BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041164
(357 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224083793|ref|XP_002307125.1| predicted protein [Populus trichocarpa]
gi|222856574|gb|EEE94121.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/349 (91%), Positives = 334/349 (95%)
Query: 9 KKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGA 68
KKA GRLC CNQR+AALKRPKTLEQICRECFYEVFEEEIHQVIV NQLFK GERIAIGA
Sbjct: 6 KKAAGRLCYLCNQRRAALKRPKTLEQICRECFYEVFEEEIHQVIVKNQLFKPGERIAIGA 65
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIV
Sbjct: 66 SGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIV 125
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
SYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ TGHNADDIAETVL
Sbjct: 126 SYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVL 185
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
LNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEIM TYAYFKRLDYFSTECIYSP
Sbjct: 186 LNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIMLTYAYFKRLDYFSTECIYSP 245
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
NAYRGFAREFIKDLER+RPRAILDIIKSGE+FRISTSTKMPEQGTCERCGYISSQKWCKA
Sbjct: 246 NAYRGFAREFIKDLERMRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKA 305
Query: 309 CVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
CVLLEGLN+GLPK+GI RSRG +N KD+KQ+ GTKNIE KQCG+LDF
Sbjct: 306 CVLLEGLNKGLPKLGIGRSRGLDNNHRKDVKQSNGTKNIEGKQCGSLDF 354
>gi|255539134|ref|XP_002510632.1| cancer-associatedprotein protein, putative [Ricinus communis]
gi|223551333|gb|EEF52819.1| cancer-associatedprotein protein, putative [Ricinus communis]
Length = 361
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/361 (86%), Positives = 341/361 (94%), Gaps = 4/361 (1%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
ME A++K+K+ RLC CNQR+AAL+RPKTLEQICRECFY+VFEEEIHQVIV N LFK
Sbjct: 1 MEEADTKAKRTLARLCGFCNQRRAALRRPKTLEQICRECFYKVFEEEIHQVIVDNHLFKP 60
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GER+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQ
Sbjct: 61 GERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPLKIVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ATGHNA
Sbjct: 121 YGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVATGHNA 180
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI----MFTYAYFKR 236
DDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI +FTYAYFKR
Sbjct: 181 DDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEINLNQIFTYAYFKR 240
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCER 296
LDYFSTECIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+TKMPEQGTCER
Sbjct: 241 LDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTNTKMPEQGTCER 300
Query: 297 CGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLD 356
CGYISSQKWCKACVLLEGLN+GLPK+GI RSRG +N+ KD+ Q+ GT+NI+SK+CGTLD
Sbjct: 301 CGYISSQKWCKACVLLEGLNQGLPKLGIGRSRGLDNDGRKDVNQSHGTRNIDSKRCGTLD 360
Query: 357 F 357
F
Sbjct: 361 F 361
>gi|359492862|ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
[Vitis vinifera]
Length = 363
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/363 (85%), Positives = 333/363 (91%), Gaps = 6/363 (1%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
M AE K KKAG CS C+QR+AALKRPKTLEQICRECFY VFEEEIH+V+V NQLFK
Sbjct: 1 MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GERIAIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQ
Sbjct: 61 GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPLK+VSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA++LKVDK+ATGHNA
Sbjct: 121 YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM------FTYAYF 234
DDIAETVLLNILRGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEI+ +TYAYF
Sbjct: 181 DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEILQNLNRIYTYAYF 240
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
KRLDYFSTECIYSPNAYRGFAREFIKDLER+RPRAILDII+SGE FRISTS KMPEQGTC
Sbjct: 241 KRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTC 300
Query: 295 ERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGT 354
ERCGYISSQKWCKACVLLEGLNRGLPK+GI R+RG NN D KQ+ G KNI+SKQCGT
Sbjct: 301 ERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGT 360
Query: 355 LDF 357
LDF
Sbjct: 361 LDF 363
>gi|449450470|ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus]
gi|449529421|ref|XP_004171698.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus]
Length = 359
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/359 (86%), Positives = 334/359 (93%), Gaps = 2/359 (0%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
ME A K K+A LC CN RKAALKRPKTL+QICRECFYEVFEEEIHQVIV NQLF+
Sbjct: 1 MEEAAPKPKRAVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GERIA+GASGGKDSTVLA+VLSELN+RHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQ
Sbjct: 61 GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
DD+AETVLLNILRGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEIMFTYAYFK+LDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIMFTYAYFKKLDYF 240
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
STECIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGE+FRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDM--KQNKGTKNIESKQCGTLDF 357
SSQKWCKACVLLEGLNRGLPK+GI RSRG ++E ++ N T++IESKQCG+LDF
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDSEGKRETIGSNNVHTRSIESKQCGSLDF 359
>gi|225459814|ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
[Vitis vinifera]
Length = 356
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/357 (87%), Positives = 331/357 (92%), Gaps = 1/357 (0%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
M AE K KKAG CS C+QR+AALKRPKTLEQICRECFY VFEEEIH+V+V NQLFK
Sbjct: 1 MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GERIAIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQ
Sbjct: 61 GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPLK+VSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA++LKVDK+ATGHNA
Sbjct: 121 YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
DDIAETVLLNILRGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEI+ YAYFKRLDYF
Sbjct: 181 DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKRLDYF 239
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
STECIYSPNAYRGFAREFIKDLER+RPRAILDII+SGE FRISTS KMPEQGTCERCGYI
Sbjct: 240 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYI 299
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
SSQKWCKACVLLEGLNRGLPK+GI R+RG NN D KQ+ G KNI+SKQCGTLDF
Sbjct: 300 SSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTLDF 356
>gi|302141685|emb|CBI18888.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/370 (84%), Positives = 333/370 (90%), Gaps = 13/370 (3%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
M AE K KKAG CS C+QR+AALKRPKTLEQICRECFY VFEEEIH+V+V NQLFK
Sbjct: 1 MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKP 60
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GERIAIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQ
Sbjct: 61 GERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPLK+VSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA++LKVDK+ATGHNA
Sbjct: 121 YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNA 180
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI------------- 227
DDIAETVLLNILRGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEI
Sbjct: 181 DDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVIYPYSFLQNLNR 240
Query: 228 MFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK 287
++TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER+RPRAILDII+SGE FRISTS K
Sbjct: 241 IYTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAK 300
Query: 288 MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNI 347
MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPK+GI R+RG NN D KQ+ G KNI
Sbjct: 301 MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNI 360
Query: 348 ESKQCGTLDF 357
+SKQCGTLDF
Sbjct: 361 QSKQCGTLDF 370
>gi|297828145|ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
lyrata]
gi|297327794|gb|EFH58214.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
lyrata]
Length = 355
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/355 (85%), Positives = 329/355 (92%), Gaps = 3/355 (0%)
Query: 5 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
E+KSKKA RLC CN R+ LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK+GER
Sbjct: 2 EAKSKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+TVKRNE+QYGL
Sbjct: 62 VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ TGHNADDI
Sbjct: 122 PLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDI 181
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTE
Sbjct: 182 AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTE 240
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 303
CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYISSQ
Sbjct: 241 CIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQ 300
Query: 304 KWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGT-KNIESKQCGTLDF 357
KWCKACVLLEGLNRGLPKMGI R RG N + + K+ K+IESKQCG+LDF
Sbjct: 301 KWCKACVLLEGLNRGLPKMGIGRPRGVNGDHKMETKKPGSVAKSIESKQCGSLDF 355
>gi|145360979|ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
gi|226711456|sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis thaliana]
gi|30725380|gb|AAP37712.1| At2g44270 [Arabidopsis thaliana]
gi|330255305|gb|AEC10399.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
Length = 355
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/355 (85%), Positives = 330/355 (92%), Gaps = 3/355 (0%)
Query: 5 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
E+K+KKA RLC CN R+ LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK+GER
Sbjct: 2 EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+TVKRNE+QYGL
Sbjct: 62 VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLKIVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKV+K+ TGHNADDI
Sbjct: 122 PLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDI 181
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTE
Sbjct: 182 AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTE 240
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 303
CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYISSQ
Sbjct: 241 CIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQ 300
Query: 304 KWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGT-KNIESKQCGTLDF 357
KWCKACVLLEGLNRGLPKMGI R RG N + K+ K+ K+IESKQCG+LDF
Sbjct: 301 KWCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355
>gi|3128173|gb|AAC16077.1| hypothetical protein [Arabidopsis thaliana]
Length = 358
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 299/357 (83%), Positives = 326/357 (91%), Gaps = 4/357 (1%)
Query: 5 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
E+K+KKA RLC CN R+ LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK+GER
Sbjct: 2 EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGER 61
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+TVKRNE+QYGL
Sbjct: 62 VAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGL 121
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLKIVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKV+K+ TGHNADDI
Sbjct: 122 PLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDI 181
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK--RLDYFS 241
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ + +LDYFS
Sbjct: 182 AETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVIYPSLHNAFKLDYFS 241
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYIS 301
TECIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYIS
Sbjct: 242 TECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYIS 301
Query: 302 SQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGT-KNIESKQCGTLDF 357
SQKWCKACVLLEGLNRGLPKMGI R RG N + K+ K+ K+IESKQCG+LDF
Sbjct: 302 SQKWCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 358
>gi|363814272|ref|NP_001242776.1| uncharacterized protein LOC100816096 [Glycine max]
gi|255635229|gb|ACU17969.1| unknown [Glycine max]
Length = 353
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/354 (81%), Positives = 319/354 (90%), Gaps = 3/354 (0%)
Query: 4 AESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
E +K G RLC C + +A++KRPKTLEQICRECFY+ FE EIHQVI+ NQLF GER
Sbjct: 3 GEGGERKRGARLCCVCKKSRASVKRPKTLEQICRECFYDAFESEIHQVILENQLFSPGER 62
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLS+LNR HNYGL LFLLS+DEGI+GYRDDSL+TV RN+IQYGL
Sbjct: 63 VAIGASGGKDSTVLAYVLSKLNRLHNYGLHLFLLSVDEGITGYRDDSLETVHRNQIQYGL 122
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLK+VSYKDLYGWTMDEIV+VIGLKNNCTFCGVFRRQALDRGASLLKVDK+ TGHNADDI
Sbjct: 123 PLKVVSYKDLYGWTMDEIVRVIGLKNNCTFCGVFRRQALDRGASLLKVDKVVTGHNADDI 182
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLN+LR D+ARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTE
Sbjct: 183 AETVLLNLLRVDVARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTE 241
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 303
CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ
Sbjct: 242 CIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 301
Query: 304 KWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
KWCKACVLL+GLNRGLPK+GI RSRG + + + ++K K+I+ KQC TLDF
Sbjct: 302 KWCKACVLLDGLNRGLPKLGIGRSRG--SVASDNGNESKVEKSIQGKQCTTLDF 353
>gi|334184910|ref|NP_001189746.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
gi|330255306|gb|AEC10400.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
Length = 358
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/365 (81%), Positives = 321/365 (87%), Gaps = 20/365 (5%)
Query: 5 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQ----------ICRECFYEVFEEEIHQVIV 53
E+K+KKA RLC CN R+ LKRPKTL+Q RECFYEVFEEEIHQVIV
Sbjct: 2 EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQQKLGTHFYTVSVRECFYEVFEEEIHQVIV 61
Query: 54 GNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQT 113
N+LFK+GER+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+T
Sbjct: 62 QNRLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLET 121
Query: 114 VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
VKRNE+QYGLPLKIVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKV+K
Sbjct: 122 VKRNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEK 181
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
+ TGHNADDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPF FTYAY
Sbjct: 182 LVTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFN--------FTYAY 233
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
FK+LDYFSTECIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGE+FRI+T+TKMPEQGT
Sbjct: 234 FKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGT 293
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGT-KNIESKQC 352
CERCGYISSQKWCKACVLLEGLNRGLPKMGI R RG N + K+ K+ K+IESKQC
Sbjct: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQC 353
Query: 353 GTLDF 357
G+LDF
Sbjct: 354 GSLDF 358
>gi|212724116|ref|NP_001132208.1| hypothetical protein [Zea mays]
gi|194693758|gb|ACF80963.1| unknown [Zea mays]
gi|413939020|gb|AFW73571.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 364
Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/354 (82%), Positives = 317/354 (89%), Gaps = 10/354 (2%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+AG RLC C +RKAALKRPKTLEQICRECFY +FE+EIHQ IV N LFKAGER+AIGAS
Sbjct: 15 RAGSRLCVRCGERKAALKRPKTLEQICRECFYIIFEDEIHQTIVQNSLFKAGERVAIGAS 74
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVLA+VLSELNR+HNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIVS
Sbjct: 75 GGKDSTVLAYVLSELNRQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVS 134
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLK DKI TGHNADDIAETVLL
Sbjct: 135 YKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDIAETVLL 194
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
NILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPN
Sbjct: 195 NILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPN 253
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
AYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQGTCERCGYISSQK CKAC
Sbjct: 254 AYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKAC 313
Query: 310 VLLEGLNRGLPKMGI------VRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
VLL+GLNRGLPK+GI R+ +RTK ++N T +++ K G DF
Sbjct: 314 VLLDGLNRGLPKLGIGSTKAGARADSDGKQRTKRSERN--TSSLQGKH-GNFDF 364
>gi|297842365|ref|XP_002889064.1| hypothetical protein ARALYDRAFT_476769 [Arabidopsis lyrata subsp.
lyrata]
gi|297334905|gb|EFH65323.1| hypothetical protein ARALYDRAFT_476769 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/357 (82%), Positives = 315/357 (88%), Gaps = 26/357 (7%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
ME E+KSKKAGG ECFYEVFEEEIHQVIVGN+LFK+
Sbjct: 1 MEAGEAKSKKAGG------------------------ECFYEVFEEEIHQVIVGNRLFKS 36
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GER+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLS+DEGI+GYRDDSL+TVKRNE+Q
Sbjct: 37 GERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEVQ 96
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ TGHNA
Sbjct: 97 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNA 156
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
DDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYF
Sbjct: 157 DDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 215
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
STECIYSPNAYRGFAREFIKDLER RPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYI
Sbjct: 216 STECIYSPNAYRGFAREFIKDLERPRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYI 275
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
SSQKWCKACVLLEGLNRGLPKMGI R RG N++ KD K K+IESKQCG+LDF
Sbjct: 276 SSQKWCKACVLLEGLNRGLPKMGIGRPRGSGNDQ-KDTKARSTAKSIESKQCGSLDF 331
>gi|242066610|ref|XP_002454594.1| hypothetical protein SORBIDRAFT_04g034030 [Sorghum bicolor]
gi|241934425|gb|EES07570.1| hypothetical protein SORBIDRAFT_04g034030 [Sorghum bicolor]
Length = 364
Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/357 (81%), Positives = 316/357 (88%), Gaps = 4/357 (1%)
Query: 4 AESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
A +AG RLC C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFKAGER
Sbjct: 9 ARLPPPRAGSRLCVRCGERKAALKRPKTLEQICRECFYIVFEDEIHQTIVENSLFKAGER 68
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNR HNYGLDLFLLSIDEGI+GYRDDSL+TVKRNEIQYGL
Sbjct: 69 VAIGASGGKDSTVLAYVLSELNRHHNYGLDLFLLSIDEGITGYRDDSLETVKRNEIQYGL 128
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLKIVSYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLK DKI TGHNADDI
Sbjct: 129 PLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDI 188
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTE
Sbjct: 189 AETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTE 247
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 303
CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQGTCERCGYISSQ
Sbjct: 248 CIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQ 307
Query: 304 KWCKACVLLEGLNRGLPKMGIVRSR---GQNNERTKDMKQNKGTKNIESKQCGTLDF 357
K CKACVLL+GLNRGLPK+GI R++ G +++ + K+++ + G DF
Sbjct: 308 KLCKACVLLDGLNRGLPKLGIGRTKSGAGADSDGKQRTKRSERRNTSLQGKHGNFDF 364
>gi|357467587|ref|XP_003604078.1| Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula]
gi|355493126|gb|AES74329.1| Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula]
Length = 348
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/344 (82%), Positives = 315/344 (91%), Gaps = 3/344 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R+C CN+R+A+LKRPKTL+QICRECFY FE+EIHQ+IV N+LF G+RIAIGASGGKD
Sbjct: 8 RMCCLCNERRASLKRPKTLQQICRECFYLAFEDEIHQLIVDNRLFTRGDRIAIGASGGKD 67
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+VLS+LNR H+YGL LFLLS+DEGI+GYRDDSL+TV RN+I+YGLPLKIVSYKDL
Sbjct: 68 STVLAYVLSKLNRVHDYGLHLFLLSVDEGITGYRDDSLETVHRNQIEYGLPLKIVSYKDL 127
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+ LK DK+ TGHNADDIAETVLLNILR
Sbjct: 128 YGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILR 187
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARLSRC+ I TGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 188 GDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRG 246
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
FAREFIKDLER+RPRAILDIIKSGENFRIST+TKMPEQG CERCGYISSQKWCKACVLL+
Sbjct: 247 FAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGFCERCGYISSQKWCKACVLLD 306
Query: 314 GLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
GLNRGLPK+GI RSR K+ ++ GTK+IESKQCG+LDF
Sbjct: 307 GLNRGLPKLGIGRSRVAIG--FKEENKSHGTKSIESKQCGSLDF 348
>gi|115448847|ref|NP_001048203.1| Os02g0762300 [Oryza sativa Japonica Group]
gi|75225396|sp|Q6Z6G6.1|CTU1_ORYSJ RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46805899|dbj|BAD17212.1| n-type ATP pyrophosphatase-like [Oryza sativa Japonica Group]
gi|113537734|dbj|BAF10117.1| Os02g0762300 [Oryza sativa Japonica Group]
gi|215741300|dbj|BAG97795.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 363
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/320 (88%), Positives = 303/320 (94%), Gaps = 1/320 (0%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGAS
Sbjct: 14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGAS 73
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVLA+VLSELNRRH Y LDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIVS
Sbjct: 74 GGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVS 133
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKVDKI TGHNADDIAETVLL
Sbjct: 134 YKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLL 193
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
NILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPN
Sbjct: 194 NILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPN 252
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
AYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQGTCERCGYISSQK CKAC
Sbjct: 253 AYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKAC 312
Query: 310 VLLEGLNRGLPKMGIVRSRG 329
VLL+GLNRGLPK+GI R++G
Sbjct: 313 VLLDGLNRGLPKLGIGRTKG 332
>gi|145337616|ref|NP_177744.2| 2-thiocytidine tRNA biosynthesis protein, TtcA [Arabidopsis
thaliana]
gi|332197684|gb|AEE35805.1| 2-thiocytidine tRNA biosynthesis protein, TtcA [Arabidopsis
thaliana]
Length = 332
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/357 (81%), Positives = 310/357 (86%), Gaps = 25/357 (7%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
ME E KSKKAGG ECFYEVFEEEIHQVIVGN+LFK
Sbjct: 1 MEAGEEKSKKAGG------------------------ECFYEVFEEEIHQVIVGNRLFKF 36
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GER+AIGASGGKDS+VLA+VLSELNRRH+YGLDLFLLSIDEGI+GYRDDSL+TVKRNE+Q
Sbjct: 37 GERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLLSIDEGITGYRDDSLETVKRNEVQ 96
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
YGLPL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ TGHNA
Sbjct: 97 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNA 156
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
DDIAETV+LNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYF
Sbjct: 157 DDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 215
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
STECIYSPNAYRGFA EFI DLERLRPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYI
Sbjct: 216 STECIYSPNAYRGFACEFINDLERLRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYI 275
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
SSQKWCKACVLLEGLNRGLPKMGI R RG N KD+K K IESKQCG+LDF
Sbjct: 276 SSQKWCKACVLLEGLNRGLPKMGIGRPRGNVNGDYKDIKARSTAKTIESKQCGSLDF 332
>gi|357137990|ref|XP_003570581.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Brachypodium distachyon]
Length = 358
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/359 (80%), Positives = 313/359 (87%), Gaps = 5/359 (1%)
Query: 3 VAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE 62
+ + S +AG RLC C +RKAALKRPKTLEQICRECFY VFE+EIH+ IV N LFK GE
Sbjct: 1 MQSAPSTRAGSRLCVRCGERKAALKRPKTLEQICRECFYVVFEDEIHRTIVDNCLFKPGE 60
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R+AIGASGGKDSTVLA+VLSELN RH YGLDLFLLSIDEGI+GYRDDSL+TVKRNEIQYG
Sbjct: 61 RVAIGASGGKDSTVLAYVLSELNNRHKYGLDLFLLSIDEGITGYRDDSLETVKRNEIQYG 120
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
LPLKIVSYKDLY WTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKVDKI TGHNADD
Sbjct: 121 LPLKIVSYKDLYDWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADD 180
Query: 183 IAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFST 242
IAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFST
Sbjct: 181 IAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFST 239
Query: 243 ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
ECIYSPNAYRGFAREFIKDLER+RPRAILDII SGENFRIST+TKMPEQGTCERCGYISS
Sbjct: 240 ECIYSPNAYRGFAREFIKDLERMRPRAILDIITSGENFRISTTTKMPEQGTCERCGYISS 299
Query: 303 QKWCKACVLLEGLNRGLPKMGIVRSR----GQNNERTKDMKQNKGTKNIESKQCGTLDF 357
QK CKACVLL+GLNRGLPK+GI R+ G + + KQ + ++ + G DF
Sbjct: 300 QKLCKACVLLDGLNRGLPKLGIGRTTKGGAGADGNGERPGKQKERNRSSLQGKHGNFDF 358
>gi|218191619|gb|EEC74046.1| hypothetical protein OsI_09038 [Oryza sativa Indica Group]
Length = 373
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/329 (85%), Positives = 302/329 (91%), Gaps = 9/329 (2%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGAS
Sbjct: 14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGAS 73
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVLA+VLSELNRRH Y LDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIVS
Sbjct: 74 GGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVS 133
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKD YGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKVDKI TGHNADDIAETVLL
Sbjct: 134 YKDFYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLL 193
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM---------FTYAYFKRLDYF 240
NILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYF
Sbjct: 194 NILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIMYAYFKKLDYF 253
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
STECIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQGTCERCGYI
Sbjct: 254 STECIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYI 313
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSRG 329
SSQK CKACVLL+GLNRGLPK+GI R++G
Sbjct: 314 SSQKLCKACVLLDGLNRGLPKLGIGRTKG 342
>gi|218188588|gb|EEC71015.1| hypothetical protein OsI_02708 [Oryza sativa Indica Group]
Length = 361
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/351 (78%), Positives = 309/351 (88%), Gaps = 6/351 (1%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGAS
Sbjct: 14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYIVFEDEIHQTIVENNLFKPGDRVAIGAS 73
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVLA+VLSELN RH Y LDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKI+S
Sbjct: 74 GGKDSTVLAYVLSELNHRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIIS 133
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKVDKI TGHNADDIAETVLL
Sbjct: 134 YKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLL 193
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
NILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ Y Y+ FS CIYSPN
Sbjct: 194 NILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVI-YPYYAISHIFS--CIYSPN 250
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
AYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQGTCERCGYISSQK CKAC
Sbjct: 251 AYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKAC 310
Query: 310 VLLEGLNRGLPKMGIVRSR---GQNNERTKDMKQNKGTKNIESKQCGTLDF 357
VLL+GLNRGLPK+G+ R++ G +++ + K+ + +++ + G +DF
Sbjct: 311 VLLDGLNRGLPKLGVGRTKGVAGGDSDCEQQAKRPERSRSSLQGKHGNIDF 361
>gi|222618797|gb|EEE54929.1| hypothetical protein OsJ_02482 [Oryza sativa Japonica Group]
Length = 501
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/369 (74%), Positives = 310/369 (84%), Gaps = 24/369 (6%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQIC------------------RECFYEVFEEEIHQV 51
+AG RLC+ C++RKAALKRPKTLEQ+C RECFY VFE+EIHQ
Sbjct: 136 RAGSRLCTRCSERKAALKRPKTLEQLCLYAPHIFRVVCPDVSRQSRECFYIVFEDEIHQT 195
Query: 52 IVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSL 111
IV N LFK G+R+AIGASGGKDSTVLA+VLSELN RH Y LDLFLLS+DEGI+GYRDDSL
Sbjct: 196 IVENNLFKPGDRVAIGASGGKDSTVLAYVLSELNHRHKYCLDLFLLSVDEGITGYRDDSL 255
Query: 112 QTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKV 171
+TVKRNEIQYGLPLKI+SYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKV
Sbjct: 256 ETVKRNEIQYGLPLKIISYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKV 315
Query: 172 DKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTY 231
DKI TGHNADDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ Y
Sbjct: 316 DKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVI-Y 374
Query: 232 AYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ 291
Y+ FS CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQ
Sbjct: 375 PYYAISHIFS--CIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQ 432
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR---GQNNERTKDMKQNKGTKNIE 348
GTCERCGYISSQK CKACVLL+GLNRGLPK+GI R++ G +++ + K+ + +++
Sbjct: 433 GTCERCGYISSQKLCKACVLLDGLNRGLPKLGIGRTKGVAGGDSDCEQQAKRPERSRSSL 492
Query: 349 SKQCGTLDF 357
+ G +DF
Sbjct: 493 QGKHGNVDF 501
>gi|302784632|ref|XP_002974088.1| hypothetical protein SELMODRAFT_100488 [Selaginella moellendorffii]
gi|300158420|gb|EFJ25043.1| hypothetical protein SELMODRAFT_100488 [Selaginella moellendorffii]
Length = 349
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/337 (73%), Positives = 294/337 (87%), Gaps = 9/337 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C +R+ AL+RPKT ++CRECF+++ E+E+H+ I NQLFK GER+AI ASGGKD
Sbjct: 3 RQCEHCGERRQALRRPKTGHKVCRECFFQLLEDEVHETITQNQLFKKGERVAIAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +LSELN RH+YGLDLFLLSIDEGISGYRDDSL+TVKRNE+QYG+PLK++SYK+L
Sbjct: 63 STVLAHILSELNTRHDYGLDLFLLSIDEGISGYRDDSLETVKRNEVQYGIPLKVLSYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIVK IG KNNCTFCGVFRRQALDRGA+L+K DK+ATGHNADD+AET+LLN+LR
Sbjct: 123 YGWTMDEIVKEIGRKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDMAETILLNLLR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARLSRCT I TGE+G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 183 GDIARLSRCTAIMTGEEGALPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
+AR+FIKDLE +RPRAI+DIIKSGE+FRIS++ +MP QG C RCGYISSQK CKACVLL+
Sbjct: 242 YARDFIKDLEAIRPRAIVDIIKSGEDFRISSTARMPVQGVCSRCGYISSQKLCKACVLLD 301
Query: 314 GLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESK 350
GLNRGLP++GI R+RG +K KG +I+ K
Sbjct: 302 GLNRGLPRLGISRTRG--------IKSTKGVADIDEK 330
>gi|302770933|ref|XP_002968885.1| hypothetical protein SELMODRAFT_410069 [Selaginella moellendorffii]
gi|300163390|gb|EFJ30001.1| hypothetical protein SELMODRAFT_410069 [Selaginella moellendorffii]
Length = 349
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/337 (73%), Positives = 293/337 (86%), Gaps = 9/337 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C +R+ AL+RPKT ++CRECF+++ E+E+H+ I NQLFK GER+A+ ASGGKD
Sbjct: 3 RQCEHCGERRQALRRPKTGHKVCRECFFQLLEDEVHETITQNQLFKKGERVAMAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +LSELN RH+YGLDLFLLSIDEGISGYRDDSL+TVKRNE+QYG+PLK++SYK+L
Sbjct: 63 STVLAHILSELNTRHDYGLDLFLLSIDEGISGYRDDSLETVKRNEVQYGIPLKVLSYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIVK IG KNNCTFCGVFRRQALDRGA+L+K DK+ATGHNADD+AET+LLN+LR
Sbjct: 123 YGWTMDEIVKEIGRKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDMAETILLNLLR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARLSRCT I TGE+G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 183 GDIARLSRCTAIMTGEEGALPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
+AR+FIKDLE +RPRAI+DIIKSGE+FRIS++ +MP QG C RCGYISSQK CKACVLL+
Sbjct: 242 YARDFIKDLEAIRPRAIVDIIKSGEDFRISSTARMPVQGVCSRCGYISSQKLCKACVLLD 301
Query: 314 GLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESK 350
GLNRGLP++GI R+RG +K G +I+ K
Sbjct: 302 GLNRGLPRLGISRTRG--------IKSTNGVADIDEK 330
>gi|413939021|gb|AFW73572.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 386
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/350 (76%), Positives = 290/350 (82%), Gaps = 22/350 (6%)
Query: 4 AESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
A +AG RLC C +RKAALKRPKTLEQICRECFY +FE+EIHQ IV N LFKAGER
Sbjct: 9 ARLPPPRAGSRLCVRCGERKAALKRPKTLEQICRECFYIIFEDEIHQTIVQNSLFKAGER 68
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNR+HNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGL
Sbjct: 69 VAIGASGGKDSTVLAYVLSELNRQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGL 128
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLKIVSYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLK DKI TGHNADDI
Sbjct: 129 PLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDI 188
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFK E +++ Y
Sbjct: 189 AETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFK--IENGLIWLY---------HDP 237
Query: 244 CIYSPNAYRGFAREFIKDLERL-----------RPRAILDIIKSGENFRISTSTKMPEQG 292
IYSPNAYRGFAREFIKDLER+ RPRAILDIIKSGENFRIST+T+MPEQG
Sbjct: 238 GIYSPNAYRGFAREFIKDLERMSSLGSVDDECCRPRAILDIIKSGENFRISTTTRMPEQG 297
Query: 293 TCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNK 342
TCERCGYISSQK CKACVLL+GLNRGLPK+GI ++ + + Q K
Sbjct: 298 TCERCGYISSQKLCKACVLLDGLNRGLPKLGIGSTKAGARADSDVVNQKK 347
>gi|168019804|ref|XP_001762434.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686512|gb|EDQ72901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/317 (76%), Positives = 280/317 (88%), Gaps = 1/317 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C ++AAL RP+ +Q+C++CFY FEEEIHQ IV N+LF G+R+A+ ASGGKD
Sbjct: 3 RHCELCKAKRAALVRPRNRQQVCKDCFYTAFEEEIHQTIVDNKLFNRGDRVAVAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA VL+ LN+RH+YGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PL++VSYK L
Sbjct: 63 STVLAHVLTLLNKRHDYGLDLFLLSIDEGIAGYRDDSLETVKRNETQYGIPLEVVSYKTL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIVK IGLKNNCTFCGVFRRQALDRGA+ +K K+ATGHNADD+AET+LLNI+R
Sbjct: 123 YNWTMDEIVKEIGLKNNCTFCGVFRRQALDRGAAKMKAVKMATGHNADDVAETILLNIVR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL+RCT I TGE+G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTEC YSPNAYRG
Sbjct: 183 GDIARLARCTSIITGEEGALPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECTYSPNAYRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
FAREFIKDLE +RP+AILDII SGE FRI ++ KMPEQG CERCGYISSQKWCKACVLL+
Sbjct: 242 FAREFIKDLEAIRPQAILDIISSGERFRIDSTAKMPEQGLCERCGYISSQKWCKACVLLD 301
Query: 314 GLNRGLPKMGIVRSRGQ 330
GLNRGLPK+GI R+RG+
Sbjct: 302 GLNRGLPKLGITRTRGK 318
>gi|6573726|gb|AAF17646.1|AC009978_22 T23E18.11 [Arabidopsis thaliana]
Length = 412
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/355 (72%), Positives = 280/355 (78%), Gaps = 38/355 (10%)
Query: 38 ECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLL 97
+CFYEVFEEEIHQVIVGN+LFK GER+AIGASGGKDS+VLA+VLSELNRRH+YGLDLFLL
Sbjct: 61 KCFYEVFEEEIHQVIVGNRLFKFGERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLL 120
Query: 98 SIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVF 157
SIDEGI+GYRDDSL+TVKRNE+QYGLPL+IVSYKDLYGWTMDEIVK+IGLKNNCTFCGVF
Sbjct: 121 SIDEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 180
Query: 158 RRQ---------------------------------ALDRGASLLKVDKIATGHNADDIA 184
RRQ ALDRGA+LLKVDK+ TGHNADDIA
Sbjct: 181 RRQVRSKFLHSIPSLSKFLQNRLFCFMILCLVEFLKALDRGAALLKVDKLVTGHNADDIA 240
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPF--KYTYEKEIMFTYAYFKRLDYFST 242
ETV+LNILRGDIARLSRCT ITTGEDGPIPR ++ + F + F
Sbjct: 241 ETVVLNILRGDIARLSRCTSITTGEDGPIPRFTRMLISRSWTTSPLNVSCAFSK---FCC 297
Query: 243 ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
CIYSPNAYRGFA EFI DLERLRPRAILDIIKSGE+FRI+T+TKMPEQGTCERCGYISS
Sbjct: 298 FCIYSPNAYRGFACEFINDLERLRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISS 357
Query: 303 QKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
QKWCKACVLLEGLNRGLPKMGI R RG N KD+K K IESKQCG+LDF
Sbjct: 358 QKWCKACVLLEGLNRGLPKMGIGRPRGNVNGDYKDIKARSTAKTIESKQCGSLDF 412
>gi|159486883|ref|XP_001701466.1| adenine nucleotide hydrolase [Chlamydomonas reinhardtii]
gi|226711414|sp|A8JF71.1|CTU1_CHLRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|158271648|gb|EDO97463.1| adenine nucleotide hydrolase [Chlamydomonas reinhardtii]
Length = 357
Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/324 (71%), Positives = 271/324 (83%), Gaps = 3/324 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC CN +A L RPKT EQ+CRECF+ FEEE+HQ IV N+LFK GER+A+ ASGGKD
Sbjct: 4 RLCVRCNTSRAMLNRPKTQEQVCRECFFTAFEEEVHQTIVDNKLFKHGERLAVAASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA ++S LN R+NYGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PLK+VSYK+L
Sbjct: 64 STVLAHIMSTLNARYNYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKVVSYKEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIV IG KNNCTFCGVFRRQALDRGA L+ +KIATGHNADD+AETVLLNILR
Sbjct: 124 YGWTMDEIVSQIGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAETVLLNILR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RL RC I TGED +PR KPFKY YEKEI+ YAY+K+LDYFSTECIY+P A RG
Sbjct: 184 GDVPRLGRCANIITGEDSSLPRVKPFKYAYEKEIVL-YAYYKKLDYFSTECIYAPFAARG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCKACVL 311
FAREFIKDLE RP AI+D+I+S E+F + ++ K+P+ TCERCGYISSQ CKACVL
Sbjct: 243 FAREFIKDLEAARPLAIIDVIRSAEDFVFAAASDEKLPQPRTCERCGYISSQPVCKACVL 302
Query: 312 LEGLNRGLPKMGIVRSRGQNNERT 335
LEGLNRG+P++G+ R+RG+ E+
Sbjct: 303 LEGLNRGMPRLGVSRTRGRRGEKA 326
>gi|302845885|ref|XP_002954480.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
gi|300260152|gb|EFJ44373.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
Length = 455
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/324 (70%), Positives = 269/324 (83%), Gaps = 3/324 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C KA LKRPKT EQ+CRECF+ +FEEE+H+ I +LF+ GER+AI ASGGKD
Sbjct: 4 RLCVRCQTSKAMLKRPKTQEQVCRECFFTLFEEEVHETISATKLFRPGERVAIAASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +++ LN R+ YGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PL +VSYKDL
Sbjct: 64 STVLAHIMTTLNARYGYGLDLFLLSIDEGIAGYRDDSLETVKRNEQQYGIPLTVVSYKDL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIV IG KNNCTFCGVFRRQALDRGA L +KIATGHNADD+AETVLLNILR
Sbjct: 124 YGWTMDEIVAQIGTKNNCTFCGVFRRQALDRGAVLAGANKIATGHNADDVAETVLLNILR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RLSRC I TG D P+PR KPFKY YEKEI+ YAY+K+LDYFSTEC+Y+P A RG
Sbjct: 184 GDVPRLSRCANIITGGDSPLPRVKPFKYAYEKEIVL-YAYYKKLDYFSTECVYAPYAARG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCKACVL 311
FAREFIKDLE +RP AI+D+I+S E+F ++++ K+P+ CERCGYISSQ CKACVL
Sbjct: 243 FAREFIKDLEAVRPMAIIDVIRSAEDFVFTSASEDKLPQPRNCERCGYISSQPVCKACVL 302
Query: 312 LEGLNRGLPKMGIVRSRGQNNERT 335
LEGLNRGLP++G+ R+RG+ E+
Sbjct: 303 LEGLNRGLPRLGVSRTRGKRGEKA 326
>gi|196012435|ref|XP_002116080.1| hypothetical protein TRIADDRAFT_30260 [Trichoplax adhaerens]
gi|190581403|gb|EDV21480.1| hypothetical protein TRIADDRAFT_30260 [Trichoplax adhaerens]
Length = 349
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/309 (72%), Positives = 263/309 (85%), Gaps = 1/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ R+A LKRPKT E++C ECFY+ FE+EIH+ IV N+LF+ GE +A+GASGGKDST
Sbjct: 5 CTNDCNRRAKLKRPKTAEKLCLECFYQAFEDEIHRTIVNNKLFQPGESVAVGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN RHNYG++L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAYVLKLLNERHNYGINLVLLSVDEGITGYRDDSLETVKRNQQQYQLPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV+ IG+KNNCTFCGVFRRQALDRGA L+K DKI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVQKIGMKNNCTFCGVFRRQALDRGAMLVKADKIVTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I TG +G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTEC+YSPNAYRG+A
Sbjct: 185 IARLRRCTAIMTGTEGALPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECVYSPNAYRGYA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R ++KDLE +RP +I+DII SGE I KMPEQGTC +CGYISSQ CKACV+LE L
Sbjct: 244 RAYLKDLESIRPSSIVDIIHSGERMSIKKEVKMPEQGTCSKCGYISSQSICKACVMLESL 303
Query: 316 NRGLPKMGI 324
NRGLPK+ I
Sbjct: 304 NRGLPKLAI 312
>gi|62751601|ref|NP_001015743.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus (Silurana)
tropicalis]
gi|82179029|sp|Q5FW05.1|CTU1_XENTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|58476345|gb|AAH89678.1| MGC107918 protein [Xenopus (Silurana) tropicalis]
Length = 341
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/309 (73%), Positives = 259/309 (83%), Gaps = 1/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C +R+A L+RPKT +C++CF+ FEEEIH IV +LF GE++ IGASGGKDST
Sbjct: 5 CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+ YGLDL L+S+DEGISGYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L V+KI TGHNADDIAETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG +G IPRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTSITTGSEGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE +RP +I+DII SGEN + +MP QGTC RCGYISSQ CKACVLLEGL
Sbjct: 244 RAFLKDLEAIRPSSIMDIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 303
Query: 316 NRGLPKMGI 324
NRGLPK+GI
Sbjct: 304 NRGLPKLGI 312
>gi|340378491|ref|XP_003387761.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Amphimedon
queenslandica]
Length = 325
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/314 (70%), Positives = 263/314 (83%), Gaps = 1/314 (0%)
Query: 11 AGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASG 70
A G C +C +++A++KRPKT + +C+ECF+ VFEEE+HQ I N LF GER+AI ASG
Sbjct: 4 AKGIFCESCKEKRASIKRPKTGQPLCQECFFAVFEEEVHQTITQNGLFNKGERVAIAASG 63
Query: 71 GKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSY 130
GKDSTVLA+++ LN RH+YGLDLFLLS+DEGI+GYRDDSL++V+RN Q G+PL+IVSY
Sbjct: 64 GKDSTVLAYIMKLLNERHHYGLDLFLLSVDEGITGYRDDSLESVRRNRDQMGIPLQIVSY 123
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
LYGWTMD IV+ IG+KNNCTFCGVFRRQALDRGA LLK DKI TGHNADDIAETVL+N
Sbjct: 124 SQLYGWTMDAIVRQIGMKNNCTFCGVFRRQALDRGALLLKADKIVTGHNADDIAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+LRGDIARL RCT I TG DG IPR KPFKY+YEKEI+ YAYFK+LDYFSTEC+YSPNA
Sbjct: 184 VLRGDIARLQRCTHIITGSDGAIPRSKPFKYSYEKEIVM-YAYFKKLDYFSTECVYSPNA 242
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
YRG AR ++KDLE +RP I+DII SG++ + K+P QGTC RCGYISSQ+ CKACV
Sbjct: 243 YRGHARTYLKDLEAIRPSTIIDIIYSGDSLSVKAEIKLPVQGTCSRCGYISSQELCKACV 302
Query: 311 LLEGLNRGLPKMGI 324
LLEGLNRGLP++GI
Sbjct: 303 LLEGLNRGLPRLGI 316
>gi|443718872|gb|ELU09290.1| hypothetical protein CAPTEDRAFT_102102 [Capitella teleta]
Length = 327
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/309 (73%), Positives = 265/309 (85%), Gaps = 2/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +KA LKRPKT + +CRECFY FEEEIH+ I+ +LF G+++AIGASGGKDST
Sbjct: 5 CAACG-KKAILKRPKTADAMCRECFYWAFEEEIHKTIIDAKLFTPGDKVAIGASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R+NY LDL+LLS+DEGI+GYRDDSL+TVKRN QY LPLKIVSY+DLYG
Sbjct: 64 VLAYVMKALNDRYNYRLDLYLLSVDEGITGYRDDSLETVKRNRDQYCLPLKIVSYEDLYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK IGLKNNCTFCGVFRRQALDRGA L + +KI TGHNADDIAETV++NILRGD
Sbjct: 124 WTMDAIVKEIGLKNNCTFCGVFRRQALDRGAMLTECNKIVTGHNADDIAETVIMNILRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG++G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG+A
Sbjct: 184 IARLRRCTAITTGQEGSLPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGYA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R FIKD+E++RP AI+DII SGE+ I KMP QGTC RCGY+SSQ CKAC+LLEGL
Sbjct: 243 RAFIKDVEKVRPSAIIDIIHSGESLSIKKDVKMPVQGTCTRCGYVSSQDVCKACLLLEGL 302
Query: 316 NRGLPKMGI 324
N+G+PK+GI
Sbjct: 303 NKGMPKLGI 311
>gi|148234178|ref|NP_001090363.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus laevis]
gi|123913902|sp|Q05AW7.1|CTU1_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|116063404|gb|AAI23241.1| MGC154488 protein [Xenopus laevis]
Length = 341
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/309 (73%), Positives = 259/309 (83%), Gaps = 1/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C + +A L+RPKT +C++CF+ FEEEIH IV +LF GE++ IGASGGKDST
Sbjct: 5 CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+ YGLDL LLS+DEGISGYRDDSLQTVKRN+ QY LPLKIVSY +LYG
Sbjct: 65 VLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L ++KI TGHNADDIAETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG +G IPRCKP KYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTAITTGSEGAIPRCKPLKYTYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE +RP +I+DII SGEN ++ +MP QGTC RCGYISSQ CKACVLLEGL
Sbjct: 244 RVFLKDLEAIRPSSIIDIIHSGENLSVNEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 303
Query: 316 NRGLPKMGI 324
NRGLPK+GI
Sbjct: 304 NRGLPKLGI 312
>gi|384247346|gb|EIE20833.1| adenine nucleotide hydrolase [Coccomyxa subellipsoidea C-169]
Length = 333
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/318 (70%), Positives = 265/318 (83%), Gaps = 3/318 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
++C TC + KAALKRPKT EQ+C+ CFY E+E+HQ I+ ++LF GER+A+ ASGGKD
Sbjct: 3 KICCTCGKEKAALKRPKTSEQLCKTCFYAALEDEVHQTIIKHKLFSPGERVAVAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L+ LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PLKI+SYK+L
Sbjct: 63 STVLAHILTTLNERYSYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKILSYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIV+ IG KNNCTFCGVFRRQALDRGA+L+K DK+ATGHNADDIAETVLLNILR
Sbjct: 123 YGWTMDEIVRAIGHKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDIAETVLLNILR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RL RC I TGED PR KPFKYTYEKEI+ YA+FK+LDYFSTECIY+P A RG
Sbjct: 183 GDVPRLGRCANIITGEDSAQPRVKPFKYTYEKEIVM-YAFFKKLDYFSTECIYAPFAARG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIST--STKMPEQGTCERCGYISSQKWCKACVL 311
AREF+KDLE +RPRAI D+I+S E FR+ P G C+RCGYISSQ CKACVL
Sbjct: 242 AAREFVKDLELVRPRAICDLIRSAEEFRLDAKGGQSHPVAGKCQRCGYISSQDVCKACVL 301
Query: 312 LEGLNRGLPKMGIVRSRG 329
LEGLN+GLP +G+ R+RG
Sbjct: 302 LEGLNKGLPNLGVSRTRG 319
>gi|348516178|ref|XP_003445616.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Oreochromis niloticus]
Length = 343
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/311 (72%), Positives = 262/311 (84%), Gaps = 3/311 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C++++A LKRPKT +C+ECF+ FEEEIHQ IV +LFK GE + I ASGGKDST
Sbjct: 5 CSSCSEKRAVLKRPKTGHSLCKECFFWTFEEEIHQTIVSAKLFKPGESVGIAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+NYGL+L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVMKVLNERYNYGLELMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK +GLKNNCTFCGVFRRQALDRGA +LKV KI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVKQVGLKNNCTFCGVFRRQALDRGAIMLKVGKICTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
IARL RCT I+T +G +PRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 185 IARLRRCTAISTDSENEGVVPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
+AR ++KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQK CKACVLLE
Sbjct: 244 YARTYLKDLESVRPSSIMDVIHSGENLSVREGVKMPVQGTCSRCGYISSQKLCKACVLLE 303
Query: 314 GLNRGLPKMGI 324
GLNRGLPK+GI
Sbjct: 304 GLNRGLPKLGI 314
>gi|432874965|ref|XP_004072607.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
[Oryzias latipes]
gi|432874967|ref|XP_004072608.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
[Oryzias latipes]
gi|432874969|ref|XP_004072609.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 3
[Oryzias latipes]
Length = 343
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/311 (71%), Positives = 260/311 (83%), Gaps = 3/311 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C +++A LKRPKT +C+ECF+ FEEE+HQ IV LFK+GE +AI ASGGKDST
Sbjct: 5 CSSCVEKRAMLKRPKTGHSLCKECFFMAFEEEVHQTIVNASLFKSGETVAIAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+NYGL+L L+S+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVMKVLNERYNYGLELMLISVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK +G KNNCTFCGVFRRQALDRGA +LKVDKI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVKQVGRKNNCTFCGVFRRQALDRGALMLKVDKICTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
IARL RCT I+T +G +PRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 185 IARLRRCTTISTASEGEGVVPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE +RP +I+DII SGEN + KMP QGTC RCGYISSQ CK+CVLLE
Sbjct: 244 HARTFLKDLESIRPSSIVDIIHSGENLSVREGVKMPVQGTCSRCGYISSQALCKSCVLLE 303
Query: 314 GLNRGLPKMGI 324
GLNRGLPK+GI
Sbjct: 304 GLNRGLPKLGI 314
>gi|47205345|emb|CAF93474.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/312 (71%), Positives = 260/312 (83%), Gaps = 3/312 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS+C ++A LKRPKT +C++CF+ FEEE+HQ IV +LFK GE + I ASGGKDS
Sbjct: 4 LCSSCVDKRAVLKRPKTGHSLCKDCFFWAFEEEVHQTIVAAELFKHGETVGIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LY
Sbjct: 64 TVLAHVMKLLNERYNYGLTLMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IV+ +GLKNNCTFCGVFRRQALDRGA +LKVDKI TGHNADD+AETVL+N+LRG
Sbjct: 124 GWTMDAIVRQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRG 183
Query: 195 DIARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
DIARL RCT I+T DG +PRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYR
Sbjct: 184 DIARLRRCTAISTASEGDGVVPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYR 242
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G+AR F+KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQ CK+CVLL
Sbjct: 243 GYARTFLKDLESVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLL 302
Query: 313 EGLNRGLPKMGI 324
EGLNRGLPK+GI
Sbjct: 303 EGLNRGLPKLGI 314
>gi|405978072|gb|EKC42487.1| Cytoplasmic tRNA 2-thiolation protein 1 [Crassostrea gigas]
Length = 393
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/331 (68%), Positives = 273/331 (82%), Gaps = 2/331 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A LKRPKT + +C+ CFY FEEE+H+ I +LF GE +AIGASGGKDST
Sbjct: 5 CNLC-EAGAILKRPKTGDALCKNCFYFAFEEEVHKTITDAKLFVRGETVAIGASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN+R++YG++L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 64 VLAYVLKALNQRYDYGVNLVLLSVDEGITGYRDDSLETVKRNQQQYDLPLKIVSYEELYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK IGLKNNCTFCGVFRRQALDRGA L+KVD+I TGHNADDIAETV++N+LRGD
Sbjct: 124 WTMDAIVKQIGLKNNCTFCGVFRRQALDRGAILMKVDRIVTGHNADDIAETVIMNVLRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
I RL RCT ITTG +G +PR KPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRGFA
Sbjct: 184 IGRLQRCTAITTGTEGALPRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGFA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R +IKDLE++RP AI+DII SGE+ + + K+P QGTCERCGYISS CKAC+LLEGL
Sbjct: 243 RAYIKDLEKIRPSAIIDIIHSGESLSVKKAVKLPTQGTCERCGYISSNPLCKACILLEGL 302
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKN 346
NRGLP++GI +S + + + + Q + T N
Sbjct: 303 NRGLPRLGIGKSHKERRKLNEMLAQKEATGN 333
>gi|307102713|gb|EFN50982.1| hypothetical protein CHLNCDRAFT_141632 [Chlorella variabilis]
Length = 467
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 265/327 (81%), Gaps = 13/327 (3%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C Q++A L+RPKT EQ+CRECFY EEE+HQ IVG +LF+ GER+A+ ASGGKD
Sbjct: 3 KLCCHCGQQRAVLRRPKTFEQLCRECFYAALEEEVHQTIVGARLFRPGERVAVAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +++ LN+RH YGLDLFLLSIDEGISGYRDDSL TVKRNE QY +PL + SYKDL
Sbjct: 63 STVLAHMMTTLNQRHGYGLDLFLLSIDEGISGYRDDSLDTVKRNEAQYQIPLHVFSYKDL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIV+ IG ++NCTFCGVFRRQALDRGA+L+ KIATGHNADD+AETVLLNI+R
Sbjct: 123 YGWTMDEIVREIGTRSNCTFCGVFRRQALDRGAALVGAHKIATGHNADDVAETVLLNIIR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RL RC I TGED +PR KPFKYTYEKEI+ YAYFKRLDYFSTECIY+P A RG
Sbjct: 183 GDVPRLGRCANIITGEDSSLPRVKPFKYTYEKEIVM-YAYFKRLDYFSTECIYAPYAARG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIS------------TSTKMPEQGTCERCGYIS 301
FAREF+KDLE RP AI+D+I+S E FR+ T +P+ G+C+RCGYIS
Sbjct: 242 FAREFVKDLEAARPSAIVDLIRSAERFRVPGASGSGTGGTGGKGTALPQPGSCQRCGYIS 301
Query: 302 SQKWCKACVLLEGLNRGLPKMGIVRSR 328
SQ CKAC+LLEGLN+GLP++G+ R++
Sbjct: 302 SQPVCKACMLLEGLNKGLPRLGVSRTK 328
>gi|410922313|ref|XP_003974627.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Takifugu
rubripes]
Length = 343
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/312 (71%), Positives = 260/312 (83%), Gaps = 3/312 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS+C ++A LKRPKT +C++CF+ FEEE+HQ I+ +LFK GE + I ASGGKDS
Sbjct: 4 LCSSCLDKRAVLKRPKTGHSLCKDCFFWAFEEEVHQTILTAELFKHGETVGIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LY
Sbjct: 64 TVLAHVMKLLNERYDYGLTLMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IVK +GLKNNCTFCGVFRRQALDRGA +LKVDKI TGHNADD+AETVL+N+LRG
Sbjct: 124 GWTMDAIVKQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRG 183
Query: 195 DIARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
DIARL RCT I+T DG +PRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYR
Sbjct: 184 DIARLRRCTAISTASEGDGVVPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYR 242
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G+AR F+KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQ CK+CVLL
Sbjct: 243 GYARTFLKDLESVRPSSIIDVIHSGENLSVREDVKMPMQGTCSRCGYISSQSLCKSCVLL 302
Query: 313 EGLNRGLPKMGI 324
EGLNRGLPK+GI
Sbjct: 303 EGLNRGLPKLGI 314
>gi|222623719|gb|EEE57851.1| hypothetical protein OsJ_08481 [Oryza sativa Japonica Group]
Length = 671
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/338 (71%), Positives = 261/338 (77%), Gaps = 49/338 (14%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGAS
Sbjct: 14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGAS 73
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGK GI+GYRDDSL+TVKRNEIQYGLPLKIVS
Sbjct: 74 GGK-----------------------------GITGYRDDSLETVKRNEIQYGLPLKIVS 104
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLKVDKI TGHNADDIAETVLL
Sbjct: 105 YKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLL 164
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK------------------EIMFTY 231
NILRGDIARLSRCT ITTGEDGPIPRCKPFK + I +
Sbjct: 165 NILRGDIARLSRCTFITTGEDGPIPRCKPFKIHLREGDCYISLLCNIPYNVILCSIHQLH 224
Query: 232 AYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ 291
Y LD + IYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MPEQ
Sbjct: 225 FYVIILDLMTR--IYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQ 282
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRG 329
GTCERCGYISSQK CKACVLL+GLNRGLPK+GI R++G
Sbjct: 283 GTCERCGYISSQKLCKACVLLDGLNRGLPKLGIGRTKG 320
>gi|41055997|ref|NP_956424.1| cytoplasmic tRNA 2-thiolation protein 1 [Danio rerio]
gi|82177120|sp|Q803X1.1|CTU1_DANRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|28277535|gb|AAH44158.1| Zgc:55395 [Danio rerio]
gi|161611950|gb|AAI55785.1| Zgc:55395 protein [Danio rerio]
gi|182888740|gb|AAI64148.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/311 (72%), Positives = 255/311 (81%), Gaps = 3/311 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C Q++A LKRPKT +C++CF+ FEEEIHQ I LF GE +AIGASGGKDST
Sbjct: 5 CSNCEQKRAVLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVMKLLNERYDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK +GLKNNCTFCGVFRRQALDRGA +L VDKI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
IARL RCT I+T DG IPRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 185 IARLRRCTAISTSSEGDGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE +RP AI+D+I SGE + KMP QGTC RCGYISSQ CK+CVLLE
Sbjct: 244 HARAFLKDLESVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLE 303
Query: 314 GLNRGLPKMGI 324
GLNRGLPK+GI
Sbjct: 304 GLNRGLPKLGI 314
>gi|159155715|gb|AAI54794.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/311 (72%), Positives = 255/311 (81%), Gaps = 3/311 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C Q++A LKRPKT +C++CF+ FEEEIHQ I LF GE +AIGASGGKDST
Sbjct: 5 CSNCEQKRAVLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYG
Sbjct: 65 VLAHVIKLLNERYDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK +GLKNNCTFCGVFRRQALDRGA +L VDKI TGHNADD+AETVL+N+LRGD
Sbjct: 125 WTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
IARL RCT I+T DG IPRCKP KY YEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 185 IARLRRCTAISTSSEGDGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE +RP AI+D+I SGE + KMP QGTC RCGYISSQ CK+CVLLE
Sbjct: 244 HARAFLKDLESVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLE 303
Query: 314 GLNRGLPKMGI 324
GLNRGLPK+GI
Sbjct: 304 GLNRGLPKLGI 314
>gi|260813136|ref|XP_002601275.1| hypothetical protein BRAFLDRAFT_127518 [Branchiostoma floridae]
gi|229286568|gb|EEN57287.1| hypothetical protein BRAFLDRAFT_127518 [Branchiostoma floridae]
Length = 457
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/311 (72%), Positives = 257/311 (82%), Gaps = 4/311 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A LKRPKT +C+ECFY VFE E+HQ I LFK GE +AI ASGGKDST
Sbjct: 5 CGLCEKR-AMLKRPKTGGALCKECFYNVFEAEVHQTITSASLFKRGETVAIAASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA ++ LN RH+YGL LFLLS+DEGI+GYRDDSL+TVKRN+ QY LPLK+VSYK+LYG
Sbjct: 64 VLAHLMKLLNERHDYGLTLFLLSVDEGITGYRDDSLETVKRNQQQYELPLKVVSYKELYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV+ IGLKNNCTFCGVFRRQALDRGA +L VDKI TGHNADD+AETV++N+LRGD
Sbjct: 124 WTMDEIVRQIGLKNNCTFCGVFRRQALDRGAMMLGVDKIVTGHNADDVAETVIMNVLRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I TG +G IPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG A
Sbjct: 184 IARLQRCTAIVTGTEGAIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGHA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRIST--STKMPEQGTCERCGYISSQKWCKACVLLE 313
R ++KDLE +R +I+DII SGE +S KMP QGTC RCGYISS + CKACVLLE
Sbjct: 243 RTYLKDLESIRSTSIIDIIHSGECMSVSVKKDVKMPTQGTCARCGYISSNELCKACVLLE 302
Query: 314 GLNRGLPKMGI 324
GLN+GLPK+GI
Sbjct: 303 GLNKGLPKLGI 313
>gi|260815136|ref|XP_002602330.1| hypothetical protein BRAFLDRAFT_127327 [Branchiostoma floridae]
gi|229287638|gb|EEN58342.1| hypothetical protein BRAFLDRAFT_127327 [Branchiostoma floridae]
Length = 471
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/320 (70%), Positives = 256/320 (80%), Gaps = 13/320 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A LKRPKT +C+ECFY VFE E+HQ I LFK GE +AI ASGGKDST
Sbjct: 5 CGLCEKR-AMLKRPKTGGALCKECFYNVFEAEVHQTITSASLFKRGETVAIAASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK---- 131
VLA ++ LN RH+YGL LFLLS+DEGI+GYRDDSL+TVKRN+ QY LPLK+VSYK
Sbjct: 64 VLAHLMKLLNERHDYGLTLFLLSVDEGITGYRDDSLETVKRNQQQYELPLKVVSYKILST 123
Query: 132 -----DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
+LYGWTMDEIV+ IGLKNNCTFCGVFRRQAL RGA +L VDKI TGHNADD+AET
Sbjct: 124 HSEKQELYGWTMDEIVRQIGLKNNCTFCGVFRRQALYRGAMMLGVDKIVTGHNADDVAET 183
Query: 187 VLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
V++N+LRGDIARL RCT I TG DG IPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIY
Sbjct: 184 VIMNVLRGDIARLQRCTAIVTGTDGAIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIY 242
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST--STKMPEQGTCERCGYISSQK 304
SPNAYRG AR ++KDLE +R +I+DII SGE +S KMP QGTC RCGYISS +
Sbjct: 243 SPNAYRGHARTYLKDLESIRSTSIIDIIHSGECMSVSVKKDVKMPTQGTCARCGYISSNE 302
Query: 305 WCKACVLLEGLNRGLPKMGI 324
CKACVLLEGLN+GLPK+GI
Sbjct: 303 LCKACVLLEGLNKGLPKLGI 322
>gi|427781691|gb|JAA56297.1| Putative 5'-amp-activated protein kinase gamma subunit
[Rhipicephalus pulchellus]
Length = 350
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/314 (67%), Positives = 261/314 (83%), Gaps = 1/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLCS C+ +A LKRPKT + +C+ECFY FE E+H+ IV LF+ G+ +AI ASGGKD
Sbjct: 2 RLCSKCDSSRAVLKRPKTGDALCKECFYVAFETEVHETIVRAHLFQPGDYVAIAASGGKD 61
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN RH YGL L LLSIDEGI+GYRDDSL+TV+ N +YG+PL+++SYKDL
Sbjct: 62 STVLAYVMKLLNERHKYGLRLVLLSIDEGITGYRDDSLKTVESNREEYGIPLEVLSYKDL 121
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGW+MDEIV IG +NNCTFCGVFRRQALDRGA+ L V+K+ TGHNADDIAETVL+N+LR
Sbjct: 122 YGWSMDEIVAQIGRRNNCTFCGVFRRQALDRGAAKLGVNKMVTGHNADDIAETVLMNVLR 181
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT ITTG +G IPR KPFKYTYEKEI+ YA+FK+L+YFSTECIYSPNAYRG
Sbjct: 182 GDIARLQRCTAITTGSEGAIPRSKPFKYTYEKEIVM-YAHFKKLNYFSTECIYSPNAYRG 240
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR ++KDLE +RP +ILDII SGE + ++P++GTC CGYISSQ++CKACVLL+
Sbjct: 241 HARAYLKDLEAIRPTSILDIIHSGECMAVKEGVRLPQKGTCSLCGYISSQQFCKACVLLK 300
Query: 314 GLNRGLPKMGIVRS 327
GLN+G+P++G+ +S
Sbjct: 301 GLNQGVPRLGVGKS 314
>gi|345482904|ref|XP_003424698.1| PREDICTED: hypothetical protein LOC100678584 [Nasonia vitripennis]
Length = 687
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/333 (67%), Positives = 268/333 (80%), Gaps = 8/333 (2%)
Query: 18 TCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVL 77
TCN + A LKRPKT + +C+ECF++ FE EIH IV +LFK G+++AIGASGGKDSTVL
Sbjct: 9 TCN-KNAVLKRPKTGDPMCKECFFDCFETEIHVTIVKAELFKRGDKVAIGASGGKDSTVL 67
Query: 78 AFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWT 137
A++L LN R++YGL+LFLLSIDEGISGYRDDSL+TVK+N Y LPLKI+SYKDLYGW+
Sbjct: 68 AYILKLLNERYDYGLELFLLSIDEGISGYRDDSLETVKQNRDDYQLPLKILSYKDLYGWS 127
Query: 138 MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIA 197
MDEIVK IG KNNCTFCGVFRRQALDRGA+LL D I TGHNADDIAETV++N+LRGD+A
Sbjct: 128 MDEIVKQIGKKNNCTFCGVFRRQALDRGAALLNADMIVTGHNADDIAETVIMNVLRGDLA 187
Query: 198 RLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFARE 257
RLSRCT I T +G IPRCKP KY YEKEI+ YA++K L YFSTEC YSP AYRG RE
Sbjct: 188 RLSRCTHIVTEGEGTIPRCKPLKYAYEKEIVM-YAHYKELVYFSTECSYSPEAYRGHTRE 246
Query: 258 FIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNR 317
F+K +ER+RP AILDII SGE R+ S K+PE+ C RCG+I+SQ+ CKACVLLEGLN
Sbjct: 247 FLKQIERVRPTAILDIIHSGEMVRLKESVKIPERRNCTRCGFIASQEICKACVLLEGLNI 306
Query: 318 GLPKMGIVRSRGQNNERTK--DMKQNKGTKNIE 348
G+PK+GI G++N+ K MK G++NIE
Sbjct: 307 GMPKLGI----GKSNKAKKILGMKVEDGSENIE 335
>gi|198434353|ref|XP_002125738.1| PREDICTED: similar to CG8078 CG8078-PA [Ciona intestinalis]
Length = 347
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 261/329 (79%), Gaps = 6/329 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN +KA LKRPKT +C+ECFY FE EIH IV +LFK GE +AIGASGGKDS
Sbjct: 4 ICHVCNDKKALLKRPKTGHALCKECFYWAFESEIHHTIVTGKLFKEGEIVAIGASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA L LN R+NYGLDL LLSIDEGI+GYRDDSL+TVKRN+ +Y LPL ++SY+ LY
Sbjct: 64 TVLAHTLKVLNERYNYGLDLRLLSIDEGITGYRDDSLETVKRNQQEYDLPLTVLSYETLY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IVK IG KNNCTFCGVFRRQALDRGA +L V+KIATGHNADDIAET+L+NILRG
Sbjct: 124 GWTMDAIVKKIGKKNNCTFCGVFRRQALDRGAMMLGVNKIATGHNADDIAETILMNILRG 183
Query: 195 DIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
DIARL RCT I TG+D IPR KPFKYTYEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 DIARLKRCTAIITGDDPSGIPRVKPFKYTYEKEIV-AYAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR ++KDLE +RP I+DII SGE + K+P Q C RCGYISS + CKAC+LLE
Sbjct: 243 HARAYLKDLESIRPSTIIDIIHSGEMLSVCQGVKLPSQLKCVRCGYISSNELCKACILLE 302
Query: 314 GLNRGLPKMGIVRSRGQNNERTKDMKQNK 342
GLN+G PK+GI G+ ++ T+ +K +K
Sbjct: 303 GLNKGKPKLGI----GKTSKVTQQLKLSK 327
>gi|340712086|ref|XP_003394595.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Bombus
terrestris]
Length = 343
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/342 (66%), Positives = 267/342 (78%), Gaps = 3/342 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT +C+ECF+ FE EIH I +LFK G+++AIGASGGKDST
Sbjct: 5 CSKQCGKCAILKRPKTGHALCKECFFYAFESEIHNTITQGKLFKPGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN R+ YG+DLFLLSIDEGI+GYRDDSLQTV++N+ YGLPLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNDRYQYGIDLFLLSIDEGITGYRDDSLQTVQQNKDDYGLPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA+LL+VD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDEIVAEIGKKNNCTFCGVFRRQALDRGAALLEVDCIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFK+L YFSTECIY+PNAYRG A
Sbjct: 185 IARLQRCTSVITAGADCIRRCKPLKYAYEKEIVM-YAYFKQLIYFSTECIYAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R ++KDLE++RP +ILDII SGE +I S K+PEQ C RCG++SSQ+ CKAC++LEGL
Sbjct: 244 RTYLKDLEKIRPSSILDIIHSGETLQIKESIKLPEQRNCSRCGFVSSQEICKACIMLEGL 303
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
NRGLPK+GI +S +R D N KN E + L+F
Sbjct: 304 NRGLPKLGIGKS--TKVKRVIDSITNDKCKNNEKTKLKNLEF 343
>gi|350398712|ref|XP_003485283.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Bombus
impatiens]
Length = 343
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 267/342 (78%), Gaps = 3/342 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT +C+ECF+ FE EIH I +LFK G+++AIGASGGKDST
Sbjct: 5 CSKQCGKGAILKRPKTGHALCKECFFYAFESEIHNTITQGKLFKPGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN R+ YG+DLFLLSIDEGI+GYRDDSL+TV++N+ YGLPLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNDRYQYGIDLFLLSIDEGITGYRDDSLKTVQQNKDDYGLPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA+LL+VD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDEIVAEIGKKNNCTFCGVFRRQALDRGAALLEVDCIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFK+L YFSTECIY+PNAYRG A
Sbjct: 185 IARLQRCTSVITAGADCIRRCKPLKYAYEKEIVM-YAYFKQLIYFSTECIYAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R ++KDLE++RP +ILDII SGE +I S K+PEQ C RCG++SSQ+ CKAC++LEGL
Sbjct: 244 RTYLKDLEKIRPSSILDIIHSGETLQIKESIKLPEQRNCSRCGFVSSQEICKACIMLEGL 303
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
NRGLPK+GI +S +R D N KN E + L+F
Sbjct: 304 NRGLPKLGIGKS--TKVKRVIDSTTNDKCKNNEKTKLKNLEF 343
>gi|330805982|ref|XP_003290954.1| hypothetical protein DICPUDRAFT_38317 [Dictyostelium purpureum]
gi|325078876|gb|EGC32504.1| hypothetical protein DICPUDRAFT_38317 [Dictyostelium purpureum]
Length = 372
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/322 (67%), Positives = 258/322 (80%), Gaps = 1/322 (0%)
Query: 3 VAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE 62
VA + + K +LC CN ++ LKRPKT + IC+ECFY+VFE+EIH IV N LFK G+
Sbjct: 7 VATTTTPKKKTKLCEICNVQRPVLKRPKTGQMICKECFYQVFEDEIHHTIVSNNLFKRGD 66
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R+AIGASGGKDSTVLA VL+ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY
Sbjct: 67 RVAIGASGGKDSTVLAEVLTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYQ 126
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+PLKI+SYK+LY WTMDEIVK IGLK NCTFCGVFRRQALDRGA +LK +KI TGHNADD
Sbjct: 127 IPLKILSYKELYNWTMDEIVKEIGLKGNCTFCGVFRRQALDRGAVILKANKIVTGHNADD 186
Query: 183 IAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFST 242
IAETVL+N+LRGDI RL RC I TG +G +PR KPFKYTY+KEI+ YAYFK+LDYFST
Sbjct: 187 IAETVLMNLLRGDIPRLQRCVYIITGSEGALPRSKPFKYTYQKEIVM-YAYFKKLDYFST 245
Query: 243 ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
ECIY+PNAYRG AR+F+KDLE +RP I+DII S ENF KMP Q C +CGYI S
Sbjct: 246 ECIYAPNAYRGHARDFLKDLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCTQCGYICS 305
Query: 303 QKWCKACVLLEGLNRGLPKMGI 324
C AC LL+ LN GL K+ +
Sbjct: 306 NDICMACDLLKNLNSGLAKVKL 327
>gi|320169122|gb|EFW46021.1| ATP-binding domain-containing protein 3 [Capsaspora owczarzaki ATCC
30864]
Length = 400
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/315 (66%), Positives = 252/315 (80%), Gaps = 1/315 (0%)
Query: 12 GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
G +LC CN R A L+RPK + CRECFY+ FE EIH IV ++LF G+R+AIGASGG
Sbjct: 2 GKKLCFRCNARSALLRRPKNGQPYCRECFYDAFETEIHTTIVESKLFVPGDRVAIGASGG 61
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDSTVLA+VL LN +NYG++LFLLS+DEGI+GYRDDSL+TVKRNE YG+PLKIVSY+
Sbjct: 62 KDSTVLAYVLKRLNDMYNYGIELFLLSVDEGITGYRDDSLETVKRNEQAYGIPLKIVSYQ 121
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+LYGWTMD IVK +GLKNNCTFCGVFRRQALDRGA+LL +KI TGHNADD+AETV +NI
Sbjct: 122 ELYGWTMDAIVKEVGLKNNCTFCGVFRRQALDRGAALLGANKIVTGHNADDMAETVFMNI 181
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
LRGD RL RCT + TG +PRCKPFK+TYEKEI+ YAYF++LDYFSTEC+YSP A+
Sbjct: 182 LRGDAPRLQRCTNVVTGSSDTLPRCKPFKFTYEKEIVL-YAYFQKLDYFSTECVYSPQAF 240
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG AR F+KDLE LRP +I+D+I++GE + C RCGY+SSQ CKACVL
Sbjct: 241 RGHARAFLKDLEALRPSSIVDVIRAGEAIEVVEEVLQSTPNRCVRCGYLSSQSLCKACVL 300
Query: 312 LEGLNRGLPKMGIVR 326
LEGLNRGLP++GI R
Sbjct: 301 LEGLNRGLPQLGIGR 315
>gi|225711790|gb|ACO11741.1| ATP-binding domain-containing protein 3 [Caligus rogercresseyi]
Length = 335
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/334 (67%), Positives = 266/334 (79%), Gaps = 8/334 (2%)
Query: 14 RLCST--CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
R CS+ C+ KA LKRPKT + +C+ECFY FE EIH IV N+LF GER+AIGASGG
Sbjct: 3 RPCSSKECDS-KAILKRPKTGDALCKECFYTAFETEIHCTIVTNKLFTPGERVAIGASGG 61
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDSTVLA + LN R+NYGLDLFLLSIDEGISGYRDDSL+TVKRN YGLPLKI+SY+
Sbjct: 62 KDSTVLAHTMKTLNDRYNYGLDLFLLSIDEGISGYRDDSLETVKRNRDTYGLPLKILSYQ 121
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
DLYGWTMD IV+ +G KNNCTFCGVFRRQALDRGA+LL VDKIATGHNADDIAETV++N+
Sbjct: 122 DLYGWTMDRIVEEVGRKNNCTFCGVFRRQALDRGAALLAVDKIATGHNADDIAETVIMNV 181
Query: 192 LRGDIARLSRCT--LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGDI RLSRC + +GE IPR KPFKY YEKEI+ YAYFK+LDYFSTECIYSP
Sbjct: 182 LRGDIGRLSRCAAPITGSGEGETIPRVKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPE 240
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCK 307
AYRG AR FIKDLE++RP +I+DII SGE + S ++P QG C +CGYISS + CK
Sbjct: 241 AYRGHARAFIKDLEKIRPSSIMDIIHSGEQIVMKDSVIERLPTQGKCSKCGYISSMEVCK 300
Query: 308 ACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQN 341
AC++LEGLN+GLP++G+ +S +R K K++
Sbjct: 301 ACIMLEGLNKGLPRLGVGKSSKVVPQRKKIAKRD 334
>gi|307175621|gb|EFN65530.1| ATP-binding domain-containing protein 3 [Camponotus floridanus]
Length = 336
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/334 (66%), Positives = 262/334 (78%), Gaps = 5/334 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CST R A LKRPKT + +C++CF+ FE EIH IV +LFK G ++AIGASGGKDST
Sbjct: 5 CSTKCGRDAILKRPKTGDTLCKDCFFLAFETEIHDTIVNGKLFKPGNKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN RH YGLDLFLLSIDEGI+GYRDDSL+TV +N YG+PLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNERHKYGLDLFLLSIDEGITGYRDDSLKTVAQNRDDYGIPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDSIVTEIGRKNNCTFCGVFRRQALDRGAAILGVDCIVTGHNADDIAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFK L YFSTEC+Y+PNAYRG A
Sbjct: 185 IARLQRCTSVITAGADSIMRCKPLKYAYEKEIVM-YAYFKHLVYFSTECVYAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP +I+DII SGE ++ S KMPE+ C RCG++SSQ+ CKACVLLEGL
Sbjct: 244 RAFLKDLEKIRPSSIIDIIHSGEQLQVKDSIKMPERRNCTRCGFVSSQEICKACVLLEGL 303
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIES 349
NRGLPK+GI G++N+ K M +K + +S
Sbjct: 304 NRGLPKLGI----GKSNKAKKIMDLDKRNEQQQS 333
>gi|332019893|gb|EGI60354.1| Cytoplasmic tRNA 2-thiolation protein 1 [Acromyrmex echinatior]
Length = 339
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/334 (66%), Positives = 264/334 (79%), Gaps = 3/334 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CST + A LKRPKT + +C+ECF+ FE EIH I+ +LFK G+++AIGASGGKDST
Sbjct: 7 CSTKCGKNAILKRPKTGDTLCKECFFLAFETEIHDTIINGKLFKPGDKVAIGASGGKDST 66
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN R+ Y LDLFLLSIDEGI+GYRDDSL+TV RN+ YG+PLKI+SYK+LYG
Sbjct: 67 VLAYVLKTLNERYKYELDLFLLSIDEGITGYRDDSLKTVTRNKDDYGIPLKILSYKELYG 126
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG KNNCTFCGVFRRQALDRGA++LKVD IATGHNADDIAETVL+NILRGD
Sbjct: 127 WTMDSIVAEIGRKNNCTFCGVFRRQALDRGAAILKVDCIATGHNADDIAETVLMNILRGD 186
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
IARL RCT +ITTG D I RCKP KY YEKEI+ YAYFK L YFSTECIY+PNAYRG
Sbjct: 187 IARLQRCTSVITTGADS-IMRCKPLKYAYEKEIVM-YAYFKNLVYFSTECIYAPNAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP +I+DII SGE ++ + KMPE+ C CG++SSQ+ CKACVLLEG
Sbjct: 245 ARAFLKDLEKIRPSSIIDIIHSGEQLQVKANVKMPERRNCTLCGFVSSQEICKACVLLEG 304
Query: 315 LNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIE 348
LNRGLPK+GI +S M + +NI+
Sbjct: 305 LNRGLPKLGIGKSSKAKKIMNLHMDKKNKMQNID 338
>gi|291224155|ref|XP_002732071.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Saccoglossus kowalevskii]
Length = 353
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/309 (72%), Positives = 258/309 (83%), Gaps = 2/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ KA LKRPKT + +CRECF+ VFE EIH I+ LF AGE +AIGASGGKDST
Sbjct: 5 CAACSG-KAVLKRPKTGDALCRECFFHVFETEIHHTILDANLFTAGETVAIGASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN +++YGL L LLS+DEGI+GYRDDSL TVKRN+ QY LPLKIVSY++LYG
Sbjct: 64 VLAYVLKLLNDKYDYGLKLILLSVDEGITGYRDDSLTTVKRNQKQYDLPLKIVSYEELYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IVK IGLKNNCTFCGVFRRQALDRGA L++ DKI TGHNADDIAETVL+N+LRGD
Sbjct: 124 WTMDAIVKEIGLKNNCTFCGVFRRQALDRGAVLVEADKIVTGHNADDIAETVLMNVLRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT ITTG +G +PRCKP KYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG+A
Sbjct: 184 IARLRRCTSITTGNEGYLPRCKPLKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGYA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE +R +I+DII SGE+ I KMP Q TC +CGYISS K CKACVLLEGL
Sbjct: 243 RAFLKDLEAIRSSSIIDIIHSGESLSIKKDVKMPTQMTCLQCGYISSNKVCKACVLLEGL 302
Query: 316 NRGLPKMGI 324
N+GLPK+GI
Sbjct: 303 NKGLPKLGI 311
>gi|66811248|ref|XP_639332.1| ATP-binding domain-containing protein 3 [Dictyostelium discoideum
AX4]
gi|161788992|sp|Q94480.2|CTU1_DICDI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|60467891|gb|EAL65904.1| ATP-binding domain-containing protein 3 [Dictyostelium discoideum
AX4]
Length = 360
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/320 (66%), Positives = 255/320 (79%), Gaps = 1/320 (0%)
Query: 5 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI 64
E+ + K +LC CN + LKRPKT E IC+ECFY VFE+EIH I+ N LFK G+R+
Sbjct: 2 ENTATKKKSKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRV 61
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
AIGASGGKDSTVLA +++ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +P
Sbjct: 62 AIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYQIP 121
Query: 125 LKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
LKI+SYK+LY WTMD+IVK IGLK NCTFCGVFRRQALDRGA +LK +KI TGHNADDIA
Sbjct: 122 LKILSYKELYNWTMDDIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNADDIA 181
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
ETVL+N+LRGDI RL RC I TG +G +PR KPFKYTY+KEI+ YAYFK+LDYFSTEC
Sbjct: 182 ETVLMNLLRGDIPRLQRCVNIITGSEGALPRSKPFKYTYQKEIVM-YAYFKKLDYFSTEC 240
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
IY+PNAYRG AR+F+KDLE +RP I+DII S ENF KMP Q C +CGYI S
Sbjct: 241 IYAPNAYRGHARDFLKDLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSND 300
Query: 305 WCKACVLLEGLNRGLPKMGI 324
C AC LL+ LN GL K+ +
Sbjct: 301 ICMACDLLKNLNSGLAKVKL 320
>gi|383857002|ref|XP_003703995.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Megachile
rotundata]
Length = 349
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/312 (68%), Positives = 256/312 (82%), Gaps = 1/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT +C+ECF+ FE EIH IV +LFK G+++AIGASGGKDST
Sbjct: 5 CSINCGKAAILKRPKTGHALCKECFFLAFENEIHNTIVEGKLFKVGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN RH YG++LFLLSIDEGI+GYRDDSL+TV++N+ YGLPLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNERHKYGIELFLLSIDEGITGYRDDSLKTVQQNKEDYGLPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA++L VD IATGHNADDIAETV++NILRGD
Sbjct: 125 WTMDEIVAEIGRKNNCTFCGVFRRQALDRGAAMLNVDCIATGHNADDIAETVIMNILRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
I+RL RCT I T I RCKP KY YEKEI+ YAYFK L YFSTEC+++PNAYRG A
Sbjct: 185 ISRLQRCTSIITAGADCIKRCKPLKYAYEKEIVM-YAYFKHLVYFSTECVFAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP +ILDII SGE ++ + KMPE+ TC RCG++SSQ+ CKAC++LEGL
Sbjct: 244 RTFLKDLEKIRPSSILDIIHSGETMQVKDTIKMPERRTCSRCGFVSSQEICKACIMLEGL 303
Query: 316 NRGLPKMGIVRS 327
NRGLPK+GI +S
Sbjct: 304 NRGLPKLGIGKS 315
>gi|391337610|ref|XP_003743160.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Metaseiulus occidentalis]
Length = 361
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/327 (66%), Positives = 263/327 (80%), Gaps = 5/327 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C++ A LKRPKT + +CRECF++ FE+EIH I LF G+ +AI ASGGKDST
Sbjct: 4 CTKCSKNIACLKRPKTGDALCRECFFDAFEQEIHWTITTFNLFSRGDYVAIAASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA ++ LN R++YGL L LLSIDEGI+GYRDDSL+TVKRNE+QYG+PLKI+SY DLYG
Sbjct: 64 VLAHLMKVLNDRYDYGLKLVLLSIDEGITGYRDDSLETVKRNELQYGIPLKILSYNDLYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IV +G K+NCTFCGVFRRQALDRGA L VDKI TGHNADDIAETV++N+LRGD
Sbjct: 124 WTMDKIVAAVGKKSNCTFCGVFRRQALDRGAMQLGVDKIVTGHNADDIAETVIMNVLRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I TG +G IPR KPFKYTYEKEI+ YA+FK+LDYFSTECIYSPNAYRG A
Sbjct: 184 IARLQRCTSIVTGSEGLIPRSKPFKYTYEKEIVM-YAHFKKLDYFSTECIYSPNAYRGHA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R +IK+LE P +IL+II SGE + TK+P +GTC RCGYISSQ+ CKACV+LEGL
Sbjct: 243 RAYIKNLELQDPLSILNIIYSGECMSLREGTKLPSKGTCSRCGYISSQEVCKACVMLEGL 302
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNK 342
N+G+P++G+ G+ ++ K M+Q K
Sbjct: 303 NKGVPRLGV----GKTSKVIKKMEQLK 325
>gi|403346882|gb|EJY72848.1| hypothetical protein OXYTRI_06021 [Oxytricha trifallax]
Length = 315
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 254/312 (81%), Gaps = 2/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN+R A +KRPK +C ECFY VFEEEIH I N LFK GERIAIGASGGKDST
Sbjct: 3 CELCNERNAKIKRPKNQMPVCHECFYMVFEEEIHHTITTNTLFKRGERIAIGASGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V++ LN+R++YGL+L LLS+DEGI GYRDDSL+TVK+N+I Y LPL IVSYKDLYG
Sbjct: 63 VLAHVMTTLNKRYDYGLNLELLSVDEGIIGYRDDSLETVKKNQITYDLPLTIVSYKDLYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIVKVIGL NNCTFCGVFRRQALDRGA L+K DKI TGHNADDIAETV +NILRGD
Sbjct: 123 WTMDEIVKVIGLTNNCTFCGVFRRQALDRGAMLIKADKIVTGHNADDIAETVYMNILRGD 182
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
RL +C I TG + +PRCKPFKYTYEKEI+ YA+FK+LDYF+TECIYSPNAYRG+
Sbjct: 183 FFRLHKCVDIMTGREDALPRCKPFKYTYEKEIVM-YAHFKKLDYFTTECIYSPNAYRGYV 241
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTS-TKMPEQGTCERCGYISSQKWCKACVLLEG 314
RE IKDLE++RP I DII SGE+ +I TS + P++ C++CG+++S + CKAC+LL+G
Sbjct: 242 RELIKDLEKVRPSIITDIIHSGESMKIDTSNVQFPKKMRCKQCGFVASNELCKACILLDG 301
Query: 315 LNRGLPKMGIVR 326
LN+G ++ I R
Sbjct: 302 LNKGKARVAIGR 313
>gi|225719516|gb|ACO15604.1| ATP-binding domain-containing protein 3 [Caligus clemensi]
Length = 335
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/320 (68%), Positives = 263/320 (82%), Gaps = 8/320 (2%)
Query: 14 RLCST--CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
R CS+ C+ KA LKRPKT + +C+ECF+ FE EIH IV N+LF GER+AIGASGG
Sbjct: 3 RPCSSQGCDS-KAILKRPKTGDALCKECFFTAFETEIHCTIVTNKLFSHGERVAIGASGG 61
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDSTVLA + LN R+NYGLDLFLLSIDEGISGYRDDSL+TVKRN YGLPLKI+SY+
Sbjct: 62 KDSTVLAHTMKTLNDRYNYGLDLFLLSIDEGISGYRDDSLETVKRNRDTYGLPLKILSYE 121
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
DLYGWTMD IV+ +G KNNCTFCGVFRRQALDRGA++L+V+KIATGHNADDIAETV++N+
Sbjct: 122 DLYGWTMDRIVEEVGRKNNCTFCGVFRRQALDRGAAILEVNKIATGHNADDIAETVMMNV 181
Query: 192 LRGDIARLSRCT--LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGDI RLSRCT + +GE IPR KPFKY YEKEI+ YAYFK+LDYF+TECIYSP+
Sbjct: 182 LRGDIGRLSRCTAPITGSGEGETIPRVKPFKYAYEKEIVM-YAYFKKLDYFTTECIYSPD 240
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCK 307
AYRG AR FIKDLE++RP +I+DII SGE + S ++P QG C +CGYISS + CK
Sbjct: 241 AYRGHARAFIKDLEKIRPSSIMDIIHSGEQIVMKDSVIERLPTQGKCSKCGYISSMEVCK 300
Query: 308 ACVLLEGLNRGLPKMGIVRS 327
AC++LEGLN+GLP++G+ +S
Sbjct: 301 ACIMLEGLNKGLPRLGVGKS 320
>gi|66505934|ref|XP_397328.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Apis
mellifera]
Length = 343
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 270/342 (78%), Gaps = 3/342 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT +C+ECF+ FE EIH IV +LFK+G+++AIGASGGKDST
Sbjct: 5 CSRKCGKDAILKRPKTGHALCKECFFFAFESEIHNTIVQGKLFKSGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN ++ YG+DLFLLSIDEGI+GYRDDSL+TV++N+ YGLPLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNNKYQYGIDLFLLSIDEGITGYRDDSLKTVQQNKNDYGLPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA+LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDEIVAEIGKKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFK+L YFSTECI++PNAYRG A
Sbjct: 185 IARLQRCTSVITAGADCIRRCKPLKYAYEKEIVM-YAYFKQLVYFSTECIFAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP +ILDII SGE +I + K+PE+ C RCG++SSQ+ CKAC++LEGL
Sbjct: 244 RTFLKDLEKVRPSSILDIIHSGETLQIKENIKLPERRNCSRCGFVSSQEICKACIMLEGL 303
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTLDF 357
NRGLPK+GI +S ++ D N ++N + + +L+F
Sbjct: 304 NRGLPKLGIGKS--TKVKKVIDSVANNKSENNDKIKLKSLEF 343
>gi|281212130|gb|EFA86290.1| ATP-binding domain-containing protein 3 [Polysphondylium pallidum
PN500]
Length = 385
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 254/325 (78%), Gaps = 10/325 (3%)
Query: 9 KKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGA 68
+K +LC CN ++ LKRPKT + IC+ECFY+VFE+EIH IV NQLF+ G+++AIGA
Sbjct: 18 RKRTSKLCEICNVQRPVLKRPKTSQMICKECFYQVFEDEIHNTIVSNQLFQRGDKVAIGA 77
Query: 69 SGGK---------DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEI 119
SGG DSTVLA +++ LN+RH+YGLDLFLLSIDEGI+GYRDDSL+TVKRN+
Sbjct: 78 SGGITINIVFNLIDSTVLAEIMTLLNKRHDYGLDLFLLSIDEGITGYRDDSLETVKRNQQ 137
Query: 120 QYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
QY +PLKI+SYK+LY WTMDEIVK IGLKNNCTFCGVFRRQALDRGA LL +KI TGHN
Sbjct: 138 QYQIPLKILSYKELYDWTMDEIVKEIGLKNNCTFCGVFRRQALDRGAVLLGANKIVTGHN 197
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
ADDIAET+L+N+LRGD+ RL RC I TG +G +PR KPFKYTY+KEI+ YAYFK+LDY
Sbjct: 198 ADDIAETILMNLLRGDVPRLQRCVNIVTGSEGTLPRSKPFKYTYQKEIVM-YAYFKKLDY 256
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGY 299
F+TECIY+PNAYRG AR+F+KDLE RP I+DII S ENF T+MP Q C RCGY
Sbjct: 257 FTTECIYAPNAYRGHARDFLKDLEAARPSVIIDIIHSAENFAFRDETRMPVQRNCNRCGY 316
Query: 300 ISSQKWCKACVLLEGLNRGLPKMGI 324
I S C AC LL LN G+ K+ +
Sbjct: 317 ICSNDICMACDLLRNLNAGMAKVAL 341
>gi|393222195|gb|EJD07679.1| hypothetical protein FOMMEDRAFT_72062 [Fomitiporia mediterranea
MF3/22]
Length = 365
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/312 (69%), Positives = 249/312 (79%), Gaps = 3/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN KA LKRPKT +QIC+ECF+ VFE E+H I +LFK G+R+AIGASGGKDST
Sbjct: 6 CALCNNAKAILKRPKTGQQICKECFFYVFETEVHNTITDAKLFKPGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R+NYGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAYVMKTLNERYNYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYSMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAIVSKVGKKNNCTFCGVFRRQALDRGATTLNVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCTLI T + I R KPFKY YEKEI+ YAYFKRLDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTLICTQGEDTIRRSKPFKYAYEKEIVM-YAYFKRLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLE 313
R F+KDLE RP AI+DII SGE F + + + Q TCERCGY+SS CKAC LLE
Sbjct: 245 RVFLKDLEAARPSAIIDIIHSGEAFELREEVRKGQKAQQTCERCGYMSSNPLCKACTLLE 304
Query: 314 GLNRGLPKMGIV 325
GL RG+ + GI
Sbjct: 305 GLERGIAEAGIT 316
>gi|225712834|gb|ACO12263.1| ATP-binding domain-containing protein 3 [Lepeophtheirus salmonis]
gi|290561359|gb|ADD38080.1| Cytoplasmic tRNA 2-thiolation protein 1 [Lepeophtheirus salmonis]
Length = 337
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/330 (66%), Positives = 260/330 (78%), Gaps = 8/330 (2%)
Query: 14 RLCSTCN-QRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
R+CS+ + KA L+RPKT + +C+ECFY FE EIH IV N+LF GER+AIGASGGK
Sbjct: 3 RICSSKECETKAILRRPKTGDALCKECFYLAFETEIHLTIVTNKLFTPGERVAIGASGGK 62
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA L LN R++YGLDLFLLSIDEGISGYRDDSL+TVKRN Y LPLKI+SY+D
Sbjct: 63 DSTVLAHTLKTLNDRYSYGLDLFLLSIDEGISGYRDDSLETVKRNRDTYKLPLKILSYED 122
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LYGWTMD IV+ +G KNNCTFCGVFRRQALDRGA+LLKV+KIATGHNADDIAET+++N+L
Sbjct: 123 LYGWTMDRIVQEVGRKNNCTFCGVFRRQALDRGAALLKVNKIATGHNADDIAETIMMNVL 182
Query: 193 RGDIARLSRCTLITT----GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
RGD+ RLSRC T GE IPR KPFKY YEKEI+ YAYFK+LDYFSTECIYSP
Sbjct: 183 RGDVGRLSRCAAPITGSNLGEGETIPRVKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWC 306
AYRG AR FIKDLE +RP AI+DII SGE + S ++P QG C +CGYISS + C
Sbjct: 242 EAYRGHARAFIKDLESIRPSAIMDIIHSGEQMVMKDSVMERLPSQGKCSKCGYISSMEIC 301
Query: 307 KACVLLEGLNRGLPKMGIVRSRGQNNERTK 336
KAC++LEGLN+G+P++G+ +S R K
Sbjct: 302 KACIMLEGLNKGIPRLGVGKSSKVAPARRK 331
>gi|380030456|ref|XP_003698864.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Apis
florea]
Length = 343
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/312 (68%), Positives = 255/312 (81%), Gaps = 1/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT +C+ECF+ FE EIH I+ +LFK+G+++AIGASGGKDST
Sbjct: 5 CSRKCGKDAILKRPKTGHALCKECFFFAFESEIHNTIIQGKLFKSGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN ++ YG+DLFLLSIDEGI+GYRDDSL+TV++N+ YGLPLKI+SYK+LYG
Sbjct: 65 VLAYVLKTLNNKYQYGIDLFLLSIDEGITGYRDDSLKTVQQNKNDYGLPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA+LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDEIVAEIGKKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFKRL YFSTECI++PNAYRG A
Sbjct: 185 IARLQRCTSVITAGADCIRRCKPLKYAYEKEIVM-YAYFKRLVYFSTECIFAPNAYRGHA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP +I DII SGE I + K+PE+ C RCG++SSQ+ CKAC++LEGL
Sbjct: 244 RTFLKDLEKIRPSSIFDIIHSGETLEIKENIKLPERRNCSRCGFVSSQEICKACIMLEGL 303
Query: 316 NRGLPKMGIVRS 327
NRGLPK+GI +S
Sbjct: 304 NRGLPKLGIGKS 315
>gi|384494206|gb|EIE84697.1| cytoplasmic tRNA 2-thiolation protein 1 [Rhizopus delemar RA
99-880]
Length = 377
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/321 (66%), Positives = 254/321 (79%), Gaps = 8/321 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN+ +A LKRPKT +QIC++CF+ VFE EIH I LFK GE++AIGASGGKD
Sbjct: 3 KLCVLCNENRAVLKRPKTGQQICQQCFFYVFETEIHHTIQDTNLFKRGEKVAIGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA V+ LN R++YGLDL+LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY +L
Sbjct: 63 STVLAHVMKTLNDRYDYGLDLYLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYHEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGW+MDEIV+ +G KNNCT+CGVFRRQALDRG+++L + I TGHNADDIAET+L+NI R
Sbjct: 123 YGWSMDEIVREVGRKNNCTYCGVFRRQALDRGSAMLGIKHIVTGHNADDIAETILMNIFR 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 183 GDIARLGRCTEIVTQGESEIKRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
+AR F+KDLE +RP AI+ F I + TKMP TC RCGY+SS CKAC+LLE
Sbjct: 242 YARTFLKDLESVRPSAII-------AFEIKSDTKMPTSMTCTRCGYMSSNSICKACMLLE 294
Query: 314 GLNRGLPKMGIVRSRGQNNER 334
GLNRGLP+MGI + E+
Sbjct: 295 GLNRGLPQMGIGKQSKAQKEQ 315
>gi|328869324|gb|EGG17702.1| ATP-binding domain-containing protein 3 [Dictyostelium
fasciculatum]
Length = 396
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/312 (66%), Positives = 249/312 (79%), Gaps = 1/312 (0%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C ++ LKRPKT + IC+ECFY++FE+EIH I+ N LF+ G+R+AIGASGGK
Sbjct: 30 AKLCELCKVQRPVLKRPKTGQMICKECFYQIFEDEIHNTIISNNLFQRGDRVAIGASGGK 89
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +++ LN+RH+YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SYK+
Sbjct: 90 DSTVLAEIMTTLNKRHDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQIPLKILSYKE 149
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV IGLKNNCTFCGVFRRQALDRGA LL +KI TGHNADDIAETVL+N+L
Sbjct: 150 LYNWTMDEIVAEIGLKNNCTFCGVFRRQALDRGAVLLGANKIVTGHNADDIAETVLMNLL 209
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
RGDI RL RC I TG +G +PR KPFKYTY+KEI+ YAYFK+LDYF+TECIY+PNAYR
Sbjct: 210 RGDIPRLQRCINIVTGSEGALPRSKPFKYTYQKEIVM-YAYFKKLDYFTTECIYAPNAYR 268
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G AR+F+KDLE +RP I+DII+S ENF KMP Q C CGYI S + C AC L
Sbjct: 269 GHARDFLKDLEAVRPSIIIDIIQSAENFHFRDEIKMPVQRNCNLCGYICSNEICMACDFL 328
Query: 313 EGLNRGLPKMGI 324
+ LN G K +
Sbjct: 329 KNLNSGKAKYAL 340
>gi|290987162|ref|XP_002676292.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
gi|284089893|gb|EFC43548.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
Length = 368
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 255/325 (78%), Gaps = 12/325 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN R AALKRPK ICRECF+++FE EIH+ I+ N LFK G+++AI ASGGKDST
Sbjct: 5 CANCNSRNAALKRPKNGALICRECFFDLFETEIHETIINNNLFKPGDKVAIAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA ++ LN R+NYGLDL+LLSIDEGI GYRDDSL+TVKRN QY +PLKI+SYK+LYG
Sbjct: 65 ALAHIMKVLNERYNYGLDLYLLSIDEGIKGYRDDSLETVKRNREQYQVPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+MDEIV+ IGLKNNCTFCGVFRRQALDRG LKVDK+ TGHNADDIAETVL+NILRGD
Sbjct: 125 WSMDEIVQQIGLKNNCTFCGVFRRQALDRGCEQLKVDKMVTGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGEDG--PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
I RL RC I T ++G IPR KPFKYTY+KEI+ YAYFK+LDYFSTEC YSPNAYRG
Sbjct: 185 IGRLERCVDIITHDEGGFSIPRAKPFKYTYQKEIVL-YAYFKKLDYFSTECSYSPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--------CERCGYISSQKW 305
ARE IKDLE+LRP+ I+DI+KS E F + T + E T C +CGYISSQ+
Sbjct: 244 HARELIKDLEQLRPQTIIDIVKSAEQFEFTNET-ISEDSTVKKRTLMNCVKCGYISSQEL 302
Query: 306 CKACVLLEGLNRGLPKMGIVRSRGQ 330
C+ACV LEGLN+G ++ + S GQ
Sbjct: 303 CRACVFLEGLNKGTARITLYSSHGQ 327
>gi|328767927|gb|EGF77975.1| hypothetical protein BATDEDRAFT_17572 [Batrachochytrium
dendrobatidis JAM81]
Length = 332
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/326 (67%), Positives = 253/326 (77%), Gaps = 13/326 (3%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
+K P TL C+ECFY E+ +H IV N LFK G+R+AI ASGGKDSTVLA VL LN
Sbjct: 2 VKIPSTLAPSCKECFYFHLEKNVHNTIVQNALFKPGDRVAIAASGGKDSTVLAHVLCILN 61
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
+R+NYGLDL LLSIDEGI+GYRDDSL+TVKRNE QYG+PLKI+SY+DLYGWTMD IVK I
Sbjct: 62 KRYNYGLDLCLLSIDEGITGYRDDSLETVKRNEQQYGIPLKILSYQDLYGWTMDAIVKQI 121
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
GLKNNCTFCGVFRRQALDRGA+LLKVD + TGHNADDIAETVL+N LRGD+ARL RCT I
Sbjct: 122 GLKNNCTFCGVFRRQALDRGAALLKVDHVVTGHNADDIAETVLMNFLRGDLARLQRCTSI 181
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERL 265
T + IPR KPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +
Sbjct: 182 KTATNEVIPRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGYARAFLKDLESI 240
Query: 266 RPRAILDIIKSGENFRISTSTKMPEQG-------TCERCGYISSQKWCKACVLLEGLNRG 318
R ILDII SGE++++ K+ C RCGY+SS CKACVLLEGLNRG
Sbjct: 241 RSSVILDIIHSGESYQLKQQPKINVVANGVIAVRNCNRCGYMSSNTLCKACVLLEGLNRG 300
Query: 319 LPKMGIVRSRGQNNERTKDMKQNKGT 344
LPK+GI N ++ + M NK T
Sbjct: 301 LPKLGI-----GNTDKIRRMHDNKTT 321
>gi|403417339|emb|CCM04039.1| predicted protein [Fibroporia radiculosa]
Length = 394
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/314 (68%), Positives = 249/314 (79%), Gaps = 3/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C+ CN+ +A LKRPKT +QICRECF+ VFE E+H I LFK G+++AIGASGGKD
Sbjct: 4 RSCALCNKARAILKRPKTGQQICRECFFWVFETEVHNTITEAALFKPGDKVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R+NYGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +L
Sbjct: 64 STVLAYVMKTLNDRYNYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG KNNCTFCGVFRRQALDRGAS L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDAIVSQIGKKNNCTFCGVFRRQALDRGASALHVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCTLI T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTLICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F ++ K + Q TC+RCGY+SS CKAC L
Sbjct: 243 HARAFLKDLEAARPSAIIDIIHSGEAFEVTEVIKATQKVQQTCKRCGYMSSNYLCKACTL 302
Query: 312 LEGLNRGLPKMGIV 325
LEGL RG +V
Sbjct: 303 LEGLERGGASPSVV 316
>gi|393246507|gb|EJD54016.1| hypothetical protein AURDEDRAFT_110669 [Auricularia delicata
TFB-10046 SS5]
Length = 357
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/315 (66%), Positives = 251/315 (79%), Gaps = 3/315 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ +A +KRPKT +QIC+ECF+ VFE E+H I +LFK G+R+AIGASGGKDST
Sbjct: 6 CALCHTARAIIKRPKTGQQICKECFFYVFETEVHNTIADAKLFKPGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN++QYGLPLKI+ Y +LYG
Sbjct: 66 VLAYVMKTLNERYAYGLELFLLSIDEGITGYRDDSLETVKRNQVQYGLPLKILGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD +V +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAVVAQVGKKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCTLI T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIY+P+AYRG A
Sbjct: 186 IARLGRCTLICTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYAPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRIS--TSTKMPEQGTCERCGYISSQKWCKACVLLE 313
R F+K+LE RP AI+DII SGE F ++ + M Q TC+RCGYISS CKAC LLE
Sbjct: 245 RAFLKNLEAARPSAIIDIIHSGEAFEVAEEVAQGMKAQQTCKRCGYISSNDLCKACTLLE 304
Query: 314 GLNRGLPKMGIVRSR 328
GL RGL + + SR
Sbjct: 305 GLERGLGSLAVKDSR 319
>gi|307209204|gb|EFN86311.1| ATP-binding domain-containing protein 3 [Harpegnathos saltator]
Length = 340
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/309 (68%), Positives = 250/309 (80%), Gaps = 1/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CST + A LKRPKT + +C++CF+ FE EIH I+ +LFK G+++AIGASGGKDST
Sbjct: 5 CSTNCGKNAILKRPKTGDTLCKDCFFLAFETEIHDTIINGKLFKPGDKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA++L LN R+ Y LDLFLLSIDEGI+GYRDDSL+TV +N Y +PLKI+SYK+LYG
Sbjct: 65 VLAYILKTLNERYKYKLDLFLLSIDEGITGYRDDSLKTVMQNRDDYSIPLKILSYKELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG KNNCTFCGVFRRQALDRGA+LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDAIVAEIGRKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNVLRGD 184
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT + T I RCKP KY YEKEI+ YAYFK L YFSTECIY+PNAYRG+A
Sbjct: 185 IARLQRCTSVITAGADSIMRCKPLKYAYEKEIVM-YAYFKHLVYFSTECIYAPNAYRGYA 243
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP I+DII SGE ++ + KMPE+ C RCG++SSQ+ CKACVLLEGL
Sbjct: 244 RAFLKDLEKIRPSTIIDIIHSGEQLQVKDNIKMPERRNCTRCGFVSSQEICKACVLLEGL 303
Query: 316 NRGLPKMGI 324
NRGLPK+GI
Sbjct: 304 NRGLPKLGI 312
>gi|388855750|emb|CCF50738.1| uncharacterized protein [Ustilago hordei]
Length = 410
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/360 (60%), Positives = 268/360 (74%), Gaps = 31/360 (8%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN +A L+RPKT +QIC+ECF+ VFE E+H IV + LFK G+R+AIGASGGKD
Sbjct: 4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSSNLFKRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +L
Sbjct: 64 STVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD++ETVL+N+LR
Sbjct: 124 YGWTMDDIVRSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVSETVLMNVLR 183
Query: 194 GDIARLSRCTLITT-----GEDGP-------------------IPRCKPFKYTYEKEIMF 229
GDIARL RCT I T G + P I R KPF Y YEKEI+
Sbjct: 184 GDIARLERCTEIVTKGPSDGLEDPEHEGCGSSGSNNLGVGGSGIRRSKPFMYAYEKEIVM 243
Query: 230 TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST---ST 286
YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP +I+DII+SG+N +IST +
Sbjct: 244 -YAYFKKLDYFSTECIYSPNAYRGYARTFLKDLEAIRPSSIVDIIQSGQNLKISTVVKQS 302
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKN 346
K E C RCGYISS K CKAC+LLEGL +G P++GI + + + KD++Q +K+
Sbjct: 303 KKTELQNCARCGYISSNKTCKACILLEGLEKGTPQLGI---GSEKSRKIKDIRQEMASKD 359
>gi|409075326|gb|EKM75707.1| hypothetical protein AGABI1DRAFT_109220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 359
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 248/314 (78%), Gaps = 3/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC+ C KA L+RPKT +QICRECF+ VFE EIH I +LFK G+R+AIGASGGKD
Sbjct: 4 KLCALCEAAKATLRRPKTGQQICRECFFFVFETEIHHTITEAKLFKPGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLKI+SY +L
Sbjct: 64 STVLAYVMKTLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYGMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDSIVAQVGRKNNCTFCGVFRRQALDRGAATLGVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTAICTEGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F + K + Q TC+RCGY+SS CKAC L
Sbjct: 243 HARAFLKDLEAARPSAIIDIIHSGEAFEVKDEVKASQRVQRTCQRCGYMSSNPLCKACTL 302
Query: 312 LEGLNRGLPKMGIV 325
LEGL RG + G+
Sbjct: 303 LEGLERGSAESGLT 316
>gi|321462932|gb|EFX73952.1| hypothetical protein DAPPUDRAFT_200348 [Daphnia pulex]
Length = 341
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/330 (62%), Positives = 252/330 (76%), Gaps = 1/330 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
CST A LKRPKT + +C+ CF+ FE E+H I ++F+ G+ +AIGASGGKDS
Sbjct: 4 FCSTGCGSTAVLKRPKTDDALCKNCFFWAFETEVHHTITSTKMFQPGQLVAIGASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA+VL LN ++NYGL L LLSIDEGI+GYRDDSL++VKRN+ +Y +PL ++SYKDLY
Sbjct: 64 TVLAYVLKHLNEKYNYGLKLVLLSIDEGITGYRDDSLESVKRNQEEYNIPLTVLSYKDLY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IVK +G KNNCTFCGVFRRQALDRGA LLK D IATGHNADD+AET+L+N+LRG
Sbjct: 124 GWTMDDIVKQVGRKNNCTFCGVFRRQALDRGAVLLKCDIIATGHNADDVAETILMNLLRG 183
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL RCT TG DG +PR KPFKY YEKEI+ YAYFK+LDYF+TEC+Y+P+AYRG
Sbjct: 184 DIARLQRCTFHITGSDGSLPRVKPFKYAYEKEIVL-YAYFKKLDYFATECVYAPDAYRGH 242
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR +KDLE LR +I+DII +GE I K+P+QG C CGY+SS CKACVLLEG
Sbjct: 243 ARALVKDLEALRSTSIIDIIHAGEQLAIKDGVKLPKQGLCSSCGYVSSNIICKACVLLEG 302
Query: 315 LNRGLPKMGIVRSRGQNNERTKDMKQNKGT 344
LNRG PK+ I +S E + QN +
Sbjct: 303 LNRGRPKLAIGKSNKALAELLAERLQNAAS 332
>gi|426197979|gb|EKV47905.1| hypothetical protein AGABI2DRAFT_184327 [Agaricus bisporus var.
bisporus H97]
Length = 359
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 248/314 (78%), Gaps = 3/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC+ C KA L+RPKT +QICRECF+ VFE EIH I +LFK G+R+AIGASGGKD
Sbjct: 4 KLCALCEAAKATLRRPKTGQQICRECFFFVFETEIHHTITEAKLFKPGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLKI+SY +L
Sbjct: 64 STVLAYVMKTLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYGMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDSIVAQVGRKNNCTFCGVFRRQALDRGAATLGVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTAICTEGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F + K + Q TC+RCGY+SS CKAC L
Sbjct: 243 HARVFLKDLEAARPSAIIDIIHSGEAFEVKDEVKASQRVQRTCQRCGYMSSNPLCKACTL 302
Query: 312 LEGLNRGLPKMGIV 325
LEGL RG + G+
Sbjct: 303 LEGLERGSAESGLT 316
>gi|343425266|emb|CBQ68802.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 392
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 256/336 (76%), Gaps = 26/336 (7%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN +A L+RPKT +QIC+ECF+ VFE E+H IV N LFK G+R+AIGASGGKD
Sbjct: 4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNHLFKRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +L
Sbjct: 64 STVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD+IVK +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 124 YGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAETVLMNVLR 183
Query: 194 GDIARLSRCT-LITTGEDGP---------------------IPRCKPFKYTYEKEIMFTY 231
GDIARL RCT ++T G D I R KPF Y YEKEI+ Y
Sbjct: 184 GDIARLERCTEIVTKGPDADDTDQHGCGSSSGANAGVGGSGIRRSKPFMYAYEKEIVM-Y 242
Query: 232 AYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-- 289
AYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP +I+DII+SG+N +IS + K
Sbjct: 243 AYFKKLDYFSTECIYSPNAYRGYARTFLKDLEAIRPSSIVDIIQSGQNLKISHAVKQARK 302
Query: 290 -EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
E C RCGYISS + CKAC+LLEGL RG P++GI
Sbjct: 303 TELQNCRRCGYISSNEVCKACILLEGLERGTPQLGI 338
>gi|353243359|emb|CCA74910.1| related to NCS6-Protein with role in invasive growth
[Piriformospora indica DSM 11827]
Length = 358
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/311 (67%), Positives = 248/311 (79%), Gaps = 1/311 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C +A ++RPKT + +C+ECF+ VFE E+H I +LFK G+R+AIGASGGKD
Sbjct: 4 RTCQFCQNARAIIRRPKTGDHVCKECFFNVFETEVHNTIQEAKLFKPGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA V+ LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLKI+SYK+L
Sbjct: 64 STVLAHVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQQQYDLPLKILSYKEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDAIVEQVGRKNNCTFCGVFRRQALDRGAASLNVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCTLI T + I R KP KY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTLICTQGEDTIRRSKPLKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+K LE RP I+DII+SGE F ++ + EQ C RCGYI+S + CKAC LLE
Sbjct: 243 HARSFLKSLEVARPSVIIDIIRSGEAFEVAQEVVIKEQRKCSRCGYIASNELCKACTLLE 302
Query: 314 GLNRGLPKMGI 324
GL RG+PK+GI
Sbjct: 303 GLERGIPKLGI 313
>gi|409050118|gb|EKM59595.1| hypothetical protein PHACADRAFT_137567 [Phanerochaete carnosa
HHB-10118-sp]
Length = 353
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/314 (67%), Positives = 249/314 (79%), Gaps = 3/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C+ C+Q +A LKRPKT +QIC++CF+ VFE E+H I +LFK G+R+AIGASGGKD
Sbjct: 4 RNCALCDQARAILKRPKTGQQICKDCFFYVFETEVHNTITEAKLFKLGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +L
Sbjct: 64 STVLAYVMKTLNDRYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDIPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV +G KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDAIVSQVGKKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T D I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTSICTQGDDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F + K + Q C+RCGY+SS CKAC L
Sbjct: 243 HARAFLKDLEAARPSAIIDIIHSGEAFEVKEEVKATQKLQQICKRCGYMSSNDLCKACSL 302
Query: 312 LEGLNRGLPKMGIV 325
LEGL RG+P+ +
Sbjct: 303 LEGLERGMPRAAVT 316
>gi|389746964|gb|EIM88143.1| hypothetical protein STEHIDRAFT_120339 [Stereum hirsutum FP-91666
SS1]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/314 (67%), Positives = 248/314 (78%), Gaps = 3/314 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C+ CN +A +KRPKT +QIC++CF+ VFE E+H I LFK G+++AIGASGGKD
Sbjct: 4 RNCALCNNARAIVKRPKTGQQICKDCFFYVFETEVHNTITEASLFKRGDKVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +L
Sbjct: 64 STVLAYVMKTLNDRYDYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG KNNCTFCGVFRRQALDRGAS L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDRIVSTIGKKNNCTFCGVFRRQALDRGASSLNVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCTLI T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTLICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F + K + Q TC+RCGY+SS CKAC L
Sbjct: 243 HARAFLKDLEAARPSAIIDIIHSGEAFEVKDEVKAAQKAQQTCKRCGYMSSNDLCKACTL 302
Query: 312 LEGLNRGLPKMGIV 325
LEGL RGL + +
Sbjct: 303 LEGLERGLANVAVT 316
>gi|321259441|ref|XP_003194441.1| VEG136 protein [Cryptococcus gattii WM276]
gi|317460912|gb|ADV22654.1| VEG136 protein [Cryptococcus gattii WM276]
Length = 369
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/316 (67%), Positives = 258/316 (81%), Gaps = 4/316 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGKDS
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDS 65
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+++YGLPLKI+SY +LY
Sbjct: 66 TVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQLEYGLPLKILSYSELY 125
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RG
Sbjct: 126 GWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRG 185
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL+RCT +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 186 DIARLARCTAVTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPDAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVLL 312
AR F+KDLE +RP AI+DII SGE+F + S + M TC RCGYISS CKAC LL
Sbjct: 245 ARVFLKDLESVRPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALL 304
Query: 313 EGLNRGLPKMGIVRSR 328
EGL GL + + +++
Sbjct: 305 EGLESGLSRSALRQTQ 320
>gi|302694583|ref|XP_003036970.1| hypothetical protein SCHCODRAFT_48271 [Schizophyllum commune H4-8]
gi|300110667|gb|EFJ02068.1| hypothetical protein SCHCODRAFT_48271 [Schizophyllum commune H4-8]
Length = 354
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 250/318 (78%), Gaps = 4/318 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C KA L+RPKT +QIC++CF+ VFE E+H IV +LF+ G+R+AIGASGGKDST
Sbjct: 6 CALCKAAKAILRRPKTGQQICKDCFFYVFETEVHNTIVDARLFQRGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN R++YGLDLFLLSIDEGI GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAYVLKTLNERYDYGLDLFLLSIDEGIMGYRDDSLETVKRNQQQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV +G KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDRIVSQVGKKNNCTFCGVFRRQALDRGAAMLHVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTSICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLE 313
R F+KDLE RP AI+DII SGE F I K + Q TC+RCGY+SS CKAC LLE
Sbjct: 245 RVFLKDLEAARPSAIIDIIHSGEAFEIREEVKATQKSQQTCKRCGYMSSNDLCKACTLLE 304
Query: 314 GLNRGLPKMGIV-RSRGQ 330
GL RG+ GI R R Q
Sbjct: 305 GLERGMASSGITDRGRKQ 322
>gi|156370799|ref|XP_001628455.1| predicted protein [Nematostella vectensis]
gi|156215432|gb|EDO36392.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/311 (67%), Positives = 249/311 (80%), Gaps = 6/311 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C KA LKRPKT +C++CFY +FE E+H+ I+ N LF GE +AIGASGGKDS
Sbjct: 4 FCGNCGG-KAVLKRPKTGATLCKDCFYTLFETEVHETIIANNLFTEGEVVAIGASGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA+VL LN R+NYGL L LLS+DEGI+GYRDDSL+ K Y L +++ +++LY
Sbjct: 63 TVLAYVLKTLNERYNYGLKLLLLSVDEGITGYRDDSLELAK----NYQLVNELLYFQELY 118
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD IVK IGLKNNCTFCGVFRRQALDRGA LLKV+KI TGHNADDIAETV++N+LRG
Sbjct: 119 GWSMDAIVKQIGLKNNCTFCGVFRRQALDRGAMLLKVNKIVTGHNADDIAETVIMNVLRG 178
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL RCT ITTG +G IPRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG
Sbjct: 179 DIARLRRCTAITTGTEGAIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGH 237
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR ++KDLE++RP +I+DII SGE + KMP QG C RC YISSQ CKACVLLEG
Sbjct: 238 ARTYLKDLEKIRPSSIIDIIYSGERLSVKKDVKMPVQGKCTRCQYISSQPLCKACVLLEG 297
Query: 315 LNRGLPKMGIV 325
LN+G+P+ G++
Sbjct: 298 LNKGMPRYGLI 308
>gi|170106385|ref|XP_001884404.1| predicted protein [Laccaria bicolor S238N-H82]
gi|226711425|sp|B0DK66.1|CTU1_LACBS RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|164640750|gb|EDR05014.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 354
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 245/312 (78%), Gaps = 3/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + KA +KRPKT EQICRECF+ VFE E+H I LFK G+R+AIGASGGKDST
Sbjct: 6 CAICQKAKAMVKRPKTGEQICRECFFYVFETEVHNTITQANLFKPGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAYVMKMLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV +G KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAIVSQVGRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTSICTQGEDTIRRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLE 313
R F+KDLE RP AI+DII SGE F + K + Q C+RCGY+SS CKAC LLE
Sbjct: 245 RVFLKDLEAARPSAIIDIIHSGEAFEVREEVKATQRVQQVCQRCGYMSSNALCKACTLLE 304
Query: 314 GLNRGLPKMGIV 325
GL RG+ GI
Sbjct: 305 GLERGMANSGIT 316
>gi|395330663|gb|EJF63046.1| hypothetical protein DICSQDRAFT_83913, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 357
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/319 (67%), Positives = 251/319 (78%), Gaps = 4/319 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC+ C+ +A LKRPKT +QIC+ECF+ VFE E+H + +LFK G+R+AIGASGGKD
Sbjct: 4 RLCALCHAVRAILKRPKTGQQICKECFFYVFETEVHNTVTEAKLFKPGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA V+ LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +L
Sbjct: 64 STVLAHVMKTLNERYSYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG KNNCTFCGVFRRQALDRGA++L V+ I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDAIVTQIGKKNNCTFCGVFRRQALDRGAAILNVEHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTSICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F I K + Q TC RCGY+SS + CKAC L
Sbjct: 243 HARAFLKDLEVSRPSAIIDIIHSGEAFEIKEDVKATQKSQQTCRRCGYMSSNELCKACTL 302
Query: 312 LEGLNRGLPKMGIVRSRGQ 330
LEGL RG+ + RG+
Sbjct: 303 LEGLERGMAH-AVATDRGR 320
>gi|24651972|ref|NP_610451.1| CG8078 [Drosophila melanogaster]
gi|122102795|sp|Q7JWW5.1|CTU1_DROME RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|7303947|gb|AAF58991.1| CG8078 [Drosophila melanogaster]
gi|20976850|gb|AAM27500.1| LD03161p [Drosophila melanogaster]
gi|220950426|gb|ACL87756.1| CG8078-PA [synthetic construct]
Length = 343
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/317 (67%), Positives = 255/317 (80%), Gaps = 6/317 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRGQ 330
LNRGLPK+GI +S+G+
Sbjct: 304 LNRGLPKLGIGKKSKGE 320
>gi|195332699|ref|XP_002033031.1| GM20632 [Drosophila sechellia]
gi|226711421|sp|B4HSL7.1|CTU1_DROSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194125001|gb|EDW47044.1| GM20632 [Drosophila sechellia]
Length = 343
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 250/310 (80%), Gaps = 5/310 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SKCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 304 LNRGLPKLGI 313
>gi|392568950|gb|EIW62124.1| cytoplasmic tRNA 2-thiolation protein 1 [Trametes versicolor
FP-101664 SS1]
Length = 357
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 249/318 (78%), Gaps = 4/318 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C+ C+ +A LKRPKT +QIC+ECF+ VFE E+H I QLFK G+R+AIGASGGKD
Sbjct: 4 RTCALCDDARAILKRPKTGQQICKECFFYVFETEVHNTIQEAQLFKRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA V+ LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +L
Sbjct: 64 STVLAHVMKALNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDAIVSQVGKKNNCTFCGVFRRQALDRGAATLNVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTSICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP AI+DII SGE F + K + Q C+RCGY+SS + CKAC L
Sbjct: 243 HARVFLKDLEAARPSAIIDIIHSGEAFEVKDDVKATQKIQQICKRCGYMSSNELCKACTL 302
Query: 312 LEGLNRGLPKMGIV-RSR 328
LEGL RGL I RSR
Sbjct: 303 LEGLERGLANAAITDRSR 320
>gi|164661037|ref|XP_001731641.1| hypothetical protein MGL_0909 [Malassezia globosa CBS 7966]
gi|226711427|sp|A8PVM6.1|CTU1_MALGO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|159105542|gb|EDP44427.1| hypothetical protein MGL_0909 [Malassezia globosa CBS 7966]
Length = 373
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/337 (63%), Positives = 254/337 (75%), Gaps = 29/337 (8%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C +A L+RPKT + +CR CF+ VFE E+HQ IV QLF+ G+R+AIGASGGKD
Sbjct: 3 RECELCGTERAVLRRPKTGDLVCRACFFHVFETEVHQTIVEAQLFRRGDRVAIGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLK++ YK+L
Sbjct: 63 STVLAYVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQEQYGIPLKVLGYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGW+MD+IV IG KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 123 YGWSMDDIVASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAETVLMNVLR 182
Query: 194 GDIARLSRCTLITTGEDGP--------------------------IPRCKPFKYTYEKEI 227
GDIARL RCT I T GP I R KPFKY YEKEI
Sbjct: 183 GDIARLERCTDIIT--KGPDGVDGDEDDDETEGCGAGRSGFGGSGIRRSKPFKYAYEKEI 240
Query: 228 MFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK 287
+ YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP +I+DII SGEN ++ K
Sbjct: 241 VM-YAYFKQLDYFSTECIYSPNAYRGYARAFLKDLESIRPSSIIDIIHSGENLHVAGQVK 299
Query: 288 MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
Q TC RCGYISS + CKACVLLEGLNRG P +G+
Sbjct: 300 RAVQRTCTRCGYISSNELCKACVLLEGLNRGAPALGV 336
>gi|443898440|dbj|GAC75775.1| uncharacterized conserved protein with similarity to predicted
ATPase of the PP-loop superfamily [Pseudozyma antarctica
T-34]
Length = 397
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/361 (60%), Positives = 266/361 (73%), Gaps = 30/361 (8%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN+ +A L+RPKT +QIC+ECF+ VFE E+H IV N LF+ G+R+AIGASGGKD
Sbjct: 4 KLCVICNKERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNNLFQRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +L
Sbjct: 64 STVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD+IVK +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 124 YGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAETVLMNVLR 183
Query: 194 GDIARLSRCT-LITTGEDGP----------------------IPRCKPFKYTYEKEIMFT 230
GDIARL RCT ++T G DG I R KPF Y YEKEI+
Sbjct: 184 GDIARLERCTEIVTKGPDGSEDPEHDGCGASGSNGIGVGGSGIRRSKPFMYAYEKEIVM- 242
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP- 289
YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP I+DII+SG+N +IS+ K
Sbjct: 243 YAYFKKLDYFSTECIYSPNAYRGYARTFLKDLEAIRPSTIVDIIQSGQNLKISSVVKQSR 302
Query: 290 --EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNI 347
E C RCGYISS CKAC+LLEGL +G P++GI + + + KD++ + K
Sbjct: 303 KTELQNCVRCGYISSNTVCKACILLEGLEKGTPQLGI---GSEKSRKIKDIRTDNAAKAQ 359
Query: 348 E 348
E
Sbjct: 360 E 360
>gi|193645837|ref|XP_001944809.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Acyrthosiphon pisum]
Length = 333
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/317 (66%), Positives = 251/317 (79%), Gaps = 1/317 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS + A LKRPKT + +C+ECFY FE EIH I LFK G+ +AI ASGGKDS
Sbjct: 4 LCSAKCGQNAVLKRPKTGDTLCKECFYWAFELEIHSTITNGNLFKKGDVVAIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NY L L LLSIDEGI+GYRDDSL+TV N+ +Y +PLKI+SY+ LY
Sbjct: 64 TVLAQVLKTLNERYNYELKLVLLSIDEGITGYRDDSLKTVLENKDEYQMPLKILSYQQLY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD+IV +G KNNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRG
Sbjct: 124 GWSMDKIVAEVGRKNNCTFCGVFRRQALDRGAMLLNVDCIATGHNADDIAETVLMNILRG 183
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ARL RC I T +G IPRCKP KYTYEKEI+ YAYFK+L+YFSTECI++PNAYRG+
Sbjct: 184 DVARLQRCVNIITITEGTIPRCKPLKYTYEKEIVM-YAYFKKLNYFSTECIFAPNAYRGY 242
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLERL+P +I+DII SGE I + K+P+ G C +CG++SSQ CKAC+LLEG
Sbjct: 243 ARTFLKDLERLKPSSIMDIIHSGETMCIKENVKLPDIGVCTKCGFVSSQDICKACILLEG 302
Query: 315 LNRGLPKMGIVRSRGQN 331
LNRGLPK+GI +S N
Sbjct: 303 LNRGLPKLGIGKSSKAN 319
>gi|58267828|ref|XP_571070.1| mitochondrion protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112329|ref|XP_775140.1| hypothetical protein CNBE4140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817815|sp|P0CS71.1|CTU1_CRYNB RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|338817816|sp|P0CS70.1|CTU1_CRYNJ RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|50257792|gb|EAL20493.1| hypothetical protein CNBE4140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227304|gb|AAW43763.1| mitochondrion protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 363
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/316 (67%), Positives = 257/316 (81%), Gaps = 4/316 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGKDS
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDS 65
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ +YGLPLKI+SY +LY
Sbjct: 66 TVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQAEYGLPLKILSYSELY 125
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RG
Sbjct: 126 GWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRG 185
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL+RCT +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 186 DIARLARCTAVTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPDAYRGH 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVLL 312
AR F+KDLE +RP AI+DII SGE+F + S + M TC RCGYISS CKAC LL
Sbjct: 245 ARVFLKDLEAVRPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALL 304
Query: 313 EGLNRGLPKMGIVRSR 328
EGL GL + + +++
Sbjct: 305 EGLESGLSRSALRQTQ 320
>gi|449550024|gb|EMD40989.1| hypothetical protein CERSUDRAFT_103346 [Ceriporiopsis subvermispora
B]
Length = 358
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 248/312 (79%), Gaps = 3/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN +A LKRPKT + IC++CF+ VFE E+H I+ +LFK G+R+AIGASGGKDST
Sbjct: 6 CAICNSARAILKRPKTGQLICKDCFFYVFETEVHNTILEAELFKPGDRVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+NYGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAHVMKTLNDRYNYGLELFLLSIDEGITGYRDDSLETVKRNQEQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAIVAQIGKKNNCTFCGVFRRQALDRGAAILDVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTSICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLE 313
R F+KDLE RP AI+DII SGE F I K + Q TC+RCGY+SS + CKAC LLE
Sbjct: 245 RAFLKDLEAARPSAIIDIIHSGEAFEIKEVVKATQKLQQTCKRCGYMSSNELCKACTLLE 304
Query: 314 GLNRGLPKMGIV 325
GL RG+ G+
Sbjct: 305 GLERGMANAGVT 316
>gi|1513300|gb|AAB06790.1| ORFveg136; similar to Saccharomyces cerevisiae chromosome VII
reading frame ORF YGL211w encoded by EMBL Accession
Number Z72733, partial [Dictyostelium discoideum]
Length = 357
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/317 (65%), Positives = 250/317 (78%), Gaps = 1/317 (0%)
Query: 8 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIG 67
+ K +LC CN + LKRPKT E IC+ECFY VFE+EIH I+ N LFK G+R+AIG
Sbjct: 2 ATKKKSKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRVAIG 61
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
ASGGKDSTVLA +++ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +P +I
Sbjct: 62 ASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYPIPSQI 121
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
+SYK+LY WTMD+IVK IGLK NCT CGVFRRQALDRGA +LK +KI TGHNADDIAETV
Sbjct: 122 LSYKELYNWTMDDIVKEIGLKGNCTSCGVFRRQALDRGAVMLKANKIVTGHNADDIAETV 181
Query: 188 LLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+++LRGDI RL RC I TG +G +PR KPFKYTY++EI+ YAYFK+LDYFSTECIY+
Sbjct: 182 FMDLLRGDIPRLQRCVNIITGSEGALPRSKPFKYTYQREIVM-YAYFKKLDYFSTECIYA 240
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
PNAYRG AR+F+KDLE +RP I+DII S ENF KMP Q C +CGYI S C
Sbjct: 241 PNAYRGHARDFLKDLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSNDICM 300
Query: 308 ACVLLEGLNRGLPKMGI 324
AC LL+ LN GL K+ +
Sbjct: 301 ACDLLKNLNSGLAKVKL 317
>gi|336373203|gb|EGO01541.1| hypothetical protein SERLA73DRAFT_176877 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386049|gb|EGO27195.1| hypothetical protein SERLADRAFT_460179 [Serpula lacrymans var.
lacrymans S7.9]
Length = 352
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 245/312 (78%), Gaps = 3/312 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C KA LKRPKT +QIC++CF+ VFE E+H I +LFK G+++AIGASGGKDST
Sbjct: 6 CALCKMSKAILKRPKTGQQICKDCFFYVFETEVHHTITTAKLFKQGDKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYG
Sbjct: 66 VLAHVMKTLNDRYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAIVSQIGKKNNCTFCGVFRRQALDRGAAMLDVDHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCT+I T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTMICTQGEDTIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLE 313
R F+KDLE RP AI+DII SGE F + K + Q TC RCGY+SS + CKAC LLE
Sbjct: 245 RAFLKDLEAARPSAIIDIIHSGEAFEVREEVKAAQKTQQTCIRCGYMSSNELCKACTLLE 304
Query: 314 GLNRGLPKMGIV 325
GL RG+ I
Sbjct: 305 GLERGMANSAIT 316
>gi|195028039|ref|XP_001986888.1| GH20281 [Drosophila grimshawi]
gi|226711418|sp|B4J5B3.1|CTU1_DROGR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|193902888|gb|EDW01755.1| GH20281 [Drosophila grimshawi]
Length = 343
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/304 (69%), Positives = 249/304 (81%), Gaps = 4/304 (1%)
Query: 23 KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLS 82
KAALKRPKT + +C++CF+ FE EIH IV ++LF+ GE++A+ ASGGKDSTVLA V+
Sbjct: 12 KAALKRPKTGDALCKDCFFAAFEAEIHHTIVSSRLFRRGEKVAVAASGGKDSTVLAHVMK 71
Query: 83 ELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV 142
LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGWTMD IV
Sbjct: 72 LLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIV 131
Query: 143 KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC 202
IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD ARL RC
Sbjct: 132 AQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRRC 191
Query: 203 TLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIK 260
T I T GED IPR KP KY+YEKEI+ YA++KRL YFSTEC+++PNAYRG AR F+K
Sbjct: 192 TNIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKRLVYFSTECVFAPNAYRGHARAFLK 249
Query: 261 DLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLP 320
DLE++RP I+DII SGE R + K P +G CERCG++SSQ+ CKACVLLEGLNRGLP
Sbjct: 250 DLEKVRPSVIMDIIYSGEQLRFKDTAKKPVRGICERCGFVSSQQPCKACVLLEGLNRGLP 309
Query: 321 KMGI 324
K+GI
Sbjct: 310 KLGI 313
>gi|194863280|ref|XP_001970365.1| GG10584 [Drosophila erecta]
gi|226711417|sp|B3N7L9.1|CTU1_DROER RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190662232|gb|EDV59424.1| GG10584 [Drosophila erecta]
Length = 343
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/317 (67%), Positives = 254/317 (80%), Gaps = 6/317 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+G C RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGICTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRGQ 330
LNRGLPK+GI +S+G+
Sbjct: 304 LNRGLPKLGIGKKSKGE 320
>gi|167519993|ref|XP_001744336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777422|gb|EDQ91039.1| predicted protein [Monosiga brevicollis MX1]
Length = 361
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/312 (67%), Positives = 248/312 (79%), Gaps = 7/312 (2%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
R C C + AALKRPKT E +CRECFY FEEE+H+ IV N LF+ G+ +AIGASGGK
Sbjct: 3 ARPCQRCAEHSAALKRPKTGEAVCRECFYLAFEEEVHETIVRNALFERGDVVAIGASGGK 62
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+VL LN RH+YGL L LLS+DEGISGYRDDSL+TVKRN+ QY LPL IVSYK+
Sbjct: 63 DSTVLAYVLKTLNERHDYGLQLVLLSVDEGISGYRDDSLETVKRNQQQYALPLTIVSYKE 122
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LYGWTMDEIV +G K+NCTFCGVFRRQALDRGA LLKV+K+ TGHNADD+AETVL+NIL
Sbjct: 123 LYGWTMDEIVAAVGRKSNCTFCGVFRRQALDRGAHLLKVNKVVTGHNADDVAETVLMNIL 182
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
RGDIARL RCT I TG+DG +PR KPFKYTYEKEI+ YAYFK+LDYFSTECIY+PNAYR
Sbjct: 183 RGDIARLQRCTEIVTGDDGDLPRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYAPNAYR 241
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G AR +KDLE++RP AI+DII+SGE + + +G YISSQ+ C+
Sbjct: 242 GHARVLLKDLEKIRPSAIIDIIRSGEAMAVKDTVSTAIKGR-----YISSQQRF-LCIAS 295
Query: 313 EGLNRGLPKMGI 324
GLN+G+PK+ I
Sbjct: 296 LGLNKGMPKLAI 307
>gi|388580677|gb|EIM20990.1| cytoplasmic tRNA 2-thiolation protein 1 [Wallemia sebi CBS 633.66]
Length = 335
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 257/329 (78%), Gaps = 4/329 (1%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
+KRPKT +Q+C++CF+ FEEEIH+ I FK GER+AIGASGGKDSTVLA V+ LN
Sbjct: 2 IKRPKTGQQVCKDCFFFAFEEEIHKTITDAGTFKRGERVAIGASGGKDSTVLAHVMKTLN 61
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
RH+YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLKI+SY +LYGWTMD IV+ +
Sbjct: 62 DRHDYGLNLFLLSIDEGITGYRDDSLETVKRNKEQYQLPLKILSYNELYGWTMDRIVEAV 121
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
G KNNCTFCGVFRRQALDRGAS L + I TGHNADD+AETVL+NILRGD++RL RC I
Sbjct: 122 GKKNNCTFCGVFRRQALDRGASSLNISHIVTGHNADDVAETVLMNILRGDVSRLGRCVEI 181
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERL 265
TT + I R KPFKYTYEKEI+ YAYFK+LDYFSTECIYSP AYRGFAR +IKDLE L
Sbjct: 182 TTRGEDTIKRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPEAYRGFARTYIKDLEAL 240
Query: 266 RPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
RP I+DII S EN RIS + +P+Q C+RCGYISS + CKACVLL+GL +G KM
Sbjct: 241 RPSTIIDIIHSAENIRISDVVQDALPKQQKCKRCGYISSNELCKACVLLQGLEKGTAKMA 300
Query: 324 I-VRSRGQNNERTKDMKQNKGTKNIESKQ 351
I +++ + E T D++ K E +Q
Sbjct: 301 IGNKAKHISQEVTGDIRTIPMFKMPEQQQ 329
>gi|289742235|gb|ADD19865.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 348
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/315 (66%), Positives = 253/315 (80%), Gaps = 7/315 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++ + AALKRPKT + +C+ECF+ FE EIH I+ N+LF++G+++AI ASGGKDST
Sbjct: 5 CTSGCGKNAALKRPKTGDALCKECFFTAFELEIHHTIITNKLFESGQKVAIAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA +L LN+R+NYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYG
Sbjct: 65 VLAHILRLLNQRYNYGLELVLLSIDEGITGYRDDSLETVKKNRDDYQMPLKILSYEELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG NNCTFCGVFRRQALDRGA LLKVD IATGHNADDIAETVL+NILRGD
Sbjct: 125 WTMDRIVAQIGRTNNCTFCGVFRRQALDRGAKLLKVDSIATGHNADDIAETVLMNILRGD 184
Query: 196 IARLSRCTLITTGE------DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
ARL RCT I TG + IPR KP KY YEKEI+ YA++K+L YFSTEC+++PN
Sbjct: 185 TARLRRCTDIKTGSNDDSSNENSIPRVKPLKYAYEKEIVM-YAHYKKLIYFSTECVFAPN 243
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
AYRG AR F+KDLE++RP I+DII SGE R + K P +GTCERCG++SSQ+ CKAC
Sbjct: 244 AYRGHARTFLKDLEKIRPSVIMDIIYSGEQLRFKDTVKKPIRGTCERCGFVSSQQPCKAC 303
Query: 310 VLLEGLNRGLPKMGI 324
LLEGLNRGLPK+GI
Sbjct: 304 KLLEGLNRGLPKLGI 318
>gi|195474928|ref|XP_002089738.1| GE22576 [Drosophila yakuba]
gi|226711424|sp|B4P3W7.1|CTU1_DROYA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194175839|gb|EDW89450.1| GE22576 [Drosophila yakuba]
Length = 343
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/317 (67%), Positives = 254/317 (80%), Gaps = 6/317 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R A LKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AVLKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRLGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCIRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI-VRSRGQ 330
LNRGLPK+GI +S+G+
Sbjct: 304 LNRGLPKLGIGKKSKGE 320
>gi|239789230|dbj|BAH71252.1| ACYPI006714 [Acyrthosiphon pisum]
Length = 333
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/315 (66%), Positives = 250/315 (79%), Gaps = 2/315 (0%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
+ C Q A LKRPKT + +C+ECFY FE EIH I LFK G+ +AI ASGGKDSTV
Sbjct: 7 AKCGQN-AVLKRPKTGDTLCKECFYWAFELEIHSTITNGNLFKKGDVVAIAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN R+NY L L LLSIDEGI+GYRDDSL+TV N+ +Y +PLKI+SY+ LYGW
Sbjct: 66 LAQVLKTLNERYNYELKLVLLSIDEGITGYRDDSLKTVLENKDEYQMPLKILSYQQLYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
+MD+IV +G KNNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD+
Sbjct: 126 SMDKIVAEVGRKNNCTFCGVFRRQALDRGAMLLNVDCIATGHNADDIAETVLMNILRGDV 185
Query: 197 ARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAR 256
ARL RC I T +G IPRCKP KYTYEKEI+ YAYFK+L+YFSTECI++PNAYRG+AR
Sbjct: 186 ARLQRCVNIITITEGTIPRCKPLKYTYEKEIVM-YAYFKKLNYFSTECIFAPNAYRGYAR 244
Query: 257 EFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
F+KDLERL+P +I+DII SGE I + K+P+ G C +CG++SSQ CKAC+LLEGLN
Sbjct: 245 TFLKDLERLKPSSIMDIIHSGETMCIKENVKLPDIGVCTKCGFVSSQDICKACILLEGLN 304
Query: 317 RGLPKMGIVRSRGQN 331
RGLPK+GI +S N
Sbjct: 305 RGLPKLGIGKSSKAN 319
>gi|357604009|gb|EHJ64005.1| hypothetical protein KGM_07794 [Danaus plexippus]
Length = 457
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/313 (66%), Positives = 248/313 (79%), Gaps = 1/313 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC + A LKRPKT + +C+ECFYE FE EIH I +LF G+ +AI ASGGKDS
Sbjct: 4 LCKAGCGKNAMLKRPKTGDTLCKECFYEAFETEIHFTITKAELFNRGDSVAIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN+R++YGL+L LLSIDEGI+GYRDDSL+TVK+N Y + LKI+SYKDLY
Sbjct: 64 TVLAHVLKTLNQRYDYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMNLKILSYKDLY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMDEIV IG KNNCTFCGVFRRQALDRGA++L V IATGHNADDIAETVL+N+LRG
Sbjct: 124 GWTMDEIVAQIGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDIAETVLMNVLRG 183
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL RCT I+TG +G IPR KP KYTYEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 184 DIARLKRCTAISTGSEGTIPRVKPLKYTYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 242
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR +KDLE++RP I+DII SGE + +P Q C RC ++SSQ+ CKACVLLEG
Sbjct: 243 ARALLKDLEKIRPTCIMDIIYSGETMAVKEEVSLPTQRICTRCKFVSSQEVCKACVLLEG 302
Query: 315 LNRGLPKMGIVRS 327
LN+GLPK+GI +S
Sbjct: 303 LNKGLPKLGIGKS 315
>gi|91093715|ref|XP_967465.1| PREDICTED: similar to CG8078 CG8078-PA [Tribolium castaneum]
gi|270012990|gb|EFA09438.1| hypothetical protein TcasGA2_TC010650 [Tribolium castaneum]
Length = 338
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/337 (62%), Positives = 261/337 (77%), Gaps = 5/337 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS + A LKRPKT + +C+ECF+E FE EIH I +LFK G ++AI ASGGKDST
Sbjct: 4 CSAQCGKNAILKRPKTGDTLCKECFFEAFENEIHFTITRAKLFKPGSKVAIAASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN +++Y LDL LLSIDEGI+GYRDDSL TVK+N YG+PLKI+SYKDLYG
Sbjct: 64 VLAYVMKLLNEKYDYKLDLVLLSIDEGITGYRDDSLDTVKQNRDDYGMPLKIMSYKDLYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA+LL VD +ATGHNADDIAETVL+NILRGD
Sbjct: 124 WTMDEIVAEIGRKNNCTFCGVFRRQALDRGAALLNVDYLATGHNADDIAETVLMNILRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ARLSRCT I T IPR KP KYTYEKEI+ YAYF++L YFSTEC+++PNAYRG A
Sbjct: 184 LARLSRCTSIITDSGDGIPRVKPLKYTYEKEIVM-YAYFRKLVYFSTECVFAPNAYRGHA 242
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R +KDLE++ P I++II+SGE+ +I+ + MP C RCGY+SSQ CKACVLLEGL
Sbjct: 243 RVLLKDLEKIDPAVIMNIIQSGESLKINENANMPTLQKCTRCGYVSSQDVCKACVLLEGL 302
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQC 352
N+GLPK+GI G++++ + +++N +S C
Sbjct: 303 NKGLPKLGI----GKSSKVKRHLQENSPCCKTQSCLC 335
>gi|195455591|ref|XP_002074786.1| GK22963 [Drosophila willistoni]
gi|226711423|sp|B4NN33.1|CTU1_DROWI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194170871|gb|EDW85772.1| GK22963 [Drosophila willistoni]
Length = 343
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 249/310 (80%), Gaps = 5/310 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R A L+RPKT + +C+ECF+ FE EIH I NQLF+ G++IA+ ASGGKDSTV
Sbjct: 7 SQCGNR-AVLRRPKTGDALCKECFFAAFEAEIHHTISSNQLFQPGQKIAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN +HNYGLDL LLSIDEGISGYRDDSL+TVK+N Y + LKI+SY++LYGW
Sbjct: 66 LAHVLKLLNEKHNYGLDLVLLSIDEGISGYRDDSLETVKQNRDDYQMSLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL+VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLQVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEK+I+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTDIRTGGGEDS-IPRVKPLKYSYEKDIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K P +GTC RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGTCSRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 304 LNRGLPKLGI 313
>gi|169869354|ref|XP_001841243.1| mitochondrial protein [Coprinopsis cinerea okayama7#130]
gi|116497643|gb|EAU80538.1| mitochondrial protein [Coprinopsis cinerea okayama7#130]
Length = 344
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/307 (68%), Positives = 245/307 (79%), Gaps = 4/307 (1%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
+KRPKT +QICR+CF+ VFE E+HQ I +LFK G+R+AIGASGGKDSTVLA+V+ LN
Sbjct: 2 VKRPKTGQQICRDCFFYVFETEVHQTITEAKLFKPGDRVAIGASGGKDSTVLAYVMKTLN 61
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYGWTMD IV +
Sbjct: 62 ERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQV 121
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
G KNNCTFCGVFRRQALDRGA++L VD I TGHNADDIAETVL+NI+RGDIARL RCT I
Sbjct: 122 GRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTSI 181
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERL 265
T + I R KPFKY YEKEI+ YAYFK+LDYFSTECIYSP+AYRG AR F+KDLE
Sbjct: 182 CTEGEDTIRRSKPFKYAYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAA 240
Query: 266 RPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
RP AI+DII SGE F + K + Q TC+RCGY+SS CKAC LLEGL RG+ G
Sbjct: 241 RPSAIIDIIHSGEAFEVKEEIKATQKVQQTCQRCGYMSSNALCKACTLLEGLERGMANAG 300
Query: 324 IVRSRGQ 330
I RGQ
Sbjct: 301 IT-DRGQ 306
>gi|195120392|ref|XP_002004711.1| GI19452 [Drosophila mojavensis]
gi|226711419|sp|B4KLL0.1|CTU1_DROMO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|193909779|gb|EDW08646.1| GI19452 [Drosophila mojavensis]
Length = 343
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/310 (68%), Positives = 250/310 (80%), Gaps = 5/310 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
+ C R A+LKRPKT + +C++CF+ FE EIH I ++LF+ GE++A+ ASGGKDSTV
Sbjct: 7 AKCGNR-ASLKRPKTGDALCKDCFFAAFEAEIHHTITTSKLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K P +G CERCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGNCERCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 304 LNRGLPKLGI 313
>gi|194753600|ref|XP_001959100.1| GF12710 [Drosophila ananassae]
gi|226711416|sp|B3MI77.1|CTU1_DROAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190620398|gb|EDV35922.1| GF12710 [Drosophila ananassae]
Length = 343
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 248/310 (80%), Gaps = 5/310 (1%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SRCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 186 ARLRRCTDIKTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K P +G C RCG++SSQ+ CKACVLLEG
Sbjct: 244 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICTRCGFVSSQQPCKACVLLEG 303
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 304 LNRGLPKLGI 313
>gi|340500262|gb|EGR27156.1| hypothetical protein IMG5_200960 [Ichthyophthirius multifiliis]
Length = 318
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/314 (65%), Positives = 253/314 (80%), Gaps = 4/314 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+ C TCN+++A + RPKT + IC+ECF++ FEEEIH I+ N LF+ G+RIA+GASGGKD
Sbjct: 3 KFCQTCNEKRAFIVRPKTGKLICQECFFQAFEEEIHYTIISNNLFQKGQRIAMGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL V++ LN+++NYGLDL LLSIDEGI+GYRDDSL+TVK N+ YGLPLKI+SYK+L
Sbjct: 63 STVLIHVMNLLNKKYNYGLDLQLLSIDEGITGYRDDSLETVKDNQHTYGLPLKILSYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIVK IGL NNCTFCGVFRRQ+LDRGA LLK DKI TGHNADDIAET+L+N+ R
Sbjct: 123 YGWTMDEIVKQIGLNNNCTFCGVFRRQSLDRGAQLLKCDKILTGHNADDIAETILMNMAR 182
Query: 194 GDIARLSRCTLITTGE---DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
GD RL RC I+TG+ D IPR KPFKYTYEKEI+ YAY K+L YFSTECIYSPNA
Sbjct: 183 GDFFRLGRCVQISTGQEVDDDHIPRLKPFKYTYEKEIVL-YAYHKKLVYFSTECIYSPNA 241
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
YRG RE IK+LE++RP +I+DII S E I+ + KMP++ C +CG++SS CKAC+
Sbjct: 242 YRGHVRELIKNLEKVRPSSIIDIIHSAEQITININAKMPKKMKCIQCGFVSSNDICKACI 301
Query: 311 LLEGLNRGLPKMGI 324
LLE LN+G K+ I
Sbjct: 302 LLERLNKGKAKIEI 315
>gi|390601396|gb|EIN10790.1| hypothetical protein PUNSTDRAFT_64973 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 353
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 247/328 (75%), Gaps = 7/328 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C +A LKRPKT +QIC+ECF+ VFE E+H I QLFK G+R+AIGASGGKD
Sbjct: 4 RLCVLCQTSRAMLKRPKTGQQICKECFFYVFETEVHHTITDAQLFKPGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R+ YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ Y +PL+I+SY DL
Sbjct: 64 STVLAYVMKTLNHRYQYGLDLYLLSIDEGITGYRDDSLETVKQNQKDYDIPLQILSYDDL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD IV IG KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+R
Sbjct: 124 YGWTMDRIVAQIGKKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDIAETVLMNIMR 183
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCTLI T + I R KPFKYTYEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 184 GDIARLGRCTLICTEGEDTIKRSKPFKYTYEKEIVM-YAYFKKLHYFSTECIYSPDAYRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR F+KDLE RP I+DII SGE F + + K + Q C RCGYISS CKAC L
Sbjct: 243 HARAFLKDLEAARPSVIIDIIHSGEAFELRSEVKATQKSQQNCARCGYISSNPLCKACTL 302
Query: 312 LEGLNRGLPKMGIVRSR----GQNNERT 335
LE L G I + GQ++ RT
Sbjct: 303 LESLESGARASSIADASSNPDGQSSMRT 330
>gi|198458643|ref|XP_001361116.2| GA20807 [Drosophila pseudoobscