BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041158
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Query: 14 HGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDND-LKRGDEISQSLLDTIEASTISII 72
+ +FLSFRGEDTR FTSHLY L I+TF D+ L+ G I L IE S +I+
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 73 IFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPSHVRWQ 117
+FSE YA+S WCL+EL+KI+ECK + Q VIP+F VDPSHVR Q
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQ 116
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 1 MASSSSSPRNSNKHGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSL 60
MASSSS NS ++ +F SFRGED R+NF SHL I TF D+ +KR I L
Sbjct: 1 MASSSS---NSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHEL 57
Query: 61 LDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPSHVRWQT 118
I S IS+++FSE YASS WCLDEL++I++CK G V+PVF +VDPS +R QT
Sbjct: 58 RAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQT 115
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%), Gaps = 5/118 (4%)
Query: 1 MASSSSSPRNSNKHGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSL 60
+ASSS S R + +F SFRGED RD+F SHL L I TFID++++R I L
Sbjct: 3 IASSSGSRR----YDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPEL 57
Query: 61 LDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPSHVRWQT 118
L I+ S I+I+IFS+ YASS WCL+EL++I +C Q+VIP+F VD S V+ QT
Sbjct: 58 LSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQT 115
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 1 MASSSSSPRNSNKHGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSL 60
MA+SSS +F++FRG+D R+ F S L A+ NI FID D G ++ +L
Sbjct: 1 MAASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLV-NL 59
Query: 61 LDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPSHV 114
I+ S ++++IFS+ Y SS WCLDEL +I +C + G IP+F ++ PS V
Sbjct: 60 FVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSV 113
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 16 IFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSLLDTIEASTISIIIFS 75
+F++FRG+D R F S L AL I FID +RG + SL DTI S I+++IFS
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIGESKIALVIFS 82
Query: 76 ERYASSGWCLDELLKILECKHVYGQIVIPVFCRVD 110
E Y S WC+DEL+KI E I+IP+F R+D
Sbjct: 83 EGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLD 117
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 1 MASSSS--SPRNSNKHGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQ 58
MASSSS P + +F+ FRG D R +F S L AL NI FID + G E++
Sbjct: 1 MASSSSVVKPTPTGPQ-VFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA- 58
Query: 59 SLLDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPSHVRW 116
+LL IE S ++++IFS + S CL+EL KI E K IVIP+F +V PS V++
Sbjct: 59 NLLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKF 116
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 5 SSSPRNSNKHGI-------FLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEIS 57
S++ +++ HGI F++FRG++ R++F L A+ I F D RG ++
Sbjct: 342 SNAASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN 401
Query: 58 QSLLDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIVIPVFCRVDPS 112
L IE S +++ IFSERY S WCLDEL+K+ E +V+PVF R++ +
Sbjct: 402 Y-LFRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNAT 455
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 23 EDTRDNFTSHLYSALCHNNI-ETFIDNDLKRGDEISQSLLDTIEASTISIIIFSERYASS 81
E+ R +F SHL AL + + FID+D D +S +E + +S++I S
Sbjct: 14 EEVRYSFVSHLSKALQRKGVNDVFIDSD----DSLSNESQSMVERARVSVMILPGNRTVS 69
Query: 82 GWCLDELLKILECKHVYGQIVIPVFCRVDPSHVRW 116
LD+L+K+L+C+ Q+V+PV V S W
Sbjct: 70 ---LDKLVKVLDCQKNKDQVVVPVLYGVRSSETEW 101
>sp|P55546|Y4LF_RHISN Uncharacterized protein y4lF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02690 PE=4 SV=1
