 (463)
Q Consensus 207 ~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~ 285 (463)
.+ +++++|+++|+++++|+-+|.+|....+ .+.... -... .+.. + =+..+++|++ + .-..+|+
T Consensus 209 a~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~-~~~g-i~~a-----d----Sit~d~HK~l-~-~P~~~~~ 272 (373)
T PF00282_consen 209 AI---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH-LLFG-IERA-----D----SITIDPHKWL-G-VPYGCGV 272 (373)
T ss_dssp BB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG-GGTT-GGGE-----S----EEEEETTTTT-S--SSS-EE
T ss_pred cc---cCHHHHhhhccccceeeeecccccccccccccccc-cccc-cccc-----c----ccccchhhhh-c-CCcccee
Confidence 98 6688899999999999999999987332 111111 1111 1111 1 2457899987 4 4567999
Q ss_pred EEecCCChhHHHHHHhhh------------------hhcccCChHHHHHHHHhcCCCCCCCchHHHH-HHHHHHHHHHHH
Q 041151 286 FEMTNIPPKTVDEIYKIA------------------SIALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRESKGILESLR 346 (463)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (463)
+++ .++.......... ..+...++ ...++..++. +..+ .+-..++.++..
T Consensus 273 ~l~--r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~--------l~~~G~~G~~~~i~~~~ 341 (373)
T PF00282_consen 273 LLV--RDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWAT--------LKSLGREGYRERIRRCI 341 (373)
T ss_dssp EEE--SSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHH--------HHHHHHHHHHHHHHHHH
T ss_pred EEe--ecccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHH--------HHhcCHHHHHHHHHHHH
Confidence 987 5555443321110 01233344 3344444321 1111 222555666777
Q ss_pred HHHHHHHHHhhcCCCccccc-CCceeE
Q 041151 347 RRARMMTDGFNSCRNVVCNF-TEGAMY 372 (463)
Q Consensus 347 ~~~~~l~~~L~~~pg~~~~~-~~g~~~ 372 (463)
+..+++.+.|++.+++++.. |.-+..
T Consensus 342 ~~a~~l~~~l~~~~~~el~~~~~~~~v 368 (373)
T PF00282_consen 342 ELARYLADRLRKDPRFELVNEPDLNIV 368 (373)
T ss_dssp HHHHHHHHHHHTSTTEEESSTTSSSEE
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCceEE
Confidence 78899999999988888765 444433
No 370
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.96 E-value=3.4e-07 Score=100.83 Aligned_cols=257 Identities=12% Similarity=0.140 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC--CCEEEEc-----------------cCcee---cC
Q 041151 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE--GDGVVLL-----------------FHTTW---KR 168 (463)
Q Consensus 111 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~--gd~Vlvp-----------------~g~~~---~~ 168 (463)
++++.++++.+ +++.++-+..+++.+.+.++.++-..+ +++|+++ .|.++ +.
T Consensus 125 ~~Qt~la~LtG------~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~ 198 (954)
T PRK05367 125 NFQTMVADLTG------LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA 198 (954)
T ss_pred HHHHHHHHHHC------CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC
Confidence 44555555554 678899999999999998888763144 4899997 34443 11
Q ss_pred CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccch
Q 041151 169 QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSS 248 (463)
Q Consensus 169 ~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~ 248 (463)
.. |. + .+ ++-++++.+|+ -+|.+.+ +++|+++|+++|+++++|-....+.. .. +.
T Consensus 199 ~~---d~-~------~~------~~~~vlvq~p~-~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~--l~---~p 253 (954)
T PRK05367 199 AK---AL-D------HD------DVFGVLLQYPG-TSGEVRD---YTALIAAAHARGALVAVAADLLALTL--LT---PP 253 (954)
T ss_pred cc---CC-C------cc------cEEEEEEecCC-CCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC--CC---Ch
Confidence 11 22 1 11 46666666775 5899975 88899999999999999875533222 11 12
Q ss_pred HHHHHhcCCCCCCCceEEEEecCCcc-----cCCCCCceeEEEEecCCChhHHHHHHhh-hhh-----------------
Q 041151 249 KKVLMDMGLPFSKEVQLVSFHTVSKG-----YWGECGQRGGYFEMTNIPPKTVDEIYKI-ASI----------------- 305 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~i~~~S~SK~-----~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~----------------- 305 (463)
.+ + + -.|+++|..|+ | |-|| .|++.+ .+++.+.+.-. -..
T Consensus 254 ge----~----G---aDi~vgs~qkfg~P~g~-GGP~--aGflav---r~~~~r~lpgrivG~s~d~~g~~~~~lalqtR 316 (954)
T PRK05367 254 GE----M----G---ADIAVGSAQRFGVPMGF-GGPH--AAYFAV---RDAYKRSMPGRIVGVSVDAAGNPALRLALQTR 316 (954)
T ss_pred hh----c----C---CCEEEeeCcccCCCCCC-CCCC--EEEEEE---CHHHHhhCCCCeeeeecccCCCcccccccccc
Confidence 11 2 2 23888999997 5 5566 899986 56665554210 000
Q ss_pred -------cccCChHHHHHHHHhcCCCCCCCchHHHHH-HH-HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeee
Q 041151 306 -------ALSPNVPAQIFMGLMVNPLKPGDISYEQFV-RE-SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQ 376 (463)
Q Consensus 306 -------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~ 376 (463)
..+.+.....++.+.+. ..|-.+. .+ +++++++...+..++.+.|... |+++..+ .+|-.+.
T Consensus 317 eqhiRrekaTsNict~qaL~a~~a------~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~~f~~~~ 387 (954)
T PRK05367 317 EQHIRREKATSNICTAQVLLAVMA------SMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHD--SFFDTLT 387 (954)
T ss_pred cccccccccccccchHHHHHHHHH------HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC--CCCCeEE
Confidence 00111111111111111 1121222 22 5667788888889999999774 8776543 2333322
Q ss_pred ccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 377 IRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
++.+. +..+ +.+.|.++||.+.. .. ...+|+|+. ++++||+.+++.|.
T Consensus 388 ~~~~~------------~~~~-i~~~l~~~gi~~~~---~~----~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 388 VEVGG------------DAAA-VLARALAAGINLRR---VD----DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EeCCC------------CHHH-HHHHHHHCCceecc---cc----CCEEEEEecccCCHHHHHHHHHHHc
Confidence 33321 1334 45567788998833 11 236999999 88999999999997
No 371
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.95 E-value=2.3e-07 Score=86.72 Aligned_cols=270 Identities=15% Similarity=0.152 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEEccCcee-----------------cCCCcc
Q 041151 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVLLFHTTW-----------------KRQQIG 172 (463)
Q Consensus 111 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlvp~g~~~-----------------~~~~~~ 172 (463)
.|-..+|-.++ ..+++++++++++-.++.++.+.++ .+|+.|+++.+... ......
T Consensus 80 ~lgdklApLiG------A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~ 153 (407)
T COG3844 80 RLGDKLAPLIG------ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGV 153 (407)
T ss_pred HHHHHhhhhhc------CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceee
Confidence 34455565655 5678999999999999988888764 46899999811111 123344
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
+.+ .++++.+++ ++.+|++++.|.-||+.+. +.+|.+++++++++++.|-+|+.... +..+.
T Consensus 154 ~~P-~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav-----p~~Lh--- 215 (407)
T COG3844 154 IAP-RALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV-----PVDLH--- 215 (407)
T ss_pred eCh-HHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc-----ceeec---
Confidence 566 899999998 8999999999999999988 67777788899999999999987544 12221
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhhc------------------------cc
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIA------------------------LS 308 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~------------------------~~ 308 (463)
..+-.+-|++.-|.+.|-||--.|.-+ .++..+......+.. .+
T Consensus 216 --------~~gaDfaigcsyKYLNgGPGapa~l~v----~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt 283 (407)
T COG3844 216 --------AAGADFAIGCSYKYLNGGPGAPAGLFV----APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGT 283 (407)
T ss_pred --------ccCCCeeeeeeceeccCCCCCceeEEe----ccccccccccccccccCCCCcchhhhccCcCccccceeeCC
Confidence 112236789999999877887544444 344444332222111 12
Q ss_pred CChHHHHHHHHhcCCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHhhc-CC--CcccccC-----CceeEEeeeccC
Q 041151 309 PNVPAQIFMGLMVNPLKPGDISYEQFVRE-SKGILESLRRRARMMTDGFNS-CR--NVVCNFT-----EGAMYSFPQIRL 379 (463)
Q Consensus 309 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~-~p--g~~~~~~-----~g~~~~~~~~~~ 379 (463)
++.++..++...| +-+.+. +.++|++=-...+++.+.++. ++ ++.+..| .|+-..+ ..
T Consensus 284 ~~V~s~aal~~aL----------Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~---~h 350 (407)
T COG3844 284 QPVLSLAALEGAL----------DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSL---YH 350 (407)
T ss_pred cchhhhHHHhhhh----------hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeE---ec
Confidence 2222222222222 122221 455666666667778877765 34 5555555 2444333 33
Q ss_pred ChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 041151 380 PPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~~~~~~l~~~l~~~ 450 (463)
|. ...+.+.|.++||.. .|..+ ..+|+.+. .+.+|+=.+++.|.+++.+.
T Consensus 351 p~--------------~~~V~qaLi~rGVig----D~R~P---~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 351 PH--------------GYQVMQALIDRGVIG----DFREP---DVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred Cc--------------HHHHHHHHHHcCccc----cccCC---CeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 42 334667788999953 34432 37999999 78899999999999998765
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.89 E-value=1.5e-06 Score=82.33 Aligned_cols=309 Identities=16% Similarity=0.180 Sum_probs=194.0
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCC-----EEEEc-------------
Q 041151 100 LGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGD-----GVVLL------------- 161 (463)
Q Consensus 100 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd-----~Vlvp------------- 161 (463)
-..|..+.++..|++++.+.++ -+-++.|.-+..|=..++..++ ++|+ +..++
T Consensus 72 DEAYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~i-k~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILI-KKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred chhhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHh-hhccccCCccccccccceecchhHHHH
Confidence 3578888999999999999885 2556667766666666666666 4443 33333
Q ss_pred -cCcee--------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 162 -FHTTW--------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 162 -~g~~~--------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
+|+.+ ......+|+ +.|++.+.+...+ ++-.|+++ ..|.-.|+..|.+.+++..++|++|+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~-~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDL-EKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCH-HHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 45444 123456899 9999999986433 46666666 66777889999999999999999999
Q ss_pred eEEEeccccc-cccc-----CCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh---HH
Q 041151 226 LVLLGDEVYQ-QNIY-----QDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK---TV 296 (463)
Q Consensus 226 ~~vi~Deay~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~---~~ 296 (463)
+.++.|.+=. +-.| ..+....|+.++..++ ..+.. -...|.-|. |+..+ .|++++ .++. +.
T Consensus 220 ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm----~sYaD-~~~mS~KKD--~lvnm-GGfl~~--~D~~~fDvy 289 (471)
T COG3033 220 IPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREM----YSYAD-GCTMSAKKD--GLVNM-GGFLCF--KDDSFFDVY 289 (471)
T ss_pred CcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHH----Hhhhh-hheeecccc--ceecc-ccEEEe--cCccHHHHH
Confidence 9999996521 1111 1223445777776665 32211 233555564 55554 577777 3443 44
Q ss_pred HHHHhhh------hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCce
Q 041151 297 DEIYKIA------SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGA 370 (463)
Q Consensus 297 ~~l~~~~------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~ 370 (463)
...+... ....+.+.-...+++.-|.... -.+|+++ + -++.++|.+.|.+. |+.+..|.||
T Consensus 290 ~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~-----~~~yl~~------R-v~Qv~YL~~~l~~~-GVpi~~paGG 356 (471)
T COG3033 290 EECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGV-----NFDYLAH------R-VAQVQYLADGLEEA-GVPIVQPAGG 356 (471)
T ss_pred HHHHhheEeeccccccCcccchhHHHHHHHHHHhc-----CcHHHHH------H-HHHHHHHHHHHHhc-CCeeEecCCC
Confidence 4444432 1233444445555555553211 1122222 2 23456889999998 9989999999
Q ss_pred eEEeeecc--CChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC--CCC--------CCcEEEEEec---CCcCc
Q 041151 371 MYSFPQIR--LPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG--QKE--------GIFHLRTTIL---PAEED 435 (463)
Q Consensus 371 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~--~~~--------~~~~lRis~~---~~~e~ 435 (463)
--++++.. +|. +.+.++ ....++.++..+.||-..--..|. ..+ .-..+|+++. =+.+.
T Consensus 357 Havfvda~~~lph--ip~eqF----paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~H 430 (471)
T COG3033 357 HAVFVDAGKFLPH--IPAEQF----PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTH 430 (471)
T ss_pred ceEEeehhhhcCC--CChhhC----cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhH
Confidence 88887653 231 111111 245667788999999887644442 211 1247999999 36678
Q ss_pred HHHHHHHHHHHHHH
Q 041151 436 MPAIMESFKKFNDE 449 (463)
Q Consensus 436 i~~~~~~l~~~l~~ 449 (463)
++..++.++++.++
T Consensus 431 mD~V~~a~~~l~e~ 444 (471)
T COG3033 431 MDFVIEAFKALKEN 444 (471)
T ss_pred HHHHHHHHHHHHhc
Confidence 88888888776554
No 373
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.88 E-value=4.1e-07 Score=86.94 Aligned_cols=146 Identities=14% Similarity=0.205 Sum_probs=100.6
Q ss_pred CCCcEEE---cCCcHHHHHHHHHHHhcCCCCEEEEc------------------------cCcee----cCCCcccChHH
Q 041151 129 DPELIFL---TDGASKGVMQTLNCVIRGEGDGVVLL------------------------FHTTW----KRQQIGVLIIN 177 (463)
Q Consensus 129 ~~~~i~~---t~G~~~al~~~~~~l~~~~gd~Vlvp------------------------~g~~~----~~~~~~~d~~~ 177 (463)
..|.-+| ..++|+||..++..++ .|||+.+.- +|+.. -.++..+|. +
T Consensus 68 gaE~ALVRpq~vSGTHAi~~~Lfg~L-rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~-~ 145 (403)
T PF06838_consen 68 GAEDALVRPQFVSGTHAIALALFGVL-RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDW-E 145 (403)
T ss_dssp T-SEEEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-H-H
T ss_pred CchhhhhcccccchHHHHHHHHHhcC-CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCH-H
Confidence 3554444 2356999999999998 899998873 44444 455688999 9
Q ss_pred HHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhC--CeEEEecccccccccCCCCCccchHHHHHh
Q 041151 178 DLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQE--NLVLLGDEVYQQNIYQDERPFVSSKKVLMD 254 (463)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~--~~~vi~Deay~~~~~~~~~~~~~~~~~~~~ 254 (463)
.+++++++ ++|+|+|. +-..-+=..++.+++++++++.++. ++++++|..|.+|.- ...+...
T Consensus 146 ~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE--~~EP~~v------ 211 (403)
T PF06838_consen 146 AIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE--TQEPTEV------ 211 (403)
T ss_dssp HHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS--SS-GGGG------
T ss_pred HHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc--ccCcccc------
Confidence 99999997 89999998 7666677788999999999999875 899999999999754 2333222
Q ss_pred cCCCCCCCceEEEEecCCcccCCCCCc--eeEEEEecCCChhHHHHHHhhh
Q 041151 255 MGLPFSKEVQLVSFHTVSKGYWGECGQ--RGGYFEMTNIPPKTVDEIYKIA 303 (463)
Q Consensus 255 ~~~~~~~~~~~i~~~S~SK~~~g~~G~--R~G~~~~~~~~~~~~~~l~~~~ 303 (463)
.. .++.+|+=|... .|+ -.||++ +.++++++.....
T Consensus 212 -----GA---Dl~aGSLIKNpG--GgiAptGGYIa---Gr~~lVe~~a~RL 249 (403)
T PF06838_consen 212 -----GA---DLMAGSLIKNPG--GGIAPTGGYIA---GRKDLVERAAYRL 249 (403)
T ss_dssp -----T----SEEEEETTSGGG--TTT-SS-EEEE---ESHHHHHHHHHHH
T ss_pred -----ch---hheeccceeCCC--CCccCcCCEEe---chHHHHHHHHhhh
Confidence 22 278999999873 343 379999 8999999886554
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=6e-06 Score=78.50 Aligned_cols=311 Identities=11% Similarity=0.081 Sum_probs=180.2
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCC--CCCHHHHHHHHHHHHH----hcCCCCCCC----cEEEcCCcHHHHHHHHHHHh
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDS--RGIPGVRKEVAEFIER----RDGYPSDPE----LIFLTDGASKGVMQTLNCVI 151 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~----~~g~~~~~~----~i~~t~G~~~al~~~~~~l~ 151 (463)
...+++++-..+.+. ...+|+.. .|-.+..+.+..+..+ -++ ++|+ +|..-+| +.|...+..+++
T Consensus 53 s~aVmeAlGS~ltNK--YSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQp~SG-SPANfavYtall 127 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNK--YSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQPYSG-SPANFAVYTALL 127 (477)
T ss_pred HHHHHHHHhHHhhcc--cccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeeccCCC-CchhhHHHhhhc
Confidence 667788877766652 23344331 1223444444333222 234 4444 5555556 568999999998
Q ss_pred cCCCCEEEE---ccCcee-------------------------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCC
Q 041151 152 RGEGDGVVL---LFHTTW-------------------------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGN 203 (463)
Q Consensus 152 ~~~gd~Vlv---p~g~~~-------------------------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~N 203 (463)
+|++.|.- |.|+.+ .....-+|. |.||+..... ++|+|+--.-..
T Consensus 128 -~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDY-D~Le~~A~~f-----rPk~iiaG~SaY 200 (477)
T KOG2467|consen 128 -KPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDY-DKLEKTATLF-----RPKLIIAGTSAY 200 (477)
T ss_pred -CCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceeh-HHHHHHHHhc-----CCcEEEeccccc
Confidence 89998765 333222 334566899 9999988876 899876332222
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEecccccc-cccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCce
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLGDEVYQQ-NIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR 282 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R 282 (463)
+ ..+.- .++-++|.+.+.+++.|.+|-. ++- .+. .++.... ..||..|.+|++ -|-|
T Consensus 201 ~--R~~DY---aR~R~Iad~~gA~Lm~DMAHISgLVA-A~v-ipsPFey------------~DiVTTTTHKsL---RGPR 258 (477)
T KOG2467|consen 201 S--RLIDY---ARFRKIADKVGAYLMADMAHISGLVA-AGV-IPSPFEY------------CDIVTTTTHKSL---RGPR 258 (477)
T ss_pred h--hhccH---HHHHHHHHhcCceeehhhhhHHHHHh-ccc-CCCcccc------------cceeeccccccc---cCCc
Confidence 2 34444 4444555588999999999953 332 111 2232221 248889999987 5889
Q ss_pred eEEEEecCCChhH------------HHHHHh-hhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 041151 283 GGYFEMTNIPPKT------------VDEIYK-IAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRR 348 (463)
Q Consensus 283 ~G~~~~~~~~~~~------------~~~l~~-~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (463)
.|.+....+.+.. -+++.. +.. ...++......+++.+|+... ...|..|. .+..+|
T Consensus 259 g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~--tpefk~Yq-------~qV~~N 329 (477)
T KOG2467|consen 259 GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKEYQ-------KQVLKN 329 (477)
T ss_pred ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC--CHHHHHHH-------HHHHHH
Confidence 9999875432221 122221 112 234444444555555665432 23444443 457888
Q ss_pred HHHHHHHhhcCCCcccccC-CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCC--CCcEE
Q 041151 349 ARMMTDGFNSCRNVVCNFT-EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKE--GIFHL 425 (463)
Q Consensus 349 ~~~l~~~L~~~pg~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~--~~~~l 425 (463)
.+.|.+.|.+. |.+++.. ..+-.++++++ |.+. +...++..|+.-+|.+.--..+|... ..+.+
T Consensus 330 akala~~l~~~-Gy~lvtgGTDnHlvLvDLr-~~G~-----------dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGi 396 (477)
T KOG2467|consen 330 AKALASALISR-GYKLVTGGTDNHLVLVDLR-PKGV-----------DGARVEKVLELCHIALNKNTVPGDKSALSPGGI 396 (477)
T ss_pred HHHHHHHHHHc-CceEecCCccceEEEEecc-ccCC-----------chHHHHHHHHHhhhhhcCCcCCCCccccCCCce
Confidence 99999999988 8887643 33445555554 2221 44557788888888886444444311 12369
Q ss_pred EEEec--C----CcCcHHHHHHHHHHHHH
Q 041151 426 RTTIL--P----AEEDMPAIMESFKKFND 448 (463)
Q Consensus 426 Ris~~--~----~~e~i~~~~~~l~~~l~ 448 (463)
||... + .++|+++..+-|..+++
T Consensus 397 RiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 397 RIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 99876 3 34566665555554443
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.64 E-value=6.5e-06 Score=80.34 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=134.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHH-HHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRK-EVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~-~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
.+++++++......+. .. .|.-..|...-|- .++..+. +. ..++.+.++|+.+.++.+++.++. . +.+|++
T Consensus 40 ~~e~iea~~~~~~~~v-~L-e~~l~~g~~~~R~~~~~~~~~---~~-~~aea~~ivnnn~aAVll~~~al~-~-~~EvVi 111 (395)
T COG1921 40 SPEAIEAMKEAMRAPV-EL-ETDLKTGKRGARLTELAELLC---GL-TGAEAAAIVNNNAAAVLLTLNALA-E-GKEVVV 111 (395)
T ss_pred CHHHHHHHHHHhcccc-ee-eeecccchhhHHHHHHHHHHh---cc-cchhheeeECCcHHHHHHHHhhhc-c-CCeEEE
Confidence 7889999988777642 33 4444333322221 3333332 22 346789999999999999999996 4 555666
Q ss_pred c------------------cCcee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHH
Q 041151 161 L------------------FHTTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILR 219 (463)
Q Consensus 161 p------------------~g~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~ 219 (463)
. .|+++ ......... ..++.++.+ ++++++-. ++|.+--..++ .+++++
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~-~d~~~AIne------~ta~llkV~s~~~~f~~~l~---~~~l~~ 181 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHL-KDYELAINE------NTALLLKVHSSNYGFTGMLS---EEELVE 181 (395)
T ss_pred EccccccCCCCChhHHHHHcCCEEEEecccCcCCH-HHHHHHhcc------CCeeEEEEeecccccccccc---HHHHHH
Confidence 5 44444 233333566 889999998 88888766 44443223344 566777
Q ss_pred HhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHH
Q 041151 220 FCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 220 ~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 299 (463)
+|+++++.+|+|.+-....- .-+.+...+ . .+-.+++.|-.|.| | |-+.|.++ |.+++++++
T Consensus 182 ia~~~~lpvivD~aSg~~v~----~e~~l~~~l-a-------~GaDLV~~SgdKll-g--GPqaGii~---GkKelI~~l 243 (395)
T COG1921 182 IAHEKGLPVIVDLASGALVD----KEPDLREAL-A-------LGADLVSFSGDKLL-G--GPQAGIIV---GKKELIEKL 243 (395)
T ss_pred HHHHcCCCEEEecCCccccc----cccchhHHH-h-------cCCCEEEEecchhc-C--CCccceEe---chHHHHHHH
Confidence 88899999999998765432 112232221 1 12248889999988 3 77789998 899999999
Q ss_pred Hhhhh-hcccCChHHHHHHHHhcC
Q 041151 300 YKIAS-IALSPNVPAQIFMGLMVN 322 (463)
Q Consensus 300 ~~~~~-~~~~~~~~~q~~~~~~l~ 322 (463)
++..- ..+.+......++.++|+
T Consensus 244 q~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 244 QSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred HhhhhhhhhhcCcHhHHHHHHHHH
Confidence 88763 566777777777766663
No 376
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.56 E-value=7.5e-08 Score=92.88 Aligned_cols=248 Identities=16% Similarity=0.148 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHH-HHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVR-KEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
++++++++.+....+ ....|.-..|-.--| ..+.+.+.+. +.+|.-+++|+...|+.+++.++. +|.+|++
T Consensus 19 ~~~a~~a~~~~a~~Y--~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la--~~~EvIv 90 (367)
T PF03841_consen 19 SEEAIEAVAEVASGY--SNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA--KGKEVIV 90 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccc--cccccccccccccccccccccccccc----cccccccccccccccccccccccc--ccccccc
Confidence 778888888776653 223443322221111 1222232221 456788888888899999999996 6777887
Q ss_pred c------cC-------------cee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCC-CHHHHHHHH
Q 041151 161 L------FH-------------TTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCL-SEANLREIL 218 (463)
Q Consensus 161 p------~g-------------~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~-s~~~l~~l~ 218 (463)
. .| +++ ......-.+ +++++++++ +|.+|+..+++|-.-.-+ ..-.+++++
T Consensus 91 sRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~-~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~ 163 (367)
T PF03841_consen 91 SRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHL-SDYEKAITE------NTAALLKVHTSNFRIQGFTGEVSLEELA 163 (367)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccccc------cccccccccccccccccccccccHHHHH
Confidence 6 22 222 111222345 778899988 899998888888743211 223588899
Q ss_pred HHhhhCCeEEEecccccccc----cCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChh
Q 041151 219 RFCYQENLVLLGDEVYQQNI----YQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK 294 (463)
Q Consensus 219 ~~a~~~~~~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~ 294 (463)
+++++|++++|+|-.-..+. |+ -..-+++... -..+-.+++.|=.|.+ |-|. .|.++ |.++
T Consensus 164 ~la~~~~lp~i~DlgsG~l~dl~~~g-l~~Ep~v~~~--------~~~GaDlV~fSGdKlL-GGPQ--aGiI~---Gkk~ 228 (367)
T PF03841_consen 164 ELAKEHGLPVIVDLGSGLLVDLSPYG-LPDEPTVQEY--------LAAGADLVTFSGDKLL-GGPQ--AGIIV---GKKE 228 (367)
T ss_dssp HHHHHHT--EEEE-TTHHHHHHHTT-----------C--------CCCT-SEEEEETTSSS-SS-S---EEEE---EEHH
T ss_pred HHHhhcCCcEEEECCCCCCcCccccc-CccccHHHHH--------hhcCCCEEEEECCCcC-CCCC--eEEEE---eCHH
Confidence 99999999999997763321 10 0111223222 2223348999999998 5444 79998 8999
Q ss_pred HHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 041151 295 TVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQ--FVRESKGILESLRRRARMMTDGFNSC 359 (463)
Q Consensus 295 ~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 359 (463)
+++++++..- ..+.+......++.+.|+.-...+...++ .++.+....+.++++.+.|...|...
T Consensus 229 lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 229 LIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred HHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 9999987542 45667777776666655310000000000 11113334555666666666666553
No 377
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.45 E-value=8.6e-05 Score=68.94 Aligned_cols=320 Identities=11% Similarity=0.078 Sum_probs=177.5
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCC--CcEEEcCCcHHHHHHHHHHHh--cCCCCE
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQTLNCVI--RGEGDG 157 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~--~~~gd~ 157 (463)
.+.+++++...+.....+ ..-|...+.++-++... .-| +-++++|++++|..++++.-- ++-.|.
T Consensus 63 hp~VV~A~~kQmat~~tN---------~RFlhd~lv~cA~~l~s--tlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDv 131 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATISTN---------NRFLHDELVQCARTLTS--TLPELSVCFFVNSGSEANDLALRLARNFTKHQDV 131 (452)
T ss_pred CHHHHHHHHHHHhHhccc---------chhhHHHHHHHHHHHhh--cCCCceEEEEecCCchhhHHHHHHHHhhcccCce
Confidence 778888886655542111 12233333333221111 223 367889999999999988642 145576
Q ss_pred EEEc--------------------------------------cCcee-----cCCC-cccChHHHHHHHHHHHHhcCCce
Q 041151 158 VVLL--------------------------------------FHTTW-----KRQQ-IGVLIINDLQQSVAQARSKGITV 193 (463)
Q Consensus 158 Vlvp--------------------------------------~g~~~-----~~~~-~~~d~~~~l~~~l~~~~~~~~~~ 193 (463)
|.+. ++++. +..+ ...-. +.+++.+++...++..+
T Consensus 132 ItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Ya-d~vk~I~~d~~~~g~gv 210 (452)
T KOG1403|consen 132 ITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYA-DPVKEICQDQLAKGQGV 210 (452)
T ss_pred EEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhh-hHHHHHHHHHHhcCCcH
Confidence 6665 11221 1111 11223 56777777766655555
Q ss_pred eEEEEECCCCCCccCCCHHH-HHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 194 RAMVIINPGNPTGQCLSEAN-LREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 194 ~~i~l~~p~NPtG~~~s~~~-l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
.+.+-.+-.+=-|.++++.. .+++++..+.++-..|.||+.-.|.- -+..+.++..+ ++ +--|.++.
T Consensus 211 AAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR-vG~hyWafq~y--~f---------iPDIVtmg 278 (452)
T KOG1403|consen 211 AAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR-VGSHYWAFQTY--NF---------IPDIVTMG 278 (452)
T ss_pred HHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc-cchhhhhhhhh--cc---------ccchheec
Confidence 55544455666677777764 68888888889999999999877432 12222222211 11 12235788
Q ss_pred cccCCCCCceeEEEEecCCChhHHHHHHhhh--h-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 041151 273 KGYWGECGQRGGYFEMTNIPPKTVDEIYKIA--S-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRA 349 (463)
Q Consensus 273 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (463)
|.+ | .|..++.++ ..+++.+++..-. . .+++.++.+-++..+.|+- -+.+.+..+-++.-
T Consensus 279 Kpm-G-NGhPVa~Va---ttkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v------------~e~E~Lq~ha~~vG 341 (452)
T KOG1403|consen 279 KPM-G-NGHPVAAVA---TTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRV------------CEDENLQEHAQQVG 341 (452)
T ss_pred ccC-C-CCCeeeEEe---ccHHHHHHhccccceehhccCCCchhHHHHHHHHHH------------HhhhhHHHHHHHHH
Confidence 999 5 899999999 4899999997632 1 4788899988888887742 11223344444444
Q ss_pred HHHHHHhhcCC-CcccccC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHH-HHHHhcCeEeeCCCCCCCCCCCcEE
Q 041151 350 RMMTDGFNSCR-NVVCNFT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCL-RLLEATGISTVPGSGFGQKEGIFHL 425 (463)
Q Consensus 350 ~~l~~~L~~~p-g~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~~gI~v~pg~~f~~~~~~~~l 425 (463)
++|...|..+. ...++.. ..|+|+=+++- . |..++......+.++. ++-+.++|++..-. ++.+-+
T Consensus 342 ~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLV--k---D~~tRtP~tk~A~~~v~rlke~y~VLlsaDG-----Ph~Nil 411 (452)
T KOG1403|consen 342 EKLEVLLRRLKQKHECIGDVRGVGLFIGIDLV--K---DRKTRTPDTKEAHWVVNRLKELYRVLLSADG-----PHRNIL 411 (452)
T ss_pred HHHHHHHHHHhhhccceeccccceEEEeeeee--c---ccccCCCcHHHHHHHHHHHHHhhhEEEecCC-----CCCcee
Confidence 45555554431 2233322 23455544331 1 1112211111233333 33444568776521 344456
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 426 RTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 426 Ris~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.|-.. -++++.++.+..|.+++.-..+
T Consensus 412 KiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 412 KIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred ecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 66555 4667888888888777764433
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.33 E-value=0.00031 Score=76.78 Aligned_cols=251 Identities=9% Similarity=0.083 Sum_probs=140.0
Q ss_pred CCCCcEEEcCCcHHHHHHHHHHHh--cCCCCEEEEccCcee----------cCCCc---ccChHHHHHHHHHHHHhcCCc
Q 041151 128 SDPELIFLTDGASKGVMQTLNCVI--RGEGDGVVLLFHTTW----------KRQQI---GVLIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 128 ~~~~~i~~t~G~~~al~~~~~~l~--~~~gd~Vlvp~g~~~----------~~~~~---~~d~~~~l~~~l~~~~~~~~~ 192 (463)
.+..|.-+..+++.+.+.++.+.- ++++++|+++....+ ...++ .+|. +.|++.+ +
T Consensus 124 m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~-~~l~~~~--------~ 194 (939)
T TIGR00461 124 LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC-SDIKKAV--------D 194 (939)
T ss_pred CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH-HHHhhcC--------C
Confidence 555677777788877777766642 123478999722222 11111 1255 5554433 3
Q ss_pred eeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCC
Q 041151 193 VRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVS 272 (463)
Q Consensus 193 ~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 272 (463)
+.++++.+||. .|.+. ++++|++++++++.+++++.--..+.. ..+... + +. .|++++-
T Consensus 195 ~~~v~~q~Pn~-~G~ie---d~~~i~~~~h~~gal~~~~ad~~al~l-----l~~Pge----~----Ga---Di~vg~~- 253 (939)
T TIGR00461 195 VFGCLLQYPAT-DGSIL---DYKQLIDALHSHKSLVSVAADLMALTL-----LTPPGH----Y----GA---DIVLGSS- 253 (939)
T ss_pred EEEEEEECCCC-CeEEe---cHHHHHHHHHHcCCEEEEEechHHhCC-----cCCHHH----c----CC---cEEeeCC-
Confidence 56778889987 79885 588899999999999998543322211 112211 1 22 2454433
Q ss_pred cccCCC----CCceeEEEEecCCChhHHHHHH----------------------------hhhh-hcccCChHHHHHHHH
Q 041151 273 KGYWGE----CGQRGGYFEMTNIPPKTVDEIY----------------------------KIAS-IALSPNVPAQIFMGL 319 (463)
Q Consensus 273 K~~~g~----~G~R~G~~~~~~~~~~~~~~l~----------------------------~~~~-~~~~~~~~~q~~~~~ 319 (463)
|.| |+ .|--.|++.+ .+++.+.+- +.+. .+++++....+.++.
T Consensus 254 q~f-g~p~g~GGP~aG~~a~---~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~ 329 (939)
T TIGR00461 254 QRF-GVPMGYGGPHAAFFAV---KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVAS 329 (939)
T ss_pred Ccc-CCCCCCCCCceeeeee---cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHH
Confidence 334 33 1333677764 444443320 0000 011111111111111
Q ss_pred hcCCCCCCCchHHHH-HHH-HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHH
Q 041151 320 MVNPLKPGDISYEQF-VRE-SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVF 397 (463)
Q Consensus 320 ~l~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (463)
+ |..+ -.+ ++++.++...+..++.+.|.+. |+++..+ .||--+.++++.. +..+
T Consensus 330 ~----------Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~~~~v~~~~~-----------~~~~ 385 (939)
T TIGR00461 330 S----------YCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINK--TWFDTLTVKVGNG-----------ISSE 385 (939)
T ss_pred H----------HHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CccceEEEEeCCC-----------CHHH
Confidence 1 1111 122 5567777888888999999885 8887655 4554433444311 1233
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 398 YCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 398 ~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
+.+.+.++||.++.. ..+.+++|+. ++.+|++.+++.+.
T Consensus 386 -i~~~~~~~gi~l~~~-------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 386 -LLKAAEEFNINLRAV-------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -HHHHHHHCCCeeeec-------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 455677789997651 1236999999 88899999999995
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.32 E-value=9e-05 Score=72.45 Aligned_cols=288 Identities=13% Similarity=0.111 Sum_probs=151.8
Q ss_pred HhcCCCCCCCcEEEcCCcHH-HHHHHHHHHh-cCCCCEEEEc-------------cCcee-------cCCCcccChHHHH
Q 041151 122 RRDGYPSDPELIFLTDGASK-GVMQTLNCVI-RGEGDGVVLL-------------FHTTW-------KRQQIGVLIINDL 179 (463)
Q Consensus 122 ~~~g~~~~~~~i~~t~G~~~-al~~~~~~l~-~~~gd~Vlvp-------------~g~~~-------~~~~~~~d~~~~l 179 (463)
+..|++ +....++.+.++. .+.+++.++- +..++.|+.| +|.++ ..+....|. +.+
T Consensus 67 ~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~-~~i 144 (389)
T PF05889_consen 67 RLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDL-EAI 144 (389)
T ss_dssp HHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHH-HHH
T ss_pred HHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccH-HHH
Confidence 344654 2345666665543 4455555552 2567888888 77766 233444566 889
Q ss_pred HHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCC
Q 041151 180 QQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPF 259 (463)
Q Consensus 180 ~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (463)
++.+++. |+...+.++++++---+... +++++|+++|++||+..|+..||.. +...........-..
T Consensus 145 e~~i~~~---G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgv----Q~~~~~~~i~~a~~~---- 211 (389)
T PF05889_consen 145 EAKIEEL---GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGV----QSSKCMHLIQQAWRV---- 211 (389)
T ss_dssp HHHHHHH---CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT----T-HHHHHHHHHHHHH----
T ss_pred HHHHHHh---CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhh----hHHHHHHHHHHHHhc----
Confidence 9988764 33456667775544444432 4699999999999999999999985 211111111111111
Q ss_pred CCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHH
Q 041151 260 SKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRES 338 (463)
Q Consensus 260 ~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 338 (463)
+. -.+++-|.-|-|- -+...+.+.. .++..+..+.+... ..+..+......-...| +...|...+.++
T Consensus 212 GR--vda~vqS~dkNF~--VPvGgai~As--~~~~~i~~vs~~YpGRas~sp~ld~~itLl~L-----G~~g~~~ll~~r 280 (389)
T PF05889_consen 212 GR--VDAFVQSTDKNFM--VPVGGAIMAS--FDPSGILAVSKEYPGRASASPSLDLFITLLSL-----GCTGYGALLKER 280 (389)
T ss_dssp ST--CSEEEEEHHHHHC--EESSHEEEEE--SSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred CC--cceeeeecCCCEE--ecCCCcEEEe--cCHHHHHHHHHHhhhhhhcccchHHHHHHHHH-----hhhHHHHHHHHH
Confidence 12 1268899999983 4444455553 46788888887765 33333333333333332 123344555555
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccc-cCCceeEEeeecc-CChhhHHHHhhcCCCChHHHHHHHHHhcCeE----eeC
Q 041151 339 KGILESLRRRARMMTDGFNSCRNVVCN-FTEGAMYSFPQIR-LPPKAIEAAKRAGKVPDVFYCLRLLEATGIS----TVP 412 (463)
Q Consensus 339 ~~~~~~~~~~~~~l~~~L~~~pg~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~----v~p 412 (463)
......++++.+.+.+..++ .+. .|.....+.+.++ ++.. ...+..++...|..+||. |.|
T Consensus 281 ~~~f~~l~erl~~~aee~~e----~ll~~p~N~is~a~tl~~l~~~---------~~k~~~~lgs~Lf~R~VsG~RvV~~ 347 (389)
T PF05889_consen 281 KASFPYLKERLKKWAEEVGE----RLLETPRNHISMAFTLDTLYEI---------SQKDGTFLGSMLFKRGVSGIRVVTP 347 (389)
T ss_dssp HHHHHHHHHHHHHHHHHTTE----EBSSSTT-SSEEEEE-TTCCTC---------CSSHHHHHHHHHHHTTEESSEEEET
T ss_pred HHHHHHHHHHHHHHHHHhhh----hhcCCCCCCeeEEEECccchhh---------ccchhhhHHHHHHhCCcccceeecc
Confidence 55555555555444444433 222 2333333333333 1110 012445667778888874 333
Q ss_pred CCCCCCC----CCCcEEEEEec--CCcCcHHHHHHHHHHHHH
Q 041151 413 GSGFGQK----EGIFHLRTTIL--PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 413 g~~f~~~----~~~~~lRis~~--~~~e~i~~~~~~l~~~l~ 448 (463)
+..+... -...|+-++.+ .+.||++.++++|+++++
T Consensus 348 ~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 348 GGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 3333221 01247888555 899999999999998874
No 380
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.22 E-value=5.3e-05 Score=70.39 Aligned_cols=167 Identities=16% Similarity=0.248 Sum_probs=113.8
Q ss_pred CCCccCC-CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----------------
Q 041151 99 GLGAYSD-SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL---------------- 161 (463)
Q Consensus 99 ~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---------------- 161 (463)
...+|+- .-|...|..-.|+-++. ....-+..+.+| +.||..++..++ .|||+.+.-
T Consensus 56 ~stGYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~isG-THAI~~aLfg~L-RpgDell~i~G~PYDTLeevIG~rg 129 (416)
T COG4100 56 GSTGYGYDDLGRDTLERVYAQVFGA----EAALVRPQIISG-THAIACALFGIL-RPGDELLYITGSPYDTLEEVIGLRG 129 (416)
T ss_pred CCCCCCccccchhHHHHHHHHHhcc----ccceeeeeeecc-hhHHHHHHHhcc-CCCCeEEEecCCcchhHHHHhccCC
Confidence 3445543 23555666666666652 111124456666 789999999998 899998763
Q ss_pred --------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhC--Ce
Q 041151 162 --------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQE--NL 226 (463)
Q Consensus 162 --------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~--~~ 226 (463)
+|+.. -..+..+|. +.++..+++ ++|+|.+. +...-.=-.++.+++++++++.++- |+
T Consensus 130 ~~~gSL~dfgi~Y~~v~Lt~~gkiD~-~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ 202 (416)
T COG4100 130 EGQGSLKDFGIKYKAVPLTADGKIDI-QAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNV 202 (416)
T ss_pred CCcccHHHhCcceeecccccCCcccH-HHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCE
Confidence 33333 334678999 999999998 89999887 5444334457889999999998875 89
Q ss_pred EEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCce--eEEEEecCCChhHHHHH
Q 041151 227 VLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQR--GGYFEMTNIPPKTVDEI 299 (463)
Q Consensus 227 ~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R--~G~~~~~~~~~~~~~~l 299 (463)
++++|..|.+|.-. ..+... .. .+..+|+=|.- | .|+- .||++ +..+++++-
T Consensus 203 ivFVDNCYGEFvE~--~EPt~v-----------Ga---DliAGSLIKNp-G-GgiaktGGYia---Gk~~~ve~~ 256 (416)
T COG4100 203 IVFVDNCYGEFVEE--KEPTHV-----------GA---DLIAGSLIKNP-G-GGIAKTGGYIA---GKAELVEAA 256 (416)
T ss_pred EEEEeccchhhhhc--cCcccc-----------ch---hhhccceeeCC-C-Cceeeccceee---chHHHHHhh
Confidence 99999999998652 222221 11 26778999976 3 3332 58888 777877765
No 381
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.22 E-value=0.0018 Score=68.21 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=99.7
Q ss_pred cHHHHHHHHHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcC----C---
Q 041151 82 PADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRG----E--- 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----~--- 154 (463)
++.++-.+...+-+ .+...|-.+.+...+.+++-+++.+..|.+- +..+ +|+|++++...++.+-- + |
T Consensus 96 ~paila~~~a~~~N--~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~-~~G~-~TsGGT~ANl~aL~~AR-~~k~~p~a~ 170 (608)
T TIGR03811 96 MPAILAYNYAMLWN--GNNVAYESSPATSQMEEEVGKEFATLMGYKN-GWGH-IVADGSLANLEGLWYAR-NIKSLPFAM 170 (608)
T ss_pred HHHHHHHHHHHHhC--CCCCccccCchHHHHHHHHHHHHHHHhCCCC-CCeE-EeCChHHHHHHHHHHHH-Hhhhccchh
Confidence 45555444444433 2334443344668999999999999988753 3345 67788887775544321 1 0
Q ss_pred ---------------------------------------------C------CEEEEc-------------cCce-----
Q 041151 155 ---------------------------------------------G------DGVVLL-------------FHTT----- 165 (463)
Q Consensus 155 ---------------------------------------------g------d~Vlvp-------------~g~~----- 165 (463)
| ..|++| .|.-
T Consensus 171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVI 250 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEE
Confidence 0 046666 3331
Q ss_pred e--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe--EEEeccccccc
Q 041151 166 W--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL--VLLGDEVYQQN 237 (463)
Q Consensus 166 ~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~--~vi~Deay~~~ 237 (463)
. .+.++.+|+ +.|++.+++..++|..+-+|+-+-....+|.+=+.+++.+|++.++++++ |+.+|.+|+.+
T Consensus 251 ~VpvD~~~rmd~-~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 251 PVPVDSNYRMDI-NELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred EeecCCCCcCCH-HHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 1 456789999 99999999876666555667777888899999775555555554577887 69999999874
No 382
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.08 E-value=0.0043 Score=59.85 Aligned_cols=299 Identities=15% Similarity=0.116 Sum_probs=159.3
Q ss_pred CCCcHHHHHHHHHHhhhcCCCCCccCC------CCCCHHHHHHHHHHHHHhcCCCCCCC-cEEEcC-CcHHHHHHHHHHH
Q 041151 79 IVFPADAIARAKHYLSLTSGGLGAYSD------SRGIPGVRKEVAEFIERRDGYPSDPE-LIFLTD-GASKGVMQTLNCV 150 (463)
Q Consensus 79 ~~~p~~~~~a~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~-G~~~al~~~~~~l 150 (463)
+.+|+.+++.+.+.+.+..+ .+++- ..-...+-+...+.+++.+++| .+ .|++.. |++.....+...|
T Consensus 14 a~lp~~vL~~a~~e~~~~~g--~g~svme~SHRsk~~~~v~~~a~~~lreLl~iP--d~Y~VlflqGGat~qf~~~p~nL 89 (365)
T COG1932 14 AALPPEVLQQAQKELLDWNG--LGMSVMEISHRSKEFKNVLEEAEKDLRELLNIP--DDYKVLFLQGGATGQFAMAPMNL 89 (365)
T ss_pred ccCCHHHHHHHHHHHhhhcc--CCcceeeeccccHHHHHHHHHHHHHHHHHhCCC--CCceEEEEcCccHHHHHHHHHhh
Confidence 34588998888776666422 11111 1111234444444555555654 44 666655 6688888888888
Q ss_pred hcCCCCE--EEEc------------cCc--ee-----cC--CCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCcc
Q 041151 151 IRGEGDG--VVLL------------FHT--TW-----KR--QQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQ 207 (463)
Q Consensus 151 ~~~~gd~--Vlvp------------~g~--~~-----~~--~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~ 207 (463)
+ .+... |..- .+. .+ .. .+.-+++ +.+. +.+ +..-|++|.-+.-+|+
T Consensus 90 l-~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~-~~~~--~~~------~~ayv~~~~NeTi~Gv 159 (365)
T COG1932 90 L-GKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDL-SKWD--FSD------NDAYVHFCWNETISGV 159 (365)
T ss_pred h-cccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCCh-hhcc--cCC------CccEEEEecCCcccce
Confidence 7 55443 3332 221 11 11 1222333 3322 111 2333666755566677
Q ss_pred CCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEE
Q 041151 208 CLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFE 287 (463)
Q Consensus 208 ~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 287 (463)
-++. ...+. .+.++++|-+-..+. ...++..+ -++..|..|.+ |..| ++.++
T Consensus 160 ~v~~--~p~~~-----~~~~~v~D~SS~ils-----r~iDvsk~-------------dviyagaQKnl-GpaG--ltvvI 211 (365)
T COG1932 160 EVPE--LPDIG-----SDGLLVADASSAILS-----RPIDVSKY-------------DVIYAGAQKNL-GPAG--LTVVI 211 (365)
T ss_pred EccC--CCCCC-----CCceEEEecccHHhc-----CCCChhHc-------------ceEEEehhhcc-Cccc--eEEEE
Confidence 6652 11111 127888887765532 12334332 26669999999 8888 78888
Q ss_pred ecCCChhHHHHHHhh-hh----------hcccCChHHHHHHHHhcCCCCCCCchHHHHHHH---HHHHHHHHHHHHHHHH
Q 041151 288 MTNIPPKTVDEIYKI-AS----------IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE---SKGILESLRRRARMMT 353 (463)
Q Consensus 288 ~~~~~~~~~~~l~~~-~~----------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 353 (463)
+ ++++++++... .. ...+-+.+...+...+. ..-+|++. ++.+.++-+++.+.|+
T Consensus 212 v---r~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~--------lv~~Wlk~~GGl~~~~~rn~~ka~~LY 280 (365)
T COG1932 212 V---RPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLG--------LVFKWLKSQGGLEALEARNQAKAQLLY 280 (365)
T ss_pred E---cHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHH--------HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 6 88888887654 10 12333344433333221 11124433 4667778888899999
Q ss_pred HHhhcCCCcc--cccC--CceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEe
Q 041151 354 DGFNSCRNVV--CNFT--EGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTI 429 (463)
Q Consensus 354 ~~L~~~pg~~--~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~ 429 (463)
+.+.+- ++- .+.+ ...+.+.+++. ...+ +..++. .++++|+...-|..- . +.+|+|+
T Consensus 281 ~~id~s-~fy~~~v~~~~RS~mnV~f~~~--~~~l----------d~~fv~-eae~~gl~~lkGhr~----v-gGmRasi 341 (365)
T COG1932 281 DWIDKS-DFYRNLVAKANRSRMNVTFTLV--DAEL----------DKGFVA-EAEAAGLIYLKGHRS----V-GGLRASI 341 (365)
T ss_pred HHHHhC-CccccccchhhccceeEEEEcC--cHHH----------HHHHHH-HHHHcCCceeccccC----C-Cceeeee
Confidence 999876 322 1222 33444443333 2111 455554 466778877776321 1 2399999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 430 L--PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 430 ~--~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
- .+.++++. |.++++.+.+.
T Consensus 342 ynA~~~e~vea----L~~fm~~f~~~ 363 (365)
T COG1932 342 YNAVPLEDVEA----LTDFMDWFEET 363 (365)
T ss_pred ecCCCHHHHHH----HHHHHHHHHHh
Confidence 9 45555554 44555554443
No 383
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0016 Score=64.49 Aligned_cols=293 Identities=13% Similarity=0.150 Sum_probs=162.4
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh---cC-CC---CEEEEc-------------cCcee-
Q 041151 108 GIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI---RG-EG---DGVVLL-------------FHTTW- 166 (463)
Q Consensus 108 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~-~g---d~Vlvp-------------~g~~~- 166 (463)
+...+.+++-+++...++-+ ..+-=..|.|+++++..+-...- .. .| ..+++| .++++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~ 195 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELR 195 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEE
Confidence 34556666666665555544 11222356788888555444331 11 12 234444 33333
Q ss_pred ----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh-CCeEEEecccccccccCC
Q 041151 167 ----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ-ENLVLLGDEVYQQNIYQD 241 (463)
Q Consensus 167 ----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~-~~~~vi~Deay~~~~~~~ 241 (463)
....+.+|+ ..+.+.+++ ++..++.+-|+-|+|.+ +.+++|.+++.+ +++.+-+|.+-..|...-
T Consensus 196 ~V~~~~~~~~~D~-~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~ 265 (491)
T KOG1383|consen 196 EVPLDEGDYRVDP-GKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPA 265 (491)
T ss_pred eeeccccceEecH-HHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccc
Confidence 457899999 999999998 89999999999999988 778888888888 999999999987765410
Q ss_pred CCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHH-HHH-------hhh-hhcccCChH
Q 041151 242 ERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVD-EIY-------KIA-SIALSPNVP 312 (463)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~-~l~-------~~~-~~~~~~~~~ 312 (463)
.. .....+ +++ .....-|. .+-+|.=+.++| .||++. .++++.. .+. ... +.+...|..
T Consensus 266 ~~--~~~~~f--dFr---~p~V~Sis-a~~HKYGl~~~G--~~~vl~--r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~ 333 (491)
T KOG1383|consen 266 GY--LNEEEF--DFR---VPGVTSIS-ADGHKYGLAPAG--SSWVLY--RNKELLPHQLFFHTDWLGGIYASPTLNGSRP 333 (491)
T ss_pred cc--cCcccc--ccC---CCCceeEe-eccceeeeeecC--cEEEEE--cccccccceEEEeccccCccccCcccccCCc
Confidence 00 011000 111 11111122 223453114455 899987 4554432 221 111 112233333
Q ss_pred HHHHH---HHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CCceeEEeeeccCChhhHHHHh
Q 041151 313 AQIFM---GLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNF-TEGAMYSFPQIRLPPKAIEAAK 388 (463)
Q Consensus 313 ~q~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 388 (463)
+-.++ +.++.- +.+ .|. +..+...+....|++.+++.+++.+.. |.-++.+|-.-.+
T Consensus 334 g~~va~~wa~~~~l---G~e---GY~----~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~--------- 394 (491)
T KOG1383|consen 334 GSQVAAQWAALMSL---GEE---GYR----ENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV--------- 394 (491)
T ss_pred ccHHHHHHHHHHHh---hHH---HHH----HHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc---------
Confidence 22222 222221 111 222 233446677788899999887887764 4444444411111
Q ss_pred hcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 389 RAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 389 ~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
+.-.+..+|.+.|..+.. ..|.. .+-+++. ..++--++++..|++++++++...
T Consensus 395 ------~i~elsd~l~~~GW~lna-lq~P~-----a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 395 ------NIFELSDLLRKKGWILNA-LQFPA-----AIHICVTRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred ------chhhhhHHHHhcCcCccc-cCCCC-----ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 223356778888986543 33332 1333433 333335788888899988887643
No 384
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0029 Score=62.17 Aligned_cols=127 Identities=17% Similarity=0.246 Sum_probs=90.2
Q ss_pred CCCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEE--cCCcHHHHH--HHHHHHhcCCC----CEEEEc------
Q 041151 99 GLGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVM--QTLNCVIRGEG----DGVVLL------ 161 (463)
Q Consensus 99 ~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~--~~~~~l~~~~g----d~Vlvp------ 161 (463)
..+.|.| .+|+.++...+.+|+.+--|. +.|-+ .+|++.=.. ++++......| +++++|
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 4566665 568889999999999876443 33443 345433222 22333322333 689998
Q ss_pred -------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 162 -------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 162 -------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|.++ ..++..+|+ +.|++.+.+ ++.++.|+|||. .|.. ++.+.+|+++..++|..|..
T Consensus 170 NPASAam~G~~VV~V~~~~~G~VDl-ddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 170 NPASAAMAGFKVVVVKCDENGNVDL-DDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred ChhhHhhcCceEEEEecCCCCCccH-HHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEe
Confidence 55555 567888999 999999997 899999999986 3543 57899999999999999999
Q ss_pred ccccccccc
Q 041151 231 DEVYQQNIY 239 (463)
Q Consensus 231 Deay~~~~~ 239 (463)
|-+...-..
T Consensus 240 DGANlNA~v 248 (496)
T COG1003 240 DGANLNAIV 248 (496)
T ss_pred cCcchhhhh
Confidence 998765444
No 385
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.98 E-value=0.00044 Score=65.83 Aligned_cols=221 Identities=13% Similarity=0.162 Sum_probs=127.7
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCc-cCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHH
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTG-QCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVL 252 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG-~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~ 252 (463)
.+ +++|+.|.+..++...+-+|++.--+.--| .-.|++-.++|.+++++|++..|+||+.....-+ ..+.+.
T Consensus 254 Cl-~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT-----Gk~WaH- 326 (484)
T KOG1405|consen 254 CL-AEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT-----GKFWAH- 326 (484)
T ss_pred HH-HHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc-----Cceeee-
Confidence 34 677788887765554566666553344444 4568899999999999999999999998764321 122211
Q ss_pred HhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHH-HHhhhhhcccCChHHHHHHHHhcCCCCCCCchH
Q 041151 253 MDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDE-IYKIASIALSPNVPAQIFMGLMVNPLKPGDISY 331 (463)
Q Consensus 253 ~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 331 (463)
++.++ +. -.-+.+|||-| - +| ||.. +++++.. -.++.+ +|+..+.-...+..+++
T Consensus 327 ehw~l--~~---PpD~vTFSKK~-q-~g---Gffh----~~~frpn~pYrifN-TWmGdP~k~lll~~vv~--------- 382 (484)
T KOG1405|consen 327 EHWNL--DS---PPDVVTFSKKF-Q-TG---GFFH----DEEFRPNEPYRIFN-TWMGDPSKNLLLEEVVQ--------- 382 (484)
T ss_pred hhcCC--CC---Cccceehhhhh-h-cC---cccc----CcccCCCchHHHhh-hhcCChHHHHHHHHHHH---------
Confidence 11111 11 12346899988 3 33 5665 5555432 233333 56555555555555442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC----CC-cccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhc
Q 041151 332 EQFVRESKGILESLRRRARMMTDGFNSC----RN-VVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEAT 406 (463)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~----pg-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 406 (463)
.+ ..+.+.+..+..-++|.+.|.++ || +.-....|.|..| ..|.+. -.+.....++-+
T Consensus 383 --~I-~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~---d~ps~~-----------~Rdk~i~~~~~n 445 (484)
T KOG1405|consen 383 --EI-KREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAW---DCPSGS-----------IRDKLILIARLN 445 (484)
T ss_pred --HH-hHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEE---eCCChH-----------HHHHHHHHHHHc
Confidence 11 12345555556666777776653 54 3334556777666 555432 122334556777
Q ss_pred CeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHHHHH
Q 041151 407 GISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKFNDE 449 (463)
Q Consensus 407 gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~l~~ 449 (463)
||.+-. ||. ..+|+-.+ -.+...+.+++++.+.+..
T Consensus 446 Gv~~GG---Cg~----~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 446 GVNLGG---CGD----KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred Cceecc---ccc----ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 887633 443 24666666 4556677888888877653
No 386
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.87 E-value=0.0091 Score=60.00 Aligned_cols=266 Identities=15% Similarity=0.184 Sum_probs=123.0
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh--cCCCCEEEEc-----------------cCcee
Q 041151 106 SRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI--RGEGDGVVLL-----------------FHTTW 166 (463)
Q Consensus 106 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~~gd~Vlvp-----------------~g~~~ 166 (463)
++|..+.--++..++.+.-|.+ ..+.-+-.|++.+-..++.+.- +..+++|++| .|.++
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmd--vaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i 182 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMD--VANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEI 182 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSS--EE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCC--ccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence 4455444444555555554543 3344566677766666555432 1334689998 34444
Q ss_pred ---cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCC
Q 041151 167 ---KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDER 243 (463)
Q Consensus 167 ---~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~ 243 (463)
+.+..+.+ + .+ ++.+|++.+||. .|.+-+ +++|.+++++++.++++ -+.-. .. ..-
T Consensus 183 v~~~~~~~~~~--d------~~------~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~~-aL-~~l 241 (429)
T PF02347_consen 183 VEVPLDEDGTT--D------DD------DTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADPN-AL-GGL 241 (429)
T ss_dssp EEE-BBTTCSB---------ST------TEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGCC-GC-CTC
T ss_pred EEecccccCCc--c------cc------CeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCHH-HH-hCc
Confidence 21211111 1 12 799999999997 688844 88999999999988886 33321 11 111
Q ss_pred CccchHHHHHhcCCCCCCCceEEEEecCCcccCCCC----CceeEEEEecCCChhHHHHH--------------------
Q 041151 244 PFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGEC----GQRGGYFEMTNIPPKTVDEI-------------------- 299 (463)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~----G~R~G~~~~~~~~~~~~~~l-------------------- 299 (463)
.+.. ++ +.+ |++++ +|.| |.| |=-.|++.+ ..+++..+
T Consensus 242 --~~Pg----e~----GAD---I~vg~-~Q~f-g~p~~~GGP~~G~~a~---~~~l~r~lPGRiVG~t~D~~G~~~~~lt 303 (429)
T PF02347_consen 242 --KSPG----EY----GAD---IVVGE-HQTF-GIPMGFGGPGAGFFAV---REDLVRQLPGRIVGQTKDADGKRAFVLT 303 (429)
T ss_dssp ----GG----GG----T-S---EEEEC-CTTT-T---CCC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE
T ss_pred --CChh----hc----Ccc---EEeeC-CCCC-cccCCCCCCCeeeEEE---hhhhhhhCCCceecccccccccceeeec
Confidence 1111 12 222 55666 7877 432 333788875 44444432
Q ss_pred --------Hhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHH-H-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 041151 300 --------YKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQF-V-RESKGILESLRRRARMMTDGFNSCRNVVCNFTE 368 (463)
Q Consensus 300 --------~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~ 368 (463)
++.+. ..++++......++.+ |..+ - +=++++.+...++..++.+.|.+..+..+. .
T Consensus 304 LqtREQHIrReKAtSNIctnqaL~A~~a~~----------Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~--~ 371 (429)
T PF02347_consen 304 LQTREQHIRREKATSNICTNQALLALAAAI----------YLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD--N 371 (429)
T ss_dssp -GGGTCHHHGCCSTT---SS-HHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS--S
T ss_pred cccccccccccchhhhhhhhHHHHHHHHHH----------HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC--C
Confidence 11111 1233333222211111 1111 1 226778888999999999999986344433 2
Q ss_pred ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHH
Q 041151 369 GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESF 443 (463)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l 443 (463)
..||=++....+ + ..+.+ +.+.++.-- -.+.. ...+.+-+|+. .+.+||+.+++.|
T Consensus 372 ~~f~e~v~~~~~--------------~-~~~~~-l~~~~~~~g--l~~~~-~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 372 PFFFEFVVVFSK--------------D-KEVEE-LLKRGIEGG--LNLRY-PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp SSBSSEEEEESS----------------HHHHH-HHHTT------EEEGG-G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCceeeeeecCC--------------c-HHHHH-HHHHHHhcC--CCccc-cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 334333222221 1 11222 223333321 12221 12337788888 6778888887754
No 387
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.76 E-value=0.00077 Score=61.66 Aligned_cols=293 Identities=12% Similarity=0.153 Sum_probs=148.7
Q ss_pred hcCCCCCCCcEEEcCCcHHHHHHHHHHHh-cCCC-CEEEEc-------------cCcee-------cCCCcccChHHHHH
Q 041151 123 RDGYPSDPELIFLTDGASKGVMQTLNCVI-RGEG-DGVVLL-------------FHTTW-------KRQQIGVLIINDLQ 180 (463)
Q Consensus 123 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~~g-d~Vlvp-------------~g~~~-------~~~~~~~d~~~~l~ 180 (463)
..|+..-++.+++---+.-.+.+++..+- +.|. .-|+.+ +|.++ ..+..--|+ +.++
T Consensus 69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdl-eav~ 147 (432)
T KOG3843|consen 69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDL-EAVE 147 (432)
T ss_pred HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhH-HHHH
Confidence 44665555655554333335667777664 1343 334444 66665 223334577 8888
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCC
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFS 260 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (463)
..+++. ....|+...-....=..-+++.+++|+.+|..|++.-|+..+|.. .........+...+. +
T Consensus 148 ~~iee~-----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnaygl----qsee~i~~iaa~~~~----g 214 (432)
T KOG3843|consen 148 AIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL----QSEECIHKIAAAAEC----G 214 (432)
T ss_pred HHHHHh-----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccccc----chHHHHHHHHHHhhh----c
Confidence 888875 445443222222222233567899999999999999999999975 221111111111111 1
Q ss_pred CCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHHHHHHH
Q 041151 261 KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESK 339 (463)
Q Consensus 261 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (463)
. ...++-|+-|.| -+| +|-+++..-+..+++.+.+... ....+++.. .+..+|.. +...|.+...+.+
T Consensus 215 r--ida~vqsldknf-~vp---vggaiia~fk~n~iq~iak~ypgrasa~ps~d--llitll~~---gqn~f~e~~~eqk 283 (432)
T KOG3843|consen 215 R--IDAFVQSLDKNF-MVP---VGGAIIAAFKDNFIQEIAKMYPGRASASPSLD--LLITLLSL---GQNAFKELFGEQK 283 (432)
T ss_pred c--HHHHHHHhhhcc-eee---cchhHhhHhHHHHHHHHHHhCCCccccCccHH--HHHHHHHh---chhHHHHHHHHHH
Confidence 1 124668899988 333 3333321124677888877765 223333333 33333322 2355555555544
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeec-cCChhhHHHHhhcCCCChHHHHHHHHHhcCeE---eeCCC-
Q 041151 340 GILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQI-RLPPKAIEAAKRAGKVPDVFYCLRLLEATGIS---TVPGS- 414 (463)
Q Consensus 340 ~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~---v~pg~- 414 (463)
++...++.+...+.+...++ -+..|+....+-..+ .+++.. +......-..|...||. |.|.+
T Consensus 284 emf~~l~~ki~~~ae~~~e~---l~~~p~n~is~amtl~ti~~~k---------~kavt~~gsilfak~isgarvv~~~q 351 (432)
T KOG3843|consen 284 EMFLKLRNKIIKFAEAIGEC---LLETPENEISLAMTLKTIDEAK---------DKAVTLFGSILFAKGISGARVVPLGQ 351 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhh---hhcCCCchhhhhhhhccCChHH---------hhHHHHHHHHHHhccccCceEeeccc
Confidence 44444444444444444432 223344433332222 223221 01222233344455553 33321
Q ss_pred -----------CCCCCCC---CcEEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 041151 415 -----------GFGQKEG---IFHLRTTIL--PAEEDMPAIMESFKKFNDEFME 452 (463)
Q Consensus 415 -----------~f~~~~~---~~~lRis~~--~~~e~i~~~~~~l~~~l~~~~~ 452 (463)
.|+.... ..|+-+.++ .+..|+++++.||...++.+++
T Consensus 352 ~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~k 405 (432)
T KOG3843|consen 352 MKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRK 405 (432)
T ss_pred cceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHH
Confidence 2222111 134555444 7779999999999988887765
No 388
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.039 Score=54.83 Aligned_cols=303 Identities=14% Similarity=0.097 Sum_probs=154.8
Q ss_pred CHHHHHHHHHHHHHhcCCC-----C---CCCcEEEcCCcHHHHHHHHHHHh---c--CCCC-----------EEEEc---
Q 041151 109 IPGVRKEVAEFIERRDGYP-----S---DPELIFLTDGASKGVMQTLNCVI---R--GEGD-----------GVVLL--- 161 (463)
Q Consensus 109 ~~~lr~~ia~~~~~~~g~~-----~---~~~~i~~t~G~~~al~~~~~~l~---~--~~gd-----------~Vlvp--- 161 (463)
.++|.--+-+|+.+..++| . +.-.|+.++.+-..+-.++.+-. + +.+. -|...
T Consensus 111 ~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDq 190 (511)
T KOG0628|consen 111 CTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQ 190 (511)
T ss_pred hHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCc
Confidence 4789989999998877764 1 22366666654433333333321 0 1221 12221
Q ss_pred -----------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe
Q 041151 162 -----------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL 226 (463)
Q Consensus 162 -----------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~ 226 (463)
.|+++ .+.+++++. +.|++++.+..++| -+-.+++.+-. |..+.+-+++.+|..+|+++++
T Consensus 191 ahssveka~~i~~VklR~l~td~n~~mr~-~~L~~AIe~D~arG-lIPf~v~at~G--TT~~ca~D~l~elg~Vc~~~gl 266 (511)
T KOG0628|consen 191 AHSSVEKACLIAGVKLRALPTDENFGMRG-DTLRKAIEEDIARG-LIPFFVCATLG--TTSSCAFDELEELGPVCREEGL 266 (511)
T ss_pred ccchHHHhHhhcceeEEEeecccCcCCCH-HHHHHHHHHHHhCC-CccEEEEEeec--CccccccccHHHhcchhhhcCE
Confidence 44444 455999999 99999999876665 34444333443 2333455789999999999999
Q ss_pred EEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCC---------ChhHH-
Q 041151 227 VLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI---------PPKTV- 296 (463)
Q Consensus 227 ~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~---------~~~~~- 296 (463)
|+-+|.+|+...+. .+-+..+..++ ..- .=+....||++ +..+-+..+-+.++ ++...
T Consensus 267 WLHVDAAYAGsa~i----CpE~r~l~rGi----e~a--DSfn~n~hK~~--~vnfDCs~lWvkd~~~~~~~~~vdp~yL~ 334 (511)
T KOG0628|consen 267 WLHVDAAYAGSAFI----CPEFRYLMRGI----EYA--DSFNFNPHKWL--LVNFDCSPLWVKDGTKLSRAFNVDPLYLK 334 (511)
T ss_pred EEEeehhhcccccc----CHHHHHHhhcc----hhh--ccccCChhhee--EEeeeeecceeecCceeeeeeecChHhhc
Confidence 99999999965441 11233332222 110 01334556643 23443333332111 11110
Q ss_pred HHHHh-hhh-hcccCChHHH-HHHHHhcCCCCCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHhhcCCCcccccCCc-
Q 041151 297 DEIYK-IAS-IALSPNVPAQ-IFMGLMVNPLKPGDISYEQFVRESKGILES---LRRRARMMTDGFNSCRNVVCNFTEG- 369 (463)
Q Consensus 297 ~~l~~-~~~-~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~L~~~pg~~~~~~~g- 369 (463)
..... ... ..|..+..-- ..+..++. .+.+. .+.++++ .-+..+.+.+.+.+-+.+++..+..
T Consensus 335 h~~~~~~~Dyrhwqipl~rRfRSLKlWfv--------~R~~G--ve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~l 404 (511)
T KOG0628|consen 335 HAYQGSAPDYRHWQIPLGRRFRSLKLWFV--------LRSYG--VENLQNYIREHVRLAKEFETLVRADPRFEIVNKRIL 404 (511)
T ss_pred chhhccCCCccccccccccchhhHHHHHH--------HHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccccc
Confidence 01000 000 1111111000 00111100 00010 1122222 2222333444444434566654432
Q ss_pred eeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHHHHHHHHHHH
Q 041151 370 AMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMPAIMESFKKF 446 (463)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~~~~~~l~~~ 446 (463)
|+..| +++-... ....++.++-....|.+.|.+.- +.-.+|++++ +++++++.+.+.|.+.
T Consensus 405 gLvcF-Rlk~~N~-----------~ne~Ll~~in~~g~i~l~~~~l~----gk~vlRf~V~s~~t~~~di~~a~~~I~~~ 468 (511)
T KOG0628|consen 405 GLVCF-RLKGDNE-----------INEALLNRLNSSGRIHLVPASLH----GKFVLRFAVCSPLTNESDIDEAWKIIFEA 468 (511)
T ss_pred ceeEE-eecCCcH-----------HHHHHHHHHHhcCcEEEEEeeec----ceEEEEEEecCCCCcHHHHHHHHHHHHHH
Confidence 33332 2321111 13555666666667999886653 4457999999 7889999999999998
Q ss_pred HHHHHHH
Q 041151 447 NDEFMEQ 453 (463)
Q Consensus 447 l~~~~~~ 453 (463)
..++.++
T Consensus 469 a~~l~~~ 475 (511)
T KOG0628|consen 469 ADELFEA 475 (511)
T ss_pred HHHHHhh
Confidence 8876543
No 389
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.46 E-value=0.14 Score=50.69 Aligned_cols=257 Identities=15% Similarity=0.220 Sum_probs=137.2
Q ss_pred cCCCCCCCcEEEcCCcHHHHHHHHHHHh--cCCCCEEEEc-----------------cCceecCCCcccChHHHHHHHHH
Q 041151 124 DGYPSDPELIFLTDGASKGVMQTLNCVI--RGEGDGVVLL-----------------FHTTWKRQQIGVLIINDLQQSVA 184 (463)
Q Consensus 124 ~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~~gd~Vlvp-----------------~g~~~~~~~~~~d~~~~l~~~l~ 184 (463)
-|.++. |--+--+++.+-+.+..+.- +++..+++|+ .|.++...+.. |. +.|++. .
T Consensus 133 TGm~VA--NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-d~-~~l~~~-~ 207 (450)
T COG0403 133 TGLDVA--NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-DL-DDLESA-D 207 (450)
T ss_pred hCCCcc--cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-hh-hhhhhc-c
Confidence 354433 33344555555555555442 2346889998 33333111111 66 777777 4
Q ss_pred HHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec-ccccccccCCCCCccchHHHHHhcCCCCCCCc
Q 041151 185 QARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD-EVYQQNIYQDERPFVSSKKVLMDMGLPFSKEV 263 (463)
Q Consensus 185 ~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D-eay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (463)
+. .+-++++.+|+. .|. ..+++.+|.+.+++++.++++= |.-+.... +++ .+.+
T Consensus 208 ~~-----~~~gv~vQyP~~-~G~--~~~d~~~l~~~~h~~~al~~v~aDplaL~LL---~pP--------------Ge~G 262 (450)
T COG0403 208 DG-----DVFGVLVQYPNT-FGI--VEEDLRALIEAAHSAGALVIVAADPLALGLL---KPP--------------GEFG 262 (450)
T ss_pred cc-----CeEEEEEecCCC-CCc--cchhHHHHHHHHhhcCCEEEEEechhHhhcc---CCc--------------cccC
Confidence 32 688899899984 563 3356999999999998777642 11111111 111 2222
Q ss_pred eEEEEecCCcccCCC----CCceeEEEEecCCChhHHHH---------------------H-------Hhhhh-hcccCC
Q 041151 264 QLVSFHTVSKGYWGE----CGQRGGYFEMTNIPPKTVDE---------------------I-------YKIAS-IALSPN 310 (463)
Q Consensus 264 ~~i~~~S~SK~~~g~----~G~R~G~~~~~~~~~~~~~~---------------------l-------~~~~~-~~~~~~ 310 (463)
-.|++++..- | |+ .|=.+||..+ ..++... | ++-+. .+++++
T Consensus 263 ADIvvG~~Qr-f-GvPmgfGGPhag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTn 337 (450)
T COG0403 263 ADIVVGSAQR-F-GVPMGFGGPHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTN 337 (450)
T ss_pred CceEEecCcc-c-CCCcCCCCcceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHH
Confidence 3477888765 3 33 3555778775 3433321 1 11111 123333
Q ss_pred hHHHHHHHHhcCCCCCCCchHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCC-CcccccCCceeEEeeeccCChhhHHHH
Q 041151 311 VPAQIFMGLMVNPLKPGDISYEQFV--RESKGILESLRRRARMMTDGFNSCR-NVVCNFTEGAMYSFPQIRLPPKAIEAA 387 (463)
Q Consensus 311 ~~~q~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~p-g~~~~~~~g~~~~~~~~~~~~~~~~~~ 387 (463)
....+.++++ |..+. .-++++..+..+...++.+.|++.. |+.+... .||--+.++++..
T Consensus 338 QaLlA~~As~----------y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~----- 400 (450)
T COG0403 338 QALLALAASM----------YAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEE----- 400 (450)
T ss_pred HHHHHHHHHH----------HHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchh-----
Confidence 2222222221 11111 2256788888889999999999752 5665543 6666555665521
Q ss_pred hhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--CCcCcHHHHHHHHHHH
Q 041151 388 KRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL--PAEEDMPAIMESFKKF 446 (463)
Q Consensus 388 ~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~--~~~e~i~~~~~~l~~~ 446 (463)
..+.+.......|+-++.-. . ..+=+++. .+.++++.+++.+...
T Consensus 401 -------~~~~l~~~~~~~G~~L~~~~---~----~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 401 -------VAEALLAAAIAGGINLRRVD---A----DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -------HHHHHHHHHHhcCCceeeec---C----CceEEEeecccCHHHHHHHHHHHhhh
Confidence 12222333445566665422 1 14667776 5678888888777543
No 390
>PLN02672 methionine S-methyltransferase
Probab=97.38 E-value=0.0051 Score=68.59 Aligned_cols=204 Identities=10% Similarity=-0.007 Sum_probs=129.0
Q ss_pred HHHhhhcCCCCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHh-----cCCCCEEEEc---
Q 041151 90 KHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVI-----RGEGDGVVLL--- 161 (463)
Q Consensus 90 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-----~~~gd~Vlvp--- 161 (463)
...+.. .....|-++.|...+|..||.|++..+++++++++|++.++-..||.++++.+. .+.+.+-.+|
T Consensus 411 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1082)
T PLN02672 411 ASALKG--LSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPKKW 488 (1082)
T ss_pred HHHHcc--CCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCHHH
Confidence 334444 367788899999999999999999999999999999999999999988887652 1455555555
Q ss_pred ------cC--------cee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 162 ------FH--------TTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 162 ------~g--------~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
.| .++ .+..-.- +.+.+.++.. ++++|+..-.. +-..+....+.|++.+++.|
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 557 (1082)
T PLN02672 489 LTSLAIENATSDSKSDDVITVIEAPRQS---DLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIG 557 (1082)
T ss_pred HhHhhhhcccccCccCCeEEEEeCCCcc---hHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhhC
Confidence 11 111 2222222 3455666664 78888765322 33445567999999999999
Q ss_pred eEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhh-
Q 041151 226 LVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIAS- 304 (463)
Q Consensus 226 ~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 304 (463)
.+++.|.+-..- .+.......+..++.+ .+.. .+..++.++-|.- -.+.+-+.+++- -+..+...+.+...
T Consensus 558 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 629 (1082)
T PLN02672 558 ARLFLDISDHLE-LSSLPGSNGVLKYLAG--HPLP--SHAAIICGLVKNQ-VYSDLEVAFVIS--ENEAVLKALSKTGEV 629 (1082)
T ss_pred cEEEEehhhhee-eccCCCcccHHHHhcC--CCCC--cchhHhhhhhhcc-ccccceEEEEec--CcHHHHHHHHHHHHh
Confidence 999999764321 1111111222222211 1111 1345666676664 348999999984 45566677665443
Q ss_pred hcccCChHHH
Q 041151 305 IALSPNVPAQ 314 (463)
Q Consensus 305 ~~~~~~~~~q 314 (463)
....++.++|
T Consensus 630 ~~~~~~~~~~ 639 (1082)
T PLN02672 630 LEGRTAIISQ 639 (1082)
T ss_pred hccchHHHHH
Confidence 3344455555
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.24 E-value=0.14 Score=56.35 Aligned_cols=226 Identities=11% Similarity=0.096 Sum_probs=122.1
Q ss_pred CCEEEEccCcee----------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 155 GDGVVLLFHTTW----------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 155 gd~Vlvp~g~~~----------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
..+|+|+..+.+ ...++.+-. +.+++.+.+ ++-++++.+||. .|.+ +++++|.+++++.
T Consensus 168 ~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-~~~~~~~~~------~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~~ 236 (954)
T PRK12566 168 SNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-DAVDNLAAH------AVFGALLQYPDT-HGEI---RDLRPLIDQLHGQ 236 (954)
T ss_pred CCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-cchhhcCCC------CEEEEEEECCCC-ceEE---ccHHHHHHHHHHc
Confidence 568989844433 223333334 556554443 688888999986 6888 4588899999998
Q ss_pred CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccC---CCCCceeEEEEecCCChhHHHHH--
Q 041151 225 NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYW---GECGQRGGYFEMTNIPPKTVDEI-- 299 (463)
Q Consensus 225 ~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~---g~~G~R~G~~~~~~~~~~~~~~l-- 299 (463)
+.++++ .+.- +..+ - ..+. .+.+=.|++++- +.|+ |..|=-.|++.+ ..++...+
T Consensus 237 gal~~~-~~d~-laL~-l--l~~P-----------ge~GADI~vG~~-Q~fGvp~~~GGP~ag~~a~---~~~~~R~~PG 296 (954)
T PRK12566 237 QALACV-AADL-LSLL-V--LTPP-----------GELGADVVLGST-QRFGVPMGYGGPHAAYFAC---RDDYKRAMPG 296 (954)
T ss_pred CCEEEE-EeCH-HHHh-C--CCCh-----------hhcCCcEEeeCC-CcCCCCCCCCCCCeeeeee---hHHHHhhCCC
Confidence 887663 2211 1110 0 0111 111223566633 2220 222334788875 44444322
Q ss_pred --------------------------Hhhhh-hcccCChHHHHHHHHhcCCCCCCCchHHHH-HHH-HHHHHHHHHHHHH
Q 041151 300 --------------------------YKIAS-IALSPNVPAQIFMGLMVNPLKPGDISYEQF-VRE-SKGILESLRRRAR 350 (463)
Q Consensus 300 --------------------------~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 350 (463)
++-+. .+++++....+.++.+ |..+ -.+ ++++.++..++..
T Consensus 297 RivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~----------Y~~~~Gp~Gl~~ia~~~~~~a~ 366 (954)
T PRK12566 297 RIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF----------YAVYHGPEGLKRIAQRVHRLTA 366 (954)
T ss_pred CccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH----------HHHHhChHHHHHHHHHHHHHHH
Confidence 11111 1222222222222222 2112 122 5566777888888
Q ss_pred HHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec
Q 041151 351 MMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL 430 (463)
Q Consensus 351 ~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~ 430 (463)
++.+.|.+. |+++... .||--+.+++.. +..+ +.....+.||-++--+ ...+.||+.
T Consensus 367 ~l~~~l~~~-g~~~~~~--~fF~~~~v~~~~------------~~~~-~~~~a~~~~~n~r~~~-------~~~~~~s~d 423 (954)
T PRK12566 367 ILAAGLEAK-GIKRLNR--HFFDTLTLEVGG------------AQAA-IIESAEAARINLRILG-------RGRLGVSLD 423 (954)
T ss_pred HHHHHHHhc-CCccccC--CccceEEEEccC------------CHHH-HHHHHHHCCCeeEEeC-------CCeEEEEeC
Confidence 999999884 8886543 566554444311 1233 3455666788877522 235888888
Q ss_pred --CCcCcHHHHHHHHH
Q 041151 431 --PAEEDMPAIMESFK 444 (463)
Q Consensus 431 --~~~e~i~~~~~~l~ 444 (463)
.+.+|++.++..+.
T Consensus 424 e~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 424 ETCDEATVARLFDIFL 439 (954)
T ss_pred CCCCHHHHHHHHHHhc
Confidence 78888888888884
No 392
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.11 E-value=0.027 Score=55.30 Aligned_cols=318 Identities=11% Similarity=0.086 Sum_probs=157.1
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-CCC----------CEEEEc------
Q 041151 99 GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-GEG----------DGVVLL------ 161 (463)
Q Consensus 99 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~g----------d~Vlvp------ 161 (463)
+..-|--..+.....+.+-..+.+-.|++...+.|+--.|+...++.+.-+--+ -|+ +-|+..
T Consensus 129 n~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHY 208 (510)
T KOG0629|consen 129 NMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHY 208 (510)
T ss_pred CCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchh
Confidence 344444444444455556566656667776656666555555545444433210 122 223332
Q ss_pred --------cC-----cee--cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe
Q 041151 162 --------FH-----TTW--KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL 226 (463)
Q Consensus 162 --------~g-----~~~--~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~ 226 (463)
+| +.. ......++. ++||+.|-...++|..+=.+-.+.-...-|.. +++..|+++|++|++
T Consensus 209 Si~kaAa~lg~gtd~c~~v~t~e~Gkm~~-~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~l 284 (510)
T KOG0629|consen 209 SIKKAAAFLGLGTDHCIKVKTDERGKMIP-DDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKL 284 (510)
T ss_pred hHHHHHHHhccCCceeEEecccccCccch-HHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCE
Confidence 22 111 556788999 99999998764444222222222335555666 568999999999999
Q ss_pred EEEeccccccc-ccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCChhHHHHHHhhhhh
Q 041151 227 VLLGDEVYQQN-IYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASI 305 (463)
Q Consensus 227 ~vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~ 305 (463)
|+-+|.+|... ..+..+.+ -+.. . +..+ -+..+.+|.+ | +.+.++..++ ....+.++-......
T Consensus 285 WmHvDAAwGGglLmS~k~R~-kl~G----i-----era~-SvtwnpHK~~-g-aplqCsa~l~--r~~gll~~Cn~~~A~ 349 (510)
T KOG0629|consen 285 WMHVDAAWGGGLLMSRKHRH-KLTG----I-----ERAN-SVTWNPHKLM-G-APLQCSAFLT--REEGLLQRCNQMSAI 349 (510)
T ss_pred EEEeecccccccccChhhHh-hccC----c-----cccC-ceeecHHHhh-c-CcchhhHHHH--HHHHHHHhhcccchh
Confidence 99999999863 22111111 1111 1 1112 2457788988 5 5777777764 223333322211100
Q ss_pred c-ccCC---hHHHHHHHHhcCCCCCCCchHHHHHHH-------HHHHHHHHHHHHHHHHHHhhcCCCccc-cc--CC-ce
Q 041151 306 A-LSPN---VPAQIFMGLMVNPLKPGDISYEQFVRE-------SKGILESLRRRARMMTDGFNSCRNVVC-NF--TE-GA 370 (463)
Q Consensus 306 ~-~~~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~L~~~pg~~~-~~--~~-g~ 370 (463)
. +... ..+.-+....+.+++ ....+..|+-| .+....++-++++++.+.|++.+|+.. .. |+ -+
T Consensus 350 YLFq~dK~YdvS~DTgdK~iQCGR-h~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~n 428 (510)
T KOG0629|consen 350 YLFQQDKFYDVSYDTGDKAIQCGR-HVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVN 428 (510)
T ss_pred hhhccCceeecccccccchhhcCc-cccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEE
Confidence 0 0000 000011111122211 00111111111 234566778889999999999866433 22 44 23
Q ss_pred eEEeeeccCChhhHHHHhhcCCCChHH----------HHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---CCcCcHH
Q 041151 371 MYSFPQIRLPPKAIEAAKRAGKVPDVF----------YCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---PAEEDMP 437 (463)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~~~e~i~ 437 (463)
+..| -.|.... +...+.+ .+...+-+.|-....=...+. ..+++|+.+. .+.++++
T Consensus 429 v~fw---~vp~~lR------~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~--~~nffr~v~sn~a~~~ad~d 497 (510)
T KOG0629|consen 429 VCFW---YVPPSLR------GWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGD--KPNFFRMVISNPALTEADLD 497 (510)
T ss_pred Eeec---cCchHhc------cCcccchhhhHHHhhCcHHHHHHHhccceeeEeccccc--ccchhheecccchhhhhhHH
Confidence 3333 2333211 1111111 122233344543332111121 2348999888 4778888
Q ss_pred HHHHHHHHHH
Q 041151 438 AIMESFKKFN 447 (463)
Q Consensus 438 ~~~~~l~~~l 447 (463)
-+++.|..+-
T Consensus 498 flldEIerlg 507 (510)
T KOG0629|consen 498 FLLDEIERLG 507 (510)
T ss_pred HHHHHHHHhc
Confidence 8888776543
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.64 E-value=0.16 Score=47.51 Aligned_cols=301 Identities=15% Similarity=0.130 Sum_probs=149.0
Q ss_pred CcHHHHHHHHHHhhhcCCCCCc---c-CCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhc-C--
Q 041151 81 FPADAIARAKHYLSLTSGGLGA---Y-SDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIR-G-- 153 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~~~~~---Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~-- 153 (463)
+|..++..+...+-++.+.-.+ - ..+.....+.+.-...+++.++++-+-+-+++-.|++.-+..+...|.- +
T Consensus 18 lp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g 97 (370)
T KOG2790|consen 18 LPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHG 97 (370)
T ss_pred CCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccC
Confidence 4888888887766664321000 0 1122234455555555666666553333444555666667666666641 2
Q ss_pred -CCCEEEEc------------cCce--e----cCC--CcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH
Q 041151 154 -EGDGVVLL------------FHTT--W----KRQ--QIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 212 (463)
Q Consensus 154 -~gd~Vlvp------------~g~~--~----~~~--~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~ 212 (463)
..|-|++- +|.. + ... +--+|. +.|+.. ++.+.+++|.--..-|+-++.-
T Consensus 98 ~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~-~~w~~~--------~da~yvyyCaNETVHGVEf~~~ 168 (370)
T KOG2790|consen 98 RCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDP-STWELN--------PDASYVYYCANETVHGVEFDFI 168 (370)
T ss_pred CccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCCh-hhcccC--------CCccEEEEecCceeeceecCCC
Confidence 33555553 2211 1 111 122444 444321 1567778885444446554421
Q ss_pred HHHHHHHHhhhCCeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCcccCCCCCceeEEEEecCCC
Q 041151 213 NLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP 292 (463)
Q Consensus 213 ~l~~l~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 292 (463)
- +-.-++..++.|-+--.+. + +..+ .+ .-+++.+..|.+ |++|+. .+++ .
