BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041160
(182 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 95 PIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFI 154
P I+DFYA WCGPC ++A +E L+ EY I KV+ D E E ARD ++G+PT++F+
Sbjct: 53 PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTIWFV 112
Query: 155 ----SPDPNKDAIRTEGL 168
P N A+ E L
Sbjct: 113 PMKGEPQVNMGALSKEQL 130
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 95 PIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFI 154
P I+DFYA WCGPC ++A +E L+ EY I KV+ D E E ARD ++ +PT++F+
Sbjct: 53 PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFV 112
Query: 155 ----SPDPNKDAIRTEGL 168
P N A+ E L
Sbjct: 113 PMKGEPQVNMGALSKEQL 130
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 70 VREDYLVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIV 129
+ ++L K ++ E + E + P I+DFYA WCGPC ++A ++ LA EY+ +I
Sbjct: 15 TKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIY 74
Query: 130 KVDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
KVDT+ E E A +R +P++ FI P K + +G +P + ID
Sbjct: 75 KVDTEKEQELAGAFGIRSIPSILFI-PMEGKPEM-AQGAMPKASFKKAID 122
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 91 ERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
E VP+++DF+A WCGPC L+A I+ LA EY + K++TD+ A +R +PT
Sbjct: 15 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 74
Query: 151 LFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+ F K++I G +P + D I+
Sbjct: 75 VLFFKNGERKESII--GAVPKSTLTDSIE 101
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 91 ERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
E VP+++DF+A WCGPC L+A I+ LA EY + K++TD+ A +R +PT
Sbjct: 16 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75
Query: 151 LFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+ F K++I G +P + D I+
Sbjct: 76 VLFFKNGERKESII--GAVPKSTLTDSIE 102
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 93 NVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL- 151
N P+++DF+ATWCGPC ++A +E +A E + + K+D D E AR+ QV +PTL
Sbjct: 25 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 84
Query: 152 FFISPDPNKDAIRTEGLIP-IQMMRDIIDN 180
F P K + +G ++ + D++ N
Sbjct: 85 LFKDGQPVKRIVGAKGKAALLRELSDVVPN 114
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 93 NVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL- 151
N P+++DF+ATWCGPC ++A +E +A E + + K+D D E AR+ QV +PTL
Sbjct: 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89
Query: 152 FFISPDPNKDAIRTEGLIP-IQMMRDIIDN 180
F P K + +G ++ + D++ N
Sbjct: 90 LFKDGQPVKRIVGAKGKAALLRELSDVVPN 119
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 91 ERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
E VP+++DF+A WCGP L+A I+ LA EY + K++TD+ A +R +PT
Sbjct: 16 ESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75
Query: 151 LFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+ F K++I G +P + D I+
Sbjct: 76 VLFFKNGERKESII--GAVPKSTLTDSIE 102
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 93 NVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL- 151
N P+++DF+ATWCGP ++A +E +A E + + K+D D E AR+ QV +PTL
Sbjct: 27 NKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 86
Query: 152 FFISPDPNKDAIRTEGLIP-IQMMRDIIDN 180
F P K + +G ++ + D++ N
Sbjct: 87 LFKDGQPVKRIVGAKGKAALLRELSDVVPN 116
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 79 KTAQEI-QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEY 137
K+A E L G++ V ++DF+ATWCGPC ++A IE A +Y S A K+D D+
Sbjct: 6 KSASEYDSALASGDKLV--VVDFFATWCGPCKMIAPMIEKFAEQY-SDAAFYKLDVDEVS 62
Query: 138 EFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
+ A+ +V +PTL F K+ R G P + + I N
Sbjct: 63 DVAQKAEVSSMPTLIFYK--GGKEVTRVVGANPAAIKQAIASN 103
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 79 KTAQEI-QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEY 137
K+A E L G++ V ++DF+ATWCGPC ++A IE A +Y S A K+D D+
Sbjct: 13 KSASEYDSALASGDKLV--VVDFFATWCGPCKMIAPMIEKFAEQY-SDAAFYKLDVDEVS 69
Query: 138 EFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
+ A+ +V +PTL F K+ R G P + + I N
Sbjct: 70 DVAQKAEVSSMPTLIFYK--GGKEVTRVVGANPAAIKQAIASN 110
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DF+ATWCGPC ++A +E LA +YE A I+K+D D+ A +V +PTL
Sbjct: 24 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 157 DPNKDAIRTEGLIPIQMMRDIIDNEM 182
D + G P + + +++D +
Sbjct: 84 GQPVD--KVVGFQPKENLAEVLDKHL 107
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 91 ERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
E +VP+++DF+A WCGPC ++A ++ +A EY+ VK++TD+ A + +R +PT
Sbjct: 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPT 76
Query: 151 LF 152
+
Sbjct: 77 IM 78
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 93 NVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLF 152
N ++IDFYATWCGPC ++A ++E L+ + S + +KVD D+ + A+D Q+ +PT
Sbjct: 20 NKLVVIDFYATWCGPCKMIAPKLEELS-QSMSDVVFLKVDVDECEDIAQDNQIACMPTFL 78
Query: 153 FISPDPNKDAI 163
F+ D++
Sbjct: 79 FMKNGQKLDSL 89
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 75 LVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD 134
L++ K +++ L+ +N +++DF+ATWCGPC +A + L+ +Y+ A+ VKVD D
Sbjct: 6 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYD--AIFVKVDVD 63
Query: 135 DEYEFARDMQVRGLPTLFFI 154
E AR + +PT I
Sbjct: 64 KLEETARKYNISAMPTFIAI 83
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 75 LVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD 134
L++ K +++ L+ +N +++DF+ATWCGPC +A + L+ +Y+ A+ VKVD D
Sbjct: 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYD--AIFVKVDVD 72
Query: 135 DEYEFARDMQVRGLPTLFFI 154
E AR + +PT I
Sbjct: 73 KLEETARKYNISAMPTFIAI 92
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 79 KTAQEI-QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEY 137
K+A E L G++ V ++DF+ATWCGP ++A IE A +Y S A K+D D+
Sbjct: 6 KSASEYDSALASGDKLV--VVDFFATWCGPSKMIAPMIEKFAEQY-SDAAFYKLDVDEVS 62
Query: 138 EFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
+ A+ +V +PTL F K+ R G P + + I N
Sbjct: 63 DVAQKAEVSSMPTLIFYK--GGKEVTRVVGANPAAIKQAIASN 103
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 79 KTAQEI-QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEY 137
K+A E L G++ V ++DF+ATWCGP ++A IE A +Y S A K+D D+
Sbjct: 14 KSASEYDSALASGDKLV--VVDFFATWCGPSKMIAPMIEKFAEQY-SDAAFYKLDVDEVS 70
Query: 138 EFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
+ A+ +V +PTL F K+ R G P + + I N
Sbjct: 71 DVAQKAEVSSMPTLIFYK--GGKEVTRVVGANPAAIKQAIASN 111
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DF+ATWCG C ++A +E LA +YE A I+K+D D+ A +V +PTL
Sbjct: 23 LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 157 DPNKDAIRTEGLIPIQMMRDIIDNEM 182
D + G P + + +++D +
Sbjct: 83 GQPVD--KVVGFQPKENLAEVLDKHL 106
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 85 QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQ 144
QE+++ ++ P+++DF+A WCGPC ++A IE LA EYE +VKV+ D+ A
Sbjct: 13 QEVLKSDK--PVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYG 70
Query: 145 VRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDNEM 182
+R +PTL D R G P + +++ ID +
Sbjct: 71 IRSIPTLLLFKNGQVVD--RLVGAQPKEALKERIDKHL 106
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DF+ATWCG C ++A +E LA +YE A I+K+D D+ A +V +PTL
Sbjct: 24 LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 157 DPNKDAIRTEGLIPIQMMRDIIDNEM 182
D + G P + + +++D +
Sbjct: 84 GQPVD--KVVGFQPKENLAEVLDKHL 107
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
TA ++++L+ + I++DF+A WCGPC +A ++E LA E KVD D E
Sbjct: 6 TAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEI-PEVEFAKVDVDQNEEA 64
Query: 140 ARDMQVRGLPTLFFI 154
A V +PT FI
Sbjct: 65 AAKYSVTAMPTFVFI 79
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 95 PIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLF 152
P+++DF+A WCGPC ++ +E + + ++ KVD DD + A + +V +PT+
Sbjct: 33 PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVL 90
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 87 LVRGERN-VPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQV 145
L R ER+ +P+++DF+A WCGPC MA + + A + K+DT A ++
Sbjct: 57 LARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRI 116
Query: 146 RGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDNEM 182
+G+P FI ++ R G P + + ++
Sbjct: 117 QGIPA--FILFHKGRELARAAGARPASELVGFVRGKL 151
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 86 ELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQV 145
E+++ E+ P+++ F+A+WCGPC LM+ I L A Y +VK++ D + +V
Sbjct: 20 EVLKAEQ--PVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKV 77
Query: 146 RGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDNEM 182
G+P L + + D+ TEG+I + +D +
Sbjct: 78 EGVPALRLVKGEQILDS--TEGVISKDKLLSFLDTHL 112
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE 138
KTA E + ++ V ++DFYATWCGPC ++A IE + +Y A K+D D+ +
Sbjct: 6 KTASEFDSAIAQDKLV--VVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGD 62
Query: 139 FARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
A+ +V +PTL K+ + G P + + I N
Sbjct: 63 VAQKNEVSAMPTLLLFK--NGKEVAKVVGANPAAIKQAIAAN 102
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE 138
KTA E + ++ V ++DFYATWCGPC ++A IE + +Y A K+D D+ +
Sbjct: 12 KTASEFDSAIAQDKLV--VVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGD 68
Query: 139 FARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
A+ +V +PTL K+ + G P + + I N
Sbjct: 69 VAQKNEVSAMPTLLLFK--NGKEVAKVVGANPAAIKQAIAAN 108
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+++DF+ATWCGPC +++ ++ L+ ++ + +++KVD D+ + A + + +PT F+
Sbjct: 23 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL- 81
Query: 156 PDPNKDAIRTE 166
K+ ++ E
Sbjct: 82 ----KNGVKVE 88
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+++DF+ATWCGPC +++ ++ L+ ++ + +++KVD D+ + A + + +PT F+
Sbjct: 28 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL- 86
Query: 156 PDPNKDAIRTE 166
K+ ++ E
Sbjct: 87 ----KNGVKVE 93
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T Q+ ++G++ P+++DF+A WCGPC +MA +E A + + K++ D+ E
Sbjct: 6 TDANFQQAIQGDK--PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 140 ARDMQVRGLPTL-FFISPDPNKDAI 163
+ +PTL F +P K I
Sbjct: 64 TSQFGIMSIPTLILFKGGEPVKQLI 88
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 85 QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQ 144
Q++++ ++ P+++DF+A WCGPC +A +E +A EY IVK++ D+ A
Sbjct: 17 QDVLKNDK--PVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYG 74
Query: 145 VRGLPTL 151
V +PTL
Sbjct: 75 VMSIPTL 81
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DF+AT CGPC ++A +E LA +YE A I+K+D D+ A +V +PTL
Sbjct: 23 LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 157 DPNKDAIRTEGLIPIQMMRDIIDNEM 182
D + G P + + +++D +
Sbjct: 83 GQPVD--KVVGFQPKENLAEVLDKHL 106
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFI 154
+++DF+A WCGPC ++ + + E+ + KV+ DD E QVR +PTL +
Sbjct: 23 VLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC L+A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A +E +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T Q+ ++G++ P+++DF+A WCGPC +MA +E A + + K++ D+ E
Sbjct: 6 TDANFQQAIQGDK--PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 140 ARDMQVRGLPTLFF 153
+ +PTL
Sbjct: 64 TSQFGIMSIPTLIL 77
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFF 153
+ A +RG+PTL
Sbjct: 62 AQDVAPKYGIRGIPTLLL 79
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 156 PDPNKDAIRTE-GLIPIQMMRDIIDNEM 182
N D T+ G + +++ +D +
Sbjct: 83 ---NGDVAATKVGALSKGQLKEFLDANL 107
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T Q+ ++G+ P+++DF+A WCGPC +MA +E A + + K++ D+ E
Sbjct: 6 TDANFQQAIQGDG--PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 140 ARDMQVRGLPTL-FFISPDPNKDAI 163
+ +PTL F +P K I
Sbjct: 64 TSQFGIMSIPTLILFKGGEPVKQLI 88
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+++DF+A WC PC +A +E +A EYE ++ K+D D+ + A +V +PT+
Sbjct: 22 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF- 80
Query: 156 PDPNKDAIRTEGLIPIQMMRD 176
KD E L+ Q R+
Sbjct: 81 ----KDGQPVEVLVGAQPKRN 97
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+++DF+A WC PC +A +E +A EYE ++ K+D D+ + A +V +PT+
Sbjct: 21 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF- 79
Query: 156 PDPNKDAIRTEGLIPIQMMRD 176
KD E L+ Q R+
Sbjct: 80 ----KDGQPVEVLVGAQPKRN 96
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DF+ATWCG ++A +E LA +YE A I+K+D D+ A +V +PTL
Sbjct: 24 LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 157 DPNKDAIRTEGLIPIQMMRDIIDNEM 182
D + G P + + +++D +
Sbjct: 84 GQPVD--KVVGFQPKENLAEVLDKHL 107
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 62 CKPPQGKYVREDYLVKKKTAQEIQELVRGERNVPI-IIDFYATWCGPCILMAQEIELLAV 120
CK P V D +K AQE+ P+ ++DF+A WCGPC L++ +E LA
Sbjct: 28 CKTPLPWVVEAD---EKGFAQEVA-------GAPLTLVDFFAPWCGPCRLVSPILEELAR 77
Query: 121 EYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
++ +VKV+ D+ A VR +PTL
Sbjct: 78 DHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVL 110
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T Q+ ++G+ P+++DF+A WCGPC +MA +E A + + K++ D+ E
Sbjct: 6 TDANFQQAIQGDG--PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 140 ARDMQVRGLPTLFF 153
+ +PTL
Sbjct: 64 TSQFGIMSIPTLIL 77
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+++DF+ATWCGPC + Q + +A E +KVD D A V +P LFF+
Sbjct: 26 VLVDFFATWCGPCQRLGQILPSIA-EANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVK 84
Query: 156 PDPNK 160
+ N+
Sbjct: 85 KEGNE 89
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 75 LVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD 134
+ K E + L++ +N ++IDFYATWCGPC +M + L Y VK D D
Sbjct: 14 ITKLTNLTEFRNLIK--QNDKLVIDFYATWCGPCKMMQPHLTKLIQAY-PDVRFVKCDVD 70
Query: 135 DEYEFARDMQVRGLPTLFFISPD 157
+ + A++ +V +PT F + D
Sbjct: 71 ESPDIAKECEVTAMPT-FVLGKD 92
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 33 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 90
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ PT F
Sbjct: 62 AQDVASEAEVKATPTFQFF 80
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +RG PTL
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGTPTLLL 81
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
++ DF+A WCGPC ++A +E L E IVK+D D+ E A V +PTL +
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 156 PDPNKDAIRTE-GLIPIQMMRDIIDNEM 182
+ + + T G P + ++++++ +
Sbjct: 80 ---DGEVVETSVGFKPKEALQELVNKHL 104
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASECEVKSMPTFQFF 80
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
++IDF A+WCGPC +MA LA ++ +A+ +KVD D+ A V +PT F+
Sbjct: 37 VVIDFTASWCGPCRIMAPVFADLAKKF-PNAVFLKVDVDELKPIAEQFSVEAMPTFLFMK 95
Query: 156 PDPNKDAIRTEGLI 169
KD R G I
Sbjct: 96 EGDVKD--RVVGAI 107
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASESEVKSMPTFQFF 80
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 73 DYLVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVD 132
D V TA+ + +L+ + ++P +IDF+A WCGPC A A E VKV+
Sbjct: 37 DGEVINATAETLDKLL--QDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVN 94
Query: 133 TDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDNEM 182
T+ E + ++R +PT+ D + G +P + +D ++
Sbjct: 95 TEAEPALSTRFRIRSIPTIXLYRNGKXIDXL--NGAVPKAPFDNWLDEQL 142
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A +Y+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE 138
KTA E + ++ V ++DFYATWCGP ++A IE + +Y A K+D D+ +
Sbjct: 12 KTASEFDSAIAQDKLV--VVDFYATWCGPSKMIAPMIEKFSEQY-PQADFYKLDVDELGD 68
Query: 139 FARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIIDN 180
A+ +V +PTL K+ + G P + + I N
Sbjct: 69 VAQKNEVSAMPTLLLFK--NGKEVAKVVGANPAAIKQAIAAN 108
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 83 EIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLA-VEYESSAMIVKVDTDDEYEFAR 141
+ +++ G++ V +IDF+ATWCGPC ++ E ++ KVD D++ + A+
Sbjct: 25 QFKQVTGGDKVV--VIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQ 82
Query: 142 DMQVRGLPTLFF----------ISPDPNK 160
++ +R +PT F + DP+K
Sbjct: 83 EVGIRAMPTFVFFKNGQKIDTVVGADPSK 111
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASECEVKCMPTFQFF 80
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASEXEVKCMPTFQFF 80
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+IIDF A+WCGPC +A A ++ A+ +KVD D+ E A V +PT FI
Sbjct: 39 VIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVDELKEVAEKYNVEAMPTFLFIK 97
Query: 156 PDPNKDAI 163
D +
Sbjct: 98 DGAEADKV 105
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 92 RNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
+N I++ F+A WC C + + E++ L Y ++KVD D AR V+ LPT+
Sbjct: 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTI 100
Query: 152 FFI 154
+
Sbjct: 101 ILL 103
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A +R +PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRSIPTLLL 80
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ PT F
Sbjct: 62 CQDVASECEVKCTPTFQFF 80
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGP ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 43 ILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 100
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGPC ++A ++ +A EY+ + K++ D A RG+PTL
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYIERGIPTLLL 80
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 92 RNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
+N +++DF+A WC PC+++A IE LA +Y A K++T++ + A + LPT+
Sbjct: 22 KNKIVVVDFWAEWCAPCLILAPVIEELANDYPQVAF-GKLNTEESQDIAMRYGIMSLPTI 80
Query: 152 FF 153
F
Sbjct: 81 MF 82
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 75 LVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD 134
++ K A + Q E + PI++DF ATWCGPC ++A E L+ +Y + +KVD D
Sbjct: 6 VIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD 65
Query: 135 DEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLI 169
A + +PT KD ++ + L+
Sbjct: 66 AVAAVAEAAGITAMPTFHVY-----KDGVKADDLV 95
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGP ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 SQDVASESEVKSMPTFQFF 80
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD +D
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVND 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASECEVKCMPTFQFF 80
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCG C ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+IIDF A+WCGPC ++A A ++ A+ +KVD D+ + A V +PT FI
Sbjct: 31 VIIDFTASWCGPCRVIAPVFAEYAKKF-PGAIFLKVDVDELKDVAEAYNVEAMPTFLFIK 89
Query: 156 PDPNKDAI 163
D++
Sbjct: 90 DGEKVDSV 97
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCGP ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 91 ERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
E +++DF A+WCGPC +A LA + + + +KVDTD+ A D ++ +PT
Sbjct: 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDTDELKSVASDWAIQAMPT 94
Query: 151 LFFI 154
F+
Sbjct: 95 FMFL 98
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGP ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPAKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ PT F
Sbjct: 62 AQDVASEAEVKATPTFQFF 80
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 96 IIIDFYATWCG-PCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WCG PC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 81
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
++ DF+A WCGP ++A +E L E IVK+D D+ E A V +PTL +
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 156 PDPNKDAIRTE-GLIPIQMMRDIIDNEM 182
+ + + T G P + ++++++ +
Sbjct: 80 ---DGEVVETSVGFKPKEALQELVNKHL 104
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 87 LVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE-FARDMQV 145
+V+ + P+++D + WCGPC MA + E LA EY + +K+D + E + A+++ +
Sbjct: 19 IVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEY-LDVIFLKLDCNQENKTLAKELGI 77
Query: 146 RGLPTL 151
R +PT
Sbjct: 78 RVVPTF 83
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
++IDF A+WCGP +MA LA ++ +A+ +KVD D+ A V +PT F+
Sbjct: 40 VVIDFTASWCGPSRIMAPVFADLAKKF-PNAVFLKVDVDELKPIAEQFSVEAMPTFLFMK 98
Query: 156 PDPNKDAIRTEGLI 169
KD R G I
Sbjct: 99 EGDVKD--RVVGAI 110
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 87 LVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE-FARDMQV 145
+V+ + P+++D + WCGPC MA + E LA EY + +K+D + E + A+++ +
Sbjct: 31 IVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEY-LDVIFLKLDCNQENKTLAKELGI 89
Query: 146 RGLPTL 151
R +PT
Sbjct: 90 RVVPTF 95
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGP ++ L+ +Y S+ + ++VD DD
Sbjct: 16 IESKTA--FQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDD 72
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 73 CQDVASECEVKSMPTFQFF 91
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
++ DF+A WCGP ++A +E L E IVK+D D+ E A V +PTL +
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 156 PDPNKDAIRTE-GLIPIQMMRDIIDN 180
+ + + T G P + ++++++
Sbjct: 80 ---DGEVVETSVGFKPKEALQELVNK 102
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGP ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASECEVKRMPTFQFF 80
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 75 LVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD 134
++ K A + Q E + PI++ F ATWCGPC ++A E L+ +Y + +KVD D
Sbjct: 6 VIDSKAAWDAQLAKGKEEHKPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD 65
Query: 135 DEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLI 169
A + +PT KD ++ + L+
Sbjct: 66 AVAAVAEAAGITAMPTFHVY-----KDGVKADDLV 95
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSA---MIVKVDTDDEYEFARDMQVRGLPTLF 152
++++FYA WCG C +A E A + ++ + KVD +E + A+ VRG PT+
Sbjct: 27 LLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIK 86
Query: 153 FI 154
F
Sbjct: 87 FF 88
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSA---MIVKVDTDDEYEFARDMQVRGLPTL 151
I+++FYA WCG C +A E E A E + + KVD ++ + A+ V G PTL
Sbjct: 27 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTL 85
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
++DF+A WC PC+++A IE LA +Y K+++D+ + A V LPT+ F
Sbjct: 20 VVDFWAEWCAPCLILAPIIEELAEDYPQVGF-GKLNSDENPDIAARYGVMSLPTVIF 75
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 85 QELVRGERNVPIII-DFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDM 143
Q+L R+ I++ +F A WCGPC +A L+ Y S M + +D D+ +F+
Sbjct: 37 QKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENY-PSLMFLVIDVDELSDFSASW 95
Query: 144 QVRGLPTLFFI 154
+++ PT FF+
Sbjct: 96 EIKATPTFFFL 106
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSA---MIVKVDTDDEYEFARDMQVRGLPTL 151
I+++FYA WCG C +A E E A E + + KVD E + A+ V G PTL
Sbjct: 150 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 96 IIIDFYATWCGPCILMAQEIELLA---VEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
++++FYA WCG C A E E +A + + + K+D A V G PT+
Sbjct: 35 VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTI 93
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WC C ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 87 LVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE-FARDMQV 145
+V+ + P+++D + WCGP MA + E LA EY + +K+D + E + A+++ +
Sbjct: 18 IVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEY-LDVIFLKLDCNQENKTLAKELGI 76
Query: 146 RGLPTL 151
R +PT
Sbjct: 77 RVVPTF 82
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DFYA WCGPC A E ELLA + KVD + + ++ P++
Sbjct: 25 VVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQY 84
Query: 157 DPNKDAIRTE 166
+ K +I E
Sbjct: 85 ERAKKSIWEE 94
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T +E E +G + + I++DF A+WC PC ++A LA ++ + +KVD D+
Sbjct: 14 TWKEHFEKGKGSQKL-IVVDFTASWCPPCKMIAPIFAELAKKF-PNVTFLKVDVDELKAV 71
Query: 140 ARDMQVRGLPTLFFI 154
A + V +PT F+
Sbjct: 72 AEEWNVEAMPTFIFL 86
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSA--MIVKVD------TDDEYEFARDMQVRG 147
++I+FYA WCG C + L +Y+ +I K+D T+D+Y +V G
Sbjct: 28 VLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQY------KVEG 81
Query: 148 LPTLFFISPDPNKDAIRTEG 167
PT++F K+ I+ EG
Sbjct: 82 FPTIYFAPSGDKKNPIKFEG 101
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 73 DYLVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLA--VEYESSAMIVK 130
D VK A+ E+V E N ++I+FYA WCG C + + + L + + + +I K
Sbjct: 26 DGPVKVVVAENFDEIVNNE-NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAK 84
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEG 167
+D + +VRG PT++F + + + EG
Sbjct: 85 MDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEG 120
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 96 IIIDFYATWCGP--------------CILMAQEIELLAVEYESSAMIVKVDTDDEYEFAR 141
I++DF+A WCGP C ++A ++ +A EY+ + K++ D A
Sbjct: 24 ILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83
Query: 142 DMQVRGLPTLFF 153
+RG+PTL
Sbjct: 84 KYGIRGIPTLLL 95
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 92 RNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
+N +I+DF+A WCGPC +A E + Y + + +KVD D+ E + +PT
Sbjct: 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTY-TKMVFIKVDVDEVSEVTEKENITSMPTF 83
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATW GP ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWSGPSKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 CQDVASECEVKCMPTFQFF 80
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 73 DYLVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVD 132
D VK A+ E+V E N ++I+FYA WCG C + + + L + IV
Sbjct: 351 DGPVKVVVAENFDEIVNNE-NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAK 409
Query: 133 TDDEYEFARDM----QVRGLPTLFFISPDPNKDAIRTEG 167
D A D+ +VRG PT++F + + + EG
Sbjct: 410 MD---ATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEG 445
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
++++F+A WCG +A E E A + + KVD V G PTL
Sbjct: 24 MLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTL 79
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFF 153
I++DF+A WC ++A ++ +A EY+ + K++ D A +RG+PTL
Sbjct: 23 ILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 95 PIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
PIII F +WC PC M E +A + E +D +D + ++ +R LP+L
Sbjct: 19 PIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEKTMAELNIRTLPSL 75
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 85 QELVRGERNVPIII-DFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDM 143
Q+L R+ I++ +F A WCGP +A L+ Y S M + +D D+ +F+
Sbjct: 37 QKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELSDFSASW 95
Query: 144 QVRGLPTLFFI 154
+++ PT FF+
Sbjct: 96 EIKATPTFFFL 106
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
+++FYA WCG C + E + A + + V+ D V+G PT+
Sbjct: 39 LVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGA 98
Query: 157 DPNK 160
+ NK
Sbjct: 99 NKNK 102
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
T + E++R N +++D +A WC PC L + +A +Y+ A+ +++ D+ +
Sbjct: 10 TEENFDEVIRN--NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKI 67
