Your job contains 1 sequence.
>041164
MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA
GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ
YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA
DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF
STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI
SSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041164
(357 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199772 - symbol:AT1G76170 species:3702 "Arabi... 1484 3.9e-155 2
UNIPROTKB|Q5FW05 - symbol:ctu1 "Cytoplasmic tRNA 2-thiola... 1231 2.6e-125 1
UNIPROTKB|Q05AW7 - symbol:ctu1 "Cytoplasmic tRNA 2-thiola... 1224 1.5e-124 1
ZFIN|ZDB-GENE-040426-704 - symbol:ctu1 "cytosolic thiouri... 1206 1.2e-122 1
DICTYBASE|DDB_G0282921 - symbol:ctu1 "cytosolic thiouridy... 1185 2.0e-120 1
UNIPROTKB|A8PVM6 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 754 4.2e-117 2
FB|FBgn0033375 - symbol:CG8078 species:7227 "Drosophila m... 1126 3.5e-114 1
UNIPROTKB|B4HSL7 - symbol:GM20632 "Cytoplasmic tRNA 2-thi... 1124 5.8e-114 1
UNIPROTKB|B0DK66 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 1122 9.4e-114 1
UNIPROTKB|B3N7L9 - symbol:GG10584 "Cytoplasmic tRNA 2-thi... 1119 1.9e-113 1
UNIPROTKB|B4P3W7 - symbol:GE22576 "Cytoplasmic tRNA 2-thi... 1119 1.9e-113 1
UNIPROTKB|P0CS70 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 1119 1.9e-113 1
UNIPROTKB|P0CS71 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 1119 1.9e-113 1
UNIPROTKB|Q4P6R3 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 770 2.1e-113 2
UNIPROTKB|B4J5B3 - symbol:GH20281 "Cytoplasmic tRNA 2-thi... 1118 2.5e-113 1
UNIPROTKB|B4KLL0 - symbol:GI19452 "Cytoplasmic tRNA 2-thi... 1112 1.1e-112 1
UNIPROTKB|B4NN33 - symbol:GK22963 "Cytoplasmic tRNA 2-thi... 1112 1.1e-112 1
UNIPROTKB|B3MI77 - symbol:GF12710 "Cytoplasmic tRNA 2-thi... 1108 2.9e-112 1
UNIPROTKB|Q28ZC1 - symbol:GA20807 "Cytoplasmic tRNA 2-thi... 1106 4.6e-112 1
UNIPROTKB|B4GHY8 - symbol:GL16852 "Cytoplasmic tRNA 2-thi... 1105 5.9e-112 1
UNIPROTKB|B4LM02 - symbol:GJ21203 "Cytoplasmic tRNA 2-thi... 1101 1.6e-111 1
POMBASE|SPBC2G5.03 - symbol:ctu1 "cytosolic thiouridylase... 1094 8.7e-111 1
UNIPROTKB|Q16QI1 - symbol:AAEL011283 "Cytoplasmic tRNA 2-... 1092 1.4e-110 1
UNIPROTKB|Q7Q9I4 - symbol:AGAP005220 "Cytoplasmic tRNA 2-... 1090 2.3e-110 1
UNIPROTKB|A8WR63 - symbol:ctu-1 "Cytoplasmic tRNA 2-thiol... 1069 3.9e-108 1
UNIPROTKB|A5DPQ4 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 965 1.3e-107 2
UNIPROTKB|Q755T1 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 976 2.7e-107 2
UNIPROTKB|Q6CWX6 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 965 5.7e-107 2
UNIPROTKB|A2Q879 - symbol:ncs6 "Cytoplasmic tRNA 2-thiola... 1053 1.9e-106 1
WB|WBGene00017928 - symbol:tut-1 species:6239 "Caenorhabd... 1053 1.9e-106 1
UNIPROTKB|O76365 - symbol:tut-1 "Cytoplasmic tRNA 2-thiol... 1053 1.9e-106 1
UNIPROTKB|Q6FMB5 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 1043 2.2e-105 1
UNIPROTKB|Q6C8R5 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 948 1.5e-104 2
UNIPROTKB|A3GGB3 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 934 2.0e-102 2
UNIPROTKB|A7TER7 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 1013 3.3e-102 1
CGD|CAL0003670 - symbol:orf19.4634 species:5476 "Candida ... 928 5.2e-102 2
UNIPROTKB|Q5AML2 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 928 5.2e-102 2
UNIPROTKB|B5RV24 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 927 8.4e-102 2
SGD|S000003179 - symbol:NCS6 "Protein required for uridin... 1006 1.8e-101 1
ASPGD|ASPL0000059529 - symbol:AN0450 species:162425 "Emer... 930 2.1e-93 1
UNIPROTKB|G4MSW4 - symbol:MGG_04613 "ATP-binding domain-c... 917 5.0e-92 1
UNIPROTKB|A5E3Q3 - symbol:NCS6 "Cytoplasmic tRNA 2-thiola... 789 2.8e-84 2
MGI|MGI:2385277 - symbol:Ctu1 "cytosolic thiouridylase su... 803 6.0e-80 1
RGD|1308740 - symbol:Ctu1 "cytosolic thiouridylase subuni... 802 7.6e-80 1
UNIPROTKB|Q0VC66 - symbol:CTU1 "Cytoplasmic tRNA 2-thiola... 800 1.2e-79 1
UNIPROTKB|E1BII1 - symbol:LOC100297056 "Uncharacterized p... 799 1.6e-79 1
UNIPROTKB|Q7Z7A3 - symbol:CTU1 "Cytoplasmic tRNA 2-thiola... 790 1.4e-78 1
UNIPROTKB|F1RP87 - symbol:LOC100516084 "Uncharacterized p... 694 2.1e-68 1
UNIPROTKB|F1Q1N7 - symbol:CTU1 "Uncharacterized protein" ... 572 1.8e-55 1
UNIPROTKB|Q83CP2 - symbol:ttcA "tRNA 2-thiocytidine biosy... 191 1.2e-14 1
TIGR_CMR|CBU_1067 - symbol:CBU_1067 "conserved hypothetic... 191 1.2e-14 1
UNIPROTKB|Q74GW7 - symbol:ttcA "tRNA 2-thiocytidine biosy... 196 5.5e-14 1
TIGR_CMR|GSU_0127 - symbol:GSU_0127 "conserved hypothetic... 196 5.5e-14 1
UNIPROTKB|Q9KS29 - symbol:ttcA "tRNA 2-thiocytidine biosy... 199 6.3e-14 1
TIGR_CMR|VC_1432 - symbol:VC_1432 "conserved hypothetical... 199 6.3e-14 1
UNIPROTKB|P76055 - symbol:ttcA "predicted C32 tRNA thiola... 192 4.8e-13 1
UNIPROTKB|Q8EEM4 - symbol:ttcA "tRNA 2-thiocytidine biosy... 188 1.5e-12 1
TIGR_CMR|SO_2354 - symbol:SO_2354 "conserved hypothetical... 188 1.5e-12 1
UNIPROTKB|Q603C7 - symbol:ttcA "tRNA 2-thiocytidine biosy... 186 1.6e-12 1
UNIPROTKB|Q48FG8 - symbol:ttcA "tRNA 2-thiocytidine biosy... 180 6.3e-12 1
UNIPROTKB|Q47ZU5 - symbol:ttcA "tRNA 2-thiocytidine biosy... 180 1.5e-11 1
TIGR_CMR|CPS_2974 - symbol:CPS_2974 "PP-loop family prote... 180 1.5e-11 1
UNIPROTKB|Q4K882 - symbol:ttcA "tRNA 2-thiocytidine biosy... 176 2.0e-11 1
UNIPROTKB|Q885Z7 - symbol:ttcA "tRNA 2-thiocytidine biosy... 174 3.7e-11 1
UNIPROTKB|Q5LW09 - symbol:ttcA "tRNA 2-thiocytidine biosy... 150 3.9e-08 1
TIGR_CMR|SPO_0534 - symbol:SPO_0534 "conserved hypothetic... 150 3.9e-08 1
UNIPROTKB|Q32NV1 - symbol:ctu2-b "Cytoplasmic tRNA 2-thio... 124 2.0e-07 2
TIGR_CMR|CHY_0213 - symbol:CHY_0213 "tRNA(Ile)-lysidine s... 145 3.8e-07 1
UNIPROTKB|Q08B12 - symbol:ctu2-a "Cytoplasmic tRNA 2-thio... 123 1.1e-06 2
WB|WBGene00022195 - symbol:Y71H2B.5 species:6239 "Caenorh... 144 1.5e-06 1
UNIPROTKB|Q28ES8 - symbol:ctu2 "Cytoplasmic tRNA 2-thiola... 114 2.1e-06 2
UNIPROTKB|Q0BYJ5 - symbol:ttcA "tRNA 2-thiocytidine biosy... 132 4.7e-06 1
UNIPROTKB|Q5HX48 - symbol:CJE0113 "PP-loop family protein... 127 1.1e-05 1
TIGR_CMR|CJE_0113 - symbol:CJE_0113 "PP-loop family prote... 127 1.1e-05 1
TIGR_CMR|SO_1645 - symbol:SO_1645 "tRNA(Ile)-lysidine syn... 123 0.00012 1
DICTYBASE|DDB_G0290035 - symbol:DDB_G0290035 species:4468... 126 0.00018 1
TIGR_CMR|GSU_1810 - symbol:GSU_1810 "tRNA(Ile)-lysidine s... 121 0.00020 1
>TAIR|locus:2199772 [details] [associations]
symbol:AT1G76170 species:3702 "Arabidopsis thaliana"
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=IEA] InterPro:IPR000541
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 EMBL:CP002684
GO:GO:0005524 GO:GO:0005737 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K14168 OMA:YEELYGW GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 IPI:IPI00546712
RefSeq:NP_177744.2 UniGene:At.50040 ProteinModelPortal:F4I2A4
EnsemblPlants:AT1G76170.1 GeneID:843949 KEGG:ath:AT1G76170
Uniprot:F4I2A4
Length = 332
Score = 1484 (527.5 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 280/320 (87%), Positives = 300/320 (93%)
Query: 38 ECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLL 97
ECFYEVFEEEIHQVIVGN+LFK GER+AIGASGGKDS+VLA+VLSELNRRH+YGLDLFLL
Sbjct: 14 ECFYEVFEEEIHQVIVGNRLFKFGERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLL 73
Query: 98 SIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVF 157
SIDEGI+GYRDDSL+TVKRNE+QYGLPL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVF
Sbjct: 74 SIDEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 133
Query: 158 RRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCK 217
RRQALDRGA+LLKVDK+ TGHNADDIAETV+LNILRGDIARLSRCT ITTGEDGPIPRCK
Sbjct: 134 RRQALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRCK 193
Query: 218 PFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSG 277
PFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRGFA EFI DLERLRPRAILDIIKSG
Sbjct: 194 PFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGFACEFINDLERLRPRAILDIIKSG 252
Query: 278 ENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKD 337
E+FRI+T+TKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI R RG N KD
Sbjct: 253 EDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIGRPRGNVNGDYKD 312
Query: 338 MKQNKGTKNIESKQCGTLDF 357
+K K IESKQCG+LDF
Sbjct: 313 IKARSTAKTIESKQCGSLDF 332
Score = 50 (22.7 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 1 MEVAESKSKKAGG 13
ME E KSKKAGG
Sbjct: 1 MEAGEEKSKKAGG 13
>UNIPROTKB|Q5FW05 [details] [associations]
symbol:ctu1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 CTD:90353 GeneTree:ENSGT00390000001041
HOVERGEN:HBG100428 OrthoDB:EOG4SBF02 EMBL:BC089678
RefSeq:NP_001015743.1 UniGene:Str.20338 ProteinModelPortal:Q5FW05
STRING:Q5FW05 Ensembl:ENSXETT00000008736 GeneID:548460
KEGG:xtr:548460 Xenbase:XB-GENE-5872210 InParanoid:Q5FW05
OMA:ECIYSPE Bgee:Q5FW05 Uniprot:Q5FW05
Length = 341
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 230/342 (67%), Positives = 272/342 (79%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C +R+A L+RPKT +C++CF+ FEEEIH IV +LF GE++ IGASGGKDST
Sbjct: 5 CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+ YGLDL L+S+DEGISGYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L V+KI TGHNADDIAETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG +G IPRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTSITTGSEGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE +RP +I+DII SGEN + +MP QGTC RCGYISSQ CKACVLLEGL
Sbjct: 244 RAFLKDLEAIRPSSIMDIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 303
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
NRGLPK+GI G++++ + + E ++ +DF
Sbjct: 304 NRGLPKLGI----GKHHKLHHKLLSQEPLSEQEERKLKAVDF 341
>UNIPROTKB|Q05AW7 [details] [associations]
symbol:ctu1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
KO:K14168 GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269
PROSITE:PS01263 InterPro:IPR020554 CTD:90353 HOVERGEN:HBG100428
EMBL:BC123240 RefSeq:NP_001090363.1 UniGene:Xl.34877
ProteinModelPortal:Q05AW7 GeneID:779274 KEGG:xla:779274
Xenbase:XB-GENE-5872246 Uniprot:Q05AW7
Length = 341
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 226/309 (73%), Positives = 259/309 (83%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C + +A L+RPKT +C++CF+ FEEEIH IV +LF GE++ IGASGGKDST
Sbjct: 5 CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+ YGLDL LLS+DEGISGYRDDSLQTVKRN+ QY LPLKIVSY +LYG
Sbjct: 65 VLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L ++KI TGHNADDIAETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG +G IPRCKP KYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTAITTGSEGAIPRCKPLKYTYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE +RP +I+DII SGEN ++ +MP QGTC RCGYISSQ CKACVLLEGL
Sbjct: 244 RVFLKDLEAIRPSSIIDIIHSGENLSVNEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 303
Query: 316 NRGLPKMGI 324
NRGLPK+GI
Sbjct: 304 NRGLPKLGI 312
>ZFIN|ZDB-GENE-040426-704 [details] [associations]
symbol:ctu1 "cytosolic thiouridylase subunit 1
homolog (S. pombe)" species:7955 "Danio rerio" [GO:0034227 "tRNA
thio-modification" evidence=IEA;ISS] [GO:0000049 "tRNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR000541
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
ZFIN:ZDB-GENE-040426-704 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 CTD:90353 GeneTree:ENSGT00390000001041
HOVERGEN:HBG100428 OrthoDB:EOG4SBF02 EMBL:BC044158 EMBL:BC155784
EMBL:BC154793 IPI:IPI00486545 RefSeq:NP_956424.1 UniGene:Dr.80579
ProteinModelPortal:Q803X1 STRING:Q803X1 Ensembl:ENSDART00000017850
GeneID:393098 KEGG:dre:393098 InParanoid:Q803X1 NextBio:20814172
Bgee:Q803X1 Uniprot:Q803X1
Length = 343
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 231/345 (66%), Positives = 270/345 (78%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C Q++A LKRPKT +C++CF+ FEEEIHQ I LF GE +AIGASGGKDST
Sbjct: 5 CSNCEQKRAVLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVMKLLNERYDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK +GLKNNCTFCGVFRRQALDRGA +L VDKI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
IARL RCT I+T DG IPRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 185 IARLRRCTAISTSSEGDGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE +RP AI+D+I SGE + KMP QGTC RCGYISSQ CK+CVLLE
Sbjct: 244 HARAFLKDLESVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLE 303
Query: 314 GLNRGLPKMGIVRSRGQNNE-RTKDMKQNKGTKNIESKQCGTLDF 357
GLNRGLPK+GI G+++ K + Q T+ E ++ +DF
Sbjct: 304 GLNRGLPKLGI----GKHHRLHGKILAQEPLTEQ-EERKLKAVDF 343
>DICTYBASE|DDB_G0282921 [details] [associations]
symbol:ctu1 "cytosolic thiouridylase subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0034227 "tRNA
thio-modification" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 dictyBase:DDB_G0282921 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 GenomeReviews:CM000153_GR GO:GO:0016740
EMBL:AAFI02000049 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037 KO:K14168
OMA:YEELYGW GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269
PROSITE:PS01263 InterPro:IPR020554 EMBL:U66527 RefSeq:XP_639332.1
ProteinModelPortal:Q94480 STRING:Q94480 EnsemblProtists:DDB0191478
GeneID:8623903 KEGG:ddi:DDB_G0282921 ProtClustDB:CLSZ2430412
Uniprot:Q94480
Length = 360
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 223/352 (63%), Positives = 267/352 (75%)
Query: 5 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI 64
E+ + K +LC CN + LKRPKT E IC+ECFY VFE+EIH I+ N LFK G+R+
Sbjct: 2 ENTATKKKSKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRV 61
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
AIGASGGKDSTVLA +++ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +P
Sbjct: 62 AIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYQIP 121
Query: 125 LKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
LKI+SYK+LY WTMD+IVK IGLK NCTFCGVFRRQALDRGA +LK +KI TGHNADDIA
Sbjct: 122 LKILSYKELYNWTMDDIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNADDIA 181
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
ETVL+N+LRGDI RL RC I TG +G +PR KPFKYTY+KEI+ YAYFK+LDYFSTEC
Sbjct: 182 ETVLMNLLRGDIPRLQRCVNIITGSEGALPRSKPFKYTYQKEIVM-YAYFKKLDYFSTEC 240
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
IY+PNAYRG AR+F+KDLE +RP I+DII S ENF KMP Q C +CGYI S
Sbjct: 241 IYAPNAYRGHARDFLKDLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSND 300
Query: 305 WCKACVLLEGLNRGLPK--MGIVRSRGQNNERTKDMKQNKGTKNIESKQCGT 354
C AC LL+ LN GL K + I RG++N + N T +ES T
Sbjct: 301 ICMACDLLKNLNSGLAKVKLSINLKRGKDNNNNSNNNDNNNTLKLESTSAAT 352
>UNIPROTKB|A8PVM6 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:425265 "Malassezia globosa CBS 7966" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 OrthoDB:EOG4M0J9F
EMBL:AAYY01000003 RefSeq:XP_001731641.1 ProteinModelPortal:A8PVM6
GeneID:5855947 KEGG:mgl:MGL_0909 Uniprot:A8PVM6
Length = 373
Score = 754 (270.5 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 139/199 (69%), Positives = 167/199 (83%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C +A L+RPKT + +CR CF+ VFE E+HQ IV QLF+ G+R+AIGASGGKD
Sbjct: 3 RECELCGTERAVLRRPKTGDLVCRACFFHVFETEVHQTIVEAQLFRRGDRVAIGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLK++ YK+L
Sbjct: 63 STVLAYVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQEQYGIPLKVLGYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGW+MD+IV IG KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 123 YGWSMDDIVASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAETVLMNVLR 182
Query: 194 GDIARLSRCT-LITTGEDG 211
GDIARL RCT +IT G DG
Sbjct: 183 GDIARLERCTDIITKGPDG 201
Score = 420 (152.9 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 83/140 (59%), Positives = 101/140 (72%)
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
G G I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP
Sbjct: 222 GGSG-IRRSKPFKYAYEKEIVM-YAYFKQLDYFSTECIYSPNAYRGYARAFLKDLESIRP 279
Query: 268 RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRS 327
+I+DII SGEN ++ K Q TC RCGYISS + CKACVLLEGLNRG P +G+
Sbjct: 280 SSIIDIIHSGENLHVAGQVKRAVQRTCTRCGYISSNELCKACVLLEGLNRGAPALGV--- 336
Query: 328 RGQNNERTKDMKQNKGTKNI 347
R + ++ + + GT +I
Sbjct: 337 RSDKSRAVREARLD-GTSDI 355
>FB|FBgn0033375 [details] [associations]
symbol:CG8078 species:7227 "Drosophila melanogaster"
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034227
"tRNA thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 EMBL:AE013599 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OMA:YEELYGW
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
GeneTree:ENSGT00390000001041 EMBL:AY102671 RefSeq:NP_610451.1
UniGene:Dm.13362 ProteinModelPortal:Q7JWW5 SMR:Q7JWW5 IntAct:Q7JWW5
STRING:Q7JWW5 PaxDb:Q7JWW5 PRIDE:Q7JWW5 EnsemblMetazoa:FBtr0088631
GeneID:35920 KEGG:dme:Dmel_CG8078 UCSC:CG8078-RA
FlyBase:FBgn0033375 InParanoid:Q7JWW5 PhylomeDB:Q7JWW5
GenomeRNAi:35920 NextBio:795830 Bgee:Q7JWW5 Uniprot:Q7JWW5
Length = 343
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 216/320 (67%), Positives = 257/320 (80%)
Query: 15 LC-STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+C S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKD
Sbjct: 4 ICKSQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++L
Sbjct: 63 STVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LR
Sbjct: 123 YGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLR 182
Query: 194 GDIARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
GD ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAY
Sbjct: 183 GDTARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAY 240
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVL
Sbjct: 241 RGHARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVL 300
Query: 312 LEGLNRGLPKMGI-VRSRGQ 330
LEGLNRGLPK+GI +S+G+
Sbjct: 301 LEGLNRGLPKLGIGKKSKGE 320
>UNIPROTKB|B4HSL7 [details] [associations]
symbol:GM20632 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7238 "Drosophila sechellia" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH480816 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002033031.1 ProteinModelPortal:B4HSL7
EnsemblMetazoa:FBtr0203617 GeneID:6608294 KEGG:dse:Dsec_GM20632
FlyBase:FBgn0175514 Uniprot:B4HSL7
Length = 343
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 215/320 (67%), Positives = 257/320 (80%)
Query: 15 LC-STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+C S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKD
Sbjct: 4 ICKSKCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++L
Sbjct: 63 STVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LR
Sbjct: 123 YGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLR 182
Query: 194 GDIARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
GD ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAY
Sbjct: 183 GDTARLRRCTSIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAY 240
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVL
Sbjct: 241 RGHARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVL 300
Query: 312 LEGLNRGLPKMGI-VRSRGQ 330
LEGLNRGLPK+GI +++G+
Sbjct: 301 LEGLNRGLPKLGIGKKTKGE 320
>UNIPROTKB|B0DK66 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:486041 "Laccaria bicolor S238N-H82" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263 EMBL:DS547115
RefSeq:XP_001884404.1 ProteinModelPortal:B0DK66 GeneID:6079927
KEGG:lbc:LACBIDRAFT_330073 Uniprot:B0DK66
Length = 354
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 217/317 (68%), Positives = 250/317 (78%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + KA +KRPKT EQICRECF+ VFE E+H I LFK G+R+AIGASGGKDST
Sbjct: 6 CAICQKAKAMVKRPKTGEQICRECFFYVFETEVHNTITQANLFKPGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAYVMKMLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV +G KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAIVSQVGRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITT-GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
IARL RCT I T GED I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 186 IARLGRCTSICTQGED-TIRRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLL 312
AR F+KDLE RP AI+DII SGE F + K + Q C+RCGY+SS CKAC LL
Sbjct: 244 ARVFLKDLEAARPSAIIDIIHSGEAFEVREEVKATQRVQQVCQRCGYMSSNALCKACTLL 303
Query: 313 EGLNRGLPKMGIV-RSR 328
EGL RG+ GI R+R
Sbjct: 304 EGLERGMANSGITDRAR 320
>UNIPROTKB|B3N7L9 [details] [associations]
symbol:GG10584 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7220 "Drosophila erecta" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
EMBL:CH954177 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_001970365.1 ProteinModelPortal:B3N7L9
EnsemblMetazoa:FBtr0130638 GeneID:6541054 KEGG:der:Dere_GG10584
FlyBase:FBgn0102892 Uniprot:B3N7L9
Length = 343
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 215/326 (65%), Positives = 257/326 (78%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+G C RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGICTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRGQNNERTKDMK 339
LNRGLPK+GI +S+G+ +D +
Sbjct: 304 LNRGLPKLGIGKKSKGERMIAKQDQE 329
>UNIPROTKB|B4P3W7 [details] [associations]
symbol:GE22576 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7245 "Drosophila yakuba" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
EMBL:CM000157 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002089738.1 ProteinModelPortal:B4P3W7
STRING:B4P3W7 EnsemblMetazoa:FBtr0269094 GeneID:6528703
KEGG:dya:Dyak_GE22576 FlyBase:FBgn0239795 Uniprot:B4P3W7
Length = 343
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 215/326 (65%), Positives = 257/326 (78%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R A LKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AVLKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRLGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCIRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRGQNNERTKDMK 339
LNRGLPK+GI +S+G+ +D +
Sbjct: 304 LNRGLPKLGIGKKSKGERMIAKQDQE 329
>UNIPROTKB|P0CS70 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:214684 "Cryptococcus neoformans var. neoformans JEC21"
[GO:0000049 "tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble
uridine modification" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 EMBL:AE017345 RefSeq:XP_571070.1
ProteinModelPortal:P0CS70 GeneID:3257739 KEGG:cne:CNE04150
Uniprot:P0CS70
Length = 363
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 212/312 (67%), Positives = 254/312 (81%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGKDS
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDS 65
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ +YGLPLKI+SY +LY
Sbjct: 66 TVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQAEYGLPLKILSYSELY 125
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RG
Sbjct: 126 GWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRG 185
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL+RCT +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 186 DIARLARCTAVTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPDAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVLL 312
AR F+KDLE +RP AI+DII SGE+F + S + M TC RCGYISS CKAC LL
Sbjct: 245 ARVFLKDLEAVRPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALL 304
Query: 313 EGLNRGLPKMGI 324
EGL GL + +
Sbjct: 305 EGLESGLSRSAL 316
>UNIPROTKB|P0CS71 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:283643 "Cryptococcus neoformans var. neoformans B-3501A"
[GO:0000049 "tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble
uridine modification" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 HOGENOM:HOG000225864 KO:K14168 GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
EMBL:AAEY01000028 RefSeq:XP_775140.1 ProteinModelPortal:P0CS71
GeneID:4936425 KEGG:cnb:CNBE4140 Uniprot:P0CS71
Length = 363
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 212/312 (67%), Positives = 254/312 (81%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGKDS
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDS 65
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ +YGLPLKI+SY +LY
Sbjct: 66 TVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQAEYGLPLKILSYSELY 125
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RG
Sbjct: 126 GWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRG 185
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL+RCT +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 186 DIARLARCTAVTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPDAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVLL 312
AR F+KDLE +RP AI+DII SGE+F + S + M TC RCGYISS CKAC LL
Sbjct: 245 ARVFLKDLEAVRPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALL 304
Query: 313 EGLNRGLPKMGI 324
EGL GL + +
Sbjct: 305 EGLESGLSRSAL 316
>UNIPROTKB|Q4P6R3 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:237631 "Ustilago maydis 521" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829
GO:GO:0005524 GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037 KO:K14168
OMA:YEELYGW GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263
InterPro:IPR020554 OrthoDB:EOG4M0J9F GO:GO:0032447 GO:GO:0002143
EMBL:AACP01000149 RefSeq:XP_760347.1 ProteinModelPortal:Q4P6R3
STRING:Q4P6R3 EnsemblFungi:UM04200T0 GeneID:3632293
KEGG:uma:UM04200.1 Uniprot:Q4P6R3
Length = 396
Score = 770 (276.1 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
Identities = 141/199 (70%), Positives = 167/199 (83%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN +A L+RPKT +QIC+ECF+ VFE E+H IV N LFK G+R+AIGASGGKD
Sbjct: 4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNNLFKRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +L
Sbjct: 64 STVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD+IVK +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 124 YGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAETVLMNVLR 183
Query: 194 GDIARLSRCT-LITTGEDG 211
GDIARL RCT ++T G DG
Sbjct: 184 GDIARLERCTDIVTKGPDG 202
Score = 369 (135.0 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
Identities = 78/144 (54%), Positives = 100/144 (69%)
Query: 205 ITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
I G G I R KPF Y YEKEI+ YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE
Sbjct: 220 IGVGGSG-IRRSKPFMYAYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGYARTFLKDLEA 277
Query: 265 LRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+RP +I+DII+S + S K Q C RCGYISS CKAC+LLEGL +G P++GI
Sbjct: 278 IRPSSIVDIIQS-----VKQSRKTQLQN-CLRCGYISSNTVCKACILLEGLEKGTPQLGI 331
Query: 325 VRSRGQNNERTKDMKQNKGTKNIE 348
+ + + KD++ ++ +K +E
Sbjct: 332 ---GSEKSRKIKDIR-SENSKEVE 351
>UNIPROTKB|B4J5B3 [details] [associations]
symbol:GH20281 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7222 "Drosophila grimshawi" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH916367 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OMA:YEELYGW
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_001986888.1 ProteinModelPortal:B4J5B3 STRING:B4J5B3
EnsemblMetazoa:FBtr0155695 GeneID:6560206 KEGG:dgr:Dgri_GH20281
FlyBase:FBgn0127745 InParanoid:B4J5B3 Uniprot:B4J5B3
Length = 343
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 214/317 (67%), Positives = 254/317 (80%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C KAALKRPKT + +C++CF+ FE EIH IV ++LF+ GE++A+ ASGGKDST
Sbjct: 5 CKAKCGNKAALKRPKTGDALCKDCFFAAFEAEIHHTIVSSRLFRRGEKVAVAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYG
Sbjct: 65 VLAHVMKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++KRL YFSTEC+++PNAYRG
Sbjct: 185 TARLRRCTNIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKRLVYFSTECVFAPNAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE++RP I+DII SGE R + K P +G CERCG++SSQ+ CKACVLLE
Sbjct: 243 HARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTAKKPVRGICERCGFVSSQQPCKACVLLE 302
Query: 314 GLNRGLPKMGI-VRSRG 329
GLNRGLPK+GI +S+G
Sbjct: 303 GLNRGLPKLGIGKKSKG 319
>UNIPROTKB|B4KLL0 [details] [associations]
symbol:GI19452 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7230 "Drosophila mojavensis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH933808 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002004711.1 ProteinModelPortal:B4KLL0
EnsemblMetazoa:FBtr0170177 GeneID:6578808 KEGG:dmo:Dmoj_GI19452
FlyBase:FBgn0142190 InParanoid:B4KLL0 Uniprot:B4KLL0
Length = 343
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 213/314 (67%), Positives = 253/314 (80%)
Query: 19 CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLA 78
C R A+LKRPKT + +C++CF+ FE EIH I ++LF+ GE++A+ ASGGKDSTVLA
Sbjct: 9 CGNR-ASLKRPKTGDALCKDCFFAAFEAEIHHTITTSKLFRRGEKVAVAASGGKDSTVLA 67
Query: 79 FVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTM 138
VL LN RHNYGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGWTM
Sbjct: 68 HVLKLLNERHNYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTM 127
Query: 139 DEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIAR 198
D IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD AR
Sbjct: 128 DRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTAR 187
Query: 199 LSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAR 256
L RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG AR
Sbjct: 188 LRRCTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGHAR 245
Query: 257 EFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
F+KDLE++RP I+DII SGE R + K P +G CERCG++SSQ+ CKACVLLEGLN
Sbjct: 246 AFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGNCERCGFVSSQQPCKACVLLEGLN 305
Query: 317 RGLPKMGI-VRSRG 329
RGLPK+GI +S+G
Sbjct: 306 RGLPKLGIGKKSKG 319
>UNIPROTKB|B4NN33 [details] [associations]
symbol:GK22963 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7260 "Drosophila willistoni" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 KO:K14168 OMA:YEELYGW OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 EMBL:CH964282 RefSeq:XP_002074786.1
ProteinModelPortal:B4NN33 STRING:B4NN33 EnsemblMetazoa:FBtr0253614
GeneID:6652355 KEGG:dwi:Dwil_GK22963 FlyBase:FBgn0224925
InParanoid:B4NN33 Uniprot:B4NN33
Length = 343
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 214/316 (67%), Positives = 253/316 (80%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R A L+RPKT + +C+ECF+ FE EIH I NQLF+ G++IA+ ASGGKDSTV
Sbjct: 7 SQCGNR-AVLRRPKTGDALCKECFFAAFEAEIHHTISSNQLFQPGQKIAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN +HNYGLDL LLSIDEGISGYRDDSL+TVK+N Y + LKI+SY++LYGW
Sbjct: 66 LAHVLKLLNEKHNYGLDLVLLSIDEGISGYRDDSLETVKQNRDDYQMSLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL+VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLQVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I TG ED IPR KP KY+YEK+I+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTDIRTGGGEDS-IPRVKPLKYSYEKDIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K P +GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGTCSRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRG 329
LNRGLPK+GI +S+G
Sbjct: 304 LNRGLPKLGIGKKSKG 319
>UNIPROTKB|B3MI77 [details] [associations]
symbol:GF12710 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7217 "Drosophila ananassae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH902619 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_001959100.1 ProteinModelPortal:B3MI77
STRING:B3MI77 EnsemblMetazoa:FBtr0117410 GeneID:6495557
KEGG:dan:Dana_GF12710 FlyBase:FBgn0089744 InParanoid:B3MI77
Uniprot:B3MI77
Length = 343
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 214/316 (67%), Positives = 252/316 (79%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SRCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTDIKTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K P +G C RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRG 329
LNRGLPK+GI +S+G
Sbjct: 304 LNRGLPKLGIGKKSKG 319
>UNIPROTKB|Q28ZC1 [details] [associations]
symbol:GA20807 "Cytoplasmic tRNA 2-thiolation protein 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 EMBL:CM000071 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037 KO:K14168
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_001361116.2 ProteinModelPortal:Q28ZC1 GeneID:4804577
KEGG:dpo:Dpse_GA20807 FlyBase:FBgn0080797 InParanoid:Q28ZC1
Uniprot:Q28ZC1
Length = 343
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 212/327 (64%), Positives = 256/327 (78%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C + AALKRPKT + +C+ECF+ FE EIH I ++LF+ GE++A+ ASGGKDST
Sbjct: 5 CKAKCGKAAALKRPKTGDALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYG
Sbjct: 65 VLAHVMKLLNERHDYGLELVLLSIDEGITGYRDDSLETVKQNRDDYKMPLKILSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDRIVSQIGRSNNCTFCGVFRRQALDRGAKLLCVDSIATGHNADDIAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 185 TARLRRCTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE++RP I+DII SGE R + K P +GTC RCG+ISSQ+ CKACVLLE
Sbjct: 243 HARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLE 302
Query: 314 GLNRGLPKMGI-VRSRGQNNERTKDMK 339
GLNRGLPK+GI +S+G +D +
Sbjct: 303 GLNRGLPKLGIGKKSKGDRMIAKQDQE 329
>UNIPROTKB|B4GHY8 [details] [associations]
symbol:GL16852 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7234 "Drosophila persimilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CH479183
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002018269.1 ProteinModelPortal:B4GHY8
EnsemblMetazoa:FBtr0182467 GeneID:6592841 KEGG:dpe:Dper_GL16852
FlyBase:FBgn0154456 Uniprot:B4GHY8
Length = 343
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 212/327 (64%), Positives = 256/327 (78%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C + AALKRPKT + +C+ECF+ FE EIH I ++LF+ GE++A+ ASGGKDST
Sbjct: 5 CKAKCGKAAALKRPKTGDALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYG
Sbjct: 65 VLAHVMKLLNERHDYGLELVLLSIDEGITGYRDDSLETVKQNRDDYKMPLKILSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDRIVSQIGRSNNCTFCGVFRRQALDRGARLLCVDSIATGHNADDIAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
ARL RCT I TG ED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 185 TARLRRCTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE++RP I+DII SGE R + K P +GTC RCG+ISSQ+ CKACVLLE
Sbjct: 243 HARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLE 302
Query: 314 GLNRGLPKMGI-VRSRGQNNERTKDMK 339
GLNRGLPK+GI +S+G +D +
Sbjct: 303 GLNRGLPKLGIGKKSKGDRMIAKQDQE 329
>UNIPROTKB|B4LM02 [details] [associations]
symbol:GJ21203 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7244 "Drosophila virilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH940648 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OMA:YEELYGW
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_002048729.1 ProteinModelPortal:B4LM02 STRING:B4LM02
EnsemblMetazoa:FBtr0237128 GeneID:6626387 KEGG:dvi:Dvir_GJ21203
FlyBase:FBgn0208336 InParanoid:B4LM02 Uniprot:B4LM02
Length = 343
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 209/313 (66%), Positives = 250/313 (79%)
Query: 19 CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLA 78
C R A LKRPKT + +C+ CF+ FE EIH I+ ++LF+ GE++A+ ASGGKDSTVLA
Sbjct: 9 CGNR-ATLKRPKTGDALCKACFFAAFEAEIHHTIISSKLFRRGEKVAVAASGGKDSTVLA 67
Query: 79 FVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTM 138
VL LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGWTM
Sbjct: 68 HVLKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTM 127
Query: 139 DEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIAR 198
D IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD AR
Sbjct: 128 DRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTAR 187
Query: 199 LSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFARE 257
L RCT I TG + IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG AR
Sbjct: 188 LRRCTDIRTGGSEDSIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGHARA 246
Query: 258 FIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNR 317
F+KDLE++RP I+DII SGE R + K P +G CERC ++SSQ+ CKACVLLEGLNR
Sbjct: 247 FLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICERCSFVSSQQPCKACVLLEGLNR 306
Query: 318 GLPKMGI-VRSRG 329
GLPK+GI +S+G
Sbjct: 307 GLPKLGIGKKSKG 319
>POMBASE|SPBC2G5.03 [details] [associations]
symbol:ctu1 "cytosolic thiouridylase subunit Ctu1"
species:4896 "Schizosaccharomyces pombe" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0002143 "tRNA wobble position uridine thiolation"
evidence=IMP;IDA] [GO:0002144 "cytosolic tRNA wobble base
thiouridylase complex" evidence=IDA] [GO:0002182 "cytoplasmic
translational elongation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006450 "regulation of
translational fidelity" evidence=IMP] [GO:0008360 "regulation of
cell shape" evidence=IMP] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032447 "protein urmylation" evidence=ISO]
[GO:0034227 "tRNA thio-modification" evidence=ISS] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
PomBase:SPBC2G5.03 Pfam:PF01171 GO:GO:0005524 GO:GO:0008360
GO:GO:0016740 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
GenomeReviews:CU329671_GR GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002182 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
OrthoDB:EOG4M0J9F GO:GO:0032447 GO:GO:0002143 PIR:T40160
RefSeq:NP_596064.1 ProteinModelPortal:O94282 DIP:DIP-29900N
STRING:O94282 EnsemblFungi:SPBC2G5.03.1 GeneID:2540314
KEGG:spo:SPBC2G5.03 NextBio:20801443 GO:GO:0002144 GO:GO:0006450
Uniprot:O94282
Length = 335
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 205/319 (64%), Positives = 255/319 (79%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN+R+ AL RPKT ++IC+ECFY VFE EIH VI+ N+LF GER+ IGASGGKD
Sbjct: 4 KLCQLCNERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL+L+L+S+DEGI GYRDDSL TVKRN+ QYGLP+KIVSY DL
Sbjct: 64 STVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADL 123
Query: 134 Y-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
Y GWTMD +V IG KNNCT+CGVFRRQALDR A L + + TGHNADDIAET+L+N+L
Sbjct: 124 YDGWTMDNVVARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLL 183
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL R T ITT D P R KPFKY+YEKEI+ YA++K+LDYFSTEC YSP A+
Sbjct: 184 RGDVARLPRSTEITTQSDSSPTKRSKPFKYSYEKEIVL-YAHYKKLDYFSTECTYSPEAF 242
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKAC 309
RG AR IK LE +RP +ILDII SGE+ ++++S + +P+Q TCERCG+ISS + CKAC
Sbjct: 243 RGTARAMIKQLENIRPSSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
+LLEGLN+G+ +G+ R
Sbjct: 303 MLLEGLNKGITGLGLGSDR 321
>UNIPROTKB|Q16QI1 [details] [associations]
symbol:AAEL011283 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7159 "Aedes aegypti" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
EMBL:CH477747 RefSeq:XP_001661559.1 UniGene:Aae.17413
ProteinModelPortal:Q16QI1 STRING:Q16QI1
EnsemblMetazoa:AAEL011283-RA GeneID:5574642
KEGG:aag:AaeL_AAEL011283 VectorBase:AAEL011283 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW OrthoDB:EOG4C867X
PhylomeDB:Q16QI1 GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 Uniprot:Q16QI1
Length = 341
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 211/319 (66%), Positives = 249/319 (78%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+T RKA LKRPKT + +CRECF+ FE EIH I N+LF+ G+ +AI ASGGKDS
Sbjct: 4 LCTTGCSRKAFLKRPKTGDTLCRECFFLAFETEIHNTIEQNKLFRRGDVVAIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL L LLSIDEGI+GYRDDSL+TVKRN YG+ LKI+SY +LY
Sbjct: 64 TVLAHVLKVLNERYDYGLKLVLLSIDEGITGYRDDSLETVKRNRDDYGMELKILSYDELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV IG NNCTFCGVFRRQALDRGA L++VD +ATGHNADDIAETVL+NILRG
Sbjct: 124 GWTMDKIVSKIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVLMNILRG 183
Query: 195 DIARLSRCTLITTG-EDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
D ARL RC I TG +D IPR KP KY YEKEI+ YA+FK+L YFSTEC+++PNAYR
Sbjct: 184 DTARLRRCCDIKTGGKDADSIPRVKPLKYAYEKEIVM-YAHFKKLVYFSTECVFAPNAYR 242
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G AR F+KDLER+RP I+DII SGE + K P +G C RCG++SSQ+ CKACVLL
Sbjct: 243 GHARAFLKDLERIRPSVIMDIIHSGEQLSFKDTVKKPLRGKCNRCGFVSSQQPCKACVLL 302
Query: 313 EGLNRGLPKMGIVRSRGQN 331
EGLNRGLPK+G+ + N
Sbjct: 303 EGLNRGLPKLGVGKKSKAN 321
>UNIPROTKB|Q7Q9I4 [details] [associations]
symbol:AGAP005220 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7165 "Anopheles gambiae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
EMBL:AAAB01008900 eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168
OMA:YEELYGW OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 RefSeq:XP_314122.3
ProteinModelPortal:Q7Q9I4 STRING:Q7Q9I4
EnsemblMetazoa:AGAP005220-RA GeneID:1274928
KEGG:aga:AgaP_AGAP005220 VectorBase:AGAP005220 CTD:1274928
PhylomeDB:Q7Q9I4 InterPro:IPR020554 Uniprot:Q7Q9I4
Length = 342
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 206/317 (64%), Positives = 256/317 (80%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S+C R A ++RPKT + +C+ECF+ FE EIH I QLF+ GE++AI ASGGKDSTV
Sbjct: 7 SSCG-RNAFMRRPKTGDTLCKECFFLAFETEIHNTIQQEQLFRPGEKVAIAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA V++ LN+R+NYGLDL LLSIDEGI+GYRDDSL+TV +N YG+PL+++SY++LYGW
Sbjct: 66 LAHVMNLLNKRYNYGLDLVLLSIDEGITGYRDDSLKTVAQNRDDYGMPLRVLSYQELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA L++VD +ATGHNADDIAETV++NILRGD
Sbjct: 126 TMDRIVAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGDT 185
Query: 197 ARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RC I TG E IPR KP KY+YEKEI+ YA+FK+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCCDIKTGSKEADTIPRVKPLKYSYEKEIVM-YAHFKKLVYFSTECVFAPNAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP AI+DII +GE +I + K P +G C RCG++SSQ+ CKACVLLEG
Sbjct: 245 ARAFLKDLEKVRPSAIMDIIHAGEQLQIKGTVKKPVRGVCGRCGFVSSQQPCKACVLLEG 304
Query: 315 LNRGLPKMGI-VRSRGQ 330
LNRGLPK+GI +S+G+
Sbjct: 305 LNRGLPKLGIGKKSKGE 321
>UNIPROTKB|A8WR63 [details] [associations]
symbol:ctu-1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:6238 "Caenorhabditis briggsae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
EMBL:HE601298 RefSeq:XP_002634096.1 ProteinModelPortal:A8WR63
STRING:A8WR63 EnsemblMetazoa:CBG01646 GeneID:8576091
KEGG:cbr:CBG01646 CTD:8576091 WormBase:CBG01646 Uniprot:A8WR63
Length = 372
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 201/349 (57%), Positives = 261/349 (74%)
Query: 9 KKAGGRLCST---CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIA 65
K+ G C + C+ A +++ K Q+C CF + FE+++H+ I+ N LFK GER+A
Sbjct: 3 KRRGPPPCQSEEGCSN-SAKIRKAKNGAQLCGPCFSKSFEDDVHETIINNNLFKRGERVA 61
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IGASGGKDSTVLAFV+ LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL
Sbjct: 62 IGASGGKDSTVLAFVMKTLNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPL 121
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
I+SY DLYGWTMD+IV IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AE
Sbjct: 122 TILSYNDLYGWTMDDIVAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAE 181
Query: 186 TVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
TVL+N+LRGDIARL RCT I TGE+G +PR KP KY +E++I+ YA +L+YF TECI
Sbjct: 182 TVLMNVLRGDIARLERCTNIVTGEEGDLPRAKPLKYCFERDIVM-YARSNQLEYFYTECI 240
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
Y+PNAYRG+AR++++DLE++ PRAILD+I+SGE + +MP TCERCGY++SQK
Sbjct: 241 YAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQKM 300
Query: 306 CKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGT 354
CKAC+L+EGLN G +G+ +S+ + K + + +G K E CG+
Sbjct: 301 CKACLLIEGLNTGNTDLGVRKSK----KTKKVIVETEGGKK-EDGGCGS 344
>UNIPROTKB|A5DPQ4 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:294746 "Meyerozyma guilliermondii ATCC 6260" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 KO:K14168 GO:GO:0034227 InterPro:IPR011063
PROSITE:PS01263 InterPro:IPR020554 OrthoDB:EOG4M0J9F EMBL:CH408161
RefSeq:XP_001482235.1 ProteinModelPortal:A5DPQ4 STRING:A5DPQ4
GeneID:5124374 KEGG:pgu:PGUG_05255 Uniprot:A5DPQ4
Length = 369
Score = 965 (344.8 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 180/284 (63%), Positives = 226/284 (79%)
Query: 5 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI 64
E K +K LC C+Q KA +KRPK L+++C+ECFY VFE EIH IV QLFK G+++
Sbjct: 3 EKKIRKV--TLCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKV 60
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
AIGASGGKDSTVLA VL LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +P
Sbjct: 61 AIGASGGKDSTVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMP 120
Query: 125 LKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
L+I+SYKDLY W+MDEIV G++++CT+CGV RRQALDRGA+ L++D + TGHNADD+A
Sbjct: 121 LEIISYKDLYNWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMA 180
Query: 185 ETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
ETVL+N+LRGDIARL R C+++T+ E PI R KPFKYTY+KEI+ YA++K+LDYFSTE
Sbjct: 181 ETVLMNLLRGDIARLERSCSILTSSEGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTE 239
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK 287
C Y+P A+RG ARE +K LE +RP I+DII SGE+ ++ K
Sbjct: 240 CSYAPEAFRGTARELLKALESVRPSCIMDIIYSGEHLVVAHKKK 283
Score = 119 (46.9 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 286 TKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TK + CE+CGY+SS K CKACVLL GL PK+ I
Sbjct: 310 TKKTDGSRCEKCGYLSSNKICKACVLLAGLEMNRPKVNI 348
Score = 40 (19.1 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 333 ERTKDMKQNKGTKNIESK 350
+RT + +NK KNIE++
Sbjct: 283 KRTTEKYKNKPKKNIETE 300
>UNIPROTKB|Q755T1 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:284811 "Ashbya gossypii ATCC 10895" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0002098 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW GO:GO:0034227
InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
RefSeq:NP_985292.1 ProteinModelPortal:Q755T1 STRING:Q755T1
EnsemblFungi:AAS53116 GeneID:4621512 KEGG:ago:AGOS_AER437C
OrthoDB:EOG4M0J9F PhylomeDB:Q755T1 GO:GO:0032447 GO:GO:0002143
Uniprot:Q755T1
Length = 373
Score = 976 (348.6 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 182/291 (62%), Positives = 228/291 (78%)
Query: 8 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIG 67
+K G+LC C+ RKA +KRPK L+++C+ CF+ VFE EIH I+ N+LF+ GER+A+G
Sbjct: 12 AKVTAGQLCELCHARKALVKRPKNLQKVCKLCFFHVFETEIHNTIMENKLFQRGERVAVG 71
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
ASGGKDSTVLA++L LN RH+YGL++ LLSIDEGI GYRDDSL TVKRN+ QYGLPLKI
Sbjct: 72 ASGGKDSTVLAYILKLLNERHDYGLEIVLLSIDEGIVGYRDDSLATVKRNQEQYGLPLKI 131
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
VSYKDLY WTMDEIV G++N+CT+CGVFRRQALDRGA++L + + TGHNADD+AETV
Sbjct: 132 VSYKDLYDWTMDEIVACAGMRNSCTYCGVFRRQALDRGAAMLDIHHVVTGHNADDMAETV 191
Query: 188 LLNILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
L+NILRGD+ARL + T I T G P+ R KPFKY Y+KEI+ YA++K+LDYFSTEC Y
Sbjct: 192 LMNILRGDVARLEKSTAILTQSSGSPVKRSKPFKYAYQKEIVL-YAHYKKLDYFSTECSY 250
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM--PEQGTCE 295
+P A+RG ARE +K+LE +RP I+DII SGE R+ K P G+ E
Sbjct: 251 APEAFRGTARELMKNLEAVRPSCIIDIIHSGEALRLRPRPKKRAPPPGSVE 301
Score = 105 (42.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CERCGY+SS + CKAC+LLEGL + ++ I
Sbjct: 322 CERCGYLSSNRICKACMLLEGLEKNRARVQI 352
>UNIPROTKB|Q6CWX6 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:284590 "Kluyveromyces lactis NRRL Y-1140" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
OrthoDB:EOG4M0J9F EMBL:CR382122 RefSeq:XP_451563.1
ProteinModelPortal:Q6CWX6 STRING:Q6CWX6 GeneID:2897489
GenomeReviews:CR382122_GR KEGG:kla:KLLA0B00737g Uniprot:Q6CWX6
Length = 371
Score = 965 (344.8 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 181/278 (65%), Positives = 223/278 (80%)
Query: 7 KSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIA 65
KS K +LC C+ RKA +KRPK L++IC+ECF+ VFE EIH IV N LF GERIA
Sbjct: 10 KSVKVKVSQLCELCHARKAVMKRPKNLQRICKECFFSVFETEIHNTIVSNNLFHRGERIA 69
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
+GASGGKDSTVLA+VL LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL
Sbjct: 70 VGASGGKDSTVLAYVLKLLNDRHDYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPL 129
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
+IVSYKDLY WTMDEIV G++N+CT+CGVFRRQALDRGA+ L + + TGHNADD+AE
Sbjct: 130 EIVSYKDLYNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAE 189
Query: 186 TVLLNILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
TVL+NILRGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC
Sbjct: 190 TVLMNILRGDVARLEKSTSILTQSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTEC 248
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
Y+P A+RG ARE +K+LE +RP I+DII SGE+ ++
Sbjct: 249 SYAPEAFRGTARELMKNLEAIRPSCIIDIIHSGESLKL 286
Score = 113 (44.8 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 260 KDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
K ++ P + ++I G +S + + CERCGY+SS K CKAC+LLEGL +
Sbjct: 289 KRAKKAPPPSHMEIRPDGS---VSLQNEFIDGNRCERCGYLSSNKICKACMLLEGLEQNR 345
Query: 320 PKM 322
K+
Sbjct: 346 AKI 348
>UNIPROTKB|A2Q879 [details] [associations]
symbol:ncs6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:425011 "Aspergillus niger CBS 513.88" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GenomeReviews:AM270980_GR GO:GO:0000049
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037
HOGENOM:HOG000225864 GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 OrthoDB:EOG4M0J9F GO:GO:0032447
GO:GO:0002143 EMBL:AM269957 ProteinModelPortal:A2Q879
EnsemblFungi:CADANGAT00000331 Uniprot:A2Q879
Length = 341
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 199/321 (61%), Positives = 240/321 (74%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ ++A + RPK +++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL IVSY DLYG
Sbjct: 66 VLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ ++LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR IKDLE++RP +ILDI+KSGE+ + K GTCERCGYISSQ+ CKAC LLEG
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMALLKKVKSQVLGTCERCGYISSQRVCKACTLLEG 304
Query: 315 LNRGLPKMGIVRSRGQNNERT 335
LN+ PK I G +E +
Sbjct: 305 LNKNRPKTAIEMEIGLEDEES 325
>WB|WBGene00017928 [details] [associations]
symbol:tut-1 species:6239 "Caenorhabditis elegans"
[GO:0034227 "tRNA thio-modification" evidence=IEA;IMP] [GO:0000049
"tRNA binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0002098 "tRNA wobble uridine
modification" evidence=IGI;IMP] [GO:0006412 "translation"
evidence=IGI;IMP] [GO:0048598 "embryonic morphogenesis"
evidence=IGI] [GO:0040025 "vulval development" evidence=IGI]
[GO:0048599 "oocyte development" evidence=IGI] [GO:0007283
"spermatogenesis" evidence=IGI] [GO:0016783 "sulfurtransferase
activity" evidence=IMP] UniPathway:UPA00988 InterPro:IPR000541
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829
GO:GO:0005524 GO:GO:0006412 GO:GO:0048598 GO:GO:0007283
GO:GO:0006974 GO:GO:0000049 GO:GO:0040025 GO:GO:0048599
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098 EMBL:FO080227
GO:GO:0016783 eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168
OMA:YEELYGW GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269
PROSITE:PS01263 GeneTree:ENSGT00390000001041 PIR:T33145
RefSeq:NP_499865.1 ProteinModelPortal:O76365 STRING:O76365
PaxDb:O76365 EnsemblMetazoa:F29C4.6.1 EnsemblMetazoa:F29C4.6.2
EnsemblMetazoa:F29C4.6.3 GeneID:176826 KEGG:cel:CELE_F29C4.6
UCSC:F29C4.6.1 CTD:176826 WormBase:F29C4.6 InParanoid:O76365
NextBio:894178 Uniprot:O76365
Length = 373
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 196/337 (58%), Positives = 254/337 (75%)
Query: 9 KKAGGRLC---STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIA 65
K+ G C S C+ A +++ K Q+C CF FE+++H+ IV N+LFK GER+A
Sbjct: 3 KRRGPPPCQSGSGCSN-PAKIRKAKDGAQLCGPCFSRNFEDDVHEAIVNNKLFKRGERVA 61
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IGASGGKDSTVLA+V+ LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL
Sbjct: 62 IGASGGKDSTVLAYVMKTLNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPL 121
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
I+SY+DLYGWTMD+IV IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AE
Sbjct: 122 TILSYRDLYGWTMDDIVAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAE 181
Query: 186 TVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
T+L+N+LRGDIARL RCT I TGE+G +PR KP KY +E++I+ YA +L+YF TECI
Sbjct: 182 TLLMNVLRGDIARLERCTNIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTECI 240
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
Y+PNAYRG+AR++++DLE++ PRAILD+I+SGE + +MP CERCGY++SQK
Sbjct: 241 YAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVSVKKEVEMPTLKICERCGYMTSQKL 300
Query: 306 CKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNK 342
CKAC+L+EGLN G +G+ +S+ + + NK
Sbjct: 301 CKACLLIEGLNTGNTDLGVRKSKKSKKVTVEADELNK 337
>UNIPROTKB|O76365 [details] [associations]
symbol:tut-1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:6239 "Caenorhabditis elegans" [GO:0005829 "cytosol"
evidence=ISS] [GO:0000049 "tRNA binding" evidence=ISS] [GO:0034227
"tRNA thio-modification" evidence=ISS] [GO:0002098 "tRNA wobble
uridine modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0006412
GO:GO:0048598 GO:GO:0007283 GO:GO:0006974 GO:GO:0000049
GO:GO:0040025 GO:GO:0048599 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 EMBL:FO080227 GO:GO:0016783 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
GeneTree:ENSGT00390000001041 PIR:T33145 RefSeq:NP_499865.1
ProteinModelPortal:O76365 STRING:O76365 PaxDb:O76365
EnsemblMetazoa:F29C4.6.1 EnsemblMetazoa:F29C4.6.2
EnsemblMetazoa:F29C4.6.3 GeneID:176826 KEGG:cel:CELE_F29C4.6
UCSC:F29C4.6.1 CTD:176826 WormBase:F29C4.6 InParanoid:O76365
NextBio:894178 Uniprot:O76365
Length = 373
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 196/337 (58%), Positives = 254/337 (75%)
Query: 9 KKAGGRLC---STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIA 65
K+ G C S C+ A +++ K Q+C CF FE+++H+ IV N+LFK GER+A
Sbjct: 3 KRRGPPPCQSGSGCSN-PAKIRKAKDGAQLCGPCFSRNFEDDVHEAIVNNKLFKRGERVA 61
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IGASGGKDSTVLA+V+ LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL
Sbjct: 62 IGASGGKDSTVLAYVMKTLNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPL 121
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
I+SY+DLYGWTMD+IV IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AE
Sbjct: 122 TILSYRDLYGWTMDDIVAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAE 181
Query: 186 TVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
T+L+N+LRGDIARL RCT I TGE+G +PR KP KY +E++I+ YA +L+YF TECI
Sbjct: 182 TLLMNVLRGDIARLERCTNIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTECI 240
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
Y+PNAYRG+AR++++DLE++ PRAILD+I+SGE + +MP CERCGY++SQK
Sbjct: 241 YAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVSVKKEVEMPTLKICERCGYMTSQKL 300
Query: 306 CKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNK 342
CKAC+L+EGLN G +G+ +S+ + + NK
Sbjct: 301 CKACLLIEGLNTGNTDLGVRKSKKSKKVTVEADELNK 337
>UNIPROTKB|Q6FMB5 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:284593 "Candida glabrata CBS 138" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 OrthoDB:EOG4M0J9F EMBL:CR380957
RefSeq:XP_448629.1 ProteinModelPortal:Q6FMB5 GeneID:2890261
GenomeReviews:CR380957_GR KEGG:cgr:CAGL0K09416g Uniprot:Q6FMB5
Length = 358
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 199/319 (62%), Positives = 246/319 (77%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA L+RPK L++IC+ECFY VFE EIH IV N LF+ GE++AIGASGGKD
Sbjct: 20 QLCELCHGRKAVLRRPKNLQKICKECFYYVFETEIHNTIVSNNLFQRGEKVAIGASGGKD 79
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN RH+YG+ L LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS++DL
Sbjct: 80 STVLAHILKLLNDRHDYGVKLVLLSIDEGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDL 139
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV + G++N+CT+CGVFRRQALDRGA+ L ++ + TGHNADD+AETVL+NILR
Sbjct: 140 YDWTMDEIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAETVLMNILR 199
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL R T I T G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+R
Sbjct: 200 GDVARLERSTAIITQSAGSPIRRSKPFKYCYQKEIVL-YAHYKKLDYFSTECTYAPEAFR 258
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP------EQGT-CERCGYISSQKW 305
G ARE +K+LE +RP I+DII+SGEN + + P + G CERCGY+SS K
Sbjct: 259 GTARELMKNLEAVRPSCIIDIIQSGENLVLKKKKRHPNSKVEFKDGNRCERCGYLSSNKI 318
Query: 306 CKACVLLEGLNRGLPKMGI 324
CKAC+LL+GL + M I
Sbjct: 319 CKACMLLQGLEKNRASMSI 337
>UNIPROTKB|Q6C8R5 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:284591 "Yarrowia lipolytica CLIB122" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
OrthoDB:EOG4M0J9F EMBL:CR382130 RefSeq:XP_502947.1
ProteinModelPortal:Q6C8R5 STRING:Q6C8R5 GeneID:2911306
GenomeReviews:CR382130_GR KEGG:yli:YALI0D17600g Uniprot:Q6C8R5
Length = 365
Score = 948 (338.8 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 179/280 (63%), Positives = 217/280 (77%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C RKA LKRPKTL+ IC+ CFY VFE EIH IV + LF GER+AIGASGGKDS
Sbjct: 2 LCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYG+D LLSIDEGI GYRDDSL+TVKRN++QY + L++VSY +LY
Sbjct: 62 TVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELY 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD+IV IG KNNCT+CGVFRRQALDRG++ L + I TGHNADD+AETVL+N+LRG
Sbjct: 122 GWSMDQIVAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLLRG 181
Query: 195 DIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D ARL RCT + TG +D P+ R KP KY YEKEI+ YA++K+LDYFSTEC YSP A+RG
Sbjct: 182 DTARLDRCTELVTGSDDSPVKRSKPLKYAYEKEIVL-YAHYKKLDYFSTECTYSPEAFRG 240
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
AR IK+LE +RP I+DII SGE F + + +G+
Sbjct: 241 TARTLIKNLEAIRPSTIIDIIHSGEAFVLKKKKEKKGKGS 280
Score = 107 (42.7 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
C +CGY+S CKACVLLEGLN G KM I
Sbjct: 313 CTKCGYLSHNAVCKACVLLEGLNAGRAKMQI 343
>UNIPROTKB|A3GGB3 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:322104 "Scheffersomyces stipitis CBS 6054" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
OrthoDB:EOG4M0J9F EMBL:AAVQ01000001 RefSeq:XP_001387923.2
ProteinModelPortal:A3GGB3 STRING:A3GGB3 GeneID:4851312
GenomeReviews:CM000437_GR KEGG:pic:PICST_39100 Uniprot:A3GGB3
Length = 376
Score = 934 (333.8 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 173/287 (60%), Positives = 223/287 (77%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
E++ K K + LC C+ RKA +KRPK L+++C++CFY+VFE EIH IV +LF G
Sbjct: 3 EISAKKVKVSA--LCELCHARKAVMKRPKNLQKLCKDCFYKVFETEIHNTIVDAKLFSPG 60
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+++AIGASGGKDSTVLA VL LN R++YGL L LLSIDEGI GYRDDSL TVKRN++QY
Sbjct: 61 DKVAIGASGGKDSTVLASVLKTLNERYDYGLILVLLSIDEGIKGYRDDSLATVKRNQVQY 120
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+PL+I+SY+DLY WTMDEIV G++++CT+CGV RRQALDRGA+ L ++ + TGHNAD
Sbjct: 121 EMPLEIISYRDLYNWTMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNAD 180
Query: 182 DIAETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N+LRGD ARL + C +IT PI R KPFKYTY+KEI+ YA++K+LDYF
Sbjct: 181 DMAETVLMNLLRGDTARLEKSCAIITQSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYF 239
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK 287
STEC Y+P A+RG ARE +K LE +RP I+DII SGE+ ++ K
Sbjct: 240 STECTYAPEAFRGTARELLKSLESIRPSCIMDIIYSGEHLVLAPKKK 286
Score = 101 (40.6 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 287 KMPEQGT-CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K E G CE+CGY+SS + CKAC+LL GL K+ I
Sbjct: 317 KQFEDGNRCEKCGYLSSNRICKACMLLAGLEMNRAKVSI 355
>UNIPROTKB|A7TER7 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:436907 "Vanderwaltozyma polyspora DSM 70294" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 OrthoDB:EOG4M0J9F EMBL:DS480381
RefSeq:XP_001647021.1 ProteinModelPortal:A7TER7 STRING:A7TER7
GeneID:5547494 KEGG:vpo:Kpol_1050p20 Uniprot:A7TER7
Length = 363
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 191/321 (59%), Positives = 244/321 (76%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA ++RPK L++IC+ CF+ VFE EIH+ IV N LF GER+A+GASGGKD
Sbjct: 19 QLCELCHSRKAIIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGASGGKD 78
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+VL LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+I SY+DL
Sbjct: 79 STVLAYVLKLLNERHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDL 138
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMD+IV+ G++N+CT+CGV RRQALDRGA+ L++ + TGHNADD+AETVL+NILR
Sbjct: 139 YDWTMDDIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAETVLMNILR 198
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+R
Sbjct: 199 GDVARLEKSTSIMTSSTGSPIKRSKPFKYCYQKEIVL-YAHYKKLDYFSTECTYAPEAFR 257
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENF----RISTSTKMP-----EQGTCERCGYISSQ 303
G ARE +K+ E +RP I+DII SGE+F ++ K + CERCGY+SS
Sbjct: 258 GTARELMKNFEAIRPSCIIDIIASGESFVLKQKMGKQNKKKIITYNDGNRCERCGYLSSN 317
Query: 304 KWCKACVLLEGLNRGLPKMGI 324
K CKAC+LLEGL + ++ I
Sbjct: 318 KICKACMLLEGLEKSRAQIKI 338
>CGD|CAL0003670 [details] [associations]
symbol:orf19.4634 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0002144 "cytosolic tRNA wobble
base thiouridylase complex" evidence=IEA] [GO:0032447 "protein
urmylation" evidence=IEA] [GO:0002143 "tRNA wobble position uridine
thiolation" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
CGD:CAL0003670 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 EMBL:AACQ01000005 EMBL:AACQ01000006
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037
KO:K14168 GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_722706.1 RefSeq:XP_722852.1
ProteinModelPortal:Q5AML2 STRING:Q5AML2 GeneID:3635434
GeneID:3635617 KEGG:cal:CaO19.12104 KEGG:cal:CaO19.4634
Uniprot:Q5AML2
Length = 395
Score = 928 (331.7 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 174/279 (62%), Positives = 215/279 (77%)
Query: 3 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
+ S KK LC C+ RKA +KRPK L ++C+ECFY +FE EIH I+ N LF G
Sbjct: 8 IINSSVKKIKLSALCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNDLFYRG 67
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E+IAIGASGGKDSTVLA +L LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY
Sbjct: 68 EKIAIGASGGKDSTVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQY 127
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+PL+IVSYKDLY W+MDEIV G++++CT+CGV RRQALDRGA L + + TGHNAD
Sbjct: 128 DMPLEIVSYKDLYNWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNAD 187
Query: 182 DIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N+LRGD+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYF
Sbjct: 188 DVAETVLMNLLRGDVARLESSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYF 246
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
STEC Y+P A+RG ARE +K LE +RP I+DII SGE+
Sbjct: 247 STECTYAPEAFRGTARELLKSLESIRPSCIMDIIYSGEH 285
Score = 103 (41.3 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 293 TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TCE+CGY+SS K CKAC+LL GL K+ I
Sbjct: 343 TCEKCGYLSSNKICKACMLLNGLEINRAKVTI 374
>UNIPROTKB|Q5AML2 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:237561 "Candida albicans SC5314" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR012089 PIRSF:PIRSF004976 CGD:CAL0003670 Pfam:PF01171
GO:GO:0005829 GO:GO:0005524 GO:GO:0016740 GO:GO:0000049
EMBL:AACQ01000005 EMBL:AACQ01000006 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037 KO:K14168
GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_722706.1 RefSeq:XP_722852.1 ProteinModelPortal:Q5AML2
STRING:Q5AML2 GeneID:3635434 GeneID:3635617 KEGG:cal:CaO19.12104
KEGG:cal:CaO19.4634 Uniprot:Q5AML2
Length = 395
Score = 928 (331.7 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 174/279 (62%), Positives = 215/279 (77%)
Query: 3 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
+ S KK LC C+ RKA +KRPK L ++C+ECFY +FE EIH I+ N LF G
Sbjct: 8 IINSSVKKIKLSALCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNDLFYRG 67
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E+IAIGASGGKDSTVLA +L LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY
Sbjct: 68 EKIAIGASGGKDSTVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQY 127
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+PL+IVSYKDLY W+MDEIV G++++CT+CGV RRQALDRGA L + + TGHNAD
Sbjct: 128 DMPLEIVSYKDLYNWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNAD 187
Query: 182 DIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N+LRGD+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYF
Sbjct: 188 DVAETVLMNLLRGDVARLESSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYF 246
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
STEC Y+P A+RG ARE +K LE +RP I+DII SGE+
Sbjct: 247 STECTYAPEAFRGTARELLKSLESIRPSCIMDIIYSGEH 285
Score = 103 (41.3 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 293 TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TCE+CGY+SS K CKAC+LL GL K+ I
Sbjct: 343 TCEKCGYLSSNKICKACMLLNGLEINRAKVTI 374
>UNIPROTKB|B5RV24 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:284592 "Debaryomyces hansenii CBS767" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263 InterPro:IPR020554
OrthoDB:EOG4M0J9F EMBL:CR382139 RefSeq:XP_002770568.1
ProteinModelPortal:B5RV24 STRING:B5RV24 GeneID:8999114
GenomeReviews:CR382139_GR KEGG:dha:DEHA2G02728g Uniprot:B5RV24
Length = 377
Score = 927 (331.4 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 173/291 (59%), Positives = 222/291 (76%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
+VA K K + LC CN RKA +KRPK L+++C+ECFY VFE EIH I LF+ G
Sbjct: 5 KVATKKIKLSA--LCELCNGRKAVMKRPKNLQKLCKECFYNVFETEIHNTIADANLFQPG 62
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+++AIGASGGKDSTVLA VL LN R++Y L+L LLSIDEGI GYRDDSL TVKRN+ QY
Sbjct: 63 DKVAIGASGGKDSTVLASVLKTLNERYDYRLELVLLSIDEGIKGYRDDSLATVKRNQAQY 122
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+ L+I+SYKDLY W+MDEIV G++++CT+CGV RRQALDRGA+ L ++ + TGHNAD
Sbjct: 123 NMALEIISYKDLYNWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNAD 182
Query: 182 DIAETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N+LRGD ARL + CT++T PI R KPFKY+Y+KEI+ YA++K+LDYF
Sbjct: 183 DMAETVLMNLLRGDTARLEKSCTILTQSTGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYF 241
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ 291
STEC Y+P A+RG ARE +K LE +RP I+DII SGE+ ++ K +Q
Sbjct: 242 STECSYAPEAFRGTARELLKSLEAIRPSCIMDIIYSGEHLALAPKKKRTQQ 292
Score = 102 (41.0 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 282 ISTSTKMPEQGT-CERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNN--ERTKDM 338
I+ T+ + G CE CGY++S K CKACVLL GL K+ + + + + TK +
Sbjct: 313 ITIGTREFKDGNRCENCGYLTSNKICKACVLLAGLEMNRAKVSVDNNTAVDGAAKLTKTL 372
Query: 339 KQ 340
+Q
Sbjct: 373 EQ 374
>SGD|S000003179 [details] [associations]
symbol:NCS6 "Protein required for uridine thiolation at the
wobble position of Gln" species:4932 "Saccharomyces cerevisiae"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0000049 "tRNA
binding" evidence=IEA;IDA] [GO:0002143 "tRNA wobble position
uridine thiolation" evidence=IMP] [GO:0032447 "protein urmylation"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR012089
PIRSF:PIRSF004976 SGD:S000003179 Pfam:PF01171 GO:GO:0005829
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0000049
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016779 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW InterPro:IPR011063
PROSITE:PS01263 InterPro:IPR020554 OrthoDB:EOG4M0J9F GO:GO:0032447
GO:GO:0002143 GeneTree:ENSGT00390000001041 EMBL:U33754 EMBL:Z72733
PIR:S71668 RefSeq:NP_011304.2 ProteinModelPortal:P53088 SMR:P53088
DIP:DIP-7935N IntAct:P53088 MINT:MINT-4084039 STRING:P53088
PaxDb:P53088 PeptideAtlas:P53088 EnsemblFungi:YGL211W GeneID:852661
KEGG:sce:YGL211W CYGD:YGL211w NextBio:971945 Genevestigator:P53088
GermOnline:YGL211W Uniprot:P53088
Length = 359
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 188/320 (58%), Positives = 242/320 (75%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GE++A+GASGGKD
Sbjct: 20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKD 79
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDL
Sbjct: 80 STVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDL 139
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILR
Sbjct: 140 YDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILR 199
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+R
Sbjct: 200 GDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFR 258
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQK 304
G ARE++K+LE +RP I+DII+SGEN + K + C RCGY+SS
Sbjct: 259 GTAREYMKNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNN 318
Query: 305 WCKACVLLEGLNRGLPKMGI 324
CKAC+LLEGL + ++ I
Sbjct: 319 ICKACMLLEGLEKSRAQVAI 338
>ASPGD|ASPL0000059529 [details] [associations]
symbol:AN0450 species:162425 "Emericella nidulans"
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0032447 "protein urmylation" evidence=IEA] [GO:0002143 "tRNA
wobble position uridine thiolation" evidence=IEA] [GO:0006450
"regulation of translational fidelity" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0071276 "cellular
response to cadmium ion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0002144 "cytosolic tRNA wobble base thiouridylase
complex" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
Pfam:PF01171 GO:GO:0005829 EMBL:BN001308 EMBL:AACD01000007
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 InterPro:IPR011063 OrthoDB:EOG4M0J9F
GO:GO:0032447 GO:GO:0002143 OMA:ECIYSPE RefSeq:XP_658054.1
ProteinModelPortal:Q5BG80 STRING:Q5BG80
EnsemblFungi:CADANIAT00002245 GeneID:2876226 KEGG:ani:AN0450.2
Uniprot:Q5BG80
Length = 422
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 186/337 (55%), Positives = 227/337 (67%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C + +A + RPK ++CRECF EVFE E+H+ I N LF GERIAIGASGGKDS
Sbjct: 5 LCFKCQKERAVIIRPKNRHKLCRECFLEVFETEVHETITSNSLFHPGERIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+ YGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL IV Y +LY
Sbjct: 65 TVLASVLKTLNERYEYGLDLCLLSIDEGIRGYRDDSLETVKRNAVQYNMPLVIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVEQIGKKGNCTYCGVFRRQALDRGAERLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHKQLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR IKDLE++RP +ILDI++SGE + + + G G C
Sbjct: 244 SARTLIKDLEKIRPSSILDIVRSGEEMAVLVP--ITDGGQAAAAGEAEDVSTIGGCGSQS 301
Query: 314 GLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESK 350
G RG G+ E K + QN+ +E++
Sbjct: 302 GRTRG----------GEMAEMEKSLAQNEAAAELETE 328
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGYISSQ+ C AC LLEGLN+ PK I
Sbjct: 364 GKCERCGYISSQRTCHACTLLEGLNKNRPKAAI 396
>UNIPROTKB|G4MSW4 [details] [associations]
symbol:MGG_04613 "ATP-binding domain-containing protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 Gene3D:3.40.50.620
InterPro:IPR014729 EMBL:CM001232 KO:K14168 InterPro:IPR011063
PROSITE:PS01263 InterPro:IPR020554 GO:GO:0032447 GO:GO:0002143
RefSeq:XP_003713625.1 ProteinModelPortal:G4MSW4
EnsemblFungi:MGG_04613T0 GeneID:2677999 KEGG:mgr:MGG_04613
Uniprot:G4MSW4
Length = 412
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 179/345 (51%), Positives = 241/345 (69%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A +KRPK ++C++CF ++FE+E+H I + LF GER+AIGASGGKDS
Sbjct: 5 LCVLCGTERALIKRPKNHHKLCKKCFIQIFEDEVHHTITSSNLFTPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+ YGL+L LLS+DEGI GYRDDSL+TVKRN +QY +PLKIV Y +LY
Sbjct: 65 TVLASVLKTLNERYKYGLELVLLSVDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ +G K NCT+CG+FRRQALDRGA +L + + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWTMDQVVETVGKKGNCTYCGIFRRQALDRGAKVLDIKHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
D+ARLSR T I TG + + R KP KY YEKEI+ YA+ K+LDYFSTEC+YSP A
Sbjct: 185 DLARLSRSTNIMTGANSALSDNVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECLYSPEA 243
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGTCERCGYISSQKWCKA- 308
+RG AR IK+LE++RP AILDI++SGE+ R+ S C G ++Q++ +
Sbjct: 244 FRGSARSLIKNLEKVRPSAILDIVRSGEDMARLVPSEISGSSCACNGEGE-ATQEYPEGE 302
Query: 309 ---CVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESK 350
C G + G +M + +R + N+ + ++ + G + K
Sbjct: 303 PGGCGSANGRSSG-GEMAEMEARLRKNQDSAALEVDVGALENQKK 346
>UNIPROTKB|A5E3Q3 [details] [associations]
symbol:NCS6 "Cytoplasmic tRNA 2-thiolation protein 1"
species:379508 "Lodderomyces elongisporus NRRL YB-4239" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 KO:K14168 OMA:YEELYGW GO:GO:0034227
InterPro:IPR011063 PROSITE:PS01263 OrthoDB:EOG4M0J9F EMBL:CH981529
RefSeq:XP_001524270.1 ProteinModelPortal:A5E3Q3 STRING:A5E3Q3
GeneID:5231602 KEGG:lel:LELG_04241 Uniprot:A5E3Q3
Length = 379
Score = 789 (282.8 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 158/289 (54%), Positives = 200/289 (69%)
Query: 3 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF--- 58
V S +KK LC C+ RKA +KRPK L ++C+ECF+ VFE E+H IV N+LF
Sbjct: 2 VESSNTKKVKVSSLCELCHGRKAVMKRPKNLRKLCKECFFHVFETEVHNTIVENKLFANV 61
Query: 59 ---KAGER--IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQT 113
+ ER +AIGASGGKDSTVLA V+ LN R+NYGL L LL IDEGI GYRD SL+T
Sbjct: 62 ENSEFPERRAVAIGASGGKDSTVLASVMKTLNERYNYGLKLVLLCIDEGIKGYRDHSLET 121
Query: 114 VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
VK N+ +Y +PL+I+SYKDLY WTMDE+V G++++CT+CGV RRQALD+GA L ++
Sbjct: 122 VKMNQKEYDMPLEILSYKDLYDWTMDEVVSCAGIRSSCTYCGVLRRQALDKGAEKLGINH 181
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYA 232
I TGHNADD+AETVLLN+LRGDI R+ T +IT E+ I R KPF Y +KEI+ YA
Sbjct: 182 IVTGHNADDMAETVLLNLLRGDINRIENSTKIITDSENSVIQRSKPFAYMSQKEIVL-YA 240
Query: 233 YFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
++K L YFSTEC YS A+RG R L + P + I SG+ F+
Sbjct: 241 HYKNLTYFSTECTYSEEAFRGECRSLFHSLSAVLPSVHTNTIYSGQQFK 289
Score = 74 (31.1 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 290 EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
E C++CG ++S C+AC LL GL K+ I
Sbjct: 326 ESKRCKKCGSLASNDLCQACFLLAGLEVSRAKVSI 360
>MGI|MGI:2385277 [details] [associations]
symbol:Ctu1 "cytosolic thiouridylase subunit 1 homolog (S.
pombe)" species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
UniPathway:UPA00988 MGI:MGI:2385277 Pfam:PF01171 GO:GO:0005829
GO:GO:0005739 GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037
HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW GO:GO:0034227
InterPro:IPR011063 PROSITE:PS01263 CTD:90353
GeneTree:ENSGT00390000001041 HOVERGEN:HBG100428 OrthoDB:EOG4SBF02
EMBL:AK155284 EMBL:BC005752 IPI:IPI00114822 RefSeq:NP_663557.1
UniGene:Mm.26514 ProteinModelPortal:Q99J10 SMR:Q99J10 STRING:Q99J10
PhosphoSite:Q99J10 PaxDb:Q99J10 PRIDE:Q99J10
Ensembl:ENSMUST00000038332 GeneID:233189 KEGG:mmu:233189
UCSC:uc009gnh.1 InParanoid:Q99J10 NextBio:381599 Bgee:Q99J10
CleanEx:MM_ATPBD3 Genevestigator:Q99J10 Uniprot:Q99J10
Length = 420
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 156/320 (48%), Positives = 222/320 (69%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEI-HQVIVGNQLFKAGERIAIGASGGKDS 74
C +C++ +AAL+RP++ + +C CF FE E+ H V+ G+ L G +A+GASGGKDS
Sbjct: 6 CFSCHKTRAALRRPRSGQALCGSCFCAAFEAEVLHTVLAGH-LLPPGAVVAVGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+
Sbjct: 65 TVLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLF 122
Query: 135 G-WTMDEIVK-VIGL---KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G WTMD + + G ++ CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+
Sbjct: 123 GGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLM 182
Query: 190 NILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
N LRGD RL+R ++ +TGE +PRC+P ++ +KE++ YA+F+ L YFS EC+Y+P
Sbjct: 183 NFLRGDAGRLARGGVLGSTGEGCALPRCRPLQFASQKEVVL-YAHFRHLRYFSEECVYAP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
A+RG AR+ +K LE RP A+LD++ S E ++ + K P GTC RCG ++S K C+A
Sbjct: 242 EAFRGHARDLLKLLEAARPSAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQA 301
Query: 309 CVLLEGLNRGLPKMGIVRSR 328
C LL+GLNRGLP++ I + R
Sbjct: 302 CALLDGLNRGLPRLAIGKGR 321
>RGD|1308740 [details] [associations]
symbol:Ctu1 "cytosolic thiouridylase subunit 1 homolog (S.
pombe)" species:10116 "Rattus norvegicus" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 RGD:1308740 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 EMBL:CH473979 eggNOG:COG0037 HOGENOM:HOG000225864
KO:K14168 GO:GO:0034227 InterPro:IPR011063 PROSITE:PS01263
CTD:90353 GeneTree:ENSGT00390000001041 OrthoDB:EOG4SBF02
EMBL:BC161898 IPI:IPI00367502 RefSeq:NP_001099721.1
UniGene:Rn.104880 ProteinModelPortal:B1WBV0 STRING:B1WBV0
Ensembl:ENSRNOT00000024690 GeneID:292847 KEGG:rno:292847
UCSC:RGD:1308740 NextBio:634897 Genevestigator:B1WBV0
Uniprot:B1WBV0
Length = 382
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 153/319 (47%), Positives = 220/319 (68%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C +C++ +AAL+RP++ + +C CF FE E+ + ++ L G +A+GASGGKDST
Sbjct: 6 CFSCHKARAALRRPRSGQALCGPCFCAAFEAEVLRTVLAGHLLPQGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+G
Sbjct: 66 VLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFG 123
Query: 136 -WTMDEIVK-VIGL---KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + G ++ CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R ++ +TGE +PRC+P ++ +KE++ YA+F+ L YFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGVLGSTGEGCALPRCRPLQFASQKEVVL-YAHFRHLRYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + K P GTC RCG ++S K C+AC
Sbjct: 243 AFRGHARDLLKLLEAARPSAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASNKLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRGLP++ I + R
Sbjct: 303 ALLDGLNRGLPRLAIGKGR 321
>UNIPROTKB|Q0VC66 [details] [associations]
symbol:CTU1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:9913 "Bos taurus" [GO:0034227 "tRNA thio-modification"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 GO:GO:0034227
InterPro:IPR011063 PROSITE:PS01263 EMBL:BC120329 IPI:IPI00697345
RefSeq:NP_001071422.1 UniGene:Bt.60927 ProteinModelPortal:Q0VC66
Ensembl:ENSBTAT00000055031 GeneID:522824 KEGG:bta:522824 CTD:90353
GeneTree:ENSGT00390000001041 HOVERGEN:HBG100428 InParanoid:Q0VC66
OMA:NITTGHE OrthoDB:EOG4SBF02 NextBio:20873598 Uniprot:Q0VC66
Length = 347
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 154/325 (47%), Positives = 220/325 (67%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDST
Sbjct: 6 CASCHKARAALRRPRSGQALCGSCFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFG 123
Query: 136 -WTMDEIVK-VIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + G + CTFCGV RR+AL+ GA L+ + TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R L + GE G +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKMLEAARPSAVLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR-GQNNE 333
LL+GLNRG P++ I + R G + E
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEE 327
>UNIPROTKB|E1BII1 [details] [associations]
symbol:LOC100297056 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 KO:K14168 InterPro:IPR011063
GeneTree:ENSGT00390000001041 OMA:ECIYSPE EMBL:DAAA02047541
IPI:IPI00826481 RefSeq:XP_002695276.1 RefSeq:XP_002701984.1
Ensembl:ENSBTAT00000031796 GeneID:100297056 KEGG:bta:100297056
Uniprot:E1BII1
Length = 347
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 154/325 (47%), Positives = 220/325 (67%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDST
Sbjct: 6 CASCHKARAALRRPRSGQALCGACFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFG 123
Query: 136 -WTMDEIVK-VIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + G + CTFCGV RR+AL+ GA L+ + TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R L + GE G +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKMLEAARPSAVLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR-GQNNE 333
LL+GLNRG P++ I + R G + E
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEE 327
>UNIPROTKB|Q7Z7A3 [details] [associations]
symbol:CTU1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0002098 "tRNA wobble uridine modification" evidence=NAS]
[GO:0034227 "tRNA thio-modification" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH471135 GO:GO:0002098 eggNOG:COG0037 HOGENOM:HOG000225864
KO:K14168 OMA:YEELYGW GO:GO:0034227 InterPro:IPR011063
PROSITE:PS01263 CTD:90353 HOVERGEN:HBG100428 OrthoDB:EOG4SBF02
EMBL:AY279382 EMBL:AK291173 EMBL:BC009037 IPI:IPI00062882
RefSeq:NP_660275.2 UniGene:Hs.148425 ProteinModelPortal:Q7Z7A3
SMR:Q7Z7A3 DIP:DIP-48632N STRING:Q7Z7A3 PhosphoSite:Q7Z7A3
DMDM:74713747 PaxDb:Q7Z7A3 PRIDE:Q7Z7A3 Ensembl:ENST00000421832
GeneID:90353 KEGG:hsa:90353 UCSC:uc010eop.3 GeneCards:GC19M051601
H-InvDB:HIX0015377 H-InvDB:HIX0137480 HGNC:HGNC:29590 MIM:612694
neXtProt:NX_Q7Z7A3 PharmGKB:PA165393368 InParanoid:Q7Z7A3
GenomeRNAi:90353 NextBio:76697 Bgee:Q7Z7A3 CleanEx:HS_ATPBD3
Genevestigator:Q7Z7A3 Uniprot:Q7Z7A3
Length = 348
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 153/327 (46%), Positives = 220/327 (67%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVK-VIGL---KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + G ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R L + GE G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR-GQNNERT 335
LL+GLNRG P++ I + R G + E T
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEAT 329
>UNIPROTKB|F1RP87 [details] [associations]
symbol:LOC100516084 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 OMA:YEELYGW
InterPro:IPR011063 EMBL:CU019573 Ensembl:ENSSSCT00000003594
Uniprot:F1RP87
Length = 294
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 137/274 (50%), Positives = 188/274 (68%)
Query: 67 GASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLK 126
GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL
Sbjct: 2 GASGGKDSTVLAHVLRELAPR--LGISLRLVAVDEGIGGYRDAALAAVRRQAARWELPLT 59
Query: 127 IVSYKDLYG-WTMDEIVK-VIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+V+Y DL+G WTMD + + G + CTFCGV RR+AL+ GA L+ + TGHNAD
Sbjct: 60 VVAYADLFGGWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNAD 119
Query: 182 DIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N LRGD RL+R L + GE G +PRC+P + +KE++ YA+F+RLDYF
Sbjct: 120 DMAETVLMNFLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYF 178
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
S EC+Y+P A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG +
Sbjct: 179 SEECVYAPEAFRGHARDLLKQLEAARPSAVLDLVHSAERLALAPAARPPPPGACSRCGAL 238
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSR-GQNNE 333
+S+ C+AC LL+GLNRG P++ I + R G + E
Sbjct: 239 ASRALCQACALLDGLNRGRPRLAIGKGRRGLDEE 272
>UNIPROTKB|F1Q1N7 [details] [associations]
symbol:CTU1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 InterPro:IPR011063
GeneTree:ENSGT00390000001041 OMA:NITTGHE EMBL:AAEX03000770
Ensembl:ENSCAFT00000004597 Uniprot:F1Q1N7
Length = 238
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 116/236 (49%), Positives = 158/236 (66%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C+ +AAL+RP++ + +C CF FE E+ + +L G +A+GASGGKDST
Sbjct: 6 CSSCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVQAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R + LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGVSLRLVAVDEGIGGYRDAALAAVRRQAALWDLPLTVVAYADLFG 123
Query: 136 -WTMDEIVK-VIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + G + CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
LRGD RL+R L + GE G +PRC+P + +KE++ YA+F+RLDYFS EC+
Sbjct: 184 FLRGDAGRLARGGGLGSRGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECV 238
>UNIPROTKB|Q83CP2 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
RefSeq:NP_820067.1 ProteinModelPortal:Q83CP2 GeneID:1208968
KEGG:cbu:CBU_1067 PATRIC:17930859 OMA:LAYCQER ProtClustDB:PRK10696
BioCyc:CBUR227377:GJ7S-1059-MONOMER Uniprot:Q83CP2
Length = 256
Score = 191 (72.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 58/229 (25%), Positives = 108/229 (47%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ G+R+ + SGGKDS L +L+ + NY D+F +D+ G+ D +L+
Sbjct: 22 RMINTGDRVMVCLSGGKDSYTLLSLLNSIRIEGNYKFDIFAFVLDQSQPGWDDSALRGWL 81
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
++ +P +I++ +D Y ++I G K C+ C RR + R A KIA
Sbjct: 82 DDK---KIPYEILT-RDTYSIVKEKIPA--G-KTYCSLCSRLRRGIIYRYAEEQGFSKIA 134
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ +T+L+++ R L++ + + R P Y E++I+ YA +
Sbjct: 135 LGHHRDDLIQTLLMSVFYNGQIRSMPPKLLSDNKRHVLIR--PLAYCQERDII-KYAMEQ 191
Query: 236 RLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
+ C N R + I DL + P+ +++++ N + S
Sbjct: 192 QFPLIPCNLCDSQKNLMRQRVKRLISDLAKENPKVPSNMLRALSNIKPS 240
>TIGR_CMR|CBU_1067 [details] [associations]
symbol:CBU_1067 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
RefSeq:NP_820067.1 ProteinModelPortal:Q83CP2 GeneID:1208968
KEGG:cbu:CBU_1067 PATRIC:17930859 OMA:LAYCQER ProtClustDB:PRK10696
BioCyc:CBUR227377:GJ7S-1059-MONOMER Uniprot:Q83CP2
Length = 256
Score = 191 (72.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 58/229 (25%), Positives = 108/229 (47%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ G+R+ + SGGKDS L +L+ + NY D+F +D+ G+ D +L+
Sbjct: 22 RMINTGDRVMVCLSGGKDSYTLLSLLNSIRIEGNYKFDIFAFVLDQSQPGWDDSALRGWL 81
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
++ +P +I++ +D Y ++I G K C+ C RR + R A KIA
Sbjct: 82 DDK---KIPYEILT-RDTYSIVKEKIPA--G-KTYCSLCSRLRRGIIYRYAEEQGFSKIA 134
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ +T+L+++ R L++ + + R P Y E++I+ YA +
Sbjct: 135 LGHHRDDLIQTLLMSVFYNGQIRSMPPKLLSDNKRHVLIR--PLAYCQERDII-KYAMEQ 191
Query: 236 RLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
+ C N R + I DL + P+ +++++ N + S
Sbjct: 192 QFPLIPCNLCDSQKNLMRQRVKRLISDLAKENPKVPSNMLRALSNIKPS 240
>UNIPROTKB|Q74GW7 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 KO:K14058 ProtClustDB:PRK10696
RefSeq:NP_951189.2 ProteinModelPortal:Q74GW7 GeneID:2688089
KEGG:gsu:GSU0127 PATRIC:22023000 HOGENOM:HOG000013322 OMA:FCARMRR
BioCyc:GSUL243231:GH27-138-MONOMER Uniprot:Q74GW7
Length = 282
Score = 196 (74.1 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 67/258 (25%), Positives = 115/258 (44%)
Query: 41 YEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSID 100
Y+ + + + + L + G+RIA+ SGGKDS L +L L RR +L ++ID
Sbjct: 34 YKKIKNAVGRAVADFGLIRDGDRIAVAVSGGKDSYTLLHILEGLRRRAPVKYELVAVTID 93
Query: 101 EGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQ 160
G G+R D + + R + + L+ + D+ + E + G + C+ C +R
Sbjct: 94 SGYPGFRSDVIASYLREQ-GFAHHLETTDHYDI----IREKRRP-G-SSYCSICARLKRG 146
Query: 161 ALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +K+A GH+ DD ET+LLN G + ++ L GE I +P
Sbjct: 147 VLYTLAQKLGCNKLALGHHLDDFVETLLLNQFFVGTLKAMAPRMLADNGETTVI---RPL 203
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSPNA--YRGFAREFIKDLERLRPRAILDIIKSG 277
Y E+EI+ +A R C A R ++ + +LE+ P ++++
Sbjct: 204 VYVEEREII-PFARENRFPVVCCSCPVCGTADLQRRRMKKLLTELEKENPAVKRSLLRAL 262
Query: 278 ENFRISTSTKMPEQGTCE 295
N + + Q C+
Sbjct: 263 GNVQPRYLLDLELQRLCD 280
>TIGR_CMR|GSU_0127 [details] [associations]
symbol:GSU_0127 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 KO:K14058 ProtClustDB:PRK10696
RefSeq:NP_951189.2 ProteinModelPortal:Q74GW7 GeneID:2688089
KEGG:gsu:GSU0127 PATRIC:22023000 HOGENOM:HOG000013322 OMA:FCARMRR
BioCyc:GSUL243231:GH27-138-MONOMER Uniprot:Q74GW7
Length = 282
Score = 196 (74.1 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 67/258 (25%), Positives = 115/258 (44%)
Query: 41 YEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSID 100
Y+ + + + + L + G+RIA+ SGGKDS L +L L RR +L ++ID
Sbjct: 34 YKKIKNAVGRAVADFGLIRDGDRIAVAVSGGKDSYTLLHILEGLRRRAPVKYELVAVTID 93
Query: 101 EGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQ 160
G G+R D + + R + + L+ + D+ + E + G + C+ C +R
Sbjct: 94 SGYPGFRSDVIASYLREQ-GFAHHLETTDHYDI----IREKRRP-G-SSYCSICARLKRG 146
Query: 161 ALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +K+A GH+ DD ET+LLN G + ++ L GE I +P
Sbjct: 147 VLYTLAQKLGCNKLALGHHLDDFVETLLLNQFFVGTLKAMAPRMLADNGETTVI---RPL 203
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSPNA--YRGFAREFIKDLERLRPRAILDIIKSG 277
Y E+EI+ +A R C A R ++ + +LE+ P ++++
Sbjct: 204 VYVEEREII-PFARENRFPVVCCSCPVCGTADLQRRRMKKLLTELEKENPAVKRSLLRAL 262
Query: 278 ENFRISTSTKMPEQGTCE 295
N + + Q C+
Sbjct: 263 GNVQPRYLLDLELQRLCD 280
>UNIPROTKB|Q9KS29 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0037 InterPro:IPR011063 KO:K14058
OMA:EHILPEY ProtClustDB:PRK10696 PIR:D82199 RefSeq:NP_231075.1
ProteinModelPortal:Q9KS29 DNASU:2614064 GeneID:2614064
KEGG:vch:VC1432 PATRIC:20081926 Uniprot:Q9KS29
Length = 310
Score = 199 (75.1 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 63/231 (27%), Positives = 105/231 (45%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D++ + G K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYAIVQDKVPE--G-KTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>TIGR_CMR|VC_1432 [details] [associations]
symbol:VC_1432 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01850
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 KO:K14058 OMA:EHILPEY ProtClustDB:PRK10696
PIR:D82199 RefSeq:NP_231075.1 ProteinModelPortal:Q9KS29
DNASU:2614064 GeneID:2614064 KEGG:vch:VC1432 PATRIC:20081926
Uniprot:Q9KS29
Length = 310
Score = 199 (75.1 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 63/231 (27%), Positives = 105/231 (45%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D++ + G K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYAIVQDKVPE--G-KTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>UNIPROTKB|P76055 [details] [associations]
symbol:ttcA "predicted C32 tRNA thiolase" species:83333
"Escherichia coli K-12" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IMP] HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY
ProtClustDB:PRK10696 EMBL:D21139 PIR:C64884 RefSeq:NP_415860.1
RefSeq:YP_489614.1 ProteinModelPortal:P76055 IntAct:P76055
PRIDE:P76055 EnsemblBacteria:EBESCT00000002834
EnsemblBacteria:EBESCT00000016307 GeneID:12932955 GeneID:948967
KEGG:ecj:Y75_p1321 KEGG:eco:b1344 PATRIC:32117968 EchoBASE:EB3140
EcoGene:EG13357 BioCyc:EcoCyc:G6675-MONOMER
BioCyc:ECOL316407:JW1338-MONOMER Genevestigator:P76055
Uniprot:P76055
Length = 311
Score = 192 (72.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 63/233 (27%), Positives = 106/233 (45%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ KIV ++ YG ++I + G K C+ C RR L R A+
Sbjct: 86 EHVLPEYLE---KLGVEYKIVE-ENTYGIVKEKIPE--G-KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A K C PN R + ++D ++ P I + + +N
Sbjct: 197 Q-RFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>UNIPROTKB|Q8EEM4 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY
ProtClustDB:PRK10696 RefSeq:NP_717944.1 ProteinModelPortal:Q8EEM4
GeneID:1170075 KEGG:son:SO_2354 PATRIC:23524329 Uniprot:Q8EEM4
Length = 310
Score = 188 (71.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 62/234 (26%), Positives = 102/234 (43%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ I + + G+R+ SGGKDS + +L L +R ++ +++D+ G+
Sbjct: 23 EVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILLNLQQRAPVQFEIIAVNLDQKQPGF 82
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+D L + +P I+ KD Y ++I + G K C+ C RR L A
Sbjct: 83 PEDVLPAYLDS---LNVPYHILE-KDTYSIVKEKIPE--G-KTTCSLCSRLRRGTLYGFA 135
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ KIA GH+ DDI ET+ LN+ G + L++ +DG +P Y EK+
Sbjct: 136 QRIGATKIALGHHRDDIIETLFLNMFFGGKMKAMPPKLLS--DDGANVVIRPLAYCREKD 193
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ YA K+ C N R ++ + R P I I + +N
Sbjct: 194 LE-EYAELKKFPIIPCNLCGSQENLKRQAVKDMLNQWNRQFPGRIETIFTAMQN 246
>TIGR_CMR|SO_2354 [details] [associations]
symbol:SO_2354 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY
ProtClustDB:PRK10696 RefSeq:NP_717944.1 ProteinModelPortal:Q8EEM4
GeneID:1170075 KEGG:son:SO_2354 PATRIC:23524329 Uniprot:Q8EEM4
Length = 310
Score = 188 (71.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 62/234 (26%), Positives = 102/234 (43%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ I + + G+R+ SGGKDS + +L L +R ++ +++D+ G+
Sbjct: 23 EVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILLNLQQRAPVQFEIIAVNLDQKQPGF 82
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+D L + +P I+ KD Y ++I + G K C+ C RR L A
Sbjct: 83 PEDVLPAYLDS---LNVPYHILE-KDTYSIVKEKIPE--G-KTTCSLCSRLRRGTLYGFA 135
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ KIA GH+ DDI ET+ LN+ G + L++ +DG +P Y EK+
Sbjct: 136 QRIGATKIALGHHRDDIIETLFLNMFFGGKMKAMPPKLLS--DDGANVVIRPLAYCREKD 193
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ YA K+ C N R ++ + R P I I + +N
Sbjct: 194 LE-EYAELKKFPIIPCNLCGSQENLKRQAVKDMLNQWNRQFPGRIETIFTAMQN 246
>UNIPROTKB|Q603C7 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 GO:GO:0008033 EMBL:AE017282
GenomeReviews:AE017282_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0037 InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
RefSeq:YP_115273.1 ProteinModelPortal:Q603C7 GeneID:3104039
KEGG:mca:MCA2880 PATRIC:22609640 OMA:KMRRGIL Uniprot:Q603C7
Length = 289
Score = 186 (70.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 63/231 (27%), Positives = 99/231 (42%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+R+ + SGGKDS L +L +L DL +++D+ G+ D
Sbjct: 30 QAIADYGMIQEGDRVMVCLSGGKDSFTLLDILLKLRINAPVNFDLVAVNLDQKQPGFPAD 89
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+P I+ +D Y + I+ G K C C RR L R A+
Sbjct: 90 VLPNYLSEQ---GIPFHIIE-QDTYS-VVKSIIPE-G-KTTCGLCSRLRRGLLYRYAADH 142
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+ KIA GH+ DDI ET LN+ G + L++ + R P Y E++I
Sbjct: 143 GITKIALGHHRDDILETFFLNLFYGGTLKAMPPKLLSDDRRHIVIR--PLAYCKEEDIA- 199
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA + C N R + +KD E+ P + + + +N
Sbjct: 200 RYARIRAFPIIPCNLCGSQENLQRQAMKAMLKDWEKRHPGRVETVFTALQN 250
>UNIPROTKB|Q48FG8 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 GO:GO:0008033
EMBL:CP000058 GenomeReviews:CP000058_GR Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0037 InterPro:IPR011063
HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY ProtClustDB:PRK10696
RefSeq:YP_275868.1 ProteinModelPortal:Q48FG8 STRING:Q48FG8
GeneID:3559643 KEGG:psp:PSPPH_3726 PATRIC:19976889 Uniprot:Q48FG8
Length = 274
Score = 180 (68.4 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 60/235 (25%), Positives = 102/235 (43%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ + + + G+++ + SGGKDS + VL L + D+ +++D+ G+ +
Sbjct: 21 EAVADFNMIEEGDKVMVCLSGGKDSYTMLDVLMHLQKVAPIKFDIVAVNMDQKQPGFPEH 80
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + + G+ IV KD Y + E++ G K C+ C RR L A +
Sbjct: 81 VLPAYLK---ELGIEYHIVE-KDTYS-VVKELIPE-G-KTTCSLCSRLRRGTLYTFADEI 133
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
K+A GH+ DDI ET LN+ + L +DG +P Y +EK+I
Sbjct: 134 GATKMALGHHRDDIVETFFLNMFFNGSLKAMPPKL--RADDGRNVVIRPLAYCHEKDIQ- 190
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
Y+ K+ C N R ++ + D ER P I ++ +N + S
Sbjct: 191 AYSDLKQFPIIPCNLCGSQENLQRQVVKDMLIDWERKTPGRTESIFRALQNVQPS 245
>UNIPROTKB|Q47ZU5 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0037 InterPro:IPR011063
RefSeq:YP_269674.1 ProteinModelPortal:Q47ZU5 STRING:Q47ZU5
GeneID:3519370 KEGG:cps:CPS_2974 PATRIC:21468967
HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY
BioCyc:CPSY167879:GI48-3023-MONOMER Uniprot:Q47ZU5
Length = 314
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/233 (24%), Positives = 102/233 (43%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+++ + SGGKDS + +L L D+ +++D+ G+
Sbjct: 32 VGQAIAQYNMIEDGDKVMVCLSGGKDSYAMLSILMLLKESAPIHFDIIAVNLDQKQPGFP 91
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ IV +D YG +++ + G K C+ C RR L + A
Sbjct: 92 EHILPEYLD---KLGIEYHIVE-EDTYGIVKEKVPE--G-KTTCSLCSRLRRAVLYKAAK 144
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
+ KIA GH+ DD+ ET++LN+ G + L++ ++G +P + E E+
Sbjct: 145 KIGATKIALGHHRDDMIETLMLNMFYGGKMKAMPAKLVS--DNGEHVVIRPLAFCKESEL 202
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ Y+ K C PN R + + D P I + + +N
Sbjct: 203 I-QYSELKHFPIIPCNLCGSQPNMQRQNIKRMLNDWHDQFPGRIESMFTAMQN 254
>TIGR_CMR|CPS_2974 [details] [associations]
symbol:CPS_2974 "PP-loop family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 RefSeq:YP_269674.1 ProteinModelPortal:Q47ZU5
STRING:Q47ZU5 GeneID:3519370 KEGG:cps:CPS_2974 PATRIC:21468967
HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY
BioCyc:CPSY167879:GI48-3023-MONOMER Uniprot:Q47ZU5
Length = 314
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/233 (24%), Positives = 102/233 (43%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+++ + SGGKDS + +L L D+ +++D+ G+
Sbjct: 32 VGQAIAQYNMIEDGDKVMVCLSGGKDSYAMLSILMLLKESAPIHFDIIAVNLDQKQPGFP 91
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ IV +D YG +++ + G K C+ C RR L + A
Sbjct: 92 EHILPEYLD---KLGIEYHIVE-EDTYGIVKEKVPE--G-KTTCSLCSRLRRAVLYKAAK 144
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
+ KIA GH+ DD+ ET++LN+ G + L++ ++G +P + E E+
Sbjct: 145 KIGATKIALGHHRDDMIETLMLNMFYGGKMKAMPAKLVS--DNGEHVVIRPLAFCKESEL 202
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ Y+ K C PN R + + D P I + + +N
Sbjct: 203 I-QYSELKHFPIIPCNLCGSQPNMQRQNIKRMLNDWHDQFPGRIESMFTAMQN 254
>UNIPROTKB|Q4K882 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
ProtClustDB:PRK10696 RefSeq:YP_261551.2 ProteinModelPortal:Q4K882
STRING:Q4K882 GeneID:3478582 KEGG:pfl:PFL_4463 PATRIC:19878358
BioCyc:PFLU220664:GIX8-4498-MONOMER Uniprot:Q4K882
Length = 274
Score = 176 (67.0 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/231 (25%), Positives = 100/231 (43%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ + + + G+++ + SGGKDS + VL L + ++ +++D+ G+ +
Sbjct: 21 EAVADFNMIEEGDKVMVCLSGGKDSYTMLDVLLHLQKVAPIKFEIVAVNMDQKQPGFPEH 80
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + + G+ IV KD Y + E++ G K C+ C RR L A +
Sbjct: 81 VLPAYLK---ELGIEYHIVE-KDTYS-VVKELIPE-G-KTTCSLCSRLRRGTLYTFADEI 133
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
K+A GH+ DDI ET LN+ + L+ +DG +P Y EK+I
Sbjct: 134 GATKMALGHHRDDIVETFFLNMFYNGSLKAMPPKLLA--DDGRNVVIRPLAYCSEKDIQ- 190
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ K+ C N R +E +++ ER P I + +N
Sbjct: 191 AYSDLKQFPIIPCNLCGSQENLQRQVVKEMLQEWERKTPGRTESIFRGLQN 241
>UNIPROTKB|Q885Z7 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 GO:GO:0008033
EMBL:AE016853 GenomeReviews:AE016853_GR Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0037 InterPro:IPR011063
HOGENOM:HOG000013323 KO:K14058 OMA:EHILPEY ProtClustDB:PRK10696
RefSeq:NP_791509.1 ProteinModelPortal:Q885Z7 DNASU:1183321
GeneID:1183321 KEGG:pst:PSPTO_1684 PATRIC:19994618
BioCyc:PSYR223283:GJIX-1714-MONOMER Uniprot:Q885Z7
Length = 274
Score = 174 (66.3 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 59/235 (25%), Positives = 101/235 (42%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ + + + G+++ + SGGKDS L VL + D+ +++D+ G+ +
Sbjct: 21 EAVADFNMIEEGDKVMVCLSGGKDSYTLLDVLMHFQKVAPIRFDIVAVNMDQKQPGFPEH 80
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + + G+ IV KD + + E++ G K C+ C RR L A +
Sbjct: 81 VLPAYLK---ELGVEYHIVE-KDTHS-VVKELIPE-G-KTTCSLCSRLRRGTLYTFADQI 133
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
K+A GH+ DDI ET LN+ + L +DG +P Y +EK+I
Sbjct: 134 GATKMALGHHRDDIIETFFLNMFFNGALKAMPPKL--RADDGRNVVIRPLAYCHEKDIQ- 190
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
Y+ K+ C N R ++ + D ER P I ++ +N + S
Sbjct: 191 AYSDLKQFPIIPCNLCGSQENLQRQVVKDMLLDWERKTPGRTESIFRALQNVQPS 245
>UNIPROTKB|Q5LW09 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
ProtClustDB:PRK10696 RefSeq:YP_165796.1 ProteinModelPortal:Q5LW09
DNASU:3195432 GeneID:3195432 KEGG:sil:SPO0534 PATRIC:23374331
OMA:LELVAIT Uniprot:Q5LW09
Length = 294
Score = 150 (57.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDS L VL EL R +DL ++D+G G+ L + G+P +I
Sbjct: 58 SGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPSTVLPEFLD---RMGVPNRI- 113
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D Y +D++ + G + C C RR L R A + GH+ DDI ET
Sbjct: 114 EYQDTYSVVVDKVPQ--G-RTYCALCSRLRRGNLYRIAREEGCSAVVLGHHRDDILETFF 170
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+N+ G RL+ E+G + +P + E +
Sbjct: 171 MNLFHG--GRLATMPPKLVNEEGDLFVFRPLAHVAEAD 206
>TIGR_CMR|SPO_0534 [details] [associations]
symbol:SPO_0534 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
ProtClustDB:PRK10696 RefSeq:YP_165796.1 ProteinModelPortal:Q5LW09
DNASU:3195432 GeneID:3195432 KEGG:sil:SPO0534 PATRIC:23374331
OMA:LELVAIT Uniprot:Q5LW09
Length = 294
Score = 150 (57.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDS L VL EL R +DL ++D+G G+ L + G+P +I
Sbjct: 58 SGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPSTVLPEFLD---RMGVPNRI- 113
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D Y +D++ + G + C C RR L R A + GH+ DDI ET
Sbjct: 114 EYQDTYSVVVDKVPQ--G-RTYCALCSRLRRGNLYRIAREEGCSAVVLGHHRDDILETFF 170
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+N+ G RL+ E+G + +P + E +
Sbjct: 171 MNLFHG--GRLATMPPKLVNEEGDLFVFRPLAHVAEAD 206
>UNIPROTKB|Q32NV1 [details] [associations]
symbol:ctu2-b "Cytoplasmic tRNA 2-thiolation protein 2 B"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 HOVERGEN:HBG107783 InterPro:IPR019407 Pfam:PF10288
EMBL:BC070752 EMBL:BC108465 UniGene:Xl.85791
ProteinModelPortal:Q32NV1 Xenbase:XB-GENE-5732109 Uniprot:Q32NV1
Length = 512
Score = 124 (48.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
EV ++K K+ G++C C + AAL + + C+ CF E F + + N++ G
Sbjct: 11 EVKDAKQAKSLGKICMKCKESSAALLI-RAGDAFCKSCFKEYFVHKFRATLGKNRVIYPG 69
Query: 62 ERIAIGASGGKDSTVLAFVLSE-LNRRHNYGLDLF--LLSIDEGIS-GYRDDSLQTVKRN 117
E++ + SGG S+ + + E L+R L +L IDEG + G + Q + +
Sbjct: 70 EKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL-S 128
Query: 118 EI-----QYGLPLKIVSYKDLY 134
EI Q +P IVS + ++
Sbjct: 129 EICSVLQQTKIPFHIVSLEQVF 150
Score = 68 (29.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 173 KIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYA 232
K+ TG + ++ +L N+ G A L T G + +P + KEI +
Sbjct: 260 KVMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNR 319
Query: 233 YFKRLDYF--STECIYSPNA-YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP 289
+F L F + + S N+ + F+ L+ P + + ++ E +S
Sbjct: 320 FFNVLPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSIIDA-- 377
Query: 290 EQGTC--ERC 297
+Q TC +RC
Sbjct: 378 DQETCAKDRC 387
>TIGR_CMR|CHY_0213 [details] [associations]
symbol:CHY_0213 "tRNA(Ile)-lysidine synthetase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0016879 "ligase
activity, forming carbon-nitrogen bonds" evidence=ISS]
HAMAP:MF_01161 InterPro:IPR012094 InterPro:IPR012795
InterPro:IPR012796 InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734
SMART:SM00977 Pfam:PF01171 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037
HOGENOM:HOG000236506 KO:K04075 TIGRFAMs:TIGR02433
TIGRFAMs:TIGR02432 RefSeq:YP_359085.1 ProteinModelPortal:Q3AFJ9
STRING:Q3AFJ9 GeneID:3726297 KEGG:chy:CHY_0213 PATRIC:21273607
OMA:RILRYEA BioCyc:CHYD246194:GJCN-214-MONOMER Uniprot:Q3AFJ9
Length = 449
Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/140 (31%), Positives = 65/140 (46%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD-SLQTV 114
Q+ GE++ +G SGG DS L F L L R L ++ ++ G+ G D + V
Sbjct: 16 QMINPGEKVVVGVSGGPDSMALLFCL--LKYREEVDFSLEVVHVNHGLRGRESDLDEELV 73
Query: 115 KRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI 174
+YG+ + DL + E ++ + + F F GA DKI
Sbjct: 74 LDFTRKYGINFHVKKLDDLKD--LRENLQAVARQKRYEF---FYEVLEKTGA-----DKI 123
Query: 175 ATGHNADDIAETVLLNILRG 194
A H A D+AETV++NILRG
Sbjct: 124 ALAHTASDVAETVMMNILRG 143
>UNIPROTKB|Q08B12 [details] [associations]
symbol:ctu2-a "Cytoplasmic tRNA 2-thiolation protein 2 A"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 EMBL:BC097664 EMBL:BC124921 RefSeq:NP_001167511.1
UniGene:Xl.3616 ProteinModelPortal:Q08B12 GeneID:100381163
KEGG:xla:100381163 CTD:348180 Xenbase:XB-GENE-6466467
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
Uniprot:Q08B12
Length = 512
Score = 123 (48.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
EV ++K K+ G++C C + AAL + + C+ CF E F + + N++ G
Sbjct: 11 EVKDAKQGKSLGKICMKCKESSAALLI-RAGDAFCKSCFKEYFVHKFRATLGKNRVIYPG 69
Query: 62 ERIAIGASGGKDSTVLAFVLSE-LNRRHNYGLDLF--LLSIDEGIS-GYRDDSLQTVKRN 117
E++ + SGG S+ + + E L+R L +L IDEG + G + Q + +
Sbjct: 70 EKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL-S 128
Query: 118 EI-----QYGLPLKIVSYKDLY 134
EI Q +P IVS + ++
Sbjct: 129 EICSVLQQTKIPFHIVSLEQVF 150
Score = 62 (26.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/130 (21%), Positives = 52/130 (40%)
Query: 173 KIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYA 232
K+ TG + ++ +L N+ G A L T G + +P + KEI +
Sbjct: 260 KVMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNR 319
Query: 233 YFKRLDYF--STECIYSPNA-YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP 289
+F F + + S N+ + F+ L+ P + + ++ E +S
Sbjct: 320 FFNVSPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSKIDA-- 377
Query: 290 EQGTC--ERC 297
+Q TC +RC
Sbjct: 378 DQETCAKDRC 387
>WB|WBGene00022195 [details] [associations]
symbol:Y71H2B.5 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 Pfam:PF01171 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0003824
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:FO081557 OMA:HEARDII RefSeq:NP_497589.3
ProteinModelPortal:Q9N4F1 SMR:Q9N4F1 PaxDb:Q9N4F1
EnsemblMetazoa:Y71H2B.5 GeneID:175380 KEGG:cel:CELE_Y71H2B.5
UCSC:Y71H2B.5 CTD:175380 WormBase:Y71H2B.5 HOGENOM:HOG000019054
InParanoid:Q9N4F1 NextBio:887910 Uniprot:Q9N4F1
Length = 957
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 41 YEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYG----LDLFL 96
Y+ + IHQ+ ++ + G+++ + SGGKDS L +L +R N +L
Sbjct: 703 YKKVTDIIHQL----KMIRDGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFELGA 758
Query: 97 LSIDEGISGYRDDSL-QTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCG 155
+++D G + Y L + +R I Y +D+ G K GL++ C FC
Sbjct: 759 ITVDPGSAEYNPRPLIEYCRRLNIDY-----FYEEQDIIGAAR----KTPGLRSICAFCS 809
Query: 156 VFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPR 215
+R L A L + +A G + DD+AE+ + + LS T +DG +
Sbjct: 810 RMKRGRLAAAAQLHGWNVLAMGQHLDDLAESFFIAAFQN--GNLSTMKAQYTTKDGALRV 867
Query: 216 CKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
+P EK + +A K+L + C
Sbjct: 868 IRPLVMVREKALR-NFAEDKKLPVVAENC 895
>UNIPROTKB|Q28ES8 [details] [associations]
symbol:ctu2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000007287 GeneTree:ENSGT00390000008797
EMBL:CR762362 EMBL:BC089700 EMBL:BC167302 EMBL:BC170700
EMBL:BC170702 RefSeq:NP_001034829.1 UniGene:Str.6323
ProteinModelPortal:Q28ES8 Ensembl:ENSXETT00000024569 GeneID:548371
KEGG:xtr:548371 Xenbase:XB-GENE-5732028 InParanoid:Q5FVY8
Bgee:Q28ES8 Uniprot:Q28ES8
Length = 516
Score = 114 (45.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 36/141 (25%), Positives = 65/141 (46%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
E+ ++ K+ G+ C C + A L + + C+ CF E F + + N++ G
Sbjct: 11 ELQDTTQGKSLGKTCMKCKESSAVLLI-RAGDAFCKSCFKEYFVHKFRATLGKNRVIYPG 69
Query: 62 ERIAIGASGGKDSTVLAFVLSE-LNRRHNYGLDLF--LLSIDEGIS-GY----RDDSLQT 113
E++ + SGG S+ + + E ++R L +L IDEG + G R ++
Sbjct: 70 EKVLLAFSGGPSSSAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSE 129
Query: 114 VKRNEIQYGLPLKIVSYKDLY 134
V+ Q G P IVS + ++
Sbjct: 130 VQNVLQQTGFPFYIVSLEQVF 150
Score = 69 (29.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 31/131 (23%), Positives = 55/131 (41%)
Query: 173 KIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYA 232
K+ +G + ++ ++L NI G A L T G + +P + KEI F
Sbjct: 263 KVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSLKEIAFYNR 322
Query: 233 YFKRLDYF----STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM 288
F F +T+ + + ++ + + FI L+ P + + ++ E +S
Sbjct: 323 LFHVSSVFIPALNTKVLEN-SSIQQLSEVFINRLQADFPSTVSTVYRTSEKLNVSKIDA- 380
Query: 289 PEQGTC--ERC 297
QGTC ERC
Sbjct: 381 -NQGTCAKERC 390
>UNIPROTKB|Q0BYJ5 [details] [associations]
symbol:ttcA "tRNA 2-thiocytidine biosynthesis protein TtcA"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01850 InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0037 InterPro:IPR011063 HOGENOM:HOG000013323 KO:K14058
OMA:EHILPEY ProtClustDB:PRK10696 RefSeq:YP_761448.1
ProteinModelPortal:Q0BYJ5 STRING:Q0BYJ5 GeneID:4287177
KEGG:hne:HNE_2769 PATRIC:32218411
BioCyc:HNEP228405:GI69-2776-MONOMER Uniprot:Q0BYJ5
Length = 295
Score = 132 (51.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSL-QTVKRNEIQYGLPLKI 127
SGGKDS L VL +L + +DL ++D+G G+ L + + +N G+ KI
Sbjct: 63 SGGKDSYGLLAVLLDLQWQGALPVDLIACNLDQGQPGFPKHILPEWLTQN----GVTHKI 118
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
++ +D Y D++ + G + C+ C RR L R A + I GH+ DD T
Sbjct: 119 IT-EDTYSIVTDKVPE--G-RTYCSMCSRLRRGILYRVAREEGCEAIVLGHHRDDALATF 174
Query: 188 LLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
++N++ G RL+ +DG + +P E ++
Sbjct: 175 MMNLIHG--GRLAAMPPKLLNDDGDVQVFRPLITAAEDDL 212
>UNIPROTKB|Q5HX48 [details] [associations]
symbol:CJE0113 "PP-loop family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013322 RefSeq:YP_178137.1
ProteinModelPortal:Q5HX48 STRING:Q5HX48 GeneID:3230876
KEGG:cjr:CJE0113 PATRIC:20041933 OMA:DHIVIRP ProtClustDB:CLSK872520
BioCyc:CJEJ195099:GJC0-117-MONOMER Uniprot:Q5HX48
Length = 251
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 48 IHQVIVGNQLF---KAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGIS 104
I QV N F K G+R+ +G SGGKDS LA +L+ + + +L +++ G+
Sbjct: 9 IRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHLLNRMQAHAPFKFELEAVTLSYGMG 68
Query: 105 GYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDR 164
+D E ++G+ ++ ++Y + D I + N +FC F R + R
Sbjct: 69 ---EDYSHLHAHCE-EHGIKHSVLD-SNIYEVSGDTI------RENSSFCSYFSR--MRR 115
Query: 165 GA----SLLK-VDKIATGHNADDIAETVLLNILRGDIAR 198
GA +L K +K+A H+ DD AE+ +N + R
Sbjct: 116 GALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALR 154
>TIGR_CMR|CJE_0113 [details] [associations]
symbol:CJE_0113 "PP-loop family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005524
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000013322 RefSeq:YP_178137.1
ProteinModelPortal:Q5HX48 STRING:Q5HX48 GeneID:3230876
KEGG:cjr:CJE0113 PATRIC:20041933 OMA:DHIVIRP ProtClustDB:CLSK872520
BioCyc:CJEJ195099:GJC0-117-MONOMER Uniprot:Q5HX48
Length = 251
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 48 IHQVIVGNQLF---KAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGIS 104
I QV N F K G+R+ +G SGGKDS LA +L+ + + +L +++ G+
Sbjct: 9 IRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHLLNRMQAHAPFKFELEAVTLSYGMG 68
Query: 105 GYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDR 164
+D E ++G+ ++ ++Y + D I + N +FC F R + R
Sbjct: 69 ---EDYSHLHAHCE-EHGIKHSVLD-SNIYEVSGDTI------RENSSFCSYFSR--MRR 115
Query: 165 GA----SLLK-VDKIATGHNADDIAETVLLNILRGDIAR 198
GA +L K +K+A H+ DD AE+ +N + R
Sbjct: 116 GALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALR 154
>TIGR_CMR|SO_1645 [details] [associations]
symbol:SO_1645 "tRNA(Ile)-lysidine synthetase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 HOGENOM:HOG000236507
RefSeq:NP_717256.1 ProteinModelPortal:Q8EGF9 GeneID:1169439
KEGG:son:SO_1645 PATRIC:23522924 OMA:KSAVGFF ProtClustDB:CLSK906358
Uniprot:Q8EGF9
Length = 464
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 54/214 (25%), Positives = 97/214 (45%)
Query: 59 KAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNE 118
+AG ++ + SGG DS VLA+ LSE ++ L L+ + G+S D+ + +
Sbjct: 20 QAGSKLVLAYSGGVDSEVLAYGLSEYAKQRP-DLRYQLIYVHHGLSPNADNWAKHCQARA 78
Query: 119 IQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGH 178
YGLP+ + + + G + V+ K R QA+ L D + T H
Sbjct: 79 AIYGLPVTVERVQLILGPRVS--VEAEARKA--------RYQAIL--PHLNPQDILLTAH 126
Query: 179 NADDIAETVLLNILRGD----IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
+ DD ET+LL + RG +A + + ++ + G + +P +E++ T+A
Sbjct: 127 HEDDQLETILLALKRGQGPKGLAAMGQIQPLSLADKGSCLQVRPL-LDISREMIETFAQT 185
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
++L + E R F R ++ + RL+ R
Sbjct: 186 RQLVHIEDESNQDDKYDRNFLR--LEIIPRLKAR 217
>DICTYBASE|DDB_G0290035 [details] [associations]
symbol:DDB_G0290035 species:44689 "Dictyostelium
discoideum" [GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 dictyBase:DDB_G0290035 Pfam:PF01171
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0003824 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:AAFI02000151 RefSeq:XP_635931.1
ProteinModelPortal:Q54GN1 EnsemblProtists:DDB0188699 GeneID:8627452
KEGG:ddi:DDB_G0290035 InParanoid:Q54GN1 OMA:HEARDII Uniprot:Q54GN1
Length = 1165
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 50/211 (23%), Positives = 85/211 (40%)
Query: 37 RECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFL 96
RE + I Q I+ ++ K G+++ +G SGGKDS L L +L RR +
Sbjct: 898 RENLQKKINSNIVQTILNYEMIKDGDKVLVGVSGGKDSLTLIHTLLDLRRRSKAKYTVAA 957
Query: 97 LSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN---CTF 153
++D Y D S +K G+P VS + + + G++N C +
Sbjct: 958 CTVDPQSPDY-DPS--QLKNYFASLGVPYFYVSQAIME--SAKSCMLREGIENKASICAY 1012
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPI 213
C RR + + +A G + DD++E+ L++ + LS + E G +
Sbjct: 1013 CSRMRRGIMYDICRREGYNVLALGQHLDDLSESFLMSAFYNGM--LSTMKVNYLNEQGDV 1070
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
+P E + +A L S C
Sbjct: 1071 RIIRPLANLRESQTRL-FAKVMGLPVISENC 1100
>TIGR_CMR|GSU_1810 [details] [associations]
symbol:GSU_1810 "tRNA(Ile)-lysidine synthetase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
Pfam:PF11734 SMART:SM00977 Pfam:PF01171 GO:GO:0005524 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037
HOGENOM:HOG000236506 KO:K04075 OMA:NDISYPL PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 RefSeq:NP_952860.1
ProteinModelPortal:Q74C65 GeneID:2686327 KEGG:gsu:GSU1810
PATRIC:22026475 ProtClustDB:CLSK828574
BioCyc:GSUL243231:GH27-1861-MONOMER Uniprot:Q74C65
Length = 471
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 60/229 (26%), Positives = 95/229 (41%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR-DDSLQTVK 115
+F+ G+R+ + SGG DS L +L LN LDL + ++ + G D+ + V+
Sbjct: 23 MFRPGDRVVVAVSGGADSVALVDILVSLNELR---LDLVVAHLNHKLRGAASDEDERFVE 79
Query: 116 RNEIQYGLPL--KIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL-DRGASLLKVD 172
+ Y LP + K L W + L++ G R A D A+
Sbjct: 80 QCAQTYALPFVSRGEQVKALAEWER------LSLED----AGRRARYAFFDDVAAACGAR 129
Query: 173 KIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI---MF 229
+A H+ADD AET+L+ ++RG L + G G R P +EI +
Sbjct: 130 TVALAHHADDQAETLLMRLVRG-AGGLGLSAMQPVGAGGKYVR--PLLALGRQEIEAYLD 186
Query: 230 TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGE 278
R D +T+ + N R E + L RL P A + ++ E
Sbjct: 187 ARGLAFRQDQSNTDVAFLRNRIR---HELVPYLGRLNPGAASRLARTAE 232
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 357 0.00080 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 602 (64 KB)
Total size of DFA: 232 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.27u 0.09s 27.36t Elapsed: 00:00:02
Total cpu time: 27.28u 0.09s 27.37t Elapsed: 00:00:02
Start: Tue May 21 04:08:17 2013 End: Tue May 21 04:08:19 2013