T Consensus 169 P------~~~~~~~vlVaDmSSnflS----r-pvDv-----------sk--~gvi~aGAQKN~-G~aG~T-vviv----r 218 (370)
T KOG2790|consen 169 P------VNDPKGAVLVADMSSNFLS----R-PVDV-----------SK--FGVIFAGAQKNV-GPAGVT-VVIV----R 218 (370)
T ss_pred C------CCCCCCceEEEecccchhc----C-Cccc-----------hh--cceEEecccccc-CccccE-EEEE----e
Confidence 1 1124578888886644321 2 2222 22 237789999999 889963 3333 5
Q ss_pred hhHHHHHHhhh-------------hhcccCChHHHHHHHHhcCCCCCCCchHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 041151 293 PKTVDEIYKIA-------------SIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRE---SKGILESLRRRARMMTDGF 356 (463)
Q Consensus 293 ~~~~~~l~~~~-------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L 356 (463)
++++....... +...+++.+..+++-..+ +|+.+ +..+.+.-.++.+.+++.+
T Consensus 219 ~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~-----------~~il~~GGl~a~e~~n~~KskllYd~i 287 (370)
T KOG2790|consen 219 KDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVF-----------EWILEKGGLAAMEKLNQEKSKLLYDAI 287 (370)
T ss_pred hhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHH-----------HHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 55654433221 122344444444443333 12222 3345555566788999999
Q ss_pred hcCCCccccc--CC--ceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec--
Q 041151 357 NSCRNVVCNF--TE--GAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTIL-- 430 (463)
Q Consensus 357 ~~~pg~~~~~--~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~-- 430 (463)
.+..|+-..+ |. .-+-+..+++ +... +.+|+.+..+++=|.+ -|.. .-+.+|-|+=
T Consensus 288 D~s~gfy~cpVe~~~RS~MNV~Fri~-~d~L-----------e~eFLkeA~~~~mv~L-KGhR-----SVGGiRASlYNA 349 (370)
T KOG2790|consen 288 DNSNGFYRCPVEPSVRSRMNVPFRIE-KDEL-----------EAEFLKEAAKEHMVQL-KGHR-----SVGGIRASLYNA 349 (370)
T ss_pred HhcCCeEEcccchhhhhhcccceeec-chHH-----------HHHHHHHHHHhhhhcc-cccc-----ccccchhhhhcc
Confidence 8765654332 22 2233332333 1111 4566666555543333 2221 1124888887
Q ss_pred CCcCcHHHHHHHHHHHHHHHHHH
Q 041151 431 PAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 431 ~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.+-++.+. |.++++++.+.
T Consensus 350 isv~~~q~----L~~~m~~F~k~ 368 (370)
T KOG2790|consen 350 ISVEEVQK----LAAFMKEFQKK 368 (370)
T ss_pred ccHHHHHH----HHHHHHHHHHh
Confidence 56555554 44555555443
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=94.07 E-value=5.7 Score=37.88 Aligned_cols=142 Identities=10% Similarity=0.005 Sum_probs=90.8
Q ss_pred CcHHHHHHHHHHhhhcCC------CCCccCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 81 FPADAIARAKHYLSLTSG------GLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 81 ~p~~~~~a~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
.|..+.+.+.+.+..... -...-+...+....-..++...+ ...++|.+.|+-+-.+..++..+. +|
T Consensus 79 mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVG------A~e~EvavmNsLTvNlh~Ll~sFy-KP 151 (465)
T KOG3846|consen 79 MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVG------AQENEVAVMNSLTVNLHSLLISFY-KP 151 (465)
T ss_pred CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhcc------CCchhhhhHhhhhhHHHHHHHHhc-CC
Confidence 355555555555544211 12233445556667777777765 556799999999988998888886 66
Q ss_pred CC---EEEEc-----------------cCcee--------cCCC-cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCC
Q 041151 155 GD---GVVLL-----------------FHTTW--------KRQQ-IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPT 205 (463)
Q Consensus 155 gd---~Vlvp-----------------~g~~~--------~~~~-~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt 205 (463)
-. +|+.. .|..+ +..+ ..+-. +.+.+.+... |....+|.++..+.-|
T Consensus 152 TekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRt-eDILd~IEkn---gDeiA~v~fSGvqyYT 227 (465)
T KOG3846|consen 152 TEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRT-EDILDTIEKN---GDEIALVCFSGVQYYT 227 (465)
T ss_pred cchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhH-HHHHHHHHhc---CCeEEEEEeecceeec
Confidence 53 46654 44444 3333 23344 5555555542 3345666667889999
Q ss_pred ccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 206 GQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 206 G~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
|+.+. +.+|...-+..|++|=.|-+|+.
T Consensus 228 GQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv 255 (465)
T KOG3846|consen 228 GQYFD---IGAITFAGQFKGCLVGFDLAHAV 255 (465)
T ss_pred ccccc---hhhhhhcccCCCcEechhhhhhh
Confidence 99998 56666555567999999999986
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=86.22 E-value=50 Score=35.11 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCCccCC---CCCCHHHHHHHHHHHHHhcCCCCCCCcEEEc--CCc---HHHHHHHHHHHhcCCC----CEEEEc-----
Q 041151 99 GLGAYSD---SRGIPGVRKEVAEFIERRDGYPSDPELIFLT--DGA---SKGVMQTLNCVIRGEG----DGVVLL----- 161 (463)
Q Consensus 99 ~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t--~G~---~~al~~~~~~l~~~~g----d~Vlvp----- 161 (463)
+.+.|.| .+|+..+-..+.+++.+--| -|++-+- +|+ ..++..+-..+. ..| ..-++|
T Consensus 567 nIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL~~IRaY~~-~kge~hRnvClIPvSAHG 641 (1001)
T KOG2040|consen 567 NIHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGLRVIRAYLE-SKGEGHRNVCLIPVSAHG 641 (1001)
T ss_pred cCCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhHHHHHHHHH-hccCCcceeEEEeecccC
Confidence 4566666 56888888888888865433 2344443 332 334443333333 344 345667
Q ss_pred --------cCcee----cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 162 --------FHTTW----KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 162 --------~g~~~----~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
+|.++ ......+|. .+|.+...+..+ +-.++.++.|+.- |.. ++.++.++++..+||--|.
T Consensus 642 TNPASA~MagmkvvpV~~~~~G~id~-~dLk~kaekh~~---~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 642 TNPASAAMAGMKVVPVGCDANGNIDM-VDLKAKAEKHKD---NLAALMVTYPSTH-GVF--EEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred CChhhHHhcCCEEEEeeccCCCCccH-HHHHHHHHHhhh---hhheeEEeccccc-ccc--cccHHHHHHHHHhcCCEEE
Confidence 56665 556788999 999887765422 5788889998752 443 4679999999999999999
Q ss_pred ecccccc
Q 041151 230 GDEVYQQ 236 (463)
Q Consensus 230 ~Deay~~ 236 (463)
.|-+...
T Consensus 715 lDGANMN 721 (1001)
T KOG2040|consen 715 LDGANMN 721 (1001)
T ss_pred ecCCCcc
Confidence 9988764
No 396
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=75.50 E-value=19 Score=32.90 Aligned_cols=84 Identities=19% Similarity=0.276 Sum_probs=59.8
Q ss_pred cEEEcCCcHHHHHHHHHHHhcCCCCEEEE-----c----------------------cCcee---cCCC-cccChHHHHH
Q 041151 132 LIFLTDGASKGVMQTLNCVIRGEGDGVVL-----L----------------------FHTTW---KRQQ-IGVLIINDLQ 180 (463)
Q Consensus 132 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv-----p----------------------~g~~~---~~~~-~~~d~~~~l~ 180 (463)
-|.+.+|+.....++..++ ..|..|.. | .|..+ .... ..-.. ++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~--~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~ev-e~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL--EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREV-EELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH--HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhH-HHHH
Confidence 3667888898888888887 45644332 2 33333 2222 33345 8888
Q ss_pred HHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 181 QSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 181 ~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
+++... +..+|+ +|.+.|..+...+-.+|++.++.++.
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee
Confidence 888875 667887 89999999999999999999997763
No 397
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=62.69 E-value=2.2e+02 Score=30.55 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccccCCceeEEeeeccCChhhHHHHhhcCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 041151 338 SKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFG 417 (463)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~L~~~pg~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~ 417 (463)
++.+.++.....-.|...|++. |.++... .||=.+.+++.. +.+.+.....+++|-++- +
T Consensus 393 L~~IArrvh~~T~~l~~~l~~a-ghel~~k--~fFDTLkI~~~~-------------s~~~~l~rA~~~~iNlr~---~- 452 (1001)
T KOG2040|consen 393 LKEIARRVHNLTLILAEGLKNA-GHELQHK--PFFDTLKIRCGC-------------SAEEVLDRAAKRQINLRL---V- 452 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-chhhccc--cccceEEEEecC-------------cHHHHHHHHHhhcCceEE---e-
Confidence 4456666667677788888876 6565542 377776666432 233334445555665554 1
Q ss_pred CCCCCcEEEEEec--CCcCcHHHHHHHHH
Q 041151 418 QKEGIFHLRTTIL--PAEEDMPAIMESFK 444 (463)
Q Consensus 418 ~~~~~~~lRis~~--~~~e~i~~~~~~l~ 444 (463)
..+.+=+++. .+++|++.++..+.
T Consensus 453 ---ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 ---EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ---ecCceEEeecccccHHHHHHHHHHHc
Confidence 1235778887 67789999988886
No 398
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=51.54 E-value=61 Score=30.41 Aligned_cols=83 Identities=12% Similarity=0.196 Sum_probs=51.9
Q ss_pred cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----cCcee--------cCCCccc-ChHHHHHHHHHHHHhcCCceeEEEE
Q 041151 132 LIFLTDGASKGVMQTLNCVIRGEGDGVVLL----FHTTW--------KRQQIGV-LIINDLQQSVAQARSKGITVRAMVI 198 (463)
Q Consensus 132 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp----~g~~~--------~~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l 198 (463)
+|++-.|++++-.++-... +.|. |+++ +|..+ .....++ |. +.+++.+++. +.++|+
T Consensus 2 ~ILvlgGTtE~r~la~~L~--~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~-~~l~~~l~~~-----~i~~vI- 71 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLA--EAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDE-EGLAEFLREN-----GIDAVI- 71 (249)
T ss_pred EEEEEechHHHHHHHHHHH--hcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCH-HHHHHHHHhC-----CCcEEE-
Confidence 5889999999887776655 5676 5554 66555 1223455 77 8888888764 566544
Q ss_pred ECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 199 INPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 199 ~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
....|- ..+--+.+.+.|++.|+..+
T Consensus 72 -DATHPf----A~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 72 -DATHPF----AAEISQNAIEACRELGIPYL 97 (249)
T ss_pred -ECCCch----HHHHHHHHHHHHhhcCcceE
Confidence 333442 22334556667777776555
No 399
>smart00642 Aamy Alpha-amylase domain.
Probab=46.62 E-value=53 Score=28.64 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
+.++++++++.|+++|+.||.|-+.-.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 568999999999999999999988654
No 400
>PRK09375 quinolinate synthetase; Provisional
Probab=42.33 E-value=65 Score=31.39 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=62.3
Q ss_pred cHHHHHHHHHHhhhcCC--CCCccCCCCCCHHHHHHHHHHHHHhcCCC----CCCCcEEEcCCcHHHHHHHHHHHhcCCC
Q 041151 82 PADAIARAKHYLSLTSG--GLGAYSDSRGIPGVRKEVAEFIERRDGYP----SDPELIFLTDGASKGVMQTLNCVIRGEG 155 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~----~~~~~i~~t~G~~~al~~~~~~l~~~~g 155 (463)
...+.+.+.+.-..... ..|.|-. ++. +.+|+|.+..+... -...++++..|..-.-..+ . ++ +|+
T Consensus 18 ~~~~~~~I~~lk~e~~a~ILaH~Yq~----~ei-q~~AD~~GDSl~Ls~~A~~~~a~~IvfcGV~FMaEtA-k-IL-~p~ 89 (319)
T PRK09375 18 KADLKERIKRLKKERNAVILAHYYQR----PEI-QDLADFTGDSLELARFAAETDADTIVFCGVHFMAETA-K-IL-SPE 89 (319)
T ss_pred hHHHHHHHHHHHHhcCcEEEEecCCC----HHH-HHHHHhhccHHHHHHHHHhCCCCEEEEecceehhhhH-H-hc-CCC
Confidence 34455555444333211 3466765 344 67788776554321 1235788888876433433 4 44 799
Q ss_pred CEEEEc---cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCC
Q 041151 156 DGVVLL---FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGN 203 (463)
Q Consensus 156 d~Vlvp---~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~N 203 (463)
.+|++| +|+.+ ....+. +.+++..++ .+.++++++-|.
T Consensus 90 k~VllP~~~AgC~m---Ad~~~~-~~i~~lk~~------~p~a~vVaYvNs 130 (319)
T PRK09375 90 KTVLLPDLEAGCSL---ADMCPA-EEFRAFKEA------HPDATVVTYVNT 130 (319)
T ss_pred CeEECCCCCCCCcc---cccCCH-HHHHHHHHH------CCCCEEEEEeCC
Confidence 999999 77655 334566 888887776 667887776543
No 401
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=39.73 E-value=2.8e+02 Score=25.56 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=50.9
Q ss_pred EEEcCCcHHHHHHHHHHHhcCCCCEEEE----c----------------------cCcee---cCCCcccChHHHHHHHH
Q 041151 133 IFLTDGASKGVMQTLNCVIRGEGDGVVL----L----------------------FHTTW---KRQQIGVLIINDLQQSV 183 (463)
Q Consensus 133 i~~t~G~~~al~~~~~~l~~~~gd~Vlv----p----------------------~g~~~---~~~~~~~d~~~~l~~~l 183 (463)
++..+||......+..+.- + -+.+.+ | .|..+ +.....-+-++.|.+.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l 81 (223)
T TIGR00290 4 AALISGGKDSCLALYHALK-E-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGIL 81 (223)
T ss_pred EEEecCcHHHHHHHHHHHH-h-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHH
Confidence 4567888888888888874 5 443322 1 12211 11111112225566666
Q ss_pred HHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 184 AQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 184 ~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
++. .+.+|+ +|.+.+..++..+-++|.+.|+..+
T Consensus 82 ~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 82 HTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 654 566666 7888888888888888888887665
No 402
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=38.60 E-value=3.4e+02 Score=29.01 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=54.5
Q ss_pred EEEcCCcHHHHHHHHHHHhcCCCCEEEE-c--------------cCceecCCCcccChHHHHHHHHHHHHhcCCceeEEE
Q 041151 133 IFLTDGASKGVMQTLNCVIRGEGDGVVL-L--------------FHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMV 197 (463)
Q Consensus 133 i~~t~G~~~al~~~~~~l~~~~gd~Vlv-p--------------~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~ 197 (463)
|+.|.||.. +..-+-+++ .+|-+++| | +|.....-+...+. ++-...++.... | ..++++
T Consensus 38 vmPTGgGKS-lCyQiPAll-~~G~TLVVSPLiSLM~DQV~~l~~~Gi~A~~lnS~l~~-~e~~~v~~~l~~-g-~~klLy 112 (590)
T COG0514 38 VMPTGGGKS-LCYQIPALL-LEGLTLVVSPLISLMKDQVDQLEAAGIRAAYLNSTLSR-EERQQVLNQLKS-G-QLKLLY 112 (590)
T ss_pred EccCCCCcc-hHhhhHHHh-cCCCEEEECchHHHHHHHHHHHHHcCceeehhhcccCH-HHHHHHHHHHhc-C-ceeEEE
Confidence 445666665 555555666 68987777 4 66555333444455 555555444321 1 578877
Q ss_pred EE--CCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccC
Q 041151 198 II--NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQ 240 (463)
Q Consensus 198 l~--~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~ 240 (463)
++ .-.|| .-++.|. +-.-..+++||||....|+
T Consensus 113 isPErl~~~-------~f~~~L~---~~~i~l~vIDEAHCiSqWG 147 (590)
T COG0514 113 ISPERLMSP-------RFLELLK---RLPISLVAIDEAHCISQWG 147 (590)
T ss_pred ECchhhcCh-------HHHHHHH---hCCCceEEechHHHHhhcC
Confidence 65 22444 2233333 3456889999999988783
No 403
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=37.74 E-value=1.2e+02 Score=25.77 Aligned_cols=55 Identities=27% Similarity=0.132 Sum_probs=40.2
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH-HHHHHHHHhhh-CCeEE-Eeccc
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA-NLREILRFCYQ-ENLVL-LGDEV 233 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~-~l~~l~~~a~~-~~~~v-i~Dea 233 (463)
.++ +.|.+.+++. .+..|++-.|.|..|...+.. ..++.++..++ .++.| +.||-
T Consensus 40 ~~~-~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDF-NALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhH-HHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 588 9999999987 899999999999999887754 35666665544 45444 34543
No 404
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=37.44 E-value=85 Score=29.23 Aligned_cols=56 Identities=14% Similarity=0.088 Sum_probs=37.0
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
..++. +.+.+.++.... +.++++|. +|.+.+.+.++.|.++.++++..+|+|=+..
T Consensus 41 ~~~~~-~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~ 96 (246)
T PF08543_consen 41 EPVDS-EMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMG 96 (246)
T ss_dssp EE--H-HHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---E
T ss_pred EECCH-HHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEecccc
Confidence 34455 666666665543 23789988 8999999999999999988888888875543
No 405
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=35.98 E-value=2.6e+02 Score=25.67 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=24.8
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
.+.+|+ +|.+.+..+...+-++|.+.|+..+
T Consensus 85 gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 85 DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 466666 7888888888888888888887665
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.38 E-value=77 Score=28.90 Aligned_cols=52 Identities=10% Similarity=0.127 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 175 IINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 175 ~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
. +.++++++. ..+++-+-.-+..+-.. .+..+++.++|++|++.+|+++-+.
T Consensus 24 ~-~~ve~al~~------Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 L-EWVEAALKG------GVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred H-HHHHHHHhC------CCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 6 788888887 67777666555544333 5667899999999999999887554
No 407
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=34.04 E-value=1.7e+02 Score=26.54 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=30.3
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
|. +.|.++++. ...|+++.+.+. .-..+....+++.|++.++..++
T Consensus 54 ~~-~~l~~al~g-------~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 54 DP-ESLVAALKG-------VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp -H-HHHHHHHTT-------CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred CH-HHHHHHHcC-------CceEEeecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 66 889888885 667777755442 22335678889999888766554
No 408
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.86 E-value=1.8e+02 Score=28.51 Aligned_cols=91 Identities=14% Similarity=0.245 Sum_probs=57.5
Q ss_pred CcHHHHHHHHHHHhcCCCCEEEEc-------------------cCceecCCCcccChHHHH-HHHHHHHHhcCCceeEEE
Q 041151 138 GASKGVMQTLNCVIRGEGDGVVLL-------------------FHTTWKRQQIGVLIINDL-QQSVAQARSKGITVRAMV 197 (463)
Q Consensus 138 G~~~al~~~~~~l~~~~gd~Vlvp-------------------~g~~~~~~~~~~d~~~~l-~~~l~~~~~~~~~~~~i~ 197 (463)
|=|-.|.-+...+. +.|..|++- .|+.+.....+-|+ .++ -++++....+ +...|+
T Consensus 151 GKTTTIaKLA~~l~-~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~Dp-AaVafDAi~~Akar--~~Dvvl 226 (340)
T COG0552 151 GKTTTIAKLAKYLK-QQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADP-AAVAFDAIQAAKAR--GIDVVL 226 (340)
T ss_pred chHhHHHHHHHHHH-HCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCc-HHHHHHHHHHHHHc--CCCEEE
Confidence 44677888888886 889888885 45555221245565 432 2333332222 678887
Q ss_pred EECC---CCCCccCCCHHHHHHHHHHhhhCC------eEEEeccccc
Q 041151 198 IINP---GNPTGQCLSEANLREILRFCYQEN------LVLLGDEVYQ 235 (463)
Q Consensus 198 l~~p---~NPtG~~~s~~~l~~l~~~a~~~~------~~vi~Deay~ 235 (463)
+... ||-+.-+ +||++|.+++++.. ++++.|..-.