Query: 140 ARDMQVRGLP-TLFFIS 155
A V +P TL F++
Sbjct: 68 ADKYSVLNIPTTLIFVN 84
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ KTA QE + + +++DF ATWCGPC ++ L+ +Y S+ + ++VD DD
Sbjct: 5 IESKTA--FQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDD 61
Query: 136 EYEFARDMQVRGLPTLFFI 154
+ A + +V+ +PT F
Sbjct: 62 XQDVASEXEVKCMPTFQFF 80
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 100 FYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISPDPN 159
F A WCGPC + + +E +A E+ + KVD D+ E +V LPT FI
Sbjct: 44 FTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNSEIVSKCRVLQLPT--FIIARSG 100
Query: 160 KDAIRTEGLIP---IQMMRDIIDN 180
K G P Q +RDII +
Sbjct: 101 KMLGHVIGANPGMLRQKLRDIIKD 124
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 84 IQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDM 143
+Q+ + P++ F++ C+ + +E LA +Y ++ K+D D E A
Sbjct: 17 LQQTLEQSXTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQXIAAQF 76
Query: 144 QVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+R +PT++ D +G P + +R ++D
Sbjct: 77 GLRAIPTVYLFQNGQPVDGF--QGPQPEEAIRALLD 110
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
++++F+A WCG C +A E E A + + KVD V G PTL
Sbjct: 24 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTL 79
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 81 AQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVE---YESSAMIVKVDTDDEY 137
A ++ V G R+ ++F+A+WCG CI A LA + + + + +D +E
Sbjct: 19 ADTVRGAVLGSRSA-WAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET 77
Query: 138 EFA--RDMQVRGLPTLFFI 154
A RD + G PT+ F
Sbjct: 78 NSAVCRDFNIPGFPTVRFF 96
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+ ++FYA WCG C +A + L Y+ IV D ++V PTL F
Sbjct: 28 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFP 87
Query: 156 PDPNKDAIRTEG 167
++ I G
Sbjct: 88 ASADRTVIDYNG 99
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 84 IQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDM 143
+Q+++ P++ F++ C+ + +E LA +Y ++ K+D D E A
Sbjct: 17 LQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQF 76
Query: 144 QVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+R +PT++ D +G P + +R ++D
Sbjct: 77 GLRAIPTVYLFQNGQPVDGF--QGPQPEEAIRALLD 110
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFIS 155
+ ++FYA WCG C +A + L Y+ IV D ++V PTL F
Sbjct: 270 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFP 329
Query: 156 PDPNKDAIRTEG 167
++ I G
Sbjct: 330 ASADRTVIDYNG 341
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAV-----EYESSAMIVKVDTDDEYEFARDM--QVRGL 148
++I+FYA WCG C +A + E L E++ +I KVD A D+ +++G
Sbjct: 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT-----ANDVPDEIQGF 82
Query: 149 PTL 151
PT+
Sbjct: 83 PTI 85
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAV---EYESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
++++FYA WCG C A E E +A + + + K+D A V G PT+
Sbjct: 37 VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTI 95
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 97 IIDFYATWCGPCILMAQEIELLA-VEYESSA--MIVKVDTDDEYEFARDMQVRGLPTLFF 153
I FYA WCG C +A E L+ E+ A I +VD E VRG PTL
Sbjct: 25 FIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLL 84
Query: 154 I 154
Sbjct: 85 F 85
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 97 IIDFYATWCGPCILMAQEIELLA-VEYESSA--MIVKVDTDDEYEFARDMQVRGLPTLFF 153
I FYA WCG C +A E L+ E+ A I +VD E VRG PTL
Sbjct: 27 FIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLL 86
Query: 154 I 154
Sbjct: 87 F 87
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 97 IIDFYATWCGPCILMAQEIELLA-VEYESSA--MIVKVDTDDEYEFARDMQVRGLPTLFF 153
I FYA WCG C +A E L+ E+ A I +VD E VRG PTL
Sbjct: 20 FIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLL 79
Query: 154 I 154
Sbjct: 80 F 80
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 93 NVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTD--DEYEFARDMQVRGLPT 150
N +++FYA WCG C ++ A + + V+ D V G PT
Sbjct: 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPT 94
Query: 151 LFFISP 156
L P
Sbjct: 95 LMVFRP 100
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYE---SSAMIVKVD-TDDEYEFARDMQVRGLPTL 151
+++ +YA WCG C +A + LA Y S +I K+D T+++ R + + G PT+
Sbjct: 379 VLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND---VRGVVIEGYPTI 435
Query: 152 FFISPDPNKDAIRTEGLIPIQMMRDII 178
+++ +G + + D I
Sbjct: 436 VLYPGGKKSESVVYQGSRSLDSLFDFI 462
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 72 EDYLVKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQE-IELLAVEYESSAMIVK 130
ED V K E ++ V + +F+A WCG C MA E ++ E + + +
Sbjct: 12 EDSAVVKLATDSFNEYIQSHDLV--LAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQ 69
Query: 131 VDTDDEYEFARDMQVRGLPTL-FFISPDPNKDAIRTEG 167
+D + + + + G P+L F + D N ++I EG
Sbjct: 70 IDCTENQDLCMEHNIPGFPSLKIFKNSDVN-NSIDYEG 106
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 96 IIIDFYATWCGPCILMAQEI---ELLAVEYESSAMIVKVDTD--DEYEFARDMQVRGLPT 150
+ +D + TWCGPC +++ + L+A + + +K+D + + E + V PT
Sbjct: 30 LFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPT 89
Query: 151 LFFIS 155
L FI+
Sbjct: 90 LLFIN 94
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTLFFISP 156
++DFYA W GP A E ELLA + KVD + + ++ P++
Sbjct: 679 VVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQY 738
Query: 157 DPNKDAIRTE 166
+ K +I E
Sbjct: 739 ERAKKSIWEE 748
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 80 TAQEIQELVRGERNVPI-IIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYE 138
T ELV+ ++ + ++DFY+ W P ++ E + +A + VD +
Sbjct: 549 TPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHS 608
Query: 139 FARDMQVRGLPTLFF 153
F V+ P + F
Sbjct: 609 FCTQENVQRYPEIRF 623
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYES-SAMIVKVDTD 134
V+ T + +EL+ G+ +I+FYA WC C + E E A E I KVD
Sbjct: 9 VRVITDENWRELLEGD----WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT 64
Query: 135 DEYEFARDMQVRGLPTLF 152
++ + + LPT++
Sbjct: 65 EQPGLSGRFIINALPTIY 82
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 28/109 (25%)
Query: 96 IIIDFYATWCGPCI------------LMAQEIELLAVEYESSAMIVK------------- 130
+ ++F+ TWC PC +Q +E++AV S + V
Sbjct: 29 VFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+DTD + A D V LPT F I+P+ + T G + M+ D ++
Sbjct: 89 LDTDRQVLDAYD--VSPLPTTFLINPEGKVVKVVT-GTMTESMIHDYMN 134
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 28/109 (25%)
Query: 96 IIIDFYATWCGPC------------ILMAQEIELLAVEYESSAMIVK------------- 130
+ ++F+ TWC PC +Q +E++AV S + V
Sbjct: 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+DTD + A D V LPT F I+P+ + T G + M+ D ++
Sbjct: 89 LDTDRQVLDAYD--VSPLPTTFLINPEGKVVKVVT-GTMTESMIHDYMN 134
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAM-IVKVDTDDEYEFARDMQVRGLPTLFFI 154
+ +DF+A+WCGPC +Y++ +V V+ D + A + +P F +
Sbjct: 31 VYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDAKTGDAXKFLAQ-VPAEFTV 89
Query: 155 SPDPNKDAIRTEGL 168
+ DP R G+
Sbjct: 90 AFDPKGQTPRLYGV 103
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
+A + +EL+R + +++ F+A W C M + + LA E + VK++ + E
Sbjct: 25 SAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVS-FVKLEAEGVPEV 83
Query: 140 ARDMQVRGLPTLFFI 154
+ ++ +PT F
Sbjct: 84 SEKYEISSVPTFLFF 98
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139
+A + +EL+R + +++ F+A W C M + + LA E + VK++ + E
Sbjct: 19 SAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVS-FVKLEAEGVPEV 77
Query: 140 ARDMQVRGLPTLFFI 154
+ ++ +PT F
Sbjct: 78 SEKYEISSVPTFLFF 92
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 27/87 (31%)
Query: 96 IIIDFYATWCGPC------------ILMAQEIELLAVEYESSAMIVK------------- 130
+ ++F+ TWC PC +Q +E++AV S + V
Sbjct: 29 VFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVAVNVGESKIAVHNFXKSYGVNFPVV 88
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPD 157
+DTD + A D V LPT F I+P+
Sbjct: 89 LDTDRQVLDAYD--VSPLPTTFLINPE 113
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 95 PIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPTL-FF 153
P+++ FY+ C C E A EY SSA+ +++ A V+G PT FF
Sbjct: 26 PVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFF 85
Query: 154 ISPDP 158
P
Sbjct: 86 CHGRP 90
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQ----EIELLAVEYESSAMIVKVDTD 134
KT E+ + + + P+++D YA WC C + + ++ ++ + V +
Sbjct: 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTAN 76
Query: 135 DEYEFA--RDMQVRGLPTLFFI 154
D + A + + V GLPT+ F
Sbjct: 77 DAQDVALLKHLNVLGLPTILFF 98
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQ----EIELLAVEYESSAMIVKVDTD 134
KT E+ + + + P+++D YA WC C + + ++ ++ + V +
Sbjct: 14 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTAN 73
Query: 135 DEYEFA--RDMQVRGLPTLFFI 154
D + A + + V GLPT+ F
Sbjct: 74 DAQDVALLKHLNVLGLPTILFF 95
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 76 VKKKTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDD 135
++ K + ++ +N I+I F A WC PC + + + Y +V +D D
Sbjct: 23 IELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI 80
Query: 136 EYEFARDMQVRGLPTLFF 153
+ ++ LPT F
Sbjct: 81 HPKLNDQHNIKALPTFEF 98
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 97 IIDFYATWCGPCILMAQEIELLAVEY----ESSAMIVKVDTDDEYEFARDMQVRGLPTL 151
+++FYA WCG C + E A E + + VD A +RG PT+
Sbjct: 29 MVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 87
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVE-YESSAMIVKVDTDDEYEFARDMQVRGLPTLFFI 154
I++ F+ +W PC + Q E ++ E S+ + +D D+ E + ++ +P I
Sbjct: 24 IVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIII 83
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein From
Neisseria Meningitidis Serogroup B
Length = 151
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Query: 77 KKKTAQEIQELVRGERNVPI-IIDFYATWCGPC 108
K T Q +Q L P+ I++ +ATWCGPC
Sbjct: 12 KDNTPQSLQSL-----KAPVRIVNLWATWCGPC 39
>pdb|3T58|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
Length = 519
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 81 AQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLA---VEYESSAMIVKVDTDDEY 137
A ++ V G + ++F+A+WCG I A + LA ++ + + +D +E
Sbjct: 19 ADSVRPTVLGSSSA-WAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET 77
Query: 138 EFA--RDMQVRGLPTLFFI 154
A R+ + G PT+ F
Sbjct: 78 NSAVCREFNIAGFPTVRFF 96
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 96 IIIDFYATWCGPC 108
I ID +ATWCGPC
Sbjct: 33 IYIDVWATWCGPC 45
>pdb|1VRS|D Chain D, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|E Chain E, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|F Chain F, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
Length = 134
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVE--------YESSAMIVK 130
KT E+ + + + P+++D YA WC + ++E E ++ +
Sbjct: 17 KTVDELNQALVEAKGKPVMLDLYADWC----VASKEFEKYTFSDPQVQKALADTVLLQAN 72
Query: 131 VDTDDEYEFA--RDMQVRGLPTLFFI 154
V +D + A + + V GLPT+ F
Sbjct: 73 VTANDAQDVALLKHLNVLGLPTILFF 98
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 20/101 (19%)
Query: 97 IIDFYATWC------GPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFARDMQVRGLPT 150
+++FYA WC P A ++ E+ + +VD D + A+ ++ PT
Sbjct: 26 LVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPT 85
Query: 151 L-FFISPDPNK-------------DAIRTEGLIPIQMMRDI 177
L F + K D IR + PIQ +RD+
Sbjct: 86 LKLFRNGXXXKREYRGQRSVKALADYIRQQKSDPIQEIRDL 126
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 28/109 (25%)
Query: 96 IIIDFYATWCGPC------------ILMAQEIELLAVEYESSAMIVK------------- 130
+ ++F+ TWC P +Q +E++AV S + V
Sbjct: 29 VFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+DTD + A D V LPT F I+P+ + T G + M+ D ++
Sbjct: 89 LDTDRQVLDAYD--VSPLPTTFLINPEGKVVKVVT-GTMTESMIHDYMN 134
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 28/109 (25%)
Query: 96 IIIDFYATWCGPC------------ILMAQEIELLAVEYESSAMIVK------------- 130
+ ++F+ TW PC +Q +E++AV S + V
Sbjct: 29 VFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 131 VDTDDEYEFARDMQVRGLPTLFFISPDPNKDAIRTEGLIPIQMMRDIID 179
+DTD + A D V LPT F I+P+ + T G + M+ D ++
Sbjct: 89 LDTDRQVLDAYD--VSPLPTTFLINPEGKVVKVVT-GTMTESMIHDYMN 134
>pdb|3FKF|A Chain A, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|B Chain B, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|C Chain C, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|D Chain D, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
Length = 148
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 92 RNVPIIIDFYATWCGPCILMAQEIELLAVEYES----SAMIVKVDTDDE 136
RN ++++F+A+WC P E++ L EY+ + + + +D D E
Sbjct: 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAXLGISLDIDRE 80
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 96 IIIDFYATWCGPC 108
+I++F+ATWC PC
Sbjct: 31 VIVNFWATWCPPC 43
>pdb|2FY6|A Chain A, Structure Of The N-Terminal Domain Of Neisseria
Meningitidis Pilb
Length = 143
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYE-SSAMIVKV 131
KTA V +++ P +I F+A+WC C+ + E A + + SSA ++ V
Sbjct: 9 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITV 62
>pdb|2JZR|A Chain A, Solution Structure Of The Oxidized Form (Cys67-Cys70) Of
The N-Terminal Domain Of Pilb From N. Meningitidis.
pdb|2JZS|A Chain A, Solution Structure Of The Reduced Form Of The N-Terminal
Domain Of Pilb From N. Meningitidis.
pdb|2K9F|A Chain A, Structural Features Of The Complex Between The Dsbd N-
Terminal And The Pilb N-Terminal Domains From Neisseria
Meningitidis
Length = 144
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYE-SSAMIVKV 131
KTA V +++ P +I F+A+WC C+ + E A + + SSA ++ V
Sbjct: 10 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITV 63
>pdb|2H30|A Chain A, Crystal Structure Of The N-Terminal Domain Of Pilb From
Neisseria Gonorrhoeae
Length = 164
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 79 KTAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYE-SSAMIVKV 131
KTA V +++ P +I F+A+WC C+ + E A + + SSA ++ V
Sbjct: 24 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITV 77
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 97 IIDFYATWCGPC 108
I++F+ATWC PC
Sbjct: 38 IVNFFATWCPPC 49
>pdb|2LST|A Chain A, Solution Structure Of A Thioredoxin From Thermus
Thermophilus
Length = 130
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 129 VKVDTDDEYEFARDMQVRGLPTLFFISPD 157
V VDT + E AR +V G PT F+ P
Sbjct: 60 VSVDTPEGQELARRYRVPGTPTFVFLVPK 88
>pdb|3EVI|A Chain A, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
pdb|3EVI|B Chain B, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
Length = 118
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 82 QEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEFAR 141
Q + E+ E +V +II Y + C+L+ Q + LLA ++ + VK + +
Sbjct: 12 QYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKF-VKAIVNSCIQHYH 70
Query: 142 DMQVRGLPTLF 152
D LPT+F
Sbjct: 71 D---NCLPTIF 78
>pdb|2DJ0|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Related Transmembrane Protein 2
Length = 137
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 85 QELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAM-IVKVD----TD--DEY 137
+EL R +R V I++F+A W C A L+++Y + + KVD TD Y
Sbjct: 19 EELERDKR-VTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRY 77
Query: 138 EFARDMQVRGLPTLFFISPDPNKDAIR 164
+ + + LPTL K+A+R
Sbjct: 78 KVSTSPLTKQLPTLILF--QGGKEAMR 102
>pdb|3HA9|A Chain A, The 1.7a Crystal Structure Of A Thioredoxin-like Protein
From Aeropyrum Pernix
Length = 165
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 96 IIIDFYATWCGPCILMAQEIELLAVEYESSAMI 128
+I+ F A WC C+ MA ++ L +Y ++I
Sbjct: 40 VILWFMAAWCPSCVYMADLLDRLTEKYREISVI 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,584,852
Number of Sequences: 62578
Number of extensions: 169811
Number of successful extensions: 884
Number of sequences better than 100.0: 167
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 684
Number of HSP's gapped (non-prelim): 172
length of query: 182
length of database: 14,973,337
effective HSP length: 93
effective length of query: 89
effective length of database: 9,153,583
effective search space: 814668887
effective search space used: 814668887
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)