Citrus Sinensis ID: 041157

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
ENAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRVKSSSDLKVCSANEVTLSTLLPR
Secondary Structure (PSIPRED)
cHHHHHHHEEEEEcccccccccccccccEEEEEccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccEEEccccccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHcHHHHHcccccHHHHEEccEEEEcccEEEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEcHcHcccccHHHHHHHHHHHHHEHcccHcccccHHHHHEEccccccccccccccEEEEEcccccccccccEcccEEEEEEccc
Coil and Loop (DISEMBL)
ENAKQKVLQFLRsgegrtgdddegysynilrgnkkvesqelplfpldLIHEATrnfsnenklgeggfgpvykTWKLWCEGNvqelmdpvlkeSFILEEILKRIHIGLLcvqedpadrptmSSVVVMLATdtitlpqptqpafsvgrvksssdlkvcsanevtlstllpr
Flexible Loop (DISEMBL)
enakqkvlqflrsgegrtgdddegysYNILRGNKKVESQELPLFPLDLIHEATRNfsnenklgeggFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTitlpqptqpafsvgrvksssdlkvcsanevtlstllpr
Low Complexity Region (SEG)
ENAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRVKSSSDLKVCSANEVTLSTLLPR
Disordered region (IsUnstruct)
*************************SYNILRGN**V**QELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDP****TMSSVVVMLATDTITL***********************************
Disordered Region (DISOPRED)
*************************SYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPA********************TLSTLLPR
Disordered Region (DISEMBL)
ENAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRVKSSSDLKVCSANEVTLSTLLPR
Disordered Region (DISPRO)
*NAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRV******KVCSANEVTLSTLLP*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ENAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRVKSSSDLKVCSANEVTLSTLLPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
O23082	379	Putative receptor-like pr	yes	no	0.573	0.255	0.504	2e-20
Q8RX80	659	Cysteine-rich receptor-li	no	no	0.591	0.151	0.443	8e-20
Q39086	843	Receptor-like serine/thre	no	no	0.656	0.131	0.429	7e-19
O23081	665	Cysteine-rich receptor-li	no	no	0.568	0.144	0.490	8e-19
O65482	830	Putative cysteine-rich re	no	no	0.591	0.120	0.425	2e-18
Q9S972	847	Receptor-like serine/thre	no	no	0.656	0.131	0.421	7e-18
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.467	0.118	0.481	1e-17
Q8L710	686	Cysteine-rich receptor-li	no	no	0.378	0.093	0.520	4e-17
Q8W4G6	627	Cysteine-rich receptor-li	no	no	0.479	0.129	0.444	4e-17
Q8GWJ7	645	Cysteine-rich receptor-li	no	no	0.591	0.155	0.409	4e-17

>sp|O23082|Y4960_ARATH Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana GN=At4g00960 PE=2 SV=2

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 8/105 (7%)

Query: 73  TWKLWCEGNVQELMDPVLKESFIL-EEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT 131
            WK W EG V  ++DP L E+  L +EI K IHIGLLCVQE+P  RPTM+S+V ML  ++
Sbjct: 275 VWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRMLNANS 334

Query: 132 ITLPQPTQPAFSVGRVKSSS-------DLKVCSANEVTLSTLLPR 169
            TLP+P QPAF  G V SSS       + ++ S N+VT++ L PR
Sbjct: 335 FTLPRPLQPAFYSGVVDSSSRDNNHTRNPRIASLNDVTITELDPR 379

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8RX80|CRK18_ARATH Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2

 Score = 96.3 bits (238), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 6/106 (5%)

Query: 70  VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT 129
           V   WKLW   ++ EL+DP + + F  EE+++ IHIGLLCVQE+PADRPTMS++  ML  
Sbjct: 554 VTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTN 613

Query: 130 DTITLPQPTQPAFSVGR------VKSSSDLKVCSANEVTLSTLLPR 169
            +ITLP P  P F           +S+S    CS +E T++ + PR
Sbjct: 614 SSITLPVPLPPGFFFRNGPGSNPGQSNSKSFACSVDEATITDVNPR 659

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 17/128 (13%)

Query: 54  RNFSNENK-LGEGGFGPVYKTWKLWCEGNVQELMDPV----LKESFILEEILKRIHIGLL 108
           + F N N+ L   GF      W+ W EGN  E++DP+    L   F   EIL+ I IGLL
Sbjct: 721 KGFYNSNRDLNLLGF-----VWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLL 775

Query: 109 CVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGR----VKSSSDLKV---CSANEV 161
           CVQE   DRP MSSV+VML ++T  +PQP +P F +GR      SSS  +    C+ N++
Sbjct: 776 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEADSSSSTQRDDECTVNQI 835

Query: 162 TLSTLLPR 169
           TLS +  R
Sbjct: 836 TLSVIDAR 843

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O23081|CRK41_ARATH Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=3 SV=2

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 6/102 (5%)

Query: 74  WKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
           WK W EG V  ++DP L E+  + +EI+K IHIGLLCVQE+   RPTM+SVVVML  ++ 
Sbjct: 564 WKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANSF 623

Query: 133 TLPQPTQPAFSVGRVKSSSDLK-----VCSANEVTLSTLLPR 169
           TLP+P+QPAF  G  +S S  K     + S N+VT++    R
Sbjct: 624 TLPRPSQPAFYSGDGESLSRDKNQINHIASLNDVTITEFDAR 665

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 8/108 (7%)

Query: 70  VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT 129
           V  TW+LW  G+  +L+DP   +++   +I + IHI LLCVQED  DRP MS++V ML T
Sbjct: 723 VTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTT 782

Query: 130 DTITLPQPTQPAF-------SVGRVKSSSD-LKVCSANEVTLSTLLPR 169
            +I L  P QP F        VG V SS D L +CS ++ +++++ PR
Sbjct: 783 SSIVLAVPKQPGFFFRGRHEQVGEVGSSVDRLALCSIDDASITSVAPR 830

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 17/128 (13%)

Query: 54  RNFSNENK-LGEGGFGPVYKTWKLWCEGNVQELMDPV----LKESFILEEILKRIHIGLL 108
           + F N N+ L   GF      W+ W EG   E++DP+    L   F   EIL+ I IGLL
Sbjct: 725 KGFYNSNRDLNLLGF-----VWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLL 779

Query: 109 CVQEDPADRPTMSSVVVMLATDTITLPQPTQPAFSVGRVKSSSDLKV-------CSANEV 161
           CVQE   DRP MSSV+VML ++T  +PQP +P F VGR     D          C+ N+V
Sbjct: 780 CVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQV 839

Query: 162 TLSTLLPR 169
           TLS +  R
Sbjct: 840 TLSVIDAR 847

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 54/79 (68%)

Query: 64  EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSV 123
           +G    V   W LW  G   EL+DP + E+    E+++ +HIGLLCVQEDPA+RPT+S++
Sbjct: 556 DGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTI 615

Query: 124 VVMLATDTITLPQPTQPAF 142
           V+ML ++T+TLP P QP  
Sbjct: 616 VLMLTSNTVTLPVPRQPGL 634

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8L710|CRK17_ARATH Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2

 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 51/73 (69%)

Query: 70  VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT 129
           V   WKLW    + EL+DP +KE    +E+++ +HIGLLCVQE+PADRPTMS++  +L T
Sbjct: 574 VTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTT 633

Query: 130 DTITLPQPTQPAF 142
            +ITLP P  P F
Sbjct: 634 SSITLPVPQPPGF 646

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2

 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 55/81 (67%)

Query: 64  EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSV 123
           +G    V   W+LW  G   +L+DP++ ++    E+++ IHI LLCVQEDPA+RP +S++
Sbjct: 545 DGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTI 604

Query: 124 VVMLATDTITLPQPTQPAFSV 144
            +ML ++T+TLP P QP F V
Sbjct: 605 FMMLTSNTVTLPVPLQPGFPV 625

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2

 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)

Query: 70  VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT 129
           V  TW+LW  G+  EL+DP   +++   EI + IHI LLCVQED  DRPTMSS+V ML T
Sbjct: 541 VTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTT 600

Query: 130 DTITLPQPTQPAFSVGRVKSSSDLKV-----CSANEVTLSTLLPR 169
             I L +P  P F     +  +   +     CS +E +++ + PR
Sbjct: 601 SLIALAEPRPPGFFFRSKQEQAGPSIDSSTHCSVDEASITRVTPR 645

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
224113927	381	predicted protein [Populus trichocarpa]	0.639	0.283	0.607	1e-29
356554943	670	PREDICTED: cysteine-rich receptor-like p	0.621	0.156	0.577	2e-28
224076400	666	predicted protein [Populus trichocarpa]	0.639	0.162	0.598	3e-28
356546303	662	PREDICTED: cysteine-rich receptor-like p	0.621	0.158	0.560	3e-28
356554939	662	PREDICTED: cysteine-rich receptor-like p	0.639	0.163	0.557	4e-28
358346817	626	Cysteine-rich receptor-like protein kina	0.639	0.172	0.557	4e-27
358346648	573	Cysteine-rich receptor-like protein kina	0.639	0.188	0.557	6e-27
357515517	254	Cysteine-rich receptor-like protein kina	0.573	0.381	0.572	6e-26
255555021	686	ATP binding protein, putative [Ricinus c	0.573	0.141	0.598	7e-26
92886105	407	Protein kinase [Medicago truncatula]	0.573	0.238	0.578	1e-25

>gi|224113927|ref|XP_002316616.1| predicted protein [Populus trichocarpa] gi|222859681|gb|EEE97228.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 84/112 (75%), Gaps = 4/112 (3%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G   +   WKLW +G   ELMDP+L++S +  E+L+ IHIGLLCVQEDPADRPTMS
Sbjct: 270 LSEEGESLLTFAWKLWSDGQGLELMDPMLEKSGVATEVLRCIHIGLLCVQEDPADRPTMS 329

Query: 122 SVVVMLATDTITLPQPTQPAFSVGRVKS----SSDLKVCSANEVTLSTLLPR 169
           SV+ MLA+DTITLP P QPAFS+GR  +    SS+ KVCS+NE+T+S L PR
Sbjct: 330 SVLHMLASDTITLPIPKQPAFSIGRFVAMEGQSSNQKVCSSNELTISVLSPR 381

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554943|ref|XP_003545800.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 81/116 (69%), Gaps = 11/116 (9%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G       WKLWC G   EL+DPVL+ES I  E++K IHIGLLCVQED ADRPTMS
Sbjct: 558 LSECGQSLTLYAWKLWCAGKCLELLDPVLEESCIESEVVKCIHIGLLCVQEDAADRPTMS 617

Query: 122 SVVVMLATDTITLPQPTQPAFSVGRV--------KSSSDLKVCSANEVTLSTLLPR 169
           +VVVMLA+D + LP+P QPAFSVGR+        KSS +L +   N+VT+S +LPR
Sbjct: 618 TVVVMLASDKMPLPKPNQPAFSVGRMTLEDASTSKSSKNLSI---NDVTVSNILPR 670

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076400|ref|XP_002304937.1| predicted protein [Populus trichocarpa] gi|222847901|gb|EEE85448.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 81/112 (72%), Gaps = 4/112 (3%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G   +  TWKLW EG   ELMD +L++S +  E+LK IHIGLLCVQEDP DRPTMS
Sbjct: 555 LSEEGKSLLNFTWKLWSEGKGLELMDSLLEKSSVATEVLKCIHIGLLCVQEDPVDRPTMS 614

Query: 122 SVVVMLATDTITLPQPTQPAFSVGRV----KSSSDLKVCSANEVTLSTLLPR 169
           SVVVMLA D   +P PT+PAFSVGR+     +SS+ +V S N+VTLS +LPR
Sbjct: 615 SVVVMLAGDNFKIPIPTKPAFSVGRIVAEETTSSNQRVSSVNKVTLSNVLPR 666

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546303|ref|XP_003541568.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 11/116 (9%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G       WK+WC G   ELMDPVL++S I  E++K IHIGLLCVQED ADRPTMS
Sbjct: 550 LSECGQSLTLYAWKIWCAGKSLELMDPVLEKSCIESEVMKCIHIGLLCVQEDAADRPTMS 609

Query: 122 SVVVMLATDTITLPQPTQPAFSVGRV--------KSSSDLKVCSANEVTLSTLLPR 169
           +VVVMLA+D ++LP+P QPAFSVGR+        KSS +L +   N+VT++ +LPR
Sbjct: 610 TVVVMLASDKMSLPEPNQPAFSVGRMTLEGASTSKSSKNLSI---NDVTVTNILPR 662

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554939|ref|XP_003545798.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 80/113 (70%), Gaps = 5/113 (4%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G G +   WK+WC G   EL+DPVL+ES I  E++K IHIGLLCVQED ADRP MS
Sbjct: 550 LSECGQGLLLYAWKIWCAGKFLELLDPVLEESCIESEVVKCIHIGLLCVQEDAADRPNMS 609

Query: 122 SVVVMLATDTITLPQPTQPAFSVGRV-----KSSSDLKVCSANEVTLSTLLPR 169
           +VVVMLA+DT+ LP+P +PAFSVGR+      +S      S N++T+S +LPR
Sbjct: 610 TVVVMLASDTMVLPKPNRPAFSVGRMALGDASTSKSSNKHSINDITISNILPR 662

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346817|ref|XP_003637461.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355503396|gb|AES84599.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 5/113 (4%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G   +  +W LWCE    EL+DP+LK ++   E++K IHIGLLCVQED  DRPTMS
Sbjct: 514 LAEHGQSLLVYSWNLWCEDKSLELLDPILKNTYTTNEVIKCIHIGLLCVQEDAVDRPTMS 573

Query: 122 SVVVMLATDTITLPQPTQPAFSVGR--VKSSSDLKVC---SANEVTLSTLLPR 169
           +VVVMLA+DT+TLP P  PAFSVGR  V+  S  K     S NEVT++ +LPR
Sbjct: 574 NVVVMLASDTMTLPNPNHPAFSVGRKVVEGESTSKASNDPSVNEVTVTNILPR 626

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346648|ref|XP_003637378.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355503313|gb|AES84516.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 5/113 (4%)

Query: 62  LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS 121
           L E G   +  +W LWCE    EL+DP+LK ++   E++K IHIGLLCVQED  DRPTMS
Sbjct: 461 LAEHGQSLLVYSWNLWCEDKSLELLDPILKNTYTTNEVIKCIHIGLLCVQEDAVDRPTMS 520

Query: 122 SVVVMLATDTITLPQPTQPAFSVGR--VKSSSDLKVC---SANEVTLSTLLPR 169
           +VVVMLA+DT+TLP P  PAFSVGR  V+  S  K     S NEVT++ +LPR
Sbjct: 521 NVVVMLASDTMTLPNPNHPAFSVGRKVVEGESTSKASNDPSVNEVTVTNILPR 573

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357515517|ref|XP_003628047.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|92886090|gb|ABE88100.1| Protein kinase domain [Medicago truncatula] gi|355522069|gb|AET02523.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 6/103 (5%)

Query: 73  TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
           TWKLWCEG   EL+DP  ++++I  E+LK IHIGLLCVQED ADRPT+S+VV ML +DT+
Sbjct: 152 TWKLWCEGKSIELIDPFHQKTYIESEVLKCIHIGLLCVQEDAADRPTISTVVRMLGSDTV 211

Query: 133 TLPQPTQPAFSVGRVKSSSDLKV------CSANEVTLSTLLPR 169
            LPQP QPAFSVGR+  + D          S +EVTL+ + PR
Sbjct: 212 ALPQPNQPAFSVGRMSKNDDQTSKTSKDNYSVDEVTLTIVSPR 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555021|ref|XP_002518548.1| ATP binding protein, putative [Ricinus communis] gi|223542393|gb|EEF43935.1| ATP binding protein, putative [Ricinus communis]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 5/102 (4%)

Query: 73  TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
            WKLW +    EL+DP +  S +  E+LK +HIGLLCVQ+DPA+RPTMSSVVVMLA+DTI
Sbjct: 585 AWKLWNKDQGLELLDPAVVNSSVAIEVLKCVHIGLLCVQDDPAERPTMSSVVVMLASDTI 644

Query: 133 TLPQPTQPAFSVGR-----VKSSSDLKVCSANEVTLSTLLPR 169
           TLPQP +PAFS+G+       SSS+ KV S N+VTLS + PR
Sbjct: 645 TLPQPRKPAFSIGQFVARSATSSSNPKVSSVNQVTLSNVSPR 686

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|92886105|gb|ABE88115.1| Protein kinase [Medicago truncatula]

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 5/102 (4%)

Query: 73  TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
           TWKLWCEG   EL+DP  ++++I  E+LK IHIGLLCVQED ADRPTMS+VV ML +DT+
Sbjct: 306 TWKLWCEGKCLELIDPFHQKTYIESEVLKCIHIGLLCVQEDAADRPTMSTVVRMLGSDTV 365

Query: 133 TLPQPTQPAFSVGRVKSSSDL-----KVCSANEVTLSTLLPR 169
            LP+PTQPAFSVGR   + D      K  S +E T++ + PR
Sbjct: 366 DLPKPTQPAFSVGRKSKNEDQISKNSKDNSVDEETITIVSPR 407

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.568	0.114	0.376	8.7e-24
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.568	0.113	0.394	1.5e-23
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.562	0.116	0.454	1.1e-22
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.550	0.109	0.423	1.6e-22
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.550	0.109	0.387	4.5e-22
TAIR|locus:2121626	830	CRK23 "cysteine-rich RLK (RECE	0.573	0.116	0.428	7.4e-22
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.497	0.125	0.470	9.6e-22
TAIR|locus:2121651	676	CRK8 "cysteine-rich RLK (RECEP	0.473	0.118	0.475	2.1e-21
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.573	0.143	0.392	3.6e-21
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.573	0.150	0.411	6e-21

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
 Identities = 38/101 (37%), Positives = 63/101 (62%)

Query:    74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTIT 133
             W LW +G  +E++DP++K++  + E ++ IH+G+LC Q+    RP M SV++ML + T  
Sbjct:   742 WHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLESQTSQ 801

Query:   134 LPQPTQPAF----SVGRVKSSSD-LKVCSANEVTLSTLLPR 169
             LP P QP F    + G ++ + D   V S N+VT +T++ R
Sbjct:   802 LPPPRQPTFHSFLNSGDIELNFDGHDVASVNDVTFTTIVGR 842

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
 Identities = 41/104 (39%), Positives = 62/104 (59%)

Query:    74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTIT 133
             W L+  G  +EL+DP ++ +    E L+ IH+ +LCVQ+  A+RP M+SV++ML +DT T
Sbjct:   746 WYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLESDTAT 805

Query:   134 LPQPTQPAFSVGRVKS--------SSDLKVCSANEVTLSTLLPR 169
             L  P QP F+  R  S        SS   + S+NE+T + +L R
Sbjct:   806 LAAPRQPTFTSTRRNSIDVNFALDSSQQYIVSSNEITSTVVLGR 849

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 45/99 (45%), Positives = 65/99 (65%)

Query:    74 WKLWCEGNVQELMDPV-LKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
             WK+W E    E+ +   L+E+ ++ E+L+ IH+ LLCVQ+ P DRPTM+SVV+M  +D+ 
Sbjct:   718 WKMWVEDREIEVPEEEWLEETSVIPEVLRCIHVALLCVQQKPEDRPTMASVVLMFGSDS- 776

Query:   133 TLPQPTQPAFSVGR-VKS-SSDLKVCSANEVTLSTLLPR 169
             +LP PTQP F   R V   SS L + S NEV+++ L  R
Sbjct:   777 SLPHPTQPGFFTNRNVPDISSSLSLRSQNEVSITMLQGR 815

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 44/104 (42%), Positives = 64/104 (61%)

Query:    74 WKLWCEGNVQELMDPVLKES---FILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD 130
             W+ W EG   E++DP++ +S   F   EIL+ I IGLLCVQE   DRPTMS V++ML ++
Sbjct:   744 WRNWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPTMSLVILMLGSE 803

Query:   131 TITLPQPTQPAFSVGR----VKSSS----DLKVCSANEVTLSTL 166
             + T+PQP  P + + R      SSS    D +  + N++T+S L
Sbjct:   804 STTIPQPKAPGYCLERSLLDTDSSSSKQRDDESWTVNQITVSVL 847

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 175 (66.7 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
 Identities = 38/98 (38%), Positives = 59/98 (60%)

Query:    74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTIT 133
             W+ W E N  EL+DPV++ S  + ++L+ IHI LLCVQ+   +RP + +V++ML+ D+ +
Sbjct:   748 WRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSS 807

Query:   134 LPQPTQPAFSV-GRV----KSSSDLKVCSANEVTLSTL 166
             LP P  P   + GR     KSS   +  S   VT++ L
Sbjct:   808 LPNPRPPTLMLRGREIESSKSSEKDRSHSIGTVTMTQL 845

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
 Identities = 45/105 (42%), Positives = 65/105 (61%)

Query:    73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
             TW+LW  G+  +L+DP   +++   +I + IHI LLCVQED  DRP MS++V ML T +I
Sbjct:   726 TWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSI 785

Query:   133 TLPQPTQPAF-------SVGRVKSSSD-LKVCSANEVTLSTLLPR 169
              L  P QP F        VG V SS D L +CS ++ +++++ PR
Sbjct:   786 VLAVPKQPGFFFRGRHEQVGEVGSSVDRLALCSIDDASITSVAPR 830

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
 Identities = 40/85 (47%), Positives = 57/85 (67%)

Query:    64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSV 123
             +G    V   W LW  G   EL+DP + E+    E+++ +HIGLLCVQEDPA+RPT+S++
Sbjct:   556 DGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTI 615

Query:   124 VVMLATDTITLPQPTQPA-FSVGRV 147
             V+ML ++T+TLP P QP  F   R+
Sbjct:   616 VLMLTSNTVTLPVPRQPGLFFQSRI 640

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 39/82 (47%), Positives = 56/82 (68%)

Query:    73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
             TW+LW      +L+DP++  +    E+++ IHIGLLCVQEDPA RPT+S+V +ML ++T+
Sbjct:   570 TWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTV 629

Query:   133 TLPQPTQPAFSV--GRVKSSSD 152
             TLP P QP F +    VK  +D
Sbjct:   630 TLPVPRQPGFFIQSSPVKDPTD 651

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 42/107 (39%), Positives = 65/107 (60%)

Query:    73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
             TW+LW  G+  EL+DP  ++++ + E+ + IHI LLCVQE+  DRPTMS++V ML T +I
Sbjct:   570 TWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSI 629

Query:   133 TLPQPTQPAF--------SVGRVK--SSSDLKVCSANEVTLSTLLPR 169
              L  P +P F         VG V   S +   +CS ++ +++ + PR
Sbjct:   630 ALAVPQRPGFFFRSSKHEQVGLVDRLSINTSALCSVDDASITNVTPR 676

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
 Identities = 42/102 (41%), Positives = 59/102 (57%)

Query:    73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
             TW+LW  G+  EL+DP   +++   EI + IHI LLCVQED  DRPTMSS+V ML T  I
Sbjct:   544 TWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLI 603

Query:   133 TLPQPTQPAFSVGRVKSSSDLKV-----CSANEVTLSTLLPR 169
              L +P  P F     +  +   +     CS +E +++ + PR
Sbjct:   604 ALAEPRPPGFFFRSKQEQAGPSIDSSTHCSVDEASITRVTPR 645

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	169
pfam11883	48	pfam11883, DUF3403, Domain of unknown function (DU	2e-05

>gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403)

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 129 TDTITLPQPTQPAFSVGR-------VKSSSDLKVCSANEVTLSTLLPR 169
           ++T  +PQP QP F VGR         S+   +  + N+VT+S +  R
Sbjct: 1   SETTEIPQPKQPGFCVGRSPYETDSSSSTQRDESWTVNQVTVSVIDAR 48

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.95
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.7
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.54
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.52
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.49
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.49
PHA02988	283	hypothetical protein; Provisional	99.46
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.43
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.41
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.41
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.4
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.39
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.37
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.36
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.35
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.35
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.34
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.34
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.34
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.34
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.32
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.32
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.32
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.31
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.31
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.31
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.31
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.3
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.29
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.28
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.28
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.28
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.28
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.28
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.27
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.27
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.27
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.26
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.26
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.26
PTZ00283	496	serine/threonine protein kinase; Provisional	99.26
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.25
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.25
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.25
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.25
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.24
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.24
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.24
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.23
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.23
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.23
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.23
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.23
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.23
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.23
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.23
PHA02882	294	putative serine/threonine kinase; Provisional	99.22
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.22
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.22
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.22
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.21
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.21
KOG0198	313	consensus MEKK and related serine/threonine protei	99.21
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.21
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.21
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.21
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.21
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.21
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.21
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.21
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.21
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.21
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.2
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.2
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.2
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.2
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.19
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.19
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.18
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.18
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.18
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.18
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.18
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.17
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.17
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.17
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.17
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.17
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.17
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.16
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.16
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.16
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.16
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.16
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.15
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.15
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.15
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.15
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.15
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.15
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.14
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.14
PTZ00267	478	NIMA-related protein kinase; Provisional	99.14
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.14
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.14
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.14
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.13
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.13
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.13
PTZ00036	440	glycogen synthase kinase; Provisional	99.13
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.12
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.12
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.12
PLN00181	793	protein SPA1-RELATED; Provisional	99.12
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.12
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.12
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.12
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.11
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.11
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.11
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.11
PHA03209	357	serine/threonine kinase US3; Provisional	99.1
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.1
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.1
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.1
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.1
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.09
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.09
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.08
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.08
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.08
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.08
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.08
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.07
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.07
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.07
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.07
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.07
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.07
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.06
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.06
PHA03212	391	serine/threonine kinase US3; Provisional	99.06
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.06
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.06
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.05
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.05
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.05
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.05
KOG0578	550	consensus p21-activated serine/threonine protein k	99.05
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.04
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.04
PTZ00284	467	protein kinase; Provisional	99.04
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.04
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.04
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.04
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.04
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.04
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.03
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.03
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.02
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.02
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.02
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.02
PHA03211	461	serine/threonine kinase US3; Provisional	99.02
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.02
PHA03207	392	serine/threonine kinase US3; Provisional	99.02
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.02
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.02
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.01
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.01
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.01
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.01
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.01
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.99
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.99
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.99
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.99
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.99
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.99
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.99
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.99
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.99
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.98
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.98
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.98
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.98
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.98
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.97
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.95
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.95
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.95
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.95
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.94
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.94
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	98.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.93
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.93
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.93
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.92
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.92
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.92
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.92
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.92
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.92
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.92
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.91
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.91
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.9
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.9
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.89
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.89
PLN00009	294	cyclin-dependent kinase A; Provisional	98.89
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.89
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.89
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.89
PHA03210	501	serine/threonine kinase US3; Provisional	98.89
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.88
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.88
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.88
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.88
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.88
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.87
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.87
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.87
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.87
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.87
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.87
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.87
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.87
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.86
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.85
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.85
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.85
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.85
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.84
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.84
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.84
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.84
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.84
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.83
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.83
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.83
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.83
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.82
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.82
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.82
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.82
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.82
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.81
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.81
KOG3653	534	consensus Transforming growth factor beta/activin	98.81
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.81
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.81
KOG0584	632	consensus Serine/threonine protein kinase [General	98.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.8
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.8
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.8
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.8
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.79
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.78
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.78
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.78
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.78
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.77
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.76
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.76
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.76
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.76
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.74
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.74
KOG0589	426	consensus Serine/threonine protein kinase [General	98.73
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.72
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.71
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.71
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.71
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.7
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.7
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.69
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.68
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.67
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.66
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.66
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.65
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.65
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.63
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.62
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.62
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.61
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.6
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.6
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.59
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.59
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.58
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.57
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.57
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.57
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.57
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.55
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.55
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.55
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.54
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.53
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.52
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.51
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.48
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.48
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.48
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.48
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.48
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.48
KOG0586	596	consensus Serine/threonine protein kinase [General	98.47
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.47
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.45
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.45
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.44
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.44
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.43
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.32
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.29
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.27
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.27
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.26
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.26
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.25
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.23
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.2
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.2
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.16
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.14
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.13
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.09
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.08
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.08
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.03
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	97.98
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	97.93
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	97.92
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.89
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.87
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	97.82
KOG0605	550	consensus NDR and related serine/threonine kinases	97.81
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	97.81
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.75
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.73
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.72
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	97.71
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.7
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.65
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.64
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.64
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.64
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.53
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	97.36
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.31
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.15
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.03
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	96.96
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	96.7
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.7
KOG1152	772	consensus Signal transduction serine/threonine kin	96.62
KOG0695	593	consensus Serine/threonine protein kinase [Signal	96.61
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.01
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	95.09
KOG1167	418	consensus Serine/threonine protein kinase of the C	94.71
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	94.68
KOG0607	463	consensus MAP kinase-interacting kinase and relate	94.5
COG0515	384	SPS1 Serine/threonine protein kinase [General func	93.88
PRK09188	365	serine/threonine protein kinase; Provisional	92.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	92.46
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	92.27
KOG0610	459	consensus Putative serine/threonine protein kinase	91.71
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	90.61
KOG1266	458	consensus Protein kinase [Signal transduction mech	90.28
KOG0590	601	consensus Checkpoint kinase and related serine/thr	89.88
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	87.31
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	81.67

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-28  Score=185.16  Aligned_cols=125  Identities=27%  Similarity=0.329  Sum_probs=110.0

Q ss_pred             CcccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +||+|||+|||+++.             ||.||+|||| ...+..+.|+|||+   ||+++||++||+.+.+.....+..
T Consensus       212 ~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy-~~~g~lt~KsDVyS---FGVvllElitgr~~~d~~~~~~~~  287 (361)
T KOG1187|consen  212 EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEY-ASTGKLTEKSDVYS---FGVVLLELITGRKAVDQSRPRGEL  287 (361)
T ss_pred             CCCCEEccCccCcccCCccccceeeecCCCCccCChhh-hccCCcCccccccc---chHHHHHHHhCCcccCCCCCcccc
Confidence            589999999998764             5779999999 55688899999999   888899999999887765555566


Q ss_pred             chhhhhHHhhhCCCeeeecccccc-ccccH-HHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLK-ESFIL-EEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~-~~~~~-~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .++.|++..+..+.+.+++|++|. +.+.. +++.+++.+|++|++.+|..||+|.||+++|+.
T Consensus       288 ~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~  351 (361)
T KOG1187|consen  288 SLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG  351 (361)
T ss_pred             cHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence            799999999998899999999997 55554 789999999999999999999999999999965

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.70  E-value=6.1e-18  Score=129.63  Aligned_cols=107  Identities=19%  Similarity=0.085  Sum_probs=78.7

Q ss_pred             cceeeeeEeecC------------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            4 KQKVLQFLRSGE------------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         4 ~~Ki~dFgls~~------------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ++||||||+++.            ||..|||||. +.  ....+.|+||||   ||+++.|..|++.+......      
T Consensus       182 ~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv-~~~~~~~~~~K~DvyS---FgIvlWEl~t~~~Pf~~~~~------  251 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISKTSMTSVAGTYRWMAPEV-LRGEKSPYTEKSDVYS---FGIVLWELLTGEIPFEDLAP------  251 (362)
T ss_pred             EEEECCCccceeeccccccccCCCCCccccChhh-hcCCCCcCCccchhhh---HHHHHHHHHHCCCCCCCCCH------
Confidence            899999999975            8899999999 54  457889999999   88889999999877654322      


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      +.-+.         .++....+...+..+...+..+...||+.+|..||++.+++..|+.
T Consensus       252 ~~~~~---------~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~  302 (362)
T KOG0192|consen  252 VQVAS---------AVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLES  302 (362)
T ss_pred             HHHHH---------HHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence            11111         1111222222233355567778888999999999999999999985

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.54  E-value=2.8e-14  Score=122.22  Aligned_cols=109  Identities=18%  Similarity=0.215  Sum_probs=85.6

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeecccccccc--
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKES--   93 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~--   93 (169)
                      ++.+|+|||+ ......+.++|||+   ||+.++|.+||+.+.....+. ...++.|++..+........+|+.+...  
T Consensus       840 ~t~~y~aPE~-~~~~~~~~~sDv~S---~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  914 (968)
T PLN00113        840 ISSAYVAPET-RETKDITEKSDIYG---FGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLDMWIDPSIRGDVS  914 (968)
T ss_pred             ccccccCccc-ccCCCCCcccchhh---HHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCccchhheeCccccCCCC
Confidence            5789999999 44556788999999   888899999999886443332 3357788876665555566778777432  


Q ss_pred             ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           94 FILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        94 ~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...+++..+.+++.+|++.+|.+||+|.+|++.|+.
T Consensus       915 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~  950 (968)
T PLN00113        915 VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES  950 (968)
T ss_pred             ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence            345677788999999999999999999999999987

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.52  E-value=1.5e-14  Score=108.24  Aligned_cols=107  Identities=19%  Similarity=0.160  Sum_probs=75.5

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..++||||||.|+.          ||..||+||= +.....+.++|+||   ||+.+||.++|+||..... .   ....
T Consensus       215 kGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPER-i~g~~Ys~~sDIWS---LGLsllE~a~GrfP~~~~~-~---~~~~  286 (364)
T KOG0581|consen  215 KGEVKICDFGVSGILVNSIANTFVGTSAYMSPER-ISGESYSVKSDIWS---LGLSLLELAIGRFPYPPPN-P---PYLD  286 (364)
T ss_pred             CCCEEeccccccHHhhhhhcccccccccccChhh-hcCCcCCcccceec---ccHHHHHHhhCCCCCCCcC-C---CCCC
Confidence            46899999999986          9999999997 54556678899999   9999999999999975431 1   1122


Q ss_pred             hhHHhhhCCCeeeecc---ccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMD---PVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      |+..      +..|++   |++...   ..-..+....-.|++.+|.+||+..|.++
T Consensus       287 ~~~L------l~~Iv~~ppP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  287 IFEL------LCAIVDEPPPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHH------HHHHhcCCCCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            2211      112333   233222   12234566677899999999999999864

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.49  E-value=3.6e-15  Score=121.23  Aligned_cols=110  Identities=16%  Similarity=0.022  Sum_probs=77.3

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +++.+||+||||+|.              -...||+||- .-..+-+.++|||+   ||+++.|+.+=+.....-+.   
T Consensus       638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEs-Ily~kFTteSDVWs---~GVvLWEIFsyG~QPy~glS---  710 (774)
T KOG1026|consen  638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPES-ILYGKFTTESDVWS---FGVVLWEIFSYGKQPYYGLS---  710 (774)
T ss_pred             cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHH-hhcCcccchhhhhh---hhhhhhhhhccccCcccccc---
Confidence            578999999999997              1368999998 44667789999999   66666666552221110000   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         -+.+.....+|        .+ -..+.++...+..|.+.||+.+|.+||+++||-..|+.
T Consensus       711 ---n~EVIe~i~~g--------~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~  761 (774)
T KOG1026|consen  711 ---NQEVIECIRAG--------QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA  761 (774)
T ss_pred             ---hHHHHHHHHcC--------Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence               01122222233        22 22466778889999999999999999999999999987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.49  E-value=6.6e-15  Score=114.31  Aligned_cols=110  Identities=19%  Similarity=0.073  Sum_probs=76.0

Q ss_pred             CcccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      ++..+|||||||+|.             -...|.|||. +....-+.++||||   ||+.+.|..|-+...     .++.
T Consensus       338 ~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa-~~~~~FS~kSDVWS---FGVlL~E~fT~G~~p-----y~~m  408 (468)
T KOG0197|consen  338 EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEA-LNYGKFSSKSDVWS---FGVLLWELFTYGRVP-----YPGM  408 (468)
T ss_pred             cCceEEEcccccccccCCCceeecCCCCCCceecCHHH-HhhCCcccccceee---hhhhHHHHhccCCCC-----CCCC
Confidence            467899999999996             1367999998 66778889999999   555566666642211     0111


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...          .+.+.++..-+-..+..|...+.+|...||+.+|++|||+......|+.
T Consensus       409 sn~----------ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  409 SNE----------EVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             CHH----------HHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence            111          1222333333333455677788899999999999999999988877765

>PHA02988 hypothetical protein; Provisional

Probab=99.46  E-value=1.9e-14  Score=107.49  Aligned_cols=111  Identities=17%  Similarity=0.012  Sum_probs=75.0

Q ss_pred             CcccceeeeeEeecC---------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            1 ENAKQKVLQFLRSGE---------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~---------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ++..+||+|||+++.         |+..|+|||+..+ ....+.++|+|+   ||+.+.+..+|..+.....      ..
T Consensus       158 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~S---lGvil~el~~g~~Pf~~~~------~~  228 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYS---LGVVLWEIFTGKIPFENLT------TK  228 (283)
T ss_pred             CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhH---HHHHHHHHHHCCCCCCCCC------HH
Confidence            357899999999874         7889999998332 145678999999   8888899999887754211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .........+.     ...+.    ..+...+.++...|++.+|++||+|.++++.|+.
T Consensus       229 ~~~~~i~~~~~-----~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        229 EIYDLIINKNN-----SLKLP----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             HHHHHHHhcCC-----CCCCC----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            11111111110     01111    1122346678889999999999999999999876

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.43  E-value=5e-14  Score=107.45  Aligned_cols=109  Identities=17%  Similarity=0.027  Sum_probs=71.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++..+ |..+.......  
T Consensus       210 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDiws---lG~il~el~~~g~~pf~~~~~~--  283 (338)
T cd05102         210 NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES-IFDKVYTTQSDVWS---FGVLLWEIFSLGASPYPGVQIN--  283 (338)
T ss_pred             CCcEEEeecccccccccCcchhcccCCCCCccccCcHH-hhcCCCCcccCHHH---HHHHHHHHHhCCCCCCCCCCcc--
Confidence            56799999999874              3467999998 33455678899999   8888888876 65543221100  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+..     ...    +......+..+...|++.+|.+||++.++++.|+.
T Consensus       284 ----~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~  333 (338)
T cd05102         284 ----EEFCQRLKDGTR-----MRA----PENATPEIYRIMLACWQGDPKERPTFSALVEILGD  333 (338)
T ss_pred             ----HHHHHHHhcCCC-----CCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                001111111111     011    11122356789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.41  E-value=1.2e-13  Score=108.98  Aligned_cols=107  Identities=16%  Similarity=0.083  Sum_probs=77.0

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||-++.           ||..|||||+ ++...-.+|+|+|+   ||+++.|.+|+..+..+.- .   .-+-|
T Consensus       250 ~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEv-IrnePcsEKVDIwS---fGVVLWEmLT~EiPYkdVd-s---sAIIw  321 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEV-IRNEPCSEKVDIWS---FGVVLWEMLTGEIPYKDVD-S---SAIIW  321 (904)
T ss_pred             eEEeccccchHhhhhhhhhhhhhhhHhhhCHHH-hhcCCcccccceeh---hHHHHHHHHhcCCCccccc-h---heeEE
Confidence            579999998885           9999999999 66777789999999   8888889999988764421 1   01111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                           .-|      ...|.-..+..|..-+.-+...||+..|..||++++++.-|+-
T Consensus       322 -----GVG------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  322 -----GVG------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             -----ecc------CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence                 111      1111111233445556667788999999999999999998875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.41  E-value=4.9e-14  Score=118.16  Aligned_cols=109  Identities=17%  Similarity=0.059  Sum_probs=75.1

Q ss_pred             cccceeeeeEeecC----------C----CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE----------G----RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------g----t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      ...+||+|||+||.          |    ...|||||. +..+.-+.|+|||+   ||+.+.|+.|.+...-.....  +
T Consensus       838 ~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEs-l~d~iFtskSDvWs---FGVllWEifslG~~PY~~~~n--~  911 (1025)
T KOG1095|consen  838 RRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPES-LKDGIFTSKSDVWS---FGVLLWEIFSLGATPYPSRSN--F  911 (1025)
T ss_pred             cCcEEEcccchhHhhhhchheeccCccccceecCCHHH-Hhhcccccccchhh---hHHHHHHHHhCCCCCCCCcch--H
Confidence            46799999999995          2    268999999 55677889999999   555566666644332110000  0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .+...+..+.       +|.  .+..|..++.+|...||+.+|.+||++..+++.+..
T Consensus       912 ----~v~~~~~~gg-------RL~--~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  912 ----EVLLDVLEGG-------RLD--PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             ----HHHHHHHhCC-------ccC--CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence                0111111111       232  356777889999999999999999999999998875

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.40  E-value=5.7e-14  Score=104.33  Aligned_cols=108  Identities=11%  Similarity=-0.039  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+..+ |..+....     
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDv~s---lG~il~el~~~g~~p~~~~-----  230 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEA-ILYGKFTTESDIWS---FGVVLWEIFSYGLQPYYGF-----  230 (283)
T ss_pred             CCcEEECCCcceeeccccccccccCCCcccccccCHHH-hccCcCchhhhHHH---HHHHHHHHHcCCCCCCCCC-----
Confidence            46789999999864              3567999998 33455678899999   7777888877 55443211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .... .......+...         ..+......+.++...|++.+|.+||++.+|++.|+.
T Consensus       231 -~~~~-~~~~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         231 -SNQE-VIEMIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             -CHHH-HHHHHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence             0000 11111111111         1122333567788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.39  E-value=1.7e-13  Score=101.91  Aligned_cols=123  Identities=11%  Similarity=-0.049  Sum_probs=75.2

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|++||+ ......+.++|+|+   ||+.+++.+||..+.......- 
T Consensus       143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~Di~s---lG~~l~el~tg~~p~~~~~~~~-  217 (283)
T cd05080         143 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVEC-LKENKFSYASDVWS---FGVTLYELLTHCDSKQSPPKKF-  217 (283)
T ss_pred             CCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhH-hcccCCCcccccHH---HHHHHHHHHhCCCCCCCCcchh-
Confidence            45789999999874               2345899998 43455678899999   8888889999887643211100 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+...........+.++.......+......+..+...|++.+|++||+|.+|++.|+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~  280 (283)
T cd05080         218 EEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE  280 (283)
T ss_pred             hhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            000000000000001111222222111122233567889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.37  E-value=3.7e-14  Score=114.87  Aligned_cols=111  Identities=16%  Similarity=0.121  Sum_probs=80.8

Q ss_pred             CcccceeeeeEeecC-------------C--CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE-------------G--RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------g--t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      .|+..||+||||||.             |  ...|.|||- ....+-+..+||||||++.++++   +        +|+ 
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEA-Ia~RKFTsASDVWSyGIVmWEVm---S--------yGE-  832 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEA-IAYRKFTSASDVWSYGIVMWEVM---S--------YGE-  832 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecChhH-hhhcccCchhhccccceEEEEec---c--------cCC-
Confidence            378899999999986             1  268999998 55777889999999666555544   1        222 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                         -.||-+.   ..++.+.+....+-..+++|...+-+|++.|||.+..+||.+.|+|..|...
T Consensus       833 ---RPYWdmS---NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  833 ---RPYWDMS---NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             ---Ccccccc---hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence               2334321   2223344444444445778889999999999999999999999999999873

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.36  E-value=2.4e-13  Score=105.39  Aligned_cols=109  Identities=13%  Similarity=0.059  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++.++ |+.+........ 
T Consensus       248 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DvwS---lGvil~ellt~G~~Pf~~~~~~~-  322 (374)
T cd05106         248 GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPES-IFDCVYTVQSDVWS---YGILLWEIFSLGKSPYPGILVNS-  322 (374)
T ss_pred             CCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHH-hcCCCCCccccHHH---HHHHHHHHHhCCCCCCccccccH-
Confidence            45789999999874              2356999998 43455678999999   8888888887 666543211110 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .   .......+.  ....+.   ..    ...+.++...|++.+|.+||++.+|+++|+.
T Consensus       323 --~---~~~~~~~~~--~~~~~~---~~----~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         323 --K---FYKMVKRGY--QMSRPD---FA----PPEIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             --H---HHHHHHccc--CccCCC---CC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              0   011111110  011111   11    1346678889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.35  E-value=3.4e-13  Score=103.16  Aligned_cols=109  Identities=17%  Similarity=0.034  Sum_probs=72.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ +.....+.++|+|+   ||+.+++.++ |..+.......  
T Consensus       209 ~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~S---lGv~l~el~t~g~~p~~~~~~~--  282 (337)
T cd05054         209 NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES-IFDKVYTTQSDVWS---FGVLLWEIFSLGASPYPGVQID--  282 (337)
T ss_pred             CCcEEEeccccchhcccCcchhhccCCCCCccccCcHH-hcCCCCCccccHHH---HHHHHHHHHHcCCCCCCCCCcc--
Confidence            46789999999874              3467999998 43556678899999   8888888887 66554321111  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+..  ...       +......+.+++.+|++.+|.+||++.+|++.|+.
T Consensus       283 ----~~~~~~~~~~~~--~~~-------~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         283 ----EEFCRRLKEGTR--MRA-------PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             ----HHHHHHHhccCC--CCC-------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                001111111110  000       11122457788999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.35  E-value=2.7e-13  Score=105.10  Aligned_cols=109  Identities=15%  Similarity=0.082  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.++ |..+.......  
T Consensus       250 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDi~s---lG~~l~ellt~g~~p~~~~~~~--  323 (375)
T cd05104         250 GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPES-IFNCVYTFESDVWS---YGILLWEIFSLGSSPYPGMPVD--  323 (375)
T ss_pred             CCcEEEecCccceeccCcccccccCCCCCCcceeChhH-hcCCCCCCCCCHHH---HHHHHHHHHhcCCCCCCCCCch--
Confidence            45789999999864              2346999998 44556678899999   7777888887 44432211100  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+.  ....+.       .....+.++...|++.+|++||+|.+|+++|+.
T Consensus       324 ----~~~~~~~~~~~--~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         324 ----SKFYKMIKEGY--RMLSPE-------CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             ----HHHHHHHHhCc--cCCCCC-------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence                01111111111  001111       112346788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.34  E-value=1.6e-13  Score=102.05  Aligned_cols=108  Identities=11%  Similarity=-0.070  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+...      
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~el~~~g~~p~~~------  229 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEA-IMYGKFSIDSDIWS---YGVVLWEVFSYGLQPYCG------  229 (283)
T ss_pred             CCceEecccccccccccchheeeccCccCCccccCHHH-HhcCCCCcchhHHH---HHHHHHHHHcCCCCCCCC------
Confidence            56799999998774              3468999998 33455677899999   8888888888 4333211      


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+ ......+....         .+......+..+...|++.+|.+||++.+|+..|+.
T Consensus       230 ~~~~~~-~~~i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         230 YSNQDV-IEMIRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCHHHH-HHHHHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            111111 11111111111         111223346788899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.34  E-value=1.6e-12  Score=97.76  Aligned_cols=114  Identities=11%  Similarity=-0.009  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh--CCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR--NFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~--~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++.+++  ..+....   .
T Consensus       174 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~el~~~~~~~p~~~~---~  246 (304)
T cd05096         174 NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWEC-ILMGKFTTASDVWA---FGVTLWEILMLCKEQPYGEL---T  246 (304)
T ss_pred             CccEEECCCccceecccCceeEecCcCCCCccccCHHH-HhcCCCCchhhhHH---HHHHHHHHHHccCCCCCCcC---C
Confidence            46789999999873              2567999998 44556678899999   77777776653  3322211   0


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ......++...+.... ..+.. .    .+..+...+.++...|++.+|.+||+|.+|++.|+
T Consensus       247 ~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         247 DEQVIENAGEFFRDQG-RQVYL-F----RPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHHHHHhhhcc-ccccc-c----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            1112222222221111 01100 0    01112245778899999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.34  E-value=8.9e-13  Score=104.34  Aligned_cols=114  Identities=13%  Similarity=0.025  Sum_probs=77.9

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +++.+||+||||+..              |...|||||+..  .....++.+|||+   ||+++.|++||.++......+
T Consensus       523 ~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYa---FGiV~YELltg~lPysi~~~d  599 (678)
T KOG0193|consen  523 EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYA---FGIVWYELLTGELPYSIQNRD  599 (678)
T ss_pred             cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhh---hhHHHHHHHhCcCCcCCCChh
Confidence            358899999999875              678999999822  2335578999999   888888999999887521111


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .       .  .|..|.-  .+-+++.. ...++.+.|-+|...||..++++||.+.+++..|+.
T Consensus       600 q-------I--ifmVGrG--~l~pd~s~-~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~  652 (678)
T KOG0193|consen  600 Q-------I--IFMVGRG--YLMPDLSK-IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEE  652 (678)
T ss_pred             h-------e--EEEeccc--ccCccchh-hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHH
Confidence            1       0  1111111  11111111 123455667788889999999999999999998877

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.2e-13  Score=108.38  Aligned_cols=112  Identities=15%  Similarity=0.125  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecCCC------------CCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGEGR------------TGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~gt------------~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+|||||||++.|+            ..|+|||. .....-++++|||+||++.+++.+...-.++..         .
T Consensus       298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEt-l~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~---------~  367 (474)
T KOG0194|consen  298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPET-LNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM---------K  367 (474)
T ss_pred             CCeEEeCccccccCCcceeeccccccCcceecChhh-hccCccccccchhheeeeEEeeeccCCCCCCCC---------C
Confidence            3557999999999864            68999998 656688899999996666555542111111110         0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCC
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT  131 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~  131 (169)
                      ..-+...        ++-...+-..+......+..+...|+..+|++||+|.+|.+.|+...
T Consensus       368 ~~~v~~k--------I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~  421 (474)
T KOG0194|consen  368 NYEVKAK--------IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE  421 (474)
T ss_pred             HHHHHHH--------HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence            0111111        11111111111122334555666999999999999999999998733

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.32  E-value=2.4e-13  Score=99.78  Aligned_cols=108  Identities=13%  Similarity=0.021  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+.+.+| |..+.....   
T Consensus       131 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~~---  203 (257)
T cd05116         131 QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC-MNYYKFSSKSDVWS---FGVLMWEAFSYGQKPYKGMK---  203 (257)
T ss_pred             CCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhH-hccCCcCchhHHHH---HHHHHHHHHhCCCCCCCCCC---
Confidence            45689999999864               1357999998 44455667899999   8888888887 666543211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...+..    ....+...     ....    .....+.++...|++.+|.+||+|.+|++.|+.
T Consensus       204 ~~~~~~----~i~~~~~~-----~~~~----~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         204 GNEVTQ----MIESGERM-----ECPQ----RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHH----HHHCCCCC-----CCCC----CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            111111    11221110     1111    122346678899999999999999999999976

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.32  E-value=1.8e-12  Score=96.91  Aligned_cols=114  Identities=16%  Similarity=0.040  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh--CCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR--NFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~--~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.++.++  ..+.... .  
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~el~~~~~~~p~~~~-~--  238 (296)
T cd05051         166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWES-VLLGKFTTKSDVWA---FGVTLWEILTLCREQPYEHL-T--  238 (296)
T ss_pred             CCceEEccccceeecccCcceeecCcCCCCceecCHHH-hhcCCCCccchhhh---hHHHHHHHHhcCCCCCCCCc-C--
Confidence            35789999999874              3457999998 43456778899999   77777777763  3322110 0  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ...........+..........      .+......+.+++..|++.+|.+||++.+|++.|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         239 DQQVIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             hHHHHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            0111111211111111100111      01112245788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=5.3e-13  Score=105.41  Aligned_cols=104  Identities=15%  Similarity=0.112  Sum_probs=66.5

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +||+.||+|||||..            ||+.|+|||+ ....-..+.+|+||   +|+++..+++|+-|.+..       
T Consensus       153 ~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEV-l~k~gHsfEvDiWS---lGcvmYtLL~G~PPFetk-------  221 (592)
T KOG0575|consen  153 ENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEV-LNKSGHSFEVDIWS---LGCVMYTLLVGRPPFETK-------  221 (592)
T ss_pred             CcCcEEecccceeeeecCcccccceecCCCcccChhH-hccCCCCCchhhhh---hhhHHHhhhhCCCCcccc-------
Confidence            589999999999986            9999999999 43445578999999   666666667777654331       


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      -   +...+..-+..+..-|.   .. ..+   ..++...-++.+|.+||+..+|+.
T Consensus       222 ~---vkety~~Ik~~~Y~~P~---~l-s~~---A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  222 T---VKETYNKIKLNEYSMPS---HL-SAE---AKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             h---HHHHHHHHHhcCccccc---cc-CHH---HHHHHHHHhcCCcccCCCHHHHhc
Confidence            1   11112111111111111   11 112   233444557999999999999985

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.31  E-value=3e-13  Score=100.55  Aligned_cols=108  Identities=10%  Similarity=0.031  Sum_probs=71.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++.+|++||+ ......+.++|+|+   ||+.+++.+| |..+....   ..
T Consensus       145 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dv~s---lG~il~el~t~g~~p~~~~---~~  217 (279)
T cd05111         145 DSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES-ILFGRYTHQSDVWS---YGVTVWEMMSYGAEPYAGM---RP  217 (279)
T ss_pred             CCcEEEcCCccceeccCCCcccccCCCCCcccccCHHH-hccCCcCchhhHHH---HHHHHHHHHcCCCCCCCCC---CH
Confidence            56789999999863              4568999998 44455678899999   7777888887 66543211   00


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+.  ....+..       +...+..+...|++.+|..||++.++.+.|..
T Consensus       218 ----~~~~~~~~~~~--~~~~~~~-------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~  267 (279)
T cd05111         218 ----HEVPDLLEKGE--RLAQPQI-------CTIDVYMVMVKCWMIDENVRPTFKELANEFTR  267 (279)
T ss_pred             ----HHHHHHHHCCC--cCCCCCC-------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                01111122221  1111111       11245667789999999999999999998876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.31  E-value=3.7e-12  Score=95.38  Aligned_cols=115  Identities=14%  Similarity=-0.017  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++..++.......... ..
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DvwS---lG~~l~el~~~~~~~p~~~~~-~~  239 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWES-ILLGKFTTASDVWA---FGVTLWEMFTLCKEQPYSLLS-DE  239 (295)
T ss_pred             CCcEEecccccccccccCcceeccCcCcCceeecChhh-hccCCcCchhhHHH---HHHHHHHHHHcCCCCCCcccC-hH
Confidence            56789999999864              2457999998 43455678999999   777777777743221110000 00


Q ss_pred             chhhhhHHhhhCC-CeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEG-NVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      .........+... .......+.       .....+.+++.+|++.+|++||+|.+|++.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 QVIENTGEFFRNQGRQIYLSQTP-------LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHhhhhccccccCCCCC-------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            1111111111111 100011111       11246788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.31  E-value=6.3e-13  Score=97.71  Aligned_cols=108  Identities=21%  Similarity=0.095  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC----------C---CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE----------G---RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------g---t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.          |   +..|+|||+ ......+.++|+|+   ||+.+++++| |..+....   .  
T Consensus       139 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~---~--  209 (261)
T cd05068         139 NNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEA-ALYNRFSIKSDVWS---FGILLTEIVTYGRMPYPGM---T--  209 (261)
T ss_pred             CCCEEECCcceEEEccCCcccccCCCcCceeccCccc-cccCCCCchhhHHH---HHHHHHHHHhcCCCCCCCC---C--
Confidence            46789999999874          2   236999998 44455678899999   8888889888 55443211   0  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       . .........+..   .      ..+......+.+++.+|++.+|.+||+|.++++.|+.
T Consensus       210 -~-~~~~~~~~~~~~---~------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         210 -N-AEVLQQVDQGYR---M------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             -H-HHHHHHHHcCCC---C------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence             0 011111111110   0      0111223457788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.31  E-value=3.3e-13  Score=100.78  Aligned_cols=108  Identities=15%  Similarity=0.028  Sum_probs=72.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~-----  233 (290)
T cd05045         163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIES-LFDHIYTTQSDVWS---FGVLLWEIVTLGGNPYPGI-----  233 (290)
T ss_pred             CCcEEeccccccccccCccchhcccCCCCCccccCHHH-HccCCcchHhHHHH---HHHHHHHHHhcCCCCCCCC-----
Confidence            56789999999863              3568999998 43455678899999   8888888888 65543211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .....+.....+.     ....    +......+.+++..|++.+|.+||++.++++.|+.
T Consensus       234 --~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~  285 (290)
T cd05045         234 --APERLFNLLKTGY-----RMER----PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK  285 (290)
T ss_pred             --CHHHHHHHHhCCC-----CCCC----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence              1111222222111     1111    11122357788899999999999999999999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.30  E-value=7.6e-13  Score=98.83  Aligned_cols=108  Identities=17%  Similarity=0.031  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++.++ |..+....     
T Consensus       168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~~-----  238 (293)
T cd05053         168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGVLLWEIFTLGGSPYPGI-----  238 (293)
T ss_pred             CCeEEeCccccccccccccceeccCCCCCCccccCHHH-hccCCcCcccceee---hhhHHHHHhcCCCCCCCCC-----
Confidence            45789999999874              3457999998 43455677899999   6666777766 44432110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .. .........+.         ....+......+.++...|++.+|++||++.++++.|+.
T Consensus       239 -~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         239 -PV-EELFKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             -CH-HHHHHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence             01 01111111111         001112223457789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.29  E-value=9.6e-13  Score=97.04  Aligned_cols=108  Identities=16%  Similarity=0.028  Sum_probs=71.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++..+ |..+...   ...
T Consensus       149 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~S---lG~il~el~~~g~~p~~~---~~~  221 (273)
T cd05035         149 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES-LADRVYTSKSDVWA---FGVTMWEIATRGQTPYPG---VEN  221 (273)
T ss_pred             CCeEEECCccceeeccccccccccccccCCccccCHhh-cccCCCCcccchHH---HHHHHHHHHhCCCCCCCC---CCH
Confidence            45789999999874              2357999998 44556678899999   8888888888 5444321   111


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+..    ....+..     ...    +......+.++...|++.+|++||++.+|++.|+.
T Consensus       222 ~~~~~----~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         222 HEIYD----YLRHGNR-----LKQ----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             HHHHH----HHHcCCC-----CCC----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            01111    1111111     011    12233467788889999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.28  E-value=4.4e-13  Score=100.21  Aligned_cols=109  Identities=16%  Similarity=-0.021  Sum_probs=72.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++..| |..+......   
T Consensus       159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~~~~---  231 (291)
T cd05094         159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES-IMYRKFTTESDVWS---FGVILWEIFTYGKQPWFQLSN---  231 (291)
T ss_pred             CCcEEECCCCcccccCCCceeecCCCCCcceeecChHH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCCCH---
Confidence            56789999999863              3567999998 44455677899999   8888888888 6655321100   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                          .........+...+.         .......+.++..+|++.+|++||++.+|+++|+..
T Consensus       232 ----~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         232 ----TEVIECITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             ----HHHHHHHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence                001111222211110         111224577899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.28  E-value=1.1e-12  Score=102.57  Aligned_cols=109  Identities=8%  Similarity=-0.042  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ +.....+.++|+|+   ||+.+++..+ |..+.......  
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DiwS---lGvil~ellt~g~~P~~~~~~~--  346 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPES-IFDNLYTTLSDVWS---YGILLWEIFSLGGTPYPGMIVD--  346 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhh-hcCCCCCchhhHHH---HHHHHHHHHHCCCCCCcccchh--
Confidence            45789999999863              3467999998 33445678899999   7777888776 55554321111  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+..     ..    .+......+.+++..|++.+|++||++.+|+++|+.
T Consensus       347 ----~~~~~~~~~~~~-----~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~  396 (400)
T cd05105         347 ----STFYNKIKSGYR-----MA----KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES  396 (400)
T ss_pred             ----HHHHHHHhcCCC-----CC----CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence                011111111110     00    111223456788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.28  E-value=3.5e-14  Score=104.61  Aligned_cols=106  Identities=16%  Similarity=0.056  Sum_probs=67.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ....|+|||+ ......+.++|||+   ||+.+++..|+ ..+....     
T Consensus       139 ~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~ksDVys---fG~~l~ei~~~~~~p~~~~-----  209 (259)
T PF07714_consen  139 NGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEV-LKDGEYTKKSDVYS---FGMLLYEILTLGKFPFSDY-----  209 (259)
T ss_dssp             TTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHH-HHHSEESHHHHHHH---HHHHHHHHHTTSSGTTTTS-----
T ss_pred             cccccccccccccccccccccccccccccccccccccc-cccccccccccccc---ccccccccccccccccccc-----
Confidence            57899999998774              4468999998 54556789999999   88889999994 4543221     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                       ...... ....++..   ..      .+..+...+..+...||+.+|.+||+|.++++.|
T Consensus       210 -~~~~~~-~~~~~~~~---~~------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  210 -DNEEII-EKLKQGQR---LP------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             -CHHHHH-HHHHTTEE---TT------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             -cccccc-cccccccc---ce------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence             111111 11122211   11      1111224567889999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.28  E-value=6.4e-13  Score=100.53  Aligned_cols=108  Identities=10%  Similarity=0.005  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++.++ |..+....     
T Consensus       145 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lGv~l~el~t~g~~p~~~~-----  215 (316)
T cd05108         145 PQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALES-ILHRIYTHQSDVWS---YGVTVWELMTFGSKPYDGI-----  215 (316)
T ss_pred             CCcEEEccccccccccCCCcceeccCCccceeecChHH-hccCCCCchhhhHH---HHHHHHHHHcCCCCCCCCC-----
Confidence            46789999999984              2457999998 44556678899999   7777888777 65553221     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .... .......+..  .-.+       ..+...+..++..|++.+|.+||++.+++..|..
T Consensus       216 -~~~~-~~~~~~~~~~--~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~  267 (316)
T cd05108         216 -PASE-ISSILEKGER--LPQP-------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  267 (316)
T ss_pred             -CHHH-HHHHHhCCCC--CCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             1111 1111111110  0000       1112346778899999999999999999998876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.28  E-value=8.1e-13  Score=97.29  Aligned_cols=108  Identities=19%  Similarity=0.022  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++.+|++||+ ......+.++|+|+   ||+.+++..+ |..+....      
T Consensus       140 ~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~t~g~~p~~~~------  209 (263)
T cd05052         140 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWA---FGVLLWEIATYGMSPYPGI------  209 (263)
T ss_pred             CCcEEeCCCccccccccceeeccCCCCCccccCCHHH-hccCCCCchhHHHH---HHHHHHHHHcCCCCCCCCC------
Confidence            56789999998875             2357999998 44455677899999   8888888888 55443211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .+.....+.     .+..    +......+.++..+|++.+|++||+|.++.++|+.
T Consensus       210 ~~~~-~~~~~~~~~-----~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         210 DLSQ-VYELLEKGY-----RMER----PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CHHH-HHHHHHCCC-----CCCC----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            1111 111121111     1111    11122456778889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.27  E-value=9.5e-13  Score=96.67  Aligned_cols=109  Identities=18%  Similarity=0.073  Sum_probs=71.6

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                ++..|+|||+ ......+.++|+|+   ||+.+++.++++.+.....   
T Consensus       134 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~~~~~~~~~---  206 (262)
T cd05058         134 SFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALES-LQTQKFTTKSDVWS---FGVLLWELMTRGAPPYPDV---  206 (262)
T ss_pred             CCcEEECCccccccccCCcceeecccccCcCCccccChhH-hccCccchHHHHHH---HHHHHHHHHcCCCCCCCCC---
Confidence            46789999999863                2457999998 43455678899999   8888888888765532211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .......... .+.  ....       +......+.++...|++.+|++||++.+|+..|+.
T Consensus       207 --~~~~~~~~~~-~~~--~~~~-------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         207 --DSFDITVYLL-QGR--RLLQ-------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             --CHHHHHHHHh-cCC--CCCC-------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence              1111111111 111  0000       11112357789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.27  E-value=9.1e-13  Score=96.77  Aligned_cols=108  Identities=16%  Similarity=0.047  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+++.+| |..+....   ...
T Consensus       139 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~t~g~~p~~~~---~~~  211 (261)
T cd05072         139 SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA-INFGSFTIKSDVWS---FGILLYEIVTYGKIPYPGM---SNS  211 (261)
T ss_pred             CCcEEECCCccceecCCCceeccCCCccceecCCHHH-hccCCCChhhhhhh---hHHHHHHHHccCCCCCCCC---CHH
Confidence            45789999999874             2457999998 44555677899999   7888888888 66553211   000


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....    ....+..    -+.. ...    ...+.++...|++.+|++||++.++.+.|+.
T Consensus       212 ~~~~----~~~~~~~----~~~~-~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         212 DVMS----ALQRGYR----MPRM-ENC----PDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHH----HHHcCCC----CCCC-CCC----CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            1111    1111110    0111 111    2346778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.27  E-value=5.3e-12  Score=87.61  Aligned_cols=113  Identities=8%  Similarity=-0.090  Sum_probs=71.8

Q ss_pred             cccceeeeeEeecC-------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhH
Q 041157            2 NAKQKVLQFLRSGE-------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTW   74 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~   74 (169)
                      +..+|+  ||+++.       |+..|||||+ +.....+.++|+|+   ||+.+.+.+||+.+......     +.....
T Consensus        47 ~~~~~~--fG~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~DiwS---lG~il~elltg~~p~~~~~~-----~~~~~~  115 (176)
T smart00750       47 DGLLKL--DGSVAFKTPEQSRVDPYFMAPEV-IQGQSYTEKADIYS---LGITLYEALDYELPYNEERE-----LSAILE  115 (176)
T ss_pred             ccceee--ccceEeeccccCCCcccccChHH-hcCCCCcchhhHHH---HHHHHHHHHhCCCCccccch-----hcHHHH
Confidence            456777  998874       8899999998 44555678999999   88889999999887532111     111111


Q ss_pred             HhhhCCCeeeeccccccccccHHHH--HHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           75 KLWCEGNVQELMDPVLKESFILEEI--LKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        75 ~~~~~~~~~~~~d~~l~~~~~~~~~--~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....  ... .++.-.. ......  ..+.++...|++.+|.+||++.++++.+..
T Consensus       116 ~~~~~--~~~-~~~~~~~-~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      116 ILLNG--MPA-DDPRDRS-NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHH--hcc-CCccccc-cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            11110  000 1111000 011111  257889999999999999999999987653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.26  E-value=1e-12  Score=96.34  Aligned_cols=107  Identities=19%  Similarity=0.201  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+++..+ |+.+....   ...
T Consensus       136 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---~G~~l~el~~~g~~p~~~~---~~~  208 (256)
T cd05114         136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV-FNFSKYSSKSDVWS---FGVLMWEVFTEGKMPFEKK---SNY  208 (256)
T ss_pred             CCeEEECCCCCccccCCCceeccCCCCCchhhCChhh-cccCccchhhhhHH---HHHHHHHHHcCCCCCCCCC---CHH
Confidence            56789999998874             2357999998 44445678899999   8888888888 55543211   111


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ....+    ...+.  ....+..       ....+..++.+|++.+|.+||+|.++++.|.
T Consensus       209 ~~~~~----i~~~~--~~~~~~~-------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         209 EVVEM----ISRGF--RLYRPKL-------ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             HHHHH----HHCCC--CCCCCCC-------CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            11111    11111  1111111       1135678999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.26  E-value=1.1e-12  Score=104.62  Aligned_cols=109  Identities=19%  Similarity=0.063  Sum_probs=76.4

Q ss_pred             CcccceeeeeEeecC----------C---CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE----------G---RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------g---t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      ||-.+||+||||+|.          |   .+.|.|||- +...+-..|+|||.   ||+.+.|++|=+++.-.     +.
T Consensus       400 EnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEs-LAyNtFSiKSDVWA---FGVLLWEIATYGMsPYP-----Gi  470 (1157)
T KOG4278|consen  400 ENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNTFSIKSDVWA---FGVLLWEIATYGMSPYP-----GI  470 (1157)
T ss_pred             ccceEEeeccchhhhhcCCceecccCccCcccccCccc-ccccccccchhhHH---HHHHHHHHHhcCCCCCC-----Cc
Confidence            466789999999998          1   257999997 44556678899999   77778888885544311     11


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      .+ ..+..+++         ...+-+.++.|..++.++...||+.+|.+||++.|+-+.++
T Consensus       471 dl-SqVY~LLE---------kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  471 DL-SQVYGLLE---------KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             cH-HHHHHHHh---------ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence            11 11222333         22222335667778999999999999999999999977765

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.26  E-value=1.1e-12  Score=96.74  Aligned_cols=108  Identities=17%  Similarity=0.046  Sum_probs=70.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               .+..|++||+ ......+.++|+|+   ||+.+++.+| |..+.....   
T Consensus       143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~s---lG~il~ell~~g~~p~~~~~---  215 (268)
T cd05063         143 NLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA-IAYRKFTSASDVWS---FGIVMWEVMSFGERPYWDMS---  215 (268)
T ss_pred             CCcEEECCCccceecccccccceeccCCCcCceecCHHH-hhcCCcChHhHHHH---HHHHHHHHHhCCCCCCCcCC---
Confidence            46789999998874               1235999998 43455678899999   7777888777 666542211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ... .......+.    ..+     ........+.+++..|++.+|++||+|.+|++.|+.
T Consensus       216 ---~~~-~~~~i~~~~----~~~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         216 ---NHE-VMKAINDGF----RLP-----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             ---HHH-HHHHHhcCC----CCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               011 111111110    000     111223457889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.26  E-value=1.2e-12  Score=105.04  Aligned_cols=104  Identities=19%  Similarity=0.083  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||.+|+|||+ +.....+.++|+|+   ||+.+++.++|+.+....      
T Consensus       179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~-~~~~~~s~k~DVwS---lGvilyeLltG~~Pf~~~------  248 (496)
T PTZ00283        179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEI-WRRKPYSKKADMFS---LGVLLYELLTLKRPFDGE------  248 (496)
T ss_pred             CCCEEEEecccCeeccccccccccccccCCcceeCHHH-hCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCCC------
Confidence            56799999999863              7889999998 44555678999999   888888999988764321      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......... .+.    .++ +..    .....+..+...|++.+|.+||++.+++.
T Consensus       249 ~~~~~~~~~~-~~~----~~~-~~~----~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        249 NMEEVMHKTL-AGR----YDP-LPP----SISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             CHHHHHHHHh-cCC----CCC-CCC----CCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            1111111111 111    111 111    11234667888999999999999999875

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.25  E-value=1.3e-12  Score=96.53  Aligned_cols=108  Identities=14%  Similarity=0.037  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.           .+..|+|||+ ......+.++|+|+   ||+.+++.++ |..+....      ..
T Consensus       148 ~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~pf~~~------~~  217 (270)
T cd05047         148 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWS---YGVLLWEIVSLGGTPYCGM------TC  217 (270)
T ss_pred             CCeEEECCCCCccccchhhhccCCCCccccCChHH-HccCCCCchhhHHH---HHHHHHHHHcCCCCCcccc------CH
Confidence            56789999999863           2456999998 44556678899999   7777888886 65553211      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .......+..   .+  .    .......+.++...|++.+|.+||++.+++..|+.
T Consensus       218 ~~-~~~~~~~~~~---~~--~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         218 AE-LYEKLPQGYR---LE--K----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             HH-HHHHHhCCCC---CC--C----CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            01 1111111100   00  1    11122356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=6.9e-12  Score=96.00  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=71.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ++.+|++|||.+-.            ||+.|||||+ ........|.|+|+   +|+..+|+++|.-|......      
T Consensus       147 ~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEV-I~~~~Y~~KADIWS---LGITaiEla~GePP~s~~hP------  216 (467)
T KOG0201|consen  147 SGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEV-IKQSGYDTKADIWS---LGITAIELAKGEPPHSKLHP------  216 (467)
T ss_pred             cCcEEEEecceeeeeechhhccccccccccccchhh-hccccccchhhhhh---hhHHHHHHhcCCCCCcccCc------
Confidence            57899999998875            9999999999 44556678999999   88889999998876543211      


Q ss_pred             hhhhHHhhhCCCeeeec----cccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELM----DPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~----d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                                -++.-++    -|.|.+.+.    ..+-+....|++.+|+.||+..+.++
T Consensus       217 ----------mrvlflIpk~~PP~L~~~~S----~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  217 ----------MRVLFLIPKSAPPRLDGDFS----PPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             ----------ceEEEeccCCCCCccccccC----HHHHHHHHHHhhcCcccCcCHHHHhh
Confidence                      1122222    234444322    23556667899999999999998863

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.25  E-value=2.6e-12  Score=94.76  Aligned_cols=108  Identities=14%  Similarity=0.081  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|++||+ ......+.++|+|+   ||+.+.+.++|..+....      ...
T Consensus       150 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~Dv~s---lG~ll~~l~~g~~p~~~~------~~~  219 (269)
T cd08528         150 DDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEI-VKNEPYGEKADVWA---FGCILYQMCTLQPPFYST------NML  219 (269)
T ss_pred             CCcEEEecccceeecccccccccccCcccCcChhh-hcCCCCchHHHHHH---HHHHHHHHHhCCCccccc------CHH
Confidence            46789999998864           7789999998 43455678899999   777788888987664211      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      .... ....+..    .+.....+    ...+.++..+|++.+|++||+|.+|..+|.
T Consensus       220 ~~~~-~~~~~~~----~~~~~~~~----~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         220 SLAT-KIVEAVY----EPLPEGMY----SEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHH-HHhhccC----CcCCcccC----CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1111 1111111    11001111    134567788999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.25  E-value=1.4e-12  Score=96.96  Aligned_cols=108  Identities=11%  Similarity=-0.049  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+.++ |..+...   .. 
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~~~g~~p~~~---~~-  231 (283)
T cd05090         160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEA-IMYGKFSSDSDIWS---FGVVLWEIFSFGLQPYYG---FS-  231 (283)
T ss_pred             CCcEEeccccccccccCCcceecccCCCccceecChHH-hccCCCCchhhhHH---HHHHHHHHHcCCCCCCCC---CC-
Confidence            46789999999863              3456999998 43455678899999   7777888887 4433211   00 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..........+...     ..    +......+..+...|++.+|.+||++.+|.+.|..
T Consensus       232 ---~~~~~~~~~~~~~~-----~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         232 ---NQEVIEMVRKRQLL-----PC----SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ---HHHHHHHHHcCCcC-----CC----CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence               00111111111110     01    11122356678889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.24  E-value=7.5e-13  Score=98.15  Aligned_cols=108  Identities=12%  Similarity=0.003  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+.+++ ..+....     
T Consensus       155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~~~~p~~~~-----  225 (277)
T cd05062         155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWS---FGVVLWEIATLAEQPYQGM-----  225 (277)
T ss_pred             CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhH-hhcCCcCchhHHHH---HHHHHHHHHcCCCCCCCCC-----
Confidence            56789999998863              3567999998 44455678899999   77778888883 4332110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .... .......+....     +    +......+.++..+|++.+|++||++.++++.|+.
T Consensus       226 -~~~~-~~~~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         226 -SNEQ-VLRFVMEGGLLD-----K----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             -CHHH-HHHHHHcCCcCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence             0000 111111111100     1    11122356788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.24  E-value=1.2e-12  Score=95.47  Aligned_cols=107  Identities=14%  Similarity=0.005  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+++..+ |..+.....     
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~ll~~~~~~g~~p~~~~~-----  199 (250)
T cd05085         129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEA-LNYGRYSSESDVWS---YGILLWETFSLGVCPYPGMT-----  199 (250)
T ss_pred             CCeEEECCCccceeccccccccCCCCCCcccccCHHH-hccCCCCchhHHHH---HHHHHHHHhcCCCCCCCCCC-----
Confidence            45689999998864             2456999998 55566778899999   7777777777 554432110     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       . .........+...     .    .+......+..+...|++.+|.+||+|.++++.|.
T Consensus       200 -~-~~~~~~~~~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         200 -N-QQAREQVEKGYRM-----S----CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             -H-HHHHHHHHcCCCC-----C----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence             0 0111111111100     1    11112346778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.24  E-value=1.9e-12  Score=95.40  Aligned_cols=108  Identities=18%  Similarity=0.051  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+++.++ |..+.....    
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~-~~~~~~~~~~Dv~s---lG~~l~~l~~~g~~p~~~~~----  213 (266)
T cd05033         142 NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEA-IAYRKFTSASDVWS---FGIVMWEVMSYGERPYWDMS----  213 (266)
T ss_pred             CCCEEECccchhhcccccccceeccCCCCCccccChhh-hccCCCccccchHH---HHHHHHHHHccCCCCCCCCC----
Confidence            56789999998874              2357999998 44455678899999   7777777776 554432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..........+.    ..+.     +......+.++...|++.+|++||++.+|++.|+.
T Consensus       214 ---~~~~~~~~~~~~----~~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         214 ---NQDVIKAVEDGY----RLPP-----PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             ---HHHHHHHHHcCC----CCCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               001111111110    0000     11122456789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.23  E-value=1.5e-12  Score=95.41  Aligned_cols=108  Identities=17%  Similarity=0.045  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+++.++ |..+.....+  
T Consensus       131 ~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~~~~~g~~p~~~~~~--  204 (257)
T cd05060         131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPEC-INYGKFSSKSDVWS---YGVTLWEAFSYGAKPYGEMKG--  204 (257)
T ss_pred             CCcEEeccccccceeecCCcccccccCccccccccCHHH-hcCCCCCccchHHH---HHHHHHHHHcCCCCCcccCCH--
Confidence            46789999999874               2356999998 44556678899999   8888888887 6655432111  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ..+..+    ...+....         .+......+.++..+|++.+|++||++.++++.|+.
T Consensus       205 -~~~~~~----~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~  254 (257)
T cd05060         205 -AEVIAM----LESGERLP---------RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR  254 (257)
T ss_pred             -HHHHHH----HHcCCcCC---------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence             111111    11111100         011122456789999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.23  E-value=1.3e-12  Score=95.77  Aligned_cols=106  Identities=15%  Similarity=0.068  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+.+.+| |..+.... ...  
T Consensus       136 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~-~~~--  208 (256)
T cd05059         136 DNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEV-FDYSRFSSKSDVWS---FGVLMWEVFSEGKMPYERF-SNS--  208 (256)
T ss_pred             CCcEEECCcccceecccccccccCCCCCCccccCHHH-hccCCCCchhhHHH---HHHHHHHHhccCCCCCCCC-CHH--
Confidence            45789999998874             2246999998 43445667899999   8888888888 45443211 100  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ..    ......+     .....    +......+.+++.+|++.+|++||+|.++++.|
T Consensus       209 ~~----~~~~~~~-----~~~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         209 EV----VESVSAG-----YRLYR----PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HH----HHHHHcC-----CcCCC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            01    1111111     01111    111234577899999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.23  E-value=1.4e-11  Score=100.98  Aligned_cols=110  Identities=18%  Similarity=0.051  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC----------CC-----CCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GR-----TGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt-----~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      |..+||||||++|.          ++     ..|||||. .....-+.++||||   ||+.+.|..|-+-..-   +.  
T Consensus       454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEs-l~~~~ft~kSDVWS---fGI~L~EifsLG~~PY---p~--  524 (609)
T KOG0200|consen  454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPES-LFDRVFTSKSDVWS---FGILLWEIFTLGGTPY---PG--  524 (609)
T ss_pred             CCEEEEccccceeccCCCCceEecCCCCccceeecCHHH-hccCcccccchhhH---HHHHHHHHhhCCCCCC---CC--
Confidence            56789999999994          22     34999998 44577889999999   6665666665332211   10  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....-+...+.+|..         .+.+..+...+..++..||+.+|.+||+..+.++.++.
T Consensus       525 ~~~~~~l~~~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  525 IPPTEELLEFLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             CCcHHHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            1101111223333331         11233445567889999999999999999999998877

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.23  E-value=2.1e-12  Score=96.81  Aligned_cols=108  Identities=14%  Similarity=0.016  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.           .+..|++||+ ......+.++|+|+   ||+.+.+.+| |..+....      ..
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DvwS---lG~il~el~t~g~~pf~~~------~~  224 (297)
T cd05089         155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIES-LNYSVYTTKSDVWS---FGVLLWEIVSLGGTPYCGM------TC  224 (297)
T ss_pred             CCeEEECCcCCCccccceeccCCCCcCccccCchh-hccCCCCchhhHHH---HHHHHHHHHcCCCCCCCCC------CH
Confidence            56789999999863           2346999998 43445678899999   7777888887 65543211      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .......+.     ......    .....+.++...|++.+|.+||++.++++.|+.
T Consensus       225 ~~-~~~~~~~~~-----~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  274 (297)
T cd05089         225 AE-LYEKLPQGY-----RMEKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSR  274 (297)
T ss_pred             HH-HHHHHhcCC-----CCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11 111111110     111111    122346788899999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.23  E-value=2.2e-12  Score=95.71  Aligned_cols=108  Identities=15%  Similarity=0.044  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+..+ |+.+....   ..
T Consensus       153 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~---~~  225 (280)
T cd05043         153 ELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALES-LVNKEYSSASDVWS---FGVLLWELMTLGQTPYVEI---DP  225 (280)
T ss_pred             CCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHH-HhcCCCCchhhHHH---hHHHHHHHhcCCCCCcCcC---CH
Confidence            46789999999874              3457999998 43445678899999   7778888888 66553221   11


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+..    ....+.  ..   ..    .......+.++..+|++.+|++||++.+|++.|+.
T Consensus       226 ~~~~~----~~~~~~--~~---~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  275 (280)
T cd05043         226 FEMAA----YLKDGY--RL---AQ----PINCPDELFAVMACCWALDPEERPSFSQLVQCLTD  275 (280)
T ss_pred             HHHHH----HHHcCC--CC---CC----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            11111    111111  00   00    11112356788999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.23  E-value=2.1e-12  Score=95.75  Aligned_cols=120  Identities=12%  Similarity=0.024  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|++||+ ......+.++|+|+   ||+.+++.+||..+........ 
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~Di~s---lG~~l~el~tg~~p~~~~~~~~-  219 (284)
T cd05038         145 EDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPEC-LRTSKFSSASDVWS---FGVTLYELFTYGDPSQSPPAEF-  219 (284)
T ss_pred             CCCEEEcccccccccccCCcceeccCCCCCcccccCcHH-HccCCCCcccchHH---HhhhhheeeccCCCcccccchh-
Confidence            46789999998875               1245999998 33445678899999   7777888888876643321111 


Q ss_pred             cchhhhhHHhhhC---CCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCE---GNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..+.......   ....+.+........+..+...+.+++.+|++.+|.+||+|.+|+++|+.
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         220 ---LRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             ---ccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence               0000000000   00001111111111111223467789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.23  E-value=1.4e-12  Score=96.92  Aligned_cols=116  Identities=12%  Similarity=-0.009  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+++.+++..+.....    
T Consensus       144 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~~~~~~~~~----  215 (284)
T cd05081         144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES-LTESKFSVASDVWS---FGVVLYELFTYSDKSCSPP----  215 (284)
T ss_pred             CCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHH-hccCCcChHHHHHH---HHHHHHHHhhcCCcCCCcc----
Confidence            56789999999884               1234899998 44455678899999   7777888887643321110    


Q ss_pred             cchhhhhHHhhhCCCe--------eeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNV--------QELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~--------~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..+. ........        .+.+...............+.+++..|++.+|++||++.+|++.|+.
T Consensus       216 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         216 ---AEFM-RMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             ---hhhh-hhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence               0000 00000000        00111100000011222457789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.23  E-value=1.9e-12  Score=95.76  Aligned_cols=107  Identities=19%  Similarity=0.064  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+...   ...
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~---~~~  227 (277)
T cd05032         155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES-LKDGVFTTKSDVWS---FGVVLWEMATLAEQPYQG---LSN  227 (277)
T ss_pred             CCCEEECCcccchhhccCcccccCCCCCccccccCHHH-HhcCCCCcccchHH---HHHHHHHhhccCCCCCcc---CCH
Confidence            56789999998863              3568999998 44455678899999   7777888887 5544321   100


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ..+    ......+...     ....    .....+..+...|++.+|++||++.+++..|+
T Consensus       228 ~~~----~~~~~~~~~~-----~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         228 EEV----LKFVIDGGHL-----DLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHH----HHHHhcCCCC-----CCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            011    1111111111     1111    12345778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.22  E-value=5.5e-12  Score=94.57  Aligned_cols=113  Identities=8%  Similarity=0.015  Sum_probs=74.1

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +.++||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.++++++|..|.....
T Consensus       162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~-~~~~~~~~~~DiwS---lG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDA-HNGACVTRRGDLES---LGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHH-hCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCccc
Confidence            46789999999852                   7899999998 44555688999999   8888999999988865431


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ..+  .+.......+    +..+....+.   ...+...+.++...|++.+|++||++.++.+.|
T Consensus       238 ~~~--~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        238 HNG--NLIHAAKCDF----IKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             cch--HHHHHhHHHH----HHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            111  1111111000    0011111110   011224567788899999999999999999876

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.22  E-value=1.4e-12  Score=96.84  Aligned_cols=106  Identities=12%  Similarity=0.000  Sum_probs=68.3

Q ss_pred             ccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            3 AKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         3 ~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      ..+||+|||+++.              .+..|+|||+ +.....+.++|+|+   ||+.++++.+ |..+......    
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~~g~~pf~~~~~----  227 (277)
T cd05036         156 RVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEA-FLDGIFTSKTDVWS---FGVLLWEIFSLGYMPYPGRTN----  227 (277)
T ss_pred             cceEeccCccccccCCccceecCCCCCccHhhCCHHH-HhcCCcCchhHHHH---HHHHHHHHHcCCCCCCCCCCH----
Confidence            4589999999874              1346999998 44556788999999   7777888776 5544321100    


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                        .. .........         ....+......+.++...|++.+|++||++.+|++.|+
T Consensus       228 --~~-~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         228 --QE-VMEFVTGGG---------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             --HH-HHHHHHcCC---------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence              00 111111110         00111122245678889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.22  E-value=2.5e-12  Score=95.30  Aligned_cols=107  Identities=13%  Similarity=-0.032  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   +|+.+.+..+ |..+....   ..
T Consensus       158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~e~~~~g~~p~~~~---~~  230 (280)
T cd05049         158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPES-IMYRKFTTESDVWS---FGVVLWEIFTYGKQPWYGL---SN  230 (280)
T ss_pred             CCeEEECCcccceecccCcceecCCCCcccceecChhh-hccCCcchhhhHHH---HHHHHHHHHhcCCCCCCCC---CH
Confidence            46789999998863              2457999998 44556678899999   7877888888 66543211   11


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ...+.    ....+.... .        +......+..+...|++.+|++||++.||++.|+
T Consensus       231 ~~~~~----~~~~~~~~~-~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         231 EEVIE----CITQGRLLQ-R--------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHH----HHHcCCcCC-C--------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            11111    111121111 0        1112235678889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.22  E-value=4.2e-12  Score=102.38  Aligned_cols=103  Identities=13%  Similarity=-0.061  Sum_probs=74.6

Q ss_pred             cceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            4 KQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         4 ~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      .+|||||||.|.               -.+.|-|||. ++...-+.++|||.   ||+.+.|..|.+--.          
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEs-Lrh~kFShaSDvWm---yGVTiWEMFtyGEeP----------  315 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPES-LRHRKFSHASDVWM---YGVTIWEMFTYGEEP----------  315 (1039)
T ss_pred             eeeeecccceeccCCCCcceEecCCCcCcccccCHhH-hccccccccchhhh---hhhhHHhhhccCCCC----------
Confidence            479999999996               2368999998 77888899999999   777777766643221          


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         |+  -...-.+.+.+|..-+-.-++.|.+.+..+++.||.++|.+||++..+++
T Consensus       316 ---W~--G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  316 ---WV--GCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             ---CC--CCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence               11  11111244555644333335677789999999999999999999999974

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.21  E-value=5.3e-12  Score=92.72  Aligned_cols=108  Identities=15%  Similarity=0.009  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+.+.++ |..+...   ....
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~~g~~p~~~---~~~~  210 (260)
T cd05070         138 GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELVTKGRVPYPG---MNNR  210 (260)
T ss_pred             CceEEeCCceeeeeccCcccccccCCCCCccccChHH-HhcCCCcchhhhHH---HHHHHHHHHhcCCCCCCC---CCHH
Confidence            45689999999864             2357999998 44556678999999   8888888888 4443321   1110


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....    ....+.     ...    .+......+.++..+|++.+|.+||++.++.+.|+.
T Consensus       211 ~~~~----~~~~~~-----~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         211 EVLE----QVERGY-----RMP----CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHH----HHHcCC-----CCC----CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1111    111110     000    111222457789999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.21  E-value=4.7e-12  Score=95.29  Aligned_cols=108  Identities=15%  Similarity=0.026  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.           ++..|+|||+ ......+.++|+|+   ||+.+.+.+| |..+.....      .
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~~------~  229 (303)
T cd05088         160 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWS---YGVLLWEIVSLGGTPYCGMT------C  229 (303)
T ss_pred             CCcEEeCccccCcccchhhhcccCCCcccccCHHH-HhccCCcccccchh---hhhHHHHHHhcCCCCcccCC------h
Confidence            46789999999863           2457999998 44445678899999   7777888887 665532110      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ... ......+.       ..  ..+......+.++..+|++.+|++||++.++++.|+.
T Consensus       230 ~~~-~~~~~~~~-------~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         230 AEL-YEKLPQGY-------RL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             HHH-HHHHhcCC-------cC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            000 11111110       00  0011112346778899999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.21  E-value=1.9e-12  Score=97.30  Aligned_cols=107  Identities=14%  Similarity=0.079  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ||..|||||+..........+|+|+   +|..+||..||+.+....     
T Consensus       154 ~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWS---lGCtVvEM~Tg~~PW~~~-----  225 (313)
T KOG0198|consen  154 NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWS---LGCTVVEMLTGKPPWSEF-----  225 (313)
T ss_pred             CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhh---cCCEEEeccCCCCcchhh-----
Confidence            46899999998873               8999999999332222335899999   888899999997775432     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....+........     .-|.+..    .......+....|.+.+|.+|||+.+.+.
T Consensus       226 ~~~~~~~~~ig~~~-----~~P~ip~----~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  226 FEEAEALLLIGRED-----SLPEIPD----SLSDEAKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             cchHHHHHHHhccC-----CCCCCCc----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            11222222121111     1122211    11123345566899999999999999876

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.21  E-value=2.4e-12  Score=94.61  Aligned_cols=108  Identities=12%  Similarity=-0.003  Sum_probs=70.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+.+.++ |..+......  
T Consensus       131 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~~~--  204 (257)
T cd05115         131 QHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPEC-INFRKFSSRSDVWS---YGITMWEAFSYGQKPYKKMKG--  204 (257)
T ss_pred             CCcEEeccCCccccccCCccceeccCCCCCCcccCCHHH-HccCCCCchhhHHH---HHHHHHHHhcCCCCCcCcCCH--
Confidence            45789999998863               1357999998 43445677899999   7777888776 6655432111  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .. +......+...         ..+..+...+.++...|++.+|++||+|.+|.+.|+.
T Consensus       205 ----~~-~~~~~~~~~~~---------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         205 ----PE-VMSFIEQGKRL---------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             ----HH-HHHHHHCCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence                11 11122222110         0111223456678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.21  E-value=9.7e-12  Score=91.54  Aligned_cols=111  Identities=13%  Similarity=-0.021  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+.+|+|||+ ......+.++|+|+   ||+.+.+..+|..+....    ....
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~----~~~~  213 (267)
T cd08229         142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER-IHENGYNFKSDIWS---LGCLLYEMAALQSPFYGD----KMNL  213 (267)
T ss_pred             CCCEEECcchhhhccccCCcccccccCCcCccCHHH-hcCCCccchhhHHH---HHHHHHHHHhCCCCcccc----cchH
Confidence            45789999998753            6778999998 44455677899999   888888888988764211    0000


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....      .+.....+.+..   ......+..+...|++.+|.+||+|.+|+++++.
T Consensus       214 ~~~~~------~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         214 YSLCK------KIEQCDYPPLPS---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             HHHhh------hhhcCCCCCCCc---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence            01000      011111122111   1122346677789999999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.21  E-value=1.8e-12  Score=95.18  Aligned_cols=108  Identities=15%  Similarity=-0.009  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.            ++..|++||. ......+.++|+|+   ||+.+.+..+ |..+.....   ...
T Consensus       140 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~Diws---lG~~l~~l~~~g~~p~~~~~---~~~  212 (261)
T cd05148         140 DLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEA-ASHGTFSTKSDVWS---FGILLYEMFTYGQVPYPGMN---NHE  212 (261)
T ss_pred             CceEEEccccchhhcCCccccccCCCCceEecCHHH-HccCCCCchhhHHH---HHHHHHHHHcCCCCCCCcCC---HHH
Confidence            45789999999864            3457999998 44455677899999   8878888887 555442211   001


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...+    ...+.     ....    +......+.+++.+|++.+|.+||++.++.+.|+.
T Consensus       213 ~~~~----~~~~~-----~~~~----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         213 VYDQ----ITAGY-----RMPC----PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHH----HHhCC-----cCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            1111    11110     0001    11222456788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.21  E-value=2.9e-12  Score=93.64  Aligned_cols=107  Identities=18%  Similarity=0.059  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              .+..|+|||+ ......+.++|+|+   +|+.+.+..+ |..+......   
T Consensus       130 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~e~~~~~~~p~~~~~~---  202 (252)
T cd05084         130 KNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEA-LNYGRYSSESDVWS---FGILLWEAFSLGAVPYANLSN---  202 (252)
T ss_pred             CCcEEECccccCcccccccccccCCCCCCceeecCchh-hcCCCCChHHHHHH---HHHHHHHHHhCCCCCccccCH---
Confidence            45689999999874              1235999998 44555677899999   7777888777 4443321100   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                          .........+         .....+......+.++...|++.+|++||++.+|.++|+
T Consensus       203 ----~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         203 ----QQTREAIEQG---------VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ----HHHHHHHHcC---------CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence                0111111111         000111122345778889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.21  E-value=6.6e-12  Score=93.09  Aligned_cols=104  Identities=16%  Similarity=0.115  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+|++|||+++.            |+..|++||+ ......+.++|+|+   ||+.+++.+||..+.......   ..
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~tg~~p~~~~~~~---~~  209 (277)
T cd06642         137 QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV-IKQSAYDFKADIWS---LGITAIELAKGEPPNSDLHPM---RV  209 (277)
T ss_pred             CCCEEEccccccccccCcchhhhcccCcccccCHHH-hCcCCCchhhhHHH---HHHHHHHHHhCCCCCcccchh---hH
Confidence            56789999998864            5778999998 44445677899999   788888889998775322111   00


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..    ....+     ..+.+..    .....+.++...|++.+|++||+|.+|+.
T Consensus       210 ~~----~~~~~-----~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         210 LF----LIPKN-----SPPTLEG----QYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             Hh----hhhcC-----CCCCCCc----ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            00    11111     1112211    12235677888999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.21  E-value=2.9e-12  Score=96.38  Aligned_cols=108  Identities=16%  Similarity=0.002  Sum_probs=69.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++..+ |..+...      
T Consensus       173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~------  242 (304)
T cd05101         173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGVLMWEIFTLGGSPYPG------  242 (304)
T ss_pred             CCcEEECCCccceecccccccccccCCCCCceeeCchh-hccCCCCchhhHHH---HHHHHHHHHcCCCCCccc------
Confidence            45789999999874              2457999998 33445677899999   7777888887 3333211      


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..... .......+...   +      .+......+..+...|++.+|.+||+|.+|++.|+.
T Consensus       243 ~~~~~-~~~~~~~~~~~---~------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~  295 (304)
T cd05101         243 IPVEE-LFKLLKEGHRM---D------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR  295 (304)
T ss_pred             CCHHH-HHHHHHcCCcC---C------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            01111 11112111110   0      011223456678889999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.21  E-value=3e-12  Score=94.12  Aligned_cols=108  Identities=16%  Similarity=0.010  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|++||+ ......+.++|+|+   ||+.+++.+| |..+.......   
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~~~~---  210 (260)
T cd05069         138 NLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELVTKGRVPYPGMVNR---  210 (260)
T ss_pred             CCeEEECCCccceEccCCcccccCCCccchhhCCHHH-hccCCcChHHHHHH---HHHHHHHHHhCCCCCCCCCCHH---
Confidence            56789999999863             3457999998 44556778899999   8888889888 55543221100   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....    ....+.     ...    .+......+..+..+|++.+|.+||++.+|.+.|+.
T Consensus       211 ~~~~----~~~~~~-----~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         211 EVLE----QVERGY-----RMP----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHH----HHHcCC-----CCC----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            1111    111110     000    111222456778889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.21  E-value=1.7e-12  Score=95.26  Aligned_cols=107  Identities=15%  Similarity=-0.010  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|++||+ ......+.++|+|+   ||+.+.+..| |..+.... .    
T Consensus       136 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Di~s---lG~~l~~l~~~g~~p~~~~-~----  206 (256)
T cd05113         136 QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LLYSKFSSKSDVWA---FGVLMWEVYSLGKMPYERF-N----  206 (256)
T ss_pred             CCCEEECCCccceecCCCceeecCCCccChhhCCHHH-HhcCcccchhHHHH---HHHHHHHHhcCCCCCcCcC-C----
Confidence            46799999998773             3457999998 43445677899999   7777888887 65543211 0    


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       ... ......++...    . .    +......+.++...|++.+|.+||++.+++..|+
T Consensus       207 -~~~-~~~~~~~~~~~----~-~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         207 -NSE-TVEKVSQGLRL----Y-R----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             -HHH-HHHHHhcCCCC----C-C----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence             000 11111111110    0 0    0111245678888999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.21  E-value=4.3e-12  Score=92.90  Aligned_cols=108  Identities=18%  Similarity=0.024  Sum_probs=70.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++.+|++||+ ......+.++|+|+   ||+.+++..| |..+.....   
T Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~~---  205 (257)
T cd05040         133 DDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES-LRTRTFSHASDVWM---FGVTLWEMFTYGEEPWAGLS---  205 (257)
T ss_pred             CCEEEeccccccccccccccceecccCCCCCceecCHHH-hcccCcCchhhhHH---HHHHHHHHHhCCCCCCCCCC---
Confidence            46789999998764               4568999998 54556778899999   8888888888 666542110   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                         ..............  ...       +......+..+...|++.+|.+||++.+|++.|.
T Consensus       206 ---~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         206 ---GSQILKKIDKEGER--LER-------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             ---HHHHHHHHHhcCCc--CCC-------CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence               11111111111100  000       1112245777888999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.20  E-value=2.5e-12  Score=94.28  Aligned_cols=108  Identities=13%  Similarity=-0.049  Sum_probs=70.8

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         ++..|+|||+ ......+.++|+|+   ||+.+++..+ |+.+....      .+..
T Consensus       138 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~i~~~l~~~g~~p~~~~------~~~~  207 (256)
T cd05082         138 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEA-LREKKFSTKSDVWS---FGILLWEIYSFGRVPYPRI------PLKD  207 (256)
T ss_pred             CCcEEecCCccceeccccCCCCccceeecCHHH-HccCCCCchhhhHH---HHHHHHHHHhCCCCCCCCC------CHHH
Confidence            56789999999885         3457999998 44555677899999   7778888887 55543211      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .....+..     +.+..    .....+..+...|++.+|++||++.++++.|+.
T Consensus       208 ~~-~~~~~~~~-----~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         208 VV-PRVEKGYK-----MDAPD----GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HH-HHHhcCCC-----CCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            11 11111110     01111    122356678889999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.20  E-value=2.7e-12  Score=95.41  Aligned_cols=108  Identities=13%  Similarity=-0.072  Sum_probs=69.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.++++.+ |..+.... ..  
T Consensus       158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~~-~~--  230 (280)
T cd05092         158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES-ILYRKFTTESDIWS---FGVVLWEIFTYGKQPWYQL-SN--  230 (280)
T ss_pred             CCCEEECCCCceeEcCCCceeecCCCccccccccCHHH-hccCCcCchhhHHH---HHHHHHHHHcCCCCCCccC-CH--
Confidence            56799999999863              2457999998 44455678899999   8888888888 55442211 10  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..... ....+..  .   ..    +......+.++...|++.+|.+||++.+|.+.|+.
T Consensus       231 ---~~~~~-~~~~~~~--~---~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         231 ---TEAIE-CITQGRE--L---ER----PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ---HHHHH-HHHcCcc--C---CC----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence               00010 1111110  0   00    11112346688899999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.20  E-value=6.3e-12  Score=92.65  Aligned_cols=106  Identities=13%  Similarity=-0.029  Sum_probs=69.3

Q ss_pred             ccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            3 AKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         3 ~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      ..+|++|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.++.| |..+.....     
T Consensus       148 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~ellt~g~~p~~~~~-----  218 (269)
T cd05044         148 RVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPES-LLDGKFTTQSDVWS---FGVLMWEILTLGQQPYPALN-----  218 (269)
T ss_pred             cceEECCcccccccccccccccCcccCCCccccCHHH-HccCCcccchhHHH---HHHHHHHHHHcCCCCCcccC-----
Confidence            3789999998863              3578999998 44556678899999   7777888887 665432110     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       ..... .....+.       .+  .........+.++..+|++.+|.+||+|.+|.+.|+
T Consensus       219 -~~~~~-~~~~~~~-------~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         219 -NQEVL-QHVTAGG-------RL--QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             -HHHHH-HHHhcCC-------cc--CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence             00100 0111111       00  011112245678888999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.20  E-value=2.4e-12  Score=96.10  Aligned_cols=108  Identities=13%  Similarity=-0.012  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+.+| |..+.....    
T Consensus       156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDiws---lG~il~~l~t~g~~p~~~~~----  227 (288)
T cd05093         156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES-IMYRKFTTESDVWS---LGVVLWEIFTYGKQPWYQLS----  227 (288)
T ss_pred             CCcEEeccCCccccccCCceeecCCCCCccccccCHHH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCCC----
Confidence            45789999999873              2457999998 44455677899999   8888888888 554432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .. ........+....     .....+    ..+.++...|++.+|.+||++.+|.+.|+.
T Consensus       228 --~~-~~~~~i~~~~~~~-----~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~  278 (288)
T cd05093         228 --NN-EVIECITQGRVLQ-----RPRTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQN  278 (288)
T ss_pred             --HH-HHHHHHHcCCcCC-----CCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence              00 0111111221110     111112    347889999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.19  E-value=2.7e-12  Score=94.77  Aligned_cols=108  Identities=15%  Similarity=0.033  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++.++ |..+...   .. 
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~---~~-  219 (272)
T cd05075         148 NMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIES-LADRVYTTKSDVWS---FGVTMWEIATRGQTPYPG---VE-  219 (272)
T ss_pred             CCCEEECCCCcccccCcccceecCCcccCCcccCCHHH-ccCCCcChHHHHHH---HHHHHHHHHcCCCCCCCC---CC-
Confidence            56799999999874              2346889988 44455678899999   8888888888 4433221   11 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .. ........+....     .    .......+.+++..|++.+|.+||++.++++.|+.
T Consensus       220 --~~-~~~~~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         220 --NS-EIYDYLRQGNRLK-----Q----PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             --HH-HHHHHHHcCCCCC-----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence              10 1111222221100     0    11122346788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.19  E-value=6.7e-12  Score=91.69  Aligned_cols=104  Identities=11%  Similarity=-0.050  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ ......+.++|+|+   ||+.+.+.+||..+.....       
T Consensus       137 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~-------  205 (256)
T cd08529         137 YDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPEL-CEDKPYNEKSDVWA---LGVVLYECCTGKHPFDANN-------  205 (256)
T ss_pred             CCCEEEcccccceeccCccchhhccccCccccCHHH-hcCCCCCCccchHH---HHHHHHHHHhCCCCCCCCC-------
Confidence            46789999998774            6778999998 44455677899999   8888889999887653211       


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........+.    .. .+.    ......+.++..+|++.+|++||+|.++++
T Consensus       206 ~~~~~~~~~~~~----~~-~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         206 QGALILKIIRGV----FP-PVS----QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHHHHHcCC----CC-CCc----cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            001111111111    11 111    112245678888999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.18  E-value=3e-12  Score=95.03  Aligned_cols=108  Identities=11%  Similarity=-0.070  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||. ......+.++|+|+   ||+.+++.+| |..+.....   .
T Consensus       145 ~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~~l~el~t~g~~p~~~~~---~  217 (279)
T cd05109         145 PNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES-ILHRRFTHQSDVWS---YGVTVWELMTFGAKPYDGIP---A  217 (279)
T ss_pred             CCcEEECCCCceeecccccceeecCCCccchhhCCHHH-hccCCCCchhHHHH---HHHHHHHHHcCCCCCCCCCC---H
Confidence            45689999999874              2457999998 33445678899999   8888888888 555432110   0


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+..    ....+....     .    +......+..+...|++.+|+.||++.+++..|+.
T Consensus       218 ~~~~~----~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~  267 (279)
T cd05109         218 REIPD----LLEKGERLP-----Q----PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSR  267 (279)
T ss_pred             HHHHH----HHHCCCcCC-----C----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            01111    111111000     0    11122346678889999999999999999998876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.18  E-value=6.6e-12  Score=93.47  Aligned_cols=115  Identities=12%  Similarity=-0.018  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC--
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE--   64 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~--   64 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+++.+|++.+.......  
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lG~il~ellt~~~~~~~~~~~~~  220 (284)
T cd05079         145 EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC-LIQSKFYIASDVWS---FGVTLYELLTYCDSESSPMTLFL  220 (284)
T ss_pred             CCCEEECCCccccccccCccceeecCCCCCCccccCHHH-hccCCCCccccchh---hhhhhhhhhcCCCCCccccchhh
Confidence            46789999998873               3456999998 33445677899999   777788888765432211100  


Q ss_pred             ------CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 ------GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ------~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                            .+.............+...         .........+.++...|++.+|.+||++.++++.|+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         221 KMIGPTHGQMTVTRLVRVLEEGKRL---------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             hhcccccccccHHHHHHHHHcCccC---------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence                  0000011111111111100         0011223467889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.18  E-value=3.3e-11  Score=89.57  Aligned_cols=111  Identities=15%  Similarity=0.148  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..          |+..|+|||+ ......+.++|+|+   ||+.+.+.++|+.+..............
T Consensus       131 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~~l~~l~~g~~pf~~~~~~~~~~~~~  206 (279)
T cd06619         131 RGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPER-ISGEQYGIHSDVWS---LGISFMELALGRFPYPQIQKNQGSLMPL  206 (279)
T ss_pred             CCCEEEeeCCcceecccccccCCCCChhhcCcee-ecCCCCCCcchHHH---HHHHHHHHHhCCCCchhhcccccccchH
Confidence            46789999999873          6889999998 43445678899999   8888888899887754322211110000


Q ss_pred             hhHHhhhCCCeeeecccccc-ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLK-ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........     ...+.+. ...+    ..+.++...|++.+|..||++.++++
T Consensus       207 ~~~~~~~~-----~~~~~~~~~~~~----~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         207 QLLQCIVD-----EDPPVLPVGQFS----EKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             HHHHHHhc-----cCCCCCCCCcCC----HHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            00011100     0111111 1111    24567788999999999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.18  E-value=5.5e-12  Score=92.91  Aligned_cols=108  Identities=16%  Similarity=0.008  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|++||+ ......+.++|+|+   ||+.+.+.+| |..+.....     
T Consensus       138 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dvws---lG~~l~ellt~g~~p~~~~~-----  208 (262)
T cd05071         138 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELTTKGRVPYPGMV-----  208 (262)
T ss_pred             CCcEEeccCCceeeccccccccccCCcccceecCHhH-hccCCCCchhhHHH---HHHHHHHHHcCCCCCCCCCC-----
Confidence            45689999998863             3456999998 43455678899999   8888888888 443322110     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ..........+.     ..    .........+.++...|++.+|.+||++.++.+.|+.
T Consensus       209 --~~~~~~~~~~~~-----~~----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         209 --NREVLDQVERGY-----RM----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             --hHHHHHHHhcCC-----CC----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence              001111111110     00    0112233457789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.18  E-value=1.3e-11  Score=90.83  Aligned_cols=111  Identities=14%  Similarity=-0.050  Sum_probs=73.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ ......+.++|+|+   ||+.+.+..+|+.+....    ....
T Consensus       142 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~g~~p~~~~----~~~~  213 (267)
T cd08228         142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER-IHENGYNFKSDIWS---LGCLLYEMAALQSPFYGD----KMNL  213 (267)
T ss_pred             CCCEEECccccceeccchhHHHhcCCCCccccChhh-hccCCCCchhhHHH---HHHHHHHHhcCCCCCccc----cccH
Confidence            45789999998764            6778999998 33445567899999   888888888888764221    1111


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+.. ....     ...+.+.   .......+.++...|++.+|++||++.+|++.|++
T Consensus       214 ~~~~~-~~~~-----~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         214 FSLCQ-KIEQ-----CDYPPLP---TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             HHHHH-HHhc-----CCCCCCC---hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence            11111 1111     1111111   11122456778889999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.17  E-value=3.7e-12  Score=95.83  Aligned_cols=108  Identities=10%  Similarity=0.031  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++.++ |+.+.....    
T Consensus       145 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Diws---lG~~l~el~t~g~~p~~~~~----  216 (303)
T cd05110         145 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC-IHYRKFTHQSDVWS---YGVTIWELMTFGGKPYDGIP----  216 (303)
T ss_pred             CCceEEccccccccccCcccccccCCCccccccCCHHH-hccCCCChHHHHHH---HHHHHHHHHhCCCCCCCCCC----
Confidence            45789999999974              2457999998 44455678899999   7878888887 555432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        . .........+..  .-.+   .    .+...+..+...|+..+|++||+|.++++.|+.
T Consensus       217 --~-~~~~~~~~~~~~--~~~~---~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~  267 (303)
T cd05110         217 --T-REIPDLLEKGER--LPQP---P----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR  267 (303)
T ss_pred             --H-HHHHHHHHCCCC--CCCC---C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              0 111111111110  0001   1    112356778899999999999999999998876

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.17  E-value=6.9e-12  Score=94.41  Aligned_cols=109  Identities=15%  Similarity=0.028  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+|++|||+++.              ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+.....    
T Consensus       177 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lGvil~el~t~g~~p~~~~~----  248 (302)
T cd05055         177 GKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPES-IFNCVYTFESDVWS---YGILLWEIFSLGSNPYPGMP----  248 (302)
T ss_pred             CCeEEECCCcccccccCCCceeecCCCCcccccCCHhh-hccCCCCcHhHHHH---HHHHHHHHHhCCCCCcCCCC----
Confidence            45689999999874              2456999998 43455678899999   8888888888 555432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ...........+..  .   ..    +......+.++...|++.+|++||++.++++.|+.
T Consensus       249 --~~~~~~~~~~~~~~--~---~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         249 --VDSKFYKLIKEGYR--M---AQ----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             --chHHHHHHHHcCCc--C---CC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence              00001111111110  0   00    01112357788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.17  E-value=7e-11  Score=88.52  Aligned_cols=114  Identities=13%  Similarity=0.052  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC----------C----CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh--CCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------G----RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR--NFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------g----t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~--~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.          +    +..|++||+. .....+.++|+|+   ||+.+++.+|+  ..+.... .. 
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~DiwS---lG~~l~el~~~~~~~p~~~~-~~-  239 (296)
T cd05095         166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI-LLGKFTTASDVWA---FGVTLWEILTLCKEQPYSQL-SD-  239 (296)
T ss_pred             CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHH-hcCCccchhhhhH---HHHHHHHHHHhCCCCCcccc-Ch-
Confidence            46789999999874          1    3579999973 3445678899999   77778888773  3332211 00 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       ...+......+.... .....+.     +..+...+.++..+|++.+|.+||+|.+|++.|+
T Consensus       240 -~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         240 -EQVIENTGEFFRDQG-RQVYLPK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             -HHHHHHHHHHHhhcc-ccccCCC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence             011111111111110 0111111     1112246778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.17  E-value=5e-12  Score=98.90  Aligned_cols=109  Identities=12%  Similarity=-0.075  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++..+ |+.+.....    
T Consensus       275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lGvil~e~l~~g~~P~~~~~----  346 (401)
T cd05107         275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES-IFNNLYTTLSDVWS---FGILLWEIFTLGGTPYPELP----  346 (401)
T ss_pred             CCEEEEEecCcceecccccccccCCCcCCCCceeChHH-hcCCCCCcHhHHHH---HHHHHHHHHHcCCCCCCCCC----
Confidence            45789999999863              3457999998 33444567899999   7777888887 554432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ...........+..  ..       .+......+.++...|++.+|..||+|.+++..|+.
T Consensus       347 --~~~~~~~~~~~~~~--~~-------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         347 --MNEQFYNAIKRGYR--MA-------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             --chHHHHHHHHcCCC--CC-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence              00111111111110  00       111112356778889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.17  E-value=9.2e-12  Score=95.37  Aligned_cols=109  Identities=15%  Similarity=-0.012  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.++ |..+.....    
T Consensus       215 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~~----  286 (343)
T cd05103         215 NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IFDRVYTIQSDVWS---FGVLLWEIFSLGASPYPGVK----  286 (343)
T ss_pred             CCcEEEEecccccccccCcchhhcCCCCCCcceECcHH-hcCCCCCchhhHHH---HHHHHHHHHHCCCCCCCCcc----
Confidence            56799999998874              2456999998 33455677899999   7777888776 544432110    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ...........+...     ......    ...+.++...|++.+|.+||++.+|++.|+.
T Consensus       287 --~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~  338 (343)
T cd05103         287 --IDEEFCRRLKEGTRM-----RAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  338 (343)
T ss_pred             --ccHHHHHHHhccCCC-----CCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              000011111111110     000101    1246788899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.17  E-value=5.9e-12  Score=95.17  Aligned_cols=108  Identities=16%  Similarity=0.049  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||+ ......+.++|+|+   ||+.+.+..+ |..+....     
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lG~~l~el~~~g~~p~~~~-----  240 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGILMWEIFTLGGSPYPGI-----  240 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHH-HccCCcCccchhhH---HHHHHHHHHhCCCCCCCCC-----
Confidence            56789999999974              2246999998 33455678899999   7777778777 44332110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ...........+...+     .    +......+..+...|++.+|++||++.++++.|+.
T Consensus       241 --~~~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~  292 (314)
T cd05099         241 --PVEELFKLLREGHRMD-----K----PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK  292 (314)
T ss_pred             --CHHHHHHHHHcCCCCC-----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence              0111111222111111     1    11122356678899999999999999999999887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.16  E-value=4.2e-12  Score=93.71  Aligned_cols=108  Identities=14%  Similarity=0.019  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+|++|||++..             ++..|+|||+ ......+.++|+|+   ||+.+++.++ |..+.......   
T Consensus       143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~ell~~g~~p~~~~~~~---  215 (266)
T cd05064         143 DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEA-IQYHHFSSASDVWS---FGIVMWEVMSYGERPYWDMSGQ---  215 (266)
T ss_pred             CCcEEECCCcccccccccchhcccCCCCceeecCHHH-HhhCCccchhHHHH---HHHHHHHHhcCCCCCcCcCCHH---
Confidence            56789999998654             3467999998 44556678899999   7777887665 65554221100   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+    .....++..     ..    .+..+...+.++...|++.+|.+||++.++.+.|+.
T Consensus       216 ~~----~~~~~~~~~-----~~----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         216 DV----IKAVEDGFR-----LP----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             HH----HHHHHCCCC-----CC----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            11    111111110     00    112233457778899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.16  E-value=6.1e-11  Score=91.23  Aligned_cols=115  Identities=17%  Similarity=0.115  Sum_probs=72.3

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCc-ccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGY-SYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~-~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      ++..+||+|||.+-.                ||+.|||||. .....-.++|+|+|+   ||+..+|+++|.-|....  
T Consensus       161 ~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwS---fGITA~ELA~G~aPf~k~--  235 (516)
T KOG0582|consen  161 SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWS---FGITACELAHGHAPFSKY--  235 (516)
T ss_pred             CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhh---hhHHHHHHhcCCCCcccC--
Confidence            467899999987653                8999999999 334445689999999   888999999998775431  


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                           ....+...--++..-..+-..+..+....--..+-++...|++.+|.+|||.++.++
T Consensus       236 -----pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  236 -----PPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             -----ChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                 112222111122211111000101111111225566777899999999999999863

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.16  E-value=7.1e-12  Score=91.75  Aligned_cols=108  Identities=11%  Similarity=-0.012  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         .+..|+|||+ ......+.+.|+|+   ||+.+.+.++ |..+....      ....
T Consensus       136 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~s---lG~~l~el~~~g~~p~~~~------~~~~  205 (254)
T cd05083         136 DGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEA-LKHKKFSSKSDVWS---YGVLLWEVFSYGRAPYPKM------SLKE  205 (254)
T ss_pred             CCcEEECCCccceeccccCCCCCCCceecCHHH-hccCCcCchhhHHH---HHHHHHHHHhCCCCCCccC------CHHH
Confidence            46789999998875         2456999998 44455677899999   7777888777 54443211      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .......+...   ++      .......+..+...|++.+|..||++.+++..|+.
T Consensus       206 -~~~~~~~~~~~---~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         206 -VKECVEKGYRM---EP------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -HHHHHhCCCCC---CC------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence             11122111111   10      11122456688889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.16  E-value=9.8e-12  Score=91.31  Aligned_cols=108  Identities=15%  Similarity=0.023  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|++||+ ......+.++|+|+   ||+.+++.++ |+.+.....   ..
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~~---~~  210 (260)
T cd05067         138 TLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWS---FGILLTEIVTYGRIPYPGMT---NP  210 (260)
T ss_pred             CCCEEEccCcceeecCCCCcccccCCcccccccCHHH-hccCCcCcccchHH---HHHHHHHHHhCCCCCCCCCC---hH
Confidence            45789999998863             3457999998 44555678899999   8888888888 665542111   00


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .++    .....+...     ....    .....+.+++.+|++.+|++||++.++...|+.
T Consensus       211 ~~~----~~~~~~~~~-----~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         211 EVI----QNLERGYRM-----PRPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHH----HHHHcCCCC-----CCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            111    111111100     0111    112357788889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.16  E-value=1.2e-11  Score=90.42  Aligned_cols=107  Identities=17%  Similarity=0.085  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH--hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT--RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t--~~~~~~~~~~~~~~   67 (169)
                      +..+|++||||+|.            ||+.||.||. .......+++|+|+   +|..+.|...  -.|.++        
T Consensus       164 ~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~-i~~~~Y~~kSDiWs---lGCllyEMcaL~~PF~g~--------  231 (375)
T KOG0591|consen  164 NGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPER-IHESGYNFKSDIWS---LGCLLYEMCALQSPFYGD--------  231 (375)
T ss_pred             CCceeeccchhHhHhcchhHHHHhhcCCCcccCHHH-HhcCCCCcchhHHH---HHHHHHHHHhcCCCcccc--------
Confidence            57899999999996            9999999998 55667789999999   6665555443  233221        


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+... .....++..     +.+..   .---..+.+|+-.|+..+|..||+....++.++.
T Consensus       232 n~~~L-~~KI~qgd~-----~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  232 NLLSL-CKKIEQGDY-----PPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             cHHHH-HHHHHcCCC-----CCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            12111 112222211     11111   1222345667788999999999997666655544

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.15  E-value=5.6e-12  Score=94.95  Aligned_cols=108  Identities=17%  Similarity=0.019  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.++ |..+....     
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~~l~el~~~g~~p~~~~-----  246 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWS---FGVLLWEIFTLGGSPYPGV-----  246 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHH-hccCCCCcHHHHHH---HHHHHHHHHcCCCCCCCcC-----
Confidence            56789999999863              2357999998 33445677899999   7777888887 44432110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .. .........+..   .+      .+......+.++...|++.+|.+||+|.+|++.|+.
T Consensus       247 -~~-~~~~~~~~~~~~---~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         247 -PV-EELFKLLKEGHR---MD------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             -CH-HHHHHHHHcCCC---CC------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence             11 111111111110   00      111122356678889999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.15  E-value=2.4e-11  Score=92.65  Aligned_cols=54  Identities=15%  Similarity=0.100  Sum_probs=44.5

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.          |+..|+|||+ ......+.++|+|+   ||+.+++.+||+.+..
T Consensus       140 ~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~tg~~p~~  203 (331)
T cd06649         140 RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER-LQGTHYSVQSDIWS---MGLSLVELAIGRYPIP  203 (331)
T ss_pred             CCcEEEccCcccccccccccccCCCCcCcCCHhH-hcCCCCCchHhHHH---HHHHHHHHHhCCCCCC
Confidence            45789999999864          7889999998 43455678899999   8888999999998763

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.15  E-value=2.4e-11  Score=90.48  Aligned_cols=110  Identities=17%  Similarity=0.089  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccccc--ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNI--LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~--~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.           |+..|+|||.....  ...+.++|+|+   ||+.+.+.++|+.+.....     .
T Consensus       144 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~~-----~  215 (288)
T cd06616         144 NGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWS---LGITLYEVATGKFPYPKWN-----S  215 (288)
T ss_pred             CCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhH---HHHHHHHHHhCCCCchhcc-----h
Confidence            34689999998863           67889999983322  24567899999   8888889999887743210     1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........      .-..+.+...........+.++...|++.+|++||++.+|+.
T Consensus       216 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         216 VFDQLTQVV------KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHHhhhc------CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111111110      001112211111123345678888999999999999999876

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.15  E-value=9.8e-12  Score=92.69  Aligned_cols=117  Identities=10%  Similarity=-0.017  Sum_probs=67.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||. ......+.++|+|+   ||+.+.+..+|..+....   ......
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~~f~~~---~~~~~~  218 (290)
T cd07862         146 SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV-LLQSSYATPVDLWS---VGCIFAEMFRRKPLFRGS---SDVDQL  218 (290)
T ss_pred             CCCEEEccccceEeccCCcccccccccccccChHH-HhCCCCCCccchHH---HHHHHHHHHcCCCCcCCC---CHHHHH
Confidence            56799999999874           6889999998 43445667899999   777788888876543221   111111


Q ss_pred             hhhHHhhh--------CC-Ce-eeecccccccc---ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWC--------EG-NV-QELMDPVLKES---FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~--------~~-~~-~~~~d~~l~~~---~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........        .. .. ...+++.....   .....-..+.++..+|++.+|++||++.++++
T Consensus       219 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         219 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            11111100        00 00 00111110000   00011124557889999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.15  E-value=8.1e-11  Score=86.90  Aligned_cols=112  Identities=13%  Similarity=0.076  Sum_probs=66.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCccccc------ccCCccccCCCCCCcCHHHHHHHH-hCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNI------LRGNKKVESQELPLFPLDLIHEAT-RNFSNEN   60 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~------~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~   60 (169)
                      +.++|++|||+++.              ++..|+|||+..+.      ...+.++|+|+   ||+.+++.++ |..+...
T Consensus       136 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws---lG~~l~el~~~g~~p~~~  212 (269)
T cd05087         136 DLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWS---LGVTIWELFELGSQPYRH  212 (269)
T ss_pred             CCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHH---HHHHHHHHHhCCCCCCCC
Confidence            45789999998863              45679999983211      12367899999   7777888876 6655432


Q ss_pred             CCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           61 KLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        61 ~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ....   ....    ....+....+.++.+.....    ..+..+...|+ .+|++||++.+|++.|+
T Consensus       213 ~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         213 LSDE---QVLT----YTVREQQLKLPKPRLKLPLS----DRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CChH---HHHH----HHhhcccCCCCCCccCCCCC----hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            1111   0111    10111112233333322111    12444666788 57999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.15  E-value=7.4e-11  Score=87.16  Aligned_cols=113  Identities=12%  Similarity=0.027  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc------cccCCccccCCCCCCcCHHHHHHHHhCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN------ILRGNKKVESQELPLFPLDLIHEATRNFSNENK   61 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~   61 (169)
                      +..+||+|||+++.              ++..|+|||+...      ....+.++|+|+   ||+.+++.+++....-..
T Consensus       135 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws---lG~~l~el~~~~~~p~~~  211 (268)
T cd05086         135 DLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWA---LGVTLWELFENAAQPYSH  211 (268)
T ss_pred             CccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHH---HHHHHHHHHhCCCCCCCC
Confidence            46789999998752              4578999998321      112357899999   777777877754432111


Q ss_pred             CCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           62 LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        62 ~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      .     .......... .+....+.++.+...+..    .+.++...|+ .+|++||++.+|++.|.
T Consensus       212 ~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         212 L-----SDREVLNHVI-KDQQVKLFKPQLELPYSE----RWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             C-----CHHHHHHHHH-hhcccccCCCccCCCCcH----HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1     1111111111 222334555555433332    3444566788 56999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.14  E-value=7.9e-12  Score=91.48  Aligned_cols=107  Identities=20%  Similarity=0.144  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++.+|+|||+ ......+.++|+|+   +|+.+.+..+ |..+....      
T Consensus       136 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~-~~~~~~~~~~Dv~s---lG~~l~el~~~g~~p~~~~------  205 (256)
T cd05112         136 NQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEV-FSFSKYSSKSDVWS---FGVLMWEVFSEGKTPYENR------  205 (256)
T ss_pred             CCeEEECCCcceeecccCcccccCCCccchhhcCHhH-hccCCcChHHHHHH---HHHHHHHHHcCCCCCCCcC------
Confidence            45689999998763             2357999998 44455677899999   7777778777 55443211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ....... ....+  .....+.+.       ...+.+++.+|++.+|++||++.+|++.|+
T Consensus       206 ~~~~~~~-~~~~~--~~~~~~~~~-------~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         206 SNSEVVE-TINAG--FRLYKPRLA-------SQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CHHHHHH-HHhCC--CCCCCCCCC-------CHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            1111111 11111  111222221       245788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.14  E-value=1.2e-11  Score=91.20  Aligned_cols=106  Identities=15%  Similarity=-0.018  Sum_probs=67.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|+|||+...    ....+.++|+|+   ||+.+++..+|..+......  
T Consensus       147 ~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~s---lGv~l~el~~g~~p~~~~~~--  221 (272)
T cd06637         147 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS---LGITAIEMAEGAPPLCDMHP--  221 (272)
T ss_pred             CCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHH---HHHHHHHHHhCCCCccccCH--
Confidence            56789999999863            6778999998331    223456899999   88888899998876532110  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         .....  ...........+.        .....+.++..+|++.+|.+||++.+++.
T Consensus       222 ---~~~~~--~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         222 ---MRALF--LIPRNPAPRLKSK--------KWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             ---HHHHH--HHhcCCCCCCCCC--------CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence               00000  0011111111111        11234667888999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.14  E-value=9e-12  Score=99.54  Aligned_cols=104  Identities=16%  Similarity=0.033  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||.+|+|||+ +.....+.++|+|+   ||+.+++.+||..+....      
T Consensus       205 ~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~el~tg~~Pf~~~------  274 (478)
T PTZ00267        205 TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPEL-WERKRYSKKADMWS---LGVILYELLTLHRPFKGP------  274 (478)
T ss_pred             CCcEEEEeCcCceecCCccccccccccCCCccccCHhH-hCCCCCCcHHhHHH---HHHHHHHHHhCCCCCCCC------
Confidence            46789999999873              7889999998 44556678899999   888888999988764321      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......... .+..    ++ .    +......+.++...|++.+|..||++.+++.
T Consensus       275 ~~~~~~~~~~-~~~~----~~-~----~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        275 SQREIMQQVL-YGKY----DP-F----PCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CHHHHHHHHH-hCCC----CC-C----CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            1111111111 1111    11 0    1111134667888999999999999999863

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.14  E-value=8.5e-12  Score=95.14  Aligned_cols=108  Identities=16%  Similarity=-0.009  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++..+ |..+...      
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~------  239 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGVLLWEIFTLGGSPYPG------  239 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHH-hccCCcCchhhhHH---HHHHHHHHHhcCCCCCCC------
Confidence            56789999999874              2346999998 33445567899999   7777888777 4433211      


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+. .....+...+         .+......+..+...|++.+|.+||+|.+++..|+.
T Consensus       240 ~~~~~~~-~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~  292 (334)
T cd05100         240 IPVEELF-KLLKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR  292 (334)
T ss_pred             CCHHHHH-HHHHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence            0111111 1111111101         011122356788899999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.14  E-value=1.5e-11  Score=90.38  Aligned_cols=104  Identities=13%  Similarity=0.018  Sum_probs=67.4

Q ss_pred             ceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHh
Q 041157            5 QKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKL   76 (169)
Q Consensus         5 ~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~   76 (169)
                      .|++|||++..        ++..|+|||+..+....+.++|+|+   ||+.+.+..+|.........     ..... ..
T Consensus       147 ~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~~l~~l~~g~~~~~~~~~-----~~~~~-~~  217 (258)
T cd05078         147 IKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWS---FGTTLWEIFSGGDKPLSALD-----SQKKL-QF  217 (258)
T ss_pred             EEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHH---HHHHHHHHHcCCCCChhhcc-----HHHHH-HH
Confidence            69999998864        6789999998443345678899999   78888888888543211110     00000 01


Q ss_pred             hhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           77 WCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        77 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ... .      ..+..    .....+.++...|++.+|++||++.++++.|.
T Consensus       218 ~~~-~------~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         218 YED-R------HQLPA----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHc-c------ccCCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            110 0      01111    11134677888999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.14  E-value=2.6e-11  Score=89.15  Aligned_cols=111  Identities=14%  Similarity=-0.037  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+ ......+.++|+|+   ||+.+++..+|+.+....    ...+
T Consensus       142 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~----~~~~  213 (267)
T cd08224         142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER-IHENGYNFKSDIWS---LGCLLYEMAALQSPFYGD----KMNL  213 (267)
T ss_pred             CCcEEEeccceeeeccCCCcccceecCCccccCHHH-hccCCCCchhcHHH---HHHHHHHHHHCCCCcccC----CccH
Confidence            45789999998763            6778999998 43445567899999   788888888887764211    1111


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..... ....+.    ..+ +.   .......+.++...|++.+|++||++.+|+++|+.
T Consensus       214 ~~~~~-~~~~~~----~~~-~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~  264 (267)
T cd08224         214 YSLCK-KIEKCD----YPP-LP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE  264 (267)
T ss_pred             HHHHh-hhhcCC----CCC-CC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence            11111 111111    111 10   01222356678889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.13  E-value=1.4e-11  Score=91.95  Aligned_cols=107  Identities=7%  Similarity=-0.082  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+.+|+|||+ +.....+.++|+|+   ||+.+++.++|+.+.......   ...
T Consensus       138 ~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Dvws---lGvil~el~~g~~pf~~~~~~---~~~  210 (285)
T cd05631         138 RGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEV-INNEKYTFSPDWWG---LGCLIYEMIQGQSPFRKRKER---VKR  210 (285)
T ss_pred             CCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhh-hcCCCCCcccCchh---HHHHHHHHHhCCCCCCCCCcc---hhH
Confidence            56789999999863           7889999998 44556678899999   888889999998775432111   001


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      ..........        ..  .+.......+..+...|++.+|.+||+     +.++.+
T Consensus       211 ~~~~~~~~~~--------~~--~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         211 EEVDRRVKED--------QE--EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHHhhcc--------cc--cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            1111111000        00  011111234567888999999999997     677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.13  E-value=7.6e-12  Score=93.39  Aligned_cols=108  Identities=13%  Similarity=-0.004  Sum_probs=69.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~   66 (169)
                      +..+|++|||+++.              ++..|++||+ ......+.++|+|+   ||+.+++..++ ..+....     
T Consensus       155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dvws---lG~~l~el~~~~~~p~~~~-----  225 (288)
T cd05061         155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES-LKDGVFTTSSDMWS---FGVVLWEITSLAEQPYQGL-----  225 (288)
T ss_pred             CCcEEECcCCccccccccccccccCCCcccccccCHHH-hccCCCChHhHHHH---HHHHHHHHHhCCCCCCCCC-----
Confidence            56789999999873              2457999998 43455678899999   77778887773 3332110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .... .......+...     ..    +......+.+++.+|++.+|.+||+|.++++.|+.
T Consensus       226 -~~~~-~~~~~~~~~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  277 (288)
T cd05061         226 -SNEQ-VLKFVMDGGYL-----DQ----PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD  277 (288)
T ss_pred             -CHHH-HHHHHHcCCCC-----CC----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence             0000 11111111100     00    11122467788899999999999999999999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.13  E-value=3.5e-11  Score=89.24  Aligned_cols=104  Identities=15%  Similarity=0.086  Sum_probs=69.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+ ......+.++|+|+   ||+.+.+.+||..+.......   ..
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~-~~~~~~~~~~Dv~s---lG~il~el~tg~~p~~~~~~~---~~  209 (277)
T cd06640         137 QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV-IQQSAYDSKADIWS---LGITAIELAKGEPPNSDMHPM---RV  209 (277)
T ss_pred             CCCEEEcccccceeccCCccccccccCcccccCHhH-hccCCCccHHHHHH---HHHHHHHHHHCCCCCCCcChH---hH
Confidence            45689999998854            5678999998 43455678899999   888888889998764321110   00


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..             .+...............+.++...|++.+|.+||++.+++.
T Consensus       210 ~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         210 LF-------------LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             hh-------------hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence            00             00000011112233456778889999999999999999965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.13  E-value=2e-11  Score=96.66  Aligned_cols=117  Identities=9%  Similarity=-0.023  Sum_probs=69.5

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.+||..+....   .......
T Consensus       208 ~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS---lGvil~elltG~~pf~~~---~~~~~~~  281 (440)
T PTZ00036        208 HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWS---LGCIIAEMILGYPIFSGQ---SSVDQLV  281 (440)
T ss_pred             CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCC---ChHHHHH
Confidence            4689999999974           6788999998444445678899999   888888889987554221   1101111


Q ss_pred             hhHHhhhC----------CCeeeeccc-----cccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCE----------GNVQELMDP-----VLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~----------~~~~~~~d~-----~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....+..          ....++--+     .+...++......+..+...|++.+|.+||+..++++
T Consensus       282 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        282 RIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            11111000          000000000     0100011111235678888999999999999999874

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.12  E-value=2.4e-11  Score=89.60  Aligned_cols=104  Identities=13%  Similarity=0.078  Sum_probs=64.7

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++.+|+|||+ ......+.++|+|+   ||+.+++.++|..+....     
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~i~~el~~g~~pf~~~-----  212 (266)
T cd06651         142 AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV-ISGEGYGRKADVWS---LGCTVVEMLTEKPPWAEY-----  212 (266)
T ss_pred             CCCEEEccCCCccccccccccCCccccCCccccccCHHH-hCCCCCCchhhhHH---HHHHHHHHHHCCCCcccc-----
Confidence            56789999998762               5678999998 43455678899999   888888999987764321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ...........     ....+.+..     .+...++..+.|+..+|++||+|.+|+.
T Consensus       213 -~~~~~~~~~~~-----~~~~~~~~~-----~~~~~~~~li~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         213 -EAMAAIFKIAT-----QPTNPQLPS-----HISEHARDFLGCIFVEARHRPSAEELLR  260 (266)
T ss_pred             -chHHHHHHHhc-----CCCCCCCch-----hcCHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             01111111100     111122211     1112223334688899999999999964

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.12  E-value=3.6e-11  Score=89.53  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=72.6

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC-----
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG-----   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~-----   66 (169)
                      +..+||+|||+++.          |+..|++||+ ......+.++|+|+   ||+.+++.+||..+.........     
T Consensus       140 ~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~tg~~p~~~~~~~~~~~~~~  215 (284)
T cd06620         140 RGQIKLCDFGVSGELINSIADTFVGTSTYMSPER-IQGGKYTVKSDVWS---LGISIIELALGKFPFAFSNIDDDGQDDP  215 (284)
T ss_pred             CCcEEEccCCcccchhhhccCccccCcccCCHHH-HccCCCCccchHHH---HHHHHHHHHhCCCCCcccchhhhhhhhh
Confidence            45789999998763          6889999998 43446677899999   88888899999887653322110     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ..+..+.......      -.+.+..   ......+..+..+|++.+|++||++.+|++..
T Consensus       216 ~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         216 MGILDLLQQIVQE------PPPRLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             hHHHHHHHHHhhc------cCCCCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            0111111111100      0111111   11223566788899999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.12  E-value=1.2e-11  Score=92.13  Aligned_cols=108  Identities=17%  Similarity=0.031  Sum_probs=68.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              .+..|+|||+ ......+.++|+|+   ||+.+++..+ +..+...   .  
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~~~~~~p~~~---~--  236 (288)
T cd05050         166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPES-IFYNRYTTESDVWA---YGVVLWEIFSYGMQPYYG---M--  236 (288)
T ss_pred             CCceEECccccceecccCccccccCCCccChhhcCHHH-HhcCCCCchhHHHH---HHHHHHHHHhCCCCCCCC---C--
Confidence            46789999998863              2346999998 43455678899999   7777777776 3322211   0  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ...... .....+....         .+......+.++..+|++.+|.+||++.|+++.|+.
T Consensus       237 -~~~~~~-~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         237 -AHEEVI-YYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             -CHHHHH-HHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence             111111 1111221110         011122457789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.12  E-value=1.9e-11  Score=103.05  Aligned_cols=102  Identities=17%  Similarity=0.089  Sum_probs=63.0

Q ss_pred             cccceeeeeEeecC----------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH
Q 041157            2 NAKQKVLQFLRSGE----------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT   53 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t   53 (169)
                      +..+||+|||+++.                            ||..|||||+.. ....+.++|+|+   ||+.++|+++
T Consensus       135 ~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDVwS---lGviL~ELl~  210 (793)
T PLN00181        135 DATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN-GSSSNCASDVYR---LGVLLFELFC  210 (793)
T ss_pred             cCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc-cCCCCchhhhhh---HHHHHHHHhh
Confidence            35689999999862                            466699999833 445578999999   7777777777


Q ss_pred             hCCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           54 RNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        54 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +..+...        ... ....+..    ..+.+..     .........+..+|++.+|.+||+|.+|++
T Consensus       211 ~~~~~~~--------~~~-~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        211 PVSSREE--------KSR-TMSSLRH----RVLPPQI-----LLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             CCCchhh--------HHH-HHHHHHH----hhcChhh-----hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            5543211        000 0001100    0111111     111223456677899999999999999975

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.12  E-value=4.3e-11  Score=92.01  Aligned_cols=108  Identities=11%  Similarity=-0.016  Sum_probs=67.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            ||..|+|||+...    ......++|+|+   ||+.+++.++|+.+....  . 
T Consensus       204 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvws---lGvil~el~~g~~pf~~~--~-  277 (353)
T PLN00034        204 AKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWS---LGVSILEFYLGRFPFGVG--R-  277 (353)
T ss_pred             CCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHH---HHHHHHHHHhCCCCCCCC--C-
Confidence            56789999998863            7889999998321    122345899999   888888999998775411  1 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ...|........ ..  ..+....    ..-..+.++...|++.+|.+||++.|+++
T Consensus       278 ---~~~~~~~~~~~~-~~--~~~~~~~----~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        278 ---QGDWASLMCAIC-MS--QPPEAPA----TASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             ---CccHHHHHHHHh-cc--CCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               011111110000 00  0001111    11234667788999999999999999986

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.12  E-value=4.7e-11  Score=90.11  Aligned_cols=54  Identities=6%  Similarity=-0.197  Sum_probs=43.1

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +.++||+|||+++.               ||..|+|||...+....+.++|+|+   ||+.+++.+||..+.
T Consensus       148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS---lG~il~el~tg~~~f  216 (317)
T cd07867         148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA---IGCIFAELLTSEPIF  216 (317)
T ss_pred             CCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHh---HHHHHHHHHhCCCCc
Confidence            35789999999874               5778999998444445678899999   888889999997654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.12  E-value=2.1e-11  Score=88.98  Aligned_cols=107  Identities=17%  Similarity=0.055  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||. +.....+.++|+|+   ||+.+++..| +..+.... ..  
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~i~~~l~t~~~~p~~~~-~~--  201 (251)
T cd05041         129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEA-LNYGRYTSESDVWS---YGILLWETFSLGDTPYPGM-SN--  201 (251)
T ss_pred             CCcEEEeeccccccccCCcceeccccCcceeccCChHh-hccCCCCcchhHHH---HHHHHHHHHhccCCCCccC-CH--
Confidence            45689999998874              1345999998 44456678899999   8888888888 44332111 00  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                         .. .......+.  ...       .+......+.++...|++.+|.+||++.++++.|+
T Consensus       202 ---~~-~~~~~~~~~--~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         202 ---QQ-TRERIESGY--RMP-------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             ---HH-HHHHHhcCC--CCC-------CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence               00 011111110  000       11112235777888999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.11  E-value=2.5e-11  Score=88.83  Aligned_cols=104  Identities=12%  Similarity=-0.007  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            ++..|++||. ......+.++|+|+   ||+.+++..+|..+.....      .
T Consensus       146 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~------~  215 (265)
T cd08217         146 NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ-LNHMSYDEKSDIWS---LGCLIYELCALSPPFTARN------Q  215 (265)
T ss_pred             CCCEEEecccccccccCCcccccccccCCCccChhh-hcCCCCCchhHHHH---HHHHHHHHHHCCCcccCcC------H
Confidence            46789999998874            6788999998 44455678899999   8878888889887653211      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      -. .......+..     +.+    +......+..+...|++.+|++||+|.+|++
T Consensus       216 ~~-~~~~~~~~~~-----~~~----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         216 LQ-LASKIKEGKF-----RRI----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HH-HHHHHhcCCC-----CCC----ccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            00 1111111111     111    1122345678888999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.11  E-value=1.7e-11  Score=89.70  Aligned_cols=108  Identities=16%  Similarity=-0.013  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         .+.+|++||+ ......+.++|+|+   ||+.+++..+ |..+....      . ..
T Consensus       138 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~------~-~~  206 (256)
T cd05039         138 DLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEA-LREKKFSTKSDVWS---FGILLWEIYSFGRVPYPRI------P-LK  206 (256)
T ss_pred             CCCEEEcccccccccccccccCCCcccccCchh-hcCCcCCcHHHHHH---HHHHHHHHHhcCCCCCCCC------C-HH
Confidence            56789999998885         3567999998 43455667899999   7777877776 55443211      0 11


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ........+..     ...    +......+.++...|++.+|.+||++.++..+|+.
T Consensus       207 ~~~~~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         207 DVVPHVEKGYR-----MEA----PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHhcCCC-----CCC----ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            11111111110     000    11122456778889999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=3.6e-11  Score=88.97  Aligned_cols=105  Identities=17%  Similarity=0.164  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|++||+ ......+.++|+|+   ||+.+++..||..+.....      .
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~sDv~s---lG~il~~l~tg~~p~~~~~------~  203 (274)
T cd06609         134 EGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEV-IKQSGYDEKADIWS---LGITAIELAKGEPPLSDLH------P  203 (274)
T ss_pred             CCCEEEcccccceeecccccccccccCCccccChhh-hccCCCCchhhHHH---HHHHHHHHHhCCCCcccCc------h
Confidence            46789999998864            5667999998 44455788999999   8888888899877643211      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..... ....+     ..+.+...   .....+..+...|++.+|++||++.+++.
T Consensus       204 ~~~~~-~~~~~-----~~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         204 MRVLF-LIPKN-----NPPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHH-Hhhhc-----CCCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11111 11111     11111111   01224567788999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.11  E-value=2.8e-11  Score=88.90  Aligned_cols=108  Identities=15%  Similarity=0.049  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|++||+ ......+.++|+|+   ||+.+++.+| |..+....   ...
T Consensus       138 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~~l~~l~t~g~~p~~~~---~~~  210 (260)
T cd05073         138 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA-INFGSFTIKSDVWS---FGILLMEIVTYGRIPYPGM---SNP  210 (260)
T ss_pred             CCcEEECCCcceeeccCCCcccccCCcccccccCHhH-hccCCcCccccchH---HHHHHHHHHhcCCCCCCCC---CHH
Confidence            45789999998763             2356999998 44455677899999   7777888888 66543211   000


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+..    ....+.....     ..    .....+..+..+|++.+|++||++.++.+.|+.
T Consensus       211 ~~~~----~~~~~~~~~~-----~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         211 EVIR----ALERGYRMPR-----PE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHH----HHhCCCCCCC-----cc----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1111    1111111110     01    112346678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.10  E-value=8.7e-11  Score=90.53  Aligned_cols=52  Identities=8%  Similarity=-0.093  Sum_probs=40.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.           ||..|+|||+ ......+.++|+|+   ||+.+++.+++..+
T Consensus       193 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvvl~ell~~~~~  255 (357)
T PHA03209        193 VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEV-LARDKYNSKADIWS---AGIVLFEMLAYPST  255 (357)
T ss_pred             CCCEEEecCccccccccCcccccccccccccCCee-cCCCCCCchhhHHH---HHHHHHHHHHcCCc
Confidence            45789999999873           7889999998 43445678899999   77777777775544

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.10  E-value=1.9e-11  Score=90.25  Aligned_cols=108  Identities=14%  Similarity=0.027  Sum_probs=68.2

Q ss_pred             cccceeeeeEeecC--------------C---CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------G---RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------g---t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~   63 (169)
                      +..+|++|||+++.              +   +..|++||+ +.....+.++|+|+   ||+.+.+..+ |..+....  
T Consensus       142 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dvws---lG~~l~e~l~~g~~p~~~~--  215 (269)
T cd05065         142 NLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA-IAYRKFTSASDVWS---YGIVMWEVMSYGERPYWDM--  215 (269)
T ss_pred             CCcEEECCCccccccccCccccccccccCCCcceeecCHhH-hccCcccchhhhhh---hHHHHHHHhcCCCCCCCCC--
Confidence            46789999998764              0   236999998 44555677899999   7777777665 55543211  


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .......+.    ....       .+.  .+......+.++...|++.+|.+||+|.+|+..|+.
T Consensus       216 -~~~~~~~~i----~~~~-------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         216 -SNQDVINAI----EQDY-------RLP--PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             -CHHHHHHHH----HcCC-------cCC--CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence             000111111    1100       000  011122346778889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=2.1e-11  Score=92.22  Aligned_cols=106  Identities=10%  Similarity=-0.067  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+.+.+||..+....      ..
T Consensus       129 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lGvil~el~tg~~pf~~~------~~  198 (312)
T cd05585         129 QGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPEL-LLGHGYTKAVDWWT---LGVLLYEMLTGLPPFYDE------NV  198 (312)
T ss_pred             CCcEEEEECcccccCccCCCccccccCCcccCCHHH-HcCCCCCCccceec---hhHHHHHHHhCCCCcCCC------CH
Confidence            56799999999874            7889999998 44455678899999   777888889998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ........ .+.      ..+....+    ..+.++...|++.+|.+||+...+.+.|.
T Consensus       199 ~~~~~~~~-~~~------~~~~~~~~----~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         199 NEMYRKIL-QEP------LRFPDGFD----RDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHHHH-cCC------CCCCCcCC----HHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            11111111 111      01111111    23556778999999999987655544443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.10  E-value=1.9e-11  Score=89.26  Aligned_cols=107  Identities=20%  Similarity=0.012  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~   66 (169)
                      +..+||+|||.++.              ++..|+|||. ......+.++|+|+   +|+.+.+.+++ ..+....     
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~-----  211 (262)
T cd00192         141 DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES-LKDGIFTSKSDVWS---FGVLLWEIFTLGATPYPGL-----  211 (262)
T ss_pred             CCcEEEcccccccccccccccccccCCCcCccccCHHH-hccCCcchhhccHH---HHHHHHHHHhcCCCCCCCC-----
Confidence            46789999998874              4668999998 43446678899999   77778888884 4443221     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       ... ........+..  .   .    .+......+..+...|++.+|.+||++.+++..|+
T Consensus       212 -~~~-~~~~~~~~~~~--~---~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         212 -SNE-EVLEYLRKGYR--L---P----KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             -CHH-HHHHHHHcCCC--C---C----CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence             001 11111111110  0   0    11111245678888999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.10  E-value=1.9e-11  Score=90.19  Aligned_cols=108  Identities=15%  Similarity=0.064  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+|++|||+++.               ++..|++||+ ......+.++|+|+   ||+.+++.++ |..+......  
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~s---lG~~l~ell~~g~~p~~~~~~--  215 (267)
T cd05066         142 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA-IAYRKFTSASDVWS---YGIVMWEVMSYGERPYWEMSN--  215 (267)
T ss_pred             CCeEEeCCCCcccccccccceeeecCCCccceeecCHhH-hccCccCchhhhHH---HHHHHHHHhcCCCCCcccCCH--
Confidence            46789999998874               1346999998 43455678899999   7777777665 6655322110  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .....    ...++.  . . +.     .......+..+...|++.+|.+||+|.++++.|+.
T Consensus       216 -~~~~~----~~~~~~--~-~-~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         216 -QDVIK----AIEEGY--R-L-PA-----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             -HHHHH----HHhCCC--c-C-CC-----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence             01111    111110  0 0 00     11122356788889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.09  E-value=3.4e-11  Score=88.13  Aligned_cols=104  Identities=15%  Similarity=0.071  Sum_probs=68.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            |+..|+|||+ ......+.++|+|+   ||+.+.+.+||+.+....      ..
T Consensus       137 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~s---lG~i~~~l~~g~~~~~~~------~~  206 (256)
T cd08218         137 DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEI-CENRPYNNKSDIWA---LGCVLYEMCTLKHAFEAG------NM  206 (256)
T ss_pred             CCCEEEeeccceeecCcchhhhhhccCCccccCHHH-hCCCCCCCccchhH---HHHHHHHHHcCCCCccCC------CH
Confidence            45789999998864            6778999998 44556677899999   777788888887654321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...+.... .+..     +..    +......+..+...|++.+|++||+|.+|++
T Consensus       207 ~~~~~~~~-~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         207 KNLVLKII-RGSY-----PPV----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHHh-cCCC-----CCC----cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11111111 1110     001    1112234677888999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.09  E-value=5.7e-11  Score=88.29  Aligned_cols=118  Identities=11%  Similarity=0.019  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             ++..|+|||+.......+.++|+|+   ||+.+++..+|..+....   ....
T Consensus       136 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~s---lG~~l~~l~~g~~~~~~~---~~~~  209 (288)
T cd07833         136 SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWA---IGCIMAELLDGEPLFPGD---SDID  209 (288)
T ss_pred             CCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHH---HHHHHHHHHhCCCCCCCC---CHHH
Confidence            57899999998775             3567999999443326678999999   787888888887543211   0000


Q ss_pred             hhhhhHHhh-----------h-CCC-----eeeeccccc-cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLW-----------C-EGN-----VQELMDPVL-KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~-----------~-~~~-----~~~~~d~~l-~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+           . ...     ..+..++.. ...++......+..+...|++.+|++||++.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            000000000           0 000     000111100 00011112356788899999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.08  E-value=5.6e-11  Score=86.83  Aligned_cols=106  Identities=15%  Similarity=0.066  Sum_probs=68.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            ++..|++||+ ......+.++|+|+   ||+.+++.+||+.+........    
T Consensus       135 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---~G~il~~l~~g~~p~~~~~~~~----  206 (256)
T cd06612         135 EGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV-IQEIGYNNKADIWS---LGITAIEMAEGKPPYSDIHPMR----  206 (256)
T ss_pred             CCcEEEcccccchhcccCccccccccCCccccCHHH-HhcCCCCchhhHHH---HHHHHHHHHhCCCCCCCcchhh----
Confidence            45789999998774            5678999998 44456678899999   7777888889877643211100    


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ......     ....+.+.  .+...-..+.++...|++.+|++||++.+|++
T Consensus       207 ---~~~~~~-----~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         207 ---AIFMIP-----NKPPPTLS--DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             ---hhhhhc-----cCCCCCCC--chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence               000000     00011111  01111234667788999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.08  E-value=4.3e-11  Score=88.74  Aligned_cols=118  Identities=12%  Similarity=-0.037  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +.++||+|||+++.             ++..|+|||...+....+.++|+|+   ||+.+.+..||..+......   ..
T Consensus       136 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s---lG~~l~el~t~~~p~~~~~~---~~  209 (287)
T cd07840         136 DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWS---VGCILAELFLGKPIFQGSTE---LE  209 (287)
T ss_pred             CCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHH---HHHHHHHHHhCCCCCCCCCh---HH
Confidence            57899999998875             3567999997444445578899999   88888888888755432111   01


Q ss_pred             hhhhhHHhhhC------CCeee-----------eccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCE------GNVQE-----------LMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~------~~~~~-----------~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........      ....+           .....+.......+...+.++...|++.+|.+||++.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         210 QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11111110000      00000           00011110000112356788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.08  E-value=1.5e-10  Score=88.19  Aligned_cols=104  Identities=9%  Similarity=-0.039  Sum_probs=65.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC--Cc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG--GF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~--~~   67 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   ||+.+++.++|..+........  ..
T Consensus       132 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~Pf~~~~~~~~~~~  207 (329)
T cd05618         132 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRGEDYGFSVDWWA---LGVLMFEMMAGRSPFDIVGSSDNPDQ  207 (329)
T ss_pred             CCCEEEeeCCccccccCCCCccccccCCccccCHHH-HcCCCCCCccceec---ccHHHHHHhhCCCCCccCCCcCCccc
Confidence            56799999998863            7889999998 43445567899999   8888889999988754211111  01


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT  119 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~  119 (169)
                      ....+.......+..      .+    +......+..+...|++.+|.+||+
T Consensus       208 ~~~~~~~~~i~~~~~------~~----p~~~~~~~~~ll~~~L~~dP~~R~~  249 (329)
T cd05618         208 NTEDYLFQVILEKQI------RI----PRSLSVKAASVLKSFLNKDPKERLG  249 (329)
T ss_pred             ccHHHHHHHHhcCCC------CC----CCCCCHHHHHHHHHHhcCCHHHcCC
Confidence            112222222111110      11    1111234567888999999999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=1.3e-10  Score=88.63  Aligned_cols=112  Identities=9%  Similarity=-0.072  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||+ ......+.++|+|+   +|+.+++.++|..+....-      ... 
T Consensus       137 ~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~ell~g~~pf~~~~------~~~-  205 (333)
T cd05600         137 SGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEV-LRGKGYDFTVDYWS---LGCMLYEFLCGFPPFSGST------PNE-  205 (333)
T ss_pred             CCCEEEEeCcCCcccccccCCcccCccccChhH-hcCCCCCCccceec---chHHHhhhhhCCCCCCCCC------HHH-
Confidence            46799999999874         7899999998 43446678899999   7777888888887653211      111 


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ........  ...+...............+..+...|++.+|.+||++.+++..
T Consensus       206 ~~~~i~~~--~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         206 TWENLKYW--KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHHhc--cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            11111100  01111100000001112345567778999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=5.3e-11  Score=87.36  Aligned_cols=105  Identities=11%  Similarity=0.009  Sum_probs=67.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.               |+..|+|||+ ......+.++|+|+   +|+.+.+.++|+.+....   . 
T Consensus       140 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~---~-  211 (263)
T cd06625         140 AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV-ISGEGYGRKADVWS---VGCTVVEMLTEKPPWAEF---E-  211 (263)
T ss_pred             CCCEEEeecccceeccccccccccccCCCcCccccCcce-eccCCCCchhhhHH---HHHHHHHHHhCCCCcccc---c-
Confidence            56799999998863               4568999998 44455778899999   888888999988764321   0 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        .............     .+.+.    ...-..+..+...|++.+|.+||++.+++.
T Consensus       212 --~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         212 --AMAAIFKIATQPT-----NPQLP----SHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             --hHHHHHHHhccCC-----CCCCC----ccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence              1110111111000     11111    111234566778999999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.07  E-value=1.6e-10  Score=84.52  Aligned_cols=104  Identities=13%  Similarity=0.029  Sum_probs=67.4

Q ss_pred             cceeeeeEeecC--------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCCcchhhhh
Q 041157            4 KQKVLQFLRSGE--------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGGFGPVYKT   73 (169)
Q Consensus         4 ~~Ki~dFgls~~--------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~~~lv~~~   73 (169)
                      .+||+|||+++.        ++..|+|||+.... ...+.++|+|+   ||+.+++.+++ ..+... ...     ..+.
T Consensus       146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s---lG~~~~~l~~~~~~p~~~-~~~-----~~~~  216 (259)
T cd05037         146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWS---FGTTLLEICSNGEEPLST-LSS-----SEKE  216 (259)
T ss_pred             eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHH---HHHHHHHHHhCCCCCccc-CCc-----hhHH
Confidence            589999999886        67889999983322 25678899999   77778888885 332221 111     0000


Q ss_pred             HHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        74 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       ..+....       .+... .   ...+.++...|+..+|.+||++.+|++.|.
T Consensus       217 -~~~~~~~-------~~~~~-~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         217 -RFYQDQH-------RLPMP-D---CAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             -HHHhcCC-------CCCCC-C---chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             0111100       00000 0   146678889999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.07  E-value=1.2e-10  Score=87.81  Aligned_cols=53  Identities=15%  Similarity=0.110  Sum_probs=43.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.          |+..|+|||+ ......+.++|+|+   ||+.+++.+||+.+.
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~~Diws---lG~~l~~l~~g~~p~  198 (308)
T cd06615         136 RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER-LQGTHYTVQSDIWS---LGLSLVEMAIGRYPI  198 (308)
T ss_pred             CCcEEEccCCCcccccccccccCCCCcCccChhH-hcCCCCCccchHHH---HHHHHHHHHhCCCCC
Confidence            45789999998874          6789999998 43445667899999   888899999998765

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.07  E-value=1e-10  Score=88.14  Aligned_cols=107  Identities=17%  Similarity=0.117  Sum_probs=68.8

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.        ++..|+|||+..  .....+.++|+|+   ||+.+++.+||..+....   .......
T Consensus       151 ~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s---~G~il~el~tg~~p~~~~---~~~~~~~  224 (307)
T cd06607         151 PGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNM---NAMSALY  224 (307)
T ss_pred             CCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHH---HHHHHHHHHcCCCCCCCc---cHHHHHH
Confidence            56789999999875        677899999843  2344567899999   777888888988664221   0000111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      .    .....     .+.+.   .......+..+...|++.+|++||+|.+|+..
T Consensus       225 ~----~~~~~-----~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         225 H----IAQND-----SPTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             H----HhcCC-----CCCCC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0    00000     01111   11122346777889999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.07  E-value=4.9e-11  Score=87.26  Aligned_cols=104  Identities=13%  Similarity=0.071  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +...||+|||+++.            ++..|+|||+ ......+.++|+|+   +|+.+++.++|+.+...   .   ..
T Consensus       138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~~~~~---~---~~  207 (257)
T cd08223         138 TNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPEL-FSNKPYNYKSDVWA---LGCCVYEMATLKHAFNA---K---DM  207 (257)
T ss_pred             CCcEEEecccceEEecccCCccccccCCcCccChhH-hcCCCCCchhhhHH---HHHHHHHHHcCCCCCCC---C---CH
Confidence            45789999998863            6789999998 44555667899999   88888888888754321   0   11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........ .+..     +.+.    ......+.++...|++.+|.+||++.++++
T Consensus       208 ~~~~~~~~-~~~~-----~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         208 NSLVYRII-EGKL-----PPMP----KDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHH-hcCC-----CCCc----cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11111111 1111     1111    112235678899999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.07  E-value=7.2e-11  Score=88.59  Aligned_cols=106  Identities=12%  Similarity=-0.018  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ +.....+.++|+|+   ||+.+++.++|..+.......     
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---~Gvil~~l~~g~~pf~~~~~~-----  222 (296)
T cd06654         152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMIEGEPPYLNENPL-----  222 (296)
T ss_pred             CCCEEECccccchhccccccccCcccCCccccCHHH-HcCCCCCccchHHH---HHHHHHHHHhCCCCCCCCCHH-----
Confidence            56789999998763            6778999998 44455568899999   888888889988765321110     


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .+.......+      .+.+.  .+......+..+..+|+..+|.+||++.+++.
T Consensus       223 -~~~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         223 -RALYLIATNG------TPELQ--NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             -HhHHHHhcCC------CCCCC--CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence             0110011000      00110  01112234567788999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.07  E-value=1.1e-10  Score=86.11  Aligned_cols=107  Identities=11%  Similarity=0.020  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||++..            |+..|+|||+.... ...+.++|+|+   ||+.+++.++|..+.......   .
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~s---lGvvl~~l~~g~~p~~~~~~~---~  218 (268)
T cd06624         145 SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWS---LGCTIVEMATGKPPFIELGEP---Q  218 (268)
T ss_pred             CCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHH---HHHHHHHHHhCCCCCccccCh---h
Confidence            35789999998753            67899999983222 23567899999   888888888887664221000   0


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...+.....       -..+.+    +......+..+..+|++.+|.+||++.+++.
T Consensus       219 ~~~~~~~~~-------~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         219 AAMFKVGMF-------KIHPEI----PESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhHhhhhhh-------ccCCCC----CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            000100000       011111    1122234667788999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.06  E-value=1.8e-10  Score=87.03  Aligned_cols=53  Identities=6%  Similarity=-0.202  Sum_probs=42.5

Q ss_pred             ccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            3 AKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ..+||+|||+++.               ||..|+|||+..+....+.++|+|+   +|+.+.+.++|+.+.
T Consensus       149 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~~f  216 (317)
T cd07868         149 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA---IGCIFAELLTSEPIF  216 (317)
T ss_pred             CcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHH---HHHHHHHHHhCCCCc
Confidence            5789999999863               5788999998444445678899999   888888999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.06  E-value=2.4e-10  Score=87.30  Aligned_cols=54  Identities=15%  Similarity=0.105  Sum_probs=43.7

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.          |+..|+|||+ ......+.++|+|+   ||+.+++.++|+.+..
T Consensus       140 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~il~~l~~g~~p~~  203 (333)
T cd06650         140 RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER-LQGTHYSVQSDIWS---MGLSLVEMAIGRYPIP  203 (333)
T ss_pred             CCCEEEeeCCcchhhhhhccccCCCCccccCHHH-hcCCCCCcHHHHHH---HHHHHHHHHHCCCCCC
Confidence            45689999999874          7889999998 43445677899999   8888889999987753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.06  E-value=2.4e-10  Score=89.23  Aligned_cols=52  Identities=13%  Similarity=-0.069  Sum_probs=42.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.             ||..|+|||+ ......+.++|+|+   +|+.+++.+||..+
T Consensus       218 ~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~elltg~~p  282 (391)
T PHA03212        218 PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPEL-LARDPYGPAVDIWS---AGIVLFEMATCHDS  282 (391)
T ss_pred             CCCEEEEeCCcccccccccccccccccCccCCCChhh-hcCCCCCcHHHHHH---HHHHHHHHHHCCCC
Confidence            45789999999863             7899999998 43455678899999   88888899998754

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.06  E-value=1.1e-10  Score=86.77  Aligned_cols=118  Identities=14%  Similarity=0.087  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+.+.++|..+...   ......
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~~l~el~~g~~~~~~---~~~~~~  209 (286)
T cd07846         136 SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWA---VGCLVTEMLTGEPLFPG---DSDIDQ  209 (286)
T ss_pred             CCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHH---HHHHHHHHHcCCCCCCC---CchHHH
Confidence            56789999999874            5678999998443344567899999   88888888888643321   110000


Q ss_pred             hhhhHHh-----------hhCCCe-eeeccccccccc-----cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKL-----------WCEGNV-QELMDPVLKESF-----ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~-----------~~~~~~-~~~~d~~l~~~~-----~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......           +..... ..+..+......     .......+..+...|++.+|++||+|.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         210 LYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            0000000           000000 000011110000     0112345778999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.06  E-value=1.3e-10  Score=89.42  Aligned_cols=53  Identities=8%  Similarity=-0.120  Sum_probs=43.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.           ||..|+|||. +.....+.++|+|+   ||+.+.+.++|+.+.
T Consensus       155 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~pf  218 (355)
T cd07874         155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDIWS---VGCIMGEMVRHKILF  218 (355)
T ss_pred             CCCEEEeeCcccccCCCccccCCccccCCccCHHH-HcCCCCCchhhHHH---HHHHHHHHHhCCCCC
Confidence            56799999999874           6789999998 43445677899999   888888888987654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.05  E-value=2.3e-10  Score=87.17  Aligned_cols=105  Identities=10%  Similarity=0.007  Sum_probs=67.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+.+.+||..+............
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~ell~g~~pf~~~~~~~~~~~  207 (327)
T cd05617         132 DGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEI-LRGEEYGFSVDWWA---LGVLMFEMMAGRSPFDIITDNPDMNT  207 (327)
T ss_pred             CCCEEEeccccceeccCCCCceecccCCcccCCHHH-HCCCCCCchheeeh---hHHHHHHHHhCCCCCCccCCCccccc
Confidence            56789999998863            7889999998 44455678899999   77788889999887643222222122


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ..+..........      .+....+    ..+..+...|++.+|.+|++.
T Consensus       208 ~~~~~~~~~~~~~------~~p~~~~----~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         208 EDYLFQVILEKPI------RIPRFLS----VKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHHHHHhCCC------CCCCCCC----HHHHHHHHHHhccCHHHcCCC
Confidence            2222222211110      1111111    235677788999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.05  E-value=4.6e-10  Score=83.45  Aligned_cols=108  Identities=13%  Similarity=0.022  Sum_probs=67.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|+|||+...    ....+.++|+|+   +|+.+.+..+|..+......  
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s---lGvi~~el~~g~~p~~~~~~--  234 (286)
T cd06638         160 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWS---LGITAIELGDGDPPLADLHP--  234 (286)
T ss_pred             CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhh---HHHHHHHHhcCCCCCCCCch--
Confidence            45689999998863            6788999998321    123467899999   88888888888876432110  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                          ..... ...........++..       ....+..+...|++.+|++||++.++++.
T Consensus       235 ----~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         235 ----MRALF-KIPRNPPPTLHQPEL-------WSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ----hHHHh-hccccCCCcccCCCC-------cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence                00000 000110011111111       11246678889999999999999999863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.05  E-value=4e-11  Score=88.56  Aligned_cols=109  Identities=14%  Similarity=-0.009  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ++..|++||. ......+.++|+|+   ||+.+++..+++.+.......  .
T Consensus       149 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~sDi~s---lG~il~el~~~g~~p~~~~~~--~  222 (273)
T cd05074         149 NMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALES-LADNVYTTHSDVWA---FGVTMWEIMTRGQTPYAGVEN--S  222 (273)
T ss_pred             CCCEEECcccccccccCCcceecCCCccCchhhcCHhH-HhcCccchhhhhHH---HHHHHHHHhhCCCCCCCCCCH--H
Confidence            56789999999874              2357888987 43444567899999   777888888843322111110  0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+..    ....+..  .   ..    .......+.+++..|++.+|++||++.++.+.|+.
T Consensus       223 ~~~~----~~~~~~~--~---~~----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         223 EIYN----YLIKGNR--L---KQ----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             HHHH----HHHcCCc--C---CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            1111    1111110  0   00    01122467889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.05  E-value=1.1e-10  Score=89.10  Aligned_cols=110  Identities=12%  Similarity=0.008  Sum_probs=64.5

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      |++..||+|||+|+.           ||+.|.|||+..+  ......++|+||.|++.|+   .++|..|.....+..  
T Consensus       314 e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfv---cLsG~pPFS~~~~~~--  388 (475)
T KOG0615|consen  314 EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFV---CLSGYPPFSEEYTDP--  388 (475)
T ss_pred             cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEE---EeccCCCcccccCCc--
Confidence            357789999999997           9999999999432  2223368899995555444   445544432211110  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .+    .+....|+.  .+.|    ....+.-++...+.-+-+..+|+.||+..|+++
T Consensus       389 sl----~eQI~~G~y--~f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  389 SL----KEQILKGRY--AFGP----LQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cH----HHHHhcCcc--cccC----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            01    111112221  0111    111222334566667788999999999999875

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.05  E-value=6.1e-10  Score=87.73  Aligned_cols=106  Identities=15%  Similarity=0.072  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +...||+|||++..            ||+.|||||. ........++|+|+   +|++.||.+.|.-+.-+   +.   .
T Consensus       405 ~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEV-vtrk~YG~KVDIWS---LGIMaIEMveGEPPYln---E~---P  474 (550)
T KOG0578|consen  405 DGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEV-VTRKPYGPKVDIWS---LGIMAIEMVEGEPPYLN---EN---P  474 (550)
T ss_pred             CCcEEEeeeeeeeccccccCccccccCCCCccchhh-hhhcccCccccchh---hhhHHHHHhcCCCCccC---CC---h
Confidence            45789999999875            9999999999 65666778999999   77778887777655422   11   1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..-.+.....|.      +.+..  ....-..+-+.-.+|++.++.+||+..|.++
T Consensus       475 lrAlyLIa~ng~------P~lk~--~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  475 LRALYLIATNGT------PKLKN--PEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHHHHHhhcCC------CCcCC--ccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            110111111111      12211  1111123445666899999999999999875

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.04  E-value=5.7e-10  Score=83.22  Aligned_cols=115  Identities=16%  Similarity=0.087  Sum_probs=71.6

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..          ++..|++||. ......+.++|+|+   +|+.+.+..+|..+......+ ......
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~~~-~~~~~~  215 (287)
T cd06621         141 KGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPER-IQGKPYSITSDVWS---LGLTLLEVAQNRFPFPPEGEP-PLGPIE  215 (287)
T ss_pred             CCeEEEeeccccccccccccccccCCccccCHHH-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCcccCC-CCChHH
Confidence            45689999998764          5778999998 44455677899999   888888999998876433110 001111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ... ........ .+.......  ......+.++...|++.+|++||+|.||++
T Consensus       216 ~~~-~~~~~~~~-~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         216 LLS-YIVNMPNP-ELKDEPGNG--IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHH-HHhcCCch-hhccCCCCC--CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            111 11110111 111111100  111245678899999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.04  E-value=7.1e-11  Score=89.74  Aligned_cols=103  Identities=12%  Similarity=-0.033  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ +.....+.++|+|+   +|+.+.+.++|..+....-      .
T Consensus       136 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~G~~pf~~~~------~  205 (323)
T cd05584         136 QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI-LMRSGHGKAVDWWS---LGALMYDMLTGAPPFTAEN------R  205 (323)
T ss_pred             CCCEEEeeCcCCeecccCCCcccccCCCccccChhh-ccCCCCCCcceecc---cHHHHHHHhcCCCCCCCCC------H
Confidence            56799999998763            7889999998 43445568899999   7888888899887643210      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ..... ....+..      .+....    ...+..+...|++.+|.+||     +..++..
T Consensus       206 ~~~~~-~~~~~~~------~~~~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         206 KKTID-KILKGKL------NLPPYL----TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHH-HHHcCCC------CCCCCC----CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            11111 1111110      111111    12456788899999999999     6777654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00284 protein kinase; Provisional

Probab=99.04  E-value=7.5e-11  Score=93.99  Aligned_cols=53  Identities=4%  Similarity=-0.132  Sum_probs=42.8

Q ss_pred             ccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            3 AKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ..+||+|||++..         ||..|+|||. +.....+.++|+|+   ||+.+++.+||+.+..
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~-~~~~~~~~~~DiwS---lGvil~elltG~~pf~  346 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEV-VLGLGWMYSTDMWS---MGCIIYELYTGKLLYD  346 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHH-hhcCCCCcHHHHHH---HHHHHHHHHhCCCCCC
Confidence            3589999998753         7899999998 33445677899999   8888889999987653

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.04  E-value=3.1e-11  Score=91.88  Aligned_cols=54  Identities=7%  Similarity=-0.111  Sum_probs=42.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.               |+..|+|||+..+ ....+.++|+|+   ||+.+.+.+||+.+.
T Consensus       139 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS---lGvvl~el~tg~~pf  208 (338)
T cd07859         139 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS---IGCIFAEVLTGKPLF  208 (338)
T ss_pred             CCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHH---HHHHHHHHHcCCCCC
Confidence            56799999999863               6778999998322 145577899999   888888989987654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.04  E-value=4.7e-11  Score=88.60  Aligned_cols=108  Identities=14%  Similarity=0.021  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|++||. ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       145 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~-----  215 (279)
T cd05057         145 PQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALES-ILHRIYTHKSDVWS---YGVTVWELMTFGAKPYEGI-----  215 (279)
T ss_pred             CCeEEECCCcccccccCcccceecCCCcccccccCHHH-hhcCCcCchhhHHH---HHHHHHHHhcCCCCCCCCC-----
Confidence            46789999999874              1356999998 43455678899999   7777888888 66654321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ...++. .....+..  .-.+       ..+...+..+...|+..+|+.||++.++++.|..
T Consensus       216 -~~~~~~-~~~~~~~~--~~~~-------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~  267 (279)
T cd05057         216 -PAVEIP-DLLEKGER--LPQP-------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSK  267 (279)
T ss_pred             -CHHHHH-HHHhCCCC--CCCC-------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence             111111 11111110  0001       1111345677889999999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.04  E-value=7.3e-11  Score=89.68  Aligned_cols=103  Identities=11%  Similarity=0.035  Sum_probs=66.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+++.+||..+....   .   .
T Consensus       131 ~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~elltg~~Pf~~~---~---~  200 (323)
T cd05571         131 DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQ---D---H  200 (323)
T ss_pred             CCCEEEeeCCCCcccccCCCcccceecCccccChhh-hcCCCCCccccCcc---cchhhhhhhcCCCCCCCC---C---H
Confidence            45789999999874            7899999998 44455678899999   777788888888764321   0   0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                       .........+      +..+....    ...+.++...|++.+|.+||     +..++++
T Consensus       201 -~~~~~~~~~~------~~~~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         201 -EKLFELILME------EIRFPRTL----SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             -HHHHHHHHcC------CCCCCCCC----CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence             0011111111      11111111    12355677899999999999     6877753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.04  E-value=4.7e-10  Score=83.39  Aligned_cols=107  Identities=14%  Similarity=0.094  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            ++..|++||+..    .....+.++|+|+   ||+.+++..+|+.+....    
T Consensus       139 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s---lGvil~el~~g~~p~~~~----  211 (282)
T cd06643         139 DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS---LGITLIEMAQIEPPHHEL----  211 (282)
T ss_pred             CCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhh---HHHHHHHHccCCCCcccc----
Confidence            45789999998864            678999999832    1223456899999   888888888887654221    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        .......... ......+..+   ..+    ...+.++...|++.+|.+||++.++++
T Consensus       212 --~~~~~~~~~~-~~~~~~~~~~---~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         212 --NPMRVLLKIA-KSEPPTLAQP---SRW----SSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             --CHHHHHHHHh-hcCCCCCCCc---ccc----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              1111111111 1110011111   111    134567788999999999999998865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.04  E-value=1.7e-10  Score=85.84  Aligned_cols=117  Identities=10%  Similarity=-0.083  Sum_probs=67.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||. +.....+.++|+|+   +|+.+.+..+|..+....   ......
T Consensus       144 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lG~~l~~l~~g~~~f~~~---~~~~~~  216 (288)
T cd07863         144 GGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEV-LLQSTYATPVDMWS---VGCIFAEMFRRKPLFCGN---SEADQL  216 (288)
T ss_pred             CCCEEECccCccccccCcccCCCccccccccCchH-hhCCCCCCcchhhh---HHHHHHHHHhCCcCcCCC---CHHHHH
Confidence            56789999998874           5778999998 43455678899999   777777777776543211   000011


Q ss_pred             hhhHHhhhC---CCe-------eeeccccccc---cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCE---GNV-------QELMDPVLKE---SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~---~~~-------~~~~d~~l~~---~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........   ...       .....+....   .........+.++...|++.+|.+||++.+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         217 GKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111100000   000       0001110000   000011234567888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.03  E-value=3.9e-11  Score=89.31  Aligned_cols=120  Identities=12%  Similarity=-0.038  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             |+..|+|||+ ......+.++|+|+   +|+.+.+..+|+.+...........
T Consensus       136 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---lGvil~el~~g~~pf~~~~~~~~~~  211 (287)
T cd07848         136 NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPEL-LLGAPYGKAVDMWS---VGCILGELSDGQPLFPGESEIDQLF  211 (287)
T ss_pred             CCcEEEeeccCcccccccccccccccccccccCCcHH-HcCCCCCCchhHHh---HHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            45789999999864             6788999998 33444577899999   7878888889875543211000000


Q ss_pred             hhhhh--------HHhh-hCCCeeeecccccccc------ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKT--------WKLW-CEGNVQELMDPVLKES------FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~--------~~~~-~~~~~~~~~d~~l~~~------~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....        +..+ .........-+.....      +....-..+.++...|++.+|.+||++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         212 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00000        0000 0000000000100000      00011234778889999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.03  E-value=2.7e-10  Score=86.84  Aligned_cols=109  Identities=9%  Similarity=-0.014  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC--Cc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG--GF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~--~~   67 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   +|+.+.+.+||+.+........  ..
T Consensus       132 ~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~~l~el~~g~~Pf~~~~~~~~~~~  207 (329)
T cd05588         132 EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEI-LRGEDYGFSVDWWA---LGVLMFEMMAGRSPFDIVGMSDNPDQ  207 (329)
T ss_pred             CCCEEECcCccccccccCCCccccccCCccccCHHH-HcCCCCCCccceec---hHHHHHHHHHCCCCcccccccccccc
Confidence            46789999998863            7889999998 43445567899999   7888889999988764221111  11


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC------HHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT------MSSVV  124 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~------m~~V~  124 (169)
                      ....+.......+..      .+....    ...+..+...|++.+|.+||+      +.+++
T Consensus       208 ~~~~~~~~~~~~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         208 NTEDYLFQVILEKQI------RIPRSL----SVKASSVLKGFLNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             cchHHHHHHHHcCCC------CCCCCC----CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence            112222222211110      111111    124567788999999999997      56665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.02  E-value=6e-11  Score=87.04  Aligned_cols=108  Identities=17%  Similarity=0.013  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+|++|||+++.             ++..|++||+ ......+.++|+|+   +|+.+++..| |+.+...   ....
T Consensus       139 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~il~~l~t~g~~p~~~---~~~~  211 (261)
T cd05034         139 NLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEA-ANYGRFTIKSDVWS---FGILLTEIVTYGRVPYPG---MTNR  211 (261)
T ss_pred             CCCEEECccccceeccchhhhhhhccCCCccccCHHH-hccCCcCchhHHHH---HHHHHHHHHhCCCCCCCC---CCHH
Confidence            46789999998764             2357999998 44555678899999   8888888888 6654321   1100


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....    ....+.     ....    +......+.++..+|++.+|..||++.++.+.|+.
T Consensus       212 ~~~~----~~~~~~-----~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         212 EVLE----QVERGY-----RMPR----PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHH----HHHcCC-----CCCC----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            1111    111110     0000    11112356788999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.02  E-value=2.3e-10  Score=87.18  Aligned_cols=108  Identities=12%  Similarity=-0.030  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             ||..|+|||...+....+.++|+|+   ||+.+.+.+||..+.......   .
T Consensus       141 ~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~elltg~~pf~~~~~~---~  214 (332)
T cd05614         141 EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWS---LGILIFELLTGASPFTLEGER---N  214 (332)
T ss_pred             CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCcccccc---chhhhhhhhcCCCCCCCCCCC---C
Confidence            46799999999863             7889999998433334567899999   777788888988775321111   1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ...........      .++.+....+    ..+..+...|++.+|.+||     +..++++
T Consensus       215 ~~~~~~~~~~~------~~~~~~~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         215 TQSEVSRRILK------CDPPFPSFIG----PEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CHHHHHHHHhc------CCCCCCCCCC----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            11111111110      1122211111    2355677899999999999     5556653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.02  E-value=1.3e-10  Score=85.60  Aligned_cols=110  Identities=14%  Similarity=0.049  Sum_probs=67.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.            |+..|+|||....  ....+.++|+|+   ||+.+.+.++|+.+......... 
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws---~G~il~el~~g~~p~~~~~~~~~-  217 (267)
T cd06646         142 NGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWA---VGITAIELAELQPPMFDLHPMRA-  217 (267)
T ss_pred             CCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHH---HHHHHHHHHhCCCCccccchhhh-
Confidence            45789999998763            5678999998321  223457899999   88888888898876432111100 


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                           .. .....   ....+.+...  ......+.++...|++.+|.+||++.++++.
T Consensus       218 -----~~-~~~~~---~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         218 -----LF-LMSKS---NFQPPKLKDK--TKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             -----he-eeecC---CCCCCCCccc--cccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence                 00 00000   0011111110  1112356678889999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.02  E-value=4.6e-10  Score=83.76  Aligned_cols=107  Identities=14%  Similarity=0.078  Sum_probs=67.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccccc----ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNI----LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|++||+....    ...+.++|+|+   ||+.+++..+|+.+.....   
T Consensus       164 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s---lGvi~~el~~g~~p~~~~~---  237 (291)
T cd06639         164 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWS---LGITAIELGDGDPPLFDMH---  237 (291)
T ss_pred             CCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHH---HHHHHHHHhhCCCCCCCCc---
Confidence            45689999998774            56789999982211    12468899999   7778888889876643211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ....... ...+....+.++       ......+..+..+|++.+|++||++.++++
T Consensus       238 ---~~~~~~~-~~~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         238 ---PVKTLFK-IPRNPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             ---HHHHHHH-HhcCCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence               0010111 111111111111       112234677889999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.02  E-value=4.7e-10  Score=89.29  Aligned_cols=51  Identities=10%  Similarity=-0.081  Sum_probs=40.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNF   56 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~   56 (169)
                      +..+||+|||+++.              ||..|+|||+ +.....+.++|+|+   ||+.+++.+++..
T Consensus       296 ~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~-~~~~~~~~~sDvwS---lGviL~El~~g~~  360 (461)
T PHA03211        296 PEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEV-LAGDPYTPSVDIWS---AGLVIFEAAVHTA  360 (461)
T ss_pred             CCCEEEcccCCceecccccccccccccCCCcCCcCHHH-HcCCCCCchHHHHH---HHHHHHHHHHcCC
Confidence            46789999999863              7899999998 43455678899999   7778888887664

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.02  E-value=3e-10  Score=87.46  Aligned_cols=54  Identities=7%  Similarity=-0.123  Sum_probs=43.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.           ||..|+|||. +.....+.++|+|+   +|+.+++.+||..+..
T Consensus       159 ~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~DiwS---lG~il~el~tg~~pf~  223 (359)
T cd07876         159 DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV-ILGMGYKENVDIWS---VGCIMGELVKGSVIFQ  223 (359)
T ss_pred             CCCEEEecCCCccccccCccCCCCcccCCCCCchh-ccCCCCCcchhhHH---HHHHHHHHHhCCCCCC
Confidence            56799999999874           6788999998 43445667899999   8888889999987653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.02  E-value=3.7e-10  Score=88.08  Aligned_cols=54  Identities=11%  Similarity=0.004  Sum_probs=44.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.              ||..|+|||+ +.....+.++|+|+   ||+.+++.++|+.+..
T Consensus       221 ~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lGvil~el~~g~~pf~  288 (392)
T PHA03207        221 PENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPEL-LALDPYCAKTDIWS---AGLVLFEMSVKNVTLF  288 (392)
T ss_pred             CCCEEEccCccccccCcccccccccccccccCccCHhH-hcCCCCCchhhHHH---HHHHHHHHHHCCCCCC
Confidence            46789999999853              7889999998 44455677899999   8888899999987753

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.02  E-value=1e-10  Score=85.44  Aligned_cols=103  Identities=17%  Similarity=0.069  Sum_probs=67.0

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ++..|+|||+ ......+.++|+|+   ||+.+++..++..+....      ....
T Consensus       139 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~~l~~~~~~~~~~------~~~~  208 (256)
T cd08220         139 MVVKIGDFGISKILSSKSKAYTVVGTPCYISPEL-CEGKPYNQKSDIWA---LGCVLYELASLKRAFEAA------NLPA  208 (256)
T ss_pred             CEEEEccCCCceecCCCccccccccCCcccCchh-ccCCCCCcccchHH---HHHHHHHHHhCCCCcccC------chHH
Confidence            4579999998874           5778999998 44455677899999   777888888887654221      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .+..... +....+     ..    .....+..+...|++.+|++||++.++++
T Consensus       209 ~~~~~~~-~~~~~~-----~~----~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         209 LVLKIMS-GTFAPI-----SD----RYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHh-cCCCCC-----CC----CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1111111 111111     11    11234567888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.02  E-value=2.4e-10  Score=88.21  Aligned_cols=53  Identities=8%  Similarity=-0.142  Sum_probs=43.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.           ||..|+|||. +.....+.++|+|+   +|+.+++.++|+.+.
T Consensus       162 ~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~DiwS---lG~il~ell~g~~pf  225 (364)
T cd07875         162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDIWS---VGCIMGEMIKGGVLF  225 (364)
T ss_pred             CCcEEEEeCCCccccCCCCcccCCcccCCcCCHHH-HhCCCCCchhhHHh---HHHHHHHHHhCCCCC
Confidence            56799999999874           6889999998 43455677899999   888888889987654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.01  E-value=1.4e-10  Score=86.02  Aligned_cols=104  Identities=16%  Similarity=0.183  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++.+|++||+ ......+.++|+|+   ||+.+.+..+|..+....      ..
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~s---lG~~l~~l~~g~~p~~~~------~~  206 (277)
T cd06641         137 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV-IKQSAYDSKADIWS---LGITAIELAKGEPPHSEL------HP  206 (277)
T ss_pred             CCCEEEeecccceecccchhhhccccCCccccChhh-hccCCCCchhhHHH---HHHHHHHHHcCCCCCCcc------ch
Confidence            45789999998863            6778999998 43455667899999   777788888988764321      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..+.. ....+.     -+.+....    ...+.++...|++.+|.+||+|.+++.
T Consensus       207 ~~~~~-~~~~~~-----~~~~~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         207 MKVLF-LIPKNN-----PPTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHH-HHhcCC-----CCCCCccc----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            11111 111111     01111111    234567888999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.01  E-value=2.1e-10  Score=85.20  Aligned_cols=106  Identities=16%  Similarity=0.043  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|+|||....    ....+.++|+|+   ||+.+.+.++|..+....... 
T Consensus       157 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvws---lG~~l~el~~g~~p~~~~~~~-  232 (282)
T cd06636         157 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWS---LGITAIEMAEGAPPLCDMHPM-  232 (282)
T ss_pred             CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhH---HHHHHHHHHhCCCCccccCHH-
Confidence            45689999998763            6778999997321    234567899999   888888999988764321100 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                              .....   ......+.+..   ......+.++...|++.+|.+||+..++++
T Consensus       233 --------~~~~~---~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         233 --------RALFL---IPRNPPPKLKS---KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             --------hhhhh---HhhCCCCCCcc---cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence                    00000   00011111111   111235677888999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.01  E-value=9.2e-11  Score=87.16  Aligned_cols=110  Identities=10%  Similarity=-0.017  Sum_probs=69.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||++..           |+..|+|||+ ......+.++|+|+   +|+.+.+.++|..+........  ...
T Consensus       131 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lGv~l~el~~g~~p~~~~~~~~--~~~  204 (277)
T cd05607         131 QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEI-LKEEPYSYPVDWFA---MGCSIYEMVAGRTPFKDHKEKV--AKE  204 (277)
T ss_pred             CCCEEEeeceeeeecCCCceeeccCCCCCccCHHH-HccCCCCCchhHHH---HHHHHHHHHhCCCCCCCCcchh--hHH
Confidence            45789999998863           7889999998 43445778899999   8888889999988753211110  000


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ....... ...    +... ...+    ...+.++...|++.+|.+||+..|+++.+
T Consensus       205 ~~~~~~~-~~~----~~~~-~~~~----~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         205 ELKRRTL-EDE----VKFE-HQNF----TEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             HHHHHhh-ccc----cccc-cccC----CHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            1111111 000    0000 0111    12356788899999999999998776544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.01  E-value=5.4e-10  Score=82.90  Aligned_cols=118  Identities=15%  Similarity=0.089  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ++..|+|||+.......+.++|+|+   ||+.+.+..+|..+.....   .....
T Consensus       135 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s---~G~~l~el~~g~~~~~~~~---~~~~~  208 (283)
T cd07830         135 PEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWA---LGCIMAELYTLRPLFPGSS---EIDQL  208 (283)
T ss_pred             CCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhh---HHHHHHHHHhCCCccCCCC---hHHHH
Confidence            46789999998874           5678999997333444678899999   7888888888864432111   00111


Q ss_pred             hhhHHh--------hhCC-Ceeeecccccc-------ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKL--------WCEG-NVQELMDPVLK-------ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~--------~~~~-~~~~~~d~~l~-------~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......        +..+ .....++..+.       ..........+..+...|++.+|.+||++.|++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         209 YKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            110000        0000 00000110100       0000011245778999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.01  E-value=2e-10  Score=84.66  Aligned_cols=102  Identities=14%  Similarity=0.064  Sum_probs=64.2

Q ss_pred             ceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhhhhHH
Q 041157            5 QKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVYKTWK   75 (169)
Q Consensus         5 ~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~~~~~   75 (169)
                      .|++|||++..        ++..|+|||+.......+.++|+|+   ||+.+.+.++ +..+....      ..... ..
T Consensus       151 ~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~~l~el~~~~~~p~~~~------~~~~~-~~  220 (262)
T cd05077         151 IKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWS---FGTTLWEICYNGEIPLKDK------TLAEK-ER  220 (262)
T ss_pred             eEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHH---HHHHHHHHHhCCCCCCCCc------chhHH-HH
Confidence            79999998864        6788999998333455677899999   7777777664 44332111      01000 00


Q ss_pred             hhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           76 LWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        76 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      .. .+.. ....     ..    ...+..+...|++.+|.+||++.++++.+
T Consensus       221 ~~-~~~~-~~~~-----~~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         221 FY-EGQC-MLVT-----PS----CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HH-hcCc-cCCC-----CC----hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            11 1110 0111     11    13456788899999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.00  E-value=4.9e-10  Score=82.66  Aligned_cols=112  Identities=15%  Similarity=0.036  Sum_probs=65.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc------cccCCccccCCCCCCcCHHHHHHHH-hCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN------ILRGNKKVESQELPLFPLDLIHEAT-RNFSNEN   60 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~------~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~   60 (169)
                      +.++||+|||+++.              ++..|+|||+...      ....+.++|+|+   ||+.+++..+ +..+...
T Consensus       136 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws---lG~~l~el~~~~~~p~~~  212 (269)
T cd05042         136 DLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWS---LGVTMWELFTAADQPYPD  212 (269)
T ss_pred             CCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHH---HHHHHHHHHhCCCCCCCc
Confidence            56789999999864              2456999997221      224467899999   8888888888 4443221


Q ss_pred             CCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           61 KLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        61 ~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ....   ..   ...... .....+.++.+....+    ..+..+...|+ .+|++||++.+|.+.|.
T Consensus       213 ~~~~---~~---~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         213 LSDE---QV---LKQVVR-EQDIKLPKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCHH---HH---HHHHhh-ccCccCCCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            1000   00   011111 1111222333322222    23344566787 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.00  E-value=1.9e-10  Score=91.36  Aligned_cols=115  Identities=15%  Similarity=0.085  Sum_probs=75.2

Q ss_pred             CcccceeeeeEeecC----------C----CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH--hCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------G----RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT--RNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------g----t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t--~~~~~~~~~~~   64 (169)
                      ++|++||||||.+|.          |    ...|||+|. .-.++-+.++|+|+   ||+.+.|..+  ...+.....++
T Consensus       672 ~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEs-illgkFttaSDvWa---fgvTlwE~~~~C~e~Py~~lt~e  747 (807)
T KOG1094|consen  672 GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWES-ILLGKFTTASDVWA---FGVTLWEVFMLCREQPYSQLTDE  747 (807)
T ss_pred             CcccEEecCcccccccccCCceeeecceeeeeeehhHHH-HHhccccchhhhhh---hHHHHHHHHHHHhhCchhhhhHH
Confidence            479999999999995          2    368999998 33667788999999   5555555443  33333222221


Q ss_pred             CCcchhhhhHHhhhCCCee-eeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQ-ELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..++.....+..+... -+.-|       .-+...+.++.+.||..+..+||++.++...|+.
T Consensus       748 ---~vven~~~~~~~~~~~~~l~~P-------~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  748 ---QVVENAGEFFRDQGRQVVLSRP-------PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             ---HHHHhhhhhcCCCCcceeccCC-------CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence               1233333333222211 12222       2344567799999999999999999999998876

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.00  E-value=5.4e-10  Score=85.46  Aligned_cols=54  Identities=9%  Similarity=-0.015  Sum_probs=43.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.         ||..|+|||+..+....+.++|+|+   +|+.+.+..+|..+.
T Consensus       154 ~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~pf  216 (343)
T cd07878         154 DCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS---VGCIMAELLKGKALF  216 (343)
T ss_pred             CCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHh---HHHHHHHHHHCCCCC
Confidence            56799999999875         6889999998444455678899999   888888888987654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=1.6e-10  Score=89.40  Aligned_cols=102  Identities=11%  Similarity=-0.006  Sum_probs=71.4

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccc-cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNIL-RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~-~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      .+.||+|||++..            ||..|+|||...+.. ....++|+||   +|+.+...++|..|....      ..
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS---~GViLy~ml~G~~PF~d~------~~  228 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWS---LGVILYVLLCGRLPFDDS------NV  228 (370)
T ss_pred             CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhh---hHHHHHHHHhCCCCCCCc------cH
Confidence            7899999999984            899999999955555 6679999999   777788888998886541      11


Q ss_pred             hhhhHHhhhCCC--eeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGN--VQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....+ ....+.  +-..++           -..+..+...|+..+|..|+++.+|..
T Consensus       229 ~~l~~-ki~~~~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  229 PNLYR-KIRKGEFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HHHHH-HHhcCCccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            11111 111111  111111           234567788999999999999999983

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.99  E-value=3.4e-10  Score=82.80  Aligned_cols=105  Identities=13%  Similarity=0.110  Sum_probs=67.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+|++|||+++.            |+..|+|||+ ......+.++|+|+   ||+.+.+.++|..+....      ..
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~~Dv~s---lG~i~~~l~~g~~p~~~~------~~  205 (255)
T cd08219         136 NGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEI-WENMPYNNKSDIWS---LGCILYELCTLKHPFQAN------SW  205 (255)
T ss_pred             CCcEEEcccCcceeecccccccccccCCccccCHHH-HccCCcCchhhhhh---hchhheehhhccCCCCCC------CH
Confidence            45789999998864            6678999998 44455678899999   666677777887664321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ..... ....+.... +.    ...+    ..+..+...|++.+|.+||++.+++..
T Consensus       206 ~~~~~-~~~~~~~~~-~~----~~~~----~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         206 KNLIL-KVCQGSYKP-LP----SHYS----YELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHH-HHhcCCCCC-CC----cccC----HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            11111 111111110 11    1111    235667789999999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.99  E-value=7.4e-10  Score=81.36  Aligned_cols=110  Identities=19%  Similarity=0.125  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..          ++..|++||+ ......+.++|+|+   ||+.+++..+|..+...... .......
T Consensus       137 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~s---lG~~l~~l~~g~~p~~~~~~-~~~~~~~  211 (265)
T cd06605         137 RGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER-IQGNDYSVKSDIWS---LGLSLIELATGRFPYPPEND-PPDGIFE  211 (265)
T ss_pred             CCCEEEeecccchhhHHHHhhcccCChhccCHHH-HcCCCCCchhhHHH---HHHHHHHHHhCCCCCCcccc-ccccHHH
Confidence            45789999998864          6789999998 44456678899999   88888899998877532211 1111222


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... +     .-+.+...   ..-..+..+...|+..+|.+||++.+++.
T Consensus       212 ~~~~~~~-~-----~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         212 LLQYIVN-E-----PPPRLPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHhc-C-----CCCCCChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            1111111 1     01111111   02234667778999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.99  E-value=1.7e-10  Score=84.97  Aligned_cols=104  Identities=13%  Similarity=0.045  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +..+||+|||+++.                  |+..|+|||+ ......+.++|+|+   +|+.+++..+|..+....-.
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~~  217 (267)
T cd06628         142 KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEV-VKQTSYTRKADIWS---LGCLVVEMLTGKHPFPDCTQ  217 (267)
T ss_pred             CCCEEecccCCCcccccccccCCccccccccCCCcCccChhH-hccCCCCchhhhHH---HHHHHHHHhhCCCCCCCccH
Confidence            56789999997653                  4568999998 43445567899999   88888899998876532100


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                            .......      .+...+.+...    ....+..+...|++.+|.+||++.+|++
T Consensus       218 ------~~~~~~~------~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         218 ------LQAIFKI------GENASPEIPSN----ISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ------HHHHHHH------hccCCCcCCcc----cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                  0001000      01111222111    2234566777999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.99  E-value=2.1e-10  Score=86.87  Aligned_cols=108  Identities=18%  Similarity=0.079  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..        |+..|+|||+..  .....+.++|+|+   ||+.+.+.++|..+....   .   ...
T Consensus       161 ~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~s---lGvil~el~~g~~p~~~~---~---~~~  231 (317)
T cd06635         161 PGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNM---N---AMS  231 (317)
T ss_pred             CCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHH---HHHHHHHHHhCCCCCCCc---c---HHH
Confidence            45789999998764        678999999843  2345678899999   888888888988664221   0   000


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      .. .....+..     +....   ......+..+...|++.+|.+||++.+|++.+
T Consensus       232 ~~-~~~~~~~~-----~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         232 AL-YHIAQNES-----PTLQS---NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             HH-HHHHhccC-----CCCCC---ccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            00 01111100     01101   11123466788899999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.99  E-value=1.6e-10  Score=85.32  Aligned_cols=108  Identities=12%  Similarity=-0.041  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||+ ......+.++|+|+   ||+.+++.++ |..+.......   
T Consensus       143 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~pf~~~~~~---  215 (270)
T cd05056         143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPES-INFRRFTSASDVWM---FGVCMWEILMLGVKPFQGVKNN---  215 (270)
T ss_pred             CCCeEEccCceeeecccccceecCCCCccccccChhh-hccCCCCchhhhHH---HHHHHHHHHHcCCCCCCCCCHH---
Confidence            35689999999874             2357999998 44455678899999   7777888775 65543211100   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....    ....+...     .....    ....+.++..+|+..+|++||++.+++..|+.
T Consensus       216 ~~~~----~~~~~~~~-----~~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         216 DVIG----RIENGERL-----PMPPN----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             HHHH----HHHcCCcC-----CCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1111    11111110     01111    12356678889999999999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.99  E-value=1.1e-10  Score=88.38  Aligned_cols=102  Identities=12%  Similarity=0.026  Sum_probs=65.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   ||+.+.+.++|..+....   .   .
T Consensus       132 ~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~ell~G~~Pf~~~---~---~  201 (316)
T cd05592         132 DGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEI-LKGQKYNESVDWWS---FGVLLYEMLIGQSPFHGE---D---E  201 (316)
T ss_pred             CCCEEEccCcCCeECCCCCCccccccCCccccCHHH-HcCCCCCCcccchh---HHHHHHHHHhCCCCCCCC---C---H
Confidence            46789999999863            7899999998 43445678899999   788888888988765321   0   0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                      .. ........      .+.+....+    ..+..+...|++.+|.+||++.+.+
T Consensus       202 ~~-~~~~i~~~------~~~~~~~~~----~~~~~ll~~~l~~~P~~R~~~~~~l  245 (316)
T cd05592         202 DE-LFDSILND------RPHFPRWIS----KEAKDCLSKLFERDPTKRLGVDGDI  245 (316)
T ss_pred             HH-HHHHHHcC------CCCCCCCCC----HHHHHHHHHHccCCHHHcCCChHHH
Confidence            01 11111110      011111111    2345677799999999999986433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.99  E-value=1e-10  Score=87.42  Aligned_cols=118  Identities=8%  Similarity=-0.031  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||...+....+.++|+|+   +|+.+.+..||+.+.......   ..
T Consensus       139 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~~l~~l~~g~~pf~~~~~~---~~  212 (288)
T cd07871         139 KGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWG---VGCILYEMATGRPMFPGSTVK---EE  212 (288)
T ss_pred             CCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHH---HHHHHHHHHhCCCCCCCCCHH---HH
Confidence            46799999999863            5788999998444455678899999   888888999988654321110   01


Q ss_pred             hhhhHHh--------hhC----CCeeeecccccccccc----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKL--------WCE----GNVQELMDPVLKESFI----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~--------~~~----~~~~~~~d~~l~~~~~----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......        +..    ......+.+.......    ...-..+.++...|++.+|.+|||..|+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         213 LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            1111100        000    0001111111100000    001123567888999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.99  E-value=1.9e-10  Score=88.96  Aligned_cols=118  Identities=10%  Similarity=0.010  Sum_probs=68.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             ++..|+|||+..+....+.++|+|+   +|+.+.+.++|+.+....-.   ..
T Consensus       139 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~~~---~~  212 (372)
T cd07853         139 NCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWS---VGCIFAELLGRRILFQAQSP---IQ  212 (372)
T ss_pred             CCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHh---HHHHHHHHHcCCCCCCCCCH---HH
Confidence            56799999999874             4678999998444444577899999   78888888898765432110   00


Q ss_pred             hhhhhHHhhhCCCe----------ee-ecc----c-cccc--cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNV----------QE-LMD----P-VLKE--SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~----------~~-~~d----~-~l~~--~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..............          .. +..    + ....  .........+.++...|++.+|.+||++.+++.
T Consensus       213 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         213 QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            01000000000000          00 000    0 0000  000011234677888999999999999999975

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.99  E-value=1e-10  Score=87.62  Aligned_cols=108  Identities=19%  Similarity=0.148  Sum_probs=67.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccccc---ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNI---LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~---~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.           ++..|+|||+..+.   ...+.++|+|+   ||+.+++.++|+.+....  ...+
T Consensus       151 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~--~~~~  225 (296)
T cd06618         151 SGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWS---LGISLVELATGQFPYKNC--KTEF  225 (296)
T ss_pred             CCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHH---HHHHHHHHHhCCCCCCcc--hhHH
Confidence            56799999998864           56789999983211   22567899999   888888888988775321  0000


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ......... .     .+.+..  .......+.++..+|++.+|.+||++.+++.
T Consensus       226 ---~~~~~~~~~-~-----~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         226 ---EVLTKILQE-E-----PPSLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             ---HHHHHHhcC-C-----CCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               001111111 0     001100  0011234677888999999999999999975

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.98  E-value=2e-10  Score=87.48  Aligned_cols=103  Identities=11%  Similarity=-0.038  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   +|+.+.++++|..+....-      .
T Consensus       131 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~elltG~~Pf~~~~------~  200 (328)
T cd05593         131 DGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQD------H  200 (328)
T ss_pred             CCcEEEecCcCCccCCCcccccccccCCcCccChhh-hcCCCCCccCCccc---cchHHHHHhhCCCCCCCCC------H
Confidence            56789999998864            7889999998 44455678899999   7778888899887653210      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ..... ....+      +..+.....    ..+..+...|++.+|.+||     +..++.+
T Consensus       201 ~~~~~-~~~~~------~~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         201 EKLFE-LILME------DIKFPRTLS----ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HHHHH-HhccC------CccCCCCCC----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            00010 11000      111111111    2355677799999999997     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=4.8e-10  Score=82.13  Aligned_cols=108  Identities=16%  Similarity=0.081  Sum_probs=68.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccc---cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNIL---RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~---~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||++..            ++..|++||. ....   ..+.++|+|+   ||+.+.+.+||..+.......  
T Consensus       137 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~-~~~~~~~~~~~~~Di~s---lG~~l~~~~tg~~p~~~~~~~--  210 (262)
T cd06613         137 DGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEV-AAVERKGGYDGKCDIWA---LGITAIELAELQPPMFDLHPM--  210 (262)
T ss_pred             CCCEEECccccchhhhhhhhccccccCCccccCchh-hcccccCCcCchhhhHH---HHHHHHHHHhCCCCCCCCCHH--
Confidence            45789999998764            5668999998 3333   5667899999   888888999988765321100  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          .... .....   ..-.+.+..  .......+.++..+|++.+|..||++.+|+.
T Consensus       211 ----~~~~-~~~~~---~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         211 ----RALF-LISKS---NFPPPKLKD--KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             ----HHHH-HHHhc---cCCCccccc--hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                0000 01111   001111111  1122345778899999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.98  E-value=3.8e-10  Score=83.80  Aligned_cols=118  Identities=8%  Similarity=-0.060  Sum_probs=67.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+++.+||..+....-...  .+
T Consensus       135 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~~~~~--~~  209 (283)
T cd07835         135 EGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS---IGCIFAEMVNRRPLFPGDSEID--QL  209 (283)
T ss_pred             CCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHH---HHHHHHHHHhCCCCCCCCCHHH--HH
Confidence            46789999998864            3678999998443334567899999   8888888899876532110000  00


Q ss_pred             hh----------hhHHhhhC-----CCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VY----------KTWKLWCE-----GNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~----------~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..          +.|.....     ..........+.. ........+.++...|++.+|.+||+|.+|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         210 FRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSK-VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhh-hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00          00000000     0000000000000 00111135678899999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.98  E-value=3.3e-10  Score=84.07  Aligned_cols=103  Identities=12%  Similarity=0.027  Sum_probs=65.4

Q ss_pred             ceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHH-HhCCCCCCCCCCCCcchhhhhHH
Q 041157            5 QKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEA-TRNFSNENKLGEGGFGPVYKTWK   75 (169)
Q Consensus         5 ~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~-t~~~~~~~~~~~~~~~lv~~~~~   75 (169)
                      .|++|||+++.        ++..|+|||+..+....+.++|+|+   ||+.+++.. +|..+.......   ..    ..
T Consensus       163 ~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s---lG~~l~el~~~g~~p~~~~~~~---~~----~~  232 (274)
T cd05076         163 IKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWS---FGTTLLEICFDGEVPLKERTPS---EK----ER  232 (274)
T ss_pred             eeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCccccChH---HH----HH
Confidence            69999998763        6788999998333345678899999   777777764 455443211100   00    00


Q ss_pred             hhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           76 LWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        76 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      .+...       ..+....    ...+..++..|++.+|++||+|.+|++.|.
T Consensus       233 ~~~~~-------~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         233 FYEKK-------HRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHhc-------cCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            11100       0011111    124677888999999999999999998773

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.98  E-value=4.1e-10  Score=83.62  Aligned_cols=119  Identities=8%  Similarity=-0.082  Sum_probs=68.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+.+.+||+.+.......  ...
T Consensus       135 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~tg~~p~~~~~~~--~~~  209 (284)
T cd07839         135 NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS---AGCIFAELANAGRPLFPGNDV--DDQ  209 (284)
T ss_pred             CCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHH---HHHHHHHHHhcCCCCcCCCCH--HHH
Confidence            45789999998874            4678999998443334567899999   888888999988764221110  000


Q ss_pred             hhhhHHhhhCC------Ceeeeccccc----cccc-----cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEG------NVQELMDPVL----KESF-----ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~------~~~~~~d~~l----~~~~-----~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........      .+.++.+...    ....     .......+.++...|++.+|.+|||+.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         210 LKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            00000000000      0000001000    0000     0011235567888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.98  E-value=4.1e-10  Score=83.43  Aligned_cols=117  Identities=9%  Similarity=-0.056  Sum_probs=69.3

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ++..|+|||+.......+.++|+|+   +|+.+++.++|..+...   ......+.
T Consensus       136 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lGv~l~el~~~~~p~~~---~~~~~~~~  209 (282)
T cd07831         136 DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWA---VGCVFFEILSLFPLFPG---TNELDQIA  209 (282)
T ss_pred             CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHH---HHHHHHHHHcCCcCCCC---CCHHHHHH
Confidence            4689999999874           5678999997343445577899999   77778888887654321   11111222


Q ss_pred             hhHHhh-----------hCCCeeeecccccccc----ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLW-----------CEGNVQELMDPVLKES----FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~-----------~~~~~~~~~d~~l~~~----~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +.....           ..........+.....    ........+.++...|++.+|.+||++.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         210 KIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            211111           0000011111110000    00122356788889999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.97  E-value=4.1e-10  Score=85.83  Aligned_cols=102  Identities=14%  Similarity=0.045  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||+ +.....+.++|+|+   ||+.+.+.+||..+....   .   . ..
T Consensus       154 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~elltg~~pf~~~---~---~-~~  222 (329)
T PTZ00263        154 KGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEV-IQSKGHGKAVDWWT---MGVLLYEFIAGYPPFFDD---T---P-FR  222 (329)
T ss_pred             CCCEEEeeccCceEcCCCcceecCChhhcCHHH-HcCCCCCCcceeec---hHHHHHHHHcCCCCCCCC---C---H-HH
Confidence            56799999999874         7889999998 44455578899999   777888888988764321   0   0 01


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVV  124 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~  124 (169)
                      .......+..      .+....+    ..+..+...|++.+|.+||+     ..++.
T Consensus       223 ~~~~i~~~~~------~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        223 IYEKILAGRL------KFPNWFD----GRARDLVKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             HHHHHhcCCc------CCCCCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            1111111111      0111111    23567888999999999997     56665

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.97  E-value=2.2e-10  Score=85.12  Aligned_cols=54  Identities=11%  Similarity=-0.128  Sum_probs=41.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   +|+.+.+..||+.+.
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~il~~l~tg~~~~  202 (285)
T cd07861         137 KGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWS---IGTIFAEMATKKPLF  202 (285)
T ss_pred             CCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHH---HHHHHHHHHHCCCCC
Confidence            56789999998863            4678999997333334567899999   888888999987544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.97  E-value=4.3e-10  Score=83.03  Aligned_cols=110  Identities=13%  Similarity=0.054  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccc-cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNIL-RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~-~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              |+..|++||+..... ..+.++|+|+   +|+.+++..+|..+....     
T Consensus       144 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~s---lG~~l~~l~~g~~p~~~~-----  215 (272)
T cd06629         144 DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWS---LGCVVLEMFAGRRPWSDE-----  215 (272)
T ss_pred             CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHH---HHHHHHHHHhCCCCCcCc-----
Confidence            56789999998863              567899999833222 3577899999   888888999988764211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ............ .....+......    .....+..+...|++.+|+.||+|.+|++
T Consensus       216 -~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         216 -EAIAAMFKLGNK-RSAPPIPPDVSM----NLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             -chHHHHHHhhcc-ccCCcCCccccc----cCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence             011111111111 111111212111    12235666778999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.97  E-value=7.6e-10  Score=87.36  Aligned_cols=106  Identities=13%  Similarity=0.141  Sum_probs=67.7

Q ss_pred             ccceeeeeEeecC--------------CCCCCCCCCcccc----------cccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            3 AKQKVLQFLRSGE--------------GRTGDDDEGYSYN----------ILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         3 ~~~Ki~dFgls~~--------------gt~~y~ape~~~~----------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ...||.|||+|..              ||..||+||-...          ......++|+|+   +|..+.+.+-|+-|.
T Consensus       496 G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS---LGCILYqMvYgktPf  572 (677)
T KOG0596|consen  496 GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS---LGCILYQMVYGKTPF  572 (677)
T ss_pred             eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhh---hhhHHHHHHhcCCch
Confidence            4679999999985              9999999996321          112457899999   555555555555442


Q ss_pred             CCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccH-HHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           59 ENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFIL-EEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        59 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .         -....|.     ++..+.||.-.-+++. ..-..+++++..|++.||++||++.++++
T Consensus       573 ~---------~~~n~~a-----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  573 G---------QIINQIA-----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             H---------HHHHHHH-----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            1         1111111     2334666643222211 01122888999999999999999999875

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.97  E-value=4e-10  Score=82.71  Aligned_cols=109  Identities=17%  Similarity=0.078  Sum_probs=69.4

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...||+|||++..                |+..|++||+.......+.++|+|+   ||+.+++.++|..+....... 
T Consensus       138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~s---lG~i~~~l~~g~~p~~~~~~~-  213 (267)
T cd06610         138 DGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWS---FGITAIELATGAAPYSKYPPM-  213 (267)
T ss_pred             CCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHh---HhHHHHHHHhCCCCccccChh-
Confidence            56789999998753                5678999998333335678899999   888889999998875332111 


Q ss_pred             CcchhhhhHHhhhCCCeeeecccccccccc-HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFI-LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                           ........ .     ..+.+..... ......+..+...|++.+|++||++.+++.
T Consensus       214 -----~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         214 -----KVLMLTLQ-N-----DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             -----hhHHHHhc-C-----CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                 00011111 0     1111111100 122245677888999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.97  E-value=1.3e-10  Score=88.66  Aligned_cols=118  Identities=9%  Similarity=-0.043  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC-----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +..+||+|||+++.                 |+..|++||...+....+.++|+|+   ||+.+++.+||+.+.......
T Consensus       143 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s---lG~~l~el~tg~~pf~~~~~~  219 (337)
T cd07852         143 DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWS---VGCILGEMLLGKPLFPGTSTL  219 (337)
T ss_pred             CCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHH---HHHHHHHHHhCCCCCCCCChH
Confidence            56799999998873                 4667999997444445567899999   888888889987654221100


Q ss_pred             CCcchhhhhHHh-----------hhCCCeeeecccccccc------ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           65 GGFGPVYKTWKL-----------WCEGNVQELMDPVLKES------FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        65 ~~~~lv~~~~~~-----------~~~~~~~~~~d~~l~~~------~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         .........           +......++++......      ...+....+.++..+|++.+|++||++.+++.
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         220 ---NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             ---HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence               011000000           00000001111000000      00012245678899999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=4.7e-10  Score=86.98  Aligned_cols=116  Identities=15%  Similarity=0.072  Sum_probs=74.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH--hCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT--RNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t--~~~~~~~~~~~~~~~   68 (169)
                      +...|||||||||.           .|.-|-|||++++....+.++|+|+   +|..+.|+.+  --|++.     .+.+
T Consensus       146 ~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA---~GcI~aEl~sLrPLFPG~-----sE~D  217 (538)
T KOG0661|consen  146 NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWA---VGCIMAELYSLRPLFPGA-----SEID  217 (538)
T ss_pred             cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHH---HHHHHHHHHHhcccCCCC-----cHHH
Confidence            45689999999997           7889999999888999999999999   6655555443  334433     3333


Q ss_pred             hhhhhHHhhhCCC---------eeeeccccc---ccc----ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGN---------VQELMDPVL---KES----FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~---------~~~~~d~~l---~~~----~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..+++...+..-.         +...+.-++   .+.    -..+....++++.-.|++-||++|||..+.++
T Consensus       218 qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  218 QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence            4444333321100         011111111   000    01124456778888999999999999999876

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.96  E-value=4.4e-10  Score=84.39  Aligned_cols=106  Identities=13%  Similarity=0.009  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|++||+ ......+.++|+|+   ||+.+.+..+|..+....-...   .
T Consensus       151 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lGvil~~l~tg~~pf~~~~~~~---~  223 (297)
T cd06656         151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMVEGEPPYLNENPLR---A  223 (297)
T ss_pred             CCCEEECcCccceEccCCccCcCcccCCccccCHHH-HcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCcch---h
Confidence            45789999998763            5678999998 44455568899999   7777888888886642211000   0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...   ....+      .+.+.  .+......+.++...|++.+|++||++.+|++
T Consensus       224 ~~~---~~~~~------~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         224 LYL---IATNG------TPELQ--NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             eee---eccCC------CCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000   00000      00110  01111233556778999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=3.6e-10  Score=83.68  Aligned_cols=106  Identities=13%  Similarity=0.079  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            |+..|+|||+..+....+.++|+|+   ||+.+.+.++|..+....      ..
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~~l~~ll~g~~p~~~~------~~  207 (277)
T cd06917         137 TGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWS---LGITIYEMATGNPPYSDV------DA  207 (277)
T ss_pred             CCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHH---HHHHHHHHHhCCCCCCCC------Ch
Confidence            45789999998764            6678999998333334567899999   787888888988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..+.. .     +.....+.+...   .....+.++...|++.+|++||++.+++.
T Consensus       208 ~~~~~-~-----~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         208 FRAMM-L-----IPKSKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             hhhhh-c-----cccCCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            11110 0     001111222111   12234667888999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.96  E-value=9e-10  Score=82.54  Aligned_cols=106  Identities=13%  Similarity=0.055  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            |+..|+|||+ ......+.++|+|+   ||+.+++..+|..+....   ..   
T Consensus       154 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lGvil~el~~g~~p~~~~---~~---  223 (292)
T cd06658         154 DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEV-ISRLPYGTEVDIWS---LGIMVIEMIDGEPPYFNE---PP---  223 (292)
T ss_pred             CCCEEEccCcchhhcccccccCceeecCccccCHHH-HccCCCCchhhHHH---HHHHHHHHHhCCCCCCCC---CH---
Confidence            56899999998763            6788999998 44455677899999   888888999988764321   00   


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. ......     ..+.+.+....  .....+..+...|++.+|.+||++.++++
T Consensus       224 ~~-~~~~~~-----~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         224 LQ-AMRRIR-----DNLPPRVKDSH--KVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             HH-HHHHHH-----hcCCCcccccc--ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            00 000111     11111111110  01123445667899999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.95  E-value=9.7e-11  Score=89.38  Aligned_cols=122  Identities=10%  Similarity=-0.046  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               |+..|+|||...+....+.++|+|+   +|+.+++.++|+.+....   ..
T Consensus       142 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws---lGvil~el~~G~~~f~~~---~~  215 (336)
T cd07849         142 NCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWS---VGCILAEMLSNRPLFPGK---DY  215 (336)
T ss_pred             CCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCC---CH
Confidence            45789999998864               4677999997443445677899999   888888888987543211   00


Q ss_pred             cchhhhhHHhhhCC---Ceeeeccccc-------c--cccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH--H
Q 041157           67 FGPVYKTWKLWCEG---NVQELMDPVL-------K--ESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVVM--L  127 (169)
Q Consensus        67 ~~lv~~~~~~~~~~---~~~~~~d~~l-------~--~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~--L  127 (169)
                      .....+....+...   ....+.+...       .  ....     ......+..+...|++.+|.+||++.+++..  +
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~  295 (336)
T cd07849         216 LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYL  295 (336)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence            01111111111100   0001111100       0  0000     0112356788999999999999999999874  5


Q ss_pred             hc
Q 041157          128 AT  129 (169)
Q Consensus       128 ~~  129 (169)
                      +.
T Consensus       296 ~~  297 (336)
T cd07849         296 EQ  297 (336)
T ss_pred             cc
Confidence            44

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=3.4e-10  Score=83.34  Aligned_cols=107  Identities=16%  Similarity=0.045  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|+|||+...    ....+.++|+|+   ||+.+.+..||..+.....   
T Consensus       149 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~---  222 (275)
T cd06608         149 NAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWS---LGITAIELADGKPPLCDMH---  222 (275)
T ss_pred             CCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHH---hHHHHHHHHhCCCCccccc---
Confidence            56789999998753            6778999997321    123456799999   7777888888877643210   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ...... ....+     ..+.+..  .......+.++..+|+..+|++||++.++++
T Consensus       223 ---~~~~~~-~~~~~-----~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         223 ---PMRALF-KIPRN-----PPPTLKS--PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             ---hHHHHH-Hhhcc-----CCCCCCc--hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence               000000 00011     1111111  1112345667888999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.95  E-value=1.8e-10  Score=87.58  Aligned_cols=103  Identities=12%  Similarity=0.008  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+.+.++|+.+....-..   .+
T Consensus       131 ~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~ell~g~~Pf~~~~~~---~~  203 (323)
T cd05595         131 DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQDHE---RL  203 (323)
T ss_pred             CCCEEecccHHhccccCCCCccccccCCcCcCCccc-ccCCCCCchhchhh---hHHHHHHHHhCCCCCCCCCHH---HH
Confidence            46789999998764            7889999998 44455678899999   777888889988765321100   00


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      .    .....+.      ..+....+    ..+.++...|++.+|.+||     +..++++
T Consensus       204 ~----~~~~~~~------~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         204 F----ELILMEE------IRFPRTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             H----HHHhcCC------CCCCCCCC----HHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            0    0110010      01111112    2345677789999999998     7777754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.95  E-value=2.3e-10  Score=86.95  Aligned_cols=100  Identities=10%  Similarity=-0.078  Sum_probs=64.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ +.....+.++|+|+   ||+.+.+.++|..+....-      .
T Consensus       137 ~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~G~~pf~~~~------~  206 (324)
T cd05589         137 EGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEV-LTETSYTRAVDWWG---LGVLIYEMLVGESPFPGDD------E  206 (324)
T ss_pred             CCcEEeCcccCCccCCCCCCcccccccCccccCHhH-hcCCCCCcccchhh---HHHHHHHHHhCCCCCCCCC------H
Confidence            46789999998764            6889999998 44455678899999   7778888899887753210      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      ..... ....+..      ......+    ..+..+...|++.+|.+||++.+
T Consensus       207 ~~~~~-~i~~~~~------~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~  248 (324)
T cd05589         207 EEVFD-SIVNDEV------RYPRFLS----REAISIMRRLLRRNPERRLGSGE  248 (324)
T ss_pred             HHHHH-HHHhCCC------CCCCCCC----HHHHHHHHHHhhcCHhHcCCCCC
Confidence            11111 1111110      1111111    34567888999999999996443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.95  E-value=4.2e-10  Score=84.10  Aligned_cols=118  Identities=12%  Similarity=-0.008  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   +|+.+++..+|..+.......   ..
T Consensus       142 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~~f~~~~~~---~~  215 (293)
T cd07843         142 RGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWS---VGCIFAELLTKKPLFPGKSEI---DQ  215 (293)
T ss_pred             CCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHH---HHHHHHHHHhCCCCCCCCChH---HH
Confidence            46789999998874            5677999998443344578899999   888888888886554321100   00


Q ss_pred             hhh-----------hHHhhhC------CCeeeeccccccccccHH-HHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYK-----------TWKLWCE------GNVQELMDPVLKESFILE-EILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~-----------~~~~~~~------~~~~~~~d~~l~~~~~~~-~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...           .|..+..      ..........+...+... ....+.++...|++.+|++||++.|++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         216 LNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            000           0110000      000011111111111111 1234567888999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.95  E-value=2.6e-10  Score=83.39  Aligned_cols=105  Identities=19%  Similarity=0.098  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ ......+.++|+|+   ||+.+.+..+|..+....      ..
T Consensus       137 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~-~~~~~~~~~~Dv~s---lG~i~~~l~~g~~~~~~~------~~  206 (256)
T cd08221         137 AGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPEL-CQGVKYNFKSDIWA---LGCVLYELLTLKRTFDAT------NP  206 (256)
T ss_pred             CCCEEECcCcceEEcccccccccccCCCccccCHhh-cCCCCCCCcchhHH---HHHHHHHHHHCCCCCCCC------CH
Confidence            45789999998764            6789999998 33444567899999   777788888887654221      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ....... ..+.....         .......+..+...|++.+|.+||++.++++.
T Consensus       207 ~~~~~~~-~~~~~~~~---------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         207 LNLVVKI-VQGNYTPV---------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHH-HcCCCCCC---------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            1111111 11111111         01112346677889999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=1.1e-09  Score=81.71  Aligned_cols=106  Identities=10%  Similarity=-0.083  Sum_probs=67.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||+ +.....+.++|+|+   +|+.+.+.++|..+....-..   ...
T Consensus       138 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Diws---~G~~l~el~~g~~pf~~~~~~---~~~  210 (285)
T cd05605         138 YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEV-VKNERYTFSPDWWG---LGCLIYEMIEGKSPFRQRKEK---VKR  210 (285)
T ss_pred             CCCEEEeeCCCceecCCCCccccccCCCCccCcHH-hcCCCCCccccchh---HHHHHHHHHHCCCCCCCCchh---hHH
Confidence            46789999998874           6789999998 44455677899999   777888888888765321111   111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVV  124 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~  124 (169)
                      ...........          ..++......+..+...|++.+|.+||     ++.++.
T Consensus       211 ~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~  259 (285)
T cd05605         211 EEVERRVKEDQ----------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVK  259 (285)
T ss_pred             HHHHHHhhhcc----------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHh
Confidence            11111111000          011111223466788999999999999     666764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.95  E-value=5.7e-10  Score=82.77  Aligned_cols=107  Identities=16%  Similarity=0.081  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccccc---ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNI---LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~---~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +.++||+|||+++.           ++..|+|||+..+.   ...+.++|+|+   ||+.+.+.++|..+......    
T Consensus       140 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~~~----  212 (283)
T cd06617         140 NGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWS---LGITMIELATGRFPYDSWKT----  212 (283)
T ss_pred             CCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchh---hHHHHHHHHhCCCCCCcccc----
Confidence            46789999998863           67789999973221   22357899999   88888899998877532110    


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. ....... .     -..+.+...   .....+..+...|++.+|.+||++.+++.
T Consensus       213 ~~-~~~~~~~-~-----~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         213 PF-QQLKQVV-E-----EPSPQLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CH-HHHHHHH-h-----cCCCCCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00 0011111 0     111111110   11134667888899999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.95  E-value=1.6e-10  Score=87.73  Aligned_cols=98  Identities=15%  Similarity=0.005  Sum_probs=64.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+++.+||..+....   ....+
T Consensus       137 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~elltg~~Pf~~~---~~~~~  209 (323)
T cd05616         137 EGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEI-IAYQPYGKSVDWWA---FGVLLYEMLAGQAPFEGE---DEDEL  209 (323)
T ss_pred             CCcEEEccCCCceecCCCCCccccCCCChhhcCHHH-hcCCCCCCccchhc---hhHHHHHHHhCCCCCCCC---CHHHH
Confidence            56799999998873            6889999998 44555678899999   777888889988775321   10011


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ..    .......      ..    +......+..+...|++.+|.+|++.
T Consensus       210 ~~----~i~~~~~------~~----p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         210 FQ----SIMEHNV------AY----PKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HH----HHHhCCC------CC----CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            11    1111110      01    11112345678889999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.95  E-value=1.5e-09  Score=81.45  Aligned_cols=106  Identities=12%  Similarity=0.008  Sum_probs=67.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||. +.....+.++|+|+   ||+.+.+.++|+.+.....      .
T Consensus       151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lGvil~~lltg~~pf~~~~------~  220 (296)
T cd06655         151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMVEGEPPYLNEN------P  220 (296)
T ss_pred             CCCEEEccCccchhcccccccCCCcCCCccccCcch-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC------H
Confidence            46789999998763            6678999998 44455677899999   7777888889887642211      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......... ........       +......+..+...|++.+|.+||++.+++.
T Consensus       221 ~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         221 LRALYLIAT-NGTPELQN-------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHh-cCCcccCC-------cccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            111111111 00000001       1111124556778999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.94  E-value=1.2e-09  Score=82.03  Aligned_cols=106  Identities=12%  Similarity=0.028  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+.+|+|||+ ......+.++|+|+   ||+.+++..+|..+....   .   .
T Consensus       153 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~~g~~p~~~~---~---~  222 (297)
T cd06659         153 DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEV-ISRTPYGTEVDIWS---LGIMVIEMVDGEPPYFSD---S---P  222 (297)
T ss_pred             CCcEEEeechhHhhcccccccccceecCccccCHHH-HccCCCCchhhHHH---HHHHHHHHHhCCCCCCCC---C---H
Confidence            56789999998753            6789999998 44455678899999   888888989988764321   1   1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..... ......     .+....  .......+..+...|++.+|.+||++.++++
T Consensus       223 ~~~~~-~~~~~~-----~~~~~~--~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         223 VQAMK-RLRDSP-----PPKLKN--AHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHHH-HHhccC-----CCCccc--cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            11111 111110     000000  0011123556778999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.94  E-value=2e-10  Score=83.92  Aligned_cols=106  Identities=15%  Similarity=0.053  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|++||+.......+.++|+|+   ||+.+.+.++|..+.....      ..
T Consensus       138 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~s---lG~~l~~l~~g~~pf~~~~------~~  208 (258)
T cd06632         138 NGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWS---LGCTVLEMATGKPPWSQLE------GV  208 (258)
T ss_pred             CCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHH---HHHHHHHHHhCCCCcccCc------HH
Confidence            56789999998764           6778999998332223678899999   8888888889887643211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............     .+...    .-..+.++..+|++.+|++||++.+++.
T Consensus       209 ~~~~~~~~~~~~~-----~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         209 AAVFKIGRSKELP-----PIPDH----LSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHhcccCC-----CcCCC----cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            1111111101110     11111    1134556778999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.94  E-value=1.2e-10  Score=88.39  Aligned_cols=99  Identities=11%  Similarity=-0.073  Sum_probs=63.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+.+.++|..+....      ..
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~ell~g~~pf~~~------~~  201 (323)
T cd05575         132 QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEV-LRKQPYDRTVDWWC---LGAVLYEMLYGLPPFYSR------DT  201 (323)
T ss_pred             CCcEEEeccCCCcccccCCCccccccCChhhcChhh-hcCCCCCccccccc---cchhhhhhhcCCCCCCCC------CH
Confidence            56789999998864            7889999998 44455678899999   677788888888764321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      ........ .+.      ..+....    ...+.++...|++.+|.+||++.
T Consensus       202 ~~~~~~i~-~~~------~~~~~~~----~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         202 AEMYDNIL-NKP------LRLKPNI----SVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHHH-cCC------CCCCCCC----CHHHHHHHHHHhhcCHHhCCCCC
Confidence            11111111 111      0111111    23456777899999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.94  E-value=2e-10  Score=83.78  Aligned_cols=107  Identities=21%  Similarity=0.067  Sum_probs=67.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             ++..|++||. ......+.++|+|+   +|+.+.+..+++.+....  .   .
T Consensus       139 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~-~~~~~~~~~~Di~s---lG~i~~~l~~~g~~p~~~--~---~  209 (258)
T smart00219      139 NLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPES-LKDGKFTSKSDVWS---FGVLLWEIFTLGESPYPG--M---S  209 (258)
T ss_pred             CCeEEEcccCCceecccccccccccCCCcccccChHH-hccCCCCcchhHHH---HHHHHHHHHhCCCCCCCC--C---C
Confidence            34689999999864             3468999998 44556778999999   777788888743332111  1   0


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ... .......+....     ...    .....+.++..+|++.+|.+||++.++++.|
T Consensus       210 ~~~-~~~~~~~~~~~~-----~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      210 NEE-VLEYLKKGYRLP-----KPE----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHH-HHHHHhcCCCCC-----CCC----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            111 111111111100     001    1223567788999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=98.94  E-value=6.5e-10  Score=89.09  Aligned_cols=105  Identities=12%  Similarity=0.001  Sum_probs=72.1

Q ss_pred             cceeeeeEeecC-----------C--CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcch
Q 041157            4 KQKVLQFLRSGE-----------G--RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGP   69 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------g--t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~l   69 (169)
                      -+|++||||||-           |  ...|||||- .+...-+..+|||-   ||+.+.|+.. |..+.           
T Consensus       529 CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPES-INfRrFTtASDVWM---FgVCmWEIl~lGvkPf-----------  593 (974)
T KOG4257|consen  529 CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPES-INFRRFTTASDVWM---FGVCMWEILSLGVKPF-----------  593 (974)
T ss_pred             eeeecccchhhhccccchhhccccccceeecCccc-cchhcccchhhHHH---HHHHHHHHHHhcCCcc-----------
Confidence            469999999996           2  357999998 66777889999999   6666655443 22221           


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                       .|+    ....+.-.+...-+-..+.+|.-.+..+..+||..+|.+||...++...|+
T Consensus       594 -qgv----kNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ls  647 (974)
T KOG4257|consen  594 -QGV----KNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS  647 (974)
T ss_pred             -ccc----cccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence             011    122222223322233346677788899999999999999999999876664

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.94  E-value=2.1e-10  Score=87.08  Aligned_cols=103  Identities=12%  Similarity=-0.000  Sum_probs=66.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.+||+.+....-      .
T Consensus       132 ~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~tg~~Pf~~~~------~  201 (321)
T cd05591         132 EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEI-LQELEYGPSVDWWA---LGVLMYEMMAGQPPFEADN------E  201 (321)
T ss_pred             CCCEEEeecccceecccCCccccccccCccccCHHH-HcCCCCCCccceec---hhHHHHHHhcCCCCCCCCC------H
Confidence            56789999998863            7889999998 44455677899999   7777888889887653211      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-------CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-------TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-------~m~~V~~  125 (169)
                      ..... ....+.   ..-+.   ..+    ..+..+...|++.+|.+||       ++.++.+
T Consensus       202 ~~~~~-~i~~~~---~~~p~---~~~----~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         202 DDLFE-SILHDD---VLYPV---WLS----KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHH-HHHcCC---CCCCC---CCC----HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            11111 111111   11111   011    2456677889999999999       6777653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.94  E-value=2.4e-09  Score=79.96  Aligned_cols=107  Identities=13%  Similarity=0.081  Sum_probs=66.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            ++..|+|||+...    ....+.++|+|+   ||+.+++.++|..+....    
T Consensus       146 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s---lG~il~el~~g~~p~~~~----  218 (292)
T cd06644         146 DGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS---LGITLIEMAQIEPPHHEL----  218 (292)
T ss_pred             CCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHh---HHHHHHHHhcCCCCCccc----
Confidence            45789999998764            5678999998321    223356799999   777788888888764221    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ....... ......     .+.+..  +......+..+...|++.+|++||++.++++
T Consensus       219 --~~~~~~~-~~~~~~-----~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         219 --NPMRVLL-KIAKSE-----PPTLSQ--PSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             --cHHHHHH-HHhcCC-----CccCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence              1111111 111111     111100  1111234567888999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.93  E-value=3.3e-10  Score=85.31  Aligned_cols=55  Identities=5%  Similarity=-0.226  Sum_probs=42.4

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.               ++..|+|||+..+....+.++|+|+   ||+.+.+..+|..+..
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~~l~~l~~~~~~~~  217 (316)
T cd07842         148 RGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWA---IGCIFAELLTLEPIFK  217 (316)
T ss_pred             cceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHH---HHHHHHHHHhcCCCCc
Confidence            56789999998774               3567999997443344577899999   8888888889876654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.93  E-value=2.7e-10  Score=85.50  Aligned_cols=54  Identities=7%  Similarity=-0.198  Sum_probs=40.2

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.                ++..|+|||+..+....+.++|+|+   ||+.+.+..||..+.
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~~l~el~t~~~~~  224 (310)
T cd07865         155 DGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWG---AGCIMAEMWTRSPIM  224 (310)
T ss_pred             CCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHH---HHHHHHHHHhCCCCC
Confidence            46789999998863                3467999998443334467899999   777788888876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.93  E-value=1.6e-10  Score=88.23  Aligned_cols=118  Identities=10%  Similarity=-0.061  Sum_probs=68.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||...+....+.++|+|+   ||+.+.+..+|..+....-..   ..
T Consensus       144 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~~~~---~~  217 (337)
T cd07858         144 NCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWS---VGCIFAELLGRKPLFPGKDYV---HQ  217 (337)
T ss_pred             CCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHH---HHHHHHHHHcCCCCCCCCChH---HH
Confidence            45789999999874            5667999997343344678899999   777777777877553211000   00


Q ss_pred             hhhhHHhh-----------hCCCeeeec-------cccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLW-----------CEGNVQELM-------DPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~-----------~~~~~~~~~-------d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ........           ......+.+       ++.+... .......+.++..+|++.+|.+||++.++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         218 LKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARL-FPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHH-cccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            00000000           000000000       0000000 01123456788999999999999999999863

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.93  E-value=1.7e-09  Score=80.28  Aligned_cols=117  Identities=9%  Similarity=-0.072  Sum_probs=66.3

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ++..|++||+. .....+.++|+|+   ||+.+.+..+|..+...   .......
T Consensus       143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~-~~~~~~~~~Di~s---~G~~l~~l~~~~~~~~~---~~~~~~~  215 (287)
T cd07838         143 DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVL-LQSSYATPVDMWS---VGCIFAELFRRRPLFRG---TSEADQL  215 (287)
T ss_pred             CCCEEEeccCcceeccCCcccccccccccccChHHh-ccCCCCCcchhhh---HHHHHHHHHhCCCcccC---CChHHHH
Confidence            46789999998865           56679999983 3445677899999   77777788887543221   1100001


Q ss_pred             hhhHHhhhC-CCe---------eeeccccccc---cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCE-GNV---------QELMDPVLKE---SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~-~~~---------~~~~d~~l~~---~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......... ...         ..........   .........+.++...|++.+|.+||++.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         216 DKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            000000000 000         0000000000   001122245667888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.93  E-value=1.4e-09  Score=80.89  Aligned_cols=108  Identities=15%  Similarity=0.155  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCccccc-----ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNI-----LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~-----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.          ++.+|+|||...+.     ...+.++|+|+   ||+.+.+..+|..+.......  
T Consensus       139 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~~~~--  213 (286)
T cd06622         139 NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWS---LGLSILEMALGRYPYPPETYA--  213 (286)
T ss_pred             CCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHh---HHHHHHHHHhCCCCCCCcchh--
Confidence            45689999998864          67789999983211     12367899999   787888889998875321100  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        -..........+.     .+.+.    ......+..+...|++.+|++||++.+++.
T Consensus       214 --~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         214 --NIFAQLSAIVDGD-----PPTLP----SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             --hHHHHHHHHhhcC-----CCCCC----cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence              0000000000110     11111    112234567788999999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.93  E-value=2.3e-10  Score=84.19  Aligned_cols=106  Identities=17%  Similarity=0.125  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +..+||+|||+++.                  |+..|+|||+ ......+.++|+|+   +|+.+++.++|..+....- 
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~s---lG~~~~~l~~g~~p~~~~~-  212 (265)
T cd06631         138 NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV-INESGYGRKSDIWS---IGCTVFEMATGKPPLASMD-  212 (265)
T ss_pred             CCeEEeccchhhHhhhhccccccccccccccCCCccccChhh-hcCCCCcchhhHHH---HHHHHHHHHhCCCccccCC-
Confidence            45789999998753                  5678999998 44455678899999   8888889999887653210 


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .    ...    ....... ....+.+...++    ..+..+...|++.+|.+||++.+++.
T Consensus       213 ~----~~~----~~~~~~~-~~~~~~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         213 R----LAA----MFYIGAH-RGLMPRLPDSFS----AAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             h----HHH----HHHhhhc-cCCCCCCCCCCC----HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0    000    0000000 001112212122    34567788999999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.93  E-value=2.1e-10  Score=87.11  Aligned_cols=98  Identities=11%  Similarity=0.008  Sum_probs=64.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+.+.++|+.+....-      .
T Consensus       132 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~Pf~~~~------~  201 (320)
T cd05590         132 EGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEI-LQEMLYGPSVDWWA---MGVLLYEMLCGHAPFEAEN------E  201 (320)
T ss_pred             CCcEEEeeCCCCeecCcCCCcccccccCccccCHHH-HcCCCCCCccchhh---hHHHHHHHhhCCCCCCCCC------H
Confidence            46789999998763            7889999998 44455577899999   7878888899887753210      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      .. .......+.   ...+   ...+    ..+.++...|++.+|.+||+.
T Consensus       202 ~~-~~~~i~~~~---~~~~---~~~~----~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         202 DD-LFEAILNDE---VVYP---TWLS----QDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HH-HHHHHhcCC---CCCC---CCCC----HHHHHHHHHHcccCHHHCCCC
Confidence            11 111111111   1111   1111    235667789999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.93  E-value=1.2e-09  Score=84.03  Aligned_cols=53  Identities=8%  Similarity=-0.143  Sum_probs=42.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.           ++..|+|||. +.....+.++|+|+   +|+.+.+.++|+.+.
T Consensus       154 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~~l~~l~~g~~pf  217 (353)
T cd07850         154 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDIWS---VGCIMGEMIRGTVLF  217 (353)
T ss_pred             CCCEEEccCccceeCCCCCCCCCCcccccccCHHH-HhCCCCCCchhhHh---HHHHHHHHHHCCCCC
Confidence            56789999999874           5678999998 43455678899999   777788888887654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.92  E-value=6.7e-10  Score=84.23  Aligned_cols=103  Identities=11%  Similarity=-0.045  Sum_probs=67.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ +.....+.++|+|+   ||+.+.+.++|..+....-      .
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Diws---lGvil~~l~~G~~pf~~~~------~  201 (318)
T cd05570         132 EGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEI-LSYQPYGPAVDWWA---LGVLLYEMLAGQSPFEGDD------E  201 (318)
T ss_pred             CCcEEecccCCCeecCcCCCcccceecCccccCHHH-hcCCCCCcchhhhh---HHHHHHHHhhCCCCCCCCC------H
Confidence            56789999998763            6889999998 44455678899999   7777888889887653211      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH-----HHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM-----SSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m-----~~V~~  125 (169)
                      .. .........   .   ....    .....+..+...|++.+|.+||+.     .++..
T Consensus       202 ~~-~~~~i~~~~---~---~~~~----~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         202 DE-LFQSILEDE---V---RYPR----WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HH-HHHHHHcCC---C---CCCC----cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            11 111111111   0   0111    112345678889999999999999     77754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.92  E-value=8.1e-10  Score=83.15  Aligned_cols=110  Identities=11%  Similarity=-0.078  Sum_probs=71.1

Q ss_pred             cccceeeeeEeecC---------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh
Q 041157            2 NAKQKVLQFLRSGE---------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR   54 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~   54 (169)
                      +..+||+|||+++.                           ++.+|+|||+ ......+.++|+|+   ||+.+++.++|
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~vl~el~~g  212 (305)
T cd05609         137 MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEV-ILRQGYGKPVDWWA---MGIILYEFLVG  212 (305)
T ss_pred             CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchh-ccCCCCCchhhHHH---HHHHHHHHHhC
Confidence            45789999998862                           4668999998 33455678899999   88888899998


Q ss_pred             CCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           55 NFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        55 ~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+...   ..   .-.+. .....+   ....+....    .....+..+..+|++.+|.+||+..++.+.|+.
T Consensus       213 ~~pf~~---~~---~~~~~-~~~~~~---~~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         213 CVPFFG---DT---PEELF-GQVISD---DIEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             CCCCCC---CC---HHHHH-HHHHhc---ccCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            876421   10   11111 111111   111111111    112345678889999999999998888887765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.92  E-value=5.1e-10  Score=84.46  Aligned_cols=107  Identities=17%  Similarity=0.037  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..        ++..|+|||+..+  ....+.++|+|+   ||+.+.+..+|..+.....      ...
T Consensus       151 ~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~~------~~~  221 (308)
T cd06634         151 PGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNMN------AMS  221 (308)
T ss_pred             CCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHH---HHHHHHHHHcCCCCCcccc------HHH
Confidence            45789999998874        6789999998332  234567899999   7777888888886642210      000


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ... ....+..     +....   ......+..+...|++.+|.+||++.+|+..
T Consensus       222 ~~~-~~~~~~~-----~~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         222 ALY-HIAQNES-----PALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHH-HHhhcCC-----CCcCc---ccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            111 1111111     11111   1112345677889999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.92  E-value=6.4e-10  Score=81.58  Aligned_cols=107  Identities=16%  Similarity=0.101  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCccccccc---CCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILR---GNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~---~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||++..                ++..|++||+ .....   .+.++|+|+   ||+.+++..+|..+.....
T Consensus       135 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~~~~Dv~s---~G~il~~l~~g~~pf~~~~  210 (264)
T cd06626         135 NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV-ITGGKGKGHGRAADIWS---LGCVVLEMATGKRPWSELD  210 (264)
T ss_pred             CCCEEEcccccccccCCCCCcccccccCCcCCcCccChhh-ccCCCCCCCCcccchHH---HHHHHHHHHhCCCCccCCc
Confidence            45789999998764                4568999998 33333   678899999   8888888889887653211


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .  .     +.. .+...   ....+.+...  ......+..+...|++.+|.+||++.+++.
T Consensus       211 ~--~-----~~~-~~~~~---~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         211 N--E-----FQI-MFHVG---AGHKPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             c--h-----HHH-HHHHh---cCCCCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0  0     111 00000   0011111110  111233456778999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.92  E-value=7.5e-10  Score=81.53  Aligned_cols=109  Identities=17%  Similarity=0.089  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||++..            |+..|+|||+..  .....+.++|+|+   +|+.+++..++..+.......   
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwS---lG~il~~l~~~~~p~~~~~~~---  215 (267)
T cd06645         142 NGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWA---VGITAIELAELQPPMFDLHPM---  215 (267)
T ss_pred             CCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHH---HHHHHHHHhcCCCCcccccch---
Confidence            45689999998763            788999999832  1234567899999   788888888887664221110   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         .... ......   ...+.+....  .....+.++...|++.+|++||++.++++
T Consensus       216 ---~~~~-~~~~~~---~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         216 ---RALF-LMTKSN---FQPPKLKDKM--KWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ---hhHH-hhhccC---CCCCcccccC--CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence               0000 000111   0011111100  01124567888999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.92  E-value=6.3e-10  Score=83.66  Aligned_cols=55  Identities=4%  Similarity=-0.185  Sum_probs=42.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.            |+..|+|||...+....+.++|+|+   +|+.+.+.+||..+..
T Consensus       139 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~  205 (303)
T cd07869         139 TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWG---VGCIFVEMIQGVAAFP  205 (303)
T ss_pred             CCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCC
Confidence            46789999998863            5778999997333344567899999   8888888899887653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.92  E-value=1e-09  Score=80.47  Aligned_cols=108  Identities=16%  Similarity=0.060  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+ ......+.++|+|+   ||+.+++.+||..+.......   ..
T Consensus       136 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dv~s---lG~il~~l~tg~~p~~~~~~~---~~  208 (264)
T cd06623         136 KGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPER-IQGESYSYAADIWS---LGLTLLECALGKFPFLPPGQP---SF  208 (264)
T ss_pred             CCCEEEccCccceecccCCCcccceeecccccCHhh-hCCCCCCchhhHHH---HHHHHHHHHhCCCCCcccccc---CH
Confidence            46789999998774            5678999998 44556778899999   888888999988775332110   11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........ .     ...+.+...   .....+..+...|++.+|++||++.++++
T Consensus       209 ~~~~~~~~-~-----~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         209 FELMQAIC-D-----GPPPSLPAE---EFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HHHHHHHh-c-----CCCCCCCcc---cCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            11111011 0     111111111   02245677888899999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.92  E-value=2.1e-09  Score=80.16  Aligned_cols=54  Identities=7%  Similarity=-0.170  Sum_probs=41.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +.++||+|||+++.            ++..|+|||+..+....+.++|+|+   +|+.+++..+|..+.
T Consensus       139 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~s---lG~il~~l~~g~~~~  204 (291)
T cd07844         139 RGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWG---VGCIFYEMATGRPLF  204 (291)
T ss_pred             CCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHH---HHHHHHHHHhCCCCC
Confidence            46789999998864            4567999998443344577899999   788888888887554

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.92  E-value=6.5e-10  Score=82.58  Aligned_cols=54  Identities=9%  Similarity=-0.141  Sum_probs=41.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+++.+||+.+.
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~il~~l~tg~~p~  201 (284)
T cd07860         136 EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWS---LGCIFAEMVTRRALF  201 (284)
T ss_pred             CCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHH---HHHHHHHHHHCCCCC
Confidence            56799999998764            4678999997333333467899999   888889999988654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.92  E-value=1e-09  Score=83.22  Aligned_cols=102  Identities=13%  Similarity=0.032  Sum_probs=65.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   +|+.+++.++|..+....   .   .
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~el~~g~~Pf~~~---~---~  201 (316)
T cd05620         132 DGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI-LQGLKYTFSVDWWS---FGVLLYEMLIGQSPFHGD---D---E  201 (316)
T ss_pred             CCCEEeCccCCCeecccCCCceeccCCCcCccCHHH-HcCCCCCcccchhh---hHHHHHHHHhCCCCCCCC---C---H
Confidence            46789999998763            7899999998 43445677899999   888888889988775321   1   0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH-HHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS-SVV  124 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~-~V~  124 (169)
                       .........+      .+.+.....    ..+..+...|++.+|.+||++. ++.
T Consensus       202 -~~~~~~~~~~------~~~~~~~~~----~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         202 -DELFESIRVD------TPHYPRWIT----KESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             -HHHHHHHHhC------CCCCCCCCC----HHHHHHHHHHccCCHHHcCCChHHHH
Confidence             0111111111      111111111    2345677799999999999985 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.91  E-value=1.8e-09  Score=80.96  Aligned_cols=106  Identities=13%  Similarity=0.015  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            |+..|++||+ +.....+.++|+|+   ||+.+++..+|..+....-..   ..
T Consensus       151 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~s---lG~ll~~ll~g~~pf~~~~~~---~~  223 (293)
T cd06647         151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMVEGEPPYLNENPL---RA  223 (293)
T ss_pred             CCCEEEccCcceecccccccccccccCChhhcCchh-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCChh---hh
Confidence            45789999998753            5677999998 43455677899999   777888888988764321110   00


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +..   ....+.      +...  ........+..+...|++.+|.+||++.+++.
T Consensus       224 ~~~---~~~~~~------~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         224 LYL---IATNGT------PELQ--NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             eee---hhcCCC------CCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000   000000      0000  01111224556778999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.91  E-value=2.3e-10  Score=85.90  Aligned_cols=118  Identities=6%  Similarity=-0.095  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||...+....+.++|+|+   +|+.+.+.+||+.+....-..   ..
T Consensus       140 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s---lG~~l~el~tg~~~f~~~~~~---~~  213 (301)
T cd07873         140 RGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWG---VGCIFYEMSTGRPLFPGSTVE---EQ  213 (301)
T ss_pred             CCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHH---HHHHHHHHHhCCCCCCCCCHH---HH
Confidence            46789999998864            4678999998444444567899999   888888889987554221100   01


Q ss_pred             hhhhHHh-----------h-hCCCeeeeccccccccc----cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKL-----------W-CEGNVQELMDPVLKESF----ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~-----------~-~~~~~~~~~d~~l~~~~----~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......           + ........-.+......    .......+..+...|++.+|.+||++.+|++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         214 LHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            1111000           0 00000000001000000    0011123567888999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.91  E-value=1.3e-09  Score=81.32  Aligned_cols=103  Identities=11%  Similarity=-0.009  Sum_probs=64.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||+ ......+.++|+|+   ||+.+++.+||..+.......   ...
T Consensus       138 ~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~P~~~~~~~---~~~  210 (285)
T cd05632         138 YGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEV-LNNQRYTLSPDYWG---LGCLIYEMIEGQSPFRGRKEK---VKR  210 (285)
T ss_pred             CCCEEEecCCcceecCCCCcccCCCCCcCccChHH-hcCCCCCcccchHH---HHHHHHHHHhCCCCCCCCCHH---HHH
Confidence            46789999998853           6889999999 44455678899999   788888888988765321100   001


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      ..........      ........    ...+.++...|++.+|.+||++.
T Consensus       211 ~~~~~~~~~~------~~~~~~~~----~~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         211 EEVDRRVLET------EEVYSAKF----SEEAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             HHHHHhhhcc------ccccCccC----CHHHHHHHHHHccCCHhHcCCCc
Confidence            1111111000      00111111    12356778899999999999944

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=7.7e-10  Score=82.83  Aligned_cols=103  Identities=12%  Similarity=-0.008  Sum_probs=66.8

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         |+..|+|||. +.....+.++|+|+   +|+.+.+.+||..+....   .   ... 
T Consensus       137 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~~l~~g~~pf~~~---~---~~~-  205 (291)
T cd05612         137 EGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEV-IQSKGHNKAVDWWA---LGILIYEMLVGYPPFFDD---N---PFG-  205 (291)
T ss_pred             CCCEEEEecCcchhccCCcccccCChhhcCHHH-HcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCC---C---HHH-
Confidence            46789999999874         7889999998 44445678899999   888888999988765321   1   111 


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      .......+..      .+....    -..+.++...|++.+|.+||+     ..++.+
T Consensus       206 ~~~~i~~~~~------~~~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         206 IYEKILAGKL------EFPRHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHHHhCCc------CCCccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            1111111110      111111    124567888999999999995     666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.91  E-value=8.3e-10  Score=81.77  Aligned_cols=118  Identities=8%  Similarity=-0.010  Sum_probs=69.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||.+..            ++..|++||...+....+.++|+|+   +|+.+.+.+||+.+....   .....
T Consensus       134 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~s---lG~~l~~l~tg~~~~~~~---~~~~~  207 (283)
T cd05118         134 EGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWS---VGCIFAELLSRRPLFPGK---SEIDQ  207 (283)
T ss_pred             CCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHH---HHHHHHHHHhCCCCCCCC---CHHHH
Confidence            46789999998864            4567999998443336678899999   888888888987543211   11111


Q ss_pred             hhhhHHhhhCCC---eeeecc------cccc-------ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGN---VQELMD------PVLK-------ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~---~~~~~d------~~l~-------~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......+....   ...+.+      ....       .....+....+..+...|++.+|.+||++.+++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            111111100000   000000      0000       0001123346778999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.90  E-value=1.3e-10  Score=88.32  Aligned_cols=104  Identities=10%  Similarity=-0.078  Sum_probs=64.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       132 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~~G~~pf~~~------~~  201 (325)
T cd05604         132 QGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEV-IRKQPYDNTVDWWC---LGAVLYEMLYGLPPFYCR------DV  201 (325)
T ss_pred             CCCEEEeecCCcccCCCCCCCcccccCChhhCCHHH-HcCCCCCCcCcccc---ccceehhhhcCCCCCCCC------CH
Confidence            56789999998874            7889999998 44455567899999   666677777887664221      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      .. .......+..  .+.+    ...    ..+..+...|++.+|.+||++.+.+..
T Consensus       202 ~~-~~~~~~~~~~--~~~~----~~~----~~~~~ll~~ll~~~p~~R~~~~~~~~~  247 (325)
T cd05604         202 AE-MYDNILHKPL--VLRP----GAS----LTAWSILEELLEKDRQRRLGAKEDFLE  247 (325)
T ss_pred             HH-HHHHHHcCCc--cCCC----CCC----HHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence            11 1111111110  1111    111    235567788999999999988754433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.90  E-value=1.8e-09  Score=80.79  Aligned_cols=118  Identities=7%  Similarity=-0.073  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+++.++|......   ......
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~il~e~~~g~~~~~~---~~~~~~  211 (298)
T cd07841         138 DGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWS---VGCIFAELLLRVPFLPG---DSDIDQ  211 (298)
T ss_pred             CCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHH---HHHHHHHHHcCCccccC---CccHHH
Confidence            56789999999874            3457999998444445578899999   88888888888432211   111011


Q ss_pred             hhhhHHhhh--------C-CCeeeeccccccccc-----cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWC--------E-GNVQELMDPVLKESF-----ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~--------~-~~~~~~~d~~l~~~~-----~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......+.        . ...............     .......+.++...|++.+|++||++.+|+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            111100000        0 000000000000000     1122346778899999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.89  E-value=3.3e-10  Score=85.89  Aligned_cols=101  Identities=12%  Similarity=0.021  Sum_probs=65.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   ||+.+++.++|..+....-      .
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~~G~~pf~~~~------~  201 (316)
T cd05619         132 DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEI-LLGQKYNTSVDWWS---FGVLLYEMLIGQSPFHGHD------E  201 (316)
T ss_pred             CCCEEEccCCcceECCCCCCceeeecCCccccCHHH-HcCCCCCchhhhhh---HHHHHHHHHhCCCCCCCCC------H
Confidence            45789999998763            7889999998 43445678899999   8888888899887653210      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH-HH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS-SV  123 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~-~V  123 (169)
                      .. .......+      .+.......    ..+..+...|++.+|.+||++. ++
T Consensus       202 ~~-~~~~i~~~------~~~~~~~~~----~~~~~li~~~l~~~P~~R~~~~~~l  245 (316)
T cd05619         202 EE-LFQSIRMD------NPCYPRWLT----REAKDILVKLFVREPERRLGVKGDI  245 (316)
T ss_pred             HH-HHHHHHhC------CCCCCccCC----HHHHHHHHHHhccCHhhcCCChHHH
Confidence            00 11111111      111111111    2355677899999999999997 44

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.89  E-value=1.2e-09  Score=81.62  Aligned_cols=55  Identities=5%  Similarity=-0.195  Sum_probs=42.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +.++||+|||+++.            ++..|+|||+..+....+.++|+|+   +|+.+++++||..+..
T Consensus       139 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~~l~~l~~g~~~f~  205 (291)
T cd07870         139 LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWG---AGCIFIEMLQGQPAFP  205 (291)
T ss_pred             CCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHH---HHHHHHHHHhCCCCCC
Confidence            45789999998874            5778999998333334567899999   8888899999887643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.89  E-value=4.1e-10  Score=84.14  Aligned_cols=116  Identities=9%  Similarity=-0.029  Sum_probs=67.3

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ..+||+|||+++.            ++..|++||+..+....+.++|+|+   +|+.+++.+||..+.......   ...
T Consensus       140 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s---lG~i~~~l~tg~~pf~~~~~~---~~~  213 (294)
T PLN00009        140 NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWS---VGCIFAEMVNQKPLFPGDSEI---DEL  213 (294)
T ss_pred             CEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCHH---HHH
Confidence            4579999998864            4578999998443344577899999   888888889987654321110   111


Q ss_pred             hhhHHhhhCCC---------eee-------eccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGN---------VQE-------LMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~---------~~~-------~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......+....         +.+       .....+.. ........+.++..+|++.+|.+||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        214 FKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLAT-VVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHH-hCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11100000000         000       00000000 00111234677888999999999999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.89  E-value=1.4e-09  Score=88.56  Aligned_cols=115  Identities=9%  Similarity=-0.027  Sum_probs=64.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc-c--------------------cCCccccCCCCCCcCHH
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI-L--------------------RGNKKVESQELPLFPLD   47 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~-~--------------------~~~~~~dv~s~~~~~~~   47 (169)
                      +..+||+|||+++.             ++.+|+|||..... .                    ....+.|+|+   ||+.
T Consensus       292 ~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS---lGvi  368 (566)
T PLN03225        292 SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS---AGLI  368 (566)
T ss_pred             CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH---HHHH
Confidence            46799999999973             67899999942211 1                    1223569999   7778


Q ss_pred             HHHHHHhCCCCCCCC-------CCCCcchhhhhHHhhhCCCeeeecccccccccc--HHHHHHHHHHhhhhcCCCCCCCC
Q 041157           48 LIHEATRNFSNENKL-------GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFI--LEEILKRIHIGLLCVQEDPADRP  118 (169)
Q Consensus        48 ll~~~t~~~~~~~~~-------~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~--~~~~~~~~~ia~~C~~~~p~~RP  118 (169)
                      +++.+++.++.....       ...+..+..|.....      ....+.+...+.  ........++...|++.+|.+||
T Consensus       369 L~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~  442 (566)
T PLN03225        369 FLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVE------PRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI  442 (566)
T ss_pred             HHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhc------cccchhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence            888888776543211       001111122211000      000000000000  00011344688899999999999


Q ss_pred             CHHHHHH
Q 041157          119 TMSSVVV  125 (169)
Q Consensus       119 ~m~~V~~  125 (169)
                      ++.++++
T Consensus       443 ta~e~L~  449 (566)
T PLN03225        443 SAKAALA  449 (566)
T ss_pred             CHHHHhC
Confidence            9999986

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.89  E-value=3.7e-10  Score=82.49  Aligned_cols=103  Identities=17%  Similarity=0.115  Sum_probs=67.1

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ...||+|||.+..            |+..|+|||+ ......+.++|+|+   ||+.+++..+|..+....      ...
T Consensus       139 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~------~~~  208 (257)
T cd08225         139 MVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEI-CQNRPYNNKTDIWS---LGCVLYELCTLKHPFEGN------NLH  208 (257)
T ss_pred             CeEEecccccchhccCCcccccccCCCccccCHHH-HcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCc------cHH
Confidence            3569999998763            6778999998 43455678899999   777888888888764321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .+..... .+.    +.+. .....    ..+.++..+|++.+|++||++.+++.
T Consensus       209 ~~~~~~~-~~~----~~~~-~~~~~----~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         209 QLVLKIC-QGY----FAPI-SPNFS----RDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHh-ccc----CCCC-CCCCC----HHHHHHHHHHhccChhhCcCHHHHhh
Confidence            2222111 111    1111 11111    24667778999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.89  E-value=2.9e-09  Score=77.47  Aligned_cols=106  Identities=15%  Similarity=0.101  Sum_probs=68.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||.+..              ++..|++||+ ......+.++|+|+   ||+.+++.++|..+.....     
T Consensus       137 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~-----  207 (260)
T cd06606         137 DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEV-IRGEEYGRAADIWS---LGCTVIEMATGKPPWSELG-----  207 (260)
T ss_pred             CCCEEEcccccEEecccccccccccCCCCCccccCHhh-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC-----
Confidence            46789999997774              4568999998 44555788999999   8888888889877653211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......+........     +.+    +......+.++..+|++.+|++||++.+++.
T Consensus       208 ~~~~~~~~~~~~~~~-----~~~----~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         208 NPMAALYKIGSSGEP-----PEI----PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             chHHHHHhccccCCC-----cCC----CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            111111111100000     011    1111345677788999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.89  E-value=1.8e-09  Score=80.09  Aligned_cols=118  Identities=8%  Similarity=-0.003  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             |+..|+|||+..+....+.++|+|+   +|+.+.+.+||......   .....
T Consensus       135 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~tg~~~~~~---~~~~~  208 (286)
T cd07832         135 DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWA---VGCIFAELLNGSPLFPG---ENDIE  208 (286)
T ss_pred             CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHH---HHHHHHHHHcCCcCcCC---CCHHH
Confidence            45689999998774             4668999998444444578899999   88888888888433211   11111


Q ss_pred             hhhhhHHhhhCC------------Ceeeeccccccc----cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEG------------NVQELMDPVLKE----SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~------------~~~~~~d~~l~~----~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...+....+...            ....+..+.-..    ....+....+..+..+|++.+|.+||++.+++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         209 QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            111111111000            000010000000    000112256778889999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.89  E-value=5.9e-10  Score=81.31  Aligned_cols=104  Identities=13%  Similarity=-0.083  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+|++|||+++.          ++..|++||+ ......+.++|+|+   +|+.+++..+|+.+....      ....
T Consensus       139 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~D~~s---lG~~~~~l~~g~~p~~~~------~~~~  208 (256)
T cd08530         139 NDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEV-WKGRPYSYKSDIWS---LGCLLYEMATFAPPFEAR------SMQD  208 (256)
T ss_pred             CCcEEEeeccchhhhccCCcccccCCccccCHHH-HCCCCCCchhhHHH---HHHHHHHHHhCCCCCCCC------CHHH
Confidence            35689999998864          6789999998 43455667899999   777788888887654221      1100


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+....     +    .......+..+...|++.+|++||++.++++
T Consensus       209 -~~~~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         209 -LRYKVQRGKYPP-----I----PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             -HHHHHhcCCCCC-----C----chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             011111111111     1    1122345778888999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.89  E-value=6.6e-10  Score=82.72  Aligned_cols=106  Identities=13%  Similarity=0.071  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||++..            ++.+|++||+ ......+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       152 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Dv~s---lGvil~~l~~g~~p~~~~------~~  221 (286)
T cd06614         152 DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV-IKRKDYGPKVDIWS---LGIMCIEMAEGEPPYLRE------PP  221 (286)
T ss_pred             CCCEEECccchhhhhccchhhhccccCCcccCCHhH-hcCCCCCCccccHH---HHHHHHHHHhCCCCCCCC------CH
Confidence            45789999997653            5678999998 43445678899999   888888999988764321      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........ ........+       .......+..+...|++.+|..||++.+|+.
T Consensus       222 ~~~~~~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         222 LRALFLIT-TKGIPPLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHH-hcCCCCCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            11111111 111101111       1112234667888999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.89  E-value=8.7e-10  Score=81.15  Aligned_cols=104  Identities=12%  Similarity=-0.034  Sum_probs=63.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               |+..|+|||. ......+.++|+|+   ||+.+.+.++|+.+....     
T Consensus       142 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~~g~~p~~~~-----  212 (265)
T cd06652         142 VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEV-ISGEGYGRKADIWS---VGCTVVEMLTEKPPWAEF-----  212 (265)
T ss_pred             CCCEEECcCccccccccccccccccccCCCCccccChhh-hcCCCCCcchhHHH---HHHHHHHHhhCCCCCCcc-----
Confidence            46789999998863               6778999998 43445678899999   888888888988764321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ...........     ....+.+    +......+..+...|+. +|..||++.+|++
T Consensus       213 -~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         213 -EAMAAIFKIAT-----QPTNPVL----PPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             -chHHHHHHHhc-----CCCCCCC----chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence             00000111100     0011111    11222334445556664 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.89  E-value=1.5e-09  Score=87.32  Aligned_cols=53  Identities=11%  Similarity=0.014  Sum_probs=42.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.             ||..|+|||+ +.....+.++|+|+   ||+.+++.+++.+..
T Consensus       303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~ell~~~~~p  368 (501)
T PHA03210        303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEI-LAGDGYCEITDIWS---CGLILLDMLSHDFCP  368 (501)
T ss_pred             CCCEEEEeCCCceecCcccccccccccCCcCCCCchh-hcCCCCCcHHHHHH---HHHHHHHHHHCCCCC
Confidence            46789999999863             7899999998 43445678899999   888888888887643

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.88  E-value=4.7e-10  Score=85.27  Aligned_cols=98  Identities=15%  Similarity=0.049  Sum_probs=63.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   +|+.+.+.+||..+....   .   .
T Consensus       137 ~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~elltG~~pf~~~---~---~  206 (324)
T cd05587         137 EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEI-IAYQPYGKSVDWWA---FGVLLYEMLAGQPPFDGE---D---E  206 (324)
T ss_pred             CCCEEEeecCcceecCCCCCceeeecCCccccChhh-hcCCCCCcccchhh---hHHHHHHHHhCCCCCCCC---C---H
Confidence            46789999998763            7899999998 43445577899999   888888999988765321   0   0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      .. .........      ..+....+    ..+..+...|++.+|.+|++.
T Consensus       207 ~~-~~~~i~~~~------~~~~~~~~----~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         207 DE-LFQSIMEHN------VSYPKSLS----KEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HH-HHHHHHcCC------CCCCCCCC----HHHHHHHHHHhhcCHHHcCCC
Confidence            00 011111111      01111112    245677789999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.88  E-value=2.4e-10  Score=86.88  Aligned_cols=104  Identities=10%  Similarity=-0.077  Sum_probs=66.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   +|+.+.+.++|..+....   .   .
T Consensus       132 ~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~---~---~  201 (325)
T cd05602         132 QGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWC---LGAVLYEMLYGLPPFYSR---N---T  201 (325)
T ss_pred             CCCEEEccCCCCcccccCCCCcccccCCccccCHHH-HcCCCCCCcccccc---ccHHHHHHhcCCCCCCCC---C---H
Confidence            46789999998863            7889999998 44455667899999   777788888888765321   0   1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ......... ...  -+.+.    .+    ..+.++...|++.+|.+||+..+.+..
T Consensus       202 ~~~~~~i~~-~~~--~~~~~----~~----~~~~~li~~~l~~~p~~R~~~~~~~~~  247 (325)
T cd05602         202 AEMYDNILN-KPL--QLKPN----IT----NSARHLLEGLLQKDRTKRLGAKDDFME  247 (325)
T ss_pred             HHHHHHHHh-CCc--CCCCC----CC----HHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence            111111111 100  01111    11    235567778999999999998754433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.88  E-value=2.6e-09  Score=79.69  Aligned_cols=106  Identities=16%  Similarity=0.092  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   ||+.+.+.++|..+...   .   ..
T Consensus       151 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lGv~l~ell~g~~p~~~---~---~~  220 (285)
T cd06648         151 DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEV-ISRLPYGTEVDIWS---LGIMVIEMVDGEPPYFN---E---PP  220 (285)
T ss_pred             CCcEEEcccccchhhccCCcccccccCCccccCHHH-hcCCCCCCcccHHH---HHHHHHHHHhCCCCCcC---C---CH
Confidence            56789999997753            6788999998 44445678899999   78888888898876422   1   11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...... ...+     ..+.+...  ......+..+..+|++.+|++||++.++++
T Consensus       221 ~~~~~~-~~~~-----~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         221 LQAMKR-IRDN-----LPPKLKNL--HKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHH-HHhc-----CCCCCccc--ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            111111 1111     11111110  111235677888999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.88  E-value=6.5e-10  Score=82.73  Aligned_cols=107  Identities=7%  Similarity=-0.021  Sum_probs=66.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||+ +.....+.++|+|+   ||+.+++.++|+.+.......   ..
T Consensus       133 ~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~~g~~pf~~~~~~---~~  205 (280)
T cd05608         133 DGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPEL-LQGEEYDFSVDYFA---LGVTLYEMIAARGPFRARGEK---VE  205 (280)
T ss_pred             CCCEEEeeCccceecCCCCccccccCCCcCccCHHH-hcCCCCCccccHHH---HHHHHHHHHhCCCCCCCCCcc---hh
Confidence            45689999999863            6789999998 43455667899999   888888999988765321110   00


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......        .++....  ..+......+.++...|++.+|.+||     ++.++..
T Consensus       206 ~~~~~~--------~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         206 NKELKQ--------RILNDSV--TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHH--------hhcccCC--CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            000000        0111111  01111223456777899999999999     5566653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.88  E-value=3e-10  Score=85.67  Aligned_cols=54  Identities=6%  Similarity=-0.154  Sum_probs=43.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.            ++..|+|||...+....+.++|+|+   +|+.+++.+||+.+.
T Consensus       140 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~tg~~pf  205 (309)
T cd07872         140 RGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWG---VGCIFFEMASGRPLF  205 (309)
T ss_pred             CCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHH---HHHHHHHHHhCCCCC
Confidence            45789999999864            5778999998444445678899999   888899999988654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.88  E-value=4.6e-10  Score=81.36  Aligned_cols=106  Identities=16%  Similarity=0.112  Sum_probs=68.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||.+..           ++..|++||+ ......+.++|+|+   ||+.+++.++|..+....-      ..
T Consensus       134 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~------~~  203 (253)
T cd05122         134 DGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEV-INGKPYDYKADIWS---LGITAIELAEGKPPYSELP------PM  203 (253)
T ss_pred             CCeEEEeeccccccccccccccceecCCcccCHHH-HcCCCCCccccHHH---HHHHHHHHHhCCCCCCCCc------hH
Confidence            46789999998765           4678999998 43455778899999   8888888899886543210      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... ...........++       ......+.++...|++.+|.+||++.++++
T Consensus       204 ~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         204 KALF-KIATNGPPGLRNP-------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHH-HHHhcCCCCcCcc-------cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111 1111111111110       001234677888999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.87  E-value=1.5e-10  Score=87.99  Aligned_cols=103  Identities=10%  Similarity=0.005  Sum_probs=65.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+++.+||..+.....      .
T Consensus       132 ~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~tG~~Pf~~~~------~  201 (325)
T cd05594         132 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQD------H  201 (325)
T ss_pred             CCCEEEecCCCCeecCCCCcccccccCCcccCCHHH-HccCCCCCcccccc---ccceeeeeccCCCCCCCCC------H
Confidence            46799999998763            7889999998 44455678899999   6666777788877653211      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      .. .......+      ...+....+    ..+..+...|++.+|.+|+     +..++++
T Consensus       202 ~~-~~~~i~~~------~~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         202 EK-LFELILME------EIRFPRTLS----PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HH-HHHHHhcC------CCCCCCCCC----HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            00 00111000      001111112    2355677789999999996     8888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.87  E-value=6.2e-10  Score=83.12  Aligned_cols=115  Identities=10%  Similarity=0.015  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+++.++|..+...   ..   .
T Consensus       147 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~~~~~---~~---~  217 (295)
T cd07837         147 KGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS---VGCIFAEMSRKQPLFPG---DS---E  217 (295)
T ss_pred             CCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHH---HHHHHHHHHcCCCCCCC---CC---H
Confidence            56789999998874            4567999998443344578899999   77778888887644321   11   1


Q ss_pred             hhhhHHhhh---CCC------eeeecc----cccccc----ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWC---EGN------VQELMD----PVLKES----FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~---~~~------~~~~~d----~~l~~~----~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........   ...      ..+..+    +.....    .....-..+.++...|++.+|.+||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         218 LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            111111110   000      000000    000000    00112234667888999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.87  E-value=1.1e-10  Score=88.47  Aligned_cols=100  Identities=12%  Similarity=0.050  Sum_probs=62.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   ||+.+++.+||+.+....      ..
T Consensus       134 ~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~tg~~p~~~~------~~  203 (318)
T cd05582         134 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWS---FGVLMFEMLTGSLPFQGK------DR  203 (318)
T ss_pred             CCcEEEeeccCCcccCCCCCceecccCChhhcCHHH-HcCCCCCCccceec---cceEeeeeccCCCCCCCC------CH
Confidence            46789999998864            6789999998 43445577899999   555566777887664321      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      ........ ....      .+....+    ..+..+...|++.+|.+||++.+
T Consensus       204 ~~~~~~i~-~~~~------~~p~~~~----~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         204 KETMTMIL-KAKL------GMPQFLS----PEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHHHH-cCCC------CCCCCCC----HHHHHHHHHHhhcCHhHcCCCCC
Confidence            11111111 1110      0111111    23456778999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.87  E-value=2.6e-09  Score=81.82  Aligned_cols=54  Identities=13%  Similarity=-0.028  Sum_probs=42.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.         ++..|+|||...+....+.++|+|+   ||+.+.+.++|+.+.
T Consensus       153 ~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lGvil~el~~g~~pf  215 (342)
T cd07879         153 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWS---VGCIMAEMLTGKTLF  215 (342)
T ss_pred             CCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHH---HHHHHHHHHhCCCCC
Confidence            56799999999875         4677999998443345678899999   888888999988654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.87  E-value=2.7e-09  Score=79.24  Aligned_cols=118  Identities=13%  Similarity=0.010  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            ++..|++||+..+....+.++|+|+   ||+.+++.++|..+.......   ..
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s---lG~i~~~l~~g~~p~~~~~~~---~~  209 (286)
T cd07847         136 QGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWA---IGCVFAELLTGQPLWPGKSDV---DQ  209 (286)
T ss_pred             CCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHH---HHHHHHHHHhCCCCCCCCChH---HH
Confidence            45789999999874            4568999998433344567899999   888888999987654321111   00


Q ss_pred             hhhhHHh-----------hhCCCe-eeeccccccccccH-----HHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKL-----------WCEGNV-QELMDPVLKESFIL-----EEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~-----------~~~~~~-~~~~d~~l~~~~~~-----~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......           +..... .....+......+.     ..-..+.++...|++.+|++||++.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         210 LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            1000000           000000 00011111000011     11235678889999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.87  E-value=1.4e-09  Score=82.00  Aligned_cols=118  Identities=8%  Similarity=-0.100  Sum_probs=67.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||...+....+.++|+|+   +|+.+.+..+|..+....-   ....
T Consensus       144 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws---lG~il~el~~g~~~f~~~~---~~~~  217 (309)
T cd07845         144 KGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWA---VGCILAELLAHKPLLPGKS---EIEQ  217 (309)
T ss_pred             CCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHH---HHHHHHHHHhCCCCCCCCC---HHHH
Confidence            45789999998875            3556999998444445678899999   8888888888876543211   1111


Q ss_pred             hhhhHHhhh-----------CCCeeee--ccccccccc---cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWC-----------EGNVQEL--MDPVLKESF---ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~-----------~~~~~~~--~d~~l~~~~---~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........           .......  +........   .......+..+...|++.+|.+||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         218 LDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            111111000           0000000  000000000   0001234556888999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.87  E-value=1.1e-09  Score=89.85  Aligned_cols=106  Identities=12%  Similarity=0.051  Sum_probs=72.0

Q ss_pred             cccceeeeeEeecC---------------------CCCCCCCCCc--ccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------------GRTGDDDEGY--SYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------------gt~~y~ape~--~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +.+-||||||-+..                     -|+-|-+||.  .++.....+|+|+|+.|+|.|.|.   -    .
T Consensus       182 ~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC---y----~  254 (738)
T KOG1989|consen  182 DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC---Y----F  254 (738)
T ss_pred             CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH---H----h
Confidence            45679999997764                     5789999997  456667789999999555544333   1    1


Q ss_pred             CCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           59 ENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        59 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .               ..++++....|++..-.=......-.++-.|...|++.+|++||++-+|+..+..
T Consensus       255 t---------------~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  255 T---------------TPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             C---------------CCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence            1               1233333445666554211123444567778888999999999999999876654

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.87  E-value=1.6e-09  Score=80.94  Aligned_cols=107  Identities=11%  Similarity=-0.010  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||++..           |+..|+|||+ ......+.++|+|+   ||+.+.+.++|..+.........  . 
T Consensus       138 ~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~~~Diws---lG~~l~~l~~g~~Pf~~~~~~~~--~-  210 (285)
T cd05630         138 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDWWA---LGCLLYEMIAGQSPFQQRKKKIK--R-  210 (285)
T ss_pred             CCCEEEeeccceeecCCCccccCCCCCccccChHH-HcCCCCCCccccHH---HHHHHHHHHhCCCCCCCCCccch--H-
Confidence            45789999998863           6789999998 44455677899999   78888888898877543211100  0 


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      .........      ..........    ..+.++...|++.+|.+||+     +.++..
T Consensus       211 ~~~~~~~~~------~~~~~~~~~~----~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         211 EEVERLVKE------VQEEYSEKFS----PDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHhhhhh------hhhhcCccCC----HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            000000000      0001111111    23566778899999999999     677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.87  E-value=8.6e-10  Score=79.34  Aligned_cols=107  Identities=12%  Similarity=-0.041  Sum_probs=67.8

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||.+..           ++..|++||. ......+.++|+|+   +|+.+++..++..+....  ...... 
T Consensus       123 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~-~~~~~~~~~~Di~s---lG~~l~~l~~~~~p~~~~--~~~~~~-  195 (244)
T smart00220      123 DGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV-LLGKGYGKAVDVWS---LGVILYELLTGKPPFPGD--DQLLEL-  195 (244)
T ss_pred             CCcEEEccccceeeeccccccccccCCcCCCCHHH-HccCCCCchhhHHH---HHHHHHHHHhCCCCCCCC--CcHHHH-
Confidence            45789999998774           5778999998 33445566999999   777788888887554221  100011 


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ......+..    ......   ......+.++..+|+..+|++||++.++++
T Consensus       196 ---~~~~~~~~~----~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      196 ---FKKIGKPKP----PFPPPE---WKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             ---HHHHhccCC----CCcccc---ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence               111111110    000000   002246778999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.86  E-value=1.4e-09  Score=81.65  Aligned_cols=117  Identities=15%  Similarity=-0.013  Sum_probs=67.4

Q ss_pred             cccceeeeeEeecC-----------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.                       ++..|+|||...+....+.++|+|+   ||+.+.+.++|..+.
T Consensus       151 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~il~el~~g~~~~  227 (311)
T cd07866         151 QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWG---IGCVFAEMFTRRPIL  227 (311)
T ss_pred             CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHH---HHHHHHHHHhCCCCC
Confidence            56789999998874                       2455999997443444677899999   777888888887553


Q ss_pred             CCCCCCCCcchhhhhHHhhhC---------CCeee----e----ccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           59 ENKLGEGGFGPVYKTWKLWCE---------GNVQE----L----MDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        59 ~~~~~~~~~~lv~~~~~~~~~---------~~~~~----~----~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      ......   ......+.....         ..+..    .    ..+.+.... ......+.++...|++.+|.+||++.
T Consensus       228 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~  303 (311)
T cd07866         228 QGKSDI---DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTAS  303 (311)
T ss_pred             CCCCHH---HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHHHHHcccCcccCcCHH
Confidence            211100   000000000000         00000    0    111111000 11124577889999999999999999


Q ss_pred             HHHH
Q 041157          122 SVVV  125 (169)
Q Consensus       122 ~V~~  125 (169)
                      +++.
T Consensus       304 ell~  307 (311)
T cd07866         304 DALE  307 (311)
T ss_pred             HHhc
Confidence            8864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=2.4e-09  Score=78.49  Aligned_cols=111  Identities=10%  Similarity=-0.059  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKT   73 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~   73 (169)
                      +..+||+|||+++.        ++..|++||. ......+.++|+|+   +|+.+++..||..+.....      . ...
T Consensus       133 ~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~------~-~~~  201 (260)
T cd05611         133 TGHLKLTDFGLSRNGLENKKFVGTPDYLAPET-ILGVGDDKMSDWWS---LGCVIFEFLFGYPPFHAET------P-DAV  201 (260)
T ss_pred             CCcEEEeecccceeccccccCCCCcCccChhh-hcCCCCcchhhhHH---HHHHHHHHHHCCCCCCCCC------H-HHH
Confidence            46789999998874        6789999998 43344678899999   7778888889887653211      0 111


Q ss_pred             HHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        74 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      +.....+...  ......    ......+..+...|++.+|++||+..++.+.|..
T Consensus       202 ~~~~~~~~~~--~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         202 FDNILSRRIN--WPEEVK----EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             HHHHHhcccC--CCCccc----ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            1111111110  010111    1122346788889999999999988777666543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.85  E-value=7.2e-10  Score=84.52  Aligned_cols=118  Identities=8%  Similarity=0.008  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                |+..|++||+..+....+.++|+|+   ||+.+.+..+|+.+....   .
T Consensus       143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s---lG~~l~el~~g~~pf~~~---~  216 (334)
T cd07855         143 DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS---VGCIFAEMLGRRQLFPGK---N  216 (334)
T ss_pred             CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHH---HHHHHHHHHcCCCccCCC---C
Confidence            56789999998863                5668999998333345678899999   777777878877654221   1


Q ss_pred             CcchhhhhHHhhh-----------CCCeeeecccc-cccccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWC-----------EGNVQELMDPV-LKESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~-----------~~~~~~~~d~~-l~~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............           ...+.+..+.- ......     ......+..+...|++.+|.+||++.+++.
T Consensus       217 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         217 YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0001111000000           00000000000 000000     112345778889999999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.85  E-value=1e-09  Score=81.71  Aligned_cols=107  Identities=9%  Similarity=-0.053  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          |+..|+|||........+.++|+|+   +|+.+.+.++|..+........    ..
T Consensus       133 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~~~~~----~~  205 (279)
T cd05633         133 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFS---LGCMLFKLLRGHSPFRQHKTKD----KH  205 (279)
T ss_pred             CCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHH---HHHHHHHHHhCCCCcCCCCCcC----HH
Confidence            46789999998863          7899999998332334567899999   8888889999887753221111    00


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......      ......+....    ...+..+...|++.+|.+||     ++.++.+
T Consensus       206 ~~~~~~------~~~~~~~~~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         206 EIDRMT------LTVNVELPDSF----SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHHHHh------hcCCcCCcccc----CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            111000      01111221111    23455667799999999999     5888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.85  E-value=3.8e-09  Score=77.68  Aligned_cols=106  Identities=12%  Similarity=0.091  Sum_probs=67.0

Q ss_pred             cceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            4 KQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         4 ~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      .+||+|||+++.                |+.+|+|||+ ......+.++|+|+   +|+.+++..+|..+.......   
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~Dv~s---lG~~l~~l~~g~~p~~~~~~~---  214 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV-LRGEQYGRSCDVWS---VGCVIIEMATAKPPWNAEKHS---  214 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhH-hccCCCCcccchHH---HHHHHHHHHhCCCCCCCCCCc---
Confidence            579999998753                4668999998 43455678899999   888888888988664321111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ............     ...+.    .+...-..+.++...|++.+|++||+..+++.
T Consensus       215 ~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         215 NHLALIFKIASA-----TTAPS----IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             chHHHHHHHhcc-----CCCCC----CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            111111111000     00111    11222245667888999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.85  E-value=8e-09  Score=74.45  Aligned_cols=111  Identities=11%  Similarity=0.050  Sum_probs=74.9

Q ss_pred             cccceeeeeEeecC---------------------CCCCCCCCCcccc---cccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE---------------------GRTGDDDEGYSYN---ILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------------gt~~y~ape~~~~---~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      ...|++.|||-+..                     -|..|-|||. ++   ....++++|+||   +|..+...+-+..|
T Consensus       165 ~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPEL-f~vk~~~ti~ertDIWS---LGCtLYa~mf~~sP  240 (302)
T KOG2345|consen  165 SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPEL-FNVKSHCTITERTDIWS---LGCTLYAMMFGESP  240 (302)
T ss_pred             CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchh-eecccCcccccccchhh---hhHHHHHHHHcCCc
Confidence            46899999997764                     4789999998 43   346689999999   77777777766666


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+.....|+ ++            ...+..+.+.-.....--+.+.++..+|++.+|.+||+..+++..++.
T Consensus       241 fe~~~~~Gg-Sl------------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  241 FERIYQQGG-SL------------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             chHHhhcCC-eE------------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            544333222 10            122333333100001123467788889999999999999999988765

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.84  E-value=1.2e-09  Score=82.73  Aligned_cols=106  Identities=15%  Similarity=0.138  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..        |+..|+|||+...  ....+.++|+|+   ||+.+++..+|..+....   .......
T Consensus       157 ~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s---lGvil~el~~g~~p~~~~---~~~~~~~  230 (313)
T cd06633         157 PGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNM---NAMSALY  230 (313)
T ss_pred             CCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHH---HHHHHHHHHhCCCCCCCC---ChHHHHH
Confidence            45689999998775        6778999998332  234567899999   787888888888764221   1111111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +   .. .........    ..++    ..+..+...|++.+|.+||++.+++.
T Consensus       231 ~---~~-~~~~~~~~~----~~~~----~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         231 H---IA-QNDSPTLQS----NEWT----DSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             H---HH-hcCCCCCCc----cccC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1   11 111101111    1111    23566788999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.84  E-value=1.1e-09  Score=82.01  Aligned_cols=117  Identities=13%  Similarity=-0.023  Sum_probs=67.8

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             ++..|++||+..+....+.++|+|+   ||+.+++..+|+.+....   ....
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s---lG~~~~el~~g~~~~~~~---~~~~  225 (302)
T cd07864         152 KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWS---CGCILGELFTKKPIFQAN---QELA  225 (302)
T ss_pred             CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHH---HHHHHHHHHhCCCCCCCC---ChHH
Confidence            56789999998874             2557999997333334567899999   788888888887554321   1111


Q ss_pred             hhhhhHHhhhCCC---eeee--------ccc------cccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGN---VQEL--------MDP------VLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~---~~~~--------~d~------~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............   ..++        .++      .+.... ......+.++...|++.+|.+||++.+|+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         226 QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111111100000   0000        000      000000 011245678888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=2.1e-09  Score=87.28  Aligned_cols=106  Identities=19%  Similarity=0.154  Sum_probs=72.4

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCccc-ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSY-NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~-~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ...||+|||-++.            ||.-|||||..- +..-.....|+|+   ||..++|.+||+-+... ++...   
T Consensus       713 GvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS---~GCT~vEMATGrPPF~E-lgspq---  785 (1226)
T KOG4279|consen  713 GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWS---FGCTMVEMATGRPPFVE-LGSPQ---  785 (1226)
T ss_pred             ceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhh---ccceeEeeccCCCCeee-cCChh---
Confidence            3579999998886            999999999832 2222346789999   88889999999876432 22210   


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          ...+.-|  +--++|.+    +.+.-..+-...++|-.++|.+||+.++.++
T Consensus       786 ----AAMFkVG--myKvHP~i----Peelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  786 ----AAMFKVG--MYKVHPPI----PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             ----Hhhhhhc--ceecCCCC----cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence                1122211  12244443    3444455667889999999999999999875

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.84  E-value=6.6e-10  Score=84.47  Aligned_cols=99  Identities=13%  Similarity=-0.005  Sum_probs=64.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   +|+.+++.+||..+.....   ...+
T Consensus       137 ~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~elltG~~pf~~~~---~~~~  209 (323)
T cd05615         137 EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEI-IAYQPYGKSVDWWA---YGVLLYEMLAGQPPFDGED---EDEL  209 (323)
T ss_pred             CCCEEEeccccccccCCCCccccCccCCccccCHHH-HcCCCCCCccchhh---hHHHHHHHHhCCCCCCCCC---HHHH
Confidence            56789999998874            7889999998 44455678899999   8888889999887753211   0011


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      .   .... ....      ..    +......+..+...|++.+|.+|++..
T Consensus       210 ~---~~i~-~~~~------~~----p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         210 F---QSIM-EHNV------SY----PKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             H---HHHH-hCCC------CC----CccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            1   1111 1110      11    111123456778899999999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.84  E-value=9.1e-10  Score=81.42  Aligned_cols=108  Identities=16%  Similarity=0.055  Sum_probs=67.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+|++|||+++.             ++..|++||+ ........++|+|+   ||+.+++..+ |..+... ....  
T Consensus       153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~~l~~l~~~~~~p~~~-~~~~--  225 (275)
T cd05046         153 QREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEA-VQEDDFSTKSDVWS---FGVLMWEVFTQGELPFYG-LSDE--  225 (275)
T ss_pred             CCcEEEcccccccccCcccccccCCceeEEeecChhh-hccCCCCchhhHHH---HHHHHHHHHhCCCCCccc-cchH--
Confidence            45789999998763             3456999998 33444567899999   7777777777 4333211 1000  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ..+.    ....+.....    ...    .....+.++..+|++.+|.+||++.+++..|.
T Consensus       226 ~~~~----~~~~~~~~~~----~~~----~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         226 EVLN----RLQAGKLELP----VPE----GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHH----HHHcCCcCCC----CCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1111    1111111100    011    11235778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.83  E-value=3.7e-09  Score=78.26  Aligned_cols=118  Identities=9%  Similarity=-0.042  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|+|||+..+....+.++|+|+   ||+.+++..+|+.+.....   ....
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~s---lG~~l~~l~~~~~~~~~~~---~~~~  207 (282)
T cd07829         134 DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWS---VGCIFAEMITGKPLFPGDS---EIDQ  207 (282)
T ss_pred             CCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHH---HHHHHHHHHhCCCCCCCcc---HHHH
Confidence            46789999998874            3567999998443336678899999   8888888888865432211   0001


Q ss_pred             hhhh-----------HHhhhCCC-eeeeccccccc---cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKT-----------WKLWCEGN-VQELMDPVLKE---SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~-----------~~~~~~~~-~~~~~d~~l~~---~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..+.           |..+..-. ...........   ......-..+.++...|++.+|.+||++.+|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            1111           00000000 00000000000   000011245788899999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.83  E-value=2e-09  Score=80.08  Aligned_cols=107  Identities=10%  Similarity=-0.049  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          |+..|+|||+..+....+.++|+|+   +|+.+++.++|+.+.........    .
T Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---~G~~l~~l~~g~~p~~~~~~~~~----~  205 (278)
T cd05606         133 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS---LGCMLFKLLRGHSPFRQHKTKDK----H  205 (278)
T ss_pred             CCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHh---HHHHHHHHHhCCCCCCCCCccch----H
Confidence            56789999998863          7889999998333334567899999   88888899999887543211110    0


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......      ...+..+....    ...+..+...|++.+|.+||     ++.++.+
T Consensus       206 ~~~~~~------~~~~~~~~~~~----s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         206 EIDRMT------LTMAVELPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHh------hccCCCCCCcC----CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            000000      01112221111    23466677899999999999     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.83  E-value=3.6e-09  Score=90.04  Aligned_cols=102  Identities=10%  Similarity=-0.082  Sum_probs=67.5

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      .+||+|||+++.           ||..|+|||+..+ ....+.++|+|+   ||+.+++++||..+....-     .+..
T Consensus       180 iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWS---LG~ILYELLTGk~PF~~~~-----~~~q  251 (1021)
T PTZ00266        180 IAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWA---LGCIIYELCSGKTPFHKAN-----NFSQ  251 (1021)
T ss_pred             ceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHH---HHHHHHHHHHCCCCCCcCC-----cHHH
Confidence            479999998874           7899999998432 234567899999   8888999999987753210     1111


Q ss_pred             hhHHhhhCCCeeeecccccc-ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLK-ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ....+..+       +.+. ...    ...+..+...|++.+|.+||++.+++.
T Consensus       252 -li~~lk~~-------p~lpi~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        252 -LISELKRG-------PDLPIKGK----SKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             -HHHHHhcC-------CCCCcCCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence             11111111       1110 111    134667888999999999999999973

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.83  E-value=2.1e-09  Score=86.42  Aligned_cols=113  Identities=12%  Similarity=0.058  Sum_probs=71.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.+.||||||+|..           |.+.|.+||...+..+...++|||+.|+   .+..++||+.+.+.    +  .+-
T Consensus       148 ~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGV---ILfALLtG~LPFdD----d--Nir  218 (786)
T KOG0588|consen  148 KNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGV---ILFALLTGKLPFDD----D--NIR  218 (786)
T ss_pred             ccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHH---HHHHHHhCCCCCCC----c--cHH
Confidence            34699999999987           8999999999777778889999999555   46677788887542    1  111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhcCCCCCC
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLATDTITLP  135 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~~~~~~~  135 (169)
                      . ......+|.. +|=     .....    .+..+.-.-+..||..|-||.||.+  .|.+ ...++
T Consensus       219 ~-LLlKV~~G~f-~MP-----s~Is~----eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g-~~~~~  273 (786)
T KOG0588|consen  219 V-LLLKVQRGVF-EMP-----SNISS----EAQDLLRRMLDVDPSTRITTEEILKHPFLSG-YTSLP  273 (786)
T ss_pred             H-HHHHHHcCcc-cCC-----CcCCH----HHHHHHHHHhccCccccccHHHHhhCchhhc-CCCCC
Confidence            1 1111122221 111     11111    1223333445779999999999987  5665 44333

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.82  E-value=2.9e-09  Score=81.63  Aligned_cols=103  Identities=11%  Similarity=-0.032  Sum_probs=66.2

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +.++||+|||+++.         ||..|+|||+ +.....+.++|+|+   +|+.+.+.++|..+....   .   .. .
T Consensus       167 ~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~ell~G~~Pf~~~---~---~~-~  235 (340)
T PTZ00426        167 DGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEI-LLNVGHGKAADWWT---LGIFIYEILVGCPPFYAN---E---PL-L  235 (340)
T ss_pred             CCCEEEecCCCCeecCCCcceecCChhhcCHHH-HhCCCCCccccccc---hhhHHHHHhcCCCCCCCC---C---HH-H
Confidence            56799999999874         7889999998 43444567899999   777788888988765321   0   00 1


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      .......+..  .+.    ...+    ..+..+...|++.+|.+|+     +..++.+
T Consensus       236 ~~~~i~~~~~--~~p----~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        236 IYQKILEGII--YFP----KFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HHHHHhcCCC--CCC----CCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            1111111110  011    1111    2345677799999999995     7887754

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.82  E-value=7.8e-10  Score=83.90  Aligned_cols=99  Identities=8%  Similarity=-0.139  Sum_probs=63.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+++.++|..+....      ..
T Consensus       132 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~------~~  201 (321)
T cd05603         132 QGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEV-LRKEPYDRTVDWWC---LGAVLYEMLYGLPPFYSR------DV  201 (321)
T ss_pred             CCCEEEccCCCCccCCCCCCccccccCCcccCCHHH-hcCCCCCCcCcccc---cchhhhhhhcCCCCCCCC------CH
Confidence            56799999998764            6789999998 44455677899999   777788888888764321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      ..... ....+.      ..+..    .....+..+...|++.+|.+||+..
T Consensus       202 ~~~~~-~i~~~~------~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         202 SQMYD-NILHKP------LQLPG----GKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHH-HHhcCC------CCCCC----CCCHHHHHHHHHHccCCHhhcCCCC
Confidence            11111 111110      00111    1123466788899999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.82  E-value=5.6e-09  Score=77.83  Aligned_cols=112  Identities=10%  Similarity=-0.044  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccc-cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNIL-RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~-~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             |+..|++||...+.. ..+.++|+|+   ||+.+.+..||..+.......  .
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~s---lG~il~el~tg~~p~~~~~~~--~  215 (288)
T cd05583         141 EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWS---LGVLTFELLTGASPFTVDGEQ--N  215 (288)
T ss_pred             CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHH---HHHHHHHHHhCCCCcccCccc--c
Confidence            45789999998864             577899999832221 2567899999   788888888988765321100  0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...........       .++......+    ..+.++..+|++.+|+.||++.+|.+.|+.
T Consensus       216 ~~~~~~~~~~~-------~~~~~~~~~~----~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         216 SQSEISRRILK-------SKPPFPKTMS----AEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             hHHHHHHHHHc-------cCCCCCcccC----HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            00111111110       0111111111    235567789999999999999999888765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=7.6e-10  Score=80.58  Aligned_cols=104  Identities=16%  Similarity=0.164  Sum_probs=67.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ++..|++||+ ......+.+.|+|+   +|+.+.+.++|..+.....      .
T Consensus       135 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~~---lG~~l~~l~~g~~p~~~~~------~  204 (254)
T cd06627         135 DGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEV-IEMSGASTASDIWS---LGCTVIELLTGNPPYYDLN------P  204 (254)
T ss_pred             CCCEEEeccccceecCCCcccccccccchhhcCHhh-hcCCCCCcchhHHH---HHHHHHHHHhCCCCCCCcc------H
Confidence            46789999998874            5678999998 33444678899999   7888888888876643211      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....+.. ....     .+.+..    .....+..+..+|++.+|++||++.+++.
T Consensus       205 ~~~~~~~-~~~~-----~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         205 MAALFRI-VQDD-----HPPLPE----GISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHH-hccC-----CCCCCC----CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            0001111 1110     111111    11235567888999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.82  E-value=2e-09  Score=90.95  Aligned_cols=110  Identities=15%  Similarity=0.099  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC------------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHH
Q 041157            2 NAKQKVLQFLRSGE------------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHE   51 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~   51 (169)
                      +..+||+|||+++.                              ||..|+|||. ......+.++|+|+   +|+.+++.
T Consensus       149 dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~-l~g~~~S~kSDIWS---LGVILyEL  224 (932)
T PRK13184        149 FGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPER-LLGVPASESTDIYA---LGVILYQM  224 (932)
T ss_pred             CCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHH-hcCCCCCcHhHHHH---HHHHHHHH
Confidence            46789999998752                              6889999998 44556688999999   88889999


Q ss_pred             HHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-CHHHHHHHHhc
Q 041157           52 ATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-TMSSVVVMLAT  129 (169)
Q Consensus        52 ~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-~m~~V~~~L~~  129 (169)
                      +||..+.....+.   ....       ..   .+.++.-... ..+....+.+++.+|++.+|++|| ++.++.+.|+.
T Consensus       225 LTG~~PF~~~~~~---ki~~-------~~---~i~~P~~~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        225 LTLSFPYRRKKGR---KISY-------RD---VILSPIEVAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             HHCCCCCCCcchh---hhhh-------hh---hccChhhccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            9998875331111   0000       00   0111110000 011123456788899999999996 55666666654

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.82  E-value=7e-09  Score=75.94  Aligned_cols=108  Identities=16%  Similarity=0.156  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ..+.|+||||+|..           |-..|||||-.--  .....-.+|||+   ||+.++|++||.++...  ....|.
T Consensus       228 ~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWS---lGITlveLaTg~yPy~~--c~tdFe  302 (391)
T KOG0983|consen  228 RGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWS---LGITLVELATGQYPYKG--CKTDFE  302 (391)
T ss_pred             CCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhh---hccchhhhhcccCCCCC--CCccHH
Confidence            46889999999875           7789999996211  112334589999   88889999999998643  223333


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....+..   +      .-|.|.+..  .---.+.++...|++.++.+||.-.+.++
T Consensus       303 ~ltkvln---~------ePP~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  303 VLTKVLN---E------EPPLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHHh---c------CCCCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            3333221   0      113332211  01124566777899999999999887654

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=7.2e-10  Score=84.85  Aligned_cols=92  Identities=11%  Similarity=-0.117  Sum_probs=54.2

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeecccccccccc
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFI   95 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~   95 (169)
                      ||..|+|||. ......+.++|+|+   ||+.+.++++|+.+.....      .............  ...-+.. ...+
T Consensus       192 gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~--~~~~p~~-~~~~  258 (350)
T cd05573         192 GTPDYIAPEV-LRGTPYGLECDWWS---LGVILYEMLYGFPPFYSDT------LQETYNKIINWKE--SLRFPPD-PPVS  258 (350)
T ss_pred             cCccccCHHH-HcCCCCCCceeeEe---cchhhhhhccCCCCCCCCC------HHHHHHHHhccCC--cccCCCC-CCCC
Confidence            6788999998 44456678999999   7777888889887753211      1111111111000  0000000 0011


Q ss_pred             HHHHHHHHHHhhhhcCCCCCCCCC-HHHHHH
Q 041157           96 LEEILKRIHIGLLCVQEDPADRPT-MSSVVV  125 (169)
Q Consensus        96 ~~~~~~~~~ia~~C~~~~p~~RP~-m~~V~~  125 (169)
                          ..+..+...|++ +|.+||+ +.++++
T Consensus       259 ----~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         259 ----PEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             ----HHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence                234556667887 9999999 999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.81  E-value=5.7e-10  Score=85.02  Aligned_cols=53  Identities=9%  Similarity=-0.053  Sum_probs=40.3

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.                |+..|+|||+..+....+.++|+|+   +|+.+.+.++|..+
T Consensus       141 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~s---lGv~l~~l~~g~~p  209 (332)
T cd07857         141 DCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWS---VGCILAELLGRKPV  209 (332)
T ss_pred             CCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHH---HHHHHHHHHhCCcC
Confidence            45789999998863                6778999998443345578899999   77777777777654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.81  E-value=3.6e-09  Score=82.15  Aligned_cols=121  Identities=12%  Similarity=0.043  Sum_probs=73.8

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccC-----CccccCCCCCCcCHHHHHHHHhCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRG-----NKKVESQELPLFPLDLIHEATRNFSNENK   61 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~-----~~~~dv~s~~~~~~~ll~~~t~~~~~~~~   61 (169)
                      .|+++.|||||||..              ||..|||||+.-+....     =...|||+   .|+++.|.+++--.... 
T Consensus       351 ~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYa---mgLVLWEi~SRC~~~~~-  426 (534)
T KOG3653|consen  351 NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYA---MGLVLWEIASRCTDADP-  426 (534)
T ss_pred             cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHH---HHHHHHHHHhhcccccC-
Confidence            478999999999996              89999999984333222     25589999   77777777765433211 


Q ss_pred             CCCCCcchhhh-----------hHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           62 LGEGGFGPVYK-----------TWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        62 ~~~~~~~lv~~-----------~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      -.-..+.+.+.           .+....    .+-.-|.+...+ ....+..+.+....||.++|+-|-|..=|-+.+..
T Consensus       427 ~~vp~Yqlpfe~evG~hPt~e~mq~~VV----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~  502 (534)
T KOG3653|consen  427 GPVPEYQLPFEAEVGNHPTLEEMQELVV----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAE  502 (534)
T ss_pred             CCCCcccCchhHHhcCCCCHHHHHHHHH----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHH
Confidence            01111111111           111111    111122222111 11345566778889999999999999999888877

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.81  E-value=3.2e-09  Score=78.82  Aligned_cols=118  Identities=8%  Similarity=-0.046  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+|++|||+++.            ++..|++||+..+....+.++|+|+   +|+.+++.++|..+.......   ..
T Consensus       136 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s---lG~~l~~l~~g~~~~~~~~~~---~~  209 (284)
T cd07836         136 RGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWS---VGCIMAEMITGRPLFPGTNNE---DQ  209 (284)
T ss_pred             CCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCcH---HH
Confidence            56789999998863            4678999998443344567899999   888888999987664321111   11


Q ss_pred             hhhhHHhhhC--------CCeeeecccccc-------ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCE--------GNVQELMDPVLK-------ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~--------~~~~~~~d~~l~-------~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........        ............       ..........+.++...|++.+|.+||++.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         210 LLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            1111000000        000000000000       0000111234667888999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=6.8e-09  Score=77.01  Aligned_cols=107  Identities=17%  Similarity=0.090  Sum_probs=66.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...||+|||++..            ++..|++||+...    ....+.++|+|+   ||+.+++..+|..+.....   
T Consensus       139 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~s---lG~il~~l~~g~~p~~~~~---  212 (280)
T cd06611         139 DGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWS---LGITLIELAQMEPPHHELN---  212 (280)
T ss_pred             CCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHH---HHHHHHHHHhCCCCcccCC---
Confidence            46789999998753            6788999998321    223456899999   8888888889876643210   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ...... ....+.     .+.+..  +......+.++...|++.+|.+||++.+|++
T Consensus       213 ---~~~~~~-~~~~~~-----~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         213 ---PMRVLL-KILKSE-----PPTLDQ--PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             ---HHHHHH-HHhcCC-----CCCcCC--cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence               111111 111111     011100  0111124566778999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=8.2e-10  Score=88.02  Aligned_cols=107  Identities=11%  Similarity=0.077  Sum_probs=71.7

Q ss_pred             ccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            3 AKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         3 ~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      ..+||+|.|||..          ||+-+||||. | .-.....+|||+   ||+.+||.+|+.+|.....+.      -.
T Consensus       183 G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEm-Y-EE~YnE~VDVYa---FGMCmLEMvT~eYPYsEC~n~------AQ  251 (632)
T KOG0584|consen  183 GEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEM-Y-EENYNELVDVYA---FGMCMLEMVTSEYPYSECTNP------AQ  251 (632)
T ss_pred             CceeecchhHHHHhhccccceeccCccccChHH-H-hhhcchhhhhhh---hhHHHHHHHhccCChhhhCCH------HH
Confidence            4689999999985          9999999997 5 355678899999   999999999999987543221      01


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      +......|..-..++.     ...-+   +-++...|+.. .++||+..|.+.  .|..
T Consensus       252 IYKKV~SGiKP~sl~k-----V~dPe---vr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  252 IYKKVTSGIKPAALSK-----VKDPE---VREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             HHHHHHcCCCHHHhhc-----cCCHH---HHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            1112222221111111     11122   34566789999 999999999875  4444

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.80  E-value=7.4e-09  Score=76.59  Aligned_cols=105  Identities=7%  Similarity=-0.083  Sum_probs=66.5

Q ss_pred             cceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHH
Q 041157            4 KQKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWK   75 (169)
Q Consensus         4 ~~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~   75 (169)
                      .+||+|||+++.        ++..|+|||+ ......+.++|+|+   +|+.+++.++|..+......+ ...+..+...
T Consensus       148 ~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~  222 (267)
T PHA03390        148 RIYLCDYGLCKIIGTPSCYDGTLDYFSPEK-IKGHNYDVSFDWWA---VGVLTYELLTGKHPFKEDEDE-ELDLESLLKR  222 (267)
T ss_pred             eEEEecCccceecCCCccCCCCCcccChhh-hcCCCCCchhhHHH---HHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHh
Confidence            689999998874        7889999998 43445577899999   888889999998776422111 1111111111


Q ss_pred             hhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-HHHHHH
Q 041157           76 LWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-MSSVVV  125 (169)
Q Consensus        76 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-m~~V~~  125 (169)
                      .  . .  ..  +.. .    ..-..+..+...|++.+|.+||+ +.++++
T Consensus       223 ~--~-~--~~--~~~-~----~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        223 Q--Q-K--KL--PFI-K----NVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             h--c-c--cC--Ccc-c----ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            0  0 0  00  000 0    11124556677999999999995 677763

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.80  E-value=1.7e-09  Score=79.33  Aligned_cols=102  Identities=16%  Similarity=0.045  Sum_probs=65.7

Q ss_pred             cceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            4 KQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         4 ~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      .+||+|||+++.            |+..|++||+ ......+.++|+|+   ||+.+++.+++..+...   .   ....
T Consensus       143 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~Dv~s---lG~~~~~l~~~~~~~~~---~---~~~~  212 (260)
T cd08222         143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEA-LKHQGYDSKSDIWS---LGCILYEMCCLAHAFEG---Q---NFLS  212 (260)
T ss_pred             CEeecccCceeecCCCcccccCCCCCcCccCHHH-HccCCCCchhhHHH---HHHHHHHHHhCCCCCCC---c---cHHH
Confidence            479999998764            6778999998 43444567799999   77778888887765421   0   1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..... ..+     ..+.+    +......+..+..+|++.+|++||++.++++
T Consensus       213 ~~~~~-~~~-----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         213 VVLRI-VEG-----PTPSL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHH-HcC-----CCCCC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            11111 111     11111    1122235667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.80  E-value=1.8e-10  Score=84.25  Aligned_cols=109  Identities=15%  Similarity=0.086  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +...||+|||.+..            ++..|+|||........+.++|+|+   +|+.+++.++|..+.....      .
T Consensus       134 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~~~~p~~~~~------~  204 (260)
T PF00069_consen  134 NGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWS---LGIILYELLTGKLPFEESN------S  204 (260)
T ss_dssp             TSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHH---HHHHHHHHHHSSSSSTTSS------H
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc------c
Confidence            56789999998851            7789999998222667889999999   8888899999887654320      0


Q ss_pred             hhhhHHhhhCCCeeeeccccccccc--cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESF--ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... ....     +.....+....  .......+.++...|++.+|++||++.++++
T Consensus       205 ~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  205 DDQL-EIIE-----KILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHH-HHHH-----HHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhhh-hhhh-----hcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000 0000     01111110000  0001156778888999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.80  E-value=2.7e-09  Score=78.34  Aligned_cols=104  Identities=12%  Similarity=-0.075  Sum_probs=65.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ++..|++||. +.....+.++|+|+   +|+.+.+..+|..+......    ...
T Consensus       129 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~----~~~  200 (262)
T cd05572         129 NGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEI-ILNKGYDFSVDYWS---LGILLYELLTGRPPFGEDDE----DPM  200 (262)
T ss_pred             CCCEEEeeCCcccccCcccccccccCCcCccChhH-hcCCCCCChhhhhh---hHHHHHHHHhCCCCcCCCCC----CHH
Confidence            46789999999875           5678999998 43445577899999   77778888888776532211    011


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      .....         +.+.......+......+..+...|++.+|.+||+|.+
T Consensus       201 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  243 (262)
T cd05572         201 EIYND---------ILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLK  243 (262)
T ss_pred             HHHHH---------HhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcc
Confidence            11111         11100011111111345778889999999999999533

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.79  E-value=5.5e-09  Score=77.33  Aligned_cols=116  Identities=14%  Similarity=0.061  Sum_probs=75.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +...|+||||+||.            .|..|-|||...+.......+|+|+   +|.++.|..||.--.   .|+.....
T Consensus       137 ~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWA---iGCv~aEl~~G~pL~---PG~SDiDQ  210 (396)
T KOG0593|consen  137 NGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWA---IGCVFAELLTGEPLW---PGRSDIDQ  210 (396)
T ss_pred             CCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchh---hhHHHHHHhcCCcCC---CCcchHHH
Confidence            45789999999997            5778999999777677778899999   788888888876322   23333344


Q ss_pred             hhhhHHhhhCC--Ceeeecc----------ccc------cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           70 VYKTWKLWCEG--NVQELMD----------PVL------KESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        70 v~~~~~~~~~~--~~~~~~d----------~~l------~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                      .+.....+..-  ...+++.          |..      +..++ .....++.++..|++.+|++|++-.|.+
T Consensus       211 Ly~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  211 LYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             HHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHh
Confidence            44443322110  0011111          111      11111 1223677888999999999999998874

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.78  E-value=5.3e-10  Score=85.12  Aligned_cols=101  Identities=10%  Similarity=-0.039  Sum_probs=60.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+.+.+||..+....      ..
T Consensus       132 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Dvws---lGvil~elltG~~Pf~~~------~~  202 (330)
T cd05586         132 TGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWS---LGVLVFEMCCGWSPFYAE------DT  202 (330)
T ss_pred             CCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceec---cccEEEEeccCCCCCCCC------CH
Confidence            46789999999864            7889999998443334578899999   555566677887664211      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      . ........+..      .+....   ....+..+...|++.+|.+||+..
T Consensus       203 ~-~~~~~i~~~~~------~~~~~~---~~~~~~~li~~~L~~~P~~R~~~~  244 (330)
T cd05586         203 Q-QMYRNIAFGKV------RFPKNV---LSDEGRQFVKGLLNRNPQHRLGAH  244 (330)
T ss_pred             H-HHHHHHHcCCC------CCCCcc---CCHHHHHHHHHHcCCCHHHCCCCC
Confidence            1 11111111111      111100   112345677799999999999543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.78  E-value=1.8e-09  Score=82.21  Aligned_cols=107  Identities=5%  Similarity=-0.105  Sum_probs=61.8

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc-----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN-----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~-----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +.++||+|||+++.             ||..|+|||+...     ....+.++|+|+   ||+.+++.++|..+..... 
T Consensus       138 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws---lG~il~el~~g~~Pf~~~~-  213 (330)
T cd05601         138 TGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS---LGVIAYEMIYGRSPFHEGT-  213 (330)
T ss_pred             CCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeec---ccceeeeeccCCCCCCCCC-
Confidence            46799999998863             7889999998321     234457899999   5555667778877643211 


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                           .................  +. ....+    ..+..+...|++ +|.+||++.+++.
T Consensus       214 -----~~~~~~~i~~~~~~~~~--~~-~~~~~----~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         214 -----SAKTYNNIMNFQRFLKF--PE-DPKVS----SDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             -----HHHHHHHHHcCCCccCC--CC-CCCCC----HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence                 11111111111110000  00 00111    224445556776 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.78  E-value=1.8e-09  Score=79.05  Aligned_cols=109  Identities=16%  Similarity=-0.007  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC--------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENK   61 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~   61 (169)
                      +..+||+|||++..                    ++..|++||+ ......+.++|+|+   ||+.+.+..+|..+....
T Consensus       129 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~Dv~s---lG~~~~~l~~g~~p~~~~  204 (265)
T cd05579         129 NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV-ILGQGHSKTVDWWS---LGCILYEFLVGIPPFHGE  204 (265)
T ss_pred             CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHH-hcCCCCCcchhhHH---HHHHHHHHHhCCCCCCCC
Confidence            45789999998764                    3457999998 33445678899999   777888888887664321


Q ss_pred             CCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           62 LGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        62 ~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .      ........ ..+.    ...  ..  .......+..+...|++.+|.+||++.+|.+.|+.
T Consensus       205 ~------~~~~~~~~-~~~~----~~~--~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         205 T------PEEIFQNI-LNGK----IEW--PE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             C------HHHHHHHH-hcCC----cCC--Cc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            1      11111111 1111    000  00  00012456778889999999999999888777754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.78  E-value=4.1e-09  Score=80.75  Aligned_cols=118  Identities=13%  Similarity=0.059  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ++..|+|||...+....+.++|+|+   +|+.+.+.+||..+......   ...+..
T Consensus       154 ~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws---lGv~l~elltg~~pf~~~~~---~~~~~~  227 (343)
T cd07851         154 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS---VGCIMAELLTGKTLFPGSDH---IDQLKR  227 (343)
T ss_pred             CCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHH---HHHHHHHHHhCCCCCCCCCh---HHHHHH
Confidence            46789999999875         5678999998433345678899999   88888899998865432111   011110


Q ss_pred             hHHhh-----------hCCCeeeeccccc---cccc---cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLW-----------CEGNVQELMDPVL---KESF---ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~-----------~~~~~~~~~d~~l---~~~~---~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....           ........+....   ....   .......+.++...|++.+|.+||++.+|+.
T Consensus       228 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         228 IMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            00000           0000000000000   0000   0011346778899999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.77  E-value=2.5e-09  Score=82.83  Aligned_cols=108  Identities=9%  Similarity=-0.078  Sum_probs=65.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc---ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI---LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~---~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +.++||+|||+++.             ||..|+|||...+.   ...+.++|+|+   +|+.+++.++|..+....    
T Consensus       178 ~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwS---lGvilyelltG~~Pf~~~----  250 (370)
T cd05596         178 SGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS---VGVFLYEMLVGDTPFYAD----  250 (370)
T ss_pred             CCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeee---hhHHHHHHHhCCCCcCCC----
Confidence            57899999998753             78899999983322   23567899999   777888889988775321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCC--CCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPAD--RPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~--RP~m~~V~~  125 (169)
                        ..............  .+.-+.- ...+    ..+..+...|++.+|.+  ||++.+++.
T Consensus       251 --~~~~~~~~i~~~~~--~~~~~~~-~~~s----~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         251 --SLVGTYSKIMDHKN--SLTFPDD-IEIS----KQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             --CHHHHHHHHHcCCC--cCCCCCc-CCCC----HHHHHHHHHHccChhhccCCCCHHHHhc
Confidence              11111111111100  0100100 0111    23445667788888877  999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.76  E-value=9.3e-09  Score=79.39  Aligned_cols=123  Identities=15%  Similarity=0.044  Sum_probs=74.8

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCcccccccCC-----ccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGN-----KKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~-----~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      .|.+..|+|+|||..                ||..|||||+.-.+...+     .-.|+|+   ||+++.|.+.+--...
T Consensus       351 kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa---fgLVlWEiarRc~~gg  427 (513)
T KOG2052|consen  351 KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA---FGLVLWEIARRCESGG  427 (513)
T ss_pred             cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH---HHHHHHHHHHHhhcCC
Confidence            367889999999985                999999999832222211     3479999   7777777665443321


Q ss_pred             CCCCCCCcchhhhhHHhh--hCCCeee-eccccccc----cc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           60 NKLGEGGFGPVYKTWKLW--CEGNVQE-LMDPVLKE----SF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        60 ~~~~~~~~~lv~~~~~~~--~~~~~~~-~~d~~l~~----~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      . .  ..+-+.++-+-..  ....+.+ +...+++.    .+ ..+++..+.++..-||..||.-|-|.--+-+.|..
T Consensus       428 i-~--eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~  502 (513)
T KOG2052|consen  428 I-V--EEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK  502 (513)
T ss_pred             E-e--hhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence            0 0  0111222111000  0011112 22333333    22 34788899999999999999999998777777765

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=2.1e-09  Score=81.15  Aligned_cols=94  Identities=6%  Similarity=-0.108  Sum_probs=56.1

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeecccccccccc
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFI   95 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~   95 (169)
                      |+..|+|||+. .....+.++|+|+   ||+.++++++|..+....-..   .       .+     .++.+....-...
T Consensus       194 g~~~y~aPE~~-~~~~~~~~~Di~s---lG~ll~~l~~g~~pf~~~~~~---~-------~~-----~~~~~~~~~~~~~  254 (316)
T cd05574         194 GTEEYIAPEVI-SGDGHGSAVDWWT---LGILLYEMLYGTTPFKGSNRD---E-------TF-----SNILKKEVTFPGS  254 (316)
T ss_pred             CccCCcCHHHH-cCCCCCchHHHHH---HHHHHHHHhhCCCCCCCCchH---H-------HH-----HHHhcCCccCCCc
Confidence            46679999983 3445677899999   888888889988875321110   0       00     0111111100001


Q ss_pred             HHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           96 LEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        96 ~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                      ......+.++..+|++.+|..||++...++.+.
T Consensus       255 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll  287 (316)
T cd05574         255 PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK  287 (316)
T ss_pred             cccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence            112345777888999999999999554444443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.76  E-value=1.8e-09  Score=78.67  Aligned_cols=104  Identities=17%  Similarity=0.110  Sum_probs=67.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||++..            |+..|+|||. ......+.++|+|+   +|+.+++..+|..+....      ..
T Consensus       139 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~-~~~~~~~~~~Dv~s---lG~~~~~l~~g~~p~~~~------~~  208 (258)
T cd08215         139 NGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPEL-CQNKPYNYKSDIWS---LGCVLYELCTLKHPFEGE------NL  208 (258)
T ss_pred             CCcEEECCccceeecccCcceecceeeeecccChhH-hccCCCCccccHHH---HHHHHHHHHcCCCCCCCC------cH
Confidence            45789999998764            5667999998 44555678899999   777788888887654221      01


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... .....     +.+..    .....+..+...|++.+|++||+..+++.
T Consensus       209 ~~~~~~~-~~~~~-----~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         209 LELALKI-LKGQY-----PPIPS----QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHH-hcCCC-----CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1111111 11111     11111    11234667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.76  E-value=1.4e-08  Score=76.16  Aligned_cols=106  Identities=16%  Similarity=0.075  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            |+.+|++||+ +.....+.++|+|+   ||+.+.+.++|..+...   ...   
T Consensus       152 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~-~~~~~~~~~~Dv~s---lGvil~el~tg~~p~~~---~~~---  221 (292)
T cd06657         152 DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL-ISRLPYGPEVDIWS---LGIMVIEMVDGEPPYFN---EPP---  221 (292)
T ss_pred             CCCEEEcccccceecccccccccccccCccccCHHH-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCC---CCH---
Confidence            45789999998753            5778999998 44555678899999   77788888888776421   100   


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. ........     +.+.+...  ......+..+..+|++.+|.+||++.+++.
T Consensus       222 ~~-~~~~~~~~-----~~~~~~~~--~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         222 LK-AMKMIRDN-----LPPKLKNL--HKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HH-HHHHHHhh-----CCcccCCc--ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            11 11111110     11111000  011123456777999999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.74  E-value=8.6e-09  Score=78.56  Aligned_cols=119  Identities=11%  Similarity=-0.030  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ++..|++||+.......+.++|+|+   ||+.+.+.+||..+........  ....+
T Consensus       144 ~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~il~el~tg~~~f~~~~~~~--~~~~~  218 (328)
T cd07856         144 NCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWS---AGCIFAEMLEGKPLFPGKDHVN--QFSII  218 (328)
T ss_pred             CCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHH---HHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence            45789999998874         5678999998333345678899999   8888888889875432111000  00000


Q ss_pred             h----------HHhhhCCCeeeeccc-cccccccH-----HHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 T----------WKLWCEGNVQELMDP-VLKESFIL-----EEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~----------~~~~~~~~~~~~~d~-~l~~~~~~-----~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .          ......+...+++.. ......+.     .....+.++...|++.+|.+||++.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         219 TDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0          000000000011000 00000011     11245677888999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.74  E-value=1.5e-08  Score=76.34  Aligned_cols=119  Identities=13%  Similarity=0.032  Sum_probs=67.8

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNENK   61 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~   61 (169)
                      +..+||+|||.+..                   ++..|+|||+.... ...+.++|+|+   ||+.+++.++|..+....
T Consensus       137 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws---~G~il~el~~g~~pf~~~  213 (314)
T cd08216         137 DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYS---VGITACELANGHVPFKDM  213 (314)
T ss_pred             CCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHH---HHHHHHHHHhCCCCCCCC
Confidence            46789999997752                   45679999983322 23457899999   888888988988775432


Q ss_pred             CCCCCcchhhhhHHh----h-------hCCCeee----eccccccc----cccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           62 LGEGGFGPVYKTWKL----W-------CEGNVQE----LMDPVLKE----SFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        62 ~~~~~~~lv~~~~~~----~-------~~~~~~~----~~d~~l~~----~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      ...  ..+.......    +       .......    ..++....    ......-..+..+...|++.+|++||++.+
T Consensus       214 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  291 (314)
T cd08216         214 PAT--QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQ  291 (314)
T ss_pred             CHH--HHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHH
Confidence            110  0011100000    0       0000000    11111100    001112235677888999999999999999


Q ss_pred             HHH
Q 041157          123 VVV  125 (169)
Q Consensus       123 V~~  125 (169)
                      +++
T Consensus       292 ll~  294 (314)
T cd08216         292 LLN  294 (314)
T ss_pred             Hhc
Confidence            876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.73  E-value=5.1e-09  Score=81.36  Aligned_cols=104  Identities=13%  Similarity=0.030  Sum_probs=67.9

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      -.+||.|||+|+.            ||+.||.||. +.......|+|+|+   +|..+-|..+-+.+...   .....|+
T Consensus       143 ~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEi-l~d~pYn~KSDiWs---LGC~~yEm~~lk~aF~a---~~m~~Li  215 (426)
T KOG0589|consen  143 KKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEI-LSDIPYNEKSDIWS---LGCCLYEMCTLKPAFKA---SNMSELI  215 (426)
T ss_pred             CceeecchhhhhhcCCchhhhheecCCCcccCHHH-hCCCCCCccCcchh---hcchHHHHHhcccccCc---cchHHHH
Confidence            4569999999996            9999999999 76788899999999   77666666654433211   1111122


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ....        ...++|.- ..+    ...+..+...|++.+|..||+..+++.+
T Consensus       216 ~ki~--------~~~~~Plp-~~y----s~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  216 LKIN--------RGLYSPLP-SMY----SSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHh--------hccCCCCC-ccc----cHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            2111        11123221 111    2234456668999999999999999754

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.72  E-value=5.3e-09  Score=79.70  Aligned_cols=117  Identities=9%  Similarity=-0.071  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC--------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE--------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +..+||+|||+++.                          ++..|+|||+..+....+.++|+|+   +|+.+++.+||.
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s---lG~~l~el~tg~  231 (335)
T PTZ00024        155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS---VGCIFAELLTGK  231 (335)
T ss_pred             CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHH---HHHHHHHHHhCC
Confidence            45789999998763                          3567999998444444578899999   888888888987


Q ss_pred             CCCCCCCCCCCcchhhhhHHhhhCCC---ee------------eeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           56 FSNENKLGEGGFGPVYKTWKLWCEGN---VQ------------ELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~~~~~~~~~~~---~~------------~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      .+....-   ................   ..            ....+.+... .......+.++...|++.+|.+||++
T Consensus       232 ~p~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~s~  307 (335)
T PTZ00024        232 PLFPGEN---EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTI-FPNASDDAIDLLQSLLKLNPLERISA  307 (335)
T ss_pred             CCCCCCC---HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHh-CcCCChHHHHHHHHHcCCCchhccCH
Confidence            6543211   1111111111110000   00            0000000000 01112456778899999999999999


Q ss_pred             HHHHH
Q 041157          121 SSVVV  125 (169)
Q Consensus       121 ~~V~~  125 (169)
                      .+++.
T Consensus       308 ~~~l~  312 (335)
T PTZ00024        308 KEALK  312 (335)
T ss_pred             HHHhc
Confidence            99986

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.71  E-value=2.6e-08  Score=76.92  Aligned_cols=40  Identities=8%  Similarity=-0.172  Sum_probs=32.0

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ||..|+|||. +.....+.++|+|+   ||+.+++.++|..+..
T Consensus       198 Gt~~Y~aPE~-~~~~~~~~~~DvwS---lGvil~ell~G~~Pf~  237 (363)
T cd05628         198 GTPDYIAPEV-FMQTGYNKLCDWWS---LGVIMYEMLIGYPPFC  237 (363)
T ss_pred             CCccccCHHH-HcCCCCCCchhhhh---hHHHHHHHHhCCCCCC
Confidence            7889999998 43445567899999   7778888899987753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=1e-08  Score=82.01  Aligned_cols=106  Identities=18%  Similarity=0.086  Sum_probs=69.0

Q ss_pred             CcccceeeeeEeecC--------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            1 ENAKQKVLQFLRSGE--------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      |+..+|++|||-+..        ||+.|||||+.+  ..+..+-++||||   +|+..|+++.++-|.-+.-   .    
T Consensus       161 e~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWS---LGITCIELAERkPPlFnMN---A----  230 (948)
T KOG0577|consen  161 EPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNMN---A----  230 (948)
T ss_pred             CCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceee---ccchhhhhhhcCCCccCch---H----
Confidence            356789999998876        999999999843  4556678899999   8888888888776642210   0    


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                        ...++.   +.+-=.|.|....-.   ..+....-.|++.-|.+|||-.+.+
T Consensus       231 --MSALYH---IAQNesPtLqs~eWS---~~F~~Fvd~CLqKipqeRptse~ll  276 (948)
T KOG0577|consen  231 --MSALYH---IAQNESPTLQSNEWS---DYFRNFVDSCLQKIPQERPTSEELL  276 (948)
T ss_pred             --HHHHHH---HHhcCCCCCCCchhH---HHHHHHHHHHHhhCcccCCcHHHHh
Confidence              111111   111123444322111   2345566689999999999987764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.71  E-value=5.9e-09  Score=80.86  Aligned_cols=55  Identities=7%  Similarity=-0.112  Sum_probs=42.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc---ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI---LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~---~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.             ||.+|+|||...+.   ...+.++|+|+   +|+.+.+.++|..+..
T Consensus       178 ~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwS---lG~ilyell~G~~Pf~  248 (370)
T cd05621         178 HGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS---VGVFLFEMLVGDTPFY  248 (370)
T ss_pred             CCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEe---ehHHHHHHHhCCCCCC
Confidence            56899999998863             78899999983322   12457899999   7777888889987753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.70  E-value=5.7e-09  Score=76.42  Aligned_cols=103  Identities=17%  Similarity=0.121  Sum_probs=61.4

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccc-----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYN-----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~-----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +|++.||+|||+|..           ||+||.|||..-.     ..-....+|.|+.|++.+.+|   .|.-+       
T Consensus       158 dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL---aGcpP-------  227 (411)
T KOG0599|consen  158 DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL---AGCPP-------  227 (411)
T ss_pred             cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH---cCCCc-------
Confidence            689999999999986           9999999997211     222356788888555544444   22222       


Q ss_pred             CCcchhhhhHH------hhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           65 GGFGPVYKTWK------LWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        65 ~~~~lv~~~~~------~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                            .|-+.      ...+|+. +.-.|.    + .+.-...-.+..+|++.+|..|-|.+|+++
T Consensus       228 ------FwHRkQmlMLR~ImeGky-qF~spe----W-adis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  228 ------FWHRKQMLMLRMIMEGKY-QFRSPE----W-ADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ------hhHHHHHHHHHHHHhccc-ccCCcc----h-hhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence                  22211      1112221 111110    1 111223445777899999999999999863

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.70  E-value=2.1e-08  Score=78.01  Aligned_cols=40  Identities=5%  Similarity=-0.238  Sum_probs=31.9

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ||..|+|||. +.....+.++|+|+   ||+.+++.+||..+..
T Consensus       210 gt~~Y~aPE~-~~~~~~~~~~DiwS---lG~il~elltG~~Pf~  249 (381)
T cd05626         210 GTPNYIAPEV-LLRKGYTQLCDWWS---VGVILFEMLVGQPPFL  249 (381)
T ss_pred             CCccccCHHH-HcCCCCCCccceee---hhhHHHHHHhCCCCCc
Confidence            7889999998 33444567899999   7778889999987753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.69  E-value=2.4e-08  Score=73.13  Aligned_cols=102  Identities=9%  Similarity=-0.064  Sum_probs=65.8

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||++..           |+..|++||+ ......+.++|+|+   +|+.+.+..+|..+.......    ..
T Consensus       136 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~~~~----~~  207 (258)
T cd05578         136 QGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEV-LCRQGYSVAVDWWS---LGVTAYECLRGKRPYRGHSRT----IR  207 (258)
T ss_pred             CCCEEEeecccccccCCCccccccCCChhhcCHHH-HcccCCCCcccchh---hHHHHHHHHhCCCCCCCCCcc----HH
Confidence            56789999998864           6678999998 44455678899999   777788888988765432211    11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      .+.......      ..+.    .+......+.++...|++.+|.+||+..
T Consensus       208 ~~~~~~~~~------~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~  248 (258)
T cd05578         208 DQIRAKQET------ADVL----YPATWSTEAIDAINKLLERDPQKRLGDN  248 (258)
T ss_pred             HHHHHHhcc------cccc----CcccCcHHHHHHHHHHccCChhHcCCcc
Confidence            111111110      0001    1111224566788899999999999993

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.68  E-value=6e-09  Score=79.17  Aligned_cols=118  Identities=11%  Similarity=-0.043  Sum_probs=68.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||++..               ++..|+|||+..+....+.++|+|+   +|+.+.+..+|..+....-..  
T Consensus       139 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s---lG~il~~l~~g~~pf~~~~~~--  213 (330)
T cd07834         139 NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWS---VGCIFAELLTRKPLFPGRDYI--  213 (330)
T ss_pred             CCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHH---HHHHHHHHHcCCCCcCCCCHH--
Confidence            56789999998875               3556999998443336778899999   887888888886543211100  


Q ss_pred             cchhhhhHHhh-----------hCCCeeeecccc-cccccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLW-----------CEGNVQELMDPV-LKESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~-----------~~~~~~~~~d~~-l~~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ..........           ......+.+... ......     .+....+.++...|++.+|.+||++.+++.
T Consensus       214 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         214 -DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             -HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence             0000000000           000000011000 000000     011235677889999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.67  E-value=1.2e-08  Score=78.11  Aligned_cols=54  Identities=7%  Similarity=-0.220  Sum_probs=41.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+|++|||+++.               ++..|+|||+.........++|+|+   ||+.+.+..+|+.+.
T Consensus       151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwS---lGvil~el~~g~~pf  219 (342)
T cd07854         151 DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA---AGCIFAEMLTGKPLF  219 (342)
T ss_pred             CceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHH---HHHHHHHHHhCCCCC
Confidence            34679999998863               4667999997343345667899999   888888888988665

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.66  E-value=4.9e-08  Score=78.90  Aligned_cols=106  Identities=13%  Similarity=0.090  Sum_probs=66.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...|++|||.+-.            ||+.|||||+..    .......++|+|+   ||+.+|+.+.+.-+... +   
T Consensus       166 dGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWS---lGITLIEMAqiEPPHhe-l---  238 (1187)
T KOG0579|consen  166 DGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWS---LGITLIEMAQIEPPHHE-L---  238 (1187)
T ss_pred             cCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHh---hhhHHHHHhccCCCccc-c---
Confidence            45689999998864            999999999832    2334567899999   88888887766544321 1   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                        . +..+.....     +---|.|...  ..--..+-.+...|+..||..||+..+++
T Consensus       239 --n-pMRVllKia-----KSePPTLlqP--S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll  287 (1187)
T KOG0579|consen  239 --N-PMRVLLKIA-----KSEPPTLLQP--SHWSRSFSDFLKRCLVKNPRNRPPAAQLL  287 (1187)
T ss_pred             --c-hHHHHHHHh-----hcCCCcccCc--chhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence              1 111111111     1112333221  11112345566789999999999999875

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.66  E-value=3.5e-09  Score=81.22  Aligned_cols=54  Identities=13%  Similarity=-0.008  Sum_probs=42.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.         ++..|+|||+..+....+.++|+|+   ||+.+++.++|+.+.
T Consensus       156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws---lG~il~el~~g~~pf  218 (345)
T cd07877         156 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS---VGCIMAELLTGRTLF  218 (345)
T ss_pred             CCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHH---HHHHHHHHHhCCCCC
Confidence            56789999999875         6788999998443345677899999   888888888987654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.65  E-value=5e-08  Score=74.77  Aligned_cols=54  Identities=11%  Similarity=-0.050  Sum_probs=42.4

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.         ++..|++||...+....+.++|+|+   +|+.+++.++|..+.
T Consensus       154 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~ll~~l~~g~~pf  216 (343)
T cd07880         154 DCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWS---VGCIMAEMLTGKPLF  216 (343)
T ss_pred             CCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHH---HHHHHHHHHhCCCCC
Confidence            46789999999875         6788999998333344678899999   888888888887654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.65  E-value=6.6e-09  Score=88.89  Aligned_cols=105  Identities=15%  Similarity=0.043  Sum_probs=65.7

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccc-cCC-ccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNIL-RGN-KKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~-~~~-~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +...|.+|||-|+.                ||..|||||...++. .+. ...|+|+   +|.++||.+||++|....-.
T Consensus      1370 ~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWs---lGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1370 NGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWS---LGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred             CCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhc---ccceEEEeecCCCchhhccc
Confidence            35679999999885                999999999844333 222 5689999   88899999999999754222


Q ss_pred             CCCcchhhhhHHhh-hCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLW-CEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +       |+.... ..|.     -|.+    +...-..--+..-+|+++||..|-+..|+++
T Consensus      1447 e-------~aIMy~V~~gh-----~Pq~----P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1447 E-------WAIMYHVAAGH-----KPQI----PERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             h-------hHHHhHHhccC-----CCCC----chhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            2       222111 1111     1111    2221111223556899999999966655543

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.63  E-value=1.1e-07  Score=73.84  Aligned_cols=55  Identities=7%  Similarity=-0.124  Sum_probs=42.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc---ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI---LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~---~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +.++||+|||+++.             ||..|+|||+..+.   ...+.++|+|+   +|+.+.+.++|..+..
T Consensus       178 ~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwS---lGvilyell~G~~Pf~  248 (371)
T cd05622         178 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS---VGVFLYEMLVGDTPFY  248 (371)
T ss_pred             CCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceee---hhHHHHHHHhCCCCCC
Confidence            56799999999863             78899999983322   12467899999   7777888889887753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=1.1e-07  Score=72.53  Aligned_cols=54  Identities=7%  Similarity=-0.098  Sum_probs=41.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.             ||.+|+|||....    ....+.++|+|+   +|+.+++.++|+.+.
T Consensus       138 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws---lG~~l~el~~g~~Pf  208 (331)
T cd05597         138 NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWS---LGVCMYEMLYGETPF  208 (331)
T ss_pred             CCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeeh---hhhHHHHHhhCCCCC
Confidence            56789999998753             7889999998332    233467899999   777788888988764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=1.4e-08  Score=74.68  Aligned_cols=104  Identities=12%  Similarity=-0.033  Sum_probs=64.4

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+.++++|+.+....     
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~-----  212 (264)
T cd06653         142 AGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV-ISGEGYGRKADVWS---VACTVVEMLTEKPPWAEY-----  212 (264)
T ss_pred             CCCEEECccccccccccccccCccccccCCcccccCHhh-hcCCCCCccccHHH---HHHHHHHHHhCCCCCCcc-----
Confidence            46789999998863               5678999998 43445677899999   888888999987764321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .............     ..+.+    +......+..+...|++ ++..||+..++..
T Consensus       213 -~~~~~~~~~~~~~-----~~~~~----p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         213 -EAMAAIFKIATQP-----TKPML----PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             -CHHHHHHHHHcCC-----CCCCC----CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence             0011111111000     11111    11222345667778888 5799999987653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.61  E-value=7.6e-08  Score=74.22  Aligned_cols=40  Identities=8%  Similarity=-0.146  Sum_probs=31.9

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ||..|+|||+ +.....+.++|+|+   ||+.+.+.++|..+..
T Consensus       201 gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~el~~G~~Pf~  240 (364)
T cd05599         201 GTPDYIAPEV-FLQTGYNKECDWWS---LGVIMYEMLVGYPPFC  240 (364)
T ss_pred             cCccccCHHH-HcCCCCCCeeeeec---chhHHHHhhcCCCCCC
Confidence            7889999998 44445578899999   7777888889887753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.60  E-value=1e-08  Score=84.31  Aligned_cols=101  Identities=18%  Similarity=0.142  Sum_probs=60.5

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      .+.|||+|||+++.               ||.||+|||. ......+..+|+|++|.   +..-.++|+..   .+|.. 
T Consensus       647 ~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~-L~~~~~~~avDiFslGC---vfyYvltgG~H---pFGd~-  718 (903)
T KOG1027|consen  647 TLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ-LREDRKTQAVDIFSLGC---VFYYVLTGGSH---PFGDS-  718 (903)
T ss_pred             ceeEEecccccccccCCCcchhhcccCCCCcccccCHHH-HhccccCcccchhhcCc---eEEEEecCCcc---CCCch-
Confidence            46899999999996               8999999998 54555566899999444   44433444322   12210 


Q ss_pred             cchhhhhHHhhhCCCee---eeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQ---ELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~---~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                               ...+.++.   .-++ .|...  .++  ...++.-.-++.+|..||+..+|+
T Consensus       719 ---------~~R~~NIl~~~~~L~-~L~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  719 ---------LERQANILTGNYTLV-HLEPL--PDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ---------HHhhhhhhcCcccee-eeccC--chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                     01111110   0000 11111  111  344566677899999999999995

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.60  E-value=1.6e-08  Score=86.11  Aligned_cols=107  Identities=16%  Similarity=0.141  Sum_probs=63.8

Q ss_pred             CcccceeeeeEeecC------------------------------CCCCCCCCCcccccc--cCCccccCCCCCCcCHHH
Q 041157            1 ENAKQKVLQFLRSGE------------------------------GRTGDDDEGYSYNIL--RGNKKVESQELPLFPLDL   48 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------------------------gt~~y~ape~~~~~~--~~~~~~dv~s~~~~~~~l   48 (169)
                      ++-.+||+|||++..                              ||.-|+|||...+..  ..+.|+|.|+   +|+++
T Consensus       732 ~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYS---LGIVl  808 (1351)
T KOG1035|consen  732 SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYS---LGIVL  808 (1351)
T ss_pred             CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHH---HHHHH
Confidence            356789999999985                              889999999944444  5789999999   55444


Q ss_pred             HHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           49 IHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        49 l~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .|..-- |...-   +    -+. +...++.+.+-.-  +.    +..+.+..-.++..+-++++|++|||..|++.
T Consensus       809 FEM~yP-F~TsM---E----Ra~-iL~~LR~g~iP~~--~~----f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  809 FEMLYP-FGTSM---E----RAS-ILTNLRKGSIPEP--AD----FFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHhcc-CCchH---H----HHH-HHHhcccCCCCCC--cc----cccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            443321 22110   0    000 1111222222111  11    12233334456677788999999999998864

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.59  E-value=3.4e-08  Score=75.11  Aligned_cols=41  Identities=5%  Similarity=-0.223  Sum_probs=31.0

Q ss_pred             CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157           16 GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus        16 gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ++..|+|||+..+. ...+.++|+|+   ||+.+++.++|..+..
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~  211 (327)
T cd08227         170 KVLPWLSPEVLQQNLQGYDAKSDIYS---VGITACELANGHVPFK  211 (327)
T ss_pred             ceecccChHHhhcccCCCCchhhHHH---HHHHHHHHHHCCCCCC
Confidence            45679999983322 34568899999   8888889999987754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.59  E-value=6.4e-08  Score=72.27  Aligned_cols=96  Identities=13%  Similarity=-0.023  Sum_probs=62.2

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         |+..|++||. ......+.++|+|+   ||+.+.+.++|..+....-      . ..
T Consensus       137 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~------~-~~  205 (290)
T cd05580         137 DGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEI-ILSKGYGKAVDWWA---LGILIYEMLAGYPPFFDDN------P-IQ  205 (290)
T ss_pred             CCCEEEeeCCCccccCCCCCCCCCCccccChhh-hcCCCCCccccHHH---HHHHHHHHHhCCCCCCCCC------H-HH
Confidence            45789999999885         6788999998 43445678899999   8888889999877643211      0 01


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP  118 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP  118 (169)
                      .......+.      ..+....    -..+.++...|++.+|.+||
T Consensus       206 ~~~~~~~~~------~~~~~~~----~~~l~~li~~~l~~~p~~R~  241 (290)
T cd05580         206 IYEKILEGK------VRFPSFF----SPDAKDLIRNLLQVDLTKRL  241 (290)
T ss_pred             HHHHHhcCC------ccCCccC----CHHHHHHHHHHccCCHHHcc
Confidence            111111111      1111111    13456777899999999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.58  E-value=1.3e-08  Score=77.75  Aligned_cols=53  Identities=11%  Similarity=-0.125  Sum_probs=44.5

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      -..||||||+||.           |++-|||||. ......+.|.|.|+   +|..+.+.++|+-+..
T Consensus       152 ~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV-~~~~~YdAKADLWS---iG~Ilyq~l~g~~Pf~  215 (429)
T KOG0595|consen  152 PVLKIADFGFARFLQPGSMAETLCGSPLYMAPEV-IMSQQYDAKADLWS---IGTILYQCLTGKPPFD  215 (429)
T ss_pred             ceEEecccchhhhCCchhHHHHhhCCccccCHHH-HHhccccchhhHHH---HHHHHHHHHhCCCCcc
Confidence            4579999999997           9999999999 55777888999999   7777778888876654

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.57  E-value=1e-08  Score=74.80  Aligned_cols=107  Identities=15%  Similarity=0.140  Sum_probs=68.2

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCccccccc-CCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILR-GNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~-~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ...|+||||++..           |-..|||||-.-.... ..-.+||||   +|+.++|.+||+||....        -
T Consensus       205 G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWS---LGITL~EvAtG~fPyr~w--------~  273 (361)
T KOG1006|consen  205 GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWS---LGITLYEVATGNFPYRKW--------D  273 (361)
T ss_pred             CCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhh---hcceEeeeecCCCCcchH--------H
Confidence            4689999998875           7789999997332333 456789999   888899999999986420        0


Q ss_pred             hhhHHhhh---CCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWC---EGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . +.+.+.   .|.- .+++....   ..+--..+....-.|+-.+.++||.-.+..+
T Consensus       274 s-vfeql~~Vv~gdp-p~l~~~~~---~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  274 S-VFEQLCQVVIGDP-PILLFDKE---CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             H-HHHHHHHHHcCCC-CeecCccc---ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            0 111111   1111 12221111   1222345667777899999999999988643

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.57  E-value=8.6e-09  Score=79.90  Aligned_cols=39  Identities=5%  Similarity=-0.228  Sum_probs=30.2

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||.+|+|||. ......+.++|+|+   ||+.+.+.++|..+.
T Consensus       206 gt~~y~aPE~-~~~~~~~~~~DiwS---lGvilyell~G~~Pf  244 (376)
T cd05598         206 GTPNYIAPEV-LLRTGYTQLCDWWS---VGVILYEMLVGQPPF  244 (376)
T ss_pred             CCccccCHHH-HcCCCCCcceeeee---ccceeeehhhCCCCC
Confidence            7889999998 44445578899999   565677777888765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.57  E-value=1.5e-07  Score=71.80  Aligned_cols=54  Identities=6%  Similarity=-0.106  Sum_probs=42.2

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.             ||..|+|||+...    ....+.++|+|+   ||+.+.+.++|+.+.
T Consensus       138 ~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwS---lGvil~ell~g~~Pf  208 (332)
T cd05623         138 NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS---LGVCMYEMLYGETPF  208 (332)
T ss_pred             CCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEe---eHHHHHHHhcCCCCC
Confidence            56789999998752             7889999998331    234567899999   777888888988775

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.57  E-value=9.2e-09  Score=79.03  Aligned_cols=104  Identities=13%  Similarity=0.031  Sum_probs=62.6

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +|.++||+||||+-.           |++-|..||..-+..+....+|.|+   +|+.+..++-|..+.+-      +..
T Consensus       188 ~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWs---LGvLLYtLVyGtMPFDG------~Dh  258 (668)
T KOG0611|consen  188 QNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWS---LGVLLYTLVYGTMPFDG------RDH  258 (668)
T ss_pred             CCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhh---HHHHHHHHhhcccccCC------chH
Confidence            478999999999986           8999999998556667778999999   44445555555554321      111


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      -..++ ....|..   ..|.-    +.    ...-+..|-+..||+.|.|+.+|..
T Consensus       259 k~lvr-QIs~GaY---rEP~~----PS----dA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  259 KRLVR-QISRGAY---REPET----PS----DASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHH-Hhhcccc---cCCCC----Cc----hHHHHHHHHHhcCcccchhHHHHhh
Confidence            11111 1112221   11111    11    1122444556678999999988864

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.55  E-value=1.6e-07  Score=71.49  Aligned_cols=104  Identities=17%  Similarity=0.037  Sum_probs=58.5

Q ss_pred             CCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhH----------------Hh---
Q 041157           17 RTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTW----------------KL---   76 (169)
Q Consensus        17 t~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~----------------~~---   76 (169)
                      +..|++||+..+. ...+.++|+|+   ||+.+.+..+|..+........  .......                ..   
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~Diws---lG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (328)
T cd08226         171 VLPWLSPELLRQDLYGYNVKSDIYS---VGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEESRMKN  245 (328)
T ss_pred             ccCccChhhhcCCCCCCCchhhHHH---HHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhhhhcc
Confidence            4569999984322 23467899999   8888888888887654321100  0000000                00   


Q ss_pred             ----hhC---------CCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           77 ----WCE---------GNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        77 ----~~~---------~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          ...         +....+.+..+...........+.++...|++.+|++||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         246 SQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             chhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                000         0000111111211112234456788999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=2e-08  Score=81.08  Aligned_cols=96  Identities=14%  Similarity=0.089  Sum_probs=62.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||||||+.+.            ||+-|||||. ......+..+|=|+   ||+.+.+.++|..|..   |+     
T Consensus       504 eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEi-l~e~~Yt~aVDWW~---lGVLlyeML~Gq~PF~---gd-----  571 (694)
T KOG0694|consen  504 EGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEV-LTEQSYTRAVDWWG---LGVLLYEMLVGESPFP---GD-----  571 (694)
T ss_pred             cCcEEecccccccccCCCCCccccccCChhhcChhh-hccCcccchhhHHH---HHHHHHHHHcCCCCCC---CC-----
Confidence            46899999999996            8999999999 55677788899999   5555666667765532   11     


Q ss_pred             hhhhHHhhhCCCeeeeccccccc--cccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKE--SFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                                 .-.++.|..+..  .|+...-...+.|...-+..+|++|--+
T Consensus       572 -----------dEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  572 -----------DEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -----------CHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence                       112333333321  1333333444555555667888888877

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.55  E-value=1.5e-08  Score=77.53  Aligned_cols=109  Identities=13%  Similarity=0.034  Sum_probs=73.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      .++.||+|-.|||.              ....||++|- ......+..+|||+   ||+.+.|+.|-+...-..++.   
T Consensus       432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEa-l~n~~yssasDvWs---fGVllWELmtlg~~PyaeIDP---  504 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEA-LQNSHYSSASDVWS---FGVLLWELMTLGKLPYAEIDP---  504 (563)
T ss_pred             heeEEeccchhccccCcccccccCCCCCCcccccCHHH-HhhhhhcchhhhHH---HHHHHHHHHhcCCCCccccCH---
Confidence            47889999999996              4578999997 44555678899999   666666666633222111111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         +.+...+.+|.       +|  ..+.+|...+..+..-||...|++||+..|++.-|..
T Consensus       505 ---fEm~~ylkdGy-------Rl--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  505 ---FEMEHYLKDGY-------RL--AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             ---HHHHHHHhccc-------ee--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence               01111222221       12  1345677788999999999999999999999988865

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.54  E-value=3e-08  Score=73.99  Aligned_cols=101  Identities=14%  Similarity=-0.007  Sum_probs=61.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             |+..|++||+... ....+.++|+|+   ||+.+.+.+||..+........  
T Consensus       141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~s---lG~~l~~ll~g~~p~~~~~~~~--  215 (290)
T cd05613         141 NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWS---MGVLMYELLTGASPFTVDGEKN--  215 (290)
T ss_pred             CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHH---HHHHHHHHhcCCCCCCcCCccc--
Confidence            56799999998764             6778999998332 123467899999   7778888889887653211110  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP  118 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP  118 (169)
                      ............       .+.    ++......+..+...|++.+|.+||
T Consensus       216 ~~~~~~~~~~~~-------~~~----~~~~~~~~~~~ll~~~l~~~p~~R~  255 (290)
T cd05613         216 SQAEISRRILKS-------EPP----YPQEMSALAKDIIQRLLMKDPKKRL  255 (290)
T ss_pred             cHHHHHHHhhcc-------CCC----CCccCCHHHHHHHHHHhcCCHHHhc
Confidence            111111111110       011    1111123456788899999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.53  E-value=4.5e-08  Score=69.11  Aligned_cols=56  Identities=20%  Similarity=0.118  Sum_probs=45.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccc---ccccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSY---NILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~---~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      +.++||||||++..           |-..|||||-.-   +..-..-++|+||   +|+.++|.++++|+..+
T Consensus       185 ~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWS---LGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  185 DGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWS---LGITMIEMAILRFPYES  254 (282)
T ss_pred             CCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhh---hhhhhhhhhhccccccc
Confidence            46789999999875           678899999722   2223467899999   88899999999999765

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.52  E-value=1.7e-07  Score=72.72  Aligned_cols=39  Identities=3%  Similarity=-0.210  Sum_probs=31.0

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||.+|+|||+ +.....+.++|+|+   +|+.+++.+||..+.
T Consensus       210 gt~~y~aPE~-~~~~~~~~~~DiwS---lGvil~elltG~~Pf  248 (377)
T cd05629         210 GTPDYIAPEI-FLQQGYGQECDWWS---LGAIMFECLIGWPPF  248 (377)
T ss_pred             CCccccCHHH-HccCCCCCceeeEe---cchhhhhhhcCCCCC
Confidence            7889999998 43445578899999   777788888888764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.51  E-value=3.7e-08  Score=76.58  Aligned_cols=39  Identities=5%  Similarity=-0.228  Sum_probs=31.2

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||..|+|||. +.....+.++|+|+   +|+.+.+.++|..+.
T Consensus       210 gt~~Y~aPE~-~~~~~~~~~~DiwS---lGvil~elltG~~Pf  248 (382)
T cd05625         210 GTPNYIAPEV-LLRTGYTQLCDWWS---VGVILYEMLVGQPPF  248 (382)
T ss_pred             cCcccCCHHH-hcCCCCCCeeeEEe---chHHHHHHHhCCCCC
Confidence            7889999998 33444567899999   777788889988765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.48  E-value=4.5e-08  Score=72.28  Aligned_cols=99  Identities=12%  Similarity=0.008  Sum_probs=63.7

Q ss_pred             cccceeeeeEeecC--------------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHH
Q 041157            2 NAKQKVLQFLRSGE--------------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll   49 (169)
                      +..+|++|||++..                                ++..|++||. ......+.++|+|+   +|+.++
T Consensus       138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~Di~s---lG~~l~  213 (280)
T cd05581         138 DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPEL-LNEKPAGKSSDLWA---LGCIIY  213 (280)
T ss_pred             CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHH-hCCCCCChhhhHHH---HHHHHH
Confidence            46789999998763                                3578999997 44555778899999   777788


Q ss_pred             HHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           50 HEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        50 ~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      +..+|..+.....   .    .........      ....+    +......+..+...|++.+|++||+..
T Consensus       214 ~l~~g~~p~~~~~---~----~~~~~~~~~------~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~  268 (280)
T cd05581         214 QMLTGKPPFRGSN---E----YLTFQKILK------LEYSF----PPNFPPDAKDLIEKLLVLDPQDRLGVN  268 (280)
T ss_pred             HHHhCCCCCCCcc---H----HHHHHHHHh------cCCCC----CCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence            8888877653211   0    000000000      00011    111123567888899999999999993

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.48  E-value=9.1e-08  Score=74.40  Aligned_cols=106  Identities=11%  Similarity=-0.033  Sum_probs=63.9

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ...|++|||++..           ||+.|+|||. .+.......+|+|+.|+..+   .+.+|..+..   ++..+....
T Consensus       176 ~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEv-l~~~~y~~~~DiWS~Gvi~y---iLL~G~~PF~---~~~~~~~~~  248 (382)
T KOG0032|consen  176 GRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEV-LGGRPYGDEVDVWSIGVILY---ILLSGVPPFW---GETEFEIFL  248 (382)
T ss_pred             CcEEEeeCCCceEccCCceEeeecCCccccCchh-hcCCCCCcccchhHHHHHHH---HHhhCCCCCc---CCChhHHHH
Confidence            4789999999986           9999999999 55567778899999555444   4445544432   111111100


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          ....++.      ......-...-..+-.+...++..+|..|++..++++
T Consensus       249 ----~i~~~~~------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  249 ----AILRGDF------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             ----HHHcCCC------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence                1111111      1111111111223344566788999999999999987

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.48  E-value=6.2e-08  Score=70.46  Aligned_cols=100  Identities=13%  Similarity=-0.117  Sum_probs=63.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||++..            ++.+|++||. ......+.++|+|+   ||+.++++.+|..+......      
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~-~~~~~~~~~~D~~s---lG~~~~~l~~g~~p~~~~~~------  198 (250)
T cd05123         129 DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEV-LLGKGYGKAVDWWS---LGVLLYEMLTGKPPFYAEDR------  198 (250)
T ss_pred             CCcEEEeecCcceecccCCCcccCCcCCccccChHH-hCCCCCCchhhHHH---HHHHHHHHHHCCCCCCCCCH------
Confidence            45789999998764            5778999998 43445677899999   77778888888766432110      


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      ..... .....      ...+..    .....+.++...|+..+|+.||++.+
T Consensus       199 ~~~~~-~~~~~------~~~~~~----~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         199 KEIYE-KILKD------PLRFPE----FLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHH-HHhcC------CCCCCC----CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            00011 10000      001111    11234567888999999999999965

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.48  E-value=7.8e-08  Score=69.85  Aligned_cols=97  Identities=11%  Similarity=-0.090  Sum_probs=61.0

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+|++|||+++.         ++..|++||+ ......+.++|+|+   +|+.+++..+|..+......         
T Consensus       121 ~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~~g~~~~~~~~~---------  187 (237)
T cd05576         121 RGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEV-GGISEETEACDWWS---LGAILFELLTGKTLVECHPS---------  187 (237)
T ss_pred             CCCEEEecccchhccccccccCCcCccccCCcc-cCCCCCCchhhHHH---HHHHHHHHHHCcchhhcCch---------
Confidence            35689999997653         4567999998 44445567899999   88888888887643211000         


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSV  123 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V  123 (169)
                         ...     ......+....    ...+..+..+|++.+|++||++.++
T Consensus       188 ---~~~-----~~~~~~~~~~~----~~~~~~li~~~l~~dp~~R~~~~~~  226 (237)
T cd05576         188 ---GIN-----THTTLNIPEWV----SEEARSLLQQLLQFNPTERLGAGVA  226 (237)
T ss_pred             ---hcc-----cccccCCcccC----CHHHHHHHHHHccCCHHHhcCCCcc
Confidence               000     00000111111    1345667788999999999998554

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.48  E-value=1.4e-07  Score=73.73  Aligned_cols=109  Identities=12%  Similarity=0.027  Sum_probs=67.0

Q ss_pred             CcccceeeeeEeecC-----------------CCCCCCCCCcccc---cccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE-----------------GRTGDDDEGYSYN---ILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------------gt~~y~ape~~~~---~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      ++.++||+|||.+..                 ||+.++|||....   .....++.|+|+   +|+.+...+-|+.+.. 
T Consensus       245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa---lGVTLYCllfG~~PF~-  320 (576)
T KOG0585|consen  245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA---LGVTLYCLLFGQLPFF-  320 (576)
T ss_pred             CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh---hhhhHHHhhhccCCcc-
Confidence            467899999999883                 9999999998322   234568899999   6666666667766632 


Q ss_pred             CCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           61 KLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        61 ~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                        ++       .....+.     +|+...|.-....+.-..+-.+.+.-+..||.+|-+..+|....
T Consensus       321 --~~-------~~~~l~~-----KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  321 --DD-------FELELFD-----KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             --cc-------hHHHHHH-----HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence              11       1222222     23333331111111122333455566678999999999986543

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.48  E-value=7e-08  Score=71.56  Aligned_cols=104  Identities=11%  Similarity=-0.005  Sum_probs=63.3

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ++..|++||+ ......+.++|+|+   +|+.+.+..+|+.+........   ..
T Consensus       131 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~~~---~~  203 (277)
T cd05577         131 HGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEV-LQGEVYDFSVDWFA---LGCTLYEMIAGRSPFRQRKEKV---EK  203 (277)
T ss_pred             CCCEEEccCcchhhhccCCccccccCCCCcCCHHH-hcCCCCCchhhhHH---HHHHHHHHhhCCCCCCCCcccc---cH
Confidence            45789999998863           5678999998 43444677899999   7777888888887653211100   00


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      .    ........  .........    -..+..+...|++.+|.+||+..+
T Consensus       204 ~----~~~~~~~~--~~~~~~~~~----~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         204 E----ELKRRTLE--MAVEYPDKF----SPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             H----HHHhcccc--ccccCCccC----CHHHHHHHHHHccCChhHccCCCc
Confidence            0    01110000  011111111    224556778999999999995555

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.47  E-value=6e-08  Score=77.38  Aligned_cols=103  Identities=15%  Similarity=0.074  Sum_probs=65.3

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ++++.||||||+|..           |+.-|.|||...+..+....+|+|+   +|++++.++.|..+.+          
T Consensus       190 ~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Ws---lgvvly~LV~GsLPFD----------  256 (596)
T KOG0586|consen  190 ENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWS---LGVVLYALVEGSLPFD----------  256 (596)
T ss_pred             cccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhh---hhhhheeeeecccccC----------
Confidence            468899999999986           8999999999677778889999999   5555665555555432          


Q ss_pred             hhhhHHhhhCCCeeeeccccccccc--cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESF--ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                               .+.+.++=++.+.+.+  +.-.-..|-++...-+-.+|..|+++.++-+
T Consensus       257 ---------G~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  257 ---------GQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ---------CcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence                     1112222222222221  0000112233433445678999999999854

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.47  E-value=2.1e-08  Score=82.72  Aligned_cols=106  Identities=14%  Similarity=0.061  Sum_probs=66.3

Q ss_pred             cceeeeeEeecC------------C--CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcc
Q 041157            4 KQKVLQFLRSGE------------G--RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFG   68 (169)
Q Consensus         4 ~~Ki~dFgls~~------------g--t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~   68 (169)
                      ..||.|||+++.            |  .+.|||=|. ......+.++|||+||+   -+.|.+| |..+....       
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~-i~~~~~thqSDVWsfGV---tiWElmTFGa~Py~gi-------  904 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALES-IRIRKYTHQSDVWSFGV---TIWELMTFGAKPYDGI-------  904 (1177)
T ss_pred             eEEEEecchhhccCcccccccccccccCcHHHHHHH-hhccCCCchhhhhhhhh---hHHHHHhcCCCccCCC-------
Confidence            579999999997            0  123444444 44667789999999555   4666666 33332211       


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+.-+...++.|.       +|  ..+..+-..+..+.+.||..+++.||++++....+..
T Consensus       905 ~~~eI~dlle~ge-------RL--sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  905 PAEEIPDLLEKGE-------RL--SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             CHHHhhHHHhccc-------cC--CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            1112222333222       12  2344455667888999999999999999999877654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.45  E-value=1.2e-07  Score=76.03  Aligned_cols=101  Identities=11%  Similarity=-0.121  Sum_probs=66.8

Q ss_pred             ccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 041157            3 AKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKT   73 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~   73 (169)
                      -+.||+|||.++.         -|..|.|||+ ......++.+|.|+   +|+.+.+.++|.-+.....+.  ..    .
T Consensus       453 g~lrltyFG~a~~~~~~~~tp~~t~~y~APEv-l~~~~yt~acD~WS---LGvlLy~ML~G~tp~~~~P~~--~e----i  522 (612)
T KOG0603|consen  453 GHLRLTYFGFWSELERSCDTPALTLQYVAPEV-LAIQEYTEACDWWS---LGVLLYEMLTGRTLFAAHPAG--IE----I  522 (612)
T ss_pred             CcEEEEEechhhhCchhhcccchhhcccChhh-hccCCCCcchhhHH---HHHHHHHHHhCCCccccCCch--HH----H
Confidence            4689999999886         3678999999 54777889999999   777777888887665332111  00    0


Q ss_pred             HHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        74 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....        -.    +.+....-...-.+.-+|++.+|.+||+|.++..
T Consensus       523 ~~~i--------~~----~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  523 HTRI--------QM----PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHhh--------cC----CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            0011        11    1111111123345667899999999999999865

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.45  E-value=1.7e-07  Score=72.28  Aligned_cols=39  Identities=8%  Similarity=-0.151  Sum_probs=29.8

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||..|+|||. +.....+.++|+|+   +|+.+.+.+||..+.
T Consensus       198 gt~~Y~APE~-~~~~~~~~~~DiwS---lGvilyel~tG~~Pf  236 (360)
T cd05627         198 GTPDYIAPEV-FMQTGYNKLCDWWS---LGVIMYEMLIGYPPF  236 (360)
T ss_pred             CCccccCHHH-HcCCCCCCcceecc---ccceeeecccCCCCC
Confidence            7889999998 43445567899999   565677777887764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.44  E-value=2.9e-08  Score=82.57  Aligned_cols=92  Identities=11%  Similarity=-0.021  Sum_probs=56.8

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeecccccccccc
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFI   95 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~   95 (169)
                      ||..|+|||+..+ ...+.++|+|+   ||+.+++.+||..+...   .   ....+....+. ..   +-.+...    
T Consensus       542 GT~~Y~APE~l~~-~~~~~~~DiwS---lG~il~ElltG~~pf~~---~---~~~~~~~~il~-~~---~~~p~~~----  603 (669)
T cd05610         542 GTPDYLAPELLLG-KPHGPAVDWWA---LGVCLFEFLTGIPPFND---E---TPQQVFQNILN-RD---IPWPEGE----  603 (669)
T ss_pred             eCccccCHHHcCC-CCCCcHHHHHH---HHHHHHHHHHCCCCCCC---C---CHHHHHHHHHh-cC---CCCCccc----
Confidence            7999999998443 44577899999   88888899998766421   1   11111111111 00   0001100    


Q ss_pred             HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           96 LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        96 ~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......+..+...|+..+|.+||++.+++.
T Consensus       604 ~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~  633 (669)
T cd05610         604 EKLSVNAQNAIEILLTMDPTKRAGLKELKQ  633 (669)
T ss_pred             ccCCHHHHHHHHHHcccChhHCcCHHHHHh
Confidence            111233556677899999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.44  E-value=5.2e-07  Score=68.83  Aligned_cols=54  Identities=6%  Similarity=-0.077  Sum_probs=41.2

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc----ccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI----LRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.             ||.+|+|||+..+.    ...+.++|+|+   ||+.+.+.++|+.+.
T Consensus       138 ~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwS---lGvil~ell~g~~Pf  208 (331)
T cd05624         138 NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS---LGVCMYEMLYGETPF  208 (331)
T ss_pred             CCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEe---eehhhhhhhhCCCCc
Confidence            45789999998753             78899999983221    23457899999   777788888988775

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=2e-07  Score=73.78  Aligned_cols=107  Identities=12%  Similarity=0.004  Sum_probs=76.9

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+|+.|||++-.           |...|-|||..++..+....+|+|+   +|+.+..+++|+-+....-         
T Consensus       156 GlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWS---LGVILyMLVCGq~PFqeAN---------  223 (864)
T KOG4717|consen  156 GLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWS---LGVILYMLVCGQPPFQEAN---------  223 (864)
T ss_pred             CceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhH---HHHHHHHHHhCCCcccccc---------
Confidence            3579999999976           8899999999888888899999999   6666667778776643211         


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                            ....+..|+|....-  +...-..|-.+...-+..+|.+|.+..+|+.  .|+.
T Consensus       224 ------DSETLTmImDCKYtv--PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  224 ------DSETLTMIMDCKYTV--PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             ------chhhhhhhhcccccC--chhhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence                  112244566665422  2333445666667778999999999999975  5555

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.32  E-value=3.3e-07  Score=65.91  Aligned_cols=103  Identities=12%  Similarity=-0.052  Sum_probs=67.7

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +...||||||++..          ||.-|.+||. ......+..+|+|+   +|+...|.+.|.-+..... .       
T Consensus       160 ~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEm-v~~~~hd~~Vd~w~---lgvl~yeflvg~ppFes~~-~-------  227 (281)
T KOG0580|consen  160 AGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEM-VEGRGHDKFVDLWS---LGVLCYEFLVGLPPFESQS-H-------  227 (281)
T ss_pred             CCCeeccCCCceeecCCCCceeeecccccCCHhh-cCCCCccchhhHHH---HHHHHHHHHhcCCchhhhh-h-------
Confidence            35679999999986          8999999998 55666678899999   5555556666665543321 1       


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ...+.+-...++.+|.-       .-..+.++...|+..+|.+|.+..||+.
T Consensus       228 --~etYkrI~k~~~~~p~~-------is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  228 --SETYKRIRKVDLKFPST-------ISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             --HHHHHHHHHccccCCcc-------cChhHHHHHHHHhccCccccccHHHHhh
Confidence              01111111223344421       1123556778999999999999999875

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.29  E-value=2e-06  Score=64.99  Aligned_cols=51  Identities=12%  Similarity=-0.053  Sum_probs=41.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      |...|||||||||.              .|.-|-|||...+....+..+|+||   .|..+-|.++|+
T Consensus       161 ~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWS---vGCI~AEmL~gk  225 (359)
T KOG0660|consen  161 DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWS---VGCILAEMLTGK  225 (359)
T ss_pred             CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhh---hhHHHHHHHcCC
Confidence            45679999999996              3567899998777778899999999   666666777765

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.27  E-value=1.3e-06  Score=63.35  Aligned_cols=49  Identities=14%  Similarity=-0.075  Sum_probs=36.7

Q ss_pred             ceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            5 QKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         5 ~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      .|+||||++..           ||++||+||. ...-.....+|+|+.|++.|   .++.|..|
T Consensus       152 vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEv-vrkdpy~kpvDiW~cGViLf---iLL~G~~P  211 (355)
T KOG0033|consen  152 VKLADFGLAIEVNDGEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILY---ILLVGYPP  211 (355)
T ss_pred             eeecccceEEEeCCccccccccCCCcccCHHH-hhcCCCCCcchhhhhhHHHH---HHHhCCCC
Confidence            59999999985           8999999999 55556667899999666544   44455444

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.27  E-value=3.3e-07  Score=69.23  Aligned_cols=54  Identities=17%  Similarity=-0.023  Sum_probs=42.9

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ++.+.|++||||++.            ||.-|||||+.. ....+..+|-|+   +|+.+.+.++|..|.
T Consensus       160 ~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~-~~gy~~~vDWWs---LGillYeML~G~pPF  225 (357)
T KOG0598|consen  160 EQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILL-GKGYDKAVDWWS---LGILLYEMLTGKPPF  225 (357)
T ss_pred             CCCcEEEeccccchhcccCCCccccccCCccccChHHHh-cCCCCcccchHh---HHHHHHHHhhCCCCC
Confidence            367899999999995            899999999944 445567789999   666677777887664

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.26  E-value=1.7e-06  Score=63.27  Aligned_cols=131  Identities=14%  Similarity=0.109  Sum_probs=73.8

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC--CCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN--FSNENKLGEGG   66 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~--~~~~~~~~~~~   66 (169)
                      ++...||||||++|.            -|.-|-|||..++....+..+|+|+   .|+.+-|++.+.  |++++.+    
T Consensus       136 ~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWa---vGCI~AELllr~P~fpG~sDi----  208 (318)
T KOG0659|consen  136 SDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWA---VGCIFAELLLRVPFFPGDSDI----  208 (318)
T ss_pred             CCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhh---HHHHHHHHHccCCCCCCCchH----
Confidence            356789999999997            3568999999889988899999999   555555554432  3332222    


Q ss_pred             cchhhhhHHhhhCC------Ceeeecc-------cc-ccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCC
Q 041157           67 FGPVYKTWKLWCEG------NVQELMD-------PV-LKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI  132 (169)
Q Consensus        67 ~~lv~~~~~~~~~~------~~~~~~d-------~~-l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~  132 (169)
                       .........+.--      .+.++-|       |. ........+....+++...-+..||..|.+..|++++=-  ..
T Consensus       209 -dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y--f~  285 (318)
T KOG0659|consen  209 -DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY--FK  285 (318)
T ss_pred             -HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchh--hh
Confidence             2222222221100      0111111       00 011111112223456666678899999999999987422  23


Q ss_pred             CCCCCCCCc
Q 041157          133 TLPQPTQPA  141 (169)
Q Consensus       133 ~~~~~~~p~  141 (169)
                      ..|.|..|.
T Consensus       286 ~~P~pt~~~  294 (318)
T KOG0659|consen  286 SLPLPTPPS  294 (318)
T ss_pred             cCCCCCChh
Confidence            344444443

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.26  E-value=4.2e-07  Score=67.66  Aligned_cols=103  Identities=13%  Similarity=0.031  Sum_probs=66.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..||++|||.+..            ||+-|||||+ ....-...+.|+|+   +|+.-+|.+.|+-+.....+-.    
T Consensus       165 ~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV-I~EIGY~~~ADIWS---LGITaIEMAEG~PPYsDIHPMR----  236 (502)
T KOG0574|consen  165 DGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV-IEEIGYDTKADIWS---LGITAIEMAEGRPPYSDIHPMR----  236 (502)
T ss_pred             cchhhhhhccccchhhhhHHhhCccccCcccccHHH-HHHhccchhhhHhh---hcchhhhhhcCCCCcccccccc----
Confidence            46799999998875            9999999999 44445567889999   7777888888876654322111    


Q ss_pred             hhhhHHhhhCCCeeeeccccccccc--cHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESF--ILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                                  ..-++-..-...+  ++.--..+-.....|+-.+|++|-|..+++
T Consensus       237 ------------AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~  281 (502)
T KOG0574|consen  237 ------------AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLC  281 (502)
T ss_pred             ------------eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHh
Confidence                        1112211111111  122223456677789999999998776654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.25  E-value=1.1e-06  Score=72.94  Aligned_cols=108  Identities=16%  Similarity=0.008  Sum_probs=69.2

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      ++..+|++|||+|..            ||+.|||||+...    ..+.+..+|+|+   +|+..||++-|.-+..+... 
T Consensus       158 ~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~Ws---LGITaIEladG~PPl~DmHP-  233 (953)
T KOG0587|consen  158 ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWS---LGITAIEMAEGAPPLCDMHP-  233 (953)
T ss_pred             ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhh---ccceeehhcCCCCCccCcch-
Confidence            356789999999985            8999999998221    223456678888   66677777777766533211 


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                              ++.++.-     .-.|-..-.-+..--.++.+....|+..+-..||+|.+.++
T Consensus       234 --------mraLF~I-----pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  234 --------MRALFLI-----PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             --------hhhhccC-----CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence                    1112110     01111111113344457788889999999999999988753

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.23  E-value=8.6e-07  Score=61.98  Aligned_cols=73  Identities=18%  Similarity=0.076  Sum_probs=56.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccc-cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNIL-RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~-~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..++|+|||.+..            +...|++||. .... ..+.+.|+|+   +|+.+++.                 
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~-~~~~~~~~~~~D~~~---lg~~~~~l-----------------  187 (215)
T cd00180         129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEV-LLGKGYYSEKSDIWS---LGVILYEL-----------------  187 (215)
T ss_pred             CCcEEEecCCceEEccCCcchhhcccCCCCccChhH-hcccCCCCchhhhHH---HHHHHHHH-----------------
Confidence            35789999998763            5678999998 3333 5667789998   66666543                 


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                                                     ..+.++...|++.+|++||++.++++.
T Consensus       188 -------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 -------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             -------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                           567788889999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.20  E-value=9.1e-07  Score=66.90  Aligned_cols=115  Identities=10%  Similarity=0.021  Sum_probs=72.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC--CCCCCCCCCCCc-
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN--FSNENKLGEGGF-   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~--~~~~~~~~~~~~-   67 (169)
                      ....||||||-|+.           =|..|-|||..++....+.+.|+||   .|.++-|.+.|+  |++     +.+. 
T Consensus       162 tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWS---aGCV~aELl~g~plFpG-----~s~~d  233 (364)
T KOG0658|consen  162 TGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWS---AGCVMAELLKGQPLFPG-----DSSVD  233 (364)
T ss_pred             CCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhh---hhHHHHHHhcCCcccCC-----CCHHH
Confidence            46789999999986           2568999999899999999999999   777777777765  332     2221 


Q ss_pred             chhhhhHHhhhC----------CCeeeecccccccc-----ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCE----------GNVQELMDPVLKES-----FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~----------~~~~~~~d~~l~~~-----~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .++..+. .+.-          .+..+.-.+.+...     .....-...+++..++++-+|.+|-+-.|++.
T Consensus       234 QL~eIik-~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  234 QLVEIIK-VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHHHHH-HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            1222221 1110          11112222222111     11122235677888999999999999988863

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.20  E-value=3.5e-07  Score=73.10  Aligned_cols=52  Identities=8%  Similarity=-0.127  Sum_probs=44.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      ++.+|+||||++|.            ||+.|||||. +........+|-|+   +|..+.|..+|+-+
T Consensus       136 ~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPEl-v~e~pyd~~sDlWs---lGcilYE~~~G~PP  199 (808)
T KOG0597|consen  136 GGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPEL-VEEQPYDHTSDLWS---LGCILYELYVGQPP  199 (808)
T ss_pred             CCceeechhhhhhhcccCceeeeeccCcccccCHHH-HcCCCccchhhHHH---HHHHHHHHhcCCCC
Confidence            57899999999995            9999999998 65667778899999   77778888887765

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.16  E-value=2.7e-06  Score=67.69  Aligned_cols=118  Identities=13%  Similarity=-0.029  Sum_probs=74.0

Q ss_pred             cccceeeeeEeecCC--------------CCCCCCCCccccc---c---cCCccccCCCCCCcCHHHHHHHHhCCCCCCC
Q 041157            2 NAKQKVLQFLRSGEG--------------RTGDDDEGYSYNI---L---RGNKKVESQELPLFPLDLIHEATRNFSNENK   61 (169)
Q Consensus         2 ~~~~Ki~dFgls~~g--------------t~~y~ape~~~~~---~---~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~   61 (169)
                      ++..||+|||+....              ..-|.|||..-..   .   ..+.+.|+|+   |++.+-|+++..-+....
T Consensus        85 ~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs---~~ii~~ei~~r~~~~~~~  161 (484)
T KOG1023|consen   85 RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYS---FGIIMYEILFRSGPFDLR  161 (484)
T ss_pred             eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeeh---HHHHHHHHHhccCccccc
Confidence            578999999998874              2468999983221   1   2577899999   766677777766554432


Q ss_pred             CCCCC-cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           62 LGEGG-FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        62 ~~~~~-~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..... ..++.++..     .....+-|.+....  +....++.+...||..+|..||++.+|-..++.
T Consensus       162 ~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  162 NLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             cccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            21111 123333221     11233444442111  222357888999999999999999999887765

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.14  E-value=1e-06  Score=68.67  Aligned_cols=54  Identities=7%  Similarity=-0.097  Sum_probs=39.2

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ++.+++|+|.|||..           ||.||||||+ ......++..|=|+   +|..+.+.+.|+.|.
T Consensus       322 d~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEv-l~ne~Y~~s~Dwf~---lGCllYemi~G~sPF  386 (591)
T KOG0986|consen  322 DHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEV-LQNEVYDFSPDWFS---LGCLLYEMIAGHSPF  386 (591)
T ss_pred             cCCCeEeeccceEEecCCCCccccccCcccccCHHH-HcCCcccCCccHHH---HHhHHHHHHcccCch
Confidence            467899999999985           8999999999 43334566666666   445556777766553

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.13  E-value=5.1e-07  Score=71.53  Aligned_cols=104  Identities=13%  Similarity=0.065  Sum_probs=67.1

Q ss_pred             CcccceeeeeEeecC-------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            1 ENAKQKVLQFLRSGE-------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +||+.||+|||-++.                         ||.-|.+||. +........+|+|+   ||+.+...+.|.
T Consensus       209 ~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPEl-L~~~~~~~~sDiWA---lGCilyQmlaG~  284 (604)
T KOG0592|consen  209 KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPEL-LNDSPAGPSSDLWA---LGCILYQMLAGQ  284 (604)
T ss_pred             CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHH-hcCCCCCcccchHH---HHHHHHHHhcCC
Confidence            589999999999885                         8899999999 66777888999999   777777777776


Q ss_pred             CCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           56 FSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      -|...   ..+ ++.      +.  +++ -+|-.....++.    .+..|..+-+..+|++|++..++-+
T Consensus       285 PPFra---~Ne-yli------Fq--kI~-~l~y~fp~~fp~----~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  285 PPFRA---ANE-YLI------FQ--KIQ-ALDYEFPEGFPE----DARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             CCCcc---ccH-HHH------HH--HHH-HhcccCCCCCCH----HHHHHHHHHHccCccccccHHHHhh
Confidence            55321   111 111      11  011 122222233332    2333444456789999999987754

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.09  E-value=1.1e-06  Score=69.15  Aligned_cols=52  Identities=10%  Similarity=-0.191  Sum_probs=44.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNF   56 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~   56 (169)
                      +.+.||+|||||+.             -|.-|-|||.+++....+..+|+|+   .|..+.|+.+|+-
T Consensus       254 ~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS---~GCIl~El~~gkP  318 (560)
T KOG0600|consen  254 NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWS---VGCILAELFLGKP  318 (560)
T ss_pred             CCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehh---hhHHHHHHHcCCC
Confidence            56889999999995             3678999999888888899999999   7777777777763

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.08  E-value=2.6e-06  Score=66.61  Aligned_cols=47  Identities=13%  Similarity=-0.055  Sum_probs=35.8

Q ss_pred             ccceeeeeEeecC-------------------CCCCCCCCCcccc---cccCCccccCCCCCCcCHHHH
Q 041157            3 AKQKVLQFLRSGE-------------------GRTGDDDEGYSYN---ILRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus         3 ~~~Ki~dFgls~~-------------------gt~~y~ape~~~~---~~~~~~~~dv~s~~~~~~~ll   49 (169)
                      ...||.||||++.                   ||+.|++||+..-   -...+-|+|||++|++.|..|
T Consensus       610 GeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl  678 (775)
T KOG1151|consen  610 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL  678 (775)
T ss_pred             ceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh
Confidence            3579999999997                   8999999998332   235578899999776655444

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.08  E-value=5.5e-06  Score=61.70  Aligned_cols=109  Identities=12%  Similarity=-0.029  Sum_probs=61.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      |-..|++|||+++.           -|+.|.|||. .+........|.|+.|   +.+..+++|--+.-.   ..+.   
T Consensus       200 na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPev-lg~eKydkscdmwSlg---VimYIlLCGyPPFYS---~hg~---  269 (400)
T KOG0604|consen  200 NAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEV-LGPEKYDKSCDMWSLG---VIMYILLCGYPPFYS---NHGL---  269 (400)
T ss_pred             CcceEecccccccccCCCccccCCcccccccCHHH-hCchhcCCCCCccchh---HHHHHhhcCCCcccc---cCCc---
Confidence            45679999999997           3689999999 6666777889999944   444444454433211   1110   


Q ss_pred             hhhHHhhhCCCeeeeccccc-cccccHHHHHHHHHHhhh-hcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVL-KESFILEEILKRIHIGLL-CVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~ia~~-C~~~~p~~RP~m~~V~~  125 (169)
                           .+..|-...|.-... -.+....++...++-..+ -+..+|.+|-|+.++..
T Consensus       270 -----aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  270 -----AISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             -----cCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence                 000000000110000 011123455555553333 45789999999999875

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.03  E-value=3.5e-06  Score=63.46  Aligned_cols=56  Identities=11%  Similarity=-0.022  Sum_probs=45.4

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      +|.+.||+||||.+.            ||+-|+|||+ +........+|=|+   +|+++.|.++|+.+.-+
T Consensus       303 kDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEV-leDnDYgraVDWWG---~GVVMYEMmCGRLPFyn  370 (516)
T KOG0690|consen  303 KDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---VGVVMYEMMCGRLPFYN  370 (516)
T ss_pred             cCCceEeeecccchhcccccceeccccCChhhcCchh-hccccccceeehhh---hhHHHHHHHhccCcccc
Confidence            367899999999986            8999999999 54555566778888   67788899999988644

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=97.98  E-value=2.8e-06  Score=62.98  Aligned_cols=52  Identities=13%  Similarity=-0.027  Sum_probs=39.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +...||.|||+|+.         ||+-|+|||. .........+|=|+   ||+.+.|.+.|.-|
T Consensus       180 ~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEi-i~sk~ynkavDWWa---lGVLIYEMlaG~pP  240 (355)
T KOG0616|consen  180 NGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEI-IQSKGYNKAVDWWA---LGVLIYEMLAGYPP  240 (355)
T ss_pred             CCcEEEEeccceEEecCcEEEecCCccccChHH-hhcCCCCcchhHHH---HHHHHHHHHcCCCC
Confidence            56789999999997         9999999999 44555567788888   55555566666544

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=97.93  E-value=1.5e-06  Score=69.17  Aligned_cols=51  Identities=10%  Similarity=0.027  Sum_probs=39.2

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ..||||||.+|.           ||+.|+|||+ +...-....-|.|++|++   +...+.|.|+.
T Consensus       705 QvKlCDFGfARiIgEksFRrsVVGTPAYLaPEV-LrnkGyNrSLDMWSVGVI---iYVsLSGTFPF  766 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEV-LRNKGYNRSLDMWSVGVI---IYVSLSGTFPF  766 (888)
T ss_pred             ceeeccccceeecchhhhhhhhcCCccccCHHH-HhhccccccccceeeeEE---EEEEecccccC
Confidence            579999999997           9999999999 545555677899996665   44445666664

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=97.92  E-value=2.6e-06  Score=64.07  Aligned_cols=117  Identities=14%  Similarity=0.057  Sum_probs=72.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC--CCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN--FSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~--~~~~~~~~~~~~   67 (169)
                      +...||||||+|+.            +|.-|-|||..++.......+|+|+   +|....|.++++  |+...     ..
T Consensus       156 ~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs---~GcIfaEm~~~~~LFpG~s-----e~  227 (323)
T KOG0594|consen  156 SGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWS---LGCIFAEMFTRRPLFPGDS-----EI  227 (323)
T ss_pred             CCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHh---HHHHHHHHHhCCCCCCCCc-----HH
Confidence            45789999999996            6788999999888888889999999   777777777754  32221     12


Q ss_pred             chhhhhHHhhhCC---C---eeeeccccc-----c-ccccHH----HHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           68 GPVYKTWKLWCEG---N---VQELMDPVL-----K-ESFILE----EILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        68 ~lv~~~~~~~~~~---~---~~~~~d~~l-----~-~~~~~~----~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      .....+.+.+..-   .   +..+.|-..     . ...-..    .....+++..+|++.+|.+|.+...++..
T Consensus       228 ~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  228 DQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            2222222222110   0   111111111     0 000000    01256778889999999999999998874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.89  E-value=2.6e-05  Score=62.99  Aligned_cols=52  Identities=8%  Similarity=-0.037  Sum_probs=36.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccc---------------------cCCccccCCCCCCcCHH
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNIL---------------------RGNKKVESQELPLFPLD   47 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~---------------------~~~~~~dv~s~~~~~~~   47 (169)
                      +..+||+|||+++.             ++..|++||......                     ....+.|+|+   +|+.
T Consensus       345 ~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwS---lGvi  421 (507)
T PLN03224        345 DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYT---AGVL  421 (507)
T ss_pred             CCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhh---HHHH
Confidence            46789999999864             257899999732110                     1123479999   7777


Q ss_pred             HHHHHHhCC
Q 041157           48 LIHEATRNF   56 (169)
Q Consensus        48 ll~~~t~~~   56 (169)
                      +++..++..
T Consensus       422 l~em~~~~l  430 (507)
T PLN03224        422 LMQMCVPEL  430 (507)
T ss_pred             HHHHHhCCC
Confidence            888888765

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.87  E-value=1.6e-05  Score=62.67  Aligned_cols=120  Identities=14%  Similarity=0.062  Sum_probs=78.4

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC----Ccc
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG----GFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~----~~~   68 (169)
                      +..+||+|||-|..         -|.-|-+||+.++.+.. ...|+||   |.....|++||.+-.+..-|++    +.+
T Consensus       390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~-~~ADiWS---~AC~~FELaTGDyLFePhsG~~Y~rDEDH  465 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYS-TSADIWS---TACMAFELATGDYLFEPHSGENYSRDEDH  465 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCC-CchhHHH---HHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence            46789999998875         68899999997766554 4579999   8888999999987655444433    112


Q ss_pred             hhhh-------hHHhhh-----------CCCeeee-------cccccccc--ccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           69 PVYK-------TWKLWC-----------EGNVQEL-------MDPVLKES--FILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        69 lv~~-------~~~~~~-----------~~~~~~~-------~d~~l~~~--~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      +..-       .+....           .|.+..|       +...|...  +..+++..+...-.--++.+|.+||+..
T Consensus       466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~  545 (590)
T KOG1290|consen  466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA  545 (590)
T ss_pred             HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence            1111       111111           1222221       11122222  3567777888877778889999999999


Q ss_pred             HHHH
Q 041157          122 SVVV  125 (169)
Q Consensus       122 ~V~~  125 (169)
                      +.++
T Consensus       546 ~cl~  549 (590)
T KOG1290|consen  546 QCLK  549 (590)
T ss_pred             HHhc
Confidence            8875

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=97.82  E-value=4.8e-06  Score=62.78  Aligned_cols=68  Identities=13%  Similarity=-0.040  Sum_probs=48.5

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ...|||||||||.            -|.-|-|||...+..+.+..+|.|+   +|..+-|.++++-   ...|+++...+
T Consensus       214 G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWS---vGCI~aE~l~~kP---lf~G~sE~dQl  287 (419)
T KOG0663|consen  214 GILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWS---VGCIFAELLTQKP---LFPGKSEIDQL  287 (419)
T ss_pred             CcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhh---HHHHHHHHHhcCC---CCCCCchHHHH
Confidence            4679999999997            3678999999888889999999999   6666666666542   11244444455


Q ss_pred             hhhHHh
Q 041157           71 YKTWKL   76 (169)
Q Consensus        71 ~~~~~~   76 (169)
                      +.+...
T Consensus       288 ~~If~l  293 (419)
T KOG0663|consen  288 DKIFKL  293 (419)
T ss_pred             HHHHHH
Confidence            554433

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=97.81  E-value=1.7e-05  Score=62.90  Aligned_cols=39  Identities=5%  Similarity=-0.233  Sum_probs=30.1

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||+-|||||+..+.+ ....+|-||   +|..+.|.+.|--|.
T Consensus       350 GTPDYiAPEVll~kg-Y~~~cDwWS---LG~ImyEmLvGyPPF  388 (550)
T KOG0605|consen  350 GTPDYIAPEVLLGKG-YGKECDWWS---LGCIMYEMLVGYPPF  388 (550)
T ss_pred             CCccccchHHHhcCC-CCccccHHH---HHHHHHHHHhCCCCC
Confidence            899999999955433 567899999   777777777776554

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=97.81  E-value=3.8e-05  Score=62.05  Aligned_cols=48  Identities=15%  Similarity=-0.065  Sum_probs=39.4

Q ss_pred             ccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh
Q 041157            3 AKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR   54 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~   54 (169)
                      ...||.|||.|..         -+.-|-|||..+ ......+.|+||   +|..+.|+.||
T Consensus       328 ~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVIL-GlpY~~~IDmWS---LGCIlAEL~tG  384 (586)
T KOG0667|consen  328 SRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVIL-GLPYDTAIDMWS---LGCILAELFTG  384 (586)
T ss_pred             CceeEEecccccccCCcceeeeeccccccchhhc-cCCCCCccceee---hhhhHHhHhcC
Confidence            3689999999987         457899999955 556677899999   77778888887

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.75  E-value=5.4e-06  Score=63.26  Aligned_cols=42  Identities=10%  Similarity=-0.035  Sum_probs=33.1

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLF   44 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~   44 (169)
                      +...||.|||-|..         .|..|-|||..+ ..--+..+||||+|.+
T Consensus       248 s~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL-gLGwS~pCDvWSiGCI  298 (415)
T KOG0671|consen  248 STAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL-GLGWSQPCDVWSIGCI  298 (415)
T ss_pred             CcceEEEecCCcceeccCcceeeeccccCCchhee-ccCcCCccCceeeeeE
Confidence            56789999999886         688999999944 4445677999995543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.73  E-value=1.8e-05  Score=65.11  Aligned_cols=110  Identities=12%  Similarity=-0.021  Sum_probs=67.1

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...||+|||.+.-                |+.+|+|||+..+......-.|+|+   -+++++..++++++......+.
T Consensus       456 ~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS---~~ii~~~m~~~~~~Wk~a~~~~  532 (601)
T KOG0590|consen  456 NGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWS---CGIIYICMILGRFPWKVAKKSD  532 (601)
T ss_pred             CCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhh---ccceEEEEecCCCccccccccc
Confidence            34789999998764                7889999999666667778899999   5556777778888765433322


Q ss_pred             CcchhhhhHHhhhCC-Ceeeeccccccccc--cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEG-NVQELMDPVLKESF--ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~-~~~~~~d~~l~~~~--~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...       ..... ....+..    +..  ..........+.-+-++.+|.+|-+|.+|++
T Consensus       533 ~~~-------~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  533 NSF-------KTNNYSDQRNIFE----GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cch-------hhhcccccccccc----ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            111       00000 0000000    000  0111223344445557999999999999986

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=2.1e-05  Score=61.12  Aligned_cols=52  Identities=15%  Similarity=0.025  Sum_probs=38.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +.+.||+|||+.+.            ||+.|+|||. .........+|=|+   ||+.+.|.+.|.-+
T Consensus       486 eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEI-i~YqPYgksvDWWa---~GVLLyEmlaGQpP  549 (683)
T KOG0696|consen  486 EGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEI-IAYQPYGKSVDWWA---FGVLLYEMLAGQPP  549 (683)
T ss_pred             CCceEeeecccccccccCCcceeeecCCCcccccce-EEecccccchhHHH---HHHHHHHHHcCCCC
Confidence            46789999999986            8999999998 44555567788899   44445555555544

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=97.71  E-value=3.9e-05  Score=41.48  Aligned_cols=39  Identities=54%  Similarity=0.781  Sum_probs=30.6

Q ss_pred             CCCCCCCCCCcccccccC---CCCC-C---cccccccceeccccCC
Q 041157          131 TITLPQPTQPAFSVGRVK---SSSD-L---KVCSANEVTLSTLLPR  169 (169)
Q Consensus       131 ~~~~~~~~~p~~~~~~~~---~~~~-~---~~~s~~~~~~s~~~~r  169 (169)
                      ...||.|+.|+|+..+..   .+++ .   ..+|+|++++|.|+||
T Consensus         3 ~~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    3 TATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             cccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            567999999999877665   2222 1   4689999999999998

; GO: 0004674 protein serine/threonine kinase activity

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.70  E-value=4.8e-06  Score=61.40  Aligned_cols=43  Identities=12%  Similarity=-0.069  Sum_probs=36.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLF   44 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~   44 (169)
                      |...|||||||+|.             -|-.|-|||...+....+..+|+|++|.+
T Consensus       192 NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCI  247 (449)
T KOG0664|consen  192 NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCI  247 (449)
T ss_pred             CceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHH
Confidence            56789999999996             36789999998888888999999996554

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.65  E-value=1.4e-05  Score=63.53  Aligned_cols=52  Identities=12%  Similarity=0.002  Sum_probs=39.8

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      .=+|+-|||+++.           ||+-|.|||..++. -....+|-|+   +|+.+.|++||.-|.
T Consensus       557 Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnK-GHD~avDyWa---LGIli~ELL~G~pPF  619 (732)
T KOG0614|consen  557 GYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNK-GHDRAVDYWA---LGILIYELLTGSPPF  619 (732)
T ss_pred             CceEEeehhhHHHhccCCceeeecCCcccccchhhhcc-CcchhhHHHH---HHHHHHHHHcCCCCC
Confidence            4579999999996           89999999985433 3356788999   666677778887553

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.64  E-value=2.1e-05  Score=58.07  Aligned_cols=111  Identities=14%  Similarity=0.088  Sum_probs=67.0

Q ss_pred             Ccccceee----eeEeecCC---CCCCCCCCcccccc--cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            1 ENAKQKVL----QFLRSGEG---RTGDDDEGYSYNIL--RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         1 ~~~~~Ki~----dFgls~~g---t~~y~ape~~~~~~--~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      |+++|||+    .|.+...|   .+.||+||-..+..  ..-...|.|+   |.+.+.|+.|+..+.....         
T Consensus       326 edltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmws---faillwel~trevpfadls---------  393 (448)
T KOG0195|consen  326 EDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWS---FAILLWELNTREVPFADLS---------  393 (448)
T ss_pred             chhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHH---HHHHHHHhhccccccccCC---------
Confidence            46777776    34433333   57899999733221  2235678888   7666777777766542211         


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          ..+-  -+++.-..|+...+......+.++..-|.+.+|.+||.+..|+-.|+.
T Consensus       394 ----pmec--gmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilek  445 (448)
T KOG0195|consen  394 ----PMEC--GMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK  445 (448)
T ss_pred             ----chhh--hhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence                1111  112222233333333334456677778999999999999999988875

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.64  E-value=2.5e-05  Score=63.92  Aligned_cols=55  Identities=20%  Similarity=0.116  Sum_probs=46.4

Q ss_pred             ceeeeeEeecC-----------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            5 QKVLQFLRSGE-----------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         5 ~Ki~dFgls~~-----------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      =||+|||.||.           ||.-|.+||. +. ....+..+|-||   ||+.+.+.+||.+|.....+
T Consensus       163 yKLtDfG~Arel~d~s~~~S~vGT~~YLhPel-~E~q~~y~~tVDLWS---~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNSLFTSLVGTEEYLHPEL-YERQKKYTATVDLWS---FGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             EeeecccccccCCCCCeeeeecCchhhcChHH-HhhccCcCceeehhh---hhhHHHHHhccCCCCCcCCC
Confidence            39999999996           9999999998 54 477788899999   88889999999999765443

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.64  E-value=2.5e-05  Score=57.05  Aligned_cols=50  Identities=8%  Similarity=-0.158  Sum_probs=39.3

Q ss_pred             cccceeeeeEeecC----------C------CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh
Q 041157            2 NAKQKVLQFLRSGE----------G------RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR   54 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------g------t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~   54 (169)
                      +...||||||++|.          +      |..|.+||...+....+...|+|+   -|..+-+.-|+
T Consensus       160 dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWg---AgCimaeMwtr  225 (376)
T KOG0669|consen  160 DGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWG---AGCIMAEMWTR  225 (376)
T ss_pred             CceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHh---HHHHHHHHHcc
Confidence            45789999999975          3      788999999888888889999999   55555454443

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.53  E-value=9.8e-05  Score=54.57  Aligned_cols=113  Identities=15%  Similarity=0.120  Sum_probs=65.7

Q ss_pred             cccceeeeeEeecC-C--------CCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-G--------RTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-g--------t~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ..+.|+||||+++. |        +..|-+||...    .........|+|.   ||+.+..-+||++|....--   ..
T Consensus       159 f~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~Wq---fGIi~f~cltG~~PWQka~~---~d  232 (378)
T KOG1345|consen  159 FYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQ---FGIIFFYCLTGKFPWQKASI---MD  232 (378)
T ss_pred             ccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchh---eeeeeeeeecCCCcchhhhc---cC
Confidence            45789999999987 3        45788888721    1223456789999   44445566799998863222   24


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ..||-|..|.+++...  -|+.-..+..+ +.+|.   .+-+.+++++|=-+.++-++
T Consensus       233 ~~Y~~~~~w~~rk~~~--~P~~F~~fs~~-a~r~F---kk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  233 KPYWEWEQWLKRKNPA--LPKKFNPFSEK-ALRLF---KKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             chHHHHHHHhcccCcc--CchhhcccCHH-HHHHH---HHhcCCcccccchhHHHHHH
Confidence            5777787887665431  12221222222 22222   23456667777555555443

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=97.36  E-value=2.9e-05  Score=58.29  Aligned_cols=43  Identities=5%  Similarity=-0.106  Sum_probs=37.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLF   44 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~   44 (169)
                      ...+||+|||++|.               -|.-|-|||..++....+..+|+|++|.+
T Consensus       172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCI  229 (438)
T KOG0666|consen  172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCI  229 (438)
T ss_pred             cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHH
Confidence            46789999999997               47789999998889999999999995443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.31  E-value=5.2e-05  Score=60.17  Aligned_cols=45  Identities=18%  Similarity=0.046  Sum_probs=35.7

Q ss_pred             cceeeeeEeecC------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHH
Q 041157            4 KQKVLQFLRSGE------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus         4 ~~Ki~dFgls~~------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll   49 (169)
                      ..||.|||+...                  ||..||+||= +.......++|+|++|++.++++
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ-i~g~~y~~kvdIyaLGlil~EL~  456 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQ-IRGQQYSEKVDIYALGLILAELL  456 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHH-HhhhhhhhhcchhhHHHHHHHHH
Confidence            579999998654                  8999999997 55566789999999666666555

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.15  E-value=9.6e-05  Score=63.58  Aligned_cols=48  Identities=10%  Similarity=0.056  Sum_probs=37.6

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc----ccCCccccCCCCCCcCHHHH
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI----LRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~----~~~~~~~dv~s~~~~~~~ll   49 (169)
                      +.+.|+||||-.-.             ||+-|++||.....    +.....+|=|++|+|.|++|
T Consensus       211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl  275 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML  275 (1317)
T ss_pred             cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence            46889999995543             99999999984422    34457899999899888877

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.03  E-value=0.00028  Score=53.13  Aligned_cols=50  Identities=8%  Similarity=-0.110  Sum_probs=38.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +...||.|||+++.           .|..|-|||..++.+ .+..+|+|+   .|+.+=|.++|.
T Consensus       154 ~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS---vGci~gEli~~~  214 (369)
T KOG0665|consen  154 DCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS---VGCIMGELILGT  214 (369)
T ss_pred             hhheeeccchhhcccCcccccCchhheeeccCchheeccC-Ccccchhhh---hhhHHHHHhhce
Confidence            35689999999997           467899999967555 889999999   555444555554

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.96  E-value=0.0013  Score=54.07  Aligned_cols=39  Identities=5%  Similarity=-0.239  Sum_probs=26.9

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||..|+|||+....+ .+-..|=|+   .|+.+.+.+.|+-+.
T Consensus       833 gt~nyiapevl~r~g-~~q~cdwws---~gvil~em~~g~~pf  871 (1034)
T KOG0608|consen  833 GTPNYIAPEVLARTG-YTQLCDWWS---VGVILYEMLVGQPPF  871 (1034)
T ss_pred             CCCcccChHHhcccC-ccccchhhH---hhHHHHHHhhCCCCc
Confidence            899999999944333 344578888   555566667776654

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=96.70  E-value=0.00085  Score=47.54  Aligned_cols=54  Identities=9%  Similarity=-0.194  Sum_probs=40.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||++..             ++..|++||........+.++|+|+   ||+.+++.++|+.+.
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~---lG~~~~~l~~g~~pf  200 (225)
T smart00221      134 DGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS---LGVILYELLWGPEPF  200 (225)
T ss_pred             CCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHH---HHHHHHHHHHCCCCc
Confidence            36789999997774             4456999998323444556899999   787888888887664

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.70  E-value=0.00079  Score=47.04  Aligned_cols=53  Identities=8%  Similarity=-0.112  Sum_probs=41.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      |.+.|++|||++|.            -|.-|-+|.+.++..-.+...|.|+   -|...-|++..+++
T Consensus       137 ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmws---agcifaelanagrp  201 (292)
T KOG0662|consen  137 NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS---AGCIFAELANAGRP  201 (292)
T ss_pred             CCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhh---cchHHHHHhhcCCC
Confidence            67889999999996            4678999998788777788899999   55555565554444

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=96.62  E-value=0.00037  Score=56.39  Aligned_cols=48  Identities=13%  Similarity=0.030  Sum_probs=37.6

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHH
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll   49 (169)
                      |.-+|+.|||-+..          ||.+|.|||..-+..+....-|+|+.|++.|.++
T Consensus       706 ~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytiv  763 (772)
T KOG1152|consen  706 NGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIV  763 (772)
T ss_pred             CCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEE
Confidence            56789999997764          9999999999656666677889999776655433

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.00086  Score=51.15  Aligned_cols=55  Identities=7%  Similarity=-0.088  Sum_probs=41.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      ..+.|+.|+|..+.            ||+.|+|||. ++.....+.+|=|+   +|+.+.|.+.|+.+.+.
T Consensus       387 eghikltdygmcke~l~~gd~tstfcgtpnyiapei-lrgeeygfsvdwwa---lgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  387 EGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEI-LRGEEYGFSVDWWA---LGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             CCceeecccchhhcCCCCCcccccccCCCcccchhh-hcccccCceehHHH---HHHHHHHHHcCCCCcce
Confidence            35789999999885            8999999998 54555566777777   55556677778776543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.01  E-value=0.0058  Score=50.48  Aligned_cols=42  Identities=14%  Similarity=-0.054  Sum_probs=31.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccccc--ccCCccccCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNI--LRGNKKVESQELPL   43 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~--~~~~~~~dv~s~~~   43 (169)
                      +...|++|||.+-.            ||..|||||++.-.  +-....+|+|+.|+
T Consensus       148 ~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gi  203 (829)
T KOG0576|consen  148 EGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGI  203 (829)
T ss_pred             cCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhccccccccccccccc
Confidence            45789999997764            99999999984322  23356789999553

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=95.09  E-value=0.0084  Score=48.95  Aligned_cols=51  Identities=14%  Similarity=-0.009  Sum_probs=37.4

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +.++|+.|||+++.        ||.-|||||. .+  -.....|-|+||+   ...+.+||..+.
T Consensus       133 ~Ghi~~tdfglske~v~~~~~cgt~eymApEI-~~--gh~~a~D~ws~gv---l~felltg~~pf  191 (612)
T KOG0603|consen  133 EGHIKLTDFGLSKEAVKEKIACGTYEYRAPEI-IN--GHLSAADWWSFGV---LAFELLTGTLPF  191 (612)
T ss_pred             cCccccCCchhhhHhHhhhhcccchhhhhhHh-hh--ccCCcccchhhhh---hHHHHhhCCCCC
Confidence            46789999999997        6999999998 32  3456678899444   455666665543

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=94.71  E-value=0.011  Score=46.15  Aligned_cols=40  Identities=13%  Similarity=0.149  Sum_probs=32.9

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||.||-|||..+.....+.++|+|+.|+   .+|-.++++++.
T Consensus       239 GT~GfRaPEvL~k~~~QttaiDiws~GV---I~Lslls~~~PF  278 (418)
T KOG1167|consen  239 GTPGFRAPEVLFRCPRQTTAIDIWSAGV---ILLSLLSRRYPF  278 (418)
T ss_pred             CCCCCCchHHHhhccCcCCccceeeccc---eeehhhcccccc
Confidence            9999999999888888999999999555   466666776654

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=94.68  E-value=0.0041  Score=50.11  Aligned_cols=50  Identities=10%  Similarity=-0.106  Sum_probs=34.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      ....||||||-|..          -+.-|-|||..+ ........|.|++|   +.+.|+-||+
T Consensus       573 k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiL-G~~yd~~iD~WSvg---ctLYElYtGk  632 (752)
T KOG0670|consen  573 KNILKLCDFGSASFASENEITPYLVSRFYRAPEIIL-GLPYDYPIDTWSVG---CTLYELYTGK  632 (752)
T ss_pred             cceeeeccCccccccccccccHHHHHHhccCcceee-cCcccCCccceeec---eeeEEeeccc
Confidence            35689999998876          234799999844 44556778999944   4444544544

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=94.50  E-value=0.024  Score=43.27  Aligned_cols=51  Identities=10%  Similarity=-0.052  Sum_probs=34.8

Q ss_pred             ceeeeeEeecC-------------------CCCCCCCCCcc--c--ccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            5 QKVLQFLRSGE-------------------GRTGDDDEGYS--Y--NILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         5 ~Ki~dFgls~~-------------------gt~~y~ape~~--~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      .|||||-|..-                   |+.-|||||+.  +  ......+..|-||   +|+.+...+.|.-+.
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwS---LGvIlYImLsGYpPF  291 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWS---LGVILYIMLSGYPPF  291 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHH---HHHHHHHHHhCCCCc
Confidence            59999977653                   67789999972  1  2334567899999   555555555665443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=93.88  E-value=0.13  Score=37.75  Aligned_cols=115  Identities=15%  Similarity=0.018  Sum_probs=64.2

Q ss_pred             cceeeeeEeecC------------------CCCCCCCCCccccc--ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE------------------GRTGDDDEGYSYNI--LRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         4 ~~Ki~dFgls~~------------------gt~~y~ape~~~~~--~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      .+|++|||.++.                  |+..|++||.....  .......|+|+   +|+.+.+..++..+......
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s---~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWS---LGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHH---HHHHHHHHHhCCCCCCCCCc
Confidence            479999998761                  77899999983332  56778899998   66666677777766221110


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .   ................ .................+..+...|+..+|..|.++.+...
T Consensus       217 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         217 S---SATSQTLKIILELPTP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             c---ccHHHHHHHHHhcCCc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            0   0011111111111100 00001100000112234566777788889999999998765

>PRK09188 serine/threonine protein kinase; Provisional

Probab=92.59  E-value=0.065  Score=41.81  Aligned_cols=24  Identities=8%  Similarity=0.087  Sum_probs=19.4

Q ss_pred             cccceeeeeEeecC--------------------CCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------------GRTGDDDEGY   25 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------gt~~y~ape~   25 (169)
                      +.++||+|||+++.                    ++..|.+||+
T Consensus       148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~  191 (365)
T PRK09188        148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDA  191 (365)
T ss_pred             CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCccc
Confidence            45789999999984                    4566889988

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=92.46  E-value=0.026  Score=49.12  Aligned_cols=51  Identities=14%  Similarity=-0.027  Sum_probs=34.5

Q ss_pred             ccceeeeeEeecC---------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            3 AKQKVLQFLRSGE---------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      .+.|+.||||++.                           ||+-|+|||+....++++ -+|=|+   +|+.+.+-..|.
T Consensus       180 GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygk-pvdwwa---mGiIlyeFLVgc  255 (1205)
T KOG0606|consen  180 GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGK-PVDWWA---MGIILYEFLVGC  255 (1205)
T ss_pred             ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCC-CccHHH---HHHHHHHHheee
Confidence            4679999999986                           899999999966555655 366677   333333444444


Q ss_pred             CC
Q 041157           56 FS   57 (169)
Q Consensus        56 ~~   57 (169)
                      .+
T Consensus       256 vp  257 (1205)
T KOG0606|consen  256 VP  257 (1205)
T ss_pred             ee
Confidence            33

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.27  E-value=0.34  Score=36.99  Aligned_cols=111  Identities=13%  Similarity=-0.037  Sum_probs=62.1

Q ss_pred             ccceeeeeEeec--C--------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            3 AKQKVLQFLRSG--E--------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         3 ~~~Ki~dFgls~--~--------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      ....|.|||+++  .                    ||..|.++.. -.........|..+   +.|.+++...|..+...
T Consensus       164 ~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~-H~~~e~~r~DDles---~~Y~l~el~~g~LPW~~  239 (322)
T KOG1164|consen  164 RTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINV-HLGIEQGRRDDLES---LFYMLLELLKGSLPWEA  239 (322)
T ss_pred             ceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHH-hCCCccCCchhhhh---HHHHHHHHhcCCCCCcc
Confidence            356889999998  2                    5555666554 22445567788888   88999998888866532


Q ss_pred             CCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           61 KLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        61 ~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .-....   ........    ....... + .....   ..+.++...+-..+-..+|.-..+...|+.
T Consensus       240 ~~~~~~---~~~~~~~~----~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~  296 (322)
T KOG1164|consen  240 LEMTDL---KSKFEKDP----RKLLTDR-F-GDLKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKD  296 (322)
T ss_pred             ccccch---HHHHHHHh----hhhcccc-c-cCCCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence            211110   11110000    0011111 1 11112   234444445555788999999999887755

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=91.71  E-value=0.037  Score=43.35  Aligned_cols=33  Identities=9%  Similarity=0.023  Sum_probs=24.5

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHH
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLI   49 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll   49 (169)
                      ||--|+|||. ....-....+|=|.||+|.|++|
T Consensus       297 GThEYlAPEv-I~G~GHgsAVDWWtfGIflYEmL  329 (459)
T KOG0610|consen  297 GTHEYLAPEV-IRGEGHGSAVDWWTFGIFLYEML  329 (459)
T ss_pred             ccccccccee-eecCCCCchhhHHHHHHHHHHHH
Confidence            8999999999 43333456789999777766655

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=90.61  E-value=0.15  Score=43.05  Aligned_cols=39  Identities=13%  Similarity=0.008  Sum_probs=28.4

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQE   40 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s   40 (169)
                      +..+||+|||+++.            +|..|++||-.+....+....++++
T Consensus       140 ~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s  190 (669)
T cd05610         140 EGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISS  190 (669)
T ss_pred             CCCEEEEeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeee
Confidence            46789999999984            6788999986444444555566666

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=90.28  E-value=0.26  Score=38.04  Aligned_cols=38  Identities=8%  Similarity=-0.030  Sum_probs=27.2

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..||-+||+ -.....+..+|+|.   ||+.-|+.+.+...
T Consensus       244 ~~~g~~a~~s-g~~tn~~~a~dIy~---fgmcAlemailEiq  281 (458)
T KOG1266|consen  244 SLPGFSAPES-GTTTNTTGASDIYK---FGMCALEMAILEIQ  281 (458)
T ss_pred             cCCccccCCc-Ccccccccchhhhh---hhHHHHHHHHheec
Confidence            5679999998 33455667899999   77777776655443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=89.88  E-value=0.15  Score=42.42  Aligned_cols=57  Identities=11%  Similarity=-0.049  Sum_probs=42.8

Q ss_pred             cceeeeeEeecC---------------C-CCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE---------------G-RTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         4 ~~Ki~dFgls~~---------------g-t~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      ..|++|||+|..               | +.-|+|||+..+........|+|+   .|+.+....+|..+......
T Consensus       163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S---~g~~l~~~~~g~~p~~~~~~  235 (601)
T KOG0590|consen  163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWS---LGIVLSAMLTGELPWDFPSR  235 (601)
T ss_pred             cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccc---ccccccccccCCCCcccccc
Confidence            678999998875               7 889999999555456678899999   56566766677766654443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=87.31  E-value=0.19  Score=37.91  Aligned_cols=56  Identities=4%  Similarity=-0.210  Sum_probs=34.8

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccc-------cccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYN-------ILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~-------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      +...+++||+....         .+.+|.+||....       ....+.+.|+|.   +|+.+..+-++..|...
T Consensus       181 ~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~---LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  181 DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ---LGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH---HHHHHHHHHHSS-STCC
T ss_pred             CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHH---HHHHHHHHHHccCCCCC
Confidence            56678888864443         3567899987322       235678899999   88889988898887643

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=81.67  E-value=2  Score=38.52  Aligned_cols=96  Identities=10%  Similarity=-0.077  Sum_probs=55.1

Q ss_pred             CCCCCCCCCccccc----------ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeee
Q 041157           16 GRTGDDDEGYSYNI----------LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQEL   85 (169)
Q Consensus        16 gt~~y~ape~~~~~----------~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~   85 (169)
                      ....|+|||-....          ...+.+-|+|+   .|.++.|+.+.+.+.-        .+....  .++.+. ...
T Consensus       189 RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS---~GCViaELf~Eg~PlF--------~LSQL~--aYr~~~-~~~  254 (1431)
T KOG1240|consen  189 RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFS---AGCVIAELFLEGRPLF--------TLSQLL--AYRSGN-ADD  254 (1431)
T ss_pred             ceeeecChHhhhccccccccCCcccccChhhhhhh---hhHHHHHHHhcCCCcc--------cHHHHH--hHhccC-ccC
Confidence            45789999952221          11467789999   8888888888766642        222211  222221 010


Q ss_pred             ccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           86 MDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        86 ~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....|+...+.    .+..+.+.-++.+|+.|-+..+.++.-.+
T Consensus       255 ~e~~Le~Ied~----~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  255 PEQLLEKIEDV----SLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             HHHHHHhCcCc----cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence            11111110011    23445566779999999999999887665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	169
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-04
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 77  WCEGNVQE-----LMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT 131
           W +G ++E     L+D  L+ ++  EE+ + I + LLC Q  P +RP MS VV ML  D 
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
Query: 132 IT 133
           + 
Sbjct: 319 LA 320

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 77  WCEGNVQE-----LMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT 131
           W +G ++E     L+D  L+ ++  EE+ + I + LLC Q  P +RP MS VV ML  D 
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
Query: 132 IT 133
           + 
Sbjct: 311 LA 312

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-17
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-10
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-14
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-09
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-09
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-06

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 54  RNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQED 113
           R F       +     +     L  E  ++ L+D  L+ ++  EE+ + I + LLC Q  
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292

Query: 114 PADRPTMSSVVVMLATDTI 132
           P +RP MS VV ML  D +
Sbjct: 293 PMERPKMSEVVRMLEGDGL 311

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 8/45 (17%)

Query: 36 VESQELP--------LFPLDLIHEATRNFSNENKLGEGGFGPVYK 72
          V ++E P         F L  +  A+ NFSN+N LG GGFG VYK
Sbjct: 4  VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYK 48

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 74  WKLWCE-GNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI 132
            ++  E   +++ +D  +        +     +   C+ E    RP +  V  +L   T 
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306

Query: 133 T 133
           +
Sbjct: 307 S 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 52.9 bits (128), Expect = 5e-09
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 35 KVESQELPLFPLDLIHEATRNFSNE------NKLGEGGFGPVYKTW 74
          +V       F    +   T NF         NK+GEGGFG VYK +
Sbjct: 6  EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGY 51

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 59.5 bits (145), Expect = 3e-11
 Identities = 13/49 (26%), Positives = 24/49 (48%)

Query: 79  EGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
            G +++++DP L +    E + K     + C+     DRP+M  V+  L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 44 FPLDLIHEATRNFSNENKLGEGGFGPVYK 72
           PL  + EAT NF ++  +G G FG VYK
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYK 57

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 8/49 (16%), Positives = 16/49 (32%), Gaps = 1/49 (2%)

Query: 82  VQELMDPVLKESFILEEILKRI-HIGLLCVQEDPADRPTMSSVVVMLAT 129
           V +   PVL++ +     +  +      C   D   R +   V   +  
Sbjct: 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 5/29 (17%), Positives = 10/29 (34%)

Query: 44 FPLDLIHEATRNFSNENKLGEGGFGPVYK 72
             + ++  +           G FG V+K
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWK 42

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 2/62 (3%)

Query: 82  VQELMDPVLKESFILEEILKRIHIGLL--CVQEDPADRPTMSSVVVMLATDTITLPQPTQ 139
            +E   P   E++    +  R     +  C  +D   R T       +A   +   +   
Sbjct: 266 SREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS 325

Query: 140 PA 141
            +
Sbjct: 326 VS 327

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.79
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.77
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.76
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.73
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.73
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.69
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.66
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.61
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.54
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.52
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.49
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.48
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.45
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.45
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.45
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.44
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.44
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.43
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.43
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.41
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.41
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.41
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.41
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.38
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.38
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.38
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.38
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.38
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.38
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.38
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.37
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.37
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.36
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.36
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.36
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.36
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.36
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.36
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.35
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.35
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.35
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.35
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.34
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.34
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.34
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.34
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.34
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.33
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.33
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.33
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.33
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.33
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.32
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.32
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.32
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.31
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.3
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.3
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.3
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.3
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.29
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.29
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.29
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.29
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.29
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.29
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.29
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.28
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.28
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.27
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.27
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.26
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.26
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.26
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.26
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.25
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.25
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.25
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.25
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.25
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.25
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.24
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.24
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.24
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.24
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.24
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.24
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.24
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.23
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.23
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.23
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.23
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.23
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.22
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.22
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.22
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.22
3niz_A	311	Rhodanese family protein; structural genomics, str	99.21
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.21
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.21
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.21
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.2
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.2
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.2
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.2
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.2
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.2
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.19
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.19
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.19
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.18
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.18
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.18
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.18
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.18
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.17
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.17
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.16
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.16
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.16
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.16
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.16
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.16
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.15
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.14
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.14
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.13
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.13
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.13
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.12
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.12
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.11
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.11
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.11
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.1
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.1
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.1
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.1
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.1
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.1
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.08
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.08
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.05
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.03
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.03
3bhy_A	283	Death-associated protein kinase 3; death associate	99.03
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.03
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.03
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.03
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.03
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.02
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.02
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.02
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.01
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.99
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.99
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.98
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.98
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.98
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.94
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.93
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.9
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.89
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.88
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.86
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.8
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.8
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.79
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.73
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.44
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.09
3uqc_A	286	Probable conserved transmembrane protein; structur	97.55
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.14
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	95.01

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.79  E-value=1.7e-21  Score=146.00  Aligned_cols=109  Identities=9%  Similarity=-0.094  Sum_probs=77.7

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +++++||+|||+|+.              ||.+|||||+ +.....+.++||||   ||+.+.|.+| |..|....    
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~-l~~~~~s~ksDVwS---fGvvl~El~t~g~~Pf~~~----  251 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEA-IMYGKFSIDSDIWS---YGVVLWEVFSYGLQPYCGY----  251 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCTTTTC----
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHH-HhCCCCCccchhhh---HHHHHHHHHhCCCCCCCCC----
Confidence            368999999999984              7789999998 55667789999999   8888999998 55553211    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .... +......+....         .+.++...+.+++..||+.+|.+||+|.||++.|+.
T Consensus       252 --~~~~-~~~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          252 --SNQD-VVEMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             --CHHH-HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             --CHHH-HHHHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence              1111 111222222111         122233457789999999999999999999999987

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=3.1e-20  Score=138.97  Aligned_cols=120  Identities=12%  Similarity=-0.004  Sum_probs=80.8

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +++++||+|||+|+.              ||+.|||||+...  ....+.++||||   ||+.++|.+||+.|....-  
T Consensus       167 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS---~Gvvl~Elltg~~Pf~~~~--  241 (307)
T 3omv_A          167 EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS---YGIVLYELMTGELPYSHIN--  241 (307)
T ss_dssp             TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHH---HHHHHHHHHHSSCTTTTCC--
T ss_pred             CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHh---HHHHHHHHHHCCCCCCCCC--
Confidence            468899999999974              8999999998322  224578999999   8888999999988753211  


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITL  134 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~~~  134 (169)
                          ...........+.    ..|.+.. ...++...+.+++..|++.+|.+||+|.+|++.|+....++
T Consensus       242 ----~~~~~~~~~~~~~----~~p~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          242 ----NRDQIIFMVGRGY----ASPDLSK-LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             ----CHHHHHHHHHTTC----CCCCSTT-SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             ----hHHHHHHHHhcCC----CCCCccc-ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence                1111222222221    2222211 11223345678889999999999999999999887643433

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.77  E-value=1.5e-20  Score=140.61  Aligned_cols=122  Identities=14%  Similarity=0.076  Sum_probs=79.6

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCccccc-----ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGYSYNI-----LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~-----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +++++||+|||+|+.                ||..|||||+..+.     ...+.++||||   ||+.++|.+||..+..
T Consensus       143 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS---~Gvvl~El~tg~~~~~  219 (303)
T 3hmm_A          143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA---MGLVFWEIARRCSIGG  219 (303)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHH---HHHHHHHHHHTBCBTT
T ss_pred             CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhh---HHHHHHHHHHCCCCCC
Confidence            468999999999863                89999999983321     13457899999   8888999999865432


Q ss_pred             CCCCCC-Cc-c------hhhhhHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           60 NKLGEG-GF-G------PVYKTWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        60 ~~~~~~-~~-~------lv~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...... .+ .      ..........    .+.++|.+.... ..++...+.+++..||+.+|.+||||.||++.|+.
T Consensus       220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          220 IHEDYQLPYYDLVPSDPSVEEMRKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             BCCCCCCTTTTTSCSSCCHHHHHHHHT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccccccchhcccccchHHHHHHHHh----cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            211100 00 0      0011111111    122334442222 23566778899999999999999999999999875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.76  E-value=1.3e-20  Score=142.43  Aligned_cols=109  Identities=13%  Similarity=-0.052  Sum_probs=74.2

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +++++||+|||+|+.              ||..|||||+ +.....+.++||||   ||+.++|.+| |+.|....    
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~-~~~~~~~~~sDvwS---~Gvvl~Ellt~G~~Pf~~~----  264 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES-ILYRKFTTESDVWS---FGVVLWEIFTYGKQPWYQL----  264 (329)
T ss_dssp             TTTEEEECCCC----------------CCCCGGGCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHTTSCCTTCSS----
T ss_pred             CCCcEEEcccccceeccCCCcceecCcccccccccChhh-hcCCCCCccccccc---hHHHHHHHHcCCCCCCCCC----
Confidence            468899999999984              7889999998 55666789999999   8888999998 66654321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... .+......+...     .    .+..+...+.+++..||+.+|++||+|.||++.|+.
T Consensus       265 --~~~-~~~~~i~~g~~~-----~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~  316 (329)
T 4aoj_A          265 --SNT-EAIDCITQGREL-----E----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA  316 (329)
T ss_dssp             --CHH-HHHHHHHHTCCC-----C----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred             --CHH-HHHHHHHcCCCC-----C----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence              111 111122222110     1    111223456788899999999999999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.73  E-value=1.9e-20  Score=139.79  Aligned_cols=109  Identities=14%  Similarity=-0.012  Sum_probs=77.4

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +++++||+|||+|+.              ||..|||||+ +.....+.++||||   ||+.+.|.+| |+.|....    
T Consensus       163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~-~~~~~~~~k~DVwS---~Gvvl~Ellt~G~~Pf~~~----  234 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES-IMYRKFTTESDVWS---LGVVLWEIFTYGKQPWYQL----  234 (299)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCTTTTS----
T ss_pred             CCCcEEECCcccceecCCCCceeecCceecChhhcCHHH-HcCCCCCchhhHHH---HHHHHHHHHcCCCCCCCCC----
Confidence            368899999999974              7889999998 55667789999999   8888999998 66654321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... .+......+....         .+..+...+.+++..||+.+|++||+|.+|++.|+.
T Consensus       235 --~~~-~~~~~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~  286 (299)
T 4asz_A          235 --SNN-EVIECITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN  286 (299)
T ss_dssp             --CHH-HHHHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CHH-HHHHHHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence              111 1111222222111         112223457788999999999999999999999986

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.73  E-value=4.5e-20  Score=140.65  Aligned_cols=110  Identities=15%  Similarity=-0.022  Sum_probs=76.1

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +++++||||||+|+.              ||..|||||+ +.....+.++||||   ||+.+.|.+| |..|....    
T Consensus       220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~-l~~~~y~~ksDVwS---~Gv~l~El~t~G~~Pf~~~----  291 (353)
T 4ase_A          220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IFDRVYTIQSDVWS---FGVLLWEIFSLGASPYPGV----  291 (353)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTSCCSSTTC----
T ss_pred             CCCCEEECcchhhhhcccCCCceeeccccccccccCHHH-HhcCCCCCcccEee---hHHHHHHHHhCCCCCCCCC----
Confidence            368899999999984              6789999998 44566789999999   8888888888 66554321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .....+......+....     .    +..+...+.++...||+.+|.+||||.+|++.|+.
T Consensus       292 --~~~~~~~~~i~~g~~~~-----~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          292 --KIDEEFCRRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             --CCSHHHHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHcCCCCC-----C----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence              11111222222222111     1    11122346778889999999999999999998865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.69  E-value=1.4e-17  Score=124.96  Aligned_cols=124  Identities=21%  Similarity=0.213  Sum_probs=101.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||..|+|||. ......+.++|+|+   ||+.+++.+||+.+..........
T Consensus       175 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~g~~p~~~~~~~~~~  250 (321)
T 2qkw_B          175 NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEY-FIKGRLTEKSDVYS---FGVVLFEVLCARSAIVQSLPREMV  250 (321)
T ss_dssp             TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHH-HHHCBCCTHHHHHH---HHHHHHHHHHCCTTCSCSSSSSCC
T ss_pred             CCCEEEeecccccccccccccccccccCCCccccCHHH-hcCCCCCcccchHh---HHHHHHHHHhCCCcccccCcHHHH
Confidence            56899999998863              6789999998 44556678999999   888899999999877655555555


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ....|.......+.+.+++++.+......+....+.++...|++.+|.+||++.+|++.|+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  312 (321)
T 2qkw_B          251 NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY  312 (321)
T ss_dssp             CHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            66777766666666777888887766677888889999999999999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.66  E-value=1.4e-17  Score=124.90  Aligned_cols=124  Identities=23%  Similarity=0.269  Sum_probs=100.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCC--CCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENK--LGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~--~~~~~   66 (169)
                      +..+||+|||+++.             ||.+|+|||. ......+.++|+|+   +|+.+++.+||..+....  .....
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~~~~~~  245 (326)
T 3uim_A          170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY-LSTGKSSEKTDVFG---YGVMLLELITGQRAFDLARLANDDD  245 (326)
T ss_dssp             TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHH-HHHSEECHHHHHHH---HHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred             CCCEEeccCccccccCcccccccccccCCcCccCHHH-hccCCCCccccchh---HHHHHHHHHhCCCcccccccccccc
Confidence            56899999999873             7899999998 44555688999999   888899999998776421  12333


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+..|............+++..+...........+.+++..|++.+|.+||++.+|++.|++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            456667666666666677888888777788888999999999999999999999999999987

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.61  E-value=2.9e-16  Score=116.58  Aligned_cols=105  Identities=11%  Similarity=0.135  Sum_probs=71.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.++||+|||+|+.          ||+.|||||. +. ...+.++|+||   ||+.+.+.+||+.|.....     .. .
T Consensus       168 ~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~-~~-~~y~~~~DiwS---lGvilyelltg~~Pf~~~~-----~~-~  236 (290)
T 3fpq_A          168 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM-YE-EKYDESVDVYA---FGMCMLEMATSEYPYSECQ-----NA-A  236 (290)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGG-GG-TCCCTHHHHHH---HHHHHHHHHHSSCTTTTCS-----SH-H
T ss_pred             CCCEEEEeCcCCEeCCCCccCCcccCccccCHHH-cC-CCCCcHHHHHH---HHHHHHHHHHCCCCCCCCC-----cH-H
Confidence            57899999999985          9999999998 43 34678999999   8888999999998753210     11 1


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+..    .+.+....+    ..+..+...|++.+|.+|||+.|+++
T Consensus       237 ~~~~~i~~~~~----~~~~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          237 QIYRRVTSGVK----PASFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHTTTCC----CGGGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCC----CCCCCccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111211111    011111111    23566788999999999999999875

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.54  E-value=2.5e-16  Score=119.05  Aligned_cols=120  Identities=10%  Similarity=-0.043  Sum_probs=77.5

Q ss_pred             cceeeeeEeecC-----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE-----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      ++||+|||+|+.                 ||+.|||||. +.....+.++|+|+   +|+.+.+.+||..|......   
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~-~~~~~y~~~~DiwS---lGvilyemltG~~Pf~~~~~---  261 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-VMGKPCDAKVDIWS---SCCMMLHMLNGCHPWTQYFR---  261 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSSTTTCC---
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHH-HCCCCCCcHHHHHH---HHHHHHHHHHCcCCCCCCCH---
Confidence            599999999973                 8999999998 43455678999999   88889999999987642111   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCCc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD---TITLPQPTQPA  141 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~---~~~~~~~~~p~  141 (169)
                      ..+...+   .....  ..  ..+....    ...+.++...|++.+|.+|||+.|+++.|...   ...+..|+...
T Consensus       262 ~~~~~~i---~~~~~--~~--~~~~~~~----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          262 GPLCLKI---ASEPP--PI--REIPPSC----APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             SCCHHHH---HHSCC--GG--GGSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             HHHHHHH---HcCCC--Cc--hhcCccC----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence            1111111   11100  00  0111112    23456677899999999999999998776542   23344555443

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.52  E-value=3.7e-16  Score=118.67  Aligned_cols=105  Identities=14%  Similarity=0.094  Sum_probs=72.7

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++.++||+|||+|+.            ||..|||||. +.....+.++|+|+   +|+.+.+.+||+.+...   .   .
T Consensus       160 ~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~-l~~~~y~~~~DiwS---lGvilyemltG~~PF~~---~---~  229 (350)
T 4b9d_A          160 KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKPYNNKSDIWA---LGCVLYELCTLKHAFEA---G---S  229 (350)
T ss_dssp             TTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCSCCC---S---S
T ss_pred             CCCCEEEcccccceeecCCcccccccCCCccccCHHH-HCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCC---c---C
Confidence            357899999999986            9999999998 44455678999999   88889999999887532   1   1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......... +..     +.+....+    ..+..+...|++.+|.+||++.|+++
T Consensus       230 ~~~~~~~i~~-~~~-----~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          230 MKNLVLKIIS-GSF-----PPVSLHYS----YDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHHHH-TCC-----CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHc-CCC-----CCCCccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2221221111 111     01111122    23566788999999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.49  E-value=8.2e-16  Score=113.35  Aligned_cols=105  Identities=13%  Similarity=0.069  Sum_probs=68.7

Q ss_pred             CcccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            1 ENAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ++.++||+|||+|+.           ||+.|||||...+....+.++|+||   +|+.+.+.+||+.+....      ..
T Consensus       147 ~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwS---lGvily~lltg~~PF~~~------~~  217 (275)
T 3hyh_A          147 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS---CGVILYVMLCRRLPFDDE------SI  217 (275)
T ss_dssp             TTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHH---HHHHHHHHHHCCCCCCCC------CH
Confidence            357899999999985           8999999998444444567899999   888899999999875321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ... ......+..      .+....+    ..+..+...|++.+|.+|||+.|+++
T Consensus       218 ~~~-~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          218 PVL-FKNISNGVY------TLPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHH-HHHHHHTCC------CCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHH-HHHHHcCCC------CCCCCCC----HHHHHHHHHHccCChhHCcCHHHHHc
Confidence            111 111111111      1111112    23556778999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.48  E-value=8.7e-15  Score=111.02  Aligned_cols=107  Identities=17%  Similarity=0.118  Sum_probs=71.6

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++.++||+|||+|+.            ||+.|||||. +.....+.++|+||   +|+.+.+.++|..+...   ..   
T Consensus       205 ~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEv-l~~~~y~~~~DiWS---lGvilyeml~G~~PF~~---~~---  274 (346)
T 4fih_A          205 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL-ISRLPYGPEVDIWS---LGIMVIEMVDGEPPYFN---EP---  274 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCTTTT---SC---
T ss_pred             CCCCEEEecCcCceecCCCCCcccccccCcCcCCHHH-HCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCC---cC---
Confidence            357899999999874            8999999998 54555678999999   88889999999887532   11   


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ... .......+     ..+.+..  ....-..+..+...|++.+|.+||++.|+++
T Consensus       275 ~~~-~~~~i~~~-----~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          275 PLK-AMKMIRDN-----LPPRLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHH-HHHHHHHS-----SCCCCSC--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHH-HHHHHHcC-----CCCCCCc--cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111 11111111     1111111  0111123556778999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.45  E-value=5.4e-15  Score=110.96  Aligned_cols=121  Identities=12%  Similarity=0.017  Sum_probs=77.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCccccc----ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNI----LRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +..+||+|||+++.              ||..|+|||...+.    ...+.++|+|+   ||+.+++.+||+.+......
T Consensus       167 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws---lG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA---MGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHH---HHHHHHHHHTTBTTSSSCCC
T ss_pred             CCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHH---HHHHHHHHHhCCCCCCCCcc
Confidence            56899999999853              78999999983321    23456789999   88889999999877643322


Q ss_pred             CCCcchhhh---------hHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           64 EGGFGPVYK---------TWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        64 ~~~~~lv~~---------~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+...         ........    ...+.+.... ...+...+.++...|++.+|.+||++.+|++.|+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  315 (322)
T 3soc_A          244 EYMLPFEEEIGQHPSLEDMQEVVVHK----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ  315 (322)
T ss_dssp             CCCCTTHHHHCSSCCHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhccchhhhhccCCchhhhhhhhhcc----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            211111100         00000011    1111221111 22445668889999999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.45  E-value=2.2e-15  Score=112.66  Aligned_cols=110  Identities=17%  Similarity=0.054  Sum_probs=71.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   ||+.+++.+||..+.....      .
T Consensus       175 ~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~elltg~~Pf~~~~------~  244 (309)
T 3p86_A          175 KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-LRDEPSNEKSDVYS---FGVILWELATLQQPWGNLN------P  244 (309)
T ss_dssp             TCCEEECCCC-----------------CCTTSCHHH-HTTCCCCTTHHHHH---HHHHHHHHHHCCCTTTTSC------H
T ss_pred             CCcEEECCCCCCccccccccccccCCCCccccChhh-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC------H
Confidence            56899999999864            7899999998 44555678899999   8888999999987753211      1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .............     ..+....+    ..+.++...|++.+|.+||++.++++.|+..
T Consensus       245 ~~~~~~~~~~~~~-----~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          245 AQVVAAVGFKCKR-----LEIPRNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             HHHHHHHHHSCCC-----CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-----CCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1111111001110     01111122    3466788899999999999999999999873

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.45  E-value=5.8e-15  Score=109.29  Aligned_cols=119  Identities=16%  Similarity=0.104  Sum_probs=74.7

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccc-----cCCccccCCCCCCcCHHHHHHHHhCCC---
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNIL-----RGNKKVESQELPLFPLDLIHEATRNFS---   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~-----~~~~~~dv~s~~~~~~~ll~~~t~~~~---   57 (169)
                      +..+||+|||+++.                ||..|+|||...+..     ..+.++|+|+   ||+.+++.+||..+   
T Consensus       149 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws---lG~il~el~tg~~~~~~  225 (301)
T 3q4u_A          149 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWA---FGLVLWEVARRMVSNGI  225 (301)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHH---HHHHHHHHHTTBCBTTB
T ss_pred             CCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHH---HHHHHHHHHhhhcCccc
Confidence            56899999998852                788999999833221     2336899999   88889999998332   


Q ss_pred             -------CCCCCCCCCcchhhhhHHhhhCCCeeeecccccccc-ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           58 -------NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKES-FILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        58 -------~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                             ......... .. .........    ....+.+... ........+.++...|++.+|.+||++.+|++.|+.
T Consensus       226 ~~~~~~pf~~~~~~~~-~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          226 VEDYKPPFYDVVPNDP-SF-EDMRKVVCV----DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             CCCCCCTTTTTSCSSC-CH-HHHHHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccccccccccCCCCc-ch-hhhhHHHhc----cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence                   211111110 00 001111110    0111111111 123455678889999999999999999999999975

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.44  E-value=1.2e-15  Score=114.76  Aligned_cols=108  Identities=8%  Similarity=-0.042  Sum_probs=73.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              +|.+|+|||+ ......+.++|+|+   ||+.+++.+| |..+......   
T Consensus       153 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~~~---  225 (327)
T 3poz_A          153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES-ILHRIYTHQSDVWS---YGVTVWELMTFGSKPYDGIPA---  225 (327)
T ss_dssp             TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTCCG---
T ss_pred             CCCEEEccCcceeEccCCcccccccCCCccccccChHH-hccCCCCchhhhhh---hHHHHHHHHhcCCCCccCCCH---
Confidence            46799999999874              4668999998 44566788999999   8888999999 7766432111   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+..         ...+......+..+...|++.+|.+||+|.++++.|+.
T Consensus       226 ----~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  275 (327)
T 3poz_A          226 ----SEISSILEKGER---------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             ----GGHHHHHHTTCC---------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHH
T ss_pred             ----HHHHHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                011111111110         00111122356788899999999999999999998875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.44  E-value=6.3e-15  Score=112.35  Aligned_cols=118  Identities=12%  Similarity=0.025  Sum_probs=80.0

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.+++.+||..+.....
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDA-HNGVAPSRRGDLEI---LGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSCCTTGGGT
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHH-hCCCCCCchhhHHH---HHHHHHHHHhCCCCccccc
Confidence            56789999999953                   8899999998 44555788999999   8888999999988765322


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..  ...+.+....+. ..+.+++++.+....   ....+..+...|++.+|.+||++.++++.|+.
T Consensus       266 ~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          266 KD--PKYVRDSKIRYR-ENIASLMDKCFPAAN---APGEIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             TC--HHHHHHHHHHHH-HCHHHHHHHHSCTTC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             cC--HHHHHHHHHHhh-hhHHHHHHHhccccc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            11  111111111111 123334444332111   12356678889999999999999999998875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.43  E-value=2.9e-14  Score=110.72  Aligned_cols=104  Identities=17%  Similarity=0.119  Sum_probs=71.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+|+.            ||..|||||. +.....+.++|+|+   +|+.+.+.++|..+...   ..   .
T Consensus       283 ~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEv-l~~~~y~~~~DiWS---lGvilyeml~G~~PF~~---~~---~  352 (423)
T 4fie_A          283 DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL-ISRLPYGPEVDIWS---LGIMVIEMVDGEPPYFN---EP---P  352 (423)
T ss_dssp             TCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCTTTT---SC---H
T ss_pred             CCCEEEecCccceECCCCCccccccccCcCcCCHHH-HCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCC---cC---H
Confidence            57899999999874            8999999998 54555678999999   88889999999887532   11   1


Q ss_pred             hhhhHHhhhCCCeeeecccccc--ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLK--ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. +......+     ..+.+.  ...+    ..+..+...|++.+|.+||++.|+++
T Consensus       353 ~~-~~~~i~~~-----~~~~~~~~~~~s----~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          353 LK-AMKMIRDN-----LPPRLKNLHKVS----PSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HH-HHHHHHHS-----CCCCCSCTTSSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HH-HHHHHHcC-----CCCCCcccccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11 11111111     111111  1112    23556778999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.43  E-value=6.4e-15  Score=109.89  Aligned_cols=102  Identities=17%  Similarity=0.044  Sum_probs=62.6

Q ss_pred             cccceeeeeEeecC------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +.++||+|||+|+.                        ||+.|||||. +.....+.++|+||   +|+.+.+.++ .|.
T Consensus       154 ~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~-~~~~~y~~~~DiwS---lGvilyell~-Pf~  228 (299)
T 4g31_A          154 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ-IHGNSYSHKVDIFS---LGLILFELLY-PFS  228 (299)
T ss_dssp             TCCEEECCCCCC--------------------------CCCTTSCHHH-HTTCCCCTHHHHHH---HHHHHHHHHS-CCS
T ss_pred             CCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHH-HcCCCCCCHHHHHH---HHHHHHHHcc-CCC
Confidence            56899999999873                        8999999998 44455678999999   6666666664 221


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .       ...... ..........     +.+    ..........+...|++.+|.+||++.|+++
T Consensus       229 ~-------~~~~~~-~~~~~~~~~~-----p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          229 T-------QMERVR-TLTDVRNLKF-----PPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             S-------HHHHHH-HHHHHHTTCC-----CHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C-------ccHHHH-HHHHHhcCCC-----CCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1       000000 0001111111     000    1111223456778999999999999999876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.41  E-value=8.1e-15  Score=109.44  Aligned_cols=103  Identities=12%  Similarity=0.063  Sum_probs=69.0

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++.++||+|||+|+.            ||+.|||||. +.....+.++|+||   +|+.+.+.+||..|...   .   .
T Consensus       161 ~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~-~~~~~y~~~~DiwS---lGvilyemltG~~PF~~---~---~  230 (304)
T 3ubd_A          161 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWS---FGVLMFEMLTGTLPFQG---K---D  230 (304)
T ss_dssp             TTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHH-HHTSCCCTHHHHHH---HHHHHHHHHHSSCSSCC---S---S
T ss_pred             CCCCEEecccccceeccCCCccccccccCcccCCHHH-hccCCCCCCCcccc---hHHHHHHHHhCCCCCCC---c---C
Confidence            356899999999984            8999999998 44555678999999   88888899999887532   1   1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVV  124 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~  124 (169)
                      .......... +..      .+....+    ..+..+...|++.+|.+||+     +.|+.
T Consensus       231 ~~~~~~~i~~-~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~ta~~~~~~eil  280 (304)
T 3ubd_A          231 RKETMTMILK-AKL------GMPQFLS----PEAQSLLRMLFKRNPANRLGAGPDGVEEIK  280 (304)
T ss_dssp             HHHHHHHHHH-CCC------CCCTTSC----HHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred             HHHHHHHHHc-CCC------CCCCcCC----HHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence            1111111111 111      1111122    23566778999999999998     45654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.41  E-value=5e-15  Score=113.53  Aligned_cols=108  Identities=15%  Similarity=0.040  Sum_probs=67.9

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++.+|+|||+ ......+.++|+|+   ||+.+++.++ |..+....    
T Consensus       183 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~S---lG~il~ellt~g~~P~~~~----  254 (373)
T 2qol_A          183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS---YGIVLWEVMSYGERPYWEM----  254 (373)
T ss_dssp             TCCEEECCC----------------------CTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTC-CTTTTC----
T ss_pred             CCCEEECcCccccccccCCccceeccCCCcCCCccChhh-hccCCcCchhcHHH---HHHHHHHHHhCCCCCCCCC----
Confidence            57899999999875               3457999998 44556778999999   8888888887 66654221    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... ........+         .....+......+.++...|++.+|.+||+|.+|++.|+.
T Consensus       255 --~~~-~~~~~i~~~---------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~  306 (373)
T 2qol_A          255 --SNQ-DVIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK  306 (373)
T ss_dssp             --CHH-HHHHHHHTT---------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CHH-HHHHHHHcC---------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence              001 111111111         1011111223457788999999999999999999999876

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=8.7e-14  Score=104.46  Aligned_cols=118  Identities=16%  Similarity=0.083  Sum_probs=74.1

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCc------cccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNK------KVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~------~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.                ||..|+|||... ......      ++|+|+   ||+.+++.+||..+..
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~~~Diws---lG~il~el~tg~~~~~  253 (337)
T 3mdy_A          178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYS---FGLILWEVARRCVSGG  253 (337)
T ss_dssp             TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHT-TCCCTTCTHHHHHHHHHH---HHHHHHHHHTTBCBTT
T ss_pred             CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcc-cccCCccccCccccchHH---HHHHHHHHHhccCccc
Confidence            56899999998852                788999999833 222222      489999   8888999999954331


Q ss_pred             ----------CCCCCCCcchhhhhHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           60 ----------NKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        60 ----------~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                                .......  ...........    ....+.+.... ..++...+.++...|++.+|.+||++.+|++.|+
T Consensus       254 ~~~~~~~p~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  327 (337)
T 3mdy_A          254 IVEEYQLPYHDLVPSDP--SYEDMREIVCI----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA  327 (337)
T ss_dssp             BCCCCCCTTTTTSCSSC--CHHHHHHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ccccccccHhhhcCCCC--chhhhHHHHhh----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence                      1111100  00001111111    11122221111 2356677889999999999999999999999997


Q ss_pred             c
Q 041157          129 T  129 (169)
Q Consensus       129 ~  129 (169)
                      .
T Consensus       328 ~  328 (337)
T 3mdy_A          328 K  328 (337)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.41  E-value=1e-13  Score=103.00  Aligned_cols=120  Identities=13%  Similarity=0.072  Sum_probs=83.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||..|+|||...  ...+.++|+|+   +|+.+++.++|..+.......  .
T Consensus       169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~~~~--~  241 (307)
T 2nru_A          169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR--GEITPKSDIYS---FGVVLLEIITGLPAVDEHREP--Q  241 (307)
T ss_dssp             TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT--TEECTHHHHHH---HHHHHHHHHHCCCSBCTTBSS--S
T ss_pred             CCcEEEeecccccccccccccccccccCCCcCcCChHHhc--CCCCccchhHH---HHHHHHHHHHCCCCcccCcch--H
Confidence            56899999998753              688999999732  23567899999   888899999997765432211  1


Q ss_pred             chhhhhHHhhh-CCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWC-EGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+..+...... ...+.+.+++.+.. ........+..+...|++.+|.+||++.+|++.|+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~  303 (307)
T 2nru_A          242 LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE  303 (307)
T ss_dssp             BTTHHHHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            12222221111 12233445555432 345666788899999999999999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.38  E-value=1.3e-14  Score=113.84  Aligned_cols=111  Identities=15%  Similarity=-0.021  Sum_probs=74.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+....      
T Consensus       316 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvws---lG~~l~el~t~g~~P~~~~------  385 (452)
T 1fmk_A          316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELTTKGRVPYPGM------  385 (452)
T ss_dssp             GGCEEECCCCTTC--------------CCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCSSTTC------
T ss_pred             CCCEEECCCccceecCCCceecccCCcccccccCHhH-HhcCCCCccccHHh---HHHHHHHHHhCCCCCCCCC------
Confidence            56899999999874             4567999998 44556788999999   8888889998 66554211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI  132 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~  132 (169)
                      ... ........+...         ..+..+...+.++...|++.+|.+||++.++++.|+....
T Consensus       386 ~~~-~~~~~i~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          386 VNR-EVLDQVERGYRM---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CHH-HHHHHHHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CHH-HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            111 111122222110         0111222456778899999999999999999999998443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.38  E-value=1.1e-14  Score=111.40  Aligned_cols=108  Identities=15%  Similarity=-0.013  Sum_probs=73.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              +|..|+|||. +.....+.++|+|+   ||+.+++.+| |..+....     
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Dvws---lG~il~ellt~g~~p~~~~-----  309 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGVLMWEIFTLGGSPYPGI-----  309 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHH-HHTCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhH-hcCCCCCcHHHHHH---HHHHHHHHHcCCCCCCCCC-----
Confidence            56899999999873              4567999998 44556678999999   8888889898 66554221     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .. .........+...     ..    +..+...+..+...|++.+|.+||++.++++.|+.
T Consensus       310 -~~-~~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~  361 (370)
T 2psq_A          310 -PV-EELFKLLKEGHRM-----DK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  361 (370)
T ss_dssp             -CG-GGHHHHHHTTCCC-----CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CH-HHHHHHHhcCCCC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             01 1111122222111     11    11122356778889999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.38  E-value=2.3e-14  Score=106.87  Aligned_cols=110  Identities=16%  Similarity=0.194  Sum_probs=72.7

Q ss_pred             cceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhH
Q 041157            4 KQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTW   74 (169)
Q Consensus         4 ~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~   74 (169)
                      .+||+|||+++.         ||..|+|||. ......+.++|+|+   ||+.+++.+||+.+.......    .....+
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~~~~----~~~~~~  215 (307)
T 2eva_A          144 VLKICDFGTACDIQTHMTNNKGSAAWMAPEV-FEGSNYSEKCDVFS---WGIILWEVITRRKPFDEIGGP----AFRIMW  215 (307)
T ss_dssp             EEEECCCCC------------CCTTSSCHHH-HTCCCCCTHHHHHH---HHHHHHHHHHTCCTTTTTCSS----HHHHHH
T ss_pred             EEEEcccccccccccccccCCCCCceEChhh-hCCCCCCcHHHHHH---HHHHHHHHHHCCCCchhhCcc----HHHHHH
Confidence            379999999864         8899999998 44556678999999   888899999998775321111    111111


Q ss_pred             HhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCC
Q 041157           75 KLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT  131 (169)
Q Consensus        75 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~  131 (169)
                      .. ..+...     .+....+    ..+.++...|++.+|.+||++.++++.|+...
T Consensus       216 ~~-~~~~~~-----~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          216 AV-HNGTRP-----PLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             HH-HTTCCC-----CCBTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             HH-hcCCCC-----CcccccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            11 111111     1111122    34667888999999999999999999998643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.38  E-value=1.7e-14  Score=107.53  Aligned_cols=110  Identities=20%  Similarity=0.120  Sum_probs=73.7

Q ss_pred             cccceeeeeEeecC--------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE--------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +..+||+|||+++.                          ||..|+|||. ......+.++|+|+   ||+.+++.++|.
T Consensus       144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~g~  219 (310)
T 3s95_A          144 NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM-INGRSYDEKVDVFS---FGIVLCEIIGRV  219 (310)
T ss_dssp             TSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHTC
T ss_pred             CCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHH-hcCCCCCcHHHHHH---HHHHHHHHhcCC
Confidence            56799999998852                          7788999998 44556678999999   888888888887


Q ss_pred             CCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           56 FSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+.............          .....++.......    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       220 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~  279 (310)
T 3s95_A          220 NADPDYLPRTMDFGL----------NVRGFLDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLET  279 (310)
T ss_dssp             CSSTTTSCBCTTSSB----------CHHHHHHHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcchhhhHHHHhh----------hhhccccccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            654332221110000          00011111111111    1246678889999999999999999999886

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.38  E-value=8.2e-15  Score=114.95  Aligned_cols=109  Identities=14%  Similarity=0.021  Sum_probs=75.2

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+....      
T Consensus       320 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~~l~el~t~g~~P~~~~------  389 (454)
T 1qcf_A          320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA-INFGSFTIKSDVWS---FGILLMEIVTYGRIPYPGM------  389 (454)
T ss_dssp             TCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC------
T ss_pred             CCcEEEeeCCCceEcCCCceeccCCCcccccccCHHH-hccCCCCcHHHHHh---HHHHHHHHHhCCCCCCCCC------
Confidence            56899999999985             4567999998 54566788999999   8888999998 66554221      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .... +......+..  +       ..+..+...+.++...|++.+|.+||+|.+|++.|+..
T Consensus       390 ~~~~-~~~~i~~~~~--~-------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          390 SNPE-VIRALERGYR--M-------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             CHHH-HHHHHHHTCC--C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CHHH-HHHHHHcCCC--C-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            1111 1111111110  0       01112234567888999999999999999999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.38  E-value=2e-13  Score=100.71  Aligned_cols=115  Identities=8%  Similarity=-0.036  Sum_probs=75.7

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.+++.++|+.+.....
T Consensus       144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~  219 (296)
T 3uzp_A          144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT-HLGIEQSRRDDLES---LGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTSSCC
T ss_pred             CCeEEEeeCCCcccccccccccccccccccccccccccCChhh-hcCCCCCcchhhHH---HHHHHHHHHhCCCCCCCcC
Confidence            46789999998762                   7889999998 44555678999999   8888999999988764322


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .................     .-.+.+...++    ..+.++...|++.+|.+||++.+|++.|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          220 AATKRQKYERISEKKMS-----TPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             CSSSSSHHHHHHHHHHH-----SCHHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             chhhhhhhhhhcccccC-----CchHHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence            21111111111110000     00000111122    346778899999999999999999999976

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.38  E-value=1.6e-14  Score=105.41  Aligned_cols=109  Identities=14%  Similarity=0.053  Sum_probs=72.8

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          ||..|+|||. ......+.++|+|+   +|+.+++.+||..+.....      ...
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~~------~~~  221 (271)
T 3dtc_A          152 NKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV-IRASMFSKGSDVWS---YGVLLWELLTGEVPFRGID------GLA  221 (271)
T ss_dssp             SCCEEECCCCC-------------CCGGGSCHHH-HHHCCCSHHHHHHH---HHHHHHHHHHCCCTTTTSC------HHH
T ss_pred             CcceEEccCCcccccccccccCCCCccceeCHHH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC------HHH
Confidence            45689999999874          7899999998 44556688999999   8888999999887653211      111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...... ....    ...+....    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       222 ~~~~~~-~~~~----~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          222 VAYGVA-MNKL----ALPIPSTC----PEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHH-TSCC----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHhhh-cCCC----CCCCCccc----CHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            111111 1111    11111111    2356778889999999999999999999975

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.38  E-value=1e-14  Score=115.63  Aligned_cols=109  Identities=17%  Similarity=0.012  Sum_probs=74.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. +.....+.++|+|+   ||+.+++.+| |..+....      
T Consensus       354 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvwS---lG~~l~el~t~g~~p~~~~------  423 (495)
T 1opk_A          354 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWA---FGVLLWEIATYGMSPYPGI------  423 (495)
T ss_dssp             GGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCSSTTC------
T ss_pred             CCcEEEeecccceeccCCceeecCCCcCCcceeCHhH-HhcCCCCcHHhHHh---HHHHHHHHHhCCCCCCCCC------
Confidence            56899999999985             3467999998 44555678999999   8888889998 55443211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .. ..+......+.         ....+..+...+.++...|++.+|.+||+|.+|++.|+..
T Consensus       424 ~~-~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          424 DL-SQVYELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CG-GGHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CH-HHHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            01 11111222211         1111112224567788999999999999999999999873

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.37  E-value=2.5e-14  Score=112.15  Aligned_cols=108  Identities=14%  Similarity=-0.049  Sum_probs=74.7

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         ++..|+|||. ......+.++|+|+   ||+.+.+.+| |..+.......   .   
T Consensus       325 ~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvws---lG~~l~el~t~g~~P~~~~~~~---~---  394 (450)
T 1k9a_A          325 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEA-LREKKFSTKSDVWS---FGILLWEIYSFGRVPYPRIPLK---D---  394 (450)
T ss_dssp             TSCEEECCCTTCEECC------CCCTTTSCHHH-HHSSCCCHHHHHHH---HHHHHHHHHTTTCCSSTTSCTT---T---
T ss_pred             CCCEEEeeCCCcccccccccCCCCCcceeCHHH-hcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCCHH---H---
Confidence            56899999999875         5678999998 44556788999999   8888889888 76654321111   1   


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       +......+....         .+..+...+.++...|++.+|.+||++.++++.|+.
T Consensus       395 -~~~~i~~~~~~~---------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          395 -VVPRVEKGYKMD---------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             -HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHHHHcCCCCC---------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence             111222221111         111222456778889999999999999999998875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.37  E-value=1.3e-14  Score=108.89  Aligned_cols=108  Identities=11%  Similarity=0.017  Sum_probs=73.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              |+.+|+|||. ......+.++|+|+   ||+.+++.+| |..+.......  
T Consensus       151 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~el~~~g~~p~~~~~~~--  224 (325)
T 3kex_A          151 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES-IHFGKYTHQSDVWS---YGVTVWELMTFGAEPYAGLRLA--  224 (325)
T ss_dssp             SSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTSCTT--
T ss_pred             CCeEEECCCCcccccCcccccccccCCCCcccccChHH-hccCCCChhhHhHH---hHHHHHHHHhCCCCCccccCHH--
Confidence            56799999999974              5678999998 44556788999999   8888999999 77665321111  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .    .......+..  ...+..       ....+..+...|++.+|.+||++.++++.|+.
T Consensus       225 -~----~~~~~~~~~~--~~~~~~-------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~  273 (325)
T 3kex_A          225 -E----VPDLLEKGER--LAQPQI-------CTIDVYMVMVKCWMIDENIRPTFKELANEFTR  273 (325)
T ss_dssp             -H----HHHHHHTTCB--CCCCTT-------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHH
T ss_pred             -H----HHHHHHcCCC--CCCCCc-------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             1    1112222211  111111       11235568889999999999999999999976

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.36  E-value=3.1e-15  Score=110.70  Aligned_cols=115  Identities=10%  Similarity=-0.053  Sum_probs=73.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC--
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE--   64 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~--   64 (169)
                      +.++||+|||+++.               ++..|+|||. ......+.++|+|+   ||+.+++.+||..+......+  
T Consensus       150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~~~~~~~~~~~  225 (295)
T 3ugc_A          150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES-LTESKFSVASDVWS---FGVVLYELFTYIEKSKSPPAEFM  225 (295)
T ss_dssp             TTEEEECCCCSCC-------------CTTCGGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHHTTCTTCSHHHHHH
T ss_pred             CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHH-hcCCCCChHHHHHH---HHHHHHHHHhcccccCCChHHHH
Confidence            46789999999974               3445999998 44556788999999   888899999987654321100  


Q ss_pred             -----CCc--chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 -----GGF--GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 -----~~~--~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                           ...  ............+.         ....+......+.++...|++.+|.+||++.++++.|+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          226 RMIGNDKQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhcCccccchhHHHHHHHHhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                 000  00001111111110         011112223457788899999999999999999999876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.36  E-value=1.5e-13  Score=101.50  Aligned_cols=113  Identities=5%  Similarity=-0.163  Sum_probs=73.9

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      .+||+|||+++.                   ||..|+|||. ......+.++|+|+   +|+.+++.++|+.+.......
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~~~~  224 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT-HLGREQSRRDDLEA---LGHVFMYFLRGSLPWQGLKAA  224 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTSSCCSC
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchh-hcCCCCChHHHHHH---HHHHHHHHHcCCCCcchhhcc
Confidence            499999998862                   7889999998 44555688999999   888899999998876432211


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .................     .+.+....    ...+.++...|++.+|.+||++.+|++.|+.
T Consensus       225 ~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~  280 (298)
T 1csn_A          225 TNKQKYERIGEKKQSTP-----LRELCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSK  280 (298)
T ss_dssp             CHHHHHHHHHHHHHHSC-----HHHHTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             ccHHHHHHHHhhccCcc-----HHHHHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence            11001111000000000     00011111    2356788889999999999999999999876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.36  E-value=2.2e-13  Score=100.38  Aligned_cols=115  Identities=8%  Similarity=-0.014  Sum_probs=75.5

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+++.                   ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.....
T Consensus       144 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT-HLGIEQSRRDDLES---LGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTSSCC
T ss_pred             CCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHH-hcCCCCCchhHHHH---HHHHHHHHhcCCCCCcccc
Confidence            45789999998862                   7889999998 44555678999999   8888999999988764322


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .................    ... +.+...+    ...+.++...|++.+|.+||++.+|++.|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~----~~~-~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          220 AATKRQKYERISEKKMS----TPI-EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             CSSSSSHHHHHHHHHHH----SCH-HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhccccc----chh-hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence            22111111111100000    000 0000111    2357788889999999999999999999876

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.36  E-value=2.3e-14  Score=116.31  Aligned_cols=108  Identities=12%  Similarity=-0.001  Sum_probs=74.6

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||+ ......+.++|+|+   ||+.+++.+| |..+....... 
T Consensus       472 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~-~~~~~~~~~sDvwS---lGv~l~ellt~G~~Pf~~~~~~-  546 (613)
T 2ozo_A          472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWS---YGVTMWEALSYGQKPYKKMKGP-  546 (613)
T ss_dssp             TTEEEECCCSTTTTCC--------------CCTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTCCSH-
T ss_pred             CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhh-hcCCCCCcHHHHHH---HHHHHHHHHHCCCCCCCCCCHH-
Confidence            46799999999975               3468999998 54566788999999   8888899998 76654321110 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        .    +......+....         .+..+...+.++...|++.+|.+||++.+|++.|+.
T Consensus       547 --~----~~~~i~~~~~~~---------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          547 --E----VMAFIEQGKRME---------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             --H----HHHHHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             --H----HHHHHHcCCCCC---------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence              1    111222222111         111223457788899999999999999999999976

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.36  E-value=9.3e-15  Score=109.91  Aligned_cols=108  Identities=17%  Similarity=-0.008  Sum_probs=73.1

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               +|..|+|||. ......+.++|+|+   ||+.+++.++ |..+.....   
T Consensus       187 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~~g~~p~~~~~---  259 (325)
T 3kul_A          187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA-IAFRTFSSASDVWS---FGVVMWEVLAYGERPYWNMT---  259 (325)
T ss_dssp             TCCEEECCCSSCEECC----CCEECC---CCGGGSCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCTTTTSC---
T ss_pred             CCCEEECCCCcccccccCccceeeccCCCCcccccCHhH-hcCCCCCcHHHHHH---HHHHHHHHHcCCCCCcccCC---
Confidence            56899999999874               3457999998 44556678999999   8888888888 666542211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         .. ........+..     ..    .+......+.++...|++.+|.+||++.+|++.|+.
T Consensus       260 ---~~-~~~~~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~  310 (325)
T 3kul_A          260 ---NR-DVISSVEEGYR-----LP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA  310 (325)
T ss_dssp             ---HH-HHHHHHHTTCC-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---HH-HHHHHHHcCCC-----CC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence               00 11111111110     00    111222356778899999999999999999999987

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.36  E-value=7.8e-14  Score=104.83  Aligned_cols=121  Identities=12%  Similarity=-0.047  Sum_probs=75.2

Q ss_pred             cccceeeeeEeecC--------------------CCCCCCCCCccccc------ccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE--------------------GRTGDDDEGYSYNI------LRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------gt~~y~ape~~~~~------~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +..+||+|||+++.                    ||..|+|||...+.      ...+.++|+|+   ||+.+++.+||.
T Consensus       156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diws---lG~il~ell~g~  232 (336)
T 3g2f_A          156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA---LGLIYWEIFMRC  232 (336)
T ss_dssp             TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHH---HHHHHHHHHTTB
T ss_pred             CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHH---HHHHHHHHHhcC
Confidence            46899999999852                    78899999983321      33456899999   888888999886


Q ss_pred             CCCCCCCCCCCcchhh-----------hhHHhhhCCCeeeecccccccc--ccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           56 FSNENKLGEGGFGPVY-----------KTWKLWCEGNVQELMDPVLKES--FILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~-----------~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      .+..............           ..........    ..+.+...  ........+.++...|++.+|.+||++.+
T Consensus       233 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (336)
T 3g2f_A          233 TDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQX  308 (336)
T ss_dssp             GGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHH
Confidence            5532211111100000           0000011111    11111111  11234556888999999999999999999


Q ss_pred             HHHHHhc
Q 041157          123 VVVMLAT  129 (169)
Q Consensus       123 V~~~L~~  129 (169)
                      |++.|+.
T Consensus       309 ~l~~L~~  315 (336)
T 3g2f_A          309 AEERMAE  315 (336)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999987

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.35  E-value=1.4e-13  Score=108.85  Aligned_cols=115  Identities=10%  Similarity=0.023  Sum_probs=75.7

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.++++++|..+.....
T Consensus       142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~-~~~~~~s~~sDvwS---lGvil~elltG~~Pf~~~~  217 (483)
T 3sv0_A          142 ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNT-HLGIEQSRRDDLES---LGYVLMYFLRGSLPWQGLK  217 (483)
T ss_dssp             TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTSSCC
T ss_pred             CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHH-hcCCCCChHHHHHH---HHHHHHHHHhCCCCCcccc
Confidence            46789999999863                   7889999998 44556788999999   8888999999988764322


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ............    .......+. .+...+    ...+..+...|++.+|.+||++.+|++.|+.
T Consensus       218 ~~~~~~~~~~i~----~~~~~~~~~-~l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          218 AGTKKQKYEKIS----EKKVATSIE-ALCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             CSSHHHHHHHHH----HHHHHSCHH-HHHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             chhHHHHHHHHh----hccccccHH-HHhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            211101111110    000000111 011111    2357788899999999999999999988864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=3.7e-14  Score=108.71  Aligned_cols=110  Identities=16%  Similarity=0.078  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                ++..|+|||. ......+.++|+|+   ||+.+++.+|++.+....... 
T Consensus       228 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~DvwS---lG~il~ellt~~~~p~~~~~~-  302 (373)
T 3c1x_A          228 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWS---FGVLLWELMTRGAPPYPDVNT-  302 (373)
T ss_dssp             TCCEEECCC---------------------CCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSCTTSCS-
T ss_pred             CCCEEEeeccccccccccccccccccCCCCCcccccChHH-hcCCCCCcHHHHHH---HHHHHHHHHhCcCCCCCCCCH-
Confidence            56899999999973                4567999998 44556778999999   888899999965543221111 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                       .....    ....+..  ...+       ......+.++...|++.+|.+||++.++++.|+..
T Consensus       303 -~~~~~----~~~~~~~--~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          303 -FDITV----YLLQGRR--LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             -SCHHH----HHHTTCC--CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHHHH----HHHcCCC--CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             11111    1111111  1111       11123467788899999999999999999999873

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.35  E-value=3e-14  Score=107.80  Aligned_cols=107  Identities=12%  Similarity=0.098  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc----------cccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN----------ILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~----------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.              ||.+|+|||+..+          ....+.++|+|+   ||+.+++.++|..+
T Consensus       143 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diws---lG~il~ell~g~~p  219 (343)
T 3dbq_A          143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS---LGCILYYMTYGKTP  219 (343)
T ss_dssp             TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHH---HHHHHHHHHHSSCT
T ss_pred             CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHH---HHHHHHHHHhCCCc
Confidence            34689999999864              7999999998322          145678899999   88889999999877


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......     ......         .++++......+......+..+...|++.+|.+||++.++++
T Consensus       220 f~~~~~-----~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          220 FQQIIN-----QISKLH---------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             TTTCCS-----HHHHHH---------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhhh-----HHHHHH---------HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            532111     111111         112221111111111134667888999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.35  E-value=2.3e-14  Score=107.10  Aligned_cols=101  Identities=13%  Similarity=0.092  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ||.+|+|||+..  ...+.++|+|+   ||+.+++.++|......        -.
T Consensus       193 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Diws---lG~il~el~~g~~~~~~--------~~  259 (311)
T 3p1a_A          193 RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ--GSYGTAADVFS---LGLTILEVACNMELPHG--------GE  259 (311)
T ss_dssp             GGCEEECCCTTCEECC------CCCCCGGGCCGGGGG--TCCSTHHHHHH---HHHHHHHHHHTCCCCSS--------HH
T ss_pred             CCCEEEccceeeeecccCCCCcccCCCccccCHhHhc--CCCCchhhHHH---HHHHHHHHHhCCCCCCC--------cc
Confidence            56899999998764           789999999833  25678999999   88889999998644311        01


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        .+..+..+.    ..+.+...    ....+.++...|++.+|.+||++.++++
T Consensus       260 --~~~~~~~~~----~~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          260 --GWQQLRQGY----LPPEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             --HHHHHTTTC----CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --HHHHHhccC----CCcccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence              111222211    11111111    1235677888999999999999999986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.34  E-value=7.7e-15  Score=109.81  Aligned_cols=103  Identities=9%  Similarity=-0.083  Sum_probs=69.7

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      ++.++||+|||+|+.              ||+.|||||. +.....+.++|+||   +|+.+.+.+||..+...   .  
T Consensus       167 ~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEv-l~~~~y~~~~DiWS---lGvilyeml~G~~PF~~---~--  237 (311)
T 4aw0_A          167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL-LTEKSACKSSDLWA---LGCIIYQLVAGLPPFRA---G--  237 (311)
T ss_dssp             TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHH-HHHSCBCHHHHHHH---HHHHHHHHHHSSCSSCC---S--
T ss_pred             CCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHH-HcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCC---C--
Confidence            357899999999973              8999999998 44455678999999   88888899999887532   1  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                       ....... ....+..      .+.....    ..+..+...|++.+|.+||+..|+.
T Consensus       238 -~~~~~~~-~i~~~~~------~~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          238 -NEGLIFA-KIIKLEY------DFPEKFF----PKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             -SHHHHHH-HHHHTCC------CCCTTCC----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             -CHHHHHH-HHHcCCC------CCCcccC----HHHHHHHHHHccCCHhHCcChHHHc
Confidence             1111111 1111111      1111122    2355678899999999999998863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.34  E-value=3.4e-13  Score=101.47  Aligned_cols=119  Identities=14%  Similarity=0.059  Sum_probs=74.6

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccc-----cCCccccCCCCCCcCHHHHHHHHhCC----
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNIL-----RGNKKVESQELPLFPLDLIHEATRNF----   56 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~-----~~~~~~dv~s~~~~~~~ll~~~t~~~----   56 (169)
                      +.++||+|||+++.                ||..|+|||...+..     ..+.++|+|+   ||+.+++.+||..    
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~s---lG~il~el~tg~~~~~~  259 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA---MGLVFWEIARRCSIGGI  259 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHH---HHHHHHHHHTTBCBTTB
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHH---HHHHHHHHHhccCcCCc
Confidence            56899999998753                788999999833221     1226899999   8888889999832    


Q ss_pred             ------CCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           57 ------SNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        57 ------~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                            +........ ..... .......    ..+.+.+...+ ..++...+.++...|++.+|.+||++.+|++.|+.
T Consensus       260 ~~~~~~p~~~~~~~~-~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~  333 (342)
T 1b6c_B          260 HEDYQLPYYDLVPSD-PSVEE-MRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  333 (342)
T ss_dssp             CCCCCCTTTTTSCSS-CCHHH-HHHHHTT----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccccCccccCcCc-ccHHH-HHHHHHH----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence                  221111000 00111 1111111    11222222211 23566778899999999999999999999999976

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.34  E-value=8e-14  Score=105.51  Aligned_cols=118  Identities=6%  Similarity=-0.044  Sum_probs=75.4

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      .+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.+++.+||..+.......
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~g~~pf~~~~~~  266 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDA-HKGVALSRRSDVEI---LGYCMLRWLCGKLPWEQNLKD  266 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHH-HHTCCCCHHHHHHH---HHHHHHHHHHSSCTTGGGTTC
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHH-hcCCCCCchhhHHH---HHHHHHHHHhCCCCccccccc
Confidence            799999999852                   7899999998 44556788999999   888899999998875321111


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCC
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT  131 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~  131 (169)
                      .  ............ .....+......   ......+.++...|++.+|.+||++.+|++.|+...
T Consensus       267 ~--~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          267 P--VAVQTAKTNLLD-ELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             H--HHHHHHHHHHHH-TTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             c--HHHHHHHHhhcc-cccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            0  011111111100 000000000000   011235677888999999999999999999998733

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.34  E-value=1.5e-14  Score=111.00  Aligned_cols=108  Identities=15%  Similarity=0.020  Sum_probs=73.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              +|..|+|||. ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Diws---lG~il~ellt~g~~p~~~~-----  297 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWS---FGVLLWEIFTLGGSPYPGV-----  297 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHH-HHSCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHH-hcCCCCCchhHHHH---HHHHHHHHHhCCCCCCCCC-----
Confidence            56899999999974              4567999998 44556678999999   8888888888 66554211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .. .........+....     .....    ...+.++...|++.+|.+||++.+|++.|+.
T Consensus       298 -~~-~~~~~~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  349 (382)
T 3tt0_A          298 -PV-EELFKLLKEGHRMD-----KPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  349 (382)
T ss_dssp             -CH-HHHHHHHHTTCCCC-----CCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CH-HHHHHHHHcCCCCC-----CCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             11 11122222221111     11111    2346778889999999999999999999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.34  E-value=1.4e-14  Score=109.91  Aligned_cols=109  Identities=14%  Similarity=-0.020  Sum_probs=73.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ||..|+|||. ......+.++|+|+   ||+.+++.+| |..+......   
T Consensus       229 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~~~---  301 (359)
T 3vhe_A          229 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IFDRVYTIQSDVWS---FGVLLWEIFSLGASPYPGVKI---  301 (359)
T ss_dssp             GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTSCCSSTTCCC---
T ss_pred             CCcEEEEeccceeeecccccchhccccCCCceeEChhh-hcCCCCCchhhhhh---HHHHHHHHHhcCCCCCCccch---
Confidence            56799999999874              5678999998 44556678999999   8888889888 7665432111   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..........+....     .....+    ..+.++...|++.+|.+||++.+|++.|+.
T Consensus       302 ---~~~~~~~~~~~~~~~-----~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          302 ---DEEFCRRLKEGTRMR-----APDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             ---SHHHHHHHHHTCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---hHHHHHHHHcCCCCC-----CCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence               111111111111100     111112    246678889999999999999999999975

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.33  E-value=9.3e-14  Score=102.25  Aligned_cols=110  Identities=21%  Similarity=0.141  Sum_probs=73.7

Q ss_pred             cceeeeeEeecC---------CCCCCCCCCccc-ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 041157            4 KQKVLQFLRSGE---------GRTGDDDEGYSY-NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKT   73 (169)
Q Consensus         4 ~~Ki~dFgls~~---------gt~~y~ape~~~-~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~   73 (169)
                      .+||+|||+++.         ||..|+|||... .....+.++|+|+   +|+.+++.++|..+......    .-....
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~~~----~~~~~~  239 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS---FAMILYTILTGEGPFDEYSY----GKIKFI  239 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHH---HHHHHHHHHHSSCTTTTCCC----CHHHHH
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHH---HHHHHHHHHcCCCCCccccc----cHHHHH
Confidence            489999999875         889999999832 2334567899999   88889999999877532111    111111


Q ss_pred             HHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           74 WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        74 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ......+     ..+.+....+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       240 ~~~~~~~-----~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          240 NMIREEG-----LRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHSC-----CCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHhccC-----CCCCCCcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            1111111     1111111122    356778889999999999999999999975

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.33  E-value=9.2e-15  Score=112.08  Aligned_cols=108  Identities=16%  Similarity=0.032  Sum_probs=72.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+.+..| |..+.....    
T Consensus       249 ~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dvws---lG~il~el~t~g~~p~~~~~----  320 (377)
T 3cbl_A          249 KNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA-LNYGRYSSESDVWS---FGILLWETFSLGASPYPNLS----  320 (377)
T ss_dssp             TCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTSCCSSTTSC----
T ss_pred             CCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCCC----
Confidence            56799999999874              2456999998 44555678999999   8888888888 555432210    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ..........+....         .+..+...+.++...|++.+|.+||++.++++.|+.
T Consensus       321 ---~~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          321 ---NQQTREFVEKGGRLP---------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             ---HHHHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---HHHHHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence               111122222221110         111122356678889999999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.33  E-value=4.1e-14  Score=109.01  Aligned_cols=107  Identities=12%  Similarity=0.097  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc----------cccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN----------ILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~----------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.              ||..|+|||+..+          ....+.++|+|+   ||+.+++.++|..+
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwS---lGvil~ell~G~~P  266 (390)
T 2zmd_A          190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS---LGCILYYMTYGKTP  266 (390)
T ss_dssp             SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHH---HHHHHHHHHHSSCT
T ss_pred             CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHH---HHHHHHHHHHCCCc
Confidence            45789999999873              7899999998332          124678899999   88889999999877


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....     .......         .++++......+......+..+...|++.+|.+||++.++++
T Consensus       267 f~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          267 FQQII-----NQISKLH---------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             TTTCC-----CHHHHHH---------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhh-----HHHHHHH---------HHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            53211     1111111         122221111111111134667888999999999999999975

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.33  E-value=3.7e-13  Score=99.32  Aligned_cols=114  Identities=11%  Similarity=0.077  Sum_probs=72.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.              ||..|+|||...  .....+.++|+|+   +|+.+++.++|..+......  
T Consensus       156 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~~~--  230 (289)
T 3og7_A          156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA---FGIVLYELMTGQLPYSNINN--  230 (289)
T ss_dssp             TTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHH---HHHHHHHHHHSSCTTSSCCC--
T ss_pred             CCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHH---HHHHHHHHHHCCCCccccch--
Confidence            46789999999863              789999999832  1334567899999   88889999999877533211  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          ..........+.....+. .+..    .....+.++...|++.+|.+||++.++++.|+.
T Consensus       231 ----~~~~~~~~~~~~~~~~~~-~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  285 (289)
T 3og7_A          231 ----RDQIIEMVGRGSLSPDLS-KVRS----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEE  285 (289)
T ss_dssp             ----HHHHHHHHHHTSCCCCTT-SSCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----HHHHHHHhcccccCcchh-hccc----cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence                111122222222111111 1111    122457788889999999999999999999987

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.33  E-value=2.6e-14  Score=107.57  Aligned_cols=108  Identities=8%  Similarity=-0.050  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              +|..|+|||. ......+.++|+|+   +|+.+++.+| |..+.......  
T Consensus       153 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~~g~~p~~~~~~~--  226 (327)
T 3lzb_A          153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES-ILHRIYTHQSDVWS---YGVTVWELMTFGSKPYDGIPAS--  226 (327)
T ss_dssp             TTEEEECCTTC----------------CCCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTCCGG--
T ss_pred             CCCEEEccCcceeEccCccccccccCCCccccccCHHH-HcCCCCChHHHHHH---HHHHHHHHHHCCCCCCCCCCHH--
Confidence            46789999999975              4567999998 44556678999999   8888999998 76654321111  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .    .......+....     .    +......+..+...|++.+|.+||++.++++.|+.
T Consensus       227 -~----~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  275 (327)
T 3lzb_A          227 -E----ISSILEKGERLP-----Q----PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             -G----HHHHHHTTCCCC-----C----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -H----HHHHHHcCCCCC-----C----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence             1    111111111000     0    11112246678889999999999999999999987

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.32  E-value=9.1e-14  Score=106.19  Aligned_cols=113  Identities=4%  Similarity=-0.209  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         +|..|+|||...+ ....+.++|+|+   ||+.+++.+||+.+.........   . 
T Consensus       230 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwS---lG~il~elltg~~Pf~~~~~~~~---~-  302 (371)
T 3q60_A          230 DGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQ---LGLSIYRVWCLFLPFGLVTPGIK---G-  302 (371)
T ss_dssp             TSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHH---HHHHHHHHHHSSCSTTBCCTTCT---T-
T ss_pred             CCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHH---HHHHHHHHHhCCCCCCCcCcccc---c-
Confidence            56899999999875         6799999998332 256689999999   88889999999887643321110   0 


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          .+............+.-.........+..+...|++.+|.+||++.++++
T Consensus       303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          303 ----SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             ----CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ----chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                00000000000111100000111235667888999999999999999863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.32  E-value=9.8e-14  Score=104.02  Aligned_cols=107  Identities=11%  Similarity=-0.036  Sum_probs=61.1

Q ss_pred             cccceeeeeEeecC------------------------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE------------------------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +..+||+|||+++.                        ||..|+|||...  .....+.++|+|+   ||+.+++.+||.
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~s---lG~il~el~~g~  250 (337)
T 3ll6_A          174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA---LGCILYLLCFRQ  250 (337)
T ss_dssp             TSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHH---HHHHHHHHHHSS
T ss_pred             CCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHH---HHHHHHHHHhCC
Confidence            46899999999863                        678899999831  3445678999999   888889999998


Q ss_pred             CCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           56 FSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .+......                   .+++...............+..+...|++.+|.+||++.++++.|+..
T Consensus       251 ~p~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          251 HPFEDGAK-------------------LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             CCC-------------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcchhH-------------------HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            77532100                   001111110000000011255688899999999999999999999863

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.32  E-value=2e-14  Score=109.88  Aligned_cols=107  Identities=13%  Similarity=0.017  Sum_probs=72.1

Q ss_pred             ccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            3 AKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         3 ~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      ..+||+|||+++.              ||..|+|||. +.....+.++|+|+   ||+.+++.+| |..+....      
T Consensus       221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Dvws---lG~il~ellt~g~~pf~~~------  290 (367)
T 3l9p_A          221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA-FMEGIFTSKTDTWS---FGVLLWEIFSLGYMPYPSK------  290 (367)
T ss_dssp             CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC------
T ss_pred             ceEEECCCccccccccccccccCCCcCCcccEECHHH-hcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCC------
Confidence            4589999999973              5778999998 44556778999999   8888888888 65553221      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+....     .    +......+.++...|++.+|.+||++.+|++.|+.
T Consensus       291 ~~~~-~~~~i~~~~~~~-----~----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          291 SNQE-VLEFVTSGGRMD-----P----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CHHH-HHHHHHTTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHHcCCCCC-----C----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            1111 111111111100     0    11122346778899999999999999999999876

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.31  E-value=1.1e-12  Score=97.81  Aligned_cols=121  Identities=16%  Similarity=0.087  Sum_probs=71.9

Q ss_pred             cccceeeeeEeecC-----------------CCCCCCCCCcccc--------cccCCccccCCCCCCcCHHHHHHHHhCC
Q 041157            2 NAKQKVLQFLRSGE-----------------GRTGDDDEGYSYN--------ILRGNKKVESQELPLFPLDLIHEATRNF   56 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------------gt~~y~ape~~~~--------~~~~~~~~dv~s~~~~~~~ll~~~t~~~   56 (169)
                      +..+||+|||+++.                 |+..|+|||....        ....+.++|+|+   ||+.+++.++|..
T Consensus       165 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~  241 (319)
T 2y4i_B          165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFA---LGTIWYELHAREW  241 (319)
T ss_dssp             --CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHH---HHHHHHHHHHSSC
T ss_pred             CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHH---HHHHHHHHHhCCC
Confidence            35789999998653                 6788999998322        123477899999   8888889999887


Q ss_pred             CCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCC
Q 041157           57 SNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQ  136 (169)
Q Consensus        57 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~~~~~  136 (169)
                      +.....      .....+ ....+.........    .+    ..+..+...|++.+|.+||++.++++.|+........
T Consensus       242 p~~~~~------~~~~~~-~~~~~~~~~~~~~~----~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~  306 (319)
T 2y4i_B          242 PFKTQP------AEAIIW-QMGTGMKPNLSQIG----MG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR  306 (319)
T ss_dssp             SSSSCC------HHHHHH-HHHTTCCCCCCCSS----CC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred             CCCCCC------HHHHHH-HhccCCCCCCCcCC----CC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            653211      111111 11112111111111    11    2356788899999999999999999999984433333


Q ss_pred             CCCC
Q 041157          137 PTQP  140 (169)
Q Consensus       137 ~~~p  140 (169)
                      ...|
T Consensus       307 ~~~~  310 (319)
T 2y4i_B          307 LSHP  310 (319)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            3333

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.30  E-value=4.6e-14  Score=112.88  Aligned_cols=110  Identities=15%  Similarity=-0.022  Sum_probs=74.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   ||+.+++++| |..+....      
T Consensus       399 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvwS---lGv~l~el~t~g~~P~~~~------  468 (535)
T 2h8h_A          399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELTTKGRVPYPGM------  468 (535)
T ss_dssp             GGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTTCCSSTTC------
T ss_pred             CCcEEEcccccceecCCCceecccCCcCcccccCHHH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC------
Confidence            56899999999975             4567999998 44556788999999   8888889888 66543211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCC
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT  131 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~  131 (169)
                      ... .+......+....         .+..+...+.++...|++.+|++||++.+|++.|+...
T Consensus       469 ~~~-~~~~~i~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          469 VNR-EVLDQVERGYRMP---------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             CHH-HHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CHH-HHHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            011 1111222221110         11122235677888999999999999999999999843

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.30  E-value=2.7e-14  Score=116.34  Aligned_cols=108  Identities=14%  Similarity=0.036  Sum_probs=74.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               +|..|+|||+ ......+.++|+|+   ||+.+++++| |..+......  
T Consensus       505 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~-~~~~~~~~~sDvwS---lGv~l~ellt~G~~Pf~~~~~--  578 (635)
T 4fl3_A          505 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWS---FGVLMWEAFSYGQKPYRGMKG--  578 (635)
T ss_dssp             TTEEEECCTTHHHHTTC-------------CGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCSSTTCCH--
T ss_pred             CCCEEEEEcCCccccccCccccccccCCCCceeeeChhh-hcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCCH--
Confidence            46789999999873               4567999998 54556788999999   8888999998 7766432110  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                           ..+......+....         .+..+...+.++...|++.+|.+||++.+|++.|+.
T Consensus       579 -----~~~~~~i~~~~~~~---------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          579 -----SEVTAMLEKGERMG---------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             -----HHHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -----HHHHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                 11222222222111         111222456778889999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.30  E-value=4.4e-14  Score=105.07  Aligned_cols=109  Identities=15%  Similarity=0.045  Sum_probs=72.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+.......  
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~~~~--  254 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES-IFNCVYTFESDVWS---YGIFLWELFSLGSSPYPGMPVD--  254 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCSSTTCCSS--
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHH-hcCCCCChHHHHHH---HHHHHHHHHhCCCCCCCcccch--
Confidence            56789999999875              3457999998 44556788999999   8888889988 66554221110  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+.     ........    ...+..+...|++.+|.+||++.++++.|+.
T Consensus       255 ----~~~~~~~~~~~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          255 ----SKFYKMIKEGF-----RMLSPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             ----HHHHHHHHHTC-----CCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----hHHHHHhccCC-----CCCCcccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence                11111111111     00001111    2346778889999999999999999999976

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.30  E-value=3.8e-13  Score=100.28  Aligned_cols=112  Identities=7%  Similarity=-0.022  Sum_probs=72.1

Q ss_pred             cccceeeeeEeecC---------------------CCCCCCCCCccccc--ccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------------GRTGDDDEGYSYNI--LRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------------gt~~y~ape~~~~~--~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.                     ||..|+|||.....  ...+.++|+|+   ||+.+++.++|..+.
T Consensus       170 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~  246 (317)
T 2buj_A          170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS---LGCVLYAMMFGEGPY  246 (317)
T ss_dssp             TSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHH---HHHHHHHHHHSSCTT
T ss_pred             CCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHH---HHHHHHHHHhCCCCh
Confidence            56789999997653                     58899999983221  12467899999   888888999988764


Q ss_pred             CCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           59 ENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        59 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      ........ .+    ...... .. ..  + .....+    ..+.++...|++.+|.+||++.++++.|+..
T Consensus       247 ~~~~~~~~-~~----~~~~~~-~~-~~--~-~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          247 DMVFQKGD-SV----ALAVQN-QL-SI--P-QSPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             HHHHHTTS-CH----HHHHHC-C---C--C-CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hhhhcccc-hh----hHHhhc-cC-CC--C-ccccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            22110000 00    001111 00 00  0 001112    3467788899999999999999999999983

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.29  E-value=8.8e-14  Score=104.07  Aligned_cols=108  Identities=13%  Similarity=0.018  Sum_probs=70.8

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+.....    
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~~g~~p~~~~~----  244 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES-LADNLYTVHSDVWA---FGVTMWEIMTRGQTPYAGIE----  244 (323)
T ss_dssp             TSCEEECCCCC-----------------CCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTCC----
T ss_pred             CCCEEEeeccccccccccccccccccccCcccccCchh-hcCCCCCCccchhh---HHHHHHHHHhCCCCCccccC----
Confidence            56899999999874              4567999998 44556778999999   8888889899 555432211    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... .......+....     .    +......+..+...|++.+|.+||++.++++.|+.
T Consensus       245 --~~~-~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          245 --NAE-IYNYLIGGNRLK-----Q----PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             --GGG-HHHHHHTTCCCC-----C----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             --hHH-HHHHHhcCCCCC-----C----CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              011 111111111100     0    11122356788899999999999999999999987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.29  E-value=1.4e-13  Score=101.01  Aligned_cols=108  Identities=13%  Similarity=-0.047  Sum_probs=71.3

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.         ++..|+|||. ......+.++|+|+   +|+.+++..| |..+.....      ...
T Consensus       153 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~t~g~~p~~~~~------~~~  222 (278)
T 1byg_A          153 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEA-LREKKFSTKSDVWS---FGILLWEIYSFGRVPYPRIP------LKD  222 (278)
T ss_dssp             TSCEEECCCCC------------CCTTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSCTTSC------GGG
T ss_pred             CCcEEEeeccccccccccccCCCccccccCHHH-hCCCCCCchhcHHH---HHHHHHHHHhCCCCCCCCCC------HHH
Confidence            56789999999875         6788999998 44556678999999   8888888888 665543211      111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .......+.     ........    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       223 -~~~~~~~~~-----~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          223 -VVPRVEKGY-----KMDAPDGC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             -HHHHHTTTC-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHHHhcCC-----CCCCcccC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence             111111111     01111112    2346678889999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.29  E-value=3.4e-14  Score=106.76  Aligned_cols=109  Identities=15%  Similarity=0.044  Sum_probs=71.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+.......  
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~~~~~--  273 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES-IFDCVYTVQSDVWS---YGILLWEIFSLGLNPYPGILVN--  273 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTSCCSSTTCCSS--
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHH-hccCCCChHHHHHH---HHHHHHHHHcCCCCCCcccchh--
Confidence            46789999999874              4567999998 44556778999999   8888888888 55443221111  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+.  ....+   ...    ...+..+...|++.+|.+||++.+|++.|+.
T Consensus       274 ----~~~~~~~~~~~--~~~~~---~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          274 ----SKFYKLVKDGY--QMAQP---AFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             ----HHHHHHHHHTC--CCCCC---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----HHHHHHHhcCC--CCCCC---CCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence                11111111111  00011   111    2346778889999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.29  E-value=1.3e-13  Score=102.02  Aligned_cols=109  Identities=17%  Similarity=0.082  Sum_probs=73.4

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                +|..|+|||. ......+.++|+|+   +|+.+++.++|+.+........
T Consensus       164 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~~~~~~~~~~~~  239 (298)
T 3f66_A          164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWS---FGVLLWELMTRGAPPYPDVNTF  239 (298)
T ss_dssp             TCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTSCTT
T ss_pred             CCCEEECcccccccccccchhccccccCCCCCccccChHH-hcCCCCChHHHHHH---HHHHHHHHHhCCCCCCccCCHH
Confidence            56899999999874                4567999998 44556678999999   8888999999766543221111


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ....    ....+..  ...+   ...+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       240 --~~~~----~~~~~~~--~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          240 --DITV----YLLQGRR--LLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             --THHH----HHHTTCC--CCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --HHHH----HHhcCCC--CCCC---ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              1111    1111110  1111   1112    346778889999999999999999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=5.1e-14  Score=106.27  Aligned_cols=112  Identities=12%  Similarity=-0.066  Sum_probs=74.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ||..|+|||. ......+.++|+|+   ||+.+++.+| |..+.......  
T Consensus       208 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~~~~~--  281 (344)
T 1rjb_A          208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES-LFEGIYTIKSDVWS---YGILLWEIFSLGVNPYPGIPVD--  281 (344)
T ss_dssp             TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTSCCSSTTCCCS--
T ss_pred             CCcEEeCCCccCcccccCccceeccCccCccCccCHHH-hccCCCChhHhHHH---HHHHHHHHHcCCCCCcccCCcH--
Confidence            56799999999874              4567999998 44556778999999   8888999988 66554321110  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCC
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTI  132 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~  132 (169)
                          .........+..     ...    +......+..+...|++.+|.+||++.++++.|+....
T Consensus       282 ----~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          282 ----ANFYKLIQNGFK-----MDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             ----HHHHHHHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ----HHHHHHHhcCCC-----CCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence                111111221110     011    11112356778889999999999999999999987433

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=8.7e-14  Score=104.88  Aligned_cols=108  Identities=15%  Similarity=0.037  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+....    
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~pf~~~----  254 (333)
T 1mqb_A          183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA-ISYRKFTSASDVWS---FGIVMWEVMTYGERPYWEL----  254 (333)
T ss_dssp             TCCEEECCCCC-----------------CCCGGGSCHHH-HHSCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTC----
T ss_pred             CCcEEECCCCcchhhccccccccccCCCCccccccCchh-cccCCCCchhhhHH---HHHHHHHHHcCCCCCcccC----
Confidence            56899999999875               3457999998 44556678999999   8888888888 66654211    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... ........+...     ..    +......+.++...|++.+|.+||++.++++.|+.
T Consensus       255 --~~~-~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          255 --SNH-EVMKAINDGFRL-----PT----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             --CHH-HHHHHHHTTCCC-----CC----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             --CHH-HHHHHHHCCCcC-----CC----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              011 111112111100     00    11122346778899999999999999999999876

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.29  E-value=9e-15  Score=109.53  Aligned_cols=123  Identities=12%  Similarity=-0.021  Sum_probs=74.2

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|+|||. ......+.++|+|+   +|+.+++.+||..+........ 
T Consensus       170 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~ll~g~~p~~~~~~~~-  244 (318)
T 3lxp_A          170 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKEYKFYYASDVWS---FGVTLYELLTHCDSSQSPPTKF-  244 (318)
T ss_dssp             TCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTTCGGGSHHHHH-
T ss_pred             CCCEEECCccccccccccccccccccCCCCCceeeChHH-hcCCCCCcHHHHHH---HHHHHHHHHhCCCcccccchhh-
Confidence            46789999998864               4566999998 44445568899999   8888999999876543210000 


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+.........+.+.++.......+......+.++...|++.+|.+||++.++++.|+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  307 (318)
T 3lxp_A          245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT  307 (318)
T ss_dssp             HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            000000000000000111111111111122223457788889999999999999999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=1.2e-13  Score=101.99  Aligned_cols=109  Identities=18%  Similarity=0.108  Sum_probs=73.8

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                ++..|+|||. ......+.++|+|+   +|+.+++.+||+.+....... 
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~~~~~~~~~-  234 (298)
T 3pls_A          160 SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES-LQTYRFTTKSDVWS---FGVLLWELLTRGAPPYRHIDP-  234 (298)
T ss_dssp             TCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHTSCCTTTTSCG-
T ss_pred             CCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhh-hccCCCChhhchhh---HHHHHHHHhhCCCCCCccCCH-
Confidence            56899999999863                5678999998 44556678999999   888899999977664321111 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ..+.    .....+...     ......    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       235 -~~~~----~~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~  284 (298)
T 3pls_A          235 -FDLT----HFLAQGRRL-----PQPEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ  284 (298)
T ss_dssp             -GGHH----HHHHTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHH----HHhhcCCCC-----CCCccc----hHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             1111    111111100     001111    1346778889999999999999999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.28  E-value=1.1e-13  Score=101.77  Aligned_cols=108  Identities=14%  Similarity=-0.027  Sum_probs=66.6

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+......   .
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~ell~~g~~pf~~~~~---~  224 (281)
T 1mp8_A          152 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-INFRRFTSASDVWM---FGVCMWEILMHGVKPFQGVKN---N  224 (281)
T ss_dssp             TTEEEECC-------------------CCGGGCCHHH-HHHCCCSHHHHHHH---HHHHHHHHHTTSCCTTTTCCG---G
T ss_pred             CCCEEECccccccccCcccccccccCCCcccccChhh-cccCCCCCccCchH---HHHHHHHHHhcCCCCCCcCCH---H
Confidence            45789999999875             4567999998 44556678999999   8888888886 5544322111   0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+..    ....+...     .+....    ...+..+...|++.+|.+||++.++++.|+.
T Consensus       225 ~~~~----~i~~~~~~-----~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          225 DVIG----RIENGERL-----PMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             GHHH----HHHTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHH----HHHcCCCC-----CCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1111    11111110     011112    2346678889999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.28  E-value=6e-14  Score=104.39  Aligned_cols=108  Identities=14%  Similarity=0.044  Sum_probs=72.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+......   
T Consensus       186 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~~~~---  258 (314)
T 2ivs_A          186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIES-LFDHIYTTQSDVWS---FGVLLWEIVTLGGNPYPGIPP---  258 (314)
T ss_dssp             TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCSSTTCCG---
T ss_pred             CCCEEEccccccccccccccceeccCCCCcccccChhh-hcCCCcCchhhHHH---HHHHHHHHHhCCCCCCCCCCH---
Confidence            56789999998863              4567999998 43455678999999   8888889998 6655432111   


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          .........+...     ......    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       259 ----~~~~~~~~~~~~~-----~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          259 ----ERLFNLLKTGHRM-----ERPDNC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             ----GGHHHHHHTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----HHHHHHhhcCCcC-----CCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                1111122222111     111112    2356778889999999999999999999876

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.27  E-value=1.4e-12  Score=98.89  Aligned_cols=115  Identities=7%  Similarity=-0.069  Sum_probs=75.7

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      .+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.+++.+||..+.......
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL-HKGCGPSRRSDLQS---LGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSCCTTGGGTTC
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHH-HccCCCCchhhHHH---HHHHHHHHHhCCCCcccCCcC
Confidence            789999999952                   7889999998 44556788999999   888899999998775432111


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccc-cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKE-SFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ..........+. .....+.+..... ..+    ..+.++...|++.+|.+||++.+|++.|+.
T Consensus       275 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  333 (352)
T 2jii_A          275 --TEDIMKQKQKFV-DKPGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEA  333 (352)
T ss_dssp             --HHHHHHHHHHHH-HSCCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             --HHHHHHHHHhcc-CChhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence              011111111111 1112222222111 112    346678889999999999999999999876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.27  E-value=1e-13  Score=101.87  Aligned_cols=108  Identities=14%  Similarity=0.004  Sum_probs=72.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   ||+.+++.+| |+.+.......   
T Consensus       149 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~llt~g~~p~~~~~~~---  221 (281)
T 3cc6_A          149 PECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES-INFRRFTTASDVWM---FAVCMWEILSFGKQPFFWLENK---  221 (281)
T ss_dssp             TTEEEECCCCGGGCC---------CCCCCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCTTTTSCGG---
T ss_pred             CCcEEeCccCCCcccccccccccccCCCCcceeCchh-hccCCCCchhccHH---HHHHHHHHHhCCCCCcccCChH---
Confidence            45789999998874             4567999998 44556678999999   8888889898 77664321111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...    .....+....     .....+    ..+..+...|++.+|.+||++.++++.|+.
T Consensus       222 ~~~----~~~~~~~~~~-----~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          222 DVI----GVLEKGDRLP-----KPDLCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             GHH----HHHHHTCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH----HHHhcCCCCC-----CCCCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence            111    1111111000     011111    346678889999999999999999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.26  E-value=9.9e-15  Score=109.57  Aligned_cols=118  Identities=14%  Similarity=-0.024  Sum_probs=74.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ||..|+|||. +.....+.++|+|+   +|+.+++.++|..+......   
T Consensus       163 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~ll~g~~p~~~~~~---  235 (327)
T 3lxl_A          163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES-LSDNIFSRQSDVWS---FGVVLYELFTYCDKSCSPSA---  235 (327)
T ss_dssp             TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTTCGGGSHHH---
T ss_pred             CCCEEEcccccceecccCCccceeeccCCccccccCHHH-hccCCCChHHhHHH---HHHHHHHHHhCCCCCccccc---
Confidence            46789999999873               5566999998 44445578999999   88888899998765422100   


Q ss_pred             cchhhhhHHhhhC-CC------eeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCC
Q 041157           67 FGPVYKTWKLWCE-GN------VQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT  131 (169)
Q Consensus        67 ~~lv~~~~~~~~~-~~------~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~  131 (169)
                          . ....... ..      +.+.+........+......+.++...|++.+|.+||++.++++.|+...
T Consensus       236 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          236 ----E-FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             ----H-HHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             ----h-hhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                0 0000000 00      00111111111112222345778888999999999999999999998743

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.26  E-value=8.1e-14  Score=102.38  Aligned_cols=108  Identities=17%  Similarity=0.048  Sum_probs=72.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             +|..|+|||. ......+.++|+|+   +|+.+++.+| |+.+.....     
T Consensus       156 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~~l~~l~t~g~~p~~~~~-----  226 (283)
T 3gen_A          156 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSKSDIWA---FGVLMWEIYSLGKMPYERFT-----  226 (283)
T ss_dssp             TSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHH-HHHCCCSHHHHHHH---HHHHHHHHHTTTCCTTTTSC-----
T ss_pred             CCCEEEccccccccccccccccccCCccCcccCCHHH-hccCCCCchhhHHH---HHHHHHHHHhCCCCCccccC-----
Confidence            56799999999874             4567999998 44455678999999   8888889888 766543211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ... .......+.  ....+   ...+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       227 -~~~-~~~~~~~~~--~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          227 -NSE-TAEHIAQGL--RLYRP---HLAS----EKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             -HHH-HHHHHHTTC--CCCCC---TTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             -hhH-HHHHHhccc--CCCCC---CcCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence             111 111111111  01111   1111    346678889999999999999999998875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.26  E-value=4.6e-13  Score=100.82  Aligned_cols=109  Identities=17%  Similarity=0.066  Sum_probs=74.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              +|..|+|||. ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~t~g~~p~~~~-----  280 (343)
T 1luf_A          210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES-IFYNRYTTESDVWA---YGVVLWEIFSYGLQPYYGM-----  280 (343)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCTTTTS-----
T ss_pred             CCeEEEeecCCCcccccCccccccCCCcccceecChhh-hccCCcCcccccHH---HHHHHHHHHhcCCCcCCCC-----
Confidence            56899999998863              5678999998 44556788999999   8888889998 66554221     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                       .. .........+....     +....+    ..+..+...|++.+|.+||++.+|++.|+..
T Consensus       281 -~~-~~~~~~~~~~~~~~-----~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~  333 (343)
T 1luf_A          281 -AH-EEVIYYVRDGNILA-----CPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRM  333 (343)
T ss_dssp             -CH-HHHHHHHHTTCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             -Ch-HHHHHHHhCCCcCC-----CCCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence             11 11111222222111     111122    3567788899999999999999999999883

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.26  E-value=2.8e-12  Score=99.13  Aligned_cols=117  Identities=8%  Similarity=-0.026  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...||+|||+|+.                ||..|||||...+....+.++|+||   +|+.+.+.+||..+...   ..
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS---lG~il~ell~G~~pF~g---~~  267 (398)
T 4b99_A          194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS---VGCIFGEMLARRQLFPG---KN  267 (398)
T ss_dssp             TCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH---HHHHHHHHHHTSCSSCC---SS
T ss_pred             CCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheeh---hHHHHHHHHHCCCCCCC---CC
Confidence            56889999999973                8999999998554555688999999   88889999999866421   11


Q ss_pred             CcchhhhhHHhhhCCC-----------eeeecccccc--ccccHH-----HHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGN-----------VQELMDPVLK--ESFILE-----EILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~-----------~~~~~d~~l~--~~~~~~-----~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..............-.           ....+. .+.  ...+..     .-..+..+...|++.+|.+|||..|+++
T Consensus       268 ~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          268 YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ-SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHHHHHHHHHCCCCGGGTC-----CHHHHHH-SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh-cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1111111111110000           000000 000  000000     0124567888999999999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.25  E-value=9.3e-14  Score=101.30  Aligned_cols=108  Identities=15%  Similarity=0.097  Sum_probs=72.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+.....     
T Consensus       140 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~~-----  210 (268)
T 3sxs_A          140 DLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV-FHYFKYSSKSDVWA---FGILMWEVFSLGKMPYDLYT-----  210 (268)
T ss_dssp             TCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHH-HHHSEEETTHHHHH---HHHHHHHHHTTTCCTTTTSC-----
T ss_pred             CCCEEEccCccceecchhhhhcccCCCcCcccCCHHH-HhccCCchhhhhHH---HHHHHHHHHcCCCCCccccC-----
Confidence            56799999999874             4456999998 44445677899999   8888889998 766542211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ... .......+.  ....+..   .+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       211 -~~~-~~~~~~~~~--~~~~~~~---~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (268)
T 3sxs_A          211 -NSE-VVLKVSQGH--RLYRPHL---AS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEP  261 (268)
T ss_dssp             -HHH-HHHHHHTTC--CCCCCTT---SC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred             -hHH-HHHHHHcCC--CCCCCCc---Ch----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             111 111111111  1111111   11    246678889999999999999999999987

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.25  E-value=7.8e-14  Score=101.82  Aligned_cols=108  Identities=21%  Similarity=0.166  Sum_probs=72.5

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+....      
T Consensus       142 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~ll~~g~~p~~~~------  211 (269)
T 4hcu_A          142 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS---FGVLMWEVFSEGKIPYENR------  211 (269)
T ss_dssp             GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTC------
T ss_pred             CCCEEeccccccccccccccccccCcccccccCCHHH-hcCCCCCchhhhHH---HHHHHHHHhcCCCCCCCCC------
Confidence            46789999999874             4567999998 54556788999999   8888888888 66554221      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+.  ....+..   .+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       212 ~~~~-~~~~~~~~~--~~~~~~~---~~----~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          212 SNSE-VVEDISTGF--RLYKPRL---AS----THVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             CHHH-HHHHHHTTC--CCCCCTT---SC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHhcCc--cCCCCCc---CC----HHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            1111 111111111  1111111   11    346678889999999999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.25  E-value=1.9e-12  Score=97.13  Aligned_cols=106  Identities=15%  Similarity=0.049  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||+ ......+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~el~~g~~pf~~~------~~  246 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEV-ISRSLYATEVDIWS---LGIMVIEMVDGEPPYFSD------SP  246 (321)
T ss_dssp             TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CH
T ss_pred             CCcEEEeeeeeeeecccCccccccccCCccccCHhh-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCCC------CH
Confidence            56899999998763            7889999998 44555678899999   888899999998765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... ......     ..+.+...  ......+..+...|++.+|.+||++.++++
T Consensus       247 ~~~~-~~~~~~-----~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          247 VQAM-KRLRDS-----PPPKLKNS--HKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHH-HHHHHS-----SCCCCTTG--GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHH-HHHhcC-----CCCCcCcc--ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111 111111     11111110  011124566778999999999999999986

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.25  E-value=1.5e-13  Score=101.09  Aligned_cols=108  Identities=18%  Similarity=-0.002  Sum_probs=71.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+.....     
T Consensus       147 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~ll~~g~~p~~~~~-----  217 (288)
T 3kfa_A          147 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWA---FGVLLWEIATYGMSPYPGID-----  217 (288)
T ss_dssp             GGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTCC-----
T ss_pred             CCCEEEccCccceeccCCccccccCCccccCcCChhh-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCCCC-----
Confidence            45789999999875             4567999998 44556678999999   8888888888 554432210     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .. ..........     ....    +......+.++...|++.+|.+||++.++++.|+.
T Consensus       218 -~~-~~~~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          218 -LS-QVYELLEKDY-----RMER----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             -GG-GHHHHHHTTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HH-HHHHHHhccC-----CCCC----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence             10 1111111111     0011    11112356778889999999999999999998875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.25  E-value=1.3e-12  Score=98.13  Aligned_cols=112  Identities=8%  Similarity=-0.043  Sum_probs=72.9

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      .+||+|||+++.                   ||..|+|||. ......+.++|+|+   ||+.+++.++|..+....-..
T Consensus       148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ell~g~~Pf~~~~~~  223 (330)
T 2izr_A          148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINT-HLGKEQSRRDDLEA---LGHMFMYFLRGSLPWQGLKAD  223 (330)
T ss_dssp             SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTTTCCCS
T ss_pred             eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHH-HcCCCCCchhHHHH---HHHHHHHHhcCCCCccccccc
Confidence            399999998863                   7889999998 44555678999999   888899999998875432111


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         .+..... ........ .-...+....    . .+..+...|++.+|.+||++.+|.+.|+.
T Consensus       224 ---~~~~~~~-~i~~~~~~-~~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          224 ---TLKERYQ-KIGDTKRA-TPIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             ---SHHHHHH-HHHHHHHH-SCHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             ---cHHHHHH-HHHhhhcc-CCHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence               1111111 00000000 0000001111    1 57778889999999999999999998864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.25  E-value=1.2e-13  Score=102.80  Aligned_cols=109  Identities=14%  Similarity=-0.022  Sum_probs=72.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.              ||..|+|||. ......+.++|+|+   +|+.+++.+| |..+.....    
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~t~g~~p~~~~~----  255 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IFDRVYTIQSDVWS---FGVLLWEIFSLGASPYPGVK----  255 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTCC----
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchh-hccccccchhHHHH---HHHHHHHHHhCCCCCCcccc----
Confidence            46789999999874              4668999998 44556678999999   8888889888 665542211    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ...........+...     ......+    ..+.++...|++.+|.+||++.+|++.|+.
T Consensus       256 --~~~~~~~~~~~~~~~-----~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          256 --IDEEFCRRLKEGTRM-----RAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             --CSHHHHHHHHHTCCC-----CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --hhHHHHHHhccCccC-----CCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              011111111111110     1111112    346678889999999999999999998875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.24  E-value=7.9e-13  Score=100.04  Aligned_cols=102  Identities=14%  Similarity=0.086  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.++|..+........     
T Consensus       144 ~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~~ll~g~~Pf~~~~~~~-----  215 (336)
T 3h4j_B          144 NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS---CGIVLYVMLVGRLPFDDEFIPN-----  215 (336)
T ss_dssp             TCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHH---HHHHHHHHHHSSCSSBCSSSTT-----
T ss_pred             CCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhH---HHHHHHHHHhCCCCCCCccHHH-----
Confidence            56899999999874           7899999998444444568899999   8888889999987754311110     


Q ss_pred             hhhHHhhhCCCeeeeccc--cccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDP--VLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                           .     ...+...  .+....+    ..+..+...|++.+|.+||++.|+++
T Consensus       216 -----~-----~~~i~~~~~~~p~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          216 -----L-----FKKVNSCVYVMPDFLS----PGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             -----C-----BCCCCSSCCCCCTTSC----HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             -----H-----HHHHHcCCCCCcccCC----HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                 0     0011110  1111112    24567888999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.24  E-value=7.8e-14  Score=103.01  Aligned_cols=108  Identities=13%  Similarity=0.011  Sum_probs=72.7

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+.....   
T Consensus       153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~~---  225 (291)
T 1xbb_A          153 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWS---FGVLMWEAFSYGQKPYRGMK---  225 (291)
T ss_dssp             TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTTCCSSTTCC---
T ss_pred             CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHH-hccCCCChhhhHHH---HHHHHHHHHhcCCCCCCCCC---
Confidence            45789999998864               3467999998 44445577899999   8888899998 776543211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         . .........+...     .+..    .....+..+...|++.+|.+||++.+|++.|+.
T Consensus       226 ---~-~~~~~~~~~~~~~-----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          226 ---G-SEVTAMLEKGERM-----GCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             ---H-HHHHHHHHTTCCC-----CCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ---H-HHHHHHHHcCCCC-----CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               0 1111122222111     1111    122356778889999999999999999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.24  E-value=3.4e-12  Score=94.92  Aligned_cols=111  Identities=12%  Similarity=-0.025  Sum_probs=69.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   ||+.+++.++|..+....    ....
T Consensus       172 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~s---lG~il~~l~~g~~p~~~~----~~~~  243 (310)
T 2wqm_A          172 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER-IHENGYNFKSDIWS---LGCLLYEMAALQSPFYGD----KMNL  243 (310)
T ss_dssp             TSCEEECCC------------------CCSSCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTC-------CCH
T ss_pred             CCCEEEEeccceeeecCCCccccccCCCeeEeChHH-hCCCCCCchhhHHH---HHHHHHHHHhCCCCCccc----chhH
Confidence            56789999999864            7889999998 44556678999999   888899999998764221    1111


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..... ...........    ....+    ..+.++...|++.+|.+||++.+|++.|+.
T Consensus       244 ~~~~~-~~~~~~~~~~~----~~~~~----~~l~~li~~~l~~dp~~Rps~~~il~~l~~  294 (310)
T 2wqm_A          244 YSLCK-KIEQCDYPPLP----SDHYS----EELRQLVNMCINPDPEKRPDVTYVYDVAKR  294 (310)
T ss_dssp             HHHHH-HHHTTCSCCCC----TTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHH-HhhcccCCCCc----ccccC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            11111 11111111111    11122    246678889999999999999999999876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.24  E-value=8.5e-13  Score=96.71  Aligned_cols=104  Identities=16%  Similarity=0.068  Sum_probs=71.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||. ......+.++|+|+   ||+.+++.+++..+...         .
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~~~~~~~---------~  224 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQ-ISSQDYGKEVDLYA---LGLILAELLHVCDTAFE---------T  224 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHH-HHCSCCCTHHHHHH---HHHHHHHHHSCCSSHHH---------H
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhh-hccCCCcchhhhHH---HHHHHHHHHhcCCcchh---------H
Confidence            45789999998764           7889999998 44555678999999   88888888887654210         0


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .........+.        +...++.    .+..+...|++.+|.+||++.++++.|...
T Consensus       225 ~~~~~~~~~~~--------~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          225 SKFFTDLRDGI--------ISDIFDK----KEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             HHHHHHHHTTC--------CCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhhccc--------ccccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11111111111        1122222    355677899999999999999999999873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.24  E-value=2.2e-13  Score=101.48  Aligned_cols=108  Identities=17%  Similarity=0.042  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.++ |..+.....   .
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~~~---~  255 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES-LADRVYTSKSDVWA---FGVTMWEIATRGMTPYPGVQ---N  255 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHH-HHSSCCCHHHHHHH---HHHHHHHHHTTSCCSSTTCC---G
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchh-hcCCCccchhhhHH---HHHHHHHHHhcCCCCCccCC---H
Confidence            56899999999874              4567999998 44556678999999   8888889999 544432110   0


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..+    ......+...     ..    +......+.++...|++.+|.+||++.++++.|+.
T Consensus       256 ~~~----~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  305 (313)
T 3brb_A          256 HEM----YDYLLHGHRL-----KQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK  305 (313)
T ss_dssp             GGH----HHHHHTTCCC-----CC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH----HHHHHcCCCC-----CC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            011    1111111110     11    11122356778889999999999999999999976

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.24  E-value=7.9e-13  Score=99.10  Aligned_cols=110  Identities=18%  Similarity=0.093  Sum_probs=57.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccc---ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSY---NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~---~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.           ||..|+|||...   .....+.++|+|+   ||+.+++.++|..+.......   
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~~---  235 (327)
T 3aln_A          162 SGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWS---LGITLYELATGRFPYPKWNSV---  235 (327)
T ss_dssp             TTEEEECCCSSSCC------------------------------CCSHHHHHH---HHHHHHHHHHSCCCSSCC------
T ss_pred             CCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHH---HHHHHHHHHHCCCCCCCcchH---
Confidence            56799999999874           788999999832   2344578899999   888899999988765321100   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ..    ...  ....-..+.+...........+.++...|++.+|.+||++.++++
T Consensus       236 --~~----~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          236 --FD----QLT--QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ----------C--CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --HH----HHH--HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence              00    000  000000111111001111235677888999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.24  E-value=5e-13  Score=100.49  Aligned_cols=113  Identities=10%  Similarity=-0.050  Sum_probs=59.5

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.............
T Consensus       146 ~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~~~~~~~~~~  221 (325)
T 3kn6_A          146 LEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL-LNQNGYDESCDLWS---LGVILYTMLSGQVPFQSHDRSLTCTSA  221 (325)
T ss_dssp             CEEEECCCTTCEECCC-----------------------CCCCHHHHHHH---HHHHHHHHHHSSCTTC-------CCCH
T ss_pred             ccEEEeccccceecCCCCCcccccCCCcCccCHHH-hcCCCCCCccchHH---HHHHHHHHHhCCCCCCCCccccccccH
Confidence            4789999999874            6889999998 44555678999999   888899999998775432211110111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........+..      .............+..+...|++.+|.+||++.++++
T Consensus       222 ~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          222 VEIMKKIKKGDF------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHHHHTTTCC------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HHHHHHHHcCCC------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            111111111111      0000000112234667888999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.24  E-value=3.4e-12  Score=97.68  Aligned_cols=119  Identities=15%  Similarity=0.005  Sum_probs=74.9

Q ss_pred             ccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh-
Q 041157            3 AKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK-   72 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~-   72 (169)
                      +.+||+|||+++.         ||..|+|||. +.....+.++|+|+   +|+.+++.+||..+...........-... 
T Consensus       233 ~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~elltg~~pf~~~~~~~~~~~~~~~  308 (397)
T 1wak_A          233 LKVKIADLGNACWVHKHFTEDIQTRQYRSLEV-LIGSGYNTPADIWS---TACMAFELATGDYLFEPHSGEEYTRDEDHI  308 (397)
T ss_dssp             CCEEECCGGGCEETTBCSCSCCSCGGGCCHHH-HHTSCCCTHHHHHH---HHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred             cceEeccccccccccccCccCCCCCcccCChh-hcCCCCCcHHHHHH---HHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence            4799999999874         7999999998 43445678999999   88889999999877543222211100000 


Q ss_pred             --hHHhhh-------------------CCCeeeecccc-------c--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           73 --TWKLWC-------------------EGNVQELMDPV-------L--KESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        73 --~~~~~~-------------------~~~~~~~~d~~-------l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                        ......                   .+....+.+..       +  .-.........+..+...|++.+|.+||++.|
T Consensus       309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence              000000                   00000000000       0  00123455667889999999999999999999


Q ss_pred             HHH
Q 041157          123 VVV  125 (169)
Q Consensus       123 V~~  125 (169)
                      +++
T Consensus       389 ~l~  391 (397)
T 1wak_A          389 CLR  391 (397)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.23  E-value=7.1e-13  Score=101.45  Aligned_cols=99  Identities=6%  Similarity=-0.110  Sum_probs=67.7

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCccccc----------ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNI----------LRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~----------~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+++.         | ..|+|||+..+.          ...+.++|+|+   ||+.+++.+||..+.....
T Consensus       242 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS---lG~il~elltg~~Pf~~~~  317 (377)
T 3byv_A          242 RGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA---LGLVIYWIWCADLPITKDA  317 (377)
T ss_dssp             TCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH---HHHHHHHHHHSSCCC----
T ss_pred             CCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHH---HHHHHHHHHHCCCCCcccc
Confidence            56899999999985         6 899999983322          26788999999   8888999999887743211


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...   .            ...+.. .. ...+    ..+.++...|++.+|.+||++.++++
T Consensus       318 ~~~---~------------~~~~~~-~~-~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          318 ALG---G------------SEWIFR-SC-KNIP----QPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             --C---C------------SGGGGS-SC-CCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             ccc---c------------hhhhhh-hc-cCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            110   0            001111 00 1122    24667888999999999999999975

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=1e-13  Score=102.15  Aligned_cols=108  Identities=11%  Similarity=-0.024  Sum_probs=73.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               +|..|+|||. ......+.++|+|+   +|+.+++.+| |..+......  
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~~~--  219 (287)
T 1u59_A          146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWS---YGVTMWEALSYGQKPYKKMKG--  219 (287)
T ss_dssp             TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCTTTTCCT--
T ss_pred             CCCEEECcccceeeeccCcceeeccccccccccccCHHH-hccCCCCchhhHHH---HHHHHHHHHcCCCCCcccCCH--
Confidence            45789999998864               3577999998 44455678999999   8888889998 7766432111  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ..+    ......+...     .+..    .....+.++...|++.+|.+||++.++++.|+.
T Consensus       220 -~~~----~~~i~~~~~~-----~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          220 -PEV----MAFIEQGKRM-----ECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             -HHH----HHHHHTTCCC-----CCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHH----HHHHhcCCcC-----CCCC----CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             011    1112222111     1111    122356778889999999999999999999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.23  E-value=1.9e-13  Score=102.19  Aligned_cols=108  Identities=12%  Similarity=0.050  Sum_probs=73.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              +|..|+|||. ......+.++|+|+   +|+.+++.+| |..+....     
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~~-----  244 (322)
T 1p4o_A          174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWS---FGVVLWEIATLAEQPYQGL-----  244 (322)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHHTSCCTTTTS-----
T ss_pred             CCeEEECcCccccccccccccccccCCCCCCCccChhh-hccCCCCchhhHHH---HHHHHHHHHhcCCCccccC-----
Confidence            56899999999874              4667999998 44556778999999   8888889999 55443211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ... ........+....     .....    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       245 -~~~-~~~~~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~  296 (322)
T 1p4o_A          245 -SNE-QVLRFVMEGGLLD-----KPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKE  296 (322)
T ss_dssp             -CHH-HHHHHHHTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred             -CHH-HHHHHHHcCCcCC-----CCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence             111 1111111221111     11111    2346678889999999999999999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.23  E-value=1.7e-13  Score=100.52  Aligned_cols=108  Identities=17%  Similarity=0.061  Sum_probs=72.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+....      
T Consensus       145 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~g~~p~~~~------  214 (279)
T 1qpc_A          145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWS---FGILLTEIVTHGRIPYPGM------  214 (279)
T ss_dssp             TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTTCCSSTTC------
T ss_pred             CCCEEECCCcccccccCcccccccCCCCccCccChhh-hccCCCCchhhhHH---HHHHHHHHHhCCCCCCccc------
Confidence            56799999998874             4567999998 44455678899999   8888889998 66543211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+..  .   ......+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       215 ~~~~-~~~~~~~~~~--~---~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          215 TNPE-VIQNLERGYR--M---VRPDNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             CHHH-HHHHHHTTCC--C---CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHhcccC--C---CCccccc----HHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            1111 1111111110  0   1111122    356778889999999999999999999876

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.23  E-value=1e-13  Score=104.42  Aligned_cols=108  Identities=15%  Similarity=-0.006  Sum_probs=72.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              ++..|+|||. ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~-----  263 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWS---FGVLMWEIFTLGGSPYPGI-----  263 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHH-hcCCCcChHHHHHH---HHHHHHHHHhCCCCCcCcC-----
Confidence            56789999998863              4567999998 43455678899999   8888889888 66554211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       .... .......+...     ......    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       264 -~~~~-~~~~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          264 -PVEE-LFKLLKEGHRM-----DKPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             -CHHH-HHHHHHHTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CHHH-HHHHHhcCCCC-----CCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             1111 11111111110     111111    2346678889999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.22  E-value=3e-13  Score=99.50  Aligned_cols=107  Identities=18%  Similarity=0.196  Sum_probs=66.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcc---cccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYS---YNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~---~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.           ||..|+|||..   ......+.++|+|+   +|+.+++.+||..+....    . 
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~----~-  217 (290)
T 3fme_A          146 LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWS---LGITMIELAILRFPYDSW----G-  217 (290)
T ss_dssp             TCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHH---HHHHHHHHHHTSCSSCCC----S-
T ss_pred             CCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHH---HHHHHHHHHHCCCCcccc----C-
Confidence            46799999999874           88999999983   23445678999999   888899999998775321    0 


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............. .....    ...+    ..+.++...|++.+|.+||++.++++
T Consensus       218 ~~~~~~~~~~~~~~-~~~~~----~~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          218 TPFQQLKQVVEEPS-PQLPA----DKFS----AEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CHHHHHHHHHHSCC-CCCCT----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             chHHHHHHHhccCC-CCccc----ccCC----HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            11111111111111 01111    1112    34667888999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.22  E-value=3.7e-12  Score=93.68  Aligned_cols=106  Identities=13%  Similarity=0.024  Sum_probs=71.9

Q ss_pred             ceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHh
Q 041157            5 QKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKL   76 (169)
Q Consensus         5 ~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~   76 (169)
                      +||+|||+++.        ||..|+|||...+....+.++|+|+   +|+.+++.+||+.+......     .... ...
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~~~~~~~~-----~~~~-~~~  230 (289)
T 4fvq_A          160 IKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWS---FGTTLWEICSGGDKPLSALD-----SQRK-LQF  230 (289)
T ss_dssp             EEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHH---HHHHHHHHHTTTCCTTTTSC-----HHHH-HHH
T ss_pred             eeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHH---HHHHHHHHHcCCCCCccccc-----hHHH-HHH
Confidence            89999999975        7899999998443366788999999   88889999997654322111     1111 111


Q ss_pred             hhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           77 WCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        77 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                      .....   .+...    .    ...+.++...|++.+|.+||++.++++.|+..
T Consensus       231 ~~~~~---~~~~~----~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l  273 (289)
T 4fvq_A          231 YEDRH---QLPAP----K----AAELANLINNCMDYEPDHRPSFRAIIRDLNSL  273 (289)
T ss_dssp             HHTTC---CCCCC----S----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred             hhccC---CCCCC----C----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11100   01111    1    12356788899999999999999999999983

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.22  E-value=2.4e-12  Score=95.47  Aligned_cols=106  Identities=13%  Similarity=0.042  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.+||..+....      ..
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~------~~  221 (297)
T 3fxz_A          152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMIEGEPPYLNE------NP  221 (297)
T ss_dssp             TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHH-HHCSCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CH
T ss_pred             CCCEEEeeCCCceecCCcccccCCccCCcCccChhh-hcCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCC------CH
Confidence            56799999998763            7889999998 44455678999999   888899999998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........+. ...-.       +......+.++...|++.+|.+||++.++++
T Consensus       222 ~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          222 LRALYLIATNGT-PELQN-------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHHCS-CCCSC-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHhCCC-CCCCC-------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            111111111111 00100       1111234667888999999999999999976

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.22  E-value=3e-13  Score=101.93  Aligned_cols=104  Identities=11%  Similarity=-0.002  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.+||..+....      ...
T Consensus       150 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~------~~~  220 (328)
T 3fe3_A          150 DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWS---LGVILYTLVSGSLPFDGQ------NLK  220 (328)
T ss_dssp             TSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHH---HHHHHHHHHHSSCSSCCS------SHH
T ss_pred             CCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhh---hHHHHHHHHhCCCCCCCC------CHH
Confidence            56899999999974           7899999998444444467899999   888889999998775321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... ....+..      .+....+    ..+..+...|++.+|.+|||+.++++
T Consensus       221 ~~~~-~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          221 ELRE-RVLRGKY------RIPFYMS----TDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHH-HHHHCCC------CCCTTSC----HHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHH-HHHhCCC------CCCCCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111 1111111      0111111    23567788999999999999999976

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.21  E-value=2.7e-12  Score=95.84  Aligned_cols=118  Identities=10%  Similarity=-0.044  Sum_probs=72.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.++|+.+.......   ..
T Consensus       155 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~~~~---~~  228 (311)
T 3niz_A          155 DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS---IGCIFAEMITGKPLFPGVTDD---DQ  228 (311)
T ss_dssp             TCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHH---HHHHHHHHHHSSCSCCCSSTT---TH
T ss_pred             CCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHH---HHHHHHHHHhCCCCCCCCChH---HH
Confidence            56789999998864            6889999998444455678999999   888899999998665432211   11


Q ss_pred             hhhhHHhhhCCC----------------eeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGN----------------VQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~----------------~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ............                .....+..............+.++...|++.+|.+||++.|+++
T Consensus       229 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            111111110000                00001100000000011134667888999999999999999986

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.21  E-value=3.3e-13  Score=101.22  Aligned_cols=108  Identities=13%  Similarity=0.004  Sum_probs=72.8

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.           ++..|+|||. ......+.++|+|+   +|+.+++.+| |..+....      ..
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~pf~~~------~~  247 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWS---YGVLLWEIVSLGGTPYCGM------TC  247 (327)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCTTTTC------CH
T ss_pred             CCeEEEcccCcCccccccccccCCCCCccccChhh-hccccCCchhcchH---HHHHHHHHHcCCCCCCCCC------cH
Confidence            46789999999874           5778999998 44445678999999   8888889888 76654221      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .......+.     ........+    ..+..+...|++.+|.+||++.++++.|+.
T Consensus       248 ~~-~~~~~~~~~-----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          248 AE-LYEKLPQGY-----RLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             HH-HHHHGGGTC-----CCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHHHhhcCC-----CCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11 111111111     001111112    346778889999999999999999998876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.21  E-value=3.1e-12  Score=98.86  Aligned_cols=111  Identities=12%  Similarity=-0.053  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||+ +.....+.++|+|+   ||+.+++.++|..+........   ..
T Consensus       200 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~~~~---~~  272 (400)
T 1nxk_A          200 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWS---LGVIMYILLCGYPPFYSNHGLA---IS  272 (400)
T ss_dssp             TCCEEECCCTTCEECC-----------CTTCCGGG-SCCCCSSSHHHHHH---HHHHHHHHHHSSCSCCCCTTCS---SC
T ss_pred             CccEEEEecccccccCCCCccccCCCCCCccCHhh-cCCCCCCCcccHHH---HHHHHHHHHhCCCCCCCCcccc---cc
Confidence            57799999999874           6889999998 54556678999999   8888999999987754322111   10


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........+.. ..-.+.. ...+    ..+..+...|++.+|.+||++.++++
T Consensus       273 ~~~~~~i~~~~~-~~~~~~~-~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          273 PGMKTRIRMGQY-EFPNPEW-SEVS----EEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             CSHHHHHHHTCC-CCCTTTT-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCcc-cCCCccc-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            001111111111 0001100 1112    34667888999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.21  E-value=5.2e-12  Score=96.05  Aligned_cols=119  Identities=13%  Similarity=-0.002  Sum_probs=72.4

Q ss_pred             ccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 041157            3 AKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKT   73 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~   73 (169)
                      ..+||+|||+++.         ||..|+|||. ......+.++|+|+   +|+.+++.+||..+.....+.....-....
T Consensus       175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEV-LLGAPWGCGADIWS---TACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHH-HHTCCCCTHHHHHH---HHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             ceEEEcccccccccCCCCCCCCCCccccCcHH-HhCCCCCchHhHHH---HHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            4689999999874         8899999998 43445678999999   888899999998775432211100000000


Q ss_pred             ---HHh------------------hhCCC-eeeeccc-------cc--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           74 ---WKL------------------WCEGN-VQELMDP-------VL--KESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        74 ---~~~------------------~~~~~-~~~~~d~-------~l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                         ...                  +.... ...+...       .+  ....+......+.++...|++.+|.+||++.+
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence               000                  00000 0000000       00  01123455667888999999999999999999


Q ss_pred             HHH
Q 041157          123 VVV  125 (169)
Q Consensus       123 V~~  125 (169)
                      +++
T Consensus       331 ll~  333 (373)
T 1q8y_A          331 LVN  333 (373)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.21  E-value=1.6e-13  Score=101.08  Aligned_cols=109  Identities=15%  Similarity=-0.007  Sum_probs=72.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.               ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+....    
T Consensus       157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~----  228 (291)
T 1u46_A          157 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTRTFSHASDTWM---FGVTLWEMFTYGQEPWIGL----  228 (291)
T ss_dssp             TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTSCCTTTTC----
T ss_pred             CCCEEEccccccccccccccchhhhccCCCCceeeCchh-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCcccC----
Confidence            45789999998764               4557999998 44445578899999   8888889998 66654321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ............+..     .....    .....+.++...|++.+|.+||++.++++.|+.
T Consensus       229 --~~~~~~~~~~~~~~~-----~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  281 (291)
T 1u46_A          229 --NGSQILHKIDKEGER-----LPRPE----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  281 (291)
T ss_dssp             --CHHHHHHHHHTSCCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CHHHHHHHHHccCCC-----CCCCc----CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence              111111111111110     00111    112356778889999999999999999999986

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.20  E-value=1.4e-13  Score=104.52  Aligned_cols=54  Identities=11%  Similarity=-0.077  Sum_probs=44.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.         ||..|+|||. +.....+.++|+|+   +|+.+++.+||..+..
T Consensus       198 ~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~  260 (360)
T 3llt_A          198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEV-ILNLGWDVSSDMWS---FGCVLAELYTGSLLFR  260 (360)
T ss_dssp             CCCEEECCCTTCEETTSCCCSCCSCGGGCCHHH-HTTCCCCTTHHHHH---HHHHHHHHHHSSCSCC
T ss_pred             CCCEEEEeccCceecCCCCcCccCcccccCcHH-HcCCCCCCccchHH---HHHHHHHHHHCCCCCC
Confidence            56789999999974         7899999998 43455678999999   8888999999987653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.20  E-value=3.5e-14  Score=106.59  Aligned_cols=115  Identities=10%  Similarity=-0.043  Sum_probs=72.1

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC----
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL----   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~----   62 (169)
                      +..+||+|||+++.               ++..|+|||. ......+.++|+|+   +|+.+++.+||..+.....    
T Consensus       181 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~tg~~~~~~~~~~~~  256 (326)
T 2w1i_A          181 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES-LTESKFSVASDVWS---FGVVLYELFTYIEKSKSPPAEFM  256 (326)
T ss_dssp             TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHHTTCGGGSHHHHHH
T ss_pred             CCcEEEecCcchhhccccccccccccCCCCceeEECchh-hcCCCCCchhhHHH---HHHHHHHHHhcCCCCCCCHHHHH
Confidence            46789999998864               3456999998 43445578899999   8888889999876543210    


Q ss_pred             ---CCCC--cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 ---GEGG--FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ---~~~~--~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         +...  .............+.         ....+......+..+...|++.+|.+||++.+|++.|+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          257 RMIGNDKQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HhhccccchhhhHHHHHHHhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               0000  000000111111110         000111222457778899999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.20  E-value=5e-13  Score=99.60  Aligned_cols=107  Identities=12%  Similarity=0.097  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc----------cccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN----------ILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~----------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.              |+..|+|||...+          ....+.++|+|+   ||+.+++.++|+.+
T Consensus       162 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p  238 (313)
T 3cek_A          162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS---LGCILYYMTYGKTP  238 (313)
T ss_dssp             TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHH---HHHHHHHHHHSSCT
T ss_pred             CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHH---HHHHHHHHHhCCCc
Confidence            35689999998864              6889999998322          135677899999   88889999999876


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......     .......         ++++......+......+..+...|++.+|.+||++.++++
T Consensus       239 f~~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          239 FQQIIN-----QISKLHA---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             TTTCCS-----HHHHHHH---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhHHH-----HHHHHHH---------HHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            532111     1111111         11111111111111134667788999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.20  E-value=5.2e-12  Score=98.11  Aligned_cols=109  Identities=14%  Similarity=0.007  Sum_probs=68.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++.+||+|||+++.           ||.+|+|||+..+  ....+.++|+|+   +|+.+++.+||..+........  .
T Consensus       278 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diws---lG~il~~lltg~~pf~~~~~~~--~  352 (419)
T 3i6u_A          278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS---LGVILFICLSGYPPFSEHRTQV--S  352 (419)
T ss_dssp             SCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHH---HHHHHHHHHHSSCSSCCCSSSC--C
T ss_pred             cceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHh---HHHHHHHHHHCCCCCCCCcchH--H
Confidence            35699999999975           7899999998432  234567899999   8888999999987754321111  1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +.    .....+... . .+....    .....+.++...|++.+|.+||++.++++
T Consensus       353 ~~----~~i~~~~~~-~-~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          353 LK----DQITSGKYN-F-IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HH----HHHHTTCCC-C-CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HH----HHHhcCCCC-C-Cchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            11    111111110 0 011101    11234677888999999999999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.20  E-value=9.6e-12  Score=92.92  Aligned_cols=124  Identities=11%  Similarity=-0.018  Sum_probs=77.6

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccc-------cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYN-------ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~-------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      ..+||+|||+++.           ||..|+|||....       ....+.++|+|+   ||+.+++.+||..+.......
T Consensus       153 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~~~~  229 (319)
T 4euu_A          153 SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS---IGVTFYHAATGSLPFRPFEGP  229 (319)
T ss_dssp             EEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHH---HHHHHHHHHHSSCSEECTTCG
T ss_pred             ceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCcc
Confidence            4589999999874           7889999998321       245678899999   888899999998775432211


Q ss_pred             CC-cchhhhhHHhhhCCCeeeec---------cccc--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GG-FGPVYKTWKLWCEGNVQELM---------DPVL--KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~-~~lv~~~~~~~~~~~~~~~~---------d~~l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. ..................+-         ...+  ...........+..+...|++.+|.+||++.|+++....
T Consensus       230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            11 11111111111111111110         0011  112234555567788899999999999999999988765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.19  E-value=6.3e-12  Score=93.00  Aligned_cols=106  Identities=10%  Similarity=0.028  Sum_probs=68.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccc--cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNIL--RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~--~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +.++||+|||+++.            ||..|+|||...+..  ..+.++|+|+   +|+.+++.++|..+....      
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~------  243 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWA---MGVTLYCFVFGQCPFMDE------  243 (298)
T ss_dssp             TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHH---HHHHHHHHHHSSCSSCCS------
T ss_pred             CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHh---HHHHHHHHHHCCCCCCCc------
Confidence            56799999998863            788999999833222  1367889999   888889999998765321      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....+.. ....... ..  +. ....+    ..+..+...|++.+|.+||++.++++
T Consensus       244 ~~~~~~~-~~~~~~~-~~--~~-~~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          244 RIMCLHS-KIKSQAL-EF--PD-QPDIA----EDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SHHHHHH-HHHHCCC-CC--CS-SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cHHHHHH-HHhcccC-CC--CC-ccccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1111111 1111111 00  00 01112    24667888999999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.19  E-value=2.4e-13  Score=98.86  Aligned_cols=108  Identities=20%  Similarity=0.147  Sum_probs=72.0

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   +|+.+++.++ |..+....      
T Consensus       140 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~~g~~p~~~~------  209 (267)
T 3t9t_A          140 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS---FGVLMWEVFSEGKIPYENR------  209 (267)
T ss_dssp             GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTC------
T ss_pred             CCCEEEcccccccccccccccccccccccccccChhh-hcCCCccchhchhh---hHHHHHHHhccCCCCCCCC------
Confidence            46789999999874             4567999998 44556678999999   8888888888 56553221      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+.  ....+.   ..    ...+.++...|++.+|.+||++.++++.|+.
T Consensus       210 ~~~~-~~~~i~~~~--~~~~~~---~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          210 SNSE-VVEDISTGF--RLYKPR---LA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             CHHH-HHHHHHTTC--CCCCCT---TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHhcCC--cCCCCc---cC----cHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1111 111111111  011111   11    1346678889999999999999999999876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.19  E-value=2.3e-13  Score=102.10  Aligned_cols=108  Identities=13%  Similarity=0.036  Sum_probs=71.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              |+..|+|||. ......+.++|+|+   ||+.+++.+| |..+....     
T Consensus       179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~ellt~g~~p~~~~-----  249 (327)
T 2yfx_A          179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA-FMEGIFTSKTDTWS---FGVLLWEIFSLGYMPYPSK-----  249 (327)
T ss_dssp             TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             cceEEECccccccccccccccccCCCcCCCcceeCHhH-hcCCCCCchhhHHH---HHHHHHHHHcCCCCCCCCc-----
Confidence            34689999998863              5778999998 44556678999999   8888888888 55443211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                       ... ........+...     ......+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       250 -~~~-~~~~~~~~~~~~-----~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          250 -SNQ-EVLEFVTSGGRM-----DPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             -CHH-HHHHHHHTTCCC-----CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CHH-HHHHHHhcCCCC-----CCCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence             011 111111111110     0111122    346678889999999999999999998876

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.19  E-value=1.6e-12  Score=100.80  Aligned_cols=98  Identities=8%  Similarity=-0.041  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCccc---------ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSY---------NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~---------~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      +..+||+|||+++.         | .+|+|||...         .....+.++|+|+   ||+.+++.+||+.+......
T Consensus       247 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS---lGvil~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          247 RGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT---LGLAIYWIWCADLPNTDDAA  322 (413)
T ss_dssp             TCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH---HHHHHHHHHHSSCCCCTTGG
T ss_pred             CCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH---HHHHHHHHHHCCCCCCCcch
Confidence            56799999999874         7 9999999832         3334567999999   88889999999887532111


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                      ..               ....++...  ...+    ..+..+...|++.+|.+||++.+++
T Consensus       323 ~~---------------~~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          323 LG---------------GSEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             GS---------------CSGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             hh---------------hHHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence            10               000111100  1122    3466788899999999999977763

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.18  E-value=1.3e-12  Score=98.71  Aligned_cols=98  Identities=11%  Similarity=-0.002  Sum_probs=68.8

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+++.++|..+.....        
T Consensus       166 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~~--------  234 (335)
T 3dls_A          166 DFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWS---LGVTLYTLVFEENPFCELE--------  234 (335)
T ss_dssp             TSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHH---HHHHHHHHHHSSCSCSSGG--------
T ss_pred             CCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchh---HHHHHHHHHhCCCchhhHH--------
Confidence            56899999999874           7899999998443434478899999   8888889999988753210        


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          .... ..   ...+.   ..+    ..+..+...|++.+|.+||++.++++
T Consensus       235 ----~~~~-~~---~~~~~---~~~----~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          235 ----ETVE-AA---IHPPY---LVS----KELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             ----GGTT-TC---CCCSS---CCC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----HHHh-hc---cCCCc---ccC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence                0000 00   00010   112    24567888999999999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.18  E-value=1.3e-12  Score=96.26  Aligned_cols=105  Identities=11%  Similarity=0.133  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          ||..|+|||. +. ...+.++|+|+   +|+.+++.++|..+.....     ....
T Consensus       168 ~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~-~~-~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~~-----~~~~  237 (290)
T 1t4h_A          168 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM-YE-EKYDESVDVYA---FGMCMLEMATSEYPYSECQ-----NAAQ  237 (290)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGG-GG-TCCCTHHHHHH---HHHHHHHHHHSSCTTTTCS-----SHHH
T ss_pred             CCCEEEeeCCCcccccccccccccCCcCcCCHHH-Hh-ccCCCcchHHH---HHHHHHHHHhCCCCCCCcC-----cHHH
Confidence            56799999999864          8899999997 43 34678999999   8888999999987753211     1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+....    ......+    ..+.++...|++.+|.+||++.++++
T Consensus       238 -~~~~~~~~~~~~----~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          238 -IYRRVTSGVKPA----SFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -HHHHHTTTCCCG----GGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHhccCCcc----ccCCCCC----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence             111111111111    1111111    24677888999999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.18  E-value=3.8e-13  Score=102.14  Aligned_cols=106  Identities=16%  Similarity=0.054  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.        ||..|+|||...  .....+.++|+|+   ||+.+++.+||..+....      ....
T Consensus       190 ~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diws---lG~il~ell~g~~p~~~~------~~~~  260 (348)
T 1u5q_A          190 PGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNM------NAMS  260 (348)
T ss_dssp             TTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CHHH
T ss_pred             CCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCC------ChHH
Confidence            56799999999875        889999999832  2345577899999   888899999998764321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......... .....    ...++    ..+..+...|++.+|.+||++.++++
T Consensus       261 ~~~~~~~~~-~~~~~----~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          261 ALYHIAQNE-SPALQ----SGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHHHSC-CCCCC----CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHhcC-CCCCC----CCCCC----HHHHHHHHHHcccChhhCcCHHHHhh
Confidence            111111111 10111    11122    23566778999999999999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.18  E-value=5.6e-14  Score=104.09  Aligned_cols=115  Identities=11%  Similarity=-0.011  Sum_probs=72.2

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC--
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE--   64 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~--   64 (169)
                      +..+||+|||+++.               ||..|+|||. ......+.++|+|+   +|+.+++.+||..+.......  
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~~~~  237 (302)
T 4e5w_A          162 EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPEC-LMQSKFYIASDVWS---FGVTLHELLTYCDSDSSPMALFL  237 (302)
T ss_dssp             TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             CCCEEECcccccccccCCCcceeccCCCCCCccccCCee-ecCCCCCcchhHHH---HHHHHHHHHHccCCCcchhhHHh
Confidence            45789999998864               5566999998 43445568899999   888899999987653221000  


Q ss_pred             ------CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 ------GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ------~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                            .+.............+.         ....+......+.++...|++.+|.+||++.++++.|+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          238 KMIGPTHGQMTVTRLVNTLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHHCSCCGGGHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hccCCcccccCHHHHHHHHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence                  00000000001111110         000111222457788899999999999999999999975

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.18  E-value=8.2e-13  Score=99.21  Aligned_cols=107  Identities=11%  Similarity=0.058  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||..|+|||...+....+.++|+|+   +|+.+++.+||..+.......   
T Consensus       141 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~~~~---  214 (323)
T 3tki_A          141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS---CGIVLTAMLAGELPWDQPSDS---  214 (323)
T ss_dssp             TCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHH---HHHHHHHHHHSSCSCSSSCTT---
T ss_pred             CCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHH---HHHHHHHHHhCCCCCCCCchH---
Confidence            46789999998863              7889999998433333467899999   888899999998876432111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...   ...+....  ....+  ....+    ..+.++...|++.+|.+||++.|+++
T Consensus       215 ~~~---~~~~~~~~--~~~~~--~~~~~----~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          215 CQE---YSDWKEKK--TYLNP--WKKID----SAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             SHH---HHHHHTTC--TTSTT--GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHH---HHHHhccc--ccCCc--cccCC----HHHHHHHHHHccCChhhCcCHHHHhh
Confidence            011   11111110  00110  01111    24567888999999999999999976

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.17  E-value=1.8e-11  Score=91.19  Aligned_cols=112  Identities=7%  Similarity=-0.034  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.             |+..|+|||. ......+.++|+|+   ||+.+++.+||..+....       
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~-------  238 (309)
T 2h34_A          170 DDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPER-FSESHATYRADIYA---LTCVLYECLTGSPPYQGD-------  238 (309)
T ss_dssp             TSCEEECSCCC----------------CCGGGCCGGG-TCC----CCCHHHH---HHHHHHHHHHSSCSSCSC-------
T ss_pred             CCCEEEecCccCccccccccccccccCCCcCccCHHH-HcCCCCCchHhHHH---HHHHHHHHHHCCCCCCCc-------
Confidence            46789999998764             6788999998 44455678899999   888899999988765321       


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-CHHHHHHHHhcCC
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-TMSSVVVMLATDT  131 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-~m~~V~~~L~~~~  131 (169)
                      -............ .. . ..+....+    ..+..+...|++.+|.+|| ++.++++.|+...
T Consensus       239 ~~~~~~~~~~~~~-~~-~-~~~~~~~~----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          239 QLSVMGAHINQAI-PR-P-STVRPGIP----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             HHHHHHHHHHSCC-CC-G-GGTSTTCC----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             hHHHHHHHhccCC-CC-c-cccCCCCC----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            1111111111111 00 0 01111112    2466788899999999999 9999999998733

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.17  E-value=2.1e-12  Score=95.49  Aligned_cols=111  Identities=15%  Similarity=0.097  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC-----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +..+||+|||+++.                 ||..|+|||........+.++|+|+   +|+.+++..||..+...... 
T Consensus       157 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~-  232 (303)
T 2vwi_A          157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS---FGITAIELATGAAPYHKYPP-  232 (303)
T ss_dssp             TCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHH---HHHHHHHHHHSSCTTTTSCG-
T ss_pred             CCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHH---HHHHHHHHHhCCCCCccCch-
Confidence            56799999998742                 7889999998333345678999999   88889999998876533111 


Q ss_pred             CCcchhhhhHHhhhCCC--e-eeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           65 GGFGPVYKTWKLWCEGN--V-QELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~--~-~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                           ............  . ....++.+...++    ..+.++...|++.+|.+||++.++++
T Consensus       233 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          233 -----MKVLMLTLQNDPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             -----GGHHHHHHTSSCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -----hhHHHHHhccCCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhh
Confidence                 111111111100  0 0111222222222    24667888999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.17  E-value=8.6e-12  Score=97.30  Aligned_cols=109  Identities=15%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccc------cccCCccccCCCCCCcCHHHHHHHH-hCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYN------ILRGNKKVESQELPLFPLDLIHEAT-RNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~------~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~   58 (169)
                      ++.+||+|||+++.                ||.+|+|||...+      ....+.++|+|+   +|+.+++.+| |..+.
T Consensus       164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwS---lG~il~ellt~g~~Pf  240 (434)
T 2rio_A          164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS---MGCVFYYILSKGKHPF  240 (434)
T ss_dssp             SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHH---HHHHHHHHHTTSCCTT
T ss_pred             ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHh---HHHHHHHHHhCCCCCC
Confidence            45799999998863                7889999998332      245678999999   8888889998 66554


Q ss_pred             CCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           59 ENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        59 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......    .    ..... +.. ..  +.+...........+..+...|++.+|.+||++.+|++
T Consensus       241 ~~~~~~----~----~~i~~-~~~-~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          241 GDKYSR----E----SNIIR-GIF-SL--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CSTTTH----H----HHHHH-TCC-CC--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCchhh----H----HHHhc-CCC-Cc--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            221110    0    01111 110 00  01111112334456778899999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.16  E-value=2.6e-12  Score=95.15  Aligned_cols=112  Identities=13%  Similarity=0.043  Sum_probs=74.4

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +.++||+|||+++.             ||..|+|||. ......+.++|+|+   +|+.+++.+||..+....      .
T Consensus       147 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~ll~g~~pf~~~------~  216 (294)
T 4eqm_A          147 NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ-AKGEATDECTDIYS---IGIVLYEMLVGEPPFNGE------T  216 (294)
T ss_dssp             TSCEEECCCSSSTTC-------------CCSSCCHHH-HHTCCCCTTHHHHH---HHHHHHHHHHSSCSSCSS------C
T ss_pred             CCCEEEEeCCCccccccccccccCccccCccccCHhH-hcCCCCCchHhHHH---HHHHHHHHHhCCCCCCCC------C
Confidence            56799999999864             7899999998 44455678899999   888899999998775321      1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-CHHHHHHHHhc
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-TMSSVVVMLAT  129 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-~m~~V~~~L~~  129 (169)
                      ........... .... ....+....    ...+..+...|++.+|.+|| ++.++.+.|+.
T Consensus       217 ~~~~~~~~~~~-~~~~-~~~~~~~~~----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          217 AVSIAIKHIQD-SVPN-VTTDVRKDI----PQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHHHHSS-CCCC-HHHHSCTTS----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             hHHHHHHHhhc-cCCC-cchhcccCC----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            11111111111 1100 111111112    23567788899999999999 89999999987

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.16  E-value=4.3e-12  Score=93.51  Aligned_cols=118  Identities=12%  Similarity=0.027  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+.+.+||..+.....   ....
T Consensus       136 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~~---~~~~  209 (288)
T 1ob3_A          136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWS---VGCIFAEMVNGTPLFPGVS---EADQ  209 (288)
T ss_dssp             TSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHH
T ss_pred             CCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCC---HHHH
Confidence            56799999998863            7889999998444445678999999   8888889999886643211   0011


Q ss_pred             hhhhHHhhhCC------Cee--eecccccc-------ccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEG------NVQ--ELMDPVLK-------ESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~------~~~--~~~d~~l~-------~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........      ...  ...++...       .......-..+.++...|++.+|.+||++.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11111111000      000  00111110       0000111234567888999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.16  E-value=5.7e-13  Score=108.95  Aligned_cols=108  Identities=14%  Similarity=-0.047  Sum_probs=71.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ++..|+|||. ......+.++|+|+   ||+.+++.++ |..+....      
T Consensus       527 ~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~DiwS---lG~il~ellt~g~~Pf~~~------  596 (656)
T 2j0j_A          527 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-INFRRFTSASDVWM---FGVCMWEILMHGVKPFQGV------  596 (656)
T ss_dssp             TTEEEECCCCCCCSCCC----------CCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTC------
T ss_pred             CCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHH-hcCCCCCchhhHHH---HHHHHHHHHHcCCCCCCCC------
Confidence            46789999999985             4568999998 44556778999999   8888888887 55443211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..... ......+...     .+..    .....+..+...|++.+|.+||++.++++.|+.
T Consensus       597 ~~~~~-~~~i~~~~~~-----~~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          597 KNNDV-IGRIENGERL-----PMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             CHHHH-HHHHHHTCCC-----CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHH-HHHHHcCCCC-----CCCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            11111 1111111110     0111    122356778889999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=94.98  Aligned_cols=122  Identities=10%  Similarity=-0.022  Sum_probs=77.4

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccc-------cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYN-------ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~-------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      ..+||+|||+++.           ||..|+|||...+       ....+.++|+|+   ||+.+++.+||..+.....+.
T Consensus       153 ~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwS---lG~il~el~tg~~Pf~~~~~~  229 (396)
T 4eut_A          153 SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS---IGVTFYHAATGSLPFRPFEGP  229 (396)
T ss_dssp             EEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHH---HHHHHHHHHHSSCSEECTTCT
T ss_pred             eeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHH---HHHHHHHHHHCCCCCCCCCcc
Confidence            4589999999974           7899999998322       134567899999   888899999998876432221


Q ss_pred             CCcchhhhhHHhhhCC---Ceeee---cc------ccc--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEG---NVQEL---MD------PVL--KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~---~~~~~---~d------~~l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..  ............   ....+   ..      ..+  ...........+..+...|++.+|.+||++.++++.++.
T Consensus       230 ~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          230 RR--NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             TT--CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             cc--hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            11  111111111111   11110   00      011  111234555667788999999999999999999888765

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.16  E-value=2.4e-12  Score=99.27  Aligned_cols=118  Identities=10%  Similarity=0.010  Sum_probs=71.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.++|..+....   ......
T Consensus       178 ~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS---lG~il~ell~g~~pf~~~---~~~~~l  251 (394)
T 4e7w_A          178 SGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWS---TGCVMAELMQGQPLFPGE---SGIDQL  251 (394)
T ss_dssp             TTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSSCCS---SHHHHH
T ss_pred             CCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCC---CHHHHH
Confidence            56789999999874           6788999998444455788999999   888899999998664321   110111


Q ss_pred             hhhHHhhhCC----------Ceeeeccccccc-----cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEG----------NVQELMDPVLKE-----SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~----------~~~~~~d~~l~~-----~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........          ...+..-+....     .+.......+..+...|++.+|.+||++.++++
T Consensus       252 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          252 VEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            1111100000          000000000000     000111235678889999999999999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.16  E-value=1e-11  Score=94.86  Aligned_cols=40  Identities=5%  Similarity=-0.012  Sum_probs=33.4

Q ss_pred             CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157           16 GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus        16 gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      ||..|+|||...+....+.++|+||   +|+.+.+.+||+.|.
T Consensus       208 GT~~Y~APE~l~~~~~y~~~~DiWS---lG~il~ell~G~~Pf  247 (361)
T 4f9c_A          208 GTPGFRAPEVLTKCPNQTTAIDMWS---AGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CCGGGCCHHHHTTCSCCCTHHHHHH---HHHHHHHHHHTCSSS
T ss_pred             cCccccCHHHHcCCCCCCCccchhh---hHHHHHHHHHCCCCC
Confidence            8999999998444455678899999   888899999998765

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.16  E-value=2.1e-12  Score=97.41  Aligned_cols=115  Identities=11%  Similarity=-0.060  Sum_probs=58.8

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          ||..|+|||. ......+.++|+|+   +|+.+++.++|..+........   ...
T Consensus       167 ~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~~~---~~~  239 (336)
T 3fhr_A          167 DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV-LGPEKYDKSCDMWS---LGVIMYILLCGFPPFYSNTGQA---ISP  239 (336)
T ss_dssp             TCCEEECCCTTCEEC-----------------------CHHHHHHHHHH---HHHHHHHHHHSSCCC-------------
T ss_pred             CceEEEeccccceeccccccccCCCCcCccChhh-hCCCCCCchhhHHH---HHHHHHHHHHCCCCCCCccchh---hhh
Confidence            34589999998874          7889999998 44455567899999   8888999999987753221110   000


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      .......      .....+...........+.++...|++.+|.+||++.++++  .+..
T Consensus       240 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          240 GMKRRIR------LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             -----------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hHHHhhh------ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence            0000000      00000000000111234667888999999999999999987  4444

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.16  E-value=4.2e-13  Score=98.29  Aligned_cols=108  Identities=11%  Similarity=-0.072  Sum_probs=72.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   ||+.+++.+||..+....      ..
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~------~~  221 (279)
T 2w5a_A          152 KQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ-MNRMSYNEKSDIWS---LGCLLYELCALMPPFTAF------SQ  221 (279)
T ss_dssp             SSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHH-HHCC-CCHHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCEEEecCchheeeccccccccccCCCccccChHH-hccCCCCchhhHHH---HHHHHHHHHHCCCCCccc------CH
Confidence            56799999998863            7899999998 44455678899999   888889999987764321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .......+...     .+...++    ..+.++...|++.+|.+||++.++++.+..
T Consensus       222 ~~-~~~~i~~~~~~-----~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          222 KE-LAGKIREGKFR-----RIPYRYS----DELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HH-HHHHHHHTCCC-----CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HH-HHHHHhhcccc-----cCCcccC----HHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            11 11111112111     1111122    346678889999999999999999986643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.16  E-value=9.3e-13  Score=95.81  Aligned_cols=110  Identities=15%  Similarity=0.131  Sum_probs=71.3

Q ss_pred             cccceeeeeEeecC-------CCCCCCCCCcccccc--cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE-------GRTGDDDEGYSYNIL--RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------gt~~y~ape~~~~~~--~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||++..       ||..|+|||...+..  ..+.++|+|+   ||+.+++.+||..+....      .....
T Consensus       149 ~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~el~~g~~p~~~~------~~~~~  219 (271)
T 3kmu_A          149 DMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWS---FAVLLWELVTREVPFADL------SNMEI  219 (271)
T ss_dssp             TSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHH---HHHHHHHHHHCSCTTTTS------CHHHH
T ss_pred             CcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHH---HHHHHHHHHhCCCCcccc------ChHHH
Confidence            45788988876654       789999999833222  2234799999   888899999988775321      11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .......+.     .+.+....+    ..+.++...|++.+|.+||++.++++.|+.
T Consensus       220 ~~~~~~~~~-----~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~  267 (271)
T 3kmu_A          220 GMKVALEGL-----RPTIPPGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEK  267 (271)
T ss_dssp             HHHHHHSCC-----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCC-----CCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            111111111     111111122    346678889999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.15  E-value=2.6e-12  Score=97.32  Aligned_cols=118  Identities=8%  Similarity=-0.028  Sum_probs=73.1

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...+....+.++|+|+   ||+.+++.+||..+.....   .....
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s---lG~il~ell~g~~pf~~~~---~~~~~  241 (360)
T 3e3p_A          168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWS---VGCIFAEMMLGEPIFRGDN---SAGQL  241 (360)
T ss_dssp             TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSSCCSS---HHHHH
T ss_pred             CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHH---HHHHHHHHHhCCCCcCCCC---hHHHH
Confidence            57899999999975           7888999998444455688999999   8888999999986653211   11111


Q ss_pred             hhhHHhhhCCC--eeeeccccc----------------cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGN--VQELMDPVL----------------KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~--~~~~~d~~l----------------~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........  ....+++..                ...........+..+...|++.+|.+||++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          242 HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            11111100000  000000000                00001112346778999999999999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.15  E-value=1.1e-11  Score=90.78  Aligned_cols=103  Identities=13%  Similarity=0.013  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..          |+..|+|||. ......+.++|+|+   +|+.+++.++|..+....      ....
T Consensus       145 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~------~~~~  214 (279)
T 3fdn_A          145 AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWS---LGVLCYEFLVGKPPFEAN------TYQE  214 (279)
T ss_dssp             TSCEEECSCCEESCC--------CCCCTTCCHHH-HTTCCCCTTHHHHH---HHHHHHHHHHSSCTTCCS------SHHH
T ss_pred             CCCEEEEeccccccCCcccccccCCCCCccCHhH-hccCCCCccchhHh---HHHHHHHHHHCCCCCCCC------cHHH
Confidence            56799999999865          7899999998 44555678899999   888889999988765321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ........      ...+....+    ..+..+...|++.+|.+||++.++++
T Consensus       215 -~~~~~~~~------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          215 -TYKRISRV------EFTFPDFVT----EGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             -HHHHHHHT------CCCCCTTSC----HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHhC------CCCCCCcCC----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence             11111111      111111111    24567888999999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.15  E-value=1.5e-12  Score=98.78  Aligned_cols=108  Identities=13%  Similarity=0.009  Sum_probs=67.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||+ ......+.++|+|+   ||+.+++.++|..+.......      
T Consensus       187 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~~~------  256 (349)
T 2w4o_A          187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI-LRGCAYGPEVDMWS---VGIITYILLCGFEPFYDERGD------  256 (349)
T ss_dssp             TCCEEECCCC----------------CGGGSCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCTTCCTTCH------
T ss_pred             CCCEEEccCccccccCcccccccccCCCCccCHHH-hcCCCCCcccchHH---HHHHHHHHHhCCCCCCCCccc------
Confidence            57899999999874           7889999998 44445678999999   888899999998765321110      


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ............ ....+.. ...+    ..+.++...|++.+|.+||++.++++
T Consensus       257 ~~~~~~i~~~~~-~~~~~~~-~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          257 QFMFRRILNCEY-YFISPWW-DEVS----LNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHTTCC-CCCTTTT-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhCCC-ccCCchh-hhCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111111111111 1111111 1112    34667888999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.15  E-value=8.7e-12  Score=95.50  Aligned_cols=107  Identities=7%  Similarity=-0.135  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||.+|+|||+ +.....+.++|+|+   ||+.+++.++|..+....      ...
T Consensus       225 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~elltg~~pf~~~------~~~  294 (373)
T 2x4f_A          225 AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV-VNYDFVSFPTDMWS---VGVIAYMLLSGLSPFLGD------NDA  294 (373)
T ss_dssp             TTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHH-HTTCBCCHHHHHHH---HHHHHHHHHHSSCTTCCS------SHH
T ss_pred             CCcEEEEeCCCceecCCccccccccCCCcEeChhh-ccCCCCCcHHhHHH---HHHHHHHHHhCCCCCCCC------CHH
Confidence            45789999999874           7899999998 44556678999999   888899999998765321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ......... .. .... ......+    ..+..+...|++.+|.+||++.++++
T Consensus       295 ~~~~~i~~~-~~-~~~~-~~~~~~~----~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          295 ETLNNILAC-RW-DLED-EEFQDIS----EEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHHT-CC-CSCS-GGGTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhc-cC-CCCh-hhhccCC----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            111111111 00 0111 1111112    34667888999999999999999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.15  E-value=8.4e-13  Score=98.17  Aligned_cols=117  Identities=9%  Similarity=-0.122  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+....   ......
T Consensus       156 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~---~~~~~~  228 (308)
T 3g33_A          156 GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV-LLQSTYATPVDMWS---VGCIFAEMFRRKPLFCGN---SEADQL  228 (308)
T ss_dssp             TSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHH-HHTSCCCSTHHHHH---HHHHHHHTTTSSCSCCCS---SHHHHH
T ss_pred             CCCEEEeeCccccccCCCcccCCccccccccCchH-HcCCCCCchHHHHH---HHHHHHHHHhCCCCCCCC---CHHHHH
Confidence            56799999999974           7899999998 43455678899999   888888888887664321   111111


Q ss_pred             hhhHHhhhC---CCee---eecccccc--cccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCE---GNVQ---ELMDPVLK--ESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~---~~~~---~~~d~~l~--~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........   ....   .+......  ....     .+....+.++...|++.+|.+||++.|+++
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            111111100   0000   00000000  0000     011235677888999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.14  E-value=1.7e-11  Score=95.71  Aligned_cols=105  Identities=11%  Similarity=0.005  Sum_probs=65.3

Q ss_pred             ccceeeeeEeecC---------------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCC
Q 041157            3 AKQKVLQFLRSGE---------------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGE   64 (169)
Q Consensus         3 ~~~Ki~dFgls~~---------------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~   64 (169)
                      +.+||+|||+++.               ||.+|+|||...+  ....+.++|+|+   +|+.+++.+| |..+....   
T Consensus       160 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwS---lG~il~ellt~g~~pf~~~---  233 (432)
T 3p23_A          160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFS---AGCVFYYVISEGSHPFGKS---  233 (432)
T ss_dssp             CCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHH---HHHHHHHHHTTSCBTTBST---
T ss_pred             eeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHH---HHHHHHHHHcCCCCCcchh---
Confidence            4678999999864               7999999998332  334566899999   8888888888 55443211   


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                          ...... ............+      ....-..+..+...|++.+|.+||++.+|+
T Consensus       234 ----~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl  282 (432)
T 3p23_A          234 ----LQRQAN-ILLGACSLDCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVL  282 (432)
T ss_dssp             ----TTHHHH-HHTTCCCCTTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             ----hHHHHH-HHhccCCccccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence                000111 1111100011111      111223456788899999999999999997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.14  E-value=1.5e-12  Score=96.82  Aligned_cols=118  Identities=12%  Similarity=0.022  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.+||..+.......   ..
T Consensus       138 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~~---~~  211 (311)
T 4agu_A          138 HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWA---IGCVFAELLSGVPLWPGKSDV---DQ  211 (311)
T ss_dssp             TSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHH---HHHHHHHHHHSSCSCCCSSHH---HH
T ss_pred             CCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHH---HHHHHHHHHhCCCCCCCCCHH---HH
Confidence            56789999998864            6788999998444455688999999   888899999987765321111   11


Q ss_pred             hhhhHHh-----------hhCCCe---eeeccccccccc---cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKL-----------WCEGNV---QELMDPVLKESF---ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~-----------~~~~~~---~~~~d~~l~~~~---~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......           +.....   ..+-++.-....   ..+....+.++...|++.+|.+||++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          212 LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            1111111           000000   001111000000   0011234678889999999999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.14  E-value=1.1e-11  Score=97.07  Aligned_cols=107  Identities=13%  Similarity=0.025  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||.+|+|||. +.....+.++|+|+   +|+.+++.++|..+....   .   .
T Consensus       149 ~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~-l~~~~~~~~~DIwS---lGvilyell~G~~Pf~~~---~---~  218 (444)
T 3soa_A          149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDLWA---CGVILYILLVGYPPFWDE---D---Q  218 (444)
T ss_dssp             TCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSCCCS---S---H
T ss_pred             CCcEEEccCceeEEecCCCceeecccCCcccCCHHH-hcCCCCCCccccHH---HHHHHHHHHhCCCCCCCc---c---H
Confidence            35689999999964            7899999998 44445678899999   888888999988764321   1   1


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . ........+.. ..-.+.. ...+    ..+..+...|++.+|.+||++.|+++
T Consensus       219 ~-~~~~~i~~~~~-~~~~~~~-~~~s----~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          219 H-RLYQQIKAGAY-DFPSPEW-DTVT----PEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             H-HHHHHHHHTCC-CCCTTTT-TTSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H-HHHHHHHhCCC-CCCcccc-ccCC----HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1 11111111111 1111111 1112    24567788999999999999999976

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.14  E-value=7.4e-12  Score=100.91  Aligned_cols=106  Identities=9%  Similarity=-0.121  Sum_probs=69.4

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ...||+|||+|+.           ||..|||||. +.....+.++|+||   +|+.+.+.++|..+...   .   ....
T Consensus       294 ~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv-~~~~~y~~~~DiWS---lGvilyeml~G~~Pf~~---~---~~~~  363 (573)
T 3uto_A          294 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGYYTDMWS---VGVLSYILLSGLSPFGG---E---NDDE  363 (573)
T ss_dssp             CCEEECCCSSCEECCTTSEEEEECSSGGGCCHHH-HTTCCBCHHHHHHH---HHHHHHHHHHSCCSSCC---S---SHHH
T ss_pred             CCEEEeeccceeEccCCCceeeeEECccccCHHH-hCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCC---c---CHHH
Confidence            5789999999985           8999999998 43445578899999   77778888898876532   1   1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ... ....+..  -+........+    ..+..+...|++.+|.+||+..|+++
T Consensus       364 ~~~-~i~~~~~--~~~~~~~~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          364 TLR-NVKSCDW--NMDDSAFSGIS----EDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHH-HHHTTCC--CCCSGGGTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHH-HHHhCCC--CCCcccccCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111 1111110  01111111112    23456778999999999999999976

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.13  E-value=2.1e-11  Score=89.73  Aligned_cols=105  Identities=10%  Similarity=0.028  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. +. ...+.++|+|+   +|+.+++.++|..+....      ...
T Consensus       163 ~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~-~~-~~~~~~~Di~s---lG~il~~ll~g~~pf~~~------~~~  231 (285)
T 3is5_A          163 HSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FK-RDVTFKCDIWS---AGVVMYFLLTGCLPFTGT------SLE  231 (285)
T ss_dssp             TCCEEECCCCCCCC----------CTTGGGCCHHH-HT-TCCCHHHHHHH---HHHHHHHHHHSSCSSCCS------SHH
T ss_pred             CCCEEEEeeecceecCCcccCcCcccccCcCChHH-hc-cCCCcccCeeh---HHHHHHHHHhCCCCCCCC------CHH
Confidence            35689999999974           7889999998 42 45678999999   888899999988775321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............. ..   ....+    ..+..+...|++.+|.+||++.||++
T Consensus       232 ~~~~~~~~~~~~~~-~~---~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          232 EVQQKATYKEPNYA-VE---CRPLT----PQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHCCCCCC-C-----CCCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHhhhccCCcccc-cc---cCcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11111111000000 00   00111    24567888999999999999999975

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.13  E-value=3.7e-12  Score=93.24  Aligned_cols=101  Identities=12%  Similarity=0.063  Sum_probs=54.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.++|..+........    
T Consensus       148 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~~~----  219 (278)
T 3cok_A          148 NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI-ATRSAHGLESDVWS---LGCMFYTLLIGRPPFDTDTVKN----  219 (278)
T ss_dssp             TCCEEECCCTTCEECC-----------------------------CTHHHH---HHHHHHHHHHSSCSSCCCSCC-----
T ss_pred             CCCEEEEeecceeeccCCCCcceeccCCCCcCCcch-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCCChhHHH----
Confidence            56799999998764            6889999998 43445677899999   8888889999887653211110    


Q ss_pred             hhhhHHhhhCCCeeeec--cccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELM--DPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                            .     ...+.  +..+....+    ..+.++...|++.+|.+||++.++++
T Consensus       220 ------~-----~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          220 ------T-----LNKVVLADYEMPSFLS----IEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ---------------CCSSCCCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ------H-----HHHHhhcccCCccccC----HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                  0     00111  111111112    24567888999999999999999875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.13  E-value=9.8e-13  Score=98.87  Aligned_cols=118  Identities=13%  Similarity=0.063  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.++|..+......   ...
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~---~~~  233 (331)
T 4aaa_A          160 SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA---IGCLVTEMFMGEPLFPGDSD---IDQ  233 (331)
T ss_dssp             TSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHH---HHHHHHHHHHSSCSCCCSSH---HHH
T ss_pred             CCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHH---HHHHHHHHHhCCCCCCCCCc---HHH
Confidence            56799999998864            7889999998444445678999999   88889999999865432110   011


Q ss_pred             hhhhH-----------HhhhCCC-eeeecccccccccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTW-----------KLWCEGN-VQELMDPVLKESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~-----------~~~~~~~-~~~~~d~~l~~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....           ..+.... ......+.+.....     ......+.++...|++.+|.+||++.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11110           0000000 00001111110000     112245778889999999999999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.13  E-value=8.6e-12  Score=93.28  Aligned_cols=114  Identities=9%  Similarity=-0.058  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.+||..+......   ...
T Consensus       144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~~~---~~~  217 (317)
T 2pmi_A          144 RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS---CGCILAEMITGKPLFPGTND---EEQ  217 (317)
T ss_dssp             TCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHH---HHHHHHHHHHSSCSCCCSSH---HHH
T ss_pred             CCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCCh---HHH
Confidence            56799999999863            6889999998443445678999999   88889999999866432111   011


Q ss_pred             hhhhHHhhhCC------------------------CeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEG------------------------NVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~------------------------~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........                        .+.+.+.+......+    ..+..+...|++.+|.+||++.++++
T Consensus       218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          218 LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD----GNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC----HHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            11111100000                        000011111111111    34678888999999999999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.13  E-value=1.5e-12  Score=99.36  Aligned_cols=108  Identities=11%  Similarity=0.002  Sum_probs=64.7

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||+++.           ||..|+|||...+......++|+|+   +|+.+++.++|+.+........  .....
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~~~~~--~~~~~  230 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWS---CGVTLYVMLVGAYPFEDPEEPR--DYRKT  230 (361)
T ss_dssp             CEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHH---HHHHHHHHHHSSCSCC----CC--CHHHH
T ss_pred             eEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeeh---hHHHHHHHHhCCCCCCCCccHH--HHHHH
Confidence            489999999874           8999999998443333345589999   8888999999988754321111  11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...... ... .. ...  ...+    ..+..+...|++.+|.+||++.++++
T Consensus       231 ~~~~~~-~~~-~~-~~~--~~~s----~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          231 IQRILS-VKY-SI-PDD--IRIS----PECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHT-TCC-CC-CTT--SCCC----HHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHhc-CCC-CC-CCc--CCCC----HHHHHHHHHHccCChhHCcCHHHHHh
Confidence            111111 100 00 000  0111    34567888999999999999999975

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.13  E-value=8.5e-12  Score=95.63  Aligned_cols=54  Identities=9%  Similarity=-0.082  Sum_probs=44.5

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.         ||..|+|||. +.....+.++|+|+   ||+.+++.+||+.+..
T Consensus       197 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~DiwS---lG~il~elltg~~pf~  259 (382)
T 2vx3_A          197 RSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEV-LLGMPYDLAIDMWS---LGCILVEMHTGEPLFS  259 (382)
T ss_dssp             SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSSC
T ss_pred             CCcEEEEeccCceecccccccccCCccccChHH-HcCCCCCcHHHHHH---HHHHHHHHHhCCCCCC
Confidence            45789999999864         7899999998 43445678999999   8888999999987653

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.13  E-value=1.3e-12  Score=97.66  Aligned_cols=102  Identities=11%  Similarity=-0.032  Sum_probs=65.7

Q ss_pred             cccceeeeeEeecC------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCC
Q 041157            2 NAKQKVLQFLRSGE------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFS   57 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~   57 (169)
                      +..+||+|||+++.                        ||..|+|||. ......+.++|+|+   +|+.+++.+++..+
T Consensus       200 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~~~~~  275 (332)
T 3qd2_B          200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQ-IHGNNYSHKVDIFS---LGLILFELLYSFST  275 (332)
T ss_dssp             TCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHH-HHCCCCCTHHHHHH---HHHHHHHHHSCCCC
T ss_pred             CCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHH-hcCCCCcchhhHHH---HHHHHHHHHHcCCC
Confidence            56799999998763                        7889999998 44455678999999   88788888875432


Q ss_pred             CCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           58 NENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        58 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..         -...........        ... .........+..+...|++.+|.+||++.++++
T Consensus       276 ~~---------~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          276 QM---------ERVRIITDVRNL--------KFP-LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HH---------HHHHHHHHHHTT--------CCC-HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hh---------HHHHHHHHhhcc--------CCC-cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            10         000011111111        110 011122234567888999999999999999986

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.13  E-value=6.2e-12  Score=94.50  Aligned_cols=105  Identities=10%  Similarity=-0.090  Sum_probs=68.7

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+....      .....
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~------~~~~~  225 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWS---IGVITYILLSGASPFLGD------TKQET  225 (326)
T ss_dssp             CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSCCSSCCS------SHHHH
T ss_pred             CEEEEECCCCeECCCCCccccccCCcCcCCcee-ecCCCCCcHHHHHH---HHHHHHHHHHCcCCCCCC------CHHHH
Confidence            689999998864           7899999998 44555678899999   888888999998765321      01111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. ....... . .........    ...+..+...|++.+|.+||++.++++
T Consensus       226 ~~-~~~~~~~-~-~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          226 LA-NVSAVNY-E-FEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HH-HHHHTCC-C-CCHHHHTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HH-HHHhcCC-C-cCccccccC----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11 1111100 0 000000111    134567888999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.13  E-value=1.9e-11  Score=90.61  Aligned_cols=111  Identities=14%  Similarity=0.039  Sum_probs=73.0

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          |+..|+|||. ......+.++|+|+   +|+.+++.++|..+.....      .. 
T Consensus       145 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~------~~-  213 (304)
T 2jam_A          145 NSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEV-LAQKPYSKAVDCWS---IGVITYILLCGYPPFYEET------ES-  213 (304)
T ss_dssp             TCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTT-BSSCSCCHHHHHHH---HHHHHHHHHHSSCTTTTSC------HH-
T ss_pred             CCCEEEccCCcceecCCCccccccCCCCccChHH-hccCCCCchhhHHH---HHHHHHHHHHCCCCCCCCC------HH-
Confidence            46789999998874          7899999998 44555678999999   8888889999887643211      11 


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      ........+.. . .........+    ..+.++...|++.+|.+||++.++++  .+++
T Consensus       214 ~~~~~i~~~~~-~-~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          214 KLFEKIKEGYY-E-FESPFWDDIS----ESAKDFICHLLEKDPNERYTCEKALSHPWIDG  267 (304)
T ss_dssp             HHHHHHHHCCC-C-CCTTTTTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHHHHcCCC-C-CCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence            11111111111 0 0111111112    34667888999999999999999986  4554

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.12  E-value=3.6e-12  Score=95.78  Aligned_cols=117  Identities=8%  Similarity=-0.055  Sum_probs=68.9

Q ss_pred             ccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            3 AKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         3 ~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      ..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.++|..+.....   .....
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~---~~~~~  247 (329)
T 3gbz_A          174 PVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWS---IACIWAEMLMKTPLFPGDS---EIDQL  247 (329)
T ss_dssp             CEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHH---HHHHHHHHHHSSCSSCCSS---HHHHH
T ss_pred             ceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHH---HHHHHHHHHHCCCCcCCCC---HHHHH
Confidence            4589999998863            6899999998444445688999999   8888889999886643211   00111


Q ss_pred             hhhHHhhhC----------------CCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCE----------------GNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~----------------~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........                ....+.....+........-..+..+...|++.+|.+||++.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            111100000                0000000000000000001134677888999999999999999976

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.12  E-value=4.7e-12  Score=98.38  Aligned_cols=117  Identities=13%  Similarity=0.021  Sum_probs=71.2

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||..|+|||+..+....+.++|+|+   ||+.+++.++|+.+....   .......
T Consensus       194 ~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS---lG~il~ell~G~~pf~~~---~~~~~l~  267 (420)
T 1j1b_A          194 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS---AGCVLAELLLGQPIFPGD---SGVDQLV  267 (420)
T ss_dssp             TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSSCCS---SHHHHHH
T ss_pred             CeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHH---HHHHHHHHHhCCCCCCCC---CHHHHHH
Confidence            4579999999974           7889999998444446678999999   888899999998654321   1111111


Q ss_pred             hhHHhhh----------CCCeeeecccccccc-----ccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWC----------EGNVQELMDPVLKES-----FILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~----------~~~~~~~~d~~l~~~-----~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....+.          .....+..-+.+...     +.......+.++..+|++.+|.+||++.|+++
T Consensus       268 ~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            1111100          000111111111100     00111235678889999999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.11  E-value=4.8e-12  Score=92.37  Aligned_cols=107  Identities=11%  Similarity=0.064  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              |+..|+|||...+....+.++|+|+   +|+.+++.++|..+........  
T Consensus       141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~~~~--  215 (276)
T 2yex_A          141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS---CGIVLTAMLAGELPWDQPSDSC--  215 (276)
T ss_dssp             TCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHH---HHHHHHHHHHSSCCCSCSCTTS--
T ss_pred             CCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHH---HHHHHHHHHhCCCCCCCCchHH--
Confidence            46789999998752              6888999998433333467899999   8888999999987754321110  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .   ....+.....  ...+  ....+    ..+.++...|++.+|.+||++.++++
T Consensus       216 -~---~~~~~~~~~~--~~~~--~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          216 -Q---EYSDWKEKKT--YLNP--WKKID----SAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             -H---HHHHHHTTCT--TSTT--GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -H---HHHHhhhccc--ccCc--hhhcC----HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence             0   0111111110  0000  01112    24567888999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.11  E-value=3.7e-12  Score=99.59  Aligned_cols=103  Identities=9%  Similarity=-0.015  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||.+|+|||+ +.....+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       285 ~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~------~~  354 (446)
T 4ejn_A          285 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQ------DH  354 (446)
T ss_dssp             SSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHH-HHTSCCCTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCEEEccCCCceeccCCCcccccccCCccccCHhh-cCCCCCCCccchhh---hHHHHHHHhhCCCCCCCC------CH
Confidence            56899999999874            7899999998 44556688999999   888899999998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......... ...      .+....+    ..+..+...|++.+|.+||     +..++++
T Consensus       355 ~~~~~~i~~-~~~------~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          355 EKLFELILM-EEI------RFPRTLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHH-CCC------CCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHh-CCC------CCCccCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            111111111 110      1111112    2456788899999999999     9999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.11  E-value=4.3e-12  Score=100.18  Aligned_cols=108  Identities=15%  Similarity=0.080  Sum_probs=71.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.++|..+....      ...
T Consensus       152 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS---lGvil~elltG~~Pf~~~------~~~  222 (476)
T 2y94_A          152 HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS---SGVILYALLCGTLPFDDD------HVP  222 (476)
T ss_dssp             TCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHH---HHHHHHHHHHSSCSSCCS------SSH
T ss_pred             CCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehh---hHHHHHHHhhCCCCCCCC------CHH
Confidence            56899999999874           7899999998444444568899999   888888999988765321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      ... .....+..      ......+    ..+..+...|++.+|.+||++.++++  .+..
T Consensus       223 ~~~-~~i~~~~~------~~p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          223 TLF-KKICDGIF------YTPQYLN----PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHH-HHHHTTCC------CCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HHH-HHHhcCCc------CCCccCC----HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            111 11111110      0011111    23567888999999999999999986  4444

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.11  E-value=1.6e-11  Score=89.61  Aligned_cols=104  Identities=14%  Similarity=0.082  Sum_probs=65.1

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||...+....+.++|+|+   +|+.+++.++|..+....      ...
T Consensus       147 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~------~~~  217 (276)
T 2h6d_A          147 HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS---CGVILYALLCGTLPFDDE------HVP  217 (276)
T ss_dssp             TSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHH---HHHHHHHHHHSSCSSCCS------SHH
T ss_pred             CCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHH---HHHHHHHHHhCCCCCCCC------cHH
Confidence            56789999998875           6789999998433333467899999   888889999988764321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ........+..      .+....+    ..+..+...|++.+|.+||++.++++
T Consensus       218 -~~~~~~~~~~~------~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          218 -TLFKKIRGGVF------YIPEYLN----RSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             -HHHHHHHHCCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -HHHHHhhcCcc------cCchhcC----HHHHHHHHHHccCChhhCCCHHHHHh
Confidence             11111111110      0111112    24567888999999999999999987

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.11  E-value=2.8e-11  Score=91.85  Aligned_cols=54  Identities=15%  Similarity=0.109  Sum_probs=45.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +.++||+|||+++.          ||..|+|||. ......+.++|+|+   +|+.+++.+||..+..
T Consensus       168 ~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          168 RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER-LQGTHYSVQSDIWS---MGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             TCCEEECCCCCCHHHHHHC----CCCCTTCCHHH-HTTCCCSHHHHHHH---HHHHHHHHHHTSCCSS
T ss_pred             CCCEEEEECCCCcccccccccCCCCCCCeECHHH-HcCCCCCchhhHHH---HHHHHHHHHhCCCCCC
Confidence            56799999999863          8999999998 44556678999999   8888999999987753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.11  E-value=2.5e-12  Score=96.35  Aligned_cols=54  Identities=13%  Similarity=-0.087  Sum_probs=44.0

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.         ||..|+|||. ......+.++|+|+   +|+.+++.++|..+..
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~pf~  235 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEV-ILALGWSQPCDVWS---IGCILIEYYLGFTVFP  235 (339)
T ss_dssp             CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHH-HTTSCCCTHHHHHH---HHHHHHHHHHSSCSCC
T ss_pred             CCCceEeeCcccccCccccccccCCccccChHH-hhCCCCCcchhhHH---HHHHHHHHHhCCCCCC
Confidence            45689999999874         7899999998 43455678999999   8888889999976643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=4.4e-12  Score=96.40  Aligned_cols=109  Identities=12%  Similarity=-0.007  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +.++||+|||+++.             ||..|+|||+..+ ....+.++|+|+   ||+.+++.+||..+........  
T Consensus       195 ~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dvws---lG~il~ell~g~~pf~~~~~~~--  269 (355)
T 1vzo_A          195 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS---LGVLMYELLTGASPFTVDGEKN--  269 (355)
T ss_dssp             TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHH---HHHHHHHHHHSSCTTSCTTSCC--
T ss_pred             CCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHH---HHHHHHHHHHCCCCCccCCccc--
Confidence            56899999999873             7999999998332 234568899999   8888999999987754221111  


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVVM  126 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~~  126 (169)
                      ............       .+....    +....+..+...|++.+|.+||     ++.++++.
T Consensus       270 ~~~~~~~~~~~~-------~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          270 SQAEISRRILKS-------EPPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             CHHHHHHHHHHC-------CCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             hHHHHHHHHhcc-------CCCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            111111111110       011111    1123456788899999999999     88888763

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.10  E-value=3.7e-12  Score=95.37  Aligned_cols=98  Identities=14%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          ||..|+|||...+....+.++|+|+   ||+.+++.+||..+....          
T Consensus       186 ~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~----------  252 (320)
T 3a99_A          186 RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS---LGILLYDMVCGDIPFEHD----------  252 (320)
T ss_dssp             TTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHH---HHHHHHHHHHSSCSCCSH----------
T ss_pred             CCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHh---HHHHHHHHHHCCCCCCCh----------
Confidence            46799999998874          7889999998333333467889999   888899999988764321          


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ..... +..  ...    ...+    ..+..+...|++.+|.+||++.++++
T Consensus       253 --~~~~~-~~~--~~~----~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          253 --EEIIR-GQV--FFR----QRVS----SECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             --HHHHH-CCC--CCS----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --hhhhc-ccc--ccc----ccCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence              00111 110  011    1122    24667888999999999999999986

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.10  E-value=1.6e-12  Score=97.59  Aligned_cols=107  Identities=11%  Similarity=-0.036  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.....      ..
T Consensus       170 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~~------~~  239 (327)
T 3lm5_A          170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI-LNYDPITTATDMWN---IGIIAYMLLTHTSPFVGED------NQ  239 (327)
T ss_dssp             BCCEEECCGGGCEEC---------CCCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSSCCSS------HH
T ss_pred             CCcEEEeeCccccccCCccccccccCCcCccCCee-ecCCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC------ch
Confidence            46789999999874           7899999998 44556678999999   8888999999987653211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... ....... ....+.     .......+..+...|++.+|.+||++.++++
T Consensus       240 ~~~~-~i~~~~~-~~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          240 ETYL-NISQVNV-DYSEET-----FSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHH-HHHHTCC-CCCTTT-----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHH-HHHhccc-ccCchh-----hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            1111 1111100 011111     0111234667888999999999999999976

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.10  E-value=2.3e-12  Score=97.12  Aligned_cols=54  Identities=9%  Similarity=-0.143  Sum_probs=44.6

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.         ||..|+|||. +.....+.++|+|+   +|+.+++.+||..+..
T Consensus       178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~el~~g~~pf~  240 (355)
T 2eu9_A          178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEV-ILELGWAQPCDVWS---IGCILFEYYRGFTLFQ  240 (355)
T ss_dssp             CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSCC
T ss_pred             CCcEEEeecCccccccccccCCcCCCcccCCee-eecCCCCCccchHH---HHHHHHHHHhCCCCCC
Confidence            46789999999874         7899999998 43455678899999   8888899999887653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.10  E-value=6e-12  Score=96.51  Aligned_cols=118  Identities=8%  Similarity=-0.063  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.++|..+....   ......
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~---~~~~~~  251 (383)
T 3eb0_A          178 DNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWS---IGCVFGELILGKPLFSGE---TSIDQL  251 (383)
T ss_dssp             TTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSSCCS---SHHHHH
T ss_pred             CCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhh---HHHHHHHHHhCCCCCCCC---ChHHHH
Confidence            46799999999974           7888999998444455788999999   888889999988664321   110111


Q ss_pred             hhhHHhhhC----------CCeeeeccccccc-----cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCE----------GNVQELMDPVLKE-----SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~----------~~~~~~~d~~l~~-----~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........          ....+..-+.+..     ..+......+..+...|++.+|.+||++.|+++
T Consensus       252 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          252 VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111110000          0000110011100     011112234678888999999999999999973

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.10  E-value=3.5e-12  Score=94.15  Aligned_cols=118  Identities=8%  Similarity=-0.037  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.+|++.+....  ......
T Consensus       137 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~~~~p~~~~--~~~~~~  211 (292)
T 3o0g_A          137 NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS---AGCIFAELANAGRPLFPG--NDVDDQ  211 (292)
T ss_dssp             TSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHH---HHHHHHHHTTTSCCSCCC--SSHHHH
T ss_pred             CCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHH---HHHHHHHHHHcCCCCcCC--CCHHHH
Confidence            56899999999863            6888999998444444688999999   888888999888764221  110011


Q ss_pred             hhhhHHhhhC---CC---eeeecc----------ccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCE---GN---VQELMD----------PVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~---~~---~~~~~d----------~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........   ..   ..+..+          ..+. ......-..+.++...|++.+|.+||++.|+++
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV-NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT-TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhCCCChhhhhhhcccccccccccccCCcchh-hcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            1111111100   00   000000          0000 000111234567888999999999999999876

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.10  E-value=3.6e-12  Score=96.04  Aligned_cols=107  Identities=8%  Similarity=-0.114  Sum_probs=69.4

Q ss_pred             ccceeeeeEeecC----------------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            3 AKQKVLQFLRSGE----------------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         3 ~~~Ki~dFgls~~----------------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +.+||+|||+++.                ||..|+|||.... ....+.++|+|+   ||+.+++.++|..+....    
T Consensus       207 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~----  279 (345)
T 3hko_A          207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS---AGVLLHLLLMGAVPFPGV----  279 (345)
T ss_dssp             CCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH---HHHHHHHHHHSSCSSCCS----
T ss_pred             ceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH---HHHHHHHHHHCCCCCCCC----
Confidence            4799999998862                7889999998322 245567999999   888899999998775321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ..............  ....+.. ...    ...+.++...|++.+|.+||++.++++
T Consensus       280 --~~~~~~~~~~~~~~--~~~~~~~-~~~----~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          280 --NDADTISQVLNKKL--CFENPNY-NVL----SPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             --SHHHHHHHHHHCCC--CTTSGGG-GGS----CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             --ChHHHHHHHHhccc--ccCCccc-ccC----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              11111111111110  0111111 111    134667888999999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.09  E-value=4.2e-11  Score=89.09  Aligned_cols=108  Identities=17%  Similarity=0.111  Sum_probs=66.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+++.           |+..|+|||...    .....+.++|+|+   ||+.+++.++|..+.....    
T Consensus       161 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~----  233 (318)
T 2dyl_A          161 RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS---LGISLVELATGQFPYKNCK----  233 (318)
T ss_dssp             TSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHH---HHHHHHHHHHSSCTTTTCC----
T ss_pred             CCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhh---HHHHHHHHHhCCCCCCCCC----
Confidence            56899999998864           789999999832    2344567899999   8888999999887653211    


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ..............  ..+..  ....+    ..+..+...|++.+|.+||++.++++
T Consensus       234 -~~~~~~~~~~~~~~--~~~~~--~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          234 -TDFEVLTKVLQEEP--PLLPG--HMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             -SHHHHHHHHHHSCC--CCCCS--SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -ccHHHHHHHhccCC--CCCCc--cCCCC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence             01111111111110  00000  00112    24567888999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.09  E-value=1.1e-11  Score=92.56  Aligned_cols=116  Identities=11%  Similarity=-0.032  Sum_probs=70.3

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.+||..+.....   .....
T Consensus       156 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~---~~~~~  228 (326)
T 1blx_A          156 SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV-LLQSSYATPVDLWS---VGCIFAEMFRRKPLFRGSS---DVDQL  228 (326)
T ss_dssp             TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHHH
T ss_pred             CCCEEEecCcccccccCCCCccccccccceeCHHH-HhcCCCCcchhHHH---HHHHHHHHHcCCCCCCCCC---HHHHH
Confidence            46789999999874           7889999998 43455678899999   8888889999887643211   00111


Q ss_pred             hhhHHhhhCCC---e-------eeecc----ccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGN---V-------QELMD----PVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~---~-------~~~~d----~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........   .       .....    ..+ ..........+..+...|++.+|.+||++.++++
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI-EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCG-GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHcCCCCcccCccccccchhhhcccCcchh-hhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11111100000   0       00000    000 0000111234567888999999999999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=2.5e-12  Score=96.51  Aligned_cols=107  Identities=6%  Similarity=-0.092  Sum_probs=70.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.....      ..
T Consensus       140 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~~------~~  209 (321)
T 1tki_A          140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVSTATDMWS---LGTLVYVLLSGINPFLAET------NQ  209 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHH-HTTCEECHHHHHHH---HHHHHHHHHHSSCTTCCSS------HH
T ss_pred             CCCEEEEECCCCeECCCCCccccccCChhhcCcHH-hcCCCCCchhhHHH---HHHHHHHHHhCCCCCcCCC------HH
Confidence            56899999999874           7889999998 43444578999999   8888889999887653211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... .+..  ..+.......    ...+..+...|++.+|.+||++.|+++
T Consensus       210 ~~~~~i~-~~~~--~~~~~~~~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          210 QIIENIM-NAEY--TFDEEAFKEI----SIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHH-HTCC--CCCHHHHTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHH-cCCC--CCChhhhccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1111111 1110  0111000111    234667888999999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.09  E-value=3.9e-11  Score=94.44  Aligned_cols=53  Identities=8%  Similarity=-0.108  Sum_probs=42.8

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +.++||+|||+++.           ||..|+|||... ....+.++|+|+   +|+.+.+.++|+.+.
T Consensus       200 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwS---lG~il~ell~g~~pF  263 (464)
T 3ttj_A          200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWS---VGCIMGEMVRHKILF  263 (464)
T ss_dssp             TSCEEECCCCCC-----CCCC----CCCTTCCHHHHT-TCCCCTTHHHHH---HHHHHHHHHHSSCSS
T ss_pred             CCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHc-CCCCCHHHHHHH---HHHHHHHHHhCCCCC
Confidence            56899999999975           789999999843 445678899999   888888999998764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.08  E-value=2.6e-12  Score=97.23  Aligned_cols=116  Identities=9%  Similarity=-0.079  Sum_probs=70.0

Q ss_pred             cccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.                ||..|+|||...+....+.++|+|+   +|+.+++.+||..+.....   
T Consensus       160 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~---  233 (351)
T 3mi9_A          160 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG---AGCIMAEMWTRSPIMQGNT---  233 (351)
T ss_dssp             TSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---
T ss_pred             CCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHH---HHHHHHHHHhCCCCCCCCC---
Confidence            56899999998853                5788999998444445678999999   8888889999876643211   


Q ss_pred             CcchhhhhHHhhhC-----------CCe---eeeccccccccccHHHH------HHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCE-----------GNV---QELMDPVLKESFILEEI------LKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~-----------~~~---~~~~d~~l~~~~~~~~~------~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..............           ...   .+.....  .......+      ..+..+...|++.+|.+||++.|+++
T Consensus       234 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          234 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSC--CCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHHhCCCChhhccccccchhhccccccccc--ccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            10111111111000           000   0000000  00011111      23677888999999999999999986

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.08  E-value=7.8e-12  Score=93.02  Aligned_cols=98  Identities=9%  Similarity=0.103  Sum_probs=67.7

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          |+..|+|||+..+....+.++|+|+   +|+.+++.++|+.+....          
T Consensus       176 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~----------  242 (312)
T 2iwi_A          176 RGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWS---LGILLYDMVCGDIPFERD----------  242 (312)
T ss_dssp             TTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHH---HHHHHHHHHHSSCSCCSH----------
T ss_pred             CCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHH---HHHHHHHHHHCCCCCCCh----------
Confidence            46789999998874          7889999998333333456899999   888889999988764320          


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ..... ...      .+....+    ..+.++...|++.+|.+||++.++++
T Consensus       243 --~~~~~-~~~------~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          243 --QEILE-AEL------HFPAHVS----PDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             --HHHHH-TCC------CCCTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --HHHhh-hcc------CCcccCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence              00111 000      0111122    24567888999999999999999987

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.08  E-value=3.7e-11  Score=89.47  Aligned_cols=111  Identities=13%  Similarity=0.039  Sum_probs=69.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ||..|+|||. ......+.++|+|+   +|+.+++.+||..+....     
T Consensus       152 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~ll~g~~pf~~~-----  222 (311)
T 3ork_A          152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-ARGDSVDARSDVYS---LGCVLYEVLTGEPPFTGD-----  222 (311)
T ss_dssp             TSCEEECCCSCC------------------CCTTCCHHH-HHTCCCCHHHHHHH---HHHHHHHHHHSSCSCCCS-----
T ss_pred             CCCEEEeeccCcccccccccccccccccCcCcccCCHHH-hcCCCCCchHhHHH---HHHHHHHHHhCCCCCCCC-----
Confidence            56789999999863               7899999998 44556678899999   888899999988765321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH-HHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV-MLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~-~L~~  129 (169)
                       ..............    ..+....   ......+..+...|++.+|.+||+..+++. .|..
T Consensus       223 -~~~~~~~~~~~~~~----~~~~~~~---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          223 -SPVSVAYQHVREDP----IPPSARH---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             -SHHHHHHHHHHCCC----CCHHHHS---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             -ChHHHHHHHhcCCC----CCccccc---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence             11111222221111    0000000   011234667888999999999998877654 4443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.08  E-value=1.9e-12  Score=97.11  Aligned_cols=118  Identities=6%  Similarity=-0.102  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.++|..+.....   ....
T Consensus       136 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~~---~~~~  209 (324)
T 3mtl_A          136 RGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWG---VGCIFYEMATGRPLFPGST---VEEQ  209 (324)
T ss_dssp             TCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHH
T ss_pred             CCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCC---HHHH
Confidence            46799999999874            6889999998444455678999999   8888999999986643211   0011


Q ss_pred             hhhhHHhhhCC---Ceeeecc---------ccccccc----cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEG---NVQELMD---------PVLKESF----ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~---~~~~~~d---------~~l~~~~----~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........   .......         +......    ....-..+..+...|++.+|.+||++.|+++
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          210 LHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            11111111000   0000000         0000000    0011134567888999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.08  E-value=3.8e-11  Score=91.34  Aligned_cols=103  Identities=9%  Similarity=0.009  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||.+|+|||+ +.....+.++|+|+   ||+.+++.+||+.+......    
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~elltg~~pf~~~~~----  290 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM-LSNKPWNYQIDYFG---VAATVYCMLFGTYMKVKNEG----  290 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH-HTTCCBSTHHHHHH---HHHHHHHHHHSSCCCEEEET----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHH-hcCCCCCccccHHH---HHHHHHHHHhCCCccccCCC----
Confidence            57899999999952              8999999998 43445678999999   88889999999987422100    


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCC-CCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADR-PTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~R-P~m~~V~~~L~~  129 (169)
                                  + . ..++..+......+.   +.++...|++.+|.+| |++.++.+.|+.
T Consensus       291 ------------~-~-~~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          291 ------------G-E-CKPEGLFRRLPHLDM---WNEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             ------------T-E-EEECSCCTTCSSHHH---HHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             ------------C-c-eeechhccccCcHHH---HHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence                        0 0 111111211112222   3345567888999888 677777777765

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.08  E-value=1.2e-12  Score=97.15  Aligned_cols=104  Identities=16%  Similarity=0.160  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       155 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~------~~  224 (303)
T 3a7i_A          155 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV-IKQSAYDSKADIWS---LGITAIELARGEPPHSEL------HP  224 (303)
T ss_dssp             TSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CH
T ss_pred             CCCEEEeecccceecCccccccCccCCCcCccCHHH-HhcCCCCchhhhHH---HHHHHHHHccCCCCCCCc------CH
Confidence            56799999998853            6788999998 44455667899999   888899999988764321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... .....+.     .+.+...++    ..+..+...|++.+|.+||++.++++
T Consensus       225 ~~~~-~~~~~~~-----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          225 MKVL-FLIPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HHHH-HHHHHSC-----CCCCCSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHH-HHhhcCC-----CCCCccccC----HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1111 1111111     111222222    24667888999999999999999976

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.08  E-value=1.8e-11  Score=93.33  Aligned_cols=106  Identities=13%  Similarity=-0.007  Sum_probs=68.9

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||.+|+|||. ......+.++|+|+   +|+.+.+.++|..+....   .   ...
T Consensus       168 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~Pf~~~---~---~~~  237 (362)
T 2bdw_A          168 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWA---CGVILYILLVGYPPFWDE---D---QHR  237 (362)
T ss_dssp             CCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSSCCS---S---HHH
T ss_pred             CCEEEeecCcceEecCCcccccCCCCccccCHHH-HccCCCCchhhHHH---HHHHHHHHHHCCCCCCCC---C---HHH
Confidence            4589999999874           7899999998 44445678899999   888888999998764321   1   111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+.. ..-.+.. ...+    ..+..+...|++.+|.+||++.++++
T Consensus       238 -~~~~i~~~~~-~~~~~~~-~~~~----~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          238 -LYAQIKAGAY-DYPSPEW-DTVT----PEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             -HHHHHHHTCC-CCCTTGG-GGSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -HHHHHHhCCC-CCCcccc-cCCC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence             1111111111 0001100 1111    24567888999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.08  E-value=1e-11  Score=95.86  Aligned_cols=55  Identities=5%  Similarity=-0.191  Sum_probs=44.7

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.               ||..|+|||...+....+.++|+|+   +|+.+++.+||..+..
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS---lG~il~ell~g~~pf~  237 (405)
T 3rgf_A          168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA---IGCIFAELLTSEPIFH  237 (405)
T ss_dssp             TTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHH---HHHHHHHHHHSSCTTC
T ss_pred             CCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHH---HHHHHHHHHhCCCCCC
Confidence            46899999999863               6889999998444455788999999   8888999999987653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.07  E-value=3.1e-11  Score=92.19  Aligned_cols=117  Identities=11%  Similarity=-0.000  Sum_probs=70.6

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||...+....+.++|+|+   +|+.+++.+||..+....-   .......
T Consensus       180 ~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~~---~~~~~~~  253 (371)
T 4exu_A          180 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS---VGCIMAEMLTGKTLFKGKD---YLDQLTQ  253 (371)
T ss_dssp             TCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHH---HHHHHHHHHHSSCSCCCSS---HHHHHHH
T ss_pred             CCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHH---HHHHHHHHHhCCCCCCCCC---hHHHHHH
Confidence            56799999999975         7899999998444456788999999   8888999999987653211   0011111


Q ss_pred             hHHhhhCCCeeeec---------------cccccccc---cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELM---------------DPVLKESF---ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~---------------d~~l~~~~---~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... ...+.+               ........   .......+..+...|++.+|.+||++.++++
T Consensus       254 i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          254 ILKVTGV-PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHHHCC-CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHhCC-CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            1000000 000000               00000000   0011235677888999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.07  E-value=1.7e-12  Score=95.03  Aligned_cols=101  Identities=15%  Similarity=0.171  Sum_probs=66.5

Q ss_pred             ccceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhH
Q 041157            3 AKQKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTW   74 (169)
Q Consensus         3 ~~~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~   74 (169)
                      ..+||+|||+++.        ||..|+|||...+....+.++|+|+   ||+.+++..++......     . .    .+
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~~~~~~~~-----~-~----~~  237 (289)
T 1x8b_A          171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFA---LALTVVCAAGAEPLPRN-----G-D----QW  237 (289)
T ss_dssp             CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHH---HHHHHHHHTTCCCCCSS-----S-H----HH
T ss_pred             eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHH---HHHHHHHHhcCCCCCcc-----h-h----HH
Confidence            4689999998875        7899999998443335557899999   77778877776543211     0 0    11


Q ss_pred             HhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           75 KLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        75 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....+..     +.+....+    ..+.++...|++.+|.+||++.++++
T Consensus       238 ~~~~~~~~-----~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          238 HEIRQGRL-----PRIPQVLS----QEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHTTCC-----CCCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHcCCC-----CCCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            12222221     11111122    24667888999999999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.07  E-value=2.1e-11  Score=92.25  Aligned_cols=119  Identities=9%  Similarity=-0.083  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||...+....+.++|+|+   +|+.+++.++|..+...   ......
T Consensus       148 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~~~~~---~~~~~~  221 (346)
T 1ua2_A          148 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA---VGCILAELLLRVPFLPG---DSDLDQ  221 (346)
T ss_dssp             TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHH---HHHHHHHHHHSSCSSCC---SSHHHH
T ss_pred             CCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHh---HHHHHHHHHHCCCCCCC---CCHHHH
Confidence            56799999999874            6888999998444444678899999   88888888887654321   110011


Q ss_pred             hhhhHHhhhC---CCeee---e---cccccccccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 041157           70 VYKTWKLWCE---GNVQE---L---MDPVLKESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVVM  126 (169)
Q Consensus        70 v~~~~~~~~~---~~~~~---~---~d~~l~~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~  126 (169)
                      ..........   ....+   .   +...-....+     ......+.++...|++.+|.+||++.|+++.
T Consensus       222 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1111111100   00000   0   0000000001     1112456778889999999999999999873

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.07  E-value=3.3e-12  Score=98.37  Aligned_cols=106  Identities=8%  Similarity=-0.100  Sum_probs=70.5

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.+||..+....      ....
T Consensus       188 ~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~elltg~~Pf~~~------~~~~  257 (387)
T 1kob_A          188 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDREPVGFYTDMWA---IGVLGYVLLSGLSPFAGE------DDLE  257 (387)
T ss_dssp             CCEEECCCTTCEECCTTSCEEEECSSGGGCCHHH-HTTCCBCHHHHHHH---HHHHHHHHHHSCCSSCCS------SHHH
T ss_pred             CceEEEecccceecCCCcceeeeccCCCccCchh-ccCCCCCCcccEee---HhHHHHHHHhCCCCCCCC------CHHH
Confidence            5689999999874           8899999998 44455678899999   888899999988765321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..... .....  ..++......+    ..+..+...|++.+|.+||++.++++
T Consensus       258 ~~~~i-~~~~~--~~~~~~~~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          258 TLQNV-KRCDW--EFDEDAFSSVS----PEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHHHH-HHCCC--CCCSSTTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHH-HhCCC--CCCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            11111 11110  11111111122    34667888999999999999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.07  E-value=4.2e-12  Score=95.13  Aligned_cols=52  Identities=6%  Similarity=-0.134  Sum_probs=43.4

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      .+||+|||+++.           |+..|+|||...+....+.++|+|+   +|+.+++.++|..+.
T Consensus       169 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws---lG~il~~ll~g~~p~  231 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS---LGCMLASMIFRKEPF  231 (330)
T ss_dssp             EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHH---HHHHHHHHHHTCSSS
T ss_pred             EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHH---HHHHHHHHHhCCCCc
Confidence            789999999973           7788999998444456778999999   888899999998775

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.06  E-value=3.2e-12  Score=94.23  Aligned_cols=107  Identities=17%  Similarity=0.036  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.            |+..|+|||...+. ...+.++|+|+   ||+.+++.++|..+..... .   .
T Consensus       159 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~-~---~  231 (295)
T 2clq_A          159 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWS---LGCTIIEMATGKPPFYELG-E---P  231 (295)
T ss_dssp             TCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHH---HHHHHHHHHHTSCTTGGGS-S---H
T ss_pred             CCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHH---HHHHHHHHHHCCCCccCCC-c---h
Confidence            56789999998863            67899999983322 23578999999   8888999999887643210 0   0


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........      ....+.+....+    ..+..+...|++.+|.+||++.++++
T Consensus       232 ~~~~~~~~~------~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          232 QAAMFKVGM------FKVHPEIPESMS----AEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHH------HCCCCCCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             hHHHHhhcc------ccccccccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            000000000      011112222222    34567888999999999999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.06  E-value=4.4e-11  Score=91.41  Aligned_cols=117  Identities=12%  Similarity=0.009  Sum_probs=66.1

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||...+....+.++|+|+   +|+.+.+.++|+.+....   ........
T Consensus       168 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~---~~~~~l~~  241 (367)
T 2fst_X          168 DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS---VGCIMAELLTGRTLFPGT---DHIDQLKL  241 (367)
T ss_dssp             TCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHH---HHHHHHHHHHSSCSCCCS---SHHHHHHH
T ss_pred             CCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHH---HHHHHHHHHhCCCCCCCC---CHHHHHHH
Confidence            56899999999975         7899999998444456678999999   888899999988654221   11111111


Q ss_pred             hHHhhhCCCeeeeccc-----------ccc--ccccH-----HHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDP-----------VLK--ESFIL-----EEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~-----------~l~--~~~~~-----~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........ ..+.+..           .+.  .....     ..-..+..+...|++.+|.+||++.++++
T Consensus       242 i~~~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          242 ILRLVGTP-GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHHHHCSC-CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhCCC-CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            11111000 0000000           000  00000     01134667888999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.06  E-value=2.4e-11  Score=90.84  Aligned_cols=108  Identities=13%  Similarity=-0.017  Sum_probs=69.9

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCccc--ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSY--NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~--~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      ..+||+|||+++.           ||..|+|||...  .....+.++|+|+   +|+.+++.++|..+........  .+
T Consensus       154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~~~--~~  228 (322)
T 2ycf_A          154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS---LGVILFICLSGYPPFSEHRTQV--SL  228 (322)
T ss_dssp             CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHH---HHHHHHHHHHSSCSSCSTTCSS--CH
T ss_pred             CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHH---HHHHHHHHHhCCCCCcccchHH--HH
Confidence            4589999999874           799999999832  2344567899999   8888889999987653321111  11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..    ....+...  ..+......    ...+.++...|++.+|.+||++.++++
T Consensus       229 ~~----~~~~~~~~--~~~~~~~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          229 KD----QITSGKYN--FIPEVWAEV----SEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HH----HHHHTCCC--CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HH----HHHhCccc--cCchhhhhc----CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            11    11111110  011111111    235677888999999999999999873

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.06  E-value=1.1e-11  Score=93.98  Aligned_cols=108  Identities=11%  Similarity=-0.032  Sum_probs=68.7

Q ss_pred             cceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            4 KQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         4 ~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      .+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.......   .. .
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~~~~---~~-~  229 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAENGLLMTPCYTANFVAPEV-LERQGYDAACDIWS---LGVLLYTMLTGYTPFANGPDD---TP-E  229 (342)
T ss_dssp             GEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHH-HHHHHHHHHHHHHH---HHHHHHHHHHSSCSSCSSTTS---CH-H
T ss_pred             eEEEEECCCcccCcCCCCceeccCCCccccCHHH-hcCCCCCCccCeee---HhHHHHHHhcCCCCCCCCCcC---CH-H
Confidence            489999999874            6889999998 43344567899999   888889999998765421111   11 1


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+.. . +........+    ..+..+...|++.+|.+||++.++++
T Consensus       230 ~~~~~i~~~~~-~-~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          230 EILARIGSGKF-S-LSGGYWNSVS----DTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHCCC-C-CCSTTTTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHccCCc-c-cCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11112222211 0 1100101112    34567788999999999999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.06  E-value=5.5e-11  Score=90.82  Aligned_cols=53  Identities=8%  Similarity=-0.142  Sum_probs=40.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|+.+.
T Consensus       163 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~pf  226 (371)
T 2xrw_A          163 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDIWS---VGCIMGEMIKGGVLF  226 (371)
T ss_dssp             TSCEEECCCCC----------------CTTCCHHH-HTTCCCCTTHHHHH---HHHHHHHHHHSSCSS
T ss_pred             CCCEEEEEeecccccccccccCCceecCCccCHHH-hcCCCCCchHhHHH---HHHHHHHHHhCCCCC
Confidence            56899999999875           7889999998 43445678899999   888899999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.06  E-value=1.8e-11  Score=89.80  Aligned_cols=106  Identities=13%  Similarity=-0.020  Sum_probs=69.1

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||++..           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+.....      ...
T Consensus       145 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~pf~~~~------~~~  214 (284)
T 3kk8_A          145 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWA---CGVILYILLVGYPPFWDED------QHR  214 (284)
T ss_dssp             CCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCCSS------HHH
T ss_pred             CcEEEeeceeeEEcccCccccCCCCCcCCcCchh-hcCCCCCcccchHH---HHHHHHHHHHCCCCCCCCc------hhH
Confidence            3489999998853           7889999998 44455678899999   8888999999987753211      111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+.. ....+.. ...+    ..+..+...|++.+|.+||++.++++
T Consensus       215 -~~~~~~~~~~-~~~~~~~-~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          215 -LYAQIKAGAY-DYPSPEW-DTVT----PEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             -HHHHHHHTCC-CCCTTTT-TTSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -HHHHHHhccc-cCCchhh-cccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence             1111111111 1111110 1112    24567888999999999999999976

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.05  E-value=1.2e-11  Score=91.22  Aligned_cols=106  Identities=15%  Similarity=0.079  Sum_probs=64.7

Q ss_pred             cccceeeeeEeecC--------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhC
Q 041157            2 NAKQKVLQFLRSGE--------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRN   55 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~   55 (169)
                      +..+||+|||+++.                          |+..|+|||...+....+.++|+|+   +|+.+++.++. 
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~p-  227 (303)
T 1zy4_A          152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS---LGIIFFEMIYP-  227 (303)
T ss_dssp             TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHH---HHHHHHHHHSC-
T ss_pred             CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHH---HHHHHHHHHhc-
Confidence            56789999998752                          6788999998433445678999999   77777777762 


Q ss_pred             CCCCCCCCCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           56 FSNENKLGEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        56 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      +...       ...... ........      ..+...........+.++...|++.+|.+||++.++++
T Consensus       228 ~~~~-------~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          228 FSTG-------MERVNI-LKKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             CSSH-------HHHHHH-HHHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCc-------hhHHHH-HHhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            2110       000111 11111111      11111122222345677888999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.05  E-value=6.4e-12  Score=102.39  Aligned_cols=106  Identities=9%  Similarity=-0.077  Sum_probs=68.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.++||+|||+|+.          ||+.|||||...+....+.++|+|+   +|+.+.+.++|..|....-..   ....
T Consensus       328 ~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWS---LGvilYEmLtG~~PF~~~~~~---~~~~  401 (689)
T 3v5w_A          328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS---LGCMLFKLLRGHSPFRQHKTK---DKHE  401 (689)
T ss_dssp             TSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHH---HHHHHHHHHHSSCTTCGGGCC---CHHH
T ss_pred             CCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHH---HHHHHHHHHhCCCCCCCCChH---HHHH
Confidence            57899999999975          9999999998333345578899999   888888999998875321111   1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVV  124 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~  124 (169)
                      ....... ..      ..+....+    ..+..+...|++.+|.+|++     ..||.
T Consensus       402 i~~~i~~-~~------~~~p~~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          402 IDRMTLT-MA------VELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHH-CC------CCCCTTSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHhhcC-CC------CCCCccCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            0111111 00      11111122    23556778999999999998     46664

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.05  E-value=1.1e-11  Score=94.52  Aligned_cols=108  Identities=15%  Similarity=0.052  Sum_probs=68.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc-----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN-----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~-----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.           ||..|+|||+..+     ....+.++|+|+   ||+.+++.+||..+....   .
T Consensus       236 ~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~s---lG~il~ell~g~~pf~~~---~  309 (365)
T 2y7j_A          236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA---CGVILFTLLAGSPPFWHR---R  309 (365)
T ss_dssp             TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHH---HHHHHHHHHHSSCSSCCS---S
T ss_pred             CCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHh---HHHHHHHHHHCCCCCCCC---C
Confidence            56899999998763           7899999998322     123567899999   888899999998765321   0


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         ... .......+.. ....+.. ...    ...+..+...|++.+|.+||++.++++
T Consensus       310 ---~~~-~~~~i~~~~~-~~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          310 ---QIL-MLRMIMEGQY-QFSSPEW-DDR----SSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             ---HHH-HHHHHHHTCC-CCCHHHH-SSS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---HHH-HHHHHHhCCC-CCCCccc-ccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               011 1111111110 0000000 011    134667888999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.04  E-value=6.6e-11  Score=90.36  Aligned_cols=117  Identities=11%  Similarity=0.020  Sum_probs=71.3

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||...+....+.++|+|+   +|+.+.+.++|+.+....   ........
T Consensus       164 ~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~---~~~~~l~~  237 (367)
T 1cm8_A          164 DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS---VGCIMAEMITGKTLFKGS---DHLDQLKE  237 (367)
T ss_dssp             TCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHH---HHHHHHHHHHSSCSSCCS---SHHHHHHH
T ss_pred             CCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHH---HHHHHHHHHhCCCCCCCC---CHHHHHHH
Confidence            56899999999875         7889999998444456788999999   888899999988664321   10011111


Q ss_pred             hHHhhhCCC------------------eeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGN------------------VQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~------------------~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........                  +.+.-...+.. .....-..+..+...|++.+|.+||++.++++
T Consensus       238 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          238 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHH-HCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            110000000                  00000000000 00111234667888999999999999999987

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.04  E-value=4e-11  Score=88.61  Aligned_cols=107  Identities=12%  Similarity=0.118  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||++..            |+..|+|||...    .....+.++|+|+   ||+.+++.++|..+....    
T Consensus       153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~----  225 (302)
T 2j7t_A          153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS---LGITLIEMAQIEPPHHEL----  225 (302)
T ss_dssp             TSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHH---HHHHHHHHHHSSCTTTTS----
T ss_pred             CCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHH---HHHHHHHHhcCCCCCccC----
Confidence            56789999998742            789999999832    2344567899999   888888999988765321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ........... +.......   ...++    ..+..+...|++.+|.+||++.++++
T Consensus       226 --~~~~~~~~~~~-~~~~~~~~---~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          226 --NPMRVLLKIAK-SDPPTLLT---PSKWS----VEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             --CHHHHHHHHHH-SCCCCCSS---GGGSC----HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             --CHHHHHHHHhc-cCCcccCC---ccccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence              11111111111 11111111   11112    34667888999999999999999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.04  E-value=4.6e-12  Score=94.35  Aligned_cols=113  Identities=12%  Similarity=-0.056  Sum_probs=67.9

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCC
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNEN   60 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~   60 (169)
                      .+||+|||+++.                   ||..|+|||....    ....+.++|+|+   +|+.+.+.++|..+...
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~  228 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS---LGVILYILLSGYPPFVG  228 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHH---HHHHHHHHHHSSCSCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHh---HHHHHHHHHHCCCCCcc
Confidence            389999998753                   7889999998322    134567899999   88889999999876543


Q ss_pred             CCCCCCcch--------hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           61 KLGEGGFGP--------VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        61 ~~~~~~~~l--------v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .........        ..........+.. ..-+.. ..    .....+.++...|++.+|.+||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          229 RCGSDCGWDRGEACPACQNMLFESIQEGKY-EFPDKD-WA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CCCSCSCC----CCHHHHHHHHHHHHHCCC-CCCHHH-HT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cccccccccccccchhHHHHHHHHHhccCc-ccCchh-cc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            221110000        0000011111110 000000 00    11234677888999999999999999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.04  E-value=5.8e-11  Score=88.29  Aligned_cols=106  Identities=13%  Similarity=0.120  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            |+..|+|||. ......+.++|+|+   +|+.+++.++|..+....      ..
T Consensus       161 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~------~~  230 (314)
T 3com_A          161 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV-IQEIGYNCVADIWS---LGITAIEMAEGKPPYADI------HP  230 (314)
T ss_dssp             TCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHH-HSSSCBCTTHHHHH---HHHHHHHHHHSSCTTTTS------CH
T ss_pred             CCCEEEeecccchhhhhhccccCccCCCCCccChhh-cCCCCCCccccHHH---HHHHHHHHHhCCCCCCCC------Ch
Confidence            46789999998853            6788999998 44445678899999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... ..........+   ..++    ..+..+...|++.+|.+||++.++++
T Consensus       231 ~~~~~~~-~~~~~~~~~~~---~~~~----~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          231 MRAIFMI-PTNPPPTFRKP---ELWS----DNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHH-HHSCCCCCSSG---GGSC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHH-hcCCCcccCCc---ccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            1111111 11110001011   1111    34667888999999999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.04  E-value=3.4e-11  Score=92.37  Aligned_cols=54  Identities=11%  Similarity=-0.137  Sum_probs=44.1

Q ss_pred             cccceeeeeEeec---------------------------------CCCCCCCCCCcccccccCCccccCCCCCCcCHHH
Q 041157            2 NAKQKVLQFLRSG---------------------------------EGRTGDDDEGYSYNILRGNKKVESQELPLFPLDL   48 (169)
Q Consensus         2 ~~~~Ki~dFgls~---------------------------------~gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~l   48 (169)
                      +..+||+|||+++                                 .||..|+|||...+....+.++|+|+   +|+.+
T Consensus       145 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS---lG~il  221 (388)
T 3oz6_A          145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWS---LGCIL  221 (388)
T ss_dssp             TCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHH---HHHHH
T ss_pred             CCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHH---HHHHH
Confidence            5679999999985                                 27888999998444456788999999   88888


Q ss_pred             HHHHHhCCCC
Q 041157           49 IHEATRNFSN   58 (169)
Q Consensus        49 l~~~t~~~~~   58 (169)
                      .+.++|+.+.
T Consensus       222 ~ell~g~~pf  231 (388)
T 3oz6_A          222 GEILCGKPIF  231 (388)
T ss_dssp             HHHHHSSCSC
T ss_pred             HHHHhCCCCC
Confidence            8999987654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.04  E-value=1.4e-11  Score=96.01  Aligned_cols=50  Identities=14%  Similarity=-0.174  Sum_probs=41.8

Q ss_pred             ceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            5 QKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         5 ~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +||+|||+++.         ||..|+|||. +.....+.++|+|+   ||+.+++.+||..+.
T Consensus       241 vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~elltG~~pf  299 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQRVYTYIQSRFYRAPEV-ILGARYGMPIDMWS---LGCILAELLTGYPLL  299 (429)
T ss_dssp             EEECCCTTCEETTCCCCSSCSCGGGCCHHH-HHTBCCCTHHHHHH---HHHHHHHHHHSSCSS
T ss_pred             eEEeecccceecCCcccccCCCCCccChHH-HhCCCCCchHHHHh---HHHHHHHHHhCCCCC
Confidence            89999999864         7889999998 43455678999999   888899999987654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.03  E-value=2.8e-11  Score=92.13  Aligned_cols=118  Identities=9%  Similarity=-0.033  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ||..|+|||...+....+.++|+|+   +|+.+++.++|..+.....   .
T Consensus       164 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~---~  237 (364)
T 3qyz_A          164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS---VGCILAEMLSNRPIFPGKH---Y  237 (364)
T ss_dssp             TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHH---HHHHHHHHHHSSCSSCCSS---G
T ss_pred             CCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHH---HHHHHHHHHHCCCCCCCCC---h
Confidence            56799999998863               6888999997444455678999999   8888999999886653211   1


Q ss_pred             cchhhhhHHhhhCCCe---eeeccc-------cc--ccccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCEGNV---QELMDP-------VL--KESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~---~~~~d~-------~l--~~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ................   ..+.+.       .+  ....+     ...-..+..+...|++.+|.+||++.++++
T Consensus       238 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             GGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1111111111100000   000000       00  00000     011134678888999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.03  E-value=1.8e-11  Score=90.32  Aligned_cols=103  Identities=11%  Similarity=-0.013  Sum_probs=69.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.+||..+....      ..
T Consensus       151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~------~~  220 (294)
T 2rku_A          151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDVWS---IGCIMYTLLVGKPPFETS------CL  220 (294)
T ss_dssp             TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHH-HTTSCBCTHHHHHH---HHHHHHHHHHSSCTTCCS------SH
T ss_pred             CCCEEEEeccCceecccCccccccccCCCCcCCcch-hccCCCCchhhHHH---HHHHHHHHHhCCCCCCCC------CH
Confidence            56799999998863            7888999998 44455678899999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .... .....+..      .+....+    ..+.++...|++.+|.+||++.++++
T Consensus       221 ~~~~-~~~~~~~~------~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          221 KETY-LRIKKNEY------SIPKHIN----PVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHH-HHHHTTCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHH-HHHhhccC------CCccccC----HHHHHHHHHHcccChhhCcCHHHHhh
Confidence            1111 11111110      1111112    24567888999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.03  E-value=2.3e-11  Score=89.11  Aligned_cols=106  Identities=10%  Similarity=-0.091  Sum_probs=69.5

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           |+..|+|||. ......+.++|+|+   +|+.+++.++|..+.....      ...
T Consensus       149 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~~------~~~  218 (283)
T 3bhy_A          149 PRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWS---IGVITYILLSGASPFLGET------KQE  218 (283)
T ss_dssp             CCEEECCCTTCEECC--------CCCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCTTCCSS------HHH
T ss_pred             CceEEEecccceeccCCCcccccCCCcCccCcce-ecCCCCCcchhhhh---HHHHHHHHHHCCCCCCCcc------hHH
Confidence            3789999998864           7889999998 44556678999999   8888889999887643211      111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ..........  -.+.......    ...+.++...|++.+|.+||++.++++
T Consensus       219 -~~~~~~~~~~--~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          219 -TLTNISAVNY--DFDEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -HHHHHHTTCC--CCCHHHHTTC----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -HHHHhHhccc--CCcchhcccC----CHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence             1111111110  0111111111    234677888999999999999999976

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.03  E-value=1.1e-11  Score=94.00  Aligned_cols=104  Identities=13%  Similarity=-0.027  Sum_probs=68.3

Q ss_pred             cceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            4 KQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         4 ~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      .+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+++.++|..+....        ..
T Consensus       171 ~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~~ll~g~~pf~~~--------~~  238 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGKPVDVWG---CGVILFILLSGCLPFYGT--------KE  238 (351)
T ss_dssp             CEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCSS--------HH
T ss_pred             cEEEecCcceeEecCCCeeecCCcCCcCccCHHH-HcCCCCCchHhhHH---HHHHHHHHHHCCCCCCCc--------HH
Confidence            489999998864            7889999998 43445578999999   888888999998775321        00


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+..  ...+......    ...+..+...|++.+|.+||++.++++
T Consensus       239 ~~~~~i~~~~~--~~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          239 RLFEGIIKGKY--KMNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHTCC--CCCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHcCCC--CCCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11111111111  0111110111    134667888999999999999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.03  E-value=1.6e-11  Score=92.90  Aligned_cols=103  Identities=10%  Similarity=-0.003  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       141 ~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~------~~  210 (337)
T 1o6l_A          141 DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYNQ------DH  210 (337)
T ss_dssp             TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGG-GSSSCBCTTHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCEEEeeccchhhcccCCCcccccccChhhCChhh-hcCCCCCchhhccc---chhHHHHHhcCCCCCCCC------CH
Confidence            56799999999874            7889999998 44445678999999   888889999998765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......... +..      .+....+    ..+..+...|++.+|.+||     +..+|.+
T Consensus       211 ~~~~~~i~~-~~~------~~p~~~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          211 ERLFELILM-EEI------RFPRTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHH-CCC------CCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHc-CCC------CCCCCCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            111111111 110      1111112    2456677899999999999     8888864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.03  E-value=3.4e-11  Score=90.04  Aligned_cols=105  Identities=8%  Similarity=-0.139  Sum_probs=69.4

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.+||..+....      .....
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~------~~~~~  226 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI-VNYEPLGLEADMWS---IGVITYILLSGASPFLGD------TKQET  226 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSCCSSCCS------SHHHH
T ss_pred             CEEEccCccceecCccccccccCCCCCccCccc-ccCCCCCCccccHH---HHHHHHHHHHCCCCCCCC------CHHHH
Confidence            689999998864           7889999998 44455678999999   888899999998765321      11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . ........  -.++......+    ..+..+...|++.+|.+||++.++++
T Consensus       227 ~-~~i~~~~~--~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          227 L-ANITSVSY--DFDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             H-HHHHTTCC--CCCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             H-HHHHhccc--ccChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1 11111110  01111111111    34667888999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.03  E-value=4.6e-11  Score=89.28  Aligned_cols=106  Identities=14%  Similarity=0.054  Sum_probs=67.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.            |+..|+|||....    ....+.++|+|+   ||+.+++.+||..+....    
T Consensus       165 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~----  237 (326)
T 2x7f_A          165 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS---LGITAIEMAEGAPPLCDM----  237 (326)
T ss_dssp             TCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHH---HHHHHHHHHHSSCTTTTS----
T ss_pred             CCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHH---HHHHHHHHHhCCCCCCCC----
Confidence            56799999998764            7889999998321    345678899999   888899999988764321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        ........... ........    ..++    ..+..+...|++.+|.+||++.++++
T Consensus       238 --~~~~~~~~~~~-~~~~~~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          238 --HPMRALFLIPR-NPAPRLKS----KKWS----KKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             --CHHHHHHHHHH-SCCCCCSC----SCSC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             --cHHHHHHHhhc-CccccCCc----cccC----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence              11111111111 11111111    1122    24567788999999999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.02  E-value=9.2e-12  Score=91.07  Aligned_cols=106  Identities=8%  Similarity=-0.117  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. .. ...+.++|+|+   +|+.+++.+||..+.....      ..
T Consensus       145 ~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~-~~-~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~~------~~  213 (277)
T 3f3z_A          145 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV-LE-GLYGPECDEWS---AGVMMYVLLCGYPPFSAPT------DS  213 (277)
T ss_dssp             TCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHH-HT-TCBCTTHHHHH---HHHHHHHHHHSSCSSCCSS------HH
T ss_pred             CCcEEEEecccceeccCccchhccCCCCCccChHH-hc-ccCCchhhehh---HHHHHHHHHHCCCCCCCCC------HH
Confidence            46789999998863           7899999998 32 23678899999   8888999999887653211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . .......+...  .......    .....+..+...|++.+|.+||++.++++
T Consensus       214 ~-~~~~~~~~~~~--~~~~~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          214 E-VMLKIREGTFT--FPEKDWL----NVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             H-HHHHHHHCCCC--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             H-HHHHHHhCCCC--CCchhhh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1 11111111100  0000000    11234667888999999999999999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.02  E-value=4e-11  Score=88.75  Aligned_cols=108  Identities=10%  Similarity=-0.000  Sum_probs=70.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccc-cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYN-ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~-~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.              |+..|+|||...+ ....+.++|+|+   +|+.+++.++|..+....     
T Consensus       145 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~p~~~~-----  216 (305)
T 2wtk_C          145 GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWS---AGVTLYNITTGLYPFEGD-----  216 (305)
T ss_dssp             TCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHH---HHHHHHHHHHSSCSCCCS-----
T ss_pred             CCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHH---HHHHHHHHHhCCCCCCCc-----
Confidence            56789999998863              7889999998322 122367899999   888899999988765321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                       .... .......+..      .+....+    ..+..+...|++.+|.+||++.++++  .++.
T Consensus       217 -~~~~-~~~~i~~~~~------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          217 -NIYK-LFENIGKGSY------AIPGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             -SHHH-HHHHHHHCCC------CCCSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred             -hHHH-HHHHHhcCCC------CCCCccC----HHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence             1111 1111111111      1111122    24567888999999999999999986  4444

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.02  E-value=3.8e-11  Score=91.60  Aligned_cols=105  Identities=8%  Similarity=-0.136  Sum_probs=68.2

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+++.++|..+....   .   ....
T Consensus       157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lGvil~~ll~g~~Pf~~~---~---~~~~  226 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI-VNYEPLGLEADMWS---IGVITYILLSGASPFLGD---T---KQET  226 (361)
T ss_dssp             CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSCCSSCCS---S---HHHH
T ss_pred             CEEEEecCCceEcCCCCccccCCCCccEECchH-HcCCCCCccccHHH---HHHHHHHHHhCCCCCCCC---C---HHHH
Confidence            689999999874           7889999998 44455678899999   888888999988765321   1   1111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ......+..  -.++......+    ..+..+...|++.+|.+||++.++++
T Consensus       227 -~~~i~~~~~--~~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          227 -LANITAVSY--DFDEEFFSQTS----ELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             -HHHHHTTCC--CCCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -HHHHHhcCC--CCCchhccCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             111111110  01111111111    24567788999999999999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.01  E-value=2.1e-11  Score=92.52  Aligned_cols=118  Identities=8%  Similarity=-0.003  Sum_probs=68.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+++.++|+.+.....   .....
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~il~~l~~g~~pf~~~~---~~~~~  243 (362)
T 3pg1_A          170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWS---AGCVMAEMFNRKALFRGST---FYNQL  243 (362)
T ss_dssp             TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHHH
T ss_pred             CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHh---HHHHHHHHHhCCCCCCCCC---HHHHH
Confidence            56799999999974           7788999998444356778899999   8888999999987653211   00111


Q ss_pred             hhhHHhhhCCCee-----------eecccccc---c----cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQ-----------ELMDPVLK---E----SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~-----------~~~d~~l~---~----~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............           +.+...+.   .    ......-..+..+...|++.+|.+||++.++++
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            1111100000000           00000000   0    000111234678889999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.00  E-value=1.1e-10  Score=92.11  Aligned_cols=106  Identities=12%  Similarity=-0.070  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...  ...+.++|+|+   +|+.+++.++|..+....   .   ..
T Consensus       160 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Diws---lG~il~~ll~g~~pf~~~---~---~~  228 (486)
T 3mwu_A          160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR--GTYDEKCDVWS---AGVILYILLSGTPPFYGK---N---EY  228 (486)
T ss_dssp             TCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGG--SCCCHHHHHHH---HHHHHHHHHHSSCSSCCS---S---HH
T ss_pred             CCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhC--CCCCchhhHHH---HHHHHHHHHhCCCCCCCC---C---HH
Confidence            35689999999874           889999999833  34678899999   888888999988775321   1   11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . .......+... .-.+.. ...+    ..+..+...|++.+|.+||++.++++
T Consensus       229 ~-~~~~i~~~~~~-~~~~~~-~~~s----~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          229 D-ILKRVETGKYA-FDLPQW-RTIS----DDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             H-HHHHHHHTCCC-SCSGGG-GGSC----HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             H-HHHHHHhCCCC-CCCccc-CCCC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1 11111111110 000010 1111    24567888999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.00  E-value=2.2e-11  Score=91.75  Aligned_cols=107  Identities=10%  Similarity=0.009  Sum_probs=71.3

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. +.....+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~------~~  246 (335)
T 2owb_A          177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDVWS---IGCIMYTLLVGKPPFETS------CL  246 (335)
T ss_dssp             TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHH-HHTSCBCTHHHHHH---HHHHHHHHHHSSCTTCCS------SH
T ss_pred             CCCEEEeeccCceecccCcccccccCCCccccCHHH-hccCCCCchhhHHH---HHHHHHHHHHCcCCCCCC------CH
Confidence            56799999999863            7889999998 44455678899999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      ..... ....+..      .+....+    ..+..+...|++.+|.+||++.++++  .+..
T Consensus       247 ~~~~~-~~~~~~~------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          247 KETYL-RIKKNEY------SIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             HHHHH-HHHHTCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             HHHHH-HHhcCCC------CCCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            11111 1111110      1111122    23566788999999999999999986  4444

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.00  E-value=4.5e-11  Score=87.75  Aligned_cols=103  Identities=10%  Similarity=-0.073  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||++..          |+..|+|||. ......+.++|+|+   +|+.+++.++|..+....      ....
T Consensus       150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~------~~~~  219 (284)
T 2vgo_A          150 KGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEM-IEGKTHDEKVDLWC---AGVLCYEFLVGMPPFDSP------SHTE  219 (284)
T ss_dssp             TCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHH-HTTCCBCTTHHHHH---HHHHHHHHHHSSCTTCCS------SHHH
T ss_pred             CCCEEEecccccccCcccccccccCCCCcCCHHH-hccCCCCcccchhh---HHHHHHHHHHCCCCCCCC------CHhH
Confidence            46789999998753          7889999998 44455678899999   888888999988765321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. ......      +..+....+    ..+..+...|++.+|.+||++.++++
T Consensus       220 ~~-~~~~~~------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          220 TH-RRIVNV------DLKFPPFLS----DGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HH-HHHHTT------CCCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HH-HHHhcc------ccCCCCcCC----HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            11 111111      111111122    24567888999999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.99  E-value=5.8e-11  Score=91.06  Aligned_cols=55  Identities=5%  Similarity=-0.182  Sum_probs=42.9

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||++..                   ||..|+|||...+. ...+.++|+|+   +|+.+++.++|..+..
T Consensus       164 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws---lG~il~el~~g~~pf~  238 (389)
T 3gni_B          164 DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS---VGITACELANGHVPFK  238 (389)
T ss_dssp             TCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHH---HHHHHHHHHHSSCTTT
T ss_pred             CCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHH---HHHHHHHHHHCCCCCC
Confidence            56789999987642                   67789999983322 45678899999   8888999999987754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.99  E-value=2.2e-11  Score=92.21  Aligned_cols=117  Identities=9%  Similarity=-0.030  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||...+....+.++|+|+   +|+.+++.++|..+....-   .......
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~~---~~~~~~~  235 (353)
T 3coi_A          162 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS---VGCIMAEMLTGKTLFKGKD---YLDQLTQ  235 (353)
T ss_dssp             TCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHH---HHHHHHHHHHSSCSSBSSC---HHHHHHH
T ss_pred             CCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHH---HHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            56899999999875         7899999998443356678899999   8888999999987653211   0011111


Q ss_pred             hHHhhhCC------Ce------------eeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEG------NV------------QELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~------~~------------~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........      .+            .....+.+.. ........+..+...|++.+|.+||++.++++
T Consensus       236 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          236 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTT-TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHH-hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11000000      00            0000000000 00112235677888999999999999999975

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.98  E-value=9.6e-11  Score=90.49  Aligned_cols=105  Identities=10%  Similarity=-0.022  Sum_probs=66.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC--c
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG--F   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~--~   67 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+.........  .
T Consensus       189 ~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~-l~~~~~~~~~Diws---lGvllyell~G~~Pf~~~~~~~~~~~  264 (396)
T 4dc2_A          189 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRGEDYGFSVDWWA---LGVLMFEMMAGRSPFDIVGSSDNPDQ  264 (396)
T ss_dssp             TSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSTTTTC------
T ss_pred             CCCEEEeecceeeecccCCCccccccCCcccCCchh-hcCCCCChHHHHHH---HHHHHHHHHhCCCCCcccccccccch
Confidence            56799999999874            7899999998 43455678999999   88889999999887632111100  0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ....+.......+.      ..+....+    ..+..+...|++.+|.+||+.
T Consensus       265 ~~~~~~~~~i~~~~------~~~p~~~s----~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          265 NTEDYLFQVILEKQ------IRIPRSLS----VKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             CCHHHHHHHHHHCC------CCCCTTSC----HHHHHHHHHHTCSCTTTSTTC
T ss_pred             hhHHHHHHHHhccc------cCCCCcCC----HHHHHHHHHHhcCCHhHcCCC
Confidence            01111111111111      01111112    245677889999999999995

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.98  E-value=5.4e-11  Score=91.53  Aligned_cols=106  Identities=7%  Similarity=-0.051  Sum_probs=67.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      +..+||+|||+++.           ||..|+|||....  ....+.++|+|+   +|+.+.+.++|..+.......   .
T Consensus       151 ~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwS---lG~il~elltG~~Pf~~~~~~---~  224 (384)
T 4fr4_A          151 HGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWS---LGVTAYELLRGRRPYHIRSST---S  224 (384)
T ss_dssp             TSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHH---HHHHHHHHHHSSCSSCCCTTS---C
T ss_pred             CCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeec---hHHHHHHHHhCCCCCCCCCCc---c
Confidence            56899999999874           8899999998332  123567899999   888899999998775321111   1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-HHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-MSSVV  124 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-m~~V~  124 (169)
                      ... .........      ......++    ..+..+...|++.+|.+||+ +.+|.
T Consensus       225 ~~~-~~~~~~~~~------~~~p~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          225 SKE-IVHTFETTV------VTYPSAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             HHH-HHHHHHHCC------CCCCTTSC----HHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             HHH-HHHHHhhcc------cCCCCcCC----HHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            111 111111100      00111112    34667888999999999999 66654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.98  E-value=2.7e-11  Score=99.41  Aligned_cols=98  Identities=16%  Similarity=0.054  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||+ +.....+.++|+|+   ||+.+++.++|..+....      ..
T Consensus       478 ~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~~~~DvwS---lGvilyelltG~~Pf~~~------~~  547 (674)
T 3pfq_A          478 EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEI-IAYQPYGKSVDWWA---FGVLLYEMLAGQAPFEGE------DE  547 (674)
T ss_dssp             SSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHH-HTCCCBSTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCcEEEeecceeeccccCCcccccccCCCcccCHhh-hcCCCCCccceEec---hHHHHHHHHcCCCCCCCC------CH
Confidence            56899999999874            7999999998 44556688999999   888899999998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ........ .+..      ......+    ..+..+...|++.+|.+||+.
T Consensus       548 ~~~~~~i~-~~~~------~~p~~~s----~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          548 DELFQSIM-EHNV------AYPKSMS----KEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             HHHHHHHH-SSCC------CCCTTSC----HHHHHHHHHHSCSSSTTCTTC
T ss_pred             HHHHHHHH-hCCC------CCCccCC----HHHHHHHHHHccCCHHHCCCC
Confidence            11111111 1110      0111112    345677889999999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.97  E-value=3.2e-11  Score=90.61  Aligned_cols=103  Identities=12%  Similarity=-0.045  Sum_probs=66.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~el~~g~~pf~~~------~~  226 (327)
T 3a62_A          157 QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI-LMRSGHNRAVDWWS---LGALMYDMLTGAPPFTGE------NR  226 (327)
T ss_dssp             TSCEEECCCSCC----------CTTSSCCTTSCHHH-HTTSCCCTHHHHHH---HHHHHHHHHHSSCSCCCS------SH
T ss_pred             CCcEEEEeCCcccccccCCccccccCCCcCccCHhh-CcCCCCCCcccchh---HHHHHHHHHHCCCCCCCC------CH
Confidence            56799999998864            7899999998 43445678999999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ......... ..      ..+....+    ..+..+...|++.+|.+||     +..++.+
T Consensus       227 ~~~~~~i~~-~~------~~~p~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          227 KKTIDKILK-CK------LNLPPYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHH-TC------CCCCTTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHHHh-CC------CCCCCCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            111111111 11      01111112    3456778899999999999     6667654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.97  E-value=1.6e-10  Score=90.50  Aligned_cols=51  Identities=6%  Similarity=-0.171  Sum_probs=40.9

Q ss_pred             cccceeeeeEeecC---------------------------------------CCCCCCCCCcccccccCCccccCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------------------------------GRTGDDDEGYSYNILRGNKKVESQELP   42 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~   42 (169)
                      +..+||+|||+++.                                       ||..|+|||........+.++|+|+  
T Consensus       192 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwS--  269 (458)
T 3rp9_A          192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS--  269 (458)
T ss_dssp             TCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHH--
T ss_pred             CCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHH--
Confidence            56899999999863                                       4788999997444556788999999  


Q ss_pred             CcCHHHHHHHHhC
Q 041157           43 LFPLDLIHEATRN   55 (169)
Q Consensus        43 ~~~~~ll~~~t~~   55 (169)
                       +|+.+.+.+||.
T Consensus       270 -lG~il~elltg~  281 (458)
T 3rp9_A          270 -IGCIFAELLNMI  281 (458)
T ss_dssp             -HHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHhc
Confidence             888888888753

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.96  E-value=1e-11  Score=93.79  Aligned_cols=117  Identities=13%  Similarity=0.009  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC----------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE----------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.                      ||..|+|||........+.++|+|+   +|+.+++.++|..+..
T Consensus       148 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~  224 (353)
T 2b9h_A          148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS---CGCILAELFLRRPIFP  224 (353)
T ss_dssp             TCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHH---HHHHHHHHHHSSCSCC
T ss_pred             CCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHH---HHHHHHHHHhCCCCCC
Confidence            56799999998863                      5778999997444456788999999   8888888889886643


Q ss_pred             CCCCCCCcchhhhhHHhhhC----CCee--------eec-------cccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           60 NKLGEGGFGPVYKTWKLWCE----GNVQ--------ELM-------DPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        60 ~~~~~~~~~lv~~~~~~~~~----~~~~--------~~~-------d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ..-..   ............    ....        +.+       ...+.. ........+.++...|++.+|.+||++
T Consensus       225 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~  300 (353)
T 2b9h_A          225 GRDYR---HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK-MFPRVNPKGIDLLQRMLVFDPAKRITA  300 (353)
T ss_dssp             CSSHH---HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHH-HSTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCcH---HHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhh-hcccCCHHHHHHHHHhcCcCcccCCCH
Confidence            21100   000000000000    0000        000       000000 000112346678889999999999999


Q ss_pred             HHHHH
Q 041157          121 SSVVV  125 (169)
Q Consensus       121 ~~V~~  125 (169)
                      .++++
T Consensus       301 ~ell~  305 (353)
T 2b9h_A          301 KEALE  305 (353)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.96  E-value=1.3e-11  Score=94.00  Aligned_cols=98  Identities=11%  Similarity=-0.050  Sum_probs=65.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       160 ~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~G~~Pf~~~------~~  229 (353)
T 3txo_A          160 EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI-LQEMLYGPAVDWWA---MGVLLYEMLCGHAPFEAE------NE  229 (353)
T ss_dssp             TSCEEECCCTTCBCSCC---------CCGGGCCHHH-HHHHHCTTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCEEEccccceeecccCCccccccCCCcCeEChhh-cCCCCcCCccCCCc---chHHHHHHHhCCCCCCCC------CH
Confidence            56799999999884            8899999998 44555678999999   888889999998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ......... +.   .   .......    ..+..+...|++.+|.+||+.
T Consensus       230 ~~~~~~i~~-~~---~---~~p~~~~----~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          230 DDLFEAILN-DE---V---VYPTWLH----EDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             HHHHHHHHH-CC---C---CCCTTSC----HHHHHHHHHHTCSSGGGSTTS
T ss_pred             HHHHHHHHc-CC---C---CCCCCCC----HHHHHHHHHHhhhCHHHccCC
Confidence            111111111 11   0   0111111    235667889999999999998

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.96  E-value=2.3e-11  Score=93.24  Aligned_cols=105  Identities=10%  Similarity=-0.071  Sum_probs=68.5

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       175 ~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~G~~Pf~~~------~~  244 (373)
T 2r5t_A          175 QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWC---LGAVLYEMLYGLPPFYSR------NT  244 (373)
T ss_dssp             TSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCTTCCS------BH
T ss_pred             CCCEEEeeCccccccccCCCccccccCCccccCHHH-hCCCCCCchhhhHH---HHHHHHHHHcCCCCCCCC------CH
Confidence            56899999999874            7899999998 44455678899999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML  127 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L  127 (169)
                      ......... +..      .+....+    ..+..+...|++.+|.+||++.+.+..+
T Consensus       245 ~~~~~~i~~-~~~------~~~~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~i  291 (373)
T 2r5t_A          245 AEMYDNILN-KPL------QLKPNIT----NSARHLLEGLLQKDRTKRLGAKDDFMEI  291 (373)
T ss_dssp             HHHHHHHHH-SCC------CCCSSSC----HHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred             HHHHHHHHh-ccc------CCCCCCC----HHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence            111111111 110      0111122    2356677899999999999986544333

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.95  E-value=5.1e-11  Score=93.94  Aligned_cols=106  Identities=10%  Similarity=-0.070  Sum_probs=69.5

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||...  ...+.++|+|+   +|+.+++.++|..+....   .   ..
T Consensus       165 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Diws---lG~il~~ll~g~~pf~~~---~---~~  233 (484)
T 3nyv_A          165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH--GTYDEKCDVWS---TGVILYILLSGCPPFNGA---N---EY  233 (484)
T ss_dssp             TCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHH--TCCCTHHHHHH---HHHHHHHHHHSSCSSCCS---S---HH
T ss_pred             CCcEEEEeeeeeEEcccccccccCCCCccccCceeec--CCCCCcceeHH---HHHHHHHHHHCCCCCCCC---C---HH
Confidence            46789999998864           899999999832  24678899999   888888999998775321   1   11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . .......+... .-.+.. ...    ...+..+...|++.+|.+||++.++++
T Consensus       234 ~-~~~~i~~~~~~-~~~~~~-~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          234 D-ILKKVEKGKYT-FELPQW-KKV----SESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             H-HHHHHHHCCCC-CCSGGG-GGS----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-HHHHHHcCCCC-CCCccc-ccC----CHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            1 11111111110 000100 111    134567888999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.95  E-value=1.5e-10  Score=91.63  Aligned_cols=105  Identities=11%  Similarity=-0.029  Sum_probs=68.3

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||..|+|||. +. ...+.++|+|+   +|+.+++.++|..+....      ....
T Consensus       176 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~-l~-~~~~~~~Diws---lG~il~~ll~g~~pf~~~------~~~~  244 (494)
T 3lij_A          176 ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LR-KKYDEKCDVWS---IGVILFILLAGYPPFGGQ------TDQE  244 (494)
T ss_dssp             CCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHH-HT-TCBCTHHHHHH---HHHHHHHHHHSSCSSCCS------SHHH
T ss_pred             CcEEEEECCCCeECCCCccccccCCCcCeeCHHH-Hc-ccCCCchhHHH---HHHHHHHHHhCCCCCCCC------CHHH
Confidence            4589999998864           8999999998 43 34678899999   888888999988765321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+.. ..-.+.. ...+    ..+..+...|++.+|.+||++.++++
T Consensus       245 -~~~~i~~~~~-~~~~~~~-~~~s----~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          245 -ILRKVEKGKY-TFDSPEW-KNVS----EGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             -HHHHHHHTCC-CCCSGGG-TTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHhCCC-CCCchhc-ccCC----HHHHHHHHHHCCCChhhCccHHHHhc
Confidence             1111111111 0111111 1111    24567888999999999999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.95  E-value=4.7e-11  Score=89.53  Aligned_cols=102  Identities=12%  Similarity=-0.007  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      .....
T Consensus       142 ~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~------~~~~~  211 (318)
T 1fot_A          142 NGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEV-VSTKPYNKSIDWWS---FGILIYEMLAGYTPFYDS------NTMKT  211 (318)
T ss_dssp             TSCEEECCCSSCEECSSCBCCCCSCTTTCCHHH-HTTCCBCTTHHHHH---HHHHHHHHHHSSCTTCCS------SHHHH
T ss_pred             CCCEEEeecCcceecCCccccccCCccccCHhH-hcCCCCCcccchhh---hHHHHHHHHhCCCCCCCC------CHHHH
Confidence            56799999999874         8999999998 44455678899999   888888999988765321      11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVV  124 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~  124 (169)
                      ...... +..      ......+    ..+..+...|++.+|.+||     +..++.
T Consensus       212 ~~~i~~-~~~------~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~  257 (318)
T 1fot_A          212 YEKILN-AEL------RFPPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVK  257 (318)
T ss_dssp             HHHHHH-CCC------CCCTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred             HHHHHh-CCC------CCCCCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence            111111 110      1111122    2456677899999999999     888886

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.95  E-value=5.8e-12  Score=93.68  Aligned_cols=118  Identities=7%  Similarity=-0.146  Sum_probs=70.5

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +..+||+|||+++.               ++..|+|||...+....+.++|+|+   ||+.+++.+||+.+......   
T Consensus       157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s---lG~il~el~~g~~pf~~~~~---  230 (320)
T 2i6l_A          157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA---AGCIFAEMLTGKTLFAGAHE---  230 (320)
T ss_dssp             TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHH---HHHHHHHHHHSSCSSCCSSH---
T ss_pred             CCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHh---HHHHHHHHHhCCCCCCCCCH---
Confidence            46789999998874               4788999997444456778999999   88889999998876532110   


Q ss_pred             cchhhhhHHhhhC----------CCeeeecccccc-cccc-----HHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           67 FGPVYKTWKLWCE----------GNVQELMDPVLK-ESFI-----LEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        67 ~~lv~~~~~~~~~----------~~~~~~~d~~l~-~~~~-----~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .............          ..+...+..... ....     ......+.++...|++.+|.+||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            0011110000000          000000000000 0000     011235678889999999999999999976

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.94  E-value=9.1e-11  Score=89.11  Aligned_cols=103  Identities=14%  Similarity=-0.014  Sum_probs=68.9

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +..+||+|||+++.         ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      .....
T Consensus       177 ~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~------~~~~~  246 (350)
T 1rdq_E          177 QGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEI-ILSKGYNKAVDWWA---LGVLIYEMAAGYPPFFAD------QPIQI  246 (350)
T ss_dssp             TSCEEECCCTTCEECSSCBCCCEECGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCCS------SHHHH
T ss_pred             CCCEEEcccccceeccCCcccccCCccccCHHH-hcCCCCCCcCCEec---ccHhHhHHhhCCCCCCCC------CHHHH
Confidence            56799999999874         7899999998 43445678999999   888889999988765321      11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      . .....+..      .+....+    ..+..+...|++.+|.+||+     +.+|.+
T Consensus       247 ~-~~i~~~~~------~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          247 Y-EKIVSGKV------RFPSHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             H-HHHHHCCC------CCCTTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             H-HHHHcCCC------CCCCCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            1 11111111      1111122    24567888999999999998     777754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.93  E-value=1.7e-10  Score=87.48  Aligned_cols=105  Identities=10%  Similarity=-0.004  Sum_probs=65.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC--c
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG--F   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~--~   67 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+.........  .
T Consensus       146 ~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~pf~~~~~~~~~~~  221 (345)
T 3a8x_A          146 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRGEDYGFSVDWWA---LGVLMFEMMAGRSPFDIVGSSDNPDQ  221 (345)
T ss_dssp             TSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCTTTTTTC------
T ss_pred             CCCEEEEeccccccccCCCCcccccCCCccccCccc-cCCCCCChHHhHHH---HHHHHHHHHhCCCCcCCccccccccc
Confidence            56899999999874            7889999998 43445578899999   88889999999877532111100  0


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ............+..      .+....+    ..+..+...|++.+|.+||+.
T Consensus       222 ~~~~~~~~~i~~~~~------~~p~~~s----~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          222 NTEDYLFQVILEKQI------RIPRSLS----VKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             -CHHHHHHHHHHCCC------CCCTTSC----HHHHHHHHHHTCSSTTTSTTC
T ss_pred             ccHHHHHHHHHcCCC------CCCCCCC----HHHHHHHHHHhcCCHhHCCCC
Confidence            011111111111110      1111112    245677889999999999995

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.93  E-value=5.1e-11  Score=94.53  Aligned_cols=105  Identities=12%  Similarity=-0.078  Sum_probs=68.4

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.+||+|||+++.           ||..|+|||. .. ...+.++|+|+   +|+.+++.++|..+....      ....
T Consensus       186 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~-~~-~~~~~~~Diws---lG~il~~ll~g~~pf~~~------~~~~  254 (504)
T 3q5i_A          186 LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LK-KKYNEKCDVWS---CGVIMYILLCGYPPFGGQ------NDQD  254 (504)
T ss_dssp             SSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHH-HT-TCBCTHHHHHH---HHHHHHHHHHSSCSSCCS------SHHH
T ss_pred             ccEEEEECCCCEEcCCCCccccccCCcCCCCHHH-hc-cCCCchHHHHH---HHHHHHHHHhCCCCCCCC------CHHH
Confidence            4689999999864           8999999998 43 34678899999   888888999988765321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       .......+...  .+.......    ...+..+...|++.+|.+||++.++++
T Consensus       255 -~~~~i~~~~~~--~~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          255 -IIKKVEKGKYY--FDFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             -HHHHHHHCCCC--CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHcCCCC--CCccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             11111111110  000000111    134667888999999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.93  E-value=4.6e-11  Score=90.03  Aligned_cols=115  Identities=16%  Similarity=0.022  Sum_probs=69.3

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccC-CccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRG-NKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~-~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.          |+..|+|||...+.... ..++|+|+   +|+.+++.++|..+.......  ..+.
T Consensus       188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s---lG~il~~l~~g~~pf~~~~~~--~~~~  262 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS---LGICLYVMFYNVVPFSLKISL--VELF  262 (348)
T ss_dssp             TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHH---HHHHHHHHHHSSCSSCCSSCS--HHHH
T ss_pred             CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHH---HHHHHHHHHhCCCCCCCCCcH--HHHH
Confidence            56799999998874          78899999983332122 33899999   888899999988765422110  0111


Q ss_pred             hhhHHhhhCCCeeee------ccccccc---cccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQEL------MDPVLKE---SFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~------~d~~l~~---~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                          .....+...-.      ..+....   .........+..+...|++.+|.+||++.++++
T Consensus       263 ----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          263 ----NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             ----HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ----HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                11111111000      0000000   000111235677888999999999999999986

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.92  E-value=4.1e-11  Score=91.15  Aligned_cols=98  Identities=15%  Similarity=0.031  Sum_probs=64.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       157 ~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~G~~Pf~~~------~~  226 (353)
T 2i0e_A          157 EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEI-IAYQPYGKSVDWWA---FGVLLYEMLAGQAPFEGE------DE  226 (353)
T ss_dssp             TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH-HTTCCBSTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCcEEEEeCCcccccccCCcccccccCCccccChhh-hcCCCcCCcccccc---hHHHHHHHHcCCCCCCCC------CH
Confidence            56799999999874            7889999998 44445678999999   888888999988765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM  120 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m  120 (169)
                      ......... +..      ......+    ..+..+...|++.+|.+||+.
T Consensus       227 ~~~~~~i~~-~~~------~~p~~~s----~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          227 DELFQSIME-HNV------AYPKSMS----KEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             HHHHHHHHH-CCC------CCCTTSC----HHHHHHHHHHTCSCTTSCTTC
T ss_pred             HHHHHHHHh-CCC------CCCCCCC----HHHHHHHHHHhhcCHHHcCCC
Confidence            111111111 110      1111112    345678889999999999964

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.90  E-value=1.8e-10  Score=89.74  Aligned_cols=53  Identities=9%  Similarity=-0.177  Sum_probs=42.1

Q ss_pred             cccceeeeeEeecC----------------------------------CCCCCCCCCcccccccCCccccCCCCCCcCHH
Q 041157            2 NAKQKVLQFLRSGE----------------------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLD   47 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------------------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~   47 (169)
                      +..+||+|||+++.                                  ||..|+|||........+.++|+|+   +|+.
T Consensus       165 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwS---lG~i  241 (432)
T 3n9x_A          165 DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWS---TGCI  241 (432)
T ss_dssp             TCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHH---HHHH
T ss_pred             CCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccch---HHHH
Confidence            56899999998863                                  5788999997444556788999999   8888


Q ss_pred             HHHHHHhCCC
Q 041157           48 LIHEATRNFS   57 (169)
Q Consensus        48 ll~~~t~~~~   57 (169)
                      +.+.++|..+
T Consensus       242 l~ell~g~~p  251 (432)
T 3n9x_A          242 FAELLNMLQS  251 (432)
T ss_dssp             HHHHHTTCTT
T ss_pred             HHHHHhcccc
Confidence            8888876443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.89  E-value=1.5e-11  Score=93.26  Aligned_cols=102  Identities=12%  Similarity=0.026  Sum_probs=67.2

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....      ..
T Consensus       154 ~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~Diws---lG~il~ell~g~~Pf~~~------~~  223 (345)
T 1xjd_A          154 DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI-LLGQKYNHSVDWWS---FGVLLYEMLIGQSPFHGQ------DE  223 (345)
T ss_dssp             TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCCS------SH
T ss_pred             CCCEEEeEChhhhhcccCCCcccCCCCCcccCChhh-hcCCCCCChhhhHH---HHHHHHHHhcCCCCCCCC------CH
Confidence            56799999999874            7889999998 43445678899999   888888999988764321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH-HHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS-SVV  124 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~-~V~  124 (169)
                      .. .......+.      +......+    ..+..+...|++.+|.+||++. ++.
T Consensus       224 ~~-~~~~i~~~~------~~~p~~~s----~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          224 EE-LFHSIRMDN------PFYPRWLE----KEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HH-HHHHHHHCC------CCCCTTSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HH-HHHHHHhCC------CCCCcccC----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            11 111111111      11111112    2456778899999999999997 554

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.89  E-value=3.2e-10  Score=83.36  Aligned_cols=106  Identities=12%  Similarity=-0.080  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           |+..|+|||...  ...+.++|+|+   +|+.+++.++|..+....      ...
T Consensus       160 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~------~~~  228 (287)
T 2wei_A          160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR--GTYDEKCDVWS---AGVILYILLSGTPPFYGK------NEY  228 (287)
T ss_dssp             TCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHT--TCCCTHHHHHH---HHHHHHHHHHSSCSSCCS------SHH
T ss_pred             cccEEEeccCcceeecCCCccccccCcccccChHHhc--CCCCCchhhHh---HHHHHHHHHhCCCCCCCC------CHH
Confidence            35689999998874           567899999832  23678899999   888888999988764321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      . .......+...  .+.......+    ..+..+...|++.+|.+||++.++++
T Consensus       229 ~-~~~~~~~~~~~--~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          229 D-ILKRVETGKYA--FDLPQWRTIS----DDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             H-HHHHHHHCCCC--CCSGGGTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             H-HHHHHHcCCCC--CCchhhhhcC----HHHHHHHHHHcccChhhCcCHHHHhc
Confidence            1 11111112110  0100001112    34667888999999999999999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.88  E-value=3e-10  Score=92.81  Aligned_cols=111  Identities=14%  Similarity=-0.078  Sum_probs=66.5

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.+||+|||+++.           ||.+|+|||. ......+.++|+|+   +|+.+++.++|..+....     .....
T Consensus       161 ~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~-l~~~~~s~ksDIwS---LGviLyeLltG~~Pf~~~-----~~~~~  231 (676)
T 3qa8_A          161 LIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL-LEQKKYTVTVDYWS---FGTLAFECITGFRPFLPN-----WQPVQ  231 (676)
T ss_dssp             CEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCS-SCCSCCSTTHHHHH---HHHHHHHHHSSCSSCCSS-----CHHHH
T ss_pred             eeEEEcccccccccccccccccccCCcccCChHH-hccCCCCchhHHHH---HHHHHHHHHHCCCCCCcc-----cchhh
Confidence            3589999999875           7889999998 44556678999999   888899999988765321     11222


Q ss_pred             hhHHhhhCCCeeeeccc----------cc--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHH
Q 041157           72 KTWKLWCEGNVQELMDP----------VL--KESFILEEILKRIHIGLLCVQEDPADRPTMSS  122 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~----------~l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~  122 (169)
                      |................          .+  ...........+..+...|++.+|.+||++.+
T Consensus       232 ~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          232 WHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             SSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            22111110000001111          10  01112233456778888999999999999966

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.88  E-value=1.8e-10  Score=84.88  Aligned_cols=108  Identities=11%  Similarity=0.016  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc-----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN-----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~-----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +..+||+|||+++.           |+..|+|||....     ....+.++|+|+   +|+.+++.++|..+....    
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s---lG~~l~~l~~g~~p~~~~----  232 (298)
T 1phk_A          160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS---TGVIMYTLLAGSPPFWHR----  232 (298)
T ss_dssp             TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH---HHHHHHHHHHSSCSSCCS----
T ss_pred             CCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHh---HHHHHHHHHHCCCCCcCc----
Confidence            56799999998864           7889999998321     234567899999   888899999988764321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        .... .......+.. ....+.. ...    ...+.++...|++.+|.+||++.++++
T Consensus       233 --~~~~-~~~~~~~~~~-~~~~~~~-~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          233 --KQML-MLRMIMSGNY-QFGSPEW-DDY----SDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             --SHHH-HHHHHHHTCC-CCCTTTG-GGS----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --cHHH-HHHHHhcCCc-ccCcccc-ccc----CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              1111 1111111111 1111111 111    234677888999999999999999875

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.87  E-value=1.5e-10  Score=93.16  Aligned_cols=107  Identities=12%  Similarity=-0.027  Sum_probs=68.7

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +.++||+|||+++.           ||..|+|||. +.....+.++|+|+   +|+.+++.++|..+........   ..
T Consensus       322 ~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEv-l~~~~~~~~~DiwS---LGvilyeLltG~~PF~~~~~~~---~~  394 (576)
T 2acx_A          322 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDWWA---LGCLLYEMIAGQSPFQQRKKKI---KR  394 (576)
T ss_dssp             TSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHH-HTTCEESSHHHHHH---HHHHHHHHHHSSCSSSCSSSCC---CH
T ss_pred             CCCeEEEecccceecccCccccccCCCccccCHHH-HcCCCCCccchHHH---HHHHHHHHHhCCCCCcccccch---hH
Confidence            56899999999874           7899999998 43445578899999   8888999999987754321111   11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ...........      .......+    ..+..+...|++.+|.+||     ++.+|.+
T Consensus       395 ~~i~~~i~~~~------~~~p~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          395 EEVERLVKEVP------EEYSERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHHHHHCC------CCCCTTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHHHhhccc------ccCCccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            11111111100      01111112    2456777899999999999     6677753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.86  E-value=1e-10  Score=93.70  Aligned_cols=103  Identities=11%  Similarity=-0.015  Sum_probs=65.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+.+.+||..+........  ..
T Consensus       325 ~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~~~~DiwS---lGvilyelltG~~PF~~~~~~~--~~  398 (543)
T 3c4z_A          325 DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL-LLGEEYDFSVDYFA---LGVTLYEMIAARGPFRARGEKV--EN  398 (543)
T ss_dssp             TSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCCTTCCC--CH
T ss_pred             CCCEEEeecceeeeccCCCcccccccCCccccChhh-hcCCCCChHHhcCc---chHHHHHHHhCCCCCCCCccch--hH
Confidence            56899999999863            8899999998 43445678899999   8888899999987653321110  11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS  121 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~  121 (169)
                      ......... ...      ......+    ..+..+...|++.+|.+||++.
T Consensus       399 ~~~~~~i~~-~~~------~~p~~~s----~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          399 KELKQRVLE-QAV------TYPDKFS----PASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             HHHHHHHHH-CCC------CCCTTSC----HHHHHHHHHHSCSSGGGSCCCB
T ss_pred             HHHHHHHhh-ccc------CCCcccC----HHHHHHHHHhccCCHhHCCCCc
Confidence            111111111 100      0111112    2456677899999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.80  E-value=8.9e-10  Score=90.42  Aligned_cols=97  Identities=11%  Similarity=0.063  Sum_probs=62.7

Q ss_pred             cceeeeeEeecC--------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHH
Q 041157            4 KQKVLQFLRSGE--------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWK   75 (169)
Q Consensus         4 ~~Ki~dFgls~~--------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~   75 (169)
                      .+||+|||+++.        ||.+|+|||. +... .+.++|+|+   ||+.+++..+|..+.....             
T Consensus       219 ~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~-~~~~-~~~~sDi~s---lG~~l~~l~~g~~~~~~~~-------------  280 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSFGYLYGTPGFQAPEI-VRTG-PTVATDIYT---VGRTLAALTLDLPTRNGRY-------------  280 (681)
T ss_dssp             CEEECCCTTCEETTCCSCCCCCTTTSCTTH-HHHC-SCHHHHHHH---HHHHHHHHHSCCCEETTEE-------------
T ss_pred             cEEEEecccchhcccCCccCCCccccCHHH-HcCC-CCCceehhh---hHHHHHHHHhCCCCCcccc-------------
Confidence            689999999874        8999999998 4333 378999999   7777877777643321100             


Q ss_pred             hhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHH-HHHHHh
Q 041157           76 LWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSS-VVVMLA  128 (169)
Q Consensus        76 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~-V~~~L~  128 (169)
                        ..    .+.    ...........+..+...|++.+|.+||+..+ +...|.
T Consensus       281 --~~----~~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          281 --VD----GLP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             --CS----SCC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             --cc----ccc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence              00    000    00001112245677888999999999996544 444444

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.80  E-value=6.1e-11  Score=92.70  Aligned_cols=55  Identities=7%  Similarity=-0.108  Sum_probs=44.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc----cccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN----ILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +..+||+|||+++.             ||..|+|||+...    ....+.++|+|+   +|+.+++.++|..+..
T Consensus       211 ~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwS---lGvil~elltG~~Pf~  282 (437)
T 4aw2_A          211 NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS---LGVCMYEMLYGETPFY  282 (437)
T ss_dssp             TSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHH---HHHHHHHHHHSSCTTC
T ss_pred             CCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHH---HHHHHHHHHhCCCCCC
Confidence            57899999998853             8999999998331    334577999999   8888999999987753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.79  E-value=6.6e-11  Score=91.80  Aligned_cols=108  Identities=8%  Similarity=-0.053  Sum_probs=66.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccc---cCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNIL---RGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~---~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +.++||+|||+++.             ||..|+|||+..+..   ..+.++|+|+   +|+.+.+.+||..+...   . 
T Consensus       204 ~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwS---lGvilyell~G~~Pf~~---~-  276 (410)
T 3v8s_A          204 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS---VGVFLYEMLVGDTPFYA---D-  276 (410)
T ss_dssp             TSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHH---HHHHHHHHHHSSCTTCC---S-
T ss_pred             CCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEec---chHHHHHHHhCCCCCCC---C-
Confidence            56899999999853             899999999833221   1457899999   88889999999877532   1 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCC--CCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPAD--RPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~--RP~m~~V~~  125 (169)
                        ........... +. ..+.-+. ....+    ..+..+...|++.+|.+  ||++.+|.+
T Consensus       277 --~~~~~~~~i~~-~~-~~~~~p~-~~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          277 --SLVGTYSKIMN-HK-NSLTFPD-DNDIS----KEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             --SHHHHHHHHHT-HH-HHCCCCT-TCCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             --ChhhHHHHHHh-cc-ccccCCC-ccccc----HHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence              11111111110 00 0000010 00111    23456667888888888  999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.73  E-value=7.1e-10  Score=86.06  Aligned_cols=108  Identities=7%  Similarity=-0.109  Sum_probs=64.8

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccc------cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYN------ILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~------~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +.++||+|||+++.             ||..|+|||+...      ....+.++|+|+   +|+.+.+.++|..+.... 
T Consensus       198 ~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwS---lGvilyelltG~~Pf~~~-  273 (412)
T 2vd5_A          198 CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA---LGVFAYEMFYGQTPFYAD-  273 (412)
T ss_dssp             TSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHH---HHHHHHHHHHSSCTTCCS-
T ss_pred             CCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhH---HhHHHHHHHhCCCCCCCC-
Confidence            57899999998853             7899999998332      234578899999   888888999998775321 


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCC---CCHHHHHH
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADR---PTMSSVVV  125 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~R---P~m~~V~~  125 (169)
                        .   ............  ...--+.+....+    ..+..+...|+. +|.+|   |+..++.+
T Consensus       274 --~---~~~~~~~i~~~~--~~~~~p~~~~~~s----~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          274 --S---TAETYGKIVHYK--EHLSLPLVDEGVP----EEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             --S---HHHHHHHHHTHH--HHCCCC----CCC----HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             --C---HHHHHHHHHhcc--cCcCCCccccCCC----HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence              1   111111111000  0000111111112    235567778888 88887   68888864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.44  E-value=2.4e-08  Score=73.80  Aligned_cols=99  Identities=12%  Similarity=-0.039  Sum_probs=58.2

Q ss_pred             cccceeeeeEeecCCCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCC
Q 041157            2 NAKQKVLQFLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGN   81 (169)
Q Consensus         2 ~~~~Ki~dFgls~~gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~   81 (169)
                      +..+||+|||+++.-.           ....+.++|+|+   +|+.+++.+||..+........           .....
T Consensus       156 ~~~~kl~Dfg~a~~~~-----------~~~~~~~~Diws---lG~il~el~tg~~pf~~~~~~~-----------~~~~~  210 (299)
T 3m2w_A          156 NAILKLTDFGFAKETT-----------GEKYDKSCDMWS---LGVIMYILLCGYPPFYSNHGLA-----------ISPGM  210 (299)
T ss_dssp             TCCEEECCCTTCEECT-----------TCGGGGHHHHHH---HHHHHHHHHHSSCSCCC------------------CCS
T ss_pred             CCcEEEeccccccccc-----------cccCCchhhHHH---HHHHHHHHHHCCCCCCCCcchh-----------hhHHH
Confidence            5679999999887411           122357899999   8888999999887753211110           00000


Q ss_pred             eeeeccccc--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           82 VQELMDPVL--KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        82 ~~~~~d~~l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...+.....  ...........+..+...|++.+|.+||++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            000111000  00000111235677888999999999999999986

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.09  E-value=1.1e-06  Score=65.84  Aligned_cols=36  Identities=11%  Similarity=0.041  Sum_probs=29.8

Q ss_pred             ccceeeeeEeecC-------CCCCCCCCCcccccccCCccccCCC
Q 041157            3 AKQKVLQFLRSGE-------GRTGDDDEGYSYNILRGNKKVESQE   40 (169)
Q Consensus         3 ~~~Ki~dFgls~~-------gt~~y~ape~~~~~~~~~~~~dv~s   40 (169)
                      +.+||+|||+++.       ||..|+|||...+  ..+.++|+|+
T Consensus       219 ~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g--~~~~~~Diws  261 (336)
T 2vuw_A          219 LQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG--DGDYQFDIYR  261 (336)
T ss_dssp             EEEEECCCTTCBEEETTEEECCCCTTCSGGGCC--CSSHHHHHHH
T ss_pred             ceEEEeeccccEecCCCcEEEeecccChhhhcC--CCccceehhh
Confidence            4899999999986       8999999998332  2278899999

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.55  E-value=3.2e-05  Score=56.79  Aligned_cols=97  Identities=10%  Similarity=0.041  Sum_probs=57.2

Q ss_pred             eEeecCCCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhHHhhhCCCeeeeccc-
Q 041157           10 FLRSGEGRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNVQELMDP-   88 (169)
Q Consensus        10 Fgls~~gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~d~-   88 (169)
                      .|..+.++.+|++|        .+.++|+|+   ||+.+.+.+||+.+.........   ......... +.   ...+ 
T Consensus       165 ~g~~kl~~~~~~~~--------~~~~~Di~s---lG~il~elltg~~Pf~~~~~~~~---~~~~~~~~~-~~---~~~~~  226 (286)
T 3uqc_A          165 DGDVVLAYPATMPD--------ANPQDDIRG---IGASLYALLVNRWPLPEAGVRSG---LAPAERDTA-GQ---PIEPA  226 (286)
T ss_dssp             TSCEEECSCCCCTT--------CCHHHHHHH---HHHHHHHHHHSEECSCCCSBCCC---SEECCBCTT-SC---BCCHH
T ss_pred             CCCEEEEeccccCC--------CCchhHHHH---HHHHHHHHHHCCCCCCcCCcchh---hHHHHHHhc-cC---CCChh
Confidence            33334456677776        367899999   88889999999876532211110   000000000 00   0000 


Q ss_pred             cccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           89 VLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        89 ~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+..    .....+..+...|++.+|.+| ++.++++.|+.
T Consensus       227 ~~~~----~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~  262 (286)
T 3uqc_A          227 DIDR----DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ  262 (286)
T ss_dssp             HHCT----TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred             hccc----CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence            0011    112346778889999999999 99999999986

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.14  E-value=9.2e-06  Score=65.44  Aligned_cols=41  Identities=5%  Similarity=-0.191  Sum_probs=22.2

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPL   43 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~   43 (169)
                      ++.++||+|||+++.            ||++|||||...  +.....+|+|+.++
T Consensus       374 ~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~--g~~~~~~d~~s~g~  426 (569)
T 4azs_A          374 ARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFA--ENKSWNGFWRSAPV  426 (569)
T ss_dssp             TTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-----------------
T ss_pred             CCCCEEEeecccCeeCCCCCccccCceechhhccHHHhC--CCCCCccccccccc
Confidence            367899999999985            789999999832  33455678888544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=95.01  E-value=0.00049  Score=55.07  Aligned_cols=47  Identities=9%  Similarity=0.023  Sum_probs=29.3

Q ss_pred             cceeeeeEeecC-------------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHH
Q 041157            4 KQKVLQFLRSGE-------------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEAT   53 (169)
Q Consensus         4 ~~Ki~dFgls~~-------------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t   53 (169)
                      ++||+|||+++.                   ||..|||||+.... ...+...|.|+   ..+..++.+.
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws---~vl~~l~~v~  533 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWE---IILELMKDVE  533 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHH---HHHHHHHHHH
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHH---HHHHHHHHHH
Confidence            689999999985                   78899999982221 11233345555   4444444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.001
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.002
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	0.002
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	0.003
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.003
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	0.004

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-07
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 69  PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIH-IGLLCVQEDPADRPTMSSVVVML 127
           P   + +   +   ++ + P +   +   E L+ +  I   C   + A R T   +   L
Sbjct: 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 8/51 (15%), Positives = 21/51 (41%)

Query: 77  WCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
                V + ++   +    ++       + + C Q++ A RP  + +V +L
Sbjct: 217 LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 8e-06
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 77  WCEGNVQELMDPVLKESFIL---EEILKRI-HIGLLCVQEDPADRPTMSSVVVML 127
           W   N  +++  + KE   L   E+  + I ++ + C    P DRPT  ++   L
Sbjct: 215 WIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 9/54 (16%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 77  WCEGNVQELMDPVLKES--FILEEILKRI-HIGLLCVQEDPADRPTMSSVVVML 127
           + +   Q++++ + ++       +    +  + L C Q+D   RP    +V  L
Sbjct: 234 YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 7e-05
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 22/93 (23%)

Query: 44  FPLDLIHEATRNFSNE---------NKLGEGGFGPVYK-TWKLWCEGNV-------QELM 86
           F  +  +EA R F+ E           +G G FG V     KL  +  +       +   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 87  DPVLKESFILE-EILKRIH----IGLLCVQEDP 114
               +  F+ E  I+ +      I L  V    
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS 99

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.2 bits (93), Expect = 4e-05
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 77  WCEGNVQELMDPVLKESF--ILEEILKRI-HIGLLCVQEDPADRPTMSSVVVML 127
           +     +E++  V   +     E     + ++  LC  + PADRP+  S+  +L
Sbjct: 243 YYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 5e-05
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 77  WCEGNVQELMDPVLKESFIL--EEILKRI-HIGLLCVQEDPADRPTMSSVVVML 127
           + + N  ++   +L+   +L  E     +  + L C       RP+ S +V  +
Sbjct: 235 YPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 6e-05
 Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 11/72 (15%)

Query: 72  KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDT 131
           +  +   EG + +  D                 +  +C Q +P  RP+   ++  +    
Sbjct: 243 QVLRFVMEGGLLDKPDNCPDML---------FELMRMCWQYNPKMRPSFLEIISSI--KE 291

Query: 132 ITLPQPTQPAFS 143
              P   + +F 
Sbjct: 292 EMEPGFREVSFY 303

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 6e-05
 Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 3/69 (4%)

Query: 77  WCEGNVQELMDPVLKESF--ILEEILKRI-HIGLLCVQEDPADRPTMSSVVVMLATDTIT 133
           + +    E+M  + +        E    +  +   C      DRP   +V   +     +
Sbjct: 213 YKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

Query: 134 LPQPTQPAF 142
           L    +   
Sbjct: 273 LASKVEGHH 281

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 6e-05
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 81  NVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
            V EL++   +         K   +   C Q +P+DRP+ + +    
Sbjct: 224 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 7e-05
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVMLATDTITLPQPTQPA 141
             +   C +++P +RPT   +   L     +     QP 
Sbjct: 244 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVML 127
             +  LC +E P DRPT   +  +L
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVML 127
             I   C +E P DRP  S ++  L
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQL 256

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 7/68 (10%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 77  WCEGNVQELMDPVLKESFILEEILKR--------IHIGLLCVQEDPADRPTMSSVVVMLA 128
           +   N ++ +  ++   ++  ++ K           +   C+++   +RP    ++  + 
Sbjct: 209 YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

Query: 129 TDTITLPQ 136
               +LP+
Sbjct: 269 LLARSLPK 276

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 8/54 (14%), Positives = 18/54 (33%)

Query: 74  WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
             +  +    +++    +         +   I   C   DP  RPT   +V ++
Sbjct: 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 3e-04
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 9/57 (15%)

Query: 77  WCEGNVQELMDPVLKE------SFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
           +C     EL + + +           +E+     +   C +E P +RP+ + ++V L
Sbjct: 227 YCGMTCAELYEKLPQGYRLEKPLNCDDEV---YDLMRQCWREKPYERPSFAQILVSL 280

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 3e-04
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 14/72 (19%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVMLAT--------------DTITLPQPTQPAFSVGRVK 148
             I + C   D   RP    +++  +               + + LP PT   F    + 
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMD 302

Query: 149 SSSDLKVCSANE 160
                 V  A+E
Sbjct: 303 EEDMDDVVDADE 314

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 3e-04
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVML 127
             +  LC   D  +RP  ++V + L
Sbjct: 240 YDLMNLCWTYDVENRPGFAAVELRL 264

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 9/55 (16%)

Query: 59  ENKLGEGGFGPVYK-TWKLWCEGNV-------QELMDPVLKESFILE-EILKRIH 104
           + +LG G FG V K  +++              E  DP LK+  + E  +++++ 
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 3e-04
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 69  PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
           PV + +KL  EG+  +       E   L  +++       C    P+ RPT   +V  L
Sbjct: 242 PVEELFKLLKEGHRMDKPSNCTNE---LYMMMRD------CWHAVPSQRPTFKQLVEDL 291

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 5e-04
 Identities = 13/54 (24%), Positives = 17/54 (31%), Gaps = 9/54 (16%)

Query: 74  WKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVML 127
            +   EG      D    E              L C   +P+ RPT S +V  L
Sbjct: 247 CRRLKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHL 291

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 7e-04
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVML 127
             I   C  E   +RPT   ++  +
Sbjct: 231 YTIMYSCWHEKADERPTFKILLSNI 255

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 6/26 (23%), Positives = 9/26 (34%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVMLA 128
             I   C   D   RP+  ++   L 
Sbjct: 297 YIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 6/25 (24%), Positives = 9/25 (36%)

Query: 103 IHIGLLCVQEDPADRPTMSSVVVML 127
             +   C   D A RP+   +   L
Sbjct: 230 YEVMKNCWHLDAAMRPSFLQLREQL 254

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 10/86 (11%)

Query: 51  EATRNFSNENKLGEGGFGPVYKTWKLWCEGNV-----QELMDPVLKESFILE-EILKRIH 104
           +    ++N + +GEG +G V   +    +  V              +  + E +IL R  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 105 ----IGLLCVQEDPADRPTMSSVVVM 126
               IG+  +   P         +V 
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVT 90

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 11/87 (12%)

Query: 51  EATRNFSNENKLGEGGFGPVYKTWKLWCEGNV------QELMDPVLKESFILE-EILKRI 103
           E    + N + +G G +G V   +       V      +     +  +    E  +LK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 104 H----IGLLCVQEDPADRPTMSSVVVM 126
                IGLL V          + V ++
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLV 101

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.004
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 46  LDLIHEATRNFSNENKLGEGGFGPVYKTWKLWCEGNV-----QELMDPVLKESFILE-EI 99
           ++L  +   +F   ++LG G  G V+K         +        + P ++   I E ++
Sbjct: 1   MELKDD---DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57

Query: 100 LKRIH----IGLLCVQEDP 114
           L   +    +G        
Sbjct: 58  LHECNSPYIVGFYGAFYSD 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.75
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.71
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.71
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.71
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.69
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.67
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.67
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.66
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.66
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.66
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.63
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.62
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.62
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.62
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.59
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.58
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.56
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.56
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.54
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.53
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.53
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.51
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.51
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.48
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.46
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.45
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.45
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.44
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.43
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.42
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.41
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.34
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.34
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.33
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.3
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.3
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.29
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.28
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.28
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.27
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.27
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.24
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.24
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.21
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.2
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.19
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.19
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.17
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.16
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.11
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.1
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.05
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.03
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.01
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.94
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.91
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.87
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.8

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.8e-20  Score=137.14  Aligned_cols=110  Identities=15%  Similarity=0.058  Sum_probs=75.3

Q ss_pred             CcccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +++++||+|||+++.               ||..|||||+ +.....+.++|+||   ||+.++|..|++.+......  
T Consensus       145 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~-l~~~~~~~~sDI~S---~Gvil~el~t~~~~~~~~~~--  218 (283)
T d1mqba_         145 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA-ISYRKFTSASDVWS---FGIVMWEVMTYGERPYWELS--  218 (283)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSCHHH-HHSCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTCC--
T ss_pred             CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHH-HccCCCCCcccccc---cHHHHHHHHhCCCCccccCC--
Confidence            368999999999974               6788999998 55667788999999   88889999887665432111  


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         . ..+......+.         ....+.++...+.+++.+|++.+|++||+|.+|++.|+.
T Consensus       219 ---~-~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~  269 (283)
T d1mqba_         219 ---N-HEVMKAINDGF---------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  269 (283)
T ss_dssp             ---H-HHHHHHHHTTC---------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ---H-HHHHHHHhccC---------CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHH
Confidence               1 11111222221         111122233457789999999999999999999999976

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.3e-19  Score=132.71  Aligned_cols=114  Identities=15%  Similarity=-0.035  Sum_probs=78.9

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++++||+|||+++.             ||..|+|||+ ......+.++|+||   ||+.+++.+|++.+.....     .
T Consensus       149 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~ksDI~S---~Giil~el~t~~~p~~~~~-----~  219 (285)
T d1fmka3         149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWS---FGILLTELTTKGRVPYPGM-----V  219 (285)
T ss_dssp             GGCEEECCCCTTC--------------CCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCSSTTC-----C
T ss_pred             CCcEEEcccchhhhccCCCceeeccccccccccChHH-HhCCCCCcHHhhhc---chHHHHHHHhCCCCCCCCC-----C
Confidence            68899999999974             7889999999 55667788999999   8888999999876643311     1


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATDTITL  134 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~~~~~  134 (169)
                      ... .......+..     .....    .+...+.+++.+|++.+|++||+|.+|+++|+......
T Consensus       220 ~~~-~~~~i~~~~~-----~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         220 NRE-VLDQVERGYR-----MPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHH-HHHHHHTTCC-----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHH-HHHHHHhcCC-----CCCCc----ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            111 1111112211     11111    12235678889999999999999999999999844433

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=9.3e-20  Score=132.02  Aligned_cols=110  Identities=20%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             CcccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +++++||+|||+++.             ||..|+|||. +.....+.++||||   ||+.+.|.+|++.+.....     
T Consensus       136 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~-l~~~~~~~k~DVwS---~Gvil~el~t~~~~~~~~~-----  206 (263)
T d1sm2a_         136 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS---FGVLMWEVFSEGKIPYENR-----  206 (263)
T ss_dssp             GGGCEEECSCC------------------CTTSCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHTTSCCTTCSC-----
T ss_pred             CCCCeEecccchheeccCCCceeecceecCcccCChHH-hcCCCCCchhhhcc---hHHHHHHHHHCCCCCCCCC-----
Confidence            368899999999985             7889999998 54556788999999   8888889999765532211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+.  ....+..       +...+.+++..|++.+|.+||+|.+|++.|+.
T Consensus       207 ~~~~-~~~~i~~~~--~~~~p~~-------~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         207 SNSE-VVEDISTGF--RLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             CHHH-HHHHHHHTC--CCCCCTT-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHHhcC--CCCCccc-------cCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            1111 111111111  1112221       12356788899999999999999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=9e-20  Score=132.71  Aligned_cols=110  Identities=15%  Similarity=0.069  Sum_probs=76.2

Q ss_pred             CcccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +++++||+|||+|+.             ||..|+|||+ +.....+.++|+||   ||+.+.+.+|++.+.....     
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~-~~~~~~~~~sDvwS---~Gvvl~ellt~~~~~~~~~-----  214 (272)
T d1qpca_         144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWS---FGILLTEIVTHGRIPYPGM-----  214 (272)
T ss_dssp             TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTTCCSSTTC-----
T ss_pred             cccceeeccccceEEccCCccccccccCCcccccChHH-HhCCCCCchhhhhh---hHHHHHHHHhCCCCCCCCC-----
Confidence            468999999999974             7789999998 54556678999999   8888999999766543211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .........+.  ....   ....    ...+.+++..|++.+|++||||.+|++.|+.
T Consensus       215 ~~-~~~~~~i~~~~--~~~~---p~~~----~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         215 TN-PEVIQNLERGY--RMVR---PDNC----PEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CH-HHHHHHHHTTC--CCCC---CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CH-HHHHHHHHhcC--CCCC---cccC----hHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            11 11111222221  1111   1112    2346778899999999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=8.5e-19  Score=127.75  Aligned_cols=116  Identities=12%  Similarity=0.017  Sum_probs=77.6

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +++++||+|||+|+.              ||+.|||||+...  ....+.++|+||   ||+.+.|.+||+.|.....  
T Consensus       139 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS---~Gv~l~el~tg~~Pf~~~~--  213 (276)
T d1uwha_         139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA---FGIVLYELMTGQLPYSNIN--  213 (276)
T ss_dssp             TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHH---HHHHHHHHHHSSCTTTTCC--
T ss_pred             CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhh---hHHHHHHHHHCCCCCCCCC--
Confidence            467899999999874              7899999998332  223478899999   8888999999988753211  


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhcC
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLATD  130 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~~  130 (169)
                          ...........+.    ..+.+.. ...++...+.++...|++.+|++||||.+|++.|+..
T Consensus       214 ----~~~~~~~~~~~~~----~~p~~~~-~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         214 ----NRDQIIFMVGRGY----LSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             ----CHHHHHHHHHHTS----CCCCGGG-SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----hHHHHHHHHhcCC----CCCcchh-ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                1111111222221    1121111 1112224567788999999999999999999998863

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=3.1e-19  Score=131.47  Aligned_cols=109  Identities=13%  Similarity=-0.028  Sum_probs=70.6

Q ss_pred             CcccceeeeeEeecC-----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE-----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKL   62 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~   62 (169)
                      +++++||+|||+++.                 ||..|||||. ......+.++||||   ||+.+.|.+| |..+.... 
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~sDvwS---~Gvvl~el~t~g~~Pf~~~-  237 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA-IQYRKFTSASDVWS---YGIVMWEVMSYGERPYWDM-  237 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHH-HHSCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTC-
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHH-HhcCCCCccccccc---chHHHHHHHhCCCCCCCCC-
Confidence            468899999999984                 4678999998 55567788999999   8888888888 55553221 


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                           .... +......+..       +  ..+.++...+.+++..|++.+|++||+|.+|++.|+.
T Consensus       238 -----~~~~-~~~~i~~~~~-------~--~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         238 -----TNQD-VINAIEQDYR-------L--PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             -----CHHH-HHHHHHTTCC-------C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -----CHHH-HHHHHHcCCC-------C--CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                 1111 1111111110       1  1112223456788899999999999999999999876

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.2e-18  Score=128.52  Aligned_cols=122  Identities=13%  Similarity=0.033  Sum_probs=79.1

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCccccc-----ccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGYSYNI-----LRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~-----~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +++++||+|||+++.                ||.+|+|||+....     ...+.++|+|+   ||+.++|.+||..+..
T Consensus       143 ~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S---~Gvvl~el~tg~~~~~  219 (303)
T d1vjya_         143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA---MGLVFWEIARRCSIGG  219 (303)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHH---HHHHHHHHHHTBCBTT
T ss_pred             CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhh---hHHHHHHHhhCCCCCC
Confidence            468999999998874                79999999983221     13467899999   8888999999865432


Q ss_pred             CCCCCC-Ccc-------hhhhhHHhhhCCCeeeeccccccccc-cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           60 NKLGEG-GFG-------PVYKTWKLWCEGNVQELMDPVLKESF-ILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        60 ~~~~~~-~~~-------lv~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..-... .+.       .........    ..+.++|.+.... ..+....+..++..|++.+|.+||||.||++.|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         220 IHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             BCCCCCCTTTTTSCSSCCHHHHHHHH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccccccchhhcccccchHHHHHHHH----hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            111110 000       011111111    1122333332222 23566678889999999999999999999998875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=4.5e-19  Score=130.69  Aligned_cols=109  Identities=17%  Similarity=0.060  Sum_probs=76.3

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      ++++||+|||+|+.              |+..|+|||+ +.....+.++||||   ||+.++|..++..+.....     
T Consensus       176 ~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~t~ksDVwS---~Gvvl~ell~~~~~p~~~~-----  246 (301)
T d1lufa_         176 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES-IFYNRYTTESDVWA---YGVVLWEIFSYGLQPYYGM-----  246 (301)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCTTTTS-----
T ss_pred             CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHH-HccCCCChhhhhcc---chhhHHHHHccCCCCCCCC-----
Confidence            67899999999874              6678999999 55666789999999   8888888888865432111     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .... .......+....+         +......+..+...|++.+|.+||||.||+++|+.
T Consensus       247 ~~~e-~~~~v~~~~~~~~---------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~  298 (301)
T d1lufa_         247 AHEE-VIYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR  298 (301)
T ss_dssp             CHHH-HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHH-HHHHHHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1111 1112222222111         11222357789999999999999999999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1e-18  Score=128.48  Aligned_cols=110  Identities=15%  Similarity=-0.007  Sum_probs=70.1

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      ++++||+|||+|+.              ||..|+|||. +.....+.++|+||   ||+.+.+..|+..+.....     
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~-l~~~~~~~~sDiwS---~Gvil~ellt~~~~p~~~~-----  240 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IFDRVYTIQSDVWS---FGVLLWEIFSLGASPYPGV-----  240 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhH-hhcCCCCcccceee---hHHHHHHHHhCCCCCCCCC-----
Confidence            67899999999974              7889999998 44566788999999   8888888888765422111     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ............+....     +....    ...+.++..+|++.+|.+||||.||++.|+.
T Consensus       241 ~~~~~~~~~~~~~~~~~-----~~~~~----~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         241 KIDEEFCRRLKEGTRMR-----APDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             CCSHHHHHHHHHTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCC-----CCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            11111222222222111     11111    2346778899999999999999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=6.8e-19  Score=128.96  Aligned_cols=110  Identities=19%  Similarity=0.058  Sum_probs=76.6

Q ss_pred             CcccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            1 ENAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +++++||+|||+|+.             |+..|+|||+ +.....+.++|+||   ||+.+.+.++++.+.....     
T Consensus       150 ~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~-~~~~~~~~k~DiwS---~Gv~l~ell~~~~p~~~~~-----  220 (287)
T d1opja_         150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWA---FGVLLWEIATYGMSPYPGI-----  220 (287)
T ss_dssp             GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHH-HHHCCCSHHHHHHH---HHHHHHHHHTTSCCSSTTC-----
T ss_pred             CCCcEEEccccceeecCCCCceeeccccccccccChHH-HcCCCCCchhhhhh---HHHHHHHHHhCCCCCCCcc-----
Confidence            367899999999985             5778999998 44556788999999   8888888888776542211     


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .. .........+.         ....+......+.++...|++.+|.+||||.+|++.|+.
T Consensus       221 ~~-~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~  272 (287)
T d1opja_         221 DL-SQVYELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  272 (287)
T ss_dssp             CH-HHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hH-HHHHHHHhcCC---------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            11 11122222221         111111222457788899999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.5e-18  Score=128.40  Aligned_cols=110  Identities=17%  Similarity=0.104  Sum_probs=77.4

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGE   64 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~   64 (169)
                      +++.+||+|||+++.                ||..|+|||+ ......+.++|+||   ||+.++|.+|++.+.......
T Consensus       165 ~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~ksDI~S---fGivl~El~t~~~p~~~~~~~  240 (311)
T d1r0pa_         165 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWS---FGVLLWELMTRGAPPYPDVNT  240 (311)
T ss_dssp             TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSCC----
T ss_pred             CCCCEEEecccchhhccccccccceecccccccccccChHH-HhcCCCCChhHhhh---hHHHHHHHHHCCCCCCCCCCH
Confidence            468899999999985                6788999998 55667789999999   888899999988765332111


Q ss_pred             CCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           65 GGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        65 ~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ..+..+    ...+.  ....+.       .+...+.+++..|++.+|++||+|.||++.|+.
T Consensus       241 --~~~~~~----i~~g~--~~~~p~-------~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~  290 (311)
T d1r0pa_         241 --FDITVY----LLQGR--RLLQPE-------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  290 (311)
T ss_dssp             ----CHHH----HHTTC--CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --HHHHHH----HHcCC--CCCCcc-------cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence              111111    11222  111211       112356788899999999999999999999987

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=8.4e-19  Score=130.51  Aligned_cols=108  Identities=13%  Similarity=-0.055  Sum_probs=73.9

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~   66 (169)
                      +.++||+|||+|+.              ||..|||||. +.....+.++|+||   ||+.+.+.+| |..+....   ..
T Consensus       200 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~-l~~~~~~~~~DiwS---~Gvil~emlt~g~~Pf~~~---~~  272 (325)
T d1rjba_         200 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES-LFEGIYTIKSDVWS---YGILLWEIFSLGVNPYPGI---PV  272 (325)
T ss_dssp             TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHTTTSCCSSTTC---CC
T ss_pred             CCeEEEeeccccccccCCCceeeeccccCCCccCChHH-HcCCCCCcceeccc---hhHHHHHHHhCCCCCCCCC---CH
Confidence            57899999999985              5789999998 54566788999999   8888888887 55543211   00


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHh
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLA  128 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~  128 (169)
                         ..........+.         ....+......+.++...|++.+|++||||.||++.|.
T Consensus       273 ---~~~~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 ---DANFYKLIQNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             ---SHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ---HHHHHHHHhcCC---------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence               011111222211         11111122235677889999999999999999999985

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.1e-18  Score=127.60  Aligned_cols=108  Identities=11%  Similarity=-0.038  Sum_probs=75.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      ++.+||+|||+++.               ||..|+|||+ +.....+.++||||   ||+.+.|.+| |..|....-   
T Consensus       145 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~ksDVwS---~Gv~l~E~lt~G~~Pf~~~~---  217 (285)
T d1u59a_         145 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWS---YGVTMWEALSYGQKPYKKMK---  217 (285)
T ss_dssp             TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCTTTTCC---
T ss_pred             CCceeeccchhhhcccccccccccccccccCccccChHH-HhCCCCCccchhhc---chHHHHHHHhCCCCCCCCCC---
Confidence            57899999999974               6788999998 54566788999999   8888888887 666543211   


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                         ... +......+...+     +    +......+.++...|++.+|.+||+|.+|++.|+.
T Consensus       218 ---~~~-~~~~i~~~~~~~-----~----p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         218 ---GPE-VMAFIEQGKRME-----C----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             ---THH-HHHHHHTTCCCC-----C----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---HHH-HHHHHHcCCCCC-----C----CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence               111 112222222111     1    11222356788899999999999999999998875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.7e-18  Score=127.32  Aligned_cols=108  Identities=9%  Similarity=-0.027  Sum_probs=73.7

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHh-CCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATR-NFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~-~~~~~~~~~~~~   66 (169)
                      ++++||+|||+++.              ||..|+|||+ +.....+.++|+|+   ||+.++|.+|+ ..+.... ..  
T Consensus       147 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~-l~~~~~~~~sDvwS---~Gvil~el~t~g~~p~~~~-~~--  219 (317)
T d1xkka_         147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES-ILHRIYTHQSDVWS---YGVTVWELMTFGSKPYDGI-PA--  219 (317)
T ss_dssp             TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTS-CG--
T ss_pred             CCCeEeeccccceecccccccccccccccCccccChHH-HhcCCCChhhhhhh---HHHHHHHHHHCCCCCCCCC-CH--
Confidence            57899999999884              6889999998 44556789999999   88888899884 4443211 00  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                          ..+......+..       +  ..+..+...+.++..+|++.+|.+||+|.+|++.|..
T Consensus       220 ----~~~~~~i~~~~~-------~--~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         220 ----SEISSILEKGER-------L--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             ----GGHHHHHHHTCC-------C--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----HHHHHHHHcCCC-------C--CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence                011112211211       0  1111222456778899999999999999999988765

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.7e-18  Score=126.14  Aligned_cols=108  Identities=13%  Similarity=0.017  Sum_probs=74.0

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      ++.+||+|||+++.               ||..|||||. +.....+.++|+||   ||+.+.|.+| |..|....    
T Consensus       143 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~-l~~~~~~~~sDiwS---~Gv~l~ellt~g~~Pf~~~----  214 (277)
T d1xbba_         143 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWS---FGVLMWEAFSYGQKPYRGM----  214 (277)
T ss_dssp             TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTTCCSSTTC----
T ss_pred             cCcccccchhhhhhccccccccccccccCCCceecCchh-hcCCCCCchhhhcc---chhhhhHHhhCCCCCCCCC----
Confidence            57899999999974               7789999998 44556678999999   8888888887 56554321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ... .+......+....         .+..+...+.++...|++.+|.+||+|.+|++.|+.
T Consensus       215 --~~~-~~~~~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         215 --KGS-EVTAMLEKGERMG---------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             --CHH-HHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             --CHH-HHHHHHHcCCCCC---------CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence              111 1112222222111         111122356778899999999999999999998864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.4e-18  Score=126.29  Aligned_cols=110  Identities=13%  Similarity=-0.005  Sum_probs=77.3

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +++++||+|||+++.              ||..|+|||. ......+.++|+|+   ||+.+++.+|+..+....     
T Consensus       168 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~-l~~~~~~~~~Dv~S---~G~il~El~t~~~~p~~~-----  238 (308)
T d1p4oa_         168 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWS---FGVVLWEIATLAEQPYQG-----  238 (308)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHHTSCCTTTT-----
T ss_pred             CCceEEEeecccceeccCCcceeeccceecccccCCHHH-HccCCCCccccccc---HHHHHHHHHhCCCCCCCC-----
Confidence            468999999999984              6889999998 44566678999999   888899999986443211     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+. .....+...++         +......+.++...|++.+|++||+|.+|++.|+.
T Consensus       239 ~~~~~~~-~~i~~~~~~~~---------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~  291 (308)
T d1p4oa_         239 LSNEQVL-RFVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  291 (308)
T ss_dssp             SCHHHHH-HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred             CCHHHHH-HHHHhCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1111111 12222221111         11122457788999999999999999999999988

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=9.4e-18  Score=121.04  Aligned_cols=108  Identities=17%  Similarity=0.059  Sum_probs=74.7

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             ||..|+|||+ ......+.++|+|+   ||+.+.+..| |+.+....      
T Consensus       136 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~ksDiwS---~G~~l~el~t~g~~Pf~~~------  205 (258)
T d1k2pa_         136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSKSDIWA---FGVLMWEIYSLGKMPYERF------  205 (258)
T ss_dssp             TCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCTTTTS------
T ss_pred             CCcEEECcchhheeccCCCceeecccCCCCCcCCcHH-hcCCCCCcceeecc---cchhhHhHHhcCCCCCCCC------
Confidence            57899999999974             6788999998 55667788999999   8888889888 45443211      


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ... .+......+.  ....+.       .....+.++...|++.+|++|||+.++++.|..
T Consensus       206 ~~~-~~~~~i~~~~--~~~~p~-------~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         206 TNS-ETAEHIAQGL--RLYRPH-------LASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CHH-HHHHHHHTTC--CCCCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CHH-HHHHHHHhCC--CCCCcc-------cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            111 1111222221  111121       122356788899999999999999999998864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-17  Score=123.30  Aligned_cols=109  Identities=14%  Similarity=0.003  Sum_probs=74.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. ......+.++|+||   ||+.+++.+++..+.....     ...
T Consensus       163 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~-l~~~~~~~~sDvwS---fGvil~ell~~~~~p~~~~-----~~~  233 (309)
T d1fvra_         163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWS---YGVLLWEIVSLGGTPYCGM-----TCA  233 (309)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHH-HHHCEECHHHHHHH---HHHHHHHHHTTSCCTTTTC-----CHH
T ss_pred             CCceEEccccccccccccccccceecCCcccchHH-hccCCCCccceeeh---hHHHHHHHHhcCCCCCCCC-----CHH
Confidence            56899999999975           7899999998 44566788999999   8888888888765432111     111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      . ......++..     +..    +......+..+..+|++.+|++||+|.+|++.|+.
T Consensus       234 ~-~~~~i~~~~~-----~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~  282 (309)
T d1fvra_         234 E-LYEKLPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  282 (309)
T ss_dssp             H-HHHHGGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             H-HHHHHHhcCC-----CCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1 1111111110     111    11222356778889999999999999999998877

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=4.6e-17  Score=117.65  Aligned_cols=110  Identities=15%  Similarity=-0.007  Sum_probs=72.8

Q ss_pred             CcccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            1 ENAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +++.+||+|||+++.         ++..|+|||+ ......+.++|+||   ||+.+.|.+|++.+.....  ....+..
T Consensus       138 ~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~-l~~~~~t~~sDIwS---fG~il~el~t~~~~p~~~~--~~~~~~~  211 (262)
T d1byga_         138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEA-LREKKFSTKSDVWS---FGILLWEIYSFGRVPYPRI--PLKDVVP  211 (262)
T ss_dssp             TTSCEEECCCCC------------CCTTTSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSCTTS--CGGGHHH
T ss_pred             CCCCEeecccccceecCCCCccccccccCCChHH-HhCCCCChHHHHHh---HHHHHHHHHHCCCCCCCCC--CHHHHHH
Confidence            367899999999996         7889999999 44567789999999   8888999998544322111  1111222


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      +    ...+...+     +....+    ..+.++..+|++.+|.+||+|.+++++|+.
T Consensus       212 ~----i~~~~~~~-----~~~~~~----~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         212 R----VEKGYKMD-----APDGCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             H----HTTTCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             H----HHcCCCCC-----CCccCC----HHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            2    11221111     111112    345678889999999999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.8e-17  Score=118.63  Aligned_cols=108  Identities=14%  Similarity=-0.011  Sum_probs=68.3

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~~~   67 (169)
                      +.++||+|||+++.             ||..|+|||. ......+.++|+||   ||+.+.+.+| |..+.... .  ..
T Consensus       144 ~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~-l~~~~~~~~~DiwS---lGvil~e~lt~g~~P~~~~-~--~~  216 (273)
T d1mp8a_         144 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-INFRRFTSASDVWM---FGVCMWEILMHGVKPFQGV-K--NN  216 (273)
T ss_dssp             TTEEEECC-------------------CCGGGCCHHH-HHHCCCSHHHHHHH---HHHHHHHHHTTSCCTTTTC-C--GG
T ss_pred             CCcEEEccchhheeccCCcceeccceecCcccchhhH-hccCCCCCcccccc---chHHHHHHHhcCCCCCCCC-C--HH
Confidence            56899999999985             6789999998 55566788999999   8888888888 44433221 1  11


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .+.    .....+....     +....    ...+.++...|++.+|.+|||+.+|++.|+.
T Consensus       217 ~~~----~~i~~~~~~~-----~~~~~----~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         217 DVI----GRIENGERLP-----MPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             GHH----HHHHTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH----HHHHcCCCCC-----CCCCC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            111    1122222111     11112    2356778889999999999999999998864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.1e-17  Score=120.56  Aligned_cols=110  Identities=15%  Similarity=0.015  Sum_probs=76.0

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              ||..|+|||+ ......+.++|+|+   ||+.+.+..|++.+.......   
T Consensus       181 ~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DIwS---~G~~l~ellt~g~p~~~~~~~---  253 (311)
T d1t46a_         181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES-IFNCVYTFESDVWS---YGIFLWELFSLGSSPYPGMPV---  253 (311)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTTCCSSTTCCS---
T ss_pred             cCcccccccchheeccCCCcceEeeecccChHHcCHHH-hcCCCCCCcccccc---hHHHHHHHHhCCCCCCCCCCH---
Confidence            46789999999985              6889999998 44666789999999   888888988866554322111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ..........+.         ....+......+.++..+|++.+|.+||+|.+|+++|++
T Consensus       254 --~~~~~~~i~~~~---------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         254 --DSKFYKMIKEGF---------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             --SHHHHHHHHHTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --HHHHHHHHhcCC---------CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence              111122222211         111111122357788899999999999999999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.7e-16  Score=115.12  Aligned_cols=105  Identities=11%  Similarity=0.131  Sum_probs=71.1

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+++.          ||+.|||||. +. ...+.++|+||   +|+.+.+.+||+.|.....      -..
T Consensus       151 ~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~-~~-~~~~~~~DIwS---lGvilyel~~g~~Pf~~~~------~~~  219 (270)
T d1t4ha_         151 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM-YE-EKYDESVDVYA---FGMCMLEMATSEYPYSECQ------NAA  219 (270)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGG-GG-TCCCTHHHHHH---HHHHHHHHHHSSCTTTTCS------SHH
T ss_pred             CCCEEEeecCcceeccCCccCCcccCccccCHHH-hC-CCCCCcCchhh---HHHHHHHHHHCCCCCCCcc------cHH
Confidence            57899999999985          8999999998 43 34678999999   8888999999987753211      111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+..    .+.+.....    ..+.++...|++.+|++|||+.|+++
T Consensus       220 ~~~~~i~~~~~----~~~~~~~~~----~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         220 QIYRRVTSGVK----PASFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHTTTCC----CGGGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCC----CcccCccCC----HHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            11112222111    111111112    23567888999999999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.1e-17  Score=118.56  Aligned_cols=109  Identities=16%  Similarity=0.016  Sum_probs=73.3

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHH-hCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEAT-RNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t-~~~~~~~~~~~~   65 (169)
                      ++++||+|||+++.               |+..|+|||+ ......+.++|+|+   ||+.+.|.+| |..+..   +. 
T Consensus       147 ~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~~Di~S---~Gvil~emlt~G~~Pf~---~~-  218 (273)
T d1u46a_         147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTRTFSHASDTWM---FGVTLWEMFTYGQEPWI---GL-  218 (273)
T ss_dssp             TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHH-HHHCEEEHHHHHHH---HHHHHHHHHTTSCCTTT---TC-
T ss_pred             ccceeeccchhhhhcccCCCcceecCccccCcccCCHHH-HhCCCCCcchhhhh---hHHHHHHHHhCCCCCCC---Cc-
Confidence            57899999999885               6678999998 54566788899999   8888888888 454422   11 


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                        ............+...+     .....+    ..+.++...|++.+|++||||.+|.+.|+.
T Consensus       219 --~~~~~~~~i~~~~~~~~-----~~~~~~----~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         219 --NGSQILHKIDKEGERLP-----RPEDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             --CHHHHHHHHHTSCCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CHHHHHHHHHhCCCCCC-----Cccccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence              11111111112211111     111122    346688899999999999999999998865

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=6.7e-17  Score=118.78  Aligned_cols=109  Identities=17%  Similarity=0.035  Sum_probs=75.6

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.              |+..|+|||+ ......+.++|+|+   ||+.+.+.+|++.+...   .   
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-l~~~~y~~k~DiwS---~Gvvl~ell~~g~~p~~---~---  240 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWS---FGVLLWEIFTLGGSPYP---G---  240 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHH-HHHCCCCHHHHHHH---HHHHHHHHHTTSCCSST---T---
T ss_pred             CCCeEeccchhhccccccccccccccCCCChhhhhhhH-hcCCCCCchhhhHH---hHHHHHHhccCCCCCCC---C---
Confidence            56899999999985              6789999998 44567789999999   88888888885433211   1   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      .....+...+..+....     ...    .....+.++..+|++.+|++|||+.||++.|+.
T Consensus       241 ~~~~~~~~~i~~~~~~~-----~p~----~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~  293 (299)
T d1fgka_         241 VPVEELFKLLKEGHRMD-----KPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  293 (299)
T ss_dssp             CCHHHHHHHHHTTCCCC-----CCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCC-----CCc----cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            11122223333222111     111    112346788999999999999999999999986

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.6e-16  Score=114.19  Aligned_cols=107  Identities=12%  Similarity=0.070  Sum_probs=69.4

Q ss_pred             cccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +.++||+|||+|+.              ||+.|||||...+....+.++|+||   +|+.+.+.+||..+.......   
T Consensus       139 ~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwS---lGvilyeml~G~~pf~~~~~~---  212 (271)
T d1nvra_         139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS---CGIVLTAMLAGELPWDQPSDS---  212 (271)
T ss_dssp             TCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHH---HHHHHHHHHHSSCSCSSSSTT---
T ss_pred             CCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeH---hHHHHHHHHhCCCCCCCCChH---
Confidence            57899999999874              8999999998333334467899999   888899999998876432111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....   ........  ...+  ....+    ..+.++..+|++.+|.+|||+.|+++
T Consensus       213 ~~~~---~~~~~~~~--~~~~--~~~~s----~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         213 CQEY---SDWKEKKT--YLNP--WKKID----SAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             SHHH---HHHHTTCT--TSTT--GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHH---HHHhcCCC--CCCc--cccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0110   11111110  0000  01112    23456778999999999999999854

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.4e-16  Score=112.80  Aligned_cols=104  Identities=12%  Similarity=-0.054  Sum_probs=71.8

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||+.|||||. +.....+.++|+||   ||+.+.+.+||..+....      ..
T Consensus       150 ~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~-l~~~~~~~~~DIwS---lGvilyel~tg~~Pf~~~------~~  219 (269)
T d2java1         150 KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ-MNRMSYNEKSDIWS---LGCLLYELCALMPPFTAF------SQ  219 (269)
T ss_dssp             TSCEEECCHHHHHHC-----------CCCSCCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCSCCCS------SH
T ss_pred             CCcEEEeeccceeecccCCCccccCCCCcccCCHHH-HcCCCCChHHHHHh---hCHHHHHHhhCCCCCCCC------CH
Confidence            57899999999874            8999999998 54556678999999   888899999998765321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .. .......+...     .+...++    ..+.++..+|++.+|.+||++.|+++
T Consensus       220 ~~-~~~~i~~~~~~-----~~~~~~s----~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         220 KE-LAGKIREGKFR-----RIPYRYS----DELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HH-HHHHHHHTCCC-----CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HH-HHHHHHcCCCC-----CCCcccC----HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            11 11112222211     1111222    24567778999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4.5e-16  Score=112.40  Aligned_cols=103  Identities=13%  Similarity=0.019  Sum_probs=71.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.++||+|||+++.          ||..|||||. +.....+.++|+||   +|+.+.+.+||+.+....      ... 
T Consensus       142 ~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~-~~~~~~~~~~DiwS---lGvilyell~G~~Pf~~~------~~~-  210 (263)
T d2j4za1         142 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS---LGVLCYEFLVGKPPFEAN------TYQ-  210 (263)
T ss_dssp             TSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHH-HTTCCCCTTHHHHH---HHHHHHHHHHSSCTTCCS------SHH-
T ss_pred             CCCEeecccceeeecCCCcccccCCCCcccCHHH-HcCCCCCchhhhhh---HhHHHHHHhcCCCCCCCC------CHH-
Confidence            57899999999986          8999999998 44445578999999   888899999998875321      111 


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........+.      ..+....+    ..+..+...|++.+|.+|||+.|+++
T Consensus       211 ~~~~~i~~~~------~~~p~~~s----~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         211 ETYKRISRVE------FTFPDFVT----EGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHTTC------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCC------CCCCccCC----HHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            1111111111      11111122    23556778999999999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.46  E-value=6.8e-15  Score=108.35  Aligned_cols=107  Identities=13%  Similarity=0.015  Sum_probs=66.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|||||. +.....+.++|+||   +|+.+.+.+||..|....   .   ..
T Consensus       146 ~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~-~~~~~~~~~~DiwS---lGvilyell~g~~Pf~~~---~---~~  215 (307)
T d1a06a_         146 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWS---IGVIAYILLCGYPPFYDE---N---DA  215 (307)
T ss_dssp             TCCEEECCC------------------CTTSCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSCCCS---S---HH
T ss_pred             CceEEEeccceeEEccCCCeeeeeeeCccccCcHH-HcCCCCCcHHHhhh---hhHHHHHHHhCCCCCCCC---C---HH
Confidence            56799999999985           8999999998 44455678999999   888888999998875321   1   11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                       ........+.. . .........+    ..+..+...|++.+|.+|||+.|+++
T Consensus       216 -~~~~~i~~~~~-~-~~~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         216 -KLFEQILKAEY-E-FDSPYWDDIS----DSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             -HHHHHHHTTCC-C-CCTTTTTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHhccCC-C-CCCccccCCC----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence             11111111111 0 1111111122    24567888999999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=5.4e-16  Score=114.42  Aligned_cols=106  Identities=16%  Similarity=0.051  Sum_probs=70.6

Q ss_pred             cccceeeeeEeecC--------CCCCCCCCCcccc--cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE--------GRTGDDDEGYSYN--ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~--------gt~~y~ape~~~~--~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +.++||+|||+++.        ||+.|||||+..+  ....+.++|+||   ||+.+.+.++|..+....      ....
T Consensus       151 ~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwS---lGvilyel~~g~~Pf~~~------~~~~  221 (309)
T d1u5ra_         151 PGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS---LGITCIELAERKPPLFNM------NAMS  221 (309)
T ss_dssp             TTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CHHH
T ss_pred             CCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhh---HHHHHHHHHHCCCCCCCC------CHHH
Confidence            57899999999986        8999999998332  233567899999   888888999998775321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... +.......    ..++    ..+..+...|++.+|.+|||+.|+++
T Consensus       222 ~~~~i~~-~~~~~~~~----~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         222 ALYHIAQ-NESPALQS----GHWS----EYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHH-SCCCCCSC----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHh-CCCCCCCC----CCCC----HHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            1111111 11111111    1122    24567778999999999999999975

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=1.1e-14  Score=106.54  Aligned_cols=115  Identities=8%  Similarity=-0.029  Sum_probs=73.7

Q ss_pred             cccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKL   62 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~   62 (169)
                      +..+||+|||+|+.                   ||..|||||. ......+.++|+||   ||+.+.+.+||..+.....
T Consensus       142 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~~l~el~tg~~P~~~~~  217 (299)
T d1ckia_         142 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT-HLGIEQSRRDDLES---LGYVLMYFNLGSLPWQGLK  217 (299)
T ss_dssp             TTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHH-HTTBCCCHHHHHHH---HHHHHHHHHHSSCTTCCCC
T ss_pred             CceeeeeccCcceeccccccccceeccccCCcCCCccccCHHH-HhCCCCCChhhEEe---cCHHHHHHHhCCCcccccc
Confidence            35689999999973                   7899999998 44555688999999   8888999999988764332


Q ss_pred             CCCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           63 GEGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        63 ~~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ...............    . ..-.+.+....+    ..+.++...|++.+|++||++.++.+.|+.
T Consensus       218 ~~~~~~~~~~~~~~~----~-~~~~~~~~~~~p----~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  275 (299)
T d1ckia_         218 AATKRQKYERISEKK----M-STPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRN  275 (299)
T ss_dssp             -------HHHHHHHH----H-HSCHHHHTTTSC----HHHHHHHHHHHHSCTTCCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhccc----C-CCChhHhccCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            221111110000000    0 000001111122    346677889999999999999999887764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.6e-14  Score=105.36  Aligned_cols=107  Identities=14%  Similarity=0.021  Sum_probs=69.6

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCccc----ccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSY----NILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~----~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +.++||+|||+|+.            ||..|+|||+..    .....+.++|+||   +|+.+.+.+||..+....   .
T Consensus       146 ~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwS---lGvilyemltg~~Pf~~~---~  219 (288)
T d2jfla1         146 DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS---LGITLIEMAEIEPPHHEL---N  219 (288)
T ss_dssp             TSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHH---HHHHHHHHHHSSCTTTTS---C
T ss_pred             CCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHH---HHHHHHHHhhCCCCCCCC---C
Confidence            57899999999874            899999999832    1233467899999   888899999998775321   1


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         .......... +....+..       +......+.++...|++.+|.+|||+.|+++
T Consensus       220 ---~~~~~~~i~~-~~~~~~~~-------~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         220 ---PMRVLLKIAK-SEPPTLAQ-------PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             ---GGGHHHHHHH-SCCCCCSS-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---HHHHHHHHHc-CCCCCCCc-------cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               1111111111 11101111       1111124566778999999999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.9e-14  Score=105.58  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=46.8

Q ss_pred             CcccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ++.++||+|||+|+.          ||..|+|||+ +.....+.++|+||   +|+.+.+.+||+.+..
T Consensus       140 ~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEv-l~~~~y~~~~DiWS---lGvil~ell~G~~Pf~  204 (322)
T d1s9ja_         140 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER-LQGTHYSVQSDIWS---MGLSLVEMAVGRYPIP  204 (322)
T ss_dssp             TTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHH-HHCSCCCTTHHHHH---HHHHHHHHHHSSCCSS
T ss_pred             CCCCEEEeeCCCccccCCCccccccCCccccCchH-HcCCCCCcHHHHHH---HHHHHHHHHHCCCCCC
Confidence            357899999999985          9999999999 44556778999999   8888999999988753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.4e-14  Score=105.96  Aligned_cols=106  Identities=14%  Similarity=0.059  Sum_probs=70.7

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. +.....+.++|+|+   +|+.+.+.+||..+....      ..
T Consensus       152 ~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~-~~~~~~~~~~DiwS---lGvilyemltG~~Pf~~~------~~  221 (293)
T d1yhwa1         152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKVDIWS---LGIMAIEMIEGEPPYLNE------NP  221 (293)
T ss_dssp             TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHH-HSSSCBCTHHHHHH---HHHHHHHHHHSSCTTTTS------CH
T ss_pred             CCcEeeccchhheeeccccccccccccCCCccChhh-hcCCCCCchhceeh---HhHHHHHHhhCCCCCCCC------CH
Confidence            56899999999874            8999999998 44455578999999   888899999998775321      11


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........+. ..+   ......+    ..+..+...|++.+|.+||++.|+++
T Consensus       222 ~~~~~~~~~~~~-~~~---~~~~~~s----~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         222 LRALYLIATNGT-PEL---QNPEKLS----AIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHHHHHCS-CCC---SSGGGSC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHhCCC-CCC---CCcccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111111111111 011   1111111    24567788999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-14  Score=106.58  Aligned_cols=109  Identities=10%  Similarity=-0.106  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||+.|+|||. +.....+.++|+|+   +|+.+.+.+||+.+.......   ...
T Consensus       150 ~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~-~~~~~y~~~~DiwS---lGvily~lltg~~Pf~~~~~~---~~~  222 (335)
T d2ozaa1         150 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWS---LGVIMYILLCGYPPFYSNHGL---AIS  222 (335)
T ss_dssp             TCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCC-CCGGGGSHHHHHHH---HHHHHHHHTTSSCSCEETTCC------
T ss_pred             cccccccccceeeeccCCCccccccCCcccCCcHH-HcCCCCCHHHHHHh---hchhHHHHhhCCCCCCCCCHH---HHH
Confidence            35689999999984           8999999998 54556678999999   888899999998775321111   111


Q ss_pred             hhhHHhhhCCCeeeecccc--ccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPV--LKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~--l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .....        .+....  .........-..+..+...|++.+|.+||++.|+++
T Consensus       223 ~~~~~--------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         223 PGMKT--------RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             -------------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHH--------HHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            10000        011111  110001122234677888999999999999999987

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.34  E-value=7.5e-14  Score=104.42  Aligned_cols=107  Identities=9%  Similarity=-0.095  Sum_probs=71.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|||||. +.....+.++|+|+   +|+.+.+.+||..+...   .   ...
T Consensus       162 ~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv-~~~~~~~~~~DiwS---lGvilyell~G~~Pf~~---~---~~~  231 (350)
T d1koaa2         162 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGYYTDMWS---VGVLSYILLSGLSPFGG---E---NDD  231 (350)
T ss_dssp             SCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHH-HHTCCBCHHHHHHH---HHHHHHHHHHSSCSSCC---S---SHH
T ss_pred             CCeEEEeecchheecccccccceecCcccccCHHH-HcCCCCChhHhhhh---hhHHHHHHHhCCCCCCC---C---CHH
Confidence            46799999999875           8999999998 44445578899999   88888899999887532   1   111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ........ +..  -.+.......+    ..+..+...|++.+|.+|||+.|+++
T Consensus       232 ~~~~~i~~-~~~--~~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         232 ETLRNVKS-CDW--NMDDSAFSGIS----EDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHHHHHH-TCC--CSCCGGGGGCC----HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHh-CCC--CCCcccccCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111 110  01111111112    23566778999999999999999987

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.8e-15  Score=108.27  Aligned_cols=103  Identities=9%  Similarity=-0.043  Sum_probs=70.3

Q ss_pred             CcccceeeeeEeecC--------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            1 ENAKQKVLQFLRSGE--------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~--------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      ++..+||+|||+++.              ||..|+|||. +.....+.++|+||   +|+.+.+.+||..+...   .  
T Consensus       143 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~-~~~~~~~~~~DiwS---lGvilyell~g~~Pf~~---~--  213 (288)
T d1uu3a_         143 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL-LTEKSACKSSDLWA---LGCIIYQLVAGLPPFRA---G--  213 (288)
T ss_dssp             TTSCEEECCCTTCEECC----------CCCCGGGCCHHH-HHTCCCCHHHHHHH---HHHHHHHHHHSSCSSCC---S--
T ss_pred             CCceEEecccccceecccCCcccccccccCCccccCcee-eccCCCCcccceeh---hhHHHHHHhhCCCCCCC---c--
Confidence            357899999999874              8999999998 54556678999999   88888899999877532   1  


Q ss_pred             cchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHH
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVV  124 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~  124 (169)
                       ... ........+..      .+....+    ..+.++...|++.+|.+|||+.|+.
T Consensus       214 -~~~-~~~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         214 -NEY-LIFQKIIKLEY------DFPEKFF----PKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             -SHH-HHHHHHHTTCC------CCCTTCC----HHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             -CHH-HHHHHHHcCCC------CCCccCC----HHHHHHHHHHccCCHhHCcCHHHHc
Confidence             111 11111111111      1111122    2356788899999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.7e-14  Score=103.25  Aligned_cols=117  Identities=9%  Similarity=-0.073  Sum_probs=70.9

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +...||+|||+++.            ||..|+|||........+.++|+||   +|+.+.+.+||..+...   ......
T Consensus       136 ~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS---lGvil~el~~g~~pf~~---~~~~~~  209 (299)
T d1ua2a_         136 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA---VGCILAELLLRVPFLPG---DSDLDQ  209 (299)
T ss_dssp             TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHH---HHHHHHHHHHSSCSSCC---SSHHHH
T ss_pred             CCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhh---cchHHHHHHhCcCCCCC---CCHHHH
Confidence            56889999999975            7899999998444445688999999   88888899998754321   111111


Q ss_pred             hhhhHHhhhC---CCee---ee----ccccccccccH-----HHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCE---GNVQ---EL----MDPVLKESFIL-----EEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~---~~~~---~~----~d~~l~~~~~~-----~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..........   ....   ..    .-.... ..+.     ..-..+.++...|++.+|.+|||+.|+++
T Consensus       210 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         210 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC-CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhcCCCChhhccchhccchhhhhccCC-CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            1111111100   0000   00    000000 0011     11134677888999999999999999976

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.8e-14  Score=104.36  Aligned_cols=98  Identities=14%  Similarity=0.179  Sum_probs=68.4

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+|+.          ||..|+|||+..+....+.++|+|+   +|+.+.+.+||+.+....         .
T Consensus       147 ~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwS---lGvilyell~g~~Pf~~~---------~  214 (273)
T d1xwsa_         147 RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS---LGILLYDMVCGDIPFEHD---------E  214 (273)
T ss_dssp             TTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHH---HHHHHHHHHHSSCSCCSH---------H
T ss_pred             CCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCccccccc---ceeeehhHhhCCCCCCCc---------h
Confidence            35789999999985          8999999998433334467799999   888889999998775320         0


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                         .... +..  .+.    ...+    ..+.++..+|++.+|.+|||+.|+++
T Consensus       215 ---~i~~-~~~--~~~----~~~s----~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         215 ---EIIR-GQV--FFR----QRVS----SECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             ---HHHH-CCC--CCS----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHhh-ccc--CCC----CCCC----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence               0111 110  111    1122    23566778999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.1e-13  Score=101.42  Aligned_cols=117  Identities=11%  Similarity=-0.038  Sum_probs=70.6

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+++.           ||..|+|||. +.....+.++|+||   +|+.+.+.+||..+....-   .....
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~-~~~~~y~~~~DiwS---lG~il~ell~g~~pf~~~~---~~~~~  224 (305)
T d1blxa_         152 SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV-LLQSSYATPVDLWS---VGCIFAEMFRRKPLFRGSS---DVDQL  224 (305)
T ss_dssp             TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHH-HTTCCCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHHH
T ss_pred             CCCeeecchhhhhhhcccccCCCcccChhhcCcch-hcCCCCChhehhhc---hHHHHHHHHHCCCCCCCCC---HHHHH
Confidence            56899999999886           8999999998 44555678999999   8888999999987753211   00111


Q ss_pred             hhhHHhh--------hCCC-ee-eeccccc---cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLW--------CEGN-VQ-ELMDPVL---KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~--------~~~~-~~-~~~d~~l---~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......        .... .. .......   ........-..+.++..+|++.+|.+|||+.|+++
T Consensus       225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         225 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1111000        0000 00 0000000   00000011123556788999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.29  E-value=3e-13  Score=98.69  Aligned_cols=114  Identities=6%  Similarity=-0.148  Sum_probs=73.5

Q ss_pred             ccceeeeeEeecC-------------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCC
Q 041157            3 AKQKVLQFLRSGE-------------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLG   63 (169)
Q Consensus         3 ~~~Ki~dFgls~~-------------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~   63 (169)
                      ..+||+|||+|+.                   ||+.|||||. ......+.++|+||   ||+.+.+.+||..+......
T Consensus       143 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~-~~~~~~~~~~DiwS---lG~~l~elltg~~Pf~~~~~  218 (293)
T d1csna_         143 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT-HLGREQSRRDDLEA---LGHVFMYFLRGSLPWQGLKA  218 (293)
T ss_dssp             TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCTTSSCCS
T ss_pred             CceEEcccceeEEcccCccccceeecccCceEEchhhcCHHH-hcCCCCChHHHHHH---hhHHHHHHHhCCCcCCCccc
Confidence            4689999999973                   8999999998 44556788999999   88899999999988643222


Q ss_pred             CCCcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHhc
Q 041157           64 EGGFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVVMLAT  129 (169)
Q Consensus        64 ~~~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~~L~~  129 (169)
                      ..   .......... .+.. .--+.+....+    ..+.++...|++.+|++||+...+.+.|+.
T Consensus       219 ~~---~~~~~~~i~~-~~~~-~~~~~l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~  275 (293)
T d1csna_         219 AT---NKQKYERIGE-KKQS-TPLRELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSK  275 (293)
T ss_dssp             CC---HHHHHHHHHH-HHHH-SCHHHHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             hh---HHHHHHHHHh-ccCC-CChHHhcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            11   1111111000 0000 00001111122    346667778999999999999888777654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.3e-13  Score=100.71  Aligned_cols=105  Identities=10%  Similarity=-0.063  Sum_probs=69.2

Q ss_pred             cceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            4 KQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         4 ~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      .+||+|||+++.           ||..|+|||. +.....+.++|+||   +|+.+.+.+||..+...   ..   ... 
T Consensus       155 ~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~-~~~~~~~~~~DiwS---lGvilyell~g~~Pf~~---~~---~~~-  223 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWS---IGVITYILLSGASPFLG---DT---KQE-  223 (293)
T ss_dssp             CEEECCCTTCEECTTSCBCSCCCCCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCC---SS---HHH-
T ss_pred             ceEecchhhhhhcCCCccccccCCCCcccCHHH-HcCCCCCCcccchh---hhHHHHHHHcCCCCCCC---CC---HHH-
Confidence            589999999875           7889999998 44556678999999   88888899999877532   11   111 


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .......+.. . ..+......    ...+.++...|++.+|.+||++.|+++
T Consensus       224 ~~~~i~~~~~-~-~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         224 TLANVSAVNY-E-FEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHHTTCC-C-CCHHHHTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCC-C-CCchhcCCC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111111111 0 000010111    124567788999999999999999975

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.28  E-value=1.2e-13  Score=103.79  Aligned_cols=106  Identities=9%  Similarity=-0.059  Sum_probs=69.2

Q ss_pred             cccceeeeeEeecC----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            2 NAKQKVLQFLRSGE----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         2 ~~~~Ki~dFgls~~----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      +..+||+|||+|+.          ||..|+|||........+.++|+||   +|+.+.+.+||..+.......   .. .
T Consensus       143 ~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwS---lGvilyemltG~~Pf~~~~~~---~~-~  215 (364)
T d1omwa3         143 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS---LGCMLFKLLRGHSPFRQHKTK---DK-H  215 (364)
T ss_dssp             SSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHH---HHHHHHHHHHSSCSSCSSCSS---CH-H
T ss_pred             CCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhH---HHHHHHHHHhCCCCCCCCCHH---HH-H
Confidence            57899999999985          8999999998433445678899999   888899999999875432111   11 1


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCH-----HHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTM-----SSVV  124 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m-----~~V~  124 (169)
                      .........      ...+....+    ..+..+...|++.+|.+||++     .++.
T Consensus       216 ~~~~~~~~~------~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~~~a~eil  263 (364)
T d1omwa3         216 EIDRMTLTM------AVELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVK  263 (364)
T ss_dssp             HHHHHSSSC------CCCCCSSSC----HHHHHHHHHHTCSSTTTSTTTSSSTHHHHH
T ss_pred             HHHHhcccC------CCCCCCCCC----HHHHHHHHHHcccCHHHhCCCcccCHHHHH
Confidence            111110000      011111122    235677789999999999995     6664

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.27  E-value=1.2e-13  Score=102.02  Aligned_cols=104  Identities=12%  Similarity=-0.001  Sum_probs=69.9

Q ss_pred             CcccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            1 ENAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ++.++||+|||+|+.         ||..|||||. +.....+.++|+|+   +|+.+.+.+||..+....      ....
T Consensus       139 ~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~-l~~~~y~~~~DiwS---lGvilyemltG~~Pf~~~------~~~~  208 (316)
T d1fota_         139 KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEV-VSTKPYNKSIDWWS---FGILIYEMLAGYTPFYDS------NTMK  208 (316)
T ss_dssp             TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHH-HTTCCBCTTHHHHH---HHHHHHHHHHSSCTTCCS------SHHH
T ss_pred             CCCCEEEecCccceEeccccccccCcccccCHHH-HcCCCCCchhhccc---cchhHHHHHhCCCCCCCc------CHHH
Confidence            357899999999986         8999999998 44445567999999   888899999999875321      1111


Q ss_pred             hhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCC-----CHHHHHH
Q 041157           72 KTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRP-----TMSSVVV  125 (169)
Q Consensus        72 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP-----~m~~V~~  125 (169)
                      ...... .+..      .+....+    ..+..+..+|++.+|.+||     ++.++.+
T Consensus       209 ~~~~i~-~~~~------~~p~~~s----~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         209 TYEKIL-NAEL------RFPPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHH-HCCC------CCCTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHH-cCCC------CCCCCCC----HHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            111111 1110      1111122    2355677899999999996     8888864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.27  E-value=1.9e-13  Score=102.26  Aligned_cols=111  Identities=9%  Similarity=-0.073  Sum_probs=73.0

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +..+||+|||+|+.           ||..|+|||+ +.....+.++|+|+   +|+.+.+.+||..+....      ...
T Consensus       165 ~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvilyelltG~~Pf~~~------~~~  234 (352)
T d1koba_         165 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDREPVGFYTDMWA---IGVLGYVLLSGLSPFAGE------DDL  234 (352)
T ss_dssp             CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHH-HTTCCBCHHHHHHH---HHHHHHHHHHSCCSSCCS------SHH
T ss_pred             CCeEEEeecccceecCCCCceeeccCcccccCHHH-HcCCCCCCccchHH---HHHHHHHHHhCCCCCCCC------CHH
Confidence            46789999999875           8999999998 44555678999999   888888999998775321      111


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH--HHhc
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV--MLAT  129 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~--~L~~  129 (169)
                      ...... ..+.. . .........+    ..+.++...|++.+|.+|||+.|+++  .+++
T Consensus       235 ~~~~~i-~~~~~-~-~~~~~~~~~s----~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         235 ETLQNV-KRCDW-E-FDEDAFSSVS----PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             HHHHHH-HHCCC-C-CCSSTTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HHHHHH-HhCCC-C-CCcccccCCC----HHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            111111 11110 0 1111111112    24567888999999999999999976  3544

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2e-13  Score=100.61  Aligned_cols=56  Identities=7%  Similarity=-0.180  Sum_probs=45.9

Q ss_pred             CcccceeeeeEeecC----------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE----------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~----------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ++..+||+|||+++.                ||..|+|||...+....+.++|+||   +|+.+++.+||+.+..
T Consensus       152 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwS---lGvil~el~~g~~pf~  223 (318)
T d3blha1         152 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG---AGCIMAEMWTRSPIMQ  223 (318)
T ss_dssp             TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSCC
T ss_pred             CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHccc---CCceeeeHhhCCCCCC
Confidence            357899999999863                7899999998444455678999999   8888999999987753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.2e-13  Score=98.08  Aligned_cols=118  Identities=8%  Similarity=0.006  Sum_probs=72.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.+.||+|||+|+.            ||..|+|||........+.++|+||   +|+.+++.++|+.+....-   ....
T Consensus       138 ~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwS---lGvily~m~~G~~Pf~~~~---~~~~  211 (298)
T d1gz8a_         138 EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWS---LGCIFAEMVTRRALFPGDS---EIDQ  211 (298)
T ss_dssp             TSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHHH
T ss_pred             cCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccc---cchhhhHHhhCCCCCCCCC---HHHH
Confidence            56789999999975            8999999997454555678999999   8888999999998753211   0011


Q ss_pred             hhhhHHhhhC--C----Ceeee------ccccccccc---cHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCE--G----NVQEL------MDPVLKESF---ILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~--~----~~~~~------~d~~l~~~~---~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      .+........  .    .....      .........   ....-..+.++..+|++.+|.+|||+.|+++
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         212 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            1111110000  0    00000      000000000   0011134566788999999999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.21  E-value=2.4e-12  Score=93.04  Aligned_cols=110  Identities=15%  Similarity=0.082  Sum_probs=71.4

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGG   66 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~   66 (169)
                      +...||+|||.++.               ||..|+|||. +.....+.++|+||   +|+.+.+.+||..+....     
T Consensus       147 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~-~~~~~~~~~~DiwS---lGvilyelltG~~Pf~~~-----  217 (277)
T d1o6ya_         147 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-ARGDSVDARSDVYS---LGCVLYEVLTGEPPFTGD-----  217 (277)
T ss_dssp             TSCEEECCCTTCEECC----------------TTCCHHH-HTTCCCCHHHHHHH---HHHHHHHHHHSSCSCCCS-----
T ss_pred             cccceeehhhhhhhhccccccccccccccCcccccCHHH-HcCCCCCcceeccc---chHHHHHHHhCCCCCCCc-----
Confidence            46789999997653               8999999998 44556678999999   888899999998875321     


Q ss_pred             cchhhhhHHhhhCCCeeeeccccc-cccccHHHHHHHHHHhhhhcCCCCCCCC-CHHHHHHHHhc
Q 041157           67 FGPVYKTWKLWCEGNVQELMDPVL-KESFILEEILKRIHIGLLCVQEDPADRP-TMSSVVVMLAT  129 (169)
Q Consensus        67 ~~lv~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~ia~~C~~~~p~~RP-~m~~V~~~L~~  129 (169)
                       ............+..    .+.. ....+    ..+.++..+|++.+|.+|| ++.++...|..
T Consensus       218 -~~~~~~~~~~~~~~~----~~~~~~~~~s----~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         218 -SPVSVAYQHVREDPI----PPSARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             -SHHHHHHHHHHCCCC----CGGGTSSSCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             -CHHHHHHHHHhcCCC----CCchhccCCC----HHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence             122222222222111    1111 11112    2456677899999999999 89999887764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.20  E-value=5.7e-13  Score=96.75  Aligned_cols=119  Identities=9%  Similarity=0.005  Sum_probs=71.9

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++..+||+|||++..            |+..|+|||...+....+.++|+|+   +|+.+.+.++|+.+....-   ...
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~Diws---lGv~l~el~~G~~pf~~~~---~~~  208 (286)
T d1ob3a_         135 REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWS---VGCIFAEMVNGTPLFPGVS---EAD  208 (286)
T ss_dssp             TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHH---HHHHHHHHHHSSCSCCCSS---HHH
T ss_pred             CCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehh---cCcHHHHHHHCCCCCCCCC---HHH
Confidence            367899999999864            7889999998555556689999999   8888999999987753211   000


Q ss_pred             hhhhhHHhhhC------------CCee---eeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           69 PVYKTWKLWCE------------GNVQ---ELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~------------~~~~---~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...........            ....   ....+..........-..+..+..+|++.+|++|||+.|+++
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111100000            0000   000000000001111134567888999999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=2.3e-13  Score=101.79  Aligned_cols=103  Identities=15%  Similarity=0.009  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYK   72 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~   72 (169)
                      +.++||+|||+++.         ||..|||||. +.....+.++|+|+   +|+.+.+.+||..+...   .   .....
T Consensus       177 ~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~-~~~~~~~~~~DiwS---lGvilyemltG~~Pf~~---~---~~~~~  246 (350)
T d1rdqe_         177 QGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEI-ILSKGYNKAVDWWA---LGVLIYEMAAGYPPFFA---D---QPIQI  246 (350)
T ss_dssp             TSCEEECCCTTCEECSSCBCCCEECGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCC---S---SHHHH
T ss_pred             CCCEEeeeceeeeecccccccccCccccCCHHH-HcCCCCCccccccc---hhHHHHHHHhCCCCCCC---c---CHHHH
Confidence            56899999999985         8999999998 43445578899999   88888999999877532   1   11111


Q ss_pred             hHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCC-----CCHHHHHH
Q 041157           73 TWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADR-----PTMSSVVV  125 (169)
Q Consensus        73 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~R-----P~m~~V~~  125 (169)
                      ..... .+..      ......+    ..+..+...|++.+|.+|     |++.++.+
T Consensus       247 ~~~i~-~~~~------~~p~~~s----~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         247 YEKIV-SGKV------RFPSHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHH-HCCC------CCCTTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHh-cCCC------CCCccCC----HHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            11111 1110      1111122    235677789999999999     48888864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.8e-13  Score=99.04  Aligned_cols=104  Identities=11%  Similarity=0.014  Sum_probs=68.0

Q ss_pred             CcccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcc
Q 041157            1 ENAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFG   68 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~   68 (169)
                      ++..+||+|||+|+.            ||+.|+|||. +.....+.++|+||   +|+.+.+.++|..+...   ..   
T Consensus       140 ~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~-~~~~~y~~~~DiwS---lGvilyeml~G~~pf~~---~~---  209 (337)
T d1o6la_         140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWG---LGVVMYEMMCGRLPFYN---QD---  209 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGG-GSSSCBCTTHHHHH---HHHHHHHHHHSSCSSCC---SS---
T ss_pred             CCCCEEEeecccccccccCCcccccceeCHHHhhhhh-ccCCCCChhhcccc---hhhHHHHHHHCCCCCCC---cC---
Confidence            357899999999985            7899999999 44445578999999   88888899999866432   11   


Q ss_pred             hhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           69 PVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        69 lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      ..... .....+..      .+....+.    .+..+...|++.+|.+||+     ..++.+
T Consensus       210 ~~~~~-~~i~~~~~------~~p~~~s~----~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         210 HERLF-ELILMEEI------RFPRTLSP----EAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHH-HHHHHCCC------CCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHH-HHHhcCCC------CCCccCCH----HHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            11111 11111111      11111222    3456778999999999996     566653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.7e-12  Score=96.81  Aligned_cols=116  Identities=11%  Similarity=-0.008  Sum_probs=70.3

Q ss_pred             ccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhh
Q 041157            3 AKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVY   71 (169)
Q Consensus         3 ~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~   71 (169)
                      ..+||+|||+++.           ||..|+|||...+....+.++|+|+   +|+.+.+.++|..+....-.   .....
T Consensus       160 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwS---lG~il~el~~g~~pf~~~~~---~~~l~  233 (350)
T d1q5ka_         160 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS---AGCVLAELLLGQPIFPGDSG---VDQLV  233 (350)
T ss_dssp             CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHH---HHHHHHHHHHTSCSSCCSSH---HHHHH
T ss_pred             CceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecc---cceEEEehhhCCCCCCCCCH---HHHHH
Confidence            4789999999875           7899999997455556789999999   88889999999876532110   00100


Q ss_pred             hh-----------HHhhhCCCeeeeccccc-----cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           72 KT-----------WKLWCEGNVQELMDPVL-----KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        72 ~~-----------~~~~~~~~~~~~~d~~l-----~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ..           +..... ...+..-+.+     ........-..+.++..+|++.+|.+|||+.|+++
T Consensus       234 ~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         234 EIIKVLGTPTREQIREMNP-NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHHHCCCCHHHHHHHCC----CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCChHHhhhhhcc-chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00           000000 0000000000     00000011123566778999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.16  E-value=1.2e-12  Score=94.74  Aligned_cols=108  Identities=11%  Similarity=0.016  Sum_probs=70.2

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccc-----cccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYN-----ILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEG   65 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~-----~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~   65 (169)
                      +...||+|||+++.           ||..|+|||+..+     ....+.++|+|+   +|+.+.+.+||+.+....    
T Consensus       146 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diws---lGvilyeml~g~~Pf~~~----  218 (277)
T d1phka_         146 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS---TGVIMYTLLAGSPPFWHR----  218 (277)
T ss_dssp             TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH---HHHHHHHHHHSSCSSCCS----
T ss_pred             CCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcc---cchhhhhhccCCCCCCCC----
Confidence            56889999999975           7899999998322     223467899999   888899999998775321    


Q ss_pred             CcchhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           66 GFGPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        66 ~~~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                        .... .......+.. +...+.. ...+    ..+.++..+|++.+|.+||++.||++
T Consensus       219 --~~~~-~~~~i~~~~~-~~~~~~~-~~~s----~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         219 --KQML-MLRMIMSGNY-QFGSPEW-DDYS----DTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             --SHHH-HHHHHHHTCC-CCCTTTG-GGSC----HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --CHHH-HHHHHHhCCC-CCCCccc-ccCC----HHHHHHHHHHccCChhHCcCHHHHHc
Confidence              1111 1111111211 1111111 1122    24667888999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.6e-11  Score=91.33  Aligned_cols=56  Identities=14%  Similarity=0.016  Sum_probs=46.9

Q ss_pred             CcccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            1 ENAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         1 ~~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      ++...|++|||+++.         ||..|+|||...+....+.++|+|+   +|+.+.+.++|+.+..
T Consensus       156 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS---lGvil~ell~g~~pf~  220 (346)
T d1cm8a_         156 EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS---VGCIMAEMITGKTLFK  220 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHH---HHHHHHHHHHSSCSSC
T ss_pred             cccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhc---chHHHHHHHHCcCCCC
Confidence            367889999999986         8999999998555556688999999   8888999999987653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.9e-12  Score=94.54  Aligned_cols=102  Identities=12%  Similarity=0.032  Sum_probs=69.0

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +.++||+|||+++.            ||..|+|||. ......+.++|+|+   +|+.+.+.+||+.+...   .   . 
T Consensus       139 ~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lGvilyemltG~~PF~~---~---~-  207 (320)
T d1xjda_         139 DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI-LLGQKYNHSVDWWS---FGVLLYEMLIGQSPFHG---Q---D-  207 (320)
T ss_dssp             TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH-HTTCCBCTHHHHHH---HHHHHHHHHHSSCSSCC---S---S-
T ss_pred             CCceeccccchhhhcccccccccccCCCCCcCCHHH-HcCCCCCchhhhhh---hhHHHHHHHhCCCCCCC---C---C-
Confidence            56899999999985            8899999998 44455678999999   88888899999877532   1   1 


Q ss_pred             hhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHH-HHH
Q 041157           70 VYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMS-SVV  124 (169)
Q Consensus        70 v~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~-~V~  124 (169)
                      ..........+.      +.+....+    ..+..+...|++.+|.+||++. ++.
T Consensus       208 ~~~~~~~i~~~~------~~~p~~~s----~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         208 EEELFHSIRMDN------PFYPRWLE----KEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHHHCC------CCCCTTSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHHcCC------CCCCccCC----HHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            111121211111      11111112    2356778899999999999995 664

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.8e-11  Score=89.99  Aligned_cols=54  Identities=9%  Similarity=-0.116  Sum_probs=44.8

Q ss_pred             cccceeeeeEeecC---------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +..+||+|||+++.               ||..|+|||........+.++|+|+   +|+.+++.++|+.+.
T Consensus       145 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwS---lG~il~eml~g~~pf  213 (345)
T d1pmea_         145 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS---VGCILAEMLSNRPIF  213 (345)
T ss_dssp             TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHH---HHHHHHHHHHSSCSC
T ss_pred             CCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhc---cCceehHHhhCCCCC
Confidence            56889999999874               7889999998444555678899999   888899999998764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.8e-12  Score=94.65  Aligned_cols=107  Identities=6%  Similarity=-0.092  Sum_probs=69.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchh
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPV   70 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv   70 (169)
                      +...||+|||+++.           ||..|+|||. ......+.++|+|+   +|+.+.+.++|..+....-      ..
T Consensus       140 ~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~-~~~~~~~~~~DiWS---lGvily~ll~G~~Pf~~~~------~~  209 (321)
T d1tkia_         140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVSTATDMWS---LGTLVYVLLSGINPFLAET------NQ  209 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHH-HTTCEECHHHHHHH---HHHHHHHHHHSSCTTCCSS------HH
T ss_pred             ceEEEEcccchhhccccCCcccccccccccccchh-ccCCCCCchhhccc---HHHHHHHHHhCCCCCCCCC------HH
Confidence            35789999999885           7899999998 44555678999999   8888889999987753211      11


Q ss_pred             hhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           71 YKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        71 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ....... .+..  ..+.......+    ..+.++...|++.+|.+||++.|+++
T Consensus       210 ~~~~~i~-~~~~--~~~~~~~~~~s----~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         210 QIIENIM-NAEY--TFDEEAFKEIS----IEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHH-HTCC--CCCHHHHTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHH-hCCC--CCChhhccCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111111 1110  01111101111    23567888999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.9e-11  Score=87.50  Aligned_cols=108  Identities=11%  Similarity=-0.022  Sum_probs=68.1

Q ss_pred             cccceeeeeEeecC-------------CCCCCCCCCccccc-ccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCc
Q 041157            2 NAKQKVLQFLRSGE-------------GRTGDDDEGYSYNI-LRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGF   67 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-------------gt~~y~ape~~~~~-~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~   67 (169)
                      +..+||+|||+++.             |+..|++||...+. ...+.++|+||   +|+.+.+.+||..+.......   
T Consensus       165 ~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWS---lG~iLyelltG~~PF~~~~~~---  238 (322)
T d1vzoa_         165 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS---LGVLMYELLTGASPFTVDGEK---  238 (322)
T ss_dssp             TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHH---HHHHHHHHHHSSCTTSCTTSC---
T ss_pred             CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHH---HHHHHHHHHhCCCCCCCCCHH---
Confidence            56899999999974             88999999983322 24567899999   888899999999775332111   


Q ss_pred             chhhhhHHhhhCCCeeeeccccccccccHHHHHHHHHHhhhhcCCCCCCCCC-----HHHHHH
Q 041157           68 GPVYKTWKLWCEGNVQELMDPVLKESFILEEILKRIHIGLLCVQEDPADRPT-----MSSVVV  125 (169)
Q Consensus        68 ~lv~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ia~~C~~~~p~~RP~-----m~~V~~  125 (169)
                      .............      .+.+....+    ..+..+...|++.+|.+||+     +.|+.+
T Consensus       239 ~~~~~i~~~~~~~------~~~~~~~~s----~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         239 NSQAEISRRILKS------EPPYPQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCHHHHHHHHHHC------CCCCCTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHHHHHhcccC------CCCCcccCC----HHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            1221111111111      011111122    34566778999999999995     567754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.94  E-value=3.4e-11  Score=88.76  Aligned_cols=55  Identities=5%  Similarity=-0.146  Sum_probs=44.1

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNE   59 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~   59 (169)
                      +...||+|||+|+.           ||..|+|||...+....+.++|+|+   +|+.+.+..+|+.+..
T Consensus       166 ~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws---lG~~l~e~~~g~~pf~  231 (328)
T d3bqca1         166 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS---LGCMLASMIFRKEPFF  231 (328)
T ss_dssp             TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHH---HHHHHHHHHHTCSSSS
T ss_pred             CCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhh---hhhhhHHhccCCCCCC
Confidence            34579999999974           7889999998444444578899999   8888889999987653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=1.9e-10  Score=85.64  Aligned_cols=118  Identities=13%  Similarity=-0.042  Sum_probs=70.8

Q ss_pred             cceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcchhhhhH
Q 041157            4 KQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKTW   74 (169)
Q Consensus         4 ~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~lv~~~~   74 (169)
                      ..|++|||.++.         ||..|+|||. ......+.++|+|+   +|+.+++.++|+.+.....+...........
T Consensus       170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DiwS---lG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQTREYRSPEV-LLGAPWGCGADIWS---TACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHH-HHTCCCCTHHHHHH---HHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeeEeecccccccccccccccccccccChhh-ccccCCCccccccc---hHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            479999999875         8899999998 43455578999999   8888999999987753322211111100000


Q ss_pred             H---hh------------------hCCCeeeeccc----c----c--cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHH
Q 041157           75 K---LW------------------CEGNVQELMDP----V----L--KESFILEEILKRIHIGLLCVQEDPADRPTMSSV  123 (169)
Q Consensus        75 ~---~~------------------~~~~~~~~~d~----~----l--~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V  123 (169)
                      .   .+                  .......-+..    .    +  ...........+.++..+|++.||.+|||+.|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            0   00                  00000000000    0    0  011233455678889999999999999999999


Q ss_pred             HH
Q 041157          124 VV  125 (169)
Q Consensus       124 ~~  125 (169)
                      ++
T Consensus       326 L~  327 (362)
T d1q8ya_         326 VN  327 (362)
T ss_dssp             HT
T ss_pred             hc
Confidence            76

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.5e-11  Score=89.13  Aligned_cols=119  Identities=8%  Similarity=-0.044  Sum_probs=69.1

Q ss_pred             cccceeeeeEeecC------------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCCCCCCCCCCcch
Q 041157            2 NAKQKVLQFLRSGE------------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGP   69 (169)
Q Consensus         2 ~~~~Ki~dFgls~~------------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~~~~~~~~~~~l   69 (169)
                      +..+||+|||.++.            ++..|+|||........+.++|+||   +|+.+.+.++|+++...  +......
T Consensus       137 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwS---lG~il~ell~g~~p~~~--~~~~~~~  211 (292)
T d1unla_         137 NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS---AGCIFAELANAGRPLFP--GNDVDDQ  211 (292)
T ss_dssp             TCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHH---HHHHHHHHTTTSCCSCC--CSSHHHH
T ss_pred             CCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccc---cchHHHHHhhCCCCCCC--CCCHHHH
Confidence            45789999999985            5677888887444445678999999   88889999999887532  1111111


Q ss_pred             hhhhHHhhhCC---C---eeee--------ccccc-cccccHHHHHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 041157           70 VYKTWKLWCEG---N---VQEL--------MDPVL-KESFILEEILKRIHIGLLCVQEDPADRPTMSSVVV  125 (169)
Q Consensus        70 v~~~~~~~~~~---~---~~~~--------~d~~l-~~~~~~~~~~~~~~ia~~C~~~~p~~RP~m~~V~~  125 (169)
                      ...+.......   .   ..+.        ..... ........-..+.++..+|++.+|.+|||+.||++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111000   0   0000        00000 00000111123556777899999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=6e-10  Score=82.94  Aligned_cols=53  Identities=8%  Similarity=-0.108  Sum_probs=40.9

Q ss_pred             cccceeeeeEeecC-----------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE-----------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~-----------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +...|++|||+++.           ||..|+|||... ....+.++|+|+   +|+.+++.++|+.+.
T Consensus       155 ~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~-~~~~~~~~DiwS---lG~~l~ell~g~~pF  218 (355)
T d2b1pa1         155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWS---VGCIMGEMVRHKILF  218 (355)
T ss_dssp             TCCEEECCCCC---------------CCTTCCHHHHT-TCCCCTTHHHHH---HHHHHHHHHHSSCSS
T ss_pred             ccceeeechhhhhccccccccccccccccccChhhhc-CCCCCCCccccc---ccchHHHHhhCCCCC
Confidence            45689999998886           899999999943 456678899999   888899999998764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=6.3e-10  Score=82.40  Aligned_cols=54  Identities=13%  Similarity=-0.008  Sum_probs=41.3

Q ss_pred             cccceeeeeEeecC---------CCCCCCCCCcccccccCCccccCCCCCCcCHHHHHHHHhCCCC
Q 041157            2 NAKQKVLQFLRSGE---------GRTGDDDEGYSYNILRGNKKVESQELPLFPLDLIHEATRNFSN   58 (169)
Q Consensus         2 ~~~~Ki~dFgls~~---------gt~~y~ape~~~~~~~~~~~~dv~s~~~~~~~ll~~~t~~~~~   58 (169)
                      +...|++|||++..         |+..|+|||...+....+.++|+|+   +|+.+.+.++|..+.
T Consensus       157 ~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwS---lGv~l~~ll~g~~pF  219 (348)
T d2gfsa1         157 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS---VGCIMAELLTGRTLF  219 (348)
T ss_dssp             TCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHH---HHHHHHHHHHSSCSC
T ss_pred             cccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhh---hhHHHHHHHhCCCCC
Confidence            56789999999876         6788999997555556678999999   888888999998764