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 16 IFLSFRGEDT--RDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSLLDTIEASTISIII 73
+F S+ D RD L IET+ D + G++I +++ D I I +++
Sbjct: 4 VFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILLL 63
Query: 74 FSERYASSGWCLD-ELLKILECKHVYGQIVIPVFCRV 109
S + +S +C D E+ + +E H IVIP+ R
Sbjct: 64 VSADFIASDYCYDIEMQRAMERHHSGEAIVIPIILRA 100
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 21 RGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSLLDTIEASTISIIIFSERYAS 80
R + + ++F SHL ++LC I + ++ +E+ D + + II+ + Y
Sbjct: 676 RADISNEDFISHLRASLCRRGISVY-----EKFNEV-----DALPKCRVLIIVLTSTYVP 725
Query: 81 SGWCLDELLKILECKHVYGQIVIPVFCRVDP 111
S LL ILE +H ++V P+F R+ P
Sbjct: 726 S-----NLLNILEHQHTEDRVVYPIFYRLSP 751
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 23 EDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSLLDTIEASTISIIIFSERYASSG 82
ED + L L + NI FID + RG + ++L I+ S IS+ IFSE S
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGL-KNLFKRIQDSKISLAIFSE----SK 105
Query: 83 WCLDELLKILECKHVYGQIVIPVFCRVDPS 112
++LLK E IP+F +VD +
Sbjct: 106 CDFNDLLKNNES----ADEAIPIFYKVDAT 131
>sp|A6LKB8|RPOB_THEM4 DNA-directed RNA polymerase subunit beta OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=rpoB PE=3
SV=1
Length = 1172
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Query: 51 KRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIV------IP 104
KRGD I+Q L++ +E S I I + RYA ++ L K+ HVYG+ + I
Sbjct: 251 KRGDVITQGLIEKLENSDIQKIKVAHRYA-----VNTLEKL---NHVYGENIEENRAYIE 302
Query: 105 VFCRVDPSHV 114
+F ++ P +
Sbjct: 303 IFRKLRPGEL 312
>sp|O04534|LRK51_ARATH Putative L-type lectin-domain containing receptor kinase V.1
OS=Arabidopsis thaliana GN=LECRK51 PE=3 SV=1
Length = 666
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 13 KHGIFLSFRGEDTRDNFTSHL-----YSALCHNNIETFIDNDLKRGDEISQSLLDTIEAS 67
K G+F S R N +S + + L HN ++ ++ RG EIS D+ E+
Sbjct: 591 KLGLFCSHPVAAIRPNMSSVIQLLDSVAQLPHNLLDIVQTREVHRGTEISGEAADSPESC 650
Query: 68 TISIIIFSERYASSG 82
+I+ + F+E + S G
Sbjct: 651 SIAPLTFTESFVSHG 665
>sp|Q86DA5|SARM1_CAEEL Sterile alpha and TIR motif-containing protein tir-1
OS=Caenorhabditis elegans GN=tir-1 PE=1 SV=1
Length = 1000
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 11 SNKHGIFLSFRGEDTRDNFTSHLYSALCHNNIETFIDNDLKRGDEISQSLLDTIEASTIS 70
S + +F+S+R T + S + L FID D + SLL I+A+
Sbjct: 759 SKQIDVFISYR-RSTGNQLASLIKVLLQLRGYRVFIDVDKLYAGKFDSSLLKNIQAAKHF 817
Query: 71 IIIFS----ERYASSGWCLDELLKILECKHVYGQIVIPVF 106
I++ + +R + C D + K L+C + + +IP+F
Sbjct: 818 ILVLTPNSLDRLLNDDNCEDWVHKELKCAFEHQKNIIPIF 857
>sp|O61460|VAB1_CAEEL Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1
Length = 1122
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 57 SQSLLDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIV 102
SQS L+T + + ++ A+ LD+ L+ + HVYGQ+V
Sbjct: 1007 SQSALNTYGSVNVGVVPTPPSSAAPMPSLDDFLRQIGLNHVYGQLV 1052
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFVPGKWIIDNIIDSIEKSRKTIFVLSENFVRSEWCKYEL 717
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFVPGKWIIDNIIDSIEKSRKTIFVLSENFVRSEWCKYEL 717
>sp|Q689D1|TLR2_CANFA Toll-like receptor 2 OS=Canis familiaris GN=TLR2 PE=2 SV=1
Length = 785
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 679 DFIPGKWIIDNIIDSIEKSRKTIFVLSENFVKSEWCKYEL 718
>sp|B7ICR3|RPOB_THEAB DNA-directed RNA polymerase subunit beta OS=Thermosipho africanus
(strain TCF52B) GN=rpoB PE=3 SV=1
Length = 1172
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
Query: 51 KRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDELLKILECKHVYGQIV------IP 104
KRGD I+Q L++ + S I I + RYA ++ L K+ KH YG V I
Sbjct: 251 KRGDVITQGLIEKLANSEIEKIKVAHRYA-----VNTLEKL---KHTYGDDVEENRAYIE 302
Query: 105 VFCRVDPSHV 114
+F ++ P +
Sbjct: 303 IFRKLRPGEL 312
>sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFVPGKWIIDNIIDSIEKSRKTIFVLSESFVRSEWCKYEL 717
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q95LA9|TLR2_BOVIN Toll-like receptor 2 OS=Bos taurus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|B5T267|TLR2_BOSIN Toll-like receptor 2 OS=Bos indicus GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|B2LT64|TLR2_GIRCA Toll-like receptor 2 OS=Giraffa camelopardalis GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q6T752|TLR2_HORSE Toll-like receptor 2 OS=Equus caballus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|B2LT61|TLR2_BISBI Toll-like receptor 2 OS=Bison bison GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S +I + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYEL 717
>sp|Q9DGB6|TLR22_CHICK Toll-like receptor 2 type-2 OS=Gallus gallus GN=TLR2-2 PE=2 SV=1
Length = 781
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 675 DFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYEL 714
>sp|C4K4F1|RPOB_HAMD5 DNA-directed RNA polymerase subunit beta OS=Hamiltonella defensa
subsp. Acyrthosiphon pisum (strain 5AT) GN=rpoB PE=3
SV=1
Length = 1341
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 39 HNNIETFIDNDLKRGDEISQSL 60
H IET NDL GD ISQ+L
Sbjct: 330 HQQIETIFTNDLDHGDYISQTL 351
>sp|Q9DD78|TLR21_CHICK Toll-like receptor 2 type-1 OS=Gallus gallus GN=TLR2-1 PE=2 SV=1
Length = 793
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 687 DFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYEL 726
>sp|B3Y618|TLR2_MACMU Toll-like receptor 2 OS=Macaca mulatta GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q95M53|TLR2_MACFA Toll-like receptor 2 OS=Macaca fascicularis GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|O60603|TLR2_HUMAN Toll-like receptor 2 OS=Homo sapiens GN=TLR2 PE=1 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|B3Y615|TLR2_GORGO Toll-like receptor 2 OS=Gorilla gorilla gorilla GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|B3Y613|TLR2_PANTR Toll-like receptor 2 OS=Pan troglodytes GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q9QUN7|TLR2_MOUSE Toll-like receptor 2 OS=Mus musculus GN=Tlr2 PE=1 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYEL 717
>sp|B3Y614|TLR2_PANPA Toll-like receptor 2 OS=Pan paniscus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 28 NFTSHLYSALCHNNIETFIDN---DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWC 84
+ SHL +AL I F+D + I Q+ T A + ++I E W
Sbjct: 31 SLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDGARVLVVVISDEVEFYDPW- 89
Query: 85 LDELLKILECKHVYGQIVIPVFCRVD 110
+ LK+++ G +V+PVF VD
Sbjct: 90 FPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|O71152|VNS3_DSDNV Non-structural protein NS3 OS=Diatraea saccharalis densovirus
GN=NS3 PE=4 SV=1
Length = 202
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 19 SFRGEDTRDNFTSHL-YSALCHNNIETFIDNDLKRGDEISQSLLDTIEA 66
+F +D ++ F H Y +CHN F+D+ L+ I +++++ I+
Sbjct: 121 TFEFDDFQEKFIEHKHYEKICHNCFNRFLDHALQEMSTIEKTIINYIKP 169
>sp|Q9R1F8|TLR2_CRIGR Toll-like receptor 2 OS=Cricetulus griseus GN=TLR2 PE=2 SV=2
Length = 784
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 49 DLKRGDEISQSLLDTIEASTISIIIFSERYASSGWCLDEL 88
D G I +++D+IE S ++ + SE + S WC EL
Sbjct: 678 DFVPGKWIIDNIIDSIEKSHKTLFVLSENFVRSEWCKYEL 717
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,411,140
Number of Sequences: 539616
Number of extensions: 1488966
Number of successful extensions: 3621
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3575
Number of HSP's gapped (non-prelim): 49
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)