T Consensus 227 iDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 227 IDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred EeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 7654 6665544 78999999998865 6666686543
No 409
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=33.78 E-value=4e+02 Score=24.92 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=18.1
Q ss_pred CCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 129 DPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 129 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
...+|++|.|+...-...- .. .++..+++
T Consensus 129 ~~~~iflttGsk~L~~f~~--~~-~~~~r~~~ 157 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFVP--AP-LPGERLFA 157 (249)
T ss_pred CCCCEEEeCchhhHHHHhh--cc-cCCCEEEE
Confidence 4479999999876444333 22 45566555
No 410
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=33.76 E-value=1.1e+02 Score=30.05 Aligned_cols=62 Identities=19% Similarity=0.173 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccccCCC
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDE 242 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~~~~~ 242 (463)
..+.+.+++...+ -+|+=+.++|.+ |...+.++..++++-+++.|+.|++|=-|+++.-+++
T Consensus 27 ~d~~~ilk~~G~N--~vRlRvwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg 88 (332)
T PF07745_consen 27 KDLFQILKDHGVN--AVRLRVWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPG 88 (332)
T ss_dssp --HHHHHHHTT----EEEEEE-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTT
T ss_pred CCHHHHHHhcCCC--eEEEEeccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCC
Confidence 3445555553111 245556667776 4678999999999999999999999999999865443
No 411
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=33.68 E-value=46 Score=32.66 Aligned_cols=28 Identities=7% Similarity=0.376 Sum_probs=24.5
Q ss_pred CCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 203 NPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 203 NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.+.|..+|.+|+++|++.|+++++-||-
T Consensus 66 ~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 66 GGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456789999999999999999999984
No 412
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=33.29 E-value=70 Score=25.08 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=28.1
Q ss_pred CCcEEEEEec-CCcCcHHHHHHHHHHHHHHHHHHh
Q 041151 421 GIFHLRTTIL-PAEEDMPAIMESFKKFNDEFMEQY 454 (463)
Q Consensus 421 ~~~~lRis~~-~~~e~i~~~~~~l~~~l~~~~~~~ 454 (463)
+...+.+.+. .+.++++++.+.+++++++..++|
T Consensus 77 ~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~~~~~~ 111 (111)
T PF07687_consen 77 DEATLTVDIRYPPGEDLEEIKAEIEAAVEKIAKKY 111 (111)
T ss_dssp SEEEEEEEEEESTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEEECCCcchHHHHHHHHHHHHHHhhhCC
Confidence 4456777777 788999999999999999988764
No 413
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=33.27 E-value=3.6e+02 Score=24.81 Aligned_cols=20 Identities=10% Similarity=0.084 Sum_probs=15.6
Q ss_pred ccCCCHHHHHHHHHHhhhCC
Q 041151 206 GQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 206 G~~~s~~~l~~l~~~a~~~~ 225 (463)
|..-++++++++++++++.+
T Consensus 173 g~nd~~~ei~~l~~~l~~l~ 192 (246)
T PRK11145 173 GWTDDDDSAHRLGEFIKDMG 192 (246)
T ss_pred CCCCCHHHHHHHHHHHHhcC
Confidence 45557789999999998764
No 414
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=33.26 E-value=2.3e+02 Score=26.55 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=53.9
Q ss_pred CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc----cCcee----cCCCccc-ChHHHHHHHHHHHHhcCCceeEEEEECC
Q 041151 131 ELIFLTDGASKGVMQTLNCVIRGEGDGVVLL----FHTTW----KRQQIGV-LIINDLQQSVAQARSKGITVRAMVIINP 201 (463)
Q Consensus 131 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp----~g~~~----~~~~~~~-d~~~~l~~~l~~~~~~~~~~~~i~l~~p 201 (463)
..|++-.|++++-.++-... +.|..|++. +|... ......+ |. +.+++.+++. +.++|+ ..
T Consensus 3 ~~IlvlgGT~egr~la~~L~--~~g~~v~~Svat~~g~~~~~~~~v~~G~l~~~-~~l~~~l~~~-----~i~~VI--DA 72 (248)
T PRK08057 3 PRILLLGGTSEARALARALA--AAGVDIVLSLAGRTGGPADLPGPVRVGGFGGA-EGLAAYLREE-----GIDLVI--DA 72 (248)
T ss_pred ceEEEEechHHHHHHHHHHH--hCCCeEEEEEccCCCCcccCCceEEECCCCCH-HHHHHHHHHC-----CCCEEE--EC
Confidence 36889999999887775543 567777775 44311 2334566 88 8899988875 667654 33
Q ss_pred CCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 202 GNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 202 ~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
..| +..+--+.+.+.|++.++..|
T Consensus 73 THP----fA~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 73 THP----YAAQISANAAAACRALGIPYL 96 (248)
T ss_pred CCc----cHHHHHHHHHHHHHHhCCcEE
Confidence 344 233334566677878776554
No 415
>KOG3055 consensus Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=33.24 E-value=3.5e+02 Score=24.11 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=53.1
Q ss_pred CcEEEcCCcHHHHHHHHHHHhcCCCCEEEEccCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCC
Q 041151 131 ELIFLTDGASKGVMQTLNCVIRGEGDGVVLLFHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLS 210 (463)
Q Consensus 131 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s 210 (463)
.-|++++.+.+|...++++. ..+-.| +.+++. +.-.+-++.- ..++|+.+ --.|.|. +.
T Consensus 62 HVImLGPn~~~AA~~ALh~~--Pg~LQv-----------GGGIN~-~Nc~~wl~eg-----ASkVIVTS-wlF~~g~-fd 120 (263)
T KOG3055|consen 62 HVIMLGPNSQAAAIGALHAY--PGGLQV-----------GGGINS-ENCMSWLEEG-----ASKVIVTS-WLFNNGK-FD 120 (263)
T ss_pred eEEEECCCcHHHHHHHHHhC--CCceee-----------cCccCh-HHHHHHHHhc-----CceEEEEE-EeccCCc-cc
Confidence 46788999999888888875 233344 788888 8877777761 34555444 2222455 58
Q ss_pred HHHHHHHHHHhhhCCeEEEecc
Q 041151 211 EANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~De 232 (463)
.++++.|.++|.+- .+++|-
T Consensus 121 L~RLk~i~s~~GKd--RlvvDl 140 (263)
T KOG3055|consen 121 LERLKDIVSIVGKD--RLVVDL 140 (263)
T ss_pred HHHHHHHHHHhCcc--eEEEEe
Confidence 89999999998763 344554
No 416
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=32.86 E-value=2e+02 Score=28.00 Aligned_cols=66 Identities=15% Similarity=0.134 Sum_probs=42.8
Q ss_pred cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 167 KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 167 ~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
...+..++. +++++.++.....-.+...|+++ -+=|.| ++.+...+|+++|++.+..+++|..-..
T Consensus 105 n~~Gp~is~-~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 105 NFPGPEISE-AELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred cCCCCCCCH-HHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHH
Confidence 344555666 77766665543212234555554 344444 4678899999999999999999976543
No 417
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=32.83 E-value=4.6e+02 Score=25.88 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=19.3
Q ss_pred CCCCCCcc----CCCHHHHHHHHHHhhhCCeEEEe
Q 041151 200 NPGNPTGQ----CLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 200 ~p~NPtG~----~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
-|.||+|. ..+.++++++.++.+++++.+.+
T Consensus 286 iPyn~~~~~~~~~ps~e~l~~f~~~l~~~gi~v~i 320 (342)
T PRK14454 286 IPVNEVKENGFKKSSKEKIKKFKNILKKNGIETTI 320 (342)
T ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 56666553 24566777777777776665544
No 418
>COG1313 PflX Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only]
Probab=32.03 E-value=1e+02 Score=29.48 Aligned_cols=55 Identities=16% Similarity=0.122 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHhcccceeccCCCCcCCCCCCcchhhhhhhhhcCCCcCCCCCCCCCCcHHHHHHHHHHhhhcCC--CC
Q 041151 23 RGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSG--GL 100 (463)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~~~~~~~~~~--~~ 100 (463)
..+++..+.+++..|-.-|||=.|+|+ |. .+.+++++..+..+.+. +.
T Consensus 151 ~e~La~i~~~~~~~GakNvN~Vgg~Pt-------------------------p~-----lp~Ile~l~~~~~~iPvvwNS 200 (335)
T COG1313 151 PEDLAEIILELRRHGAKNVNFVGGDPT-------------------------PH-----LPFILEALRYASENIPVVWNS 200 (335)
T ss_pred HHHHHHHHHHHHHhcCcceeecCCCCC-------------------------Cc-----hHHHHHHHHHHhcCCCEEEec
Confidence 346777777788888888999999998 55 67788888776665432 44
Q ss_pred CccCCCC
Q 041151 101 GAYSDSR 107 (463)
Q Consensus 101 ~~Y~~~~ 107 (463)
..|...+
T Consensus 201 nmY~s~E 207 (335)
T COG1313 201 NMYMSEE 207 (335)
T ss_pred CCccCHH
Confidence 5665543
No 419
>COG1509 KamA Lysine 2,3-aminomutase [Amino acid transport and metabolism]
Probab=31.11 E-value=5.4e+02 Score=25.56 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=64.7
Q ss_pred cCCCCC-CHHHHHHHHHHHHHhcCCCCCCC--cEEEcCC-----cHHHHHHHHHHHhcCCCCEEEE-ccCcee-cCCCcc
Q 041151 103 YSDSRG-IPGVRKEVAEFIERRDGYPSDPE--LIFLTDG-----ASKGVMQTLNCVIRGEGDGVVL-LFHTTW-KRQQIG 172 (463)
Q Consensus 103 Y~~~~g-~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G-----~~~al~~~~~~l~~~~gd~Vlv-p~g~~~-~~~~~~ 172 (463)
|....| ..+=.++.-+|+. -.|+ +|++|.| +...+..++..|. .=++|-+ -.|-++ ......
T Consensus 135 ~~~~~~~~~~~~~~al~YIa------~hPeI~eVllSGGDPL~ls~~~L~~ll~~L~--~IpHv~iiRi~TR~pvv~P~R 206 (369)
T COG1509 135 GQDNQGFNKEEWDKALDYIA------AHPEIREVLLSGGDPLSLSDKKLEWLLKRLR--AIPHVKIIRIGTRLPVVLPQR 206 (369)
T ss_pred ccccccCCHHHHHHHHHHHH------cCchhheEEecCCCccccCHHHHHHHHHHHh--cCCceeEEEeecccceechhh
Confidence 333444 4455556667776 4555 8998887 6777888888774 2233322 133333 223333
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccc
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEV 233 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Dea 233 (463)
++ ++|.+.+++ ..+-|+++ +.|.|--. +. +..+-++.+++.|+.+..=.+
T Consensus 207 It--~~L~~~l~~------~~~~v~~~tH~NHp~Ei--t~-e~~~A~~~L~~aGv~l~NQsV 257 (369)
T COG1509 207 IT--DELCEILGK------SRKPVWLVTHFNHPNEI--TP-EAREACAKLRDAGVPLLNQSV 257 (369)
T ss_pred cc--HHHHHHHhc------cCceEEEEcccCChhhc--CH-HHHHHHHHHHHcCceeecchh
Confidence 43 677777776 34555555 77777443 43 455555666677888875444
No 420
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair]
Probab=30.35 E-value=80 Score=31.73 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHhhhC-----CeEEEecccccccccCCCCCccchHHHHHhcCCCCCCCceEEEEecCCc
Q 041151 208 CLSEANLREILRFCYQE-----NLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSK 273 (463)
Q Consensus 208 ~~s~~~l~~l~~~a~~~-----~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 273 (463)
+-...+++++++-+++. ..++++||+|.. +....-. ++|. -+++.++.++..+-
T Consensus 83 ~~gvkdlr~i~e~a~~~~~~gr~tiLflDEIHRf----nK~QQD~---lLp~-----vE~G~iilIGATTE 141 (436)
T COG2256 83 TSGVKDLREIIEEARKNRLLGRRTILFLDEIHRF----NKAQQDA---LLPH-----VENGTIILIGATTE 141 (436)
T ss_pred cccHHHHHHHHHHHHHHHhcCCceEEEEehhhhc----Chhhhhh---hhhh-----hcCCeEEEEeccCC
Confidence 34568899999888553 589999999985 3322222 2333 35557777777664
No 421
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=30.33 E-value=45 Score=32.84 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=27.2
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
....|+..-++.|.|.+|+.+++.++.+.+.++|+.+-+
T Consensus 25 Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 25 GVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp TEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 567777778999999999999999999999999865543
No 422
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.16 E-value=49 Score=32.86 Aligned_cols=27 Identities=19% Similarity=0.527 Sum_probs=24.1
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
|.|..+|.+|+++|++.|+++|+-||-
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 446789999999999999999999884
No 423
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.98 E-value=1.2e+02 Score=24.66 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=26.2
Q ss_pred EEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 041151 424 HLRTTILPAEEDMPAIMESFKKFNDEFMEQ 453 (463)
Q Consensus 424 ~lRis~~~~~e~i~~~~~~l~~~l~~~~~~ 453 (463)
.+++-+..++|+-..+++.++.+++++-.+
T Consensus 121 iLelkYP~s~Eea~~~VnkI~~FL~sLe~~ 150 (152)
T COG4050 121 ILELKYPRSEEEAIDFVNKIANFLKSLEAQ 150 (152)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHHHHhhhhh
Confidence 478888888899999999999999998765
No 424
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=29.50 E-value=3.1e+02 Score=25.76 Aligned_cols=85 Identities=12% Similarity=0.100 Sum_probs=55.8
Q ss_pred cEEEcCCcHHHHHHHHHHHhcCCCCEEEEc---cCcee------cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCC
Q 041151 132 LIFLTDGASKGVMQTLNCVIRGEGDGVVLL---FHTTW------KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPG 202 (463)
Q Consensus 132 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp---~g~~~------~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~ 202 (463)
.|++-.|++++..++-..-. .+++.++.. +|..+ .....-.+. +.|.+.+++. ++++|+ ...
T Consensus 4 ~ilvlGGT~Dar~la~~L~~-~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~-e~l~~~l~e~-----~i~llI--DAT 74 (257)
T COG2099 4 RILLLGGTSDARALAKKLAA-APVDIILSSLTGYGAKLAEQIGPVRVGGFLGA-EGLAAFLREE-----GIDLLI--DAT 74 (257)
T ss_pred eEEEEeccHHHHHHHHHhhc-cCccEEEEEcccccccchhccCCeeecCcCCH-HHHHHHHHHc-----CCCEEE--ECC
Confidence 58888899998887777664 555666654 66665 233455677 9999998885 666554 334
Q ss_pred CCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 203 NPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 203 NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
.|--..+ -+..++.|++.|+..+
T Consensus 75 HPyAa~i----S~Na~~aake~gipy~ 97 (257)
T COG2099 75 HPYAARI----SQNAARAAKETGIPYL 97 (257)
T ss_pred ChHHHHH----HHHHHHHHHHhCCcEE
Confidence 4433333 3556678888877665
No 425
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=28.89 E-value=63 Score=34.60 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=29.0
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEeccccccc
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLGDEVYQQN 237 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~ 237 (463)
||-..=++++++++++.|.+.|+-||.|=+|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 3334446799999999999999999999999985
No 426
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=28.60 E-value=4.2e+02 Score=25.70 Aligned_cols=119 Identities=17% Similarity=0.162 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCC--cHHHHHHHHHHHhcCCCCEEEEccCcee--cCCCcccChHHHHHHH
Q 041151 107 RGIPGVRKEVAEFIERRDGYPSDPELIFLTDG--ASKGVMQTLNCVIRGEGDGVVLLFHTTW--KRQQIGVLIINDLQQS 182 (463)
Q Consensus 107 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G--~~~al~~~~~~l~~~~gd~Vlvp~g~~~--~~~~~~~d~~~~l~~~ 182 (463)
-|+-.+..+|+.+.... +..|.|++.+| +|.|-..+-.+.. .++..|+ |+.+ .......++ ..|.+.
T Consensus 162 lGyv~~a~Ei~~Q~~~~----~~fD~vVva~gs~gT~AGl~~g~~~~-~~~~~Vi---G~~v~~~~~~~~~qv-~~L~~~ 232 (323)
T COG2515 162 LGYVRLALEIAEQAEQL----LKFDSVVVAPGSGGTHAGLLVGLAQL-GPDVEVI---GIDVSADPEKLKEQV-LNLAQA 232 (323)
T ss_pred ccHHHHHHHHHHHHhhc----cCCCEEEEeCCCcchHHHHHHHhhhc-cCCCceE---EEeecCCHHHHHHHH-HHHHHH
Confidence 36677778888877532 45666666544 4444444434433 5666664 3322 111111111 222222
Q ss_pred HHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 183 VAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 183 l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
..+.-.-+.++.....+.-+.|-=.....+.++.+..+++..|+ +.|=+|..
T Consensus 233 ~a~~~~~~~~~~v~~~~dy~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtg 284 (323)
T COG2515 233 TAELLGLGSEADVLLSDDYHHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTG 284 (323)
T ss_pred HHHHcCCCCCceEEEEecccCCccCCcCHHHHHHHHHHHHhhCc--ccccccch
Confidence 11110001145666667666664344555666766666666665 56877754
No 427
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=27.56 E-value=1.5e+02 Score=27.53 Aligned_cols=54 Identities=19% Similarity=0.079 Sum_probs=39.4
Q ss_pred ccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe-EEEecccc
Q 041151 172 GVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL-VLLGDEVY 234 (463)
Q Consensus 172 ~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~-~vi~Deay 234 (463)
.++. +.+++.++...++- ++++|- +|.+.+.+.++.+++++++++. .|++|-+.
T Consensus 49 ~~~~-~~~~~q~~~~~~d~-~~~aik-------iG~l~~~~~~~~i~~~~~~~~~~~vVlDPv~ 103 (254)
T TIGR00097 49 PIPP-DFVEAQLDAVFSDI-PVDAAK-------TGMLASAEIVEAVARKLREYPVRPLVVDPVM 103 (254)
T ss_pred ECCH-HHHHHHHHHHHhCC-CCCEEE-------ECCcCCHHHHHHHHHHHHhcCCCcEEECCcc
Confidence 3455 66666655443322 577776 7999999999999999999988 68888664
No 428
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=27.45 E-value=1.4e+02 Score=29.52 Aligned_cols=25 Identities=12% Similarity=0.200 Sum_probs=14.3
Q ss_pred EEEEEec-CCcCcHHHHHHHHHHHHH
Q 041151 424 HLRTTIL-PAEEDMPAIMESFKKFND 448 (463)
Q Consensus 424 ~lRis~~-~~~e~i~~~~~~l~~~l~ 448 (463)
.++|.-. .+.+-+.+..+..++++.
T Consensus 245 s~KIeGR~k~~~yv~~v~~~yr~aid 270 (347)
T COG0826 245 SLKIEGRMKSIEYVARVVKAYRQAID 270 (347)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3566655 555566666665555544
No 429
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=27.33 E-value=61 Score=31.36 Aligned_cols=26 Identities=15% Similarity=0.402 Sum_probs=23.2
Q ss_pred CccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 205 TGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 205 tG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|..+|++|+++|++.|+++|+-||-
T Consensus 65 ~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 65 PGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred CCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 45689999999999999999998884
No 430
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=27.25 E-value=3e+02 Score=25.23 Aligned_cols=83 Identities=18% Similarity=0.180 Sum_probs=44.7
Q ss_pred EEEcCCcHHHHHHHHHHHhcCCCCEEEE----c----------------------cCcee---cCCCcccChHHHHHHHH
Q 041151 133 IFLTDGASKGVMQTLNCVIRGEGDGVVL----L----------------------FHTTW---KRQQIGVLIINDLQQSV 183 (463)
Q Consensus 133 i~~t~G~~~al~~~~~~l~~~~gd~Vlv----p----------------------~g~~~---~~~~~~~d~~~~l~~~l 183 (463)
++..+||......+..++- + -+.+.+ | .|..+ ...+..-+.+++|.+++
T Consensus 4 v~l~SGGKDS~lAl~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~~~l 81 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALR-Q-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLKEAL 81 (218)
T ss_dssp EEE--SSHHHHHHHHHHHH-T--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHH-h-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHHHHH
Confidence 5677899999999888874 5 433222 2 22222 11111222226666666
Q ss_pred HHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 184 AQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 184 ~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
++. ++.+++ +|.+.+..++..+-++|.+.|+..+
T Consensus 82 ~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 82 KEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp CTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 553 566666 7888888888888888888888766
No 431
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=27.06 E-value=4.1e+02 Score=22.84 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEE-EcCCcHHHHHHHHHHHh
Q 041151 111 GVRKEVAEFIERRDGYPSDPELIF-LTDGASKGVMQTLNCVI 151 (463)
Q Consensus 111 ~lr~~ia~~~~~~~g~~~~~~~i~-~t~G~~~al~~~~~~l~ 151 (463)
+.+++||+.-.+. +.+++++ +.+|++ ...+...|.
T Consensus 4 ~~K~~IA~~A~~~----I~~~~~Ifld~GtT--~~~la~~L~ 39 (161)
T PF00455_consen 4 EEKRAIARKAASL----IEDGDTIFLDSGTT--TLELAKYLP 39 (161)
T ss_pred HHHHHHHHHHHHh----CCCCCEEEEECchH--HHHHHHHhh
Confidence 3455555554333 4444333 334433 333444443
No 432
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=27.01 E-value=1.6e+02 Score=26.92 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=39.3
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC-CeEEEeccccc
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE-NLVLLGDEVYQ 235 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~vi~Deay~ 235 (463)
++. +.+++.++...++ .+.++|. +|.+.+.+..+.+.++++++ +..+++|-+..
T Consensus 51 ~~~-~~~~~~l~~~~~~-~~~~~i~-------~G~l~~~~~~~~i~~~~~~~~~~~vv~Dpv~~ 105 (242)
T cd01169 51 VPP-EFVAAQLDAVLED-IPVDAIK-------IGMLGSAEIIEAVAEALKDYPDIPVVLDPVMV 105 (242)
T ss_pred CCH-HHHHHHHHHHHhC-CCCCEEE-------ECCCCCHHHHHHHHHHHHhCCCCcEEECCcee
Confidence 455 6666666544322 2578887 58888899999999999987 88899986654
No 433
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=26.94 E-value=5.1e+02 Score=25.04 Aligned_cols=96 Identities=10% Similarity=0.083 Sum_probs=57.8
Q ss_pred CCCCcEEEcCCcHHHHHHHHHHHhcCCCC--EEEEc------cCcee----cCCCc---ccChHHHHHHHHHHHHhcCCc
Q 041151 128 SDPELIFLTDGASKGVMQTLNCVIRGEGD--GVVLL------FHTTW----KRQQI---GVLIINDLQQSVAQARSKGIT 192 (463)
Q Consensus 128 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd--~Vlvp------~g~~~----~~~~~---~~d~~~~l~~~l~~~~~~~~~ 192 (463)
+-.++|++|.|++..+...+..-. +.|. .|+|. .|-.. ...+- .+.. .++-..+.+ -
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~-kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~d-aaVfA~Msr------V 231 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAA-KKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPD-AAVFAMMSR------V 231 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHH-hccCceEEEEeecCCcccchHhhHHHHHcCCeeEEecc-HHHHHHhhh------c
Confidence 556899999999999998888876 5543 45553 22111 11111 2222 344444444 3
Q ss_pred eeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 193 VRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 193 ~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
-|+|+-+..--+.|.+....-...++..|++|-+.|++=
T Consensus 232 nKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~Vl 270 (353)
T KOG1465|consen 232 NKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVL 270 (353)
T ss_pred ceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEe
Confidence 466655566555666666666667777777887777753
No 434
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.80 E-value=4.4e+02 Score=25.42 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=20.4
Q ss_pred CCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 128 SDPELIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 128 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
+..+-|++|.||...=..+..-+. +.|-++++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa-~rg~~~vl 67 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFA-KRGAKLVL 67 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHH-HhCCeEEE
Confidence 566677788777655555566666 66765543
No 435
>PRK10785 maltodextrin glucosidase; Provisional
Probab=26.50 E-value=1.2e+02 Score=32.48 Aligned_cols=64 Identities=16% Similarity=0.228 Sum_probs=42.9
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECC-CCCCccCC-------------CHHHHHHHHHHhhhCCeEEEecccccc
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINP-GNPTGQCL-------------SEANLREILRFCYQENLVLLGDEVYQQ 236 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p-~NPtG~~~-------------s~~~l~~l~~~a~~~~~~vi~Deay~~ 236 (463)
++-|+ .-+.+.|.-..+ -.+.+|+|+-+ .+|+..-+ +.+++++|++.|+++|+.||.|-++-.
T Consensus 174 ~GGDl-~GI~~kLdYL~~--LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH 250 (598)
T PRK10785 174 YGGDL-DGISEKLPYLKK--LGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNH 250 (598)
T ss_pred cCcCH-HHHHHHHHHHHH--cCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 34577 777666542211 15788877722 33333211 568999999999999999999999865
Q ss_pred c
Q 041151 237 N 237 (463)
Q Consensus 237 ~ 237 (463)
.
T Consensus 251 ~ 251 (598)
T PRK10785 251 T 251 (598)
T ss_pred C
Confidence 4
No 436
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=26.34 E-value=51 Score=31.30 Aligned_cols=29 Identities=10% Similarity=0.204 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccc
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNI 238 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~ 238 (463)
+.++++++++.|+++|+.||.|-++-...
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhhccccccceEEEeeeccccc
Confidence 57899999999999999999999987643
No 437
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=26.30 E-value=2.1e+02 Score=27.45 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=29.3
Q ss_pred CCCCEEEEccCcee-----cCCCcccCh--HHHHHHHHHHHHhcCCceeEEEEECCCCCC
Q 041151 153 GEGDGVVLLFHTTW-----KRQQIGVLI--INDLQQSVAQARSKGITVRAMVIINPGNPT 205 (463)
Q Consensus 153 ~~gd~Vlvp~g~~~-----~~~~~~~d~--~~~l~~~l~~~~~~~~~~~~i~l~~p~NPt 205 (463)
..-|.|++|+|+.- .++=|.++. +..|..++.+. -|+....+|+||-|.|
T Consensus 95 ~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~---cP~A~i~vIsNPVNst 151 (345)
T KOG1494|consen 95 KGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC---CPNALILVISNPVNST 151 (345)
T ss_pred cCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh---CccceeEeecCccccc
Confidence 45699999977644 233344443 23444444443 2355666778998875
No 438
>TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit. This model describes the alpha subunit of sulfite reductase.
Probab=26.25 E-value=71 Score=32.30 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=29.5
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENL 226 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~ 226 (463)
..+..+....+-|.|..++.+++++|++++.+|+.
T Consensus 77 ~~~~~~tvRv~~P~G~~~tteqLR~LaDiaekYGs 111 (402)
T TIGR02064 77 GVAEFHTVRVAQPSGKFYSTDYLRQLCDVWEKYGS 111 (402)
T ss_pred CcCeEEEEEEecCCCCCCCHHHHHHHHHHHHHhCC
Confidence 45666666788899999999999999999999963
No 439
>smart00732 YqgFc Likely ribonuclease with RNase H fold. YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.
Probab=26.07 E-value=2.7e+02 Score=21.14 Aligned_cols=53 Identities=23% Similarity=0.202 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhh-CCeEE-Eeccccc
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQ-ENLVL-LGDEVYQ 235 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~-~~~~v-i~Deay~ 235 (463)
+.+.+.+.+. ++..|.+..|....|.....-+ ..+.++.++ +++.+ ++||+++
T Consensus 41 ~~l~~~i~~~-----~~~~i~Ig~pg~v~g~~~~~~~-~~l~~~l~~~~~~pv~~~nDa~s 95 (99)
T smart00732 41 ARLKKLIKKY-----QPDLIVIGLPLNMNGTASRETE-EAFAELLKERFNLPVVLVDERLA 95 (99)
T ss_pred HHHHHHHHHh-----CCCEEEEeCCcCCCCCcCHHHH-HHHHHHHHHhhCCcEEEEeCCcc
Confidence 7777777765 6888999999877787543333 555555543 44443 5566654
No 440
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=25.93 E-value=5.6e+02 Score=24.10 Aligned_cols=40 Identities=20% Similarity=0.250 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
+.+-+.+++. ..+.+++. -++.++.+++.+.|+++|+-.|
T Consensus 107 e~f~~~~~~a-----GvdGviip--------DLp~ee~~~~~~~~~~~gl~~I 146 (258)
T PRK13111 107 ERFAADAAEA-----GVDGLIIP--------DLPPEEAEELRAAAKKHGLDLI 146 (258)
T ss_pred HHHHHHHHHc-----CCcEEEEC--------CCCHHHHHHHHHHHHHcCCcEE
Confidence 5555555543 56666552 2455777788888888776555
No 441
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=25.82 E-value=2.1e+02 Score=26.29 Aligned_cols=113 Identities=14% Similarity=0.099 Sum_probs=62.3
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEc--cCcee--cCCCcccChHHH
Q 041151 103 YSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLL--FHTTW--KRQQIGVLIIND 178 (463)
Q Consensus 103 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp--~g~~~--~~~~~~~d~~~~ 178 (463)
+.|..|..+.++.+..+.. ...+.|.++.|-... +-..+. .+..+++. .+..+ +........ ..
T Consensus 14 ~~p~~~~~d~~~~~~~~~~------~g~~av~v~~~~~~~---~~~~~~--~~~~~i~~~~~~~~i~~p~~~~~~~~-~~ 81 (235)
T cd00958 14 FGPNPGLEDPEETVKLAAE------GGADAVALTKGIARA---YGREYA--GDIPLIVKLNGSTSLSPKDDNDKVLV-AS 81 (235)
T ss_pred CCCCccccCHHHHHHHHHh------cCCCEEEeChHHHHh---cccccC--CCCcEEEEECCCCCCCCCCCCchhhh-cC
Confidence 4677788888887777765 457788888774332 222221 12123322 22222 334444455 55
Q ss_pred HHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccc
Q 041151 179 LQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVY 234 (463)
Q Consensus 179 l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay 234 (463)
+++++.. ....|.+. +..... .-.-.+++.++.+.|+++++.+|+|...
T Consensus 82 v~~a~~~------Ga~~v~~~~~~~~~~-~~~~~~~i~~v~~~~~~~g~~~iie~~~ 131 (235)
T cd00958 82 VEDAVRL------GADAVGVTVYVGSEE-EREMLEELARVAAEAHKYGLPLIAWMYP 131 (235)
T ss_pred HHHHHHC------CCCEEEEEEecCCch-HHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 6666654 45544222 322111 1223347888888999999999996543
No 442
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=25.09 E-value=1.7e+02 Score=22.14 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=24.1
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
...+|+++.|+. .+..+..+-++.+++.++.++
T Consensus 25 ~~g~ivVTTPq~-----la~~dv~r~~~~~~~~~vpil 57 (81)
T PF10609_consen 25 IDGAIVVTTPQE-----LALADVRRAIDMFRKLNVPIL 57 (81)
T ss_dssp -SEEEEEE-CCC-------HHHHHHHHHHHHCTT-EEE
T ss_pred CCeEEEEeCCHH-----HHHHHHHHHHHHHHhcCCCcE
Confidence 367888899887 477889999999999987765
No 443
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=24.97 E-value=2.9e+02 Score=23.20 Aligned_cols=60 Identities=17% Similarity=0.021 Sum_probs=39.1
Q ss_pred cccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH-HHHHHHHHhhh-CC-eEEEecccccc
Q 041151 171 IGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA-NLREILRFCYQ-EN-LVLLGDEVYQQ 236 (463)
Q Consensus 171 ~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~-~l~~l~~~a~~-~~-~~vi~Deay~~ 236 (463)
...+. +.|.+.+++. ++..|++-.|-|+.|..-+.. ..++.++..++ ++ -+.++||-|..
T Consensus 39 ~~~~~-~~l~~~i~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 39 GTPDW-DRLEKLIKEW-----QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred CchHH-HHHHHHHHHh-----CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 33467 8899988886 789999999999888764322 23444444433 23 34557877653
No 444
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=24.88 E-value=40 Score=24.24 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=21.5
Q ss_pred EEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 197 VIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 197 ~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
+...+.-|.|.+ +.+++..|++++++|+
T Consensus 10 ~~v~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 10 YMVRIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEEEEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEEEEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 344455567887 8899999999999986
No 445
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=24.87 E-value=70 Score=31.30 Aligned_cols=27 Identities=4% Similarity=0.311 Sum_probs=23.8
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
+.+..+|.+|+++|++.|+++|+-||-
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vIP 100 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNIIP 100 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEec
Confidence 356789999999999999999998883
No 446
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=24.69 E-value=1.8e+02 Score=24.78 Aligned_cols=44 Identities=16% Similarity=0.264 Sum_probs=30.5
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
+. +++.+.+++. ..+-|+++-|... .++++++++.|+++++-+-
T Consensus 129 ~~-~~l~~~~~~~-----~id~v~ial~~~~------~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DL-DDLPELVREH-----DIDEVIIALPWSE------EEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -G-GGHHHHHHHH-----T--EEEE--TTS-------HHHHHHHHHHHHTTT-EEE
T ss_pred CH-HHHHHHHHhC-----CCCEEEEEcCccC------HHHHHHHHHHHHhCCCEEE
Confidence 56 8888888886 8899998877653 5789999999999987654
No 447
>PF02639 DUF188: Uncharacterized BCR, YaiI/YqxD family COG1671; InterPro: IPR003791 This entry describes proteins of unknown function.
Probab=24.56 E-value=2.4e+02 Score=23.51 Aligned_cols=28 Identities=14% Similarity=0.065 Sum_probs=16.8
Q ss_pred cEEEcCCcHHHHHHHHHHHhcCCCCEEEE
Q 041151 132 LIFLTDGASKGVMQTLNCVIRGEGDGVVL 160 (463)
Q Consensus 132 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 160 (463)
.+++...+.++....+...+ .+||.|++
T Consensus 30 ~~i~Vd~g~DaaD~~I~~~~-~~gDiVIT 57 (130)
T PF02639_consen 30 EMIVVDSGFDAADFYIVNHA-KPGDIVIT 57 (130)
T ss_pred EEEEECCCCChHHHHHHHcC-CCCCEEEE
Confidence 44444444555555555555 89999875
No 448
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=24.44 E-value=1.8e+02 Score=27.14 Aligned_cols=54 Identities=13% Similarity=0.069 Sum_probs=37.7
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCe-EEEeccccc
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENL-VLLGDEVYQ 235 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~-~vi~Deay~ 235 (463)
+|. +.+.+.++...++ .++++|. +|.+.+.+.++.+++++++++. .+++|-+..
T Consensus 56 ~~~-~~~~~q~~~~~~~-~~~~ai~-------iG~l~~~~~~~~i~~~~~~~~~~~vv~DPv~~ 110 (266)
T PRK06427 56 IPP-EFVAAQLDAVFSD-IRIDAVK-------IGMLASAEIIETVAEALKRYPIPPVVLDPVMI 110 (266)
T ss_pred CCH-HHHHHHHHHHHhc-CCCCEEE-------ECCcCCHHHHHHHHHHHHhCCCCCEEEcCccc
Confidence 455 6666655543222 2678887 7888888999999999988875 688886543
No 449
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=24.12 E-value=4.9e+02 Score=24.94 Aligned_cols=86 Identities=7% Similarity=-0.014 Sum_probs=50.2
Q ss_pred EEEcCCcHHHHHHHHHHHhcCCCCEEEEccCceecCCCcccChHHHHHHHHHHHHhcCCceeEEEEECC-CCCCccCCCH
Q 041151 133 IFLTDGASKGVMQTLNCVIRGEGDGVVLLFHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINP-GNPTGQCLSE 211 (463)
Q Consensus 133 i~~t~G~~~al~~~~~~l~~~~gd~Vlvp~g~~~~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p-~NPtG~~~s~ 211 (463)
|++|.++-+ +...+..++ .++-.|+... ..+-.-.|. +.+.+.+++. ++.+||=+-. .+.-..--.+
T Consensus 3 iLi~G~~Gq-LG~~L~~~l-~~~~~v~a~~----~~~~Ditd~-~~v~~~i~~~-----~PDvVIn~AAyt~vD~aE~~~ 70 (281)
T COG1091 3 ILITGANGQ-LGTELRRAL-PGEFEVIATD----RAELDITDP-DAVLEVIRET-----RPDVVINAAAYTAVDKAESEP 70 (281)
T ss_pred EEEEcCCCh-HHHHHHHHh-CCCceEEecc----CccccccCh-HHHHHHHHhh-----CCCEEEECccccccccccCCH
Confidence 555544333 444555554 4333343211 111233466 8899999886 7888765533 5655554443
Q ss_pred H--------HHHHHHHHhhhCCeEEEe
Q 041151 212 A--------NLREILRFCYQENLVLLG 230 (463)
Q Consensus 212 ~--------~l~~l~~~a~~~~~~vi~ 230 (463)
+ --..|+++|++.|+++|.
T Consensus 71 e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 71 ELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 3 236789999999988885
No 450
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.01 E-value=1.3e+02 Score=30.33 Aligned_cols=48 Identities=17% Similarity=0.310 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecc
Q 041151 177 NDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDE 232 (463)
Q Consensus 177 ~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~De 232 (463)
..|.+.+.... ++.++++++.-+- |..-+ .++++++|++.|+.|++|-
T Consensus 131 ~~ll~~~~~~l---~~~~~vVLSDY~K--G~L~~---~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 131 NKLLEKIKNAL---KSFDALVLSDYAK--GVLTN---VQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred HHHHHHHHHHh---hcCCEEEEecccc--ccchh---HHHHHHHHHHcCCcEEECC
Confidence 44444444421 2689999886543 55544 8899999999999999994
No 451
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=23.99 E-value=6.9e+02 Score=24.46 Aligned_cols=117 Identities=16% Similarity=0.206 Sum_probs=66.0
Q ss_pred ccCCCCCCHHHHHHHHH------HHHHhcCCCCCCCcEEEcC---C------cHHHHHHHHHHHhc--CCCCEEEEc---
Q 041151 102 AYSDSRGIPGVRKEVAE------FIERRDGYPSDPELIFLTD---G------ASKGVMQTLNCVIR--GEGDGVVLL--- 161 (463)
Q Consensus 102 ~Y~~~~g~~~lr~~ia~------~~~~~~g~~~~~~~i~~t~---G------~~~al~~~~~~l~~--~~gd~Vlvp--- 161 (463)
.|+... .+||-.|-+ .+-++|| ++.++|++-. . +...|..++.-|+. ++||..++.
T Consensus 72 NY~gTk--~ELrGCINDv~~M~~~Lv~rfG--Fs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~LvfHYSG 147 (362)
T KOG1546|consen 72 NYPGTK--NELRGCINDVHRMRKLLVERFG--FSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLVFHYSG 147 (362)
T ss_pred cCCCcH--HHHhhhHHHHHHHHHHHHHhhC--CChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEEEEecC
Confidence 455443 467655544 4445666 5566665421 1 12345555555542 689977776
Q ss_pred cCcee-cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhh-hCCeEEEeccccccccc
Q 041151 162 FHTTW-KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCY-QENLVLLGDEVYQQNIY 239 (463)
Q Consensus 162 ~g~~~-~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~-~~~~~vi~Deay~~~~~ 239 (463)
+|.+. ..++..+|- --..|+ -.=+|-.|.+++.|.-+.|++-.. .-.+.+|+|..|+....
T Consensus 148 HGtr~~~~~gDe~dG----------------~DE~I~-P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgli 210 (362)
T KOG1546|consen 148 HGTRQPDTNGDEVDG----------------YDETIV-PCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLI 210 (362)
T ss_pred CCCcCCCCCCCCCCC----------------Ccceee-cccccccccccchHHHHHHHhccCCCceEEEEeecccCCCcc
Confidence 67666 222222221 112222 123666788888888888777443 24678889998887655
No 452
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=23.55 E-value=1e+02 Score=23.10 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=20.8
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHH
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREIL 218 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~ 218 (463)
.+...++.-|.+|.| -+|.++|..++
T Consensus 50 t~~~~~lVlP~~P~~-~lse~~L~~va 75 (77)
T TIGR03793 50 SPTVLYLVLPVNPDI-ELTDEQLDAVA 75 (77)
T ss_pred CCCeEEEEecCCCCC-CCCHHHHHHhh
Confidence 455667778999999 89999988764
No 453
>PRK14467 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=23.38 E-value=7.3e+02 Score=24.54 Aligned_cols=103 Identities=8% Similarity=-0.006 Sum_probs=52.0
Q ss_pred HHHHHhcCCCCCCCcEEEc-CCcHHHHHHHHHHHhcCCCCEEEEc-cCcee------cCCCcccChHHHHHHHHHHHHhc
Q 041151 118 EFIERRDGYPSDPELIFLT-DGASKGVMQTLNCVIRGEGDGVVLL-FHTTW------KRQQIGVLIINDLQQSVAQARSK 189 (463)
Q Consensus 118 ~~~~~~~g~~~~~~~i~~t-~G~~~al~~~~~~l~~~~gd~Vlvp-~g~~~------~~~~~~~d~~~~l~~~l~~~~~~ 189 (463)
+.+.+..|+.+.+..|.+. +|-...|.....-.+ .+.-.+.+. +.... ........+ +.+.+++......
T Consensus 171 ~~l~~~~gl~~~~r~itvsT~G~~~~i~~l~~~~~-l~~v~LalSLha~~~e~r~~i~p~~~~~~l-~~l~~~~~~~~~~ 248 (348)
T PRK14467 171 QIMTSPWGLDLSKRRITISTSGIIHQIKRMAEDPV-MPEVNLAVSLNASSQKLRERIMPISKTNTL-EELMEVLKQYPLP 248 (348)
T ss_pred HHHcChhccCcCCCcEEEECCCChhHHHHHHhhcc-ccCeeEEEECCCCCHHHHHHhcCCccccCH-HHHHHHHHHHHHh
Confidence 3333445777777777775 454544443332111 123233344 22111 111223455 7777776533211
Q ss_pred CCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCC
Q 041151 190 GITVRAMVIINPGNPTGQCLSEANLREILRFCYQEN 225 (463)
Q Consensus 190 ~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~ 225 (463)
.-+-|++..|-=| |..-+.+++++|+++++..+
T Consensus 249 --~g~~V~ieyvLIp-GvNDs~e~a~~La~~l~~l~ 281 (348)
T PRK14467 249 --PGRRIMLEYVLIK-GVNDSPEDALRLAQLIGKNK 281 (348)
T ss_pred --cCCeEEEEEEEEC-CccCCHHHHHHHHHHHhcCC
Confidence 1223344444333 66678899999999998753
No 454
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally.
Probab=23.31 E-value=2.8e+02 Score=25.92 Aligned_cols=108 Identities=19% Similarity=0.289 Sum_probs=59.4
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCCCEEEEcc--Ccee-cCCCcccChHHHHHH
Q 041151 105 DSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLLF--HTTW-KRQQIGVLIINDLQQ 181 (463)
Q Consensus 105 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlvp~--g~~~-~~~~~~~d~~~~l~~ 181 (463)
|..+..++++.+.+... ...+.|++++|-..... ... ..+-.++++. +... .......-. ..+++
T Consensus 31 p~~~~~~~~~~~~~a~~------~~~~~v~~~p~~~~~~~---~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~-~~v~~ 98 (258)
T TIGR01949 31 PIKGLVDIRKTVNEVAE------GGADAVLLHKGIVRRGH---RGY--GKDVGLIIHLSASTSLSPDPNDKRIV-TTVED 98 (258)
T ss_pred CCCCcCCHHHHHHHHHh------cCCCEEEeCcchhhhcc---ccc--CCCCcEEEEEcCCCCCCCCCCcceee-eeHHH
Confidence 45567777777777765 45678888887544321 112 3344455552 2111 111111223 55777
Q ss_pred HHHHHHhcCCceeEEEEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEec
Q 041151 182 SVAQARSKGITVRAMVII-NPGNPTGQCLSEANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D 231 (463)
+++. ....|-+. +... .+..--.+++.++.+.|+++|+.++++
T Consensus 99 al~~------Ga~~v~~~~~~g~-~~~~~~~~~~~~i~~~~~~~g~~liv~ 142 (258)
T TIGR01949 99 AIRM------GADAVSIHVNVGS-DTEWEQIRDLGMIAEICDDWGVPLLAM 142 (258)
T ss_pred HHHC------CCCEEEEEEecCC-chHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 7765 55555443 4222 221122257888889999999888873
No 455
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=23.27 E-value=83 Score=30.60 Aligned_cols=25 Identities=12% Similarity=0.429 Sum_probs=22.6
Q ss_pred ccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 206 GQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 206 G~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
|..+|.+++++|++.|+++|+-||-
T Consensus 62 ~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 62 GLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEE
Confidence 5679999999999999999998884
No 456
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=23.10 E-value=1.5e+02 Score=24.67 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=23.0
Q ss_pred EEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 424 HLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 424 ~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+-+.+..++++...++.++++|++++
T Consensus 117 iLel~YP~~~ee~~~~V~~I~~FL~~L 143 (143)
T PF09885_consen 117 ILELKYPTNEEEAIDFVNKINDFLKSL 143 (143)
T ss_pred eEEeeCCCChHHHHHHHHHHHHHHhcC
Confidence 467788888899999999999999763
No 457
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=23.09 E-value=1.4e+02 Score=30.01 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=32.4
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.+..|+..-++-|.|.+|+.++++++.+.+.++|+.+-+
T Consensus 23 G~~giV~al~~~p~gevW~~~~i~~~k~~ie~~GL~~~v 61 (394)
T TIGR00695 23 GATGIVTALHHIPNGEVWEKEEIRKRKEYIESAGLHWSV 61 (394)
T ss_pred CCcceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 577777667788999999999999999999999765544
No 458
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=22.98 E-value=7.7e+02 Score=24.62 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEcCCcHHHHHHHHHHHhcCCC-C-EEEEc-cCcee-------cCCCcccChHHHHHH
Q 041151 112 VRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEG-D-GVVLL-FHTTW-------KRQQIGVLIINDLQQ 181 (463)
Q Consensus 112 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d-~Vlvp-~g~~~-------~~~~~~~d~~~~l~~ 181 (463)
+.+.+.-.-....++.+....|-+++.+ +.--+..|. +.| + .+.+. ++... +......++ ++|.+
T Consensus 192 v~~~i~~l~~~~~~~~is~r~ItisT~G---l~~~i~~L~-~~gl~~~LaiSL~a~~~e~r~~i~P~~~~~~~l-~~l~~ 266 (368)
T PRK14456 192 VFEAVLTLSTRKYRFSISQRKITISTVG---ITPEIDRLA-TSGLKTKLAVSLHSADQEKRERLMPQAARDYPL-DELRE 266 (368)
T ss_pred HHHHHHHHhccccccCcCcCeeEEECCC---ChHHHHHHH-HcCCCceEEEEecCCCHHHHHHhccccCCCCCH-HHHHH
Confidence 5544443322124455666778665543 222345555 555 2 56665 33222 333335677 88888
Q ss_pred HHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 182 SVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 182 ~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
.+....... .+-|.+..+--| |..-+.+++.+|++++++.
T Consensus 267 ~i~~~~~~~--g~~V~ieyvLI~-GvNDs~eda~~L~~~l~~~ 306 (368)
T PRK14456 267 ALIGYASKT--GEPVTLVYMLLE-GINDSPEDARKLIRFASRF 306 (368)
T ss_pred HHHHHHHhc--CCeEEEEEEEEc-CCCCCHHHHHHHHHHHhcC
Confidence 887543332 223444444333 6667889999999999886
No 459
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=22.89 E-value=88 Score=32.16 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=23.7
Q ss_pred CCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 204 PTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 204 PtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
+.+..+|.+|+++|++.|+++++-||-
T Consensus 89 ~~~g~YT~~di~eiv~yA~~rgI~VIP 115 (445)
T cd06569 89 SGSGYYSRADYIEILKYAKARHIEVIP 115 (445)
T ss_pred ccCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 446689999999999999999999884
No 460
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=22.77 E-value=2.3e+02 Score=19.99 Aligned_cols=44 Identities=16% Similarity=0.280 Sum_probs=26.5
Q ss_pred cChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEE
Q 041151 173 VLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLL 229 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi 229 (463)
..+ +++-+...+. +.+++.++.-+|..|.. ++.++++++++.+|
T Consensus 15 ~~~-~~~~~~a~~~-----g~~~v~iTDh~~~~~~~-------~~~~~~~~~gi~~i 58 (67)
T smart00481 15 LSP-EELVKRAKEL-----GLKAIAITDHGNLFGAV-------EFYKAAKKAGIKPI 58 (67)
T ss_pred CCH-HHHHHHHHHc-----CCCEEEEeeCCcccCHH-------HHHHHHHHcCCeEE
Confidence 445 5555555443 68888888777665542 34445556776665
No 461
>PRK12412 pyridoxal kinase; Reviewed
Probab=22.62 E-value=1.1e+02 Score=28.90 Aligned_cols=52 Identities=17% Similarity=0.102 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeE-EEecccc
Q 041151 174 LIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLV-LLGDEVY 234 (463)
Q Consensus 174 d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~-vi~Deay 234 (463)
+. +.+++.++...++- ++++|. +|.+.+.+.++.+++++++++.. +++|-+-
T Consensus 56 ~~-~~i~~q~~~l~~d~-~~~~ik-------iG~l~~~~~v~~i~~~~~~~~~~~vv~DPv~ 108 (268)
T PRK12412 56 PA-STLKPQLETTIEGV-GVDALK-------TGMLGSVEIIEMVAETIEKHNFKNVVVDPVM 108 (268)
T ss_pred CH-HHHHHHHHHHHhCC-CCCEEE-------ECCCCCHHHHHHHHHHHHhcCCCCEEECcCe
Confidence 44 55555544332211 467776 78888888899999998888765 7777553
No 462
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=22.54 E-value=2e+02 Score=25.13 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=28.4
Q ss_pred EEE-CCCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 197 VII-NPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 197 ~l~-~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
.++ +..||| .++-+++-+++.-+..-.++|++|+.=.
T Consensus 27 CIS~S~GNPT--~lsG~elV~lIk~a~~DPV~VMfDD~G~ 64 (180)
T PF14097_consen 27 CISQSAGNPT--PLSGEELVELIKQAPHDPVLVMFDDKGF 64 (180)
T ss_pred EEeccCCCCC--cCCHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 355 778896 5677888888887776689999998643
No 463
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=22.46 E-value=66 Score=31.03 Aligned_cols=28 Identities=18% Similarity=0.301 Sum_probs=22.6
Q ss_pred HHHHHHHHHhh-hCCeEEEeccccccccc
Q 041151 212 ANLREILRFCY-QENLVLLGDEVYQQNIY 239 (463)
Q Consensus 212 ~~l~~l~~~a~-~~~~~vi~Deay~~~~~ 239 (463)
..+++|++||. .++..||.||+|..-..
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~akn~ 187 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAKNL 187 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcCCC
Confidence 46899999994 46899999999976433
No 464
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=21.96 E-value=68 Score=31.53 Aligned_cols=24 Identities=8% Similarity=0.396 Sum_probs=21.2
Q ss_pred cCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 207 QCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 207 ~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
..+|.+|+++|++.|+++|+-||-
T Consensus 68 ~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 68 GYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp SEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred ccCCHHHHHHHHHHHHHcCCceee
Confidence 389999999999999999999884
No 465
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=21.78 E-value=1.1e+02 Score=29.87 Aligned_cols=61 Identities=10% Similarity=0.170 Sum_probs=38.9
Q ss_pred CcccChHHHHHHHHHHHHhcCCceeEEEEE-CCCCCCccCCCHH---HHHHHHHHhhhCCeEEEec
Q 041151 170 QIGVLIINDLQQSVAQARSKGITVRAMVII-NPGNPTGQCLSEA---NLREILRFCYQENLVLLGD 231 (463)
Q Consensus 170 ~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~-~p~NPtG~~~s~~---~l~~l~~~a~~~~~~vi~D 231 (463)
-+.+.. +.+++.|++....|-++-.+++- +-|.|.=-.+.-+ ++.+.+++|++++++||.-
T Consensus 18 y~r~p~-~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 18 YFRIPP-EYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp GGGS-G-GGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEEEE
T ss_pred cccCCh-hHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEEec
Confidence 344556 77777777766667677777775 6677765555443 7999999999999999864
No 466
>PRK03906 mannonate dehydratase; Provisional
Probab=21.69 E-value=1.4e+02 Score=30.02 Aligned_cols=39 Identities=10% Similarity=-0.035 Sum_probs=32.7
Q ss_pred ceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 192 TVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 192 ~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.+..|+..-++-|.|.+|+.+++.++.+.+.++|+-+-+
T Consensus 23 G~~~iv~~l~~~~~g~~W~~~~i~~~~~~ie~~Gl~~~v 61 (385)
T PRK03906 23 GATGIVTALHDIPVGEVWPVEEILARKAEIEAAGLEWSV 61 (385)
T ss_pred CCCceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 677777667889999999999999999999998765443
No 467
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=21.53 E-value=85 Score=31.05 Aligned_cols=26 Identities=8% Similarity=0.341 Sum_probs=23.2
Q ss_pred CccCCCHHHHHHHHHHhhhCCeEEEe
Q 041151 205 TGQCLSEANLREILRFCYQENLVLLG 230 (463)
Q Consensus 205 tG~~~s~~~l~~l~~~a~~~~~~vi~ 230 (463)
.|..+|.+|+++|++.|+++++-||-
T Consensus 63 ~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 63 PSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred CCceECHHHHHHHHHHHHHcCCEEEE
Confidence 35678999999999999999999884
No 468
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=21.43 E-value=3.9e+02 Score=25.97 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=55.5
Q ss_pred cHHHHHHHHHHhhhcCC--CCCccCCCCCCHHHHHHHHHHHHHhcC-----CCCCCCcEEEcCCcHHHHHHHHHHHhcCC
Q 041151 82 PADAIARAKHYLSLTSG--GLGAYSDSRGIPGVRKEVAEFIERRDG-----YPSDPELIFLTDGASKGVMQTLNCVIRGE 154 (463)
Q Consensus 82 p~~~~~a~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g-----~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 154 (463)
.....+++.+..+.-+. ..+.|.. ++..+ +|+|.+..+. ...+ .++++..|.. .+.=....| +|
T Consensus 20 ~~~l~~~I~~Lk~e~navILAH~Yq~----peIq~-iAD~vGDSL~LAr~A~~~~-Ad~IVf~GV~-FMaETAkiL--nP 90 (324)
T COG0379 20 DADLKEEIKRLKKERNAVILAHNYQR----PEIQD-IADFVGDSLELAREAAKTD-ADTIVFAGVH-FMAETAKIL--NP 90 (324)
T ss_pred hHHHHHHHHHHHHhcCcEEEEecCCC----HHHHH-HHHhhccHHHHHHHHhhCC-CCEEEEecee-ehHhhHhhc--CC
Confidence 55666666655544211 3466654 45555 8888765442 2334 6888888865 344445555 79
Q ss_pred CCEEEEc---cCceecCCCcccChHHHHHHHHHH
Q 041151 155 GDGVVLL---FHTTWKRQQIGVLIINDLQQSVAQ 185 (463)
Q Consensus 155 gd~Vlvp---~g~~~~~~~~~~d~~~~l~~~l~~ 185 (463)
..+|++| +|+.+ ...++. +.+.+.-..
T Consensus 91 eK~VL~Pd~~AgCsm---A~~~~~-~~~~~~~~~ 120 (324)
T COG0379 91 EKTVLLPDLEAGCSM---ADMITA-EEVRAFKEK 120 (324)
T ss_pred CCeEecCCCCCCCCc---ccCCCH-HHHHHHHHH
Confidence 9999999 66544 445667 777777544
No 469
>PLN03244 alpha-amylase; Provisional
Probab=21.39 E-value=1.1e+02 Score=33.73 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=33.0
Q ss_pred ECCCCCCccCCCHHHHHHHHHHhhhCCeEEEecccccccc
Q 041151 199 INPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNI 238 (463)
Q Consensus 199 ~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~~~~ 238 (463)
+++--|+...-++++++++++.|++.|+-||.|-+|..+.
T Consensus 428 t~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~ 467 (872)
T PLN03244 428 TNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAA 467 (872)
T ss_pred CcccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCC
Confidence 3455556666678999999999999999999999998753
No 470
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=21.37 E-value=5.8e+02 Score=24.38 Aligned_cols=56 Identities=21% Similarity=0.150 Sum_probs=36.9
Q ss_pred cChHHHHHHHHHHHHh--cCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC-----CeEEEecccccc
Q 041151 173 VLIINDLQQSVAQARS--KGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE-----NLVLLGDEVYQQ 236 (463)
Q Consensus 173 ~d~~~~l~~~l~~~~~--~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~-----~~~vi~Deay~~ 236 (463)
+.. +.+.+.++...+ .....++|+ ||..-|.++.+.|+++.++. ++++++|=+..+
T Consensus 53 ~~~-e~l~~~l~~l~~~~~~~~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 53 MPP-EQLADLLNGLEAIDKLGECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred CCH-HHHHHHHHHHHhcccccccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 344 666666665443 224577877 78888888888888776553 566777766554
No 471
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.25 E-value=1.9e+02 Score=24.02 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=23.1
Q ss_pred EEEEEecCCcCcHHHHHHHHHHHHHHH
Q 041151 424 HLRTTILPAEEDMPAIMESFKKFNDEF 450 (463)
Q Consensus 424 ~lRis~~~~~e~i~~~~~~l~~~l~~~ 450 (463)
.+.+-+..++++...++.++.+|++++
T Consensus 116 iLEl~YP~~~e~~~~~V~~i~~FL~~l 142 (142)
T TIGR03271 116 ILELDYPTSEEEGIIFVRKINDFLDSL 142 (142)
T ss_pred eEEeeCCCChhHHHHHHHHHHHHHhcC
Confidence 577888888899999999999999753
No 472
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=21.13 E-value=1.6e+02 Score=24.68 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=43.1
Q ss_pred cCCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHH-HHHHHHHHhhh-C-CeE-EEecccccc
Q 041151 167 KRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEA-NLREILRFCYQ-E-NLV-LLGDEVYQQ 236 (463)
Q Consensus 167 ~~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~-~l~~l~~~a~~-~-~~~-vi~Deay~~ 236 (463)
...+...+. +.|.+.+++. ++..|++-.|-|..|..-+.. ...+.++.+++ + ++. .++||-|..
T Consensus 32 ~~~~~~~~~-~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 32 PRRNREKDI-EELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp EECCCCCCH-HHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred ECCCCchHH-HHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 344456788 9999999986 799999999988877654432 34444444433 3 554 458888764
No 473
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.09 E-value=4.2e+02 Score=22.41 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCceeEEEEECCCCC-CccCCCHHH----HHHHHHHhhhCCeEEE
Q 041151 179 LQQSVAQARSKGITVRAMVIINPGNP-TGQCLSEAN----LREILRFCYQENLVLL 229 (463)
Q Consensus 179 l~~~l~~~~~~~~~~~~i~l~~p~NP-tG~~~s~~~----l~~l~~~a~~~~~~vi 229 (463)
+++.++...+..+.+++|+++-|..+ .+. ...+. -+.+.++|+++++.+|
T Consensus 74 l~~li~~~~~~~~~~~vi~~~~~p~~~~~~-~~~~~~~~~n~~l~~~a~~~~~~~i 128 (169)
T cd01828 74 YRTILEKLRKHFPNIKIVVQSILPVGELKS-IPNEQIEELNRQLAQLAQQEGVTFL 128 (169)
T ss_pred HHHHHHHHHHHCCCCeEEEEecCCcCccCc-CCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 33333333332346787777644222 222 12222 2345667777787666
No 474
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=21.07 E-value=2.5e+02 Score=20.00 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=23.6
Q ss_pred eeEEEEECCCCCCccCCC-HHHHHHHHHHhhhCCeEEEec
Q 041151 193 VRAMVIINPGNPTGQCLS-EANLREILRFCYQENLVLLGD 231 (463)
Q Consensus 193 ~~~i~l~~p~NPtG~~~s-~~~l~~l~~~a~~~~~~vi~D 231 (463)
...+++.+|.-. ++ .+++++|.++..+=|-+||.|
T Consensus 35 ~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 35 DGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 345555566522 44 488999999998777777764
No 475
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=20.91 E-value=88 Score=32.46 Aligned_cols=29 Identities=10% Similarity=0.192 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHhhhCCeEEEecccccccc
Q 041151 210 SEANLREILRFCYQENLVLLGDEVYQQNI 238 (463)
Q Consensus 210 s~~~l~~l~~~a~~~~~~vi~Deay~~~~ 238 (463)
+.+++++|++.|+++|+.||.|-++-...
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 57899999999999999999999987653
No 476
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=20.73 E-value=83 Score=33.80 Aligned_cols=27 Identities=15% Similarity=0.348 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhhCCeEEEeccccccc
Q 041151 211 EANLREILRFCYQENLVLLGDEVYQQN 237 (463)
Q Consensus 211 ~~~l~~l~~~a~~~~~~vi~Deay~~~ 237 (463)
.++++++++.|+++|+-||.|-+|-..
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 589999999999999999999999764
No 477
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=20.44 E-value=1e+02 Score=21.80 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=21.8
Q ss_pred CCCCCccCCCHHHHHHHHHHhhhCCeEEEeccccc
Q 041151 201 PGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQ 235 (463)
Q Consensus 201 p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~Deay~ 235 (463)
|..|.+..++.++++..++-..+-+.+.+.+..|.
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Yk 59 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSYK 59 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEEe
Confidence 44567888899999999887777787777777663
No 478
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=20.16 E-value=3.2e+02 Score=21.55 Aligned_cols=53 Identities=19% Similarity=0.276 Sum_probs=31.9
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCcEEEEEec---C----CcCcHH-HHHHHHHHHHHHHHHHhc
Q 041151 399 CLRLLEATGISTVPGSGFGQKEGIFHLRTTIL---P----AEEDMP-AIMESFKKFNDEFMEQYE 455 (463)
Q Consensus 399 ~~~ll~~~gI~v~pg~~f~~~~~~~~lRis~~---~----~~e~i~-~~~~~l~~~l~~~~~~~~ 455 (463)
....|.++||.+.|-..-.. | .+..+.. . +++++. +..++|.+.+.+..+..+
T Consensus 40 a~~~L~~rGi~~~PD~~~Na--G--Gvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~~a~ 100 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANA--G--GVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFETAQ 100 (102)
T ss_pred HHHHHHHCCCEEcCcceecC--C--CEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56778999999999554432 1 2444443 1 333343 666667777776666544
No 479
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=20.07 E-value=3.3e+02 Score=25.97 Aligned_cols=53 Identities=13% Similarity=0.193 Sum_probs=33.3
Q ss_pred CCCcccChHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhC
Q 041151 168 RQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQE 224 (463)
Q Consensus 168 ~~~~~~d~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~ 224 (463)
..+..+|. +.+++.++...+. ..+.|+++ -++--+..+|.+|+.++++.+.+.
T Consensus 14 ~~dg~iD~-~~l~~~i~~l~~~--Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 14 KEDGSVDF-AALRKLVDYLIAN--GTDGLVVV-GTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CCCCCcCH-HHHHHHHHHHHHc--CCCEEEEC-CcCCccccCCHHHHHHHHHHHHHH
Confidence 34567788 8887777655433 46666553 333335677888888887766553
No 480
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=20.05 E-value=4e+02 Score=27.50 Aligned_cols=125 Identities=17% Similarity=0.115 Sum_probs=72.5
Q ss_pred CCCCCHHHHHHHHHHHHHhcCC-----------CCCCCcEEEcCCcHHHHHHHHHHHhc-CCCCEEEE-c-----cCcee
Q 041151 105 DSRGIPGVRKEVAEFIERRDGY-----------PSDPELIFLTDGASKGVMQTLNCVIR-GEGDGVVL-L-----FHTTW 166 (463)
Q Consensus 105 ~~~g~~~lr~~ia~~~~~~~g~-----------~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv-p-----~g~~~ 166 (463)
..++-.+|++.|-+|+.+...+ .+...++++|-|++..+..++..--+ .+.-.|+| + .|.+.
T Consensus 323 e~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~ 402 (556)
T KOG1467|consen 323 ESEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKL 402 (556)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHH
Confidence 3445567777777777655432 24556899999999999887776531 23334444 3 23222
Q ss_pred ----cCCCcccC--hHHHHHHHHHHHHhcCCceeEEEEECCCCCCccCCCHHHHHHHHHHhhhCCeEEEec-cccc
Q 041151 167 ----KRQQIGVL--IINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGD-EVYQ 235 (463)
Q Consensus 167 ----~~~~~~~d--~~~~l~~~l~~~~~~~~~~~~i~l~~p~NPtG~~~s~~~l~~l~~~a~~~~~~vi~D-eay~ 235 (463)
...+.... .|..+.-.+.+ -+++++=++.---.|.++++.--..++=.+++||+.||+= |+|-
T Consensus 403 lr~Lv~~GinctYv~I~a~syim~e------vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 403 LRRLVDRGINCTYVLINAASYIMLE------VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHHHcCCCeEEEEehhHHHHHHh------cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 11121111 01223223333 3454433455444599999888888888889999988864 4443
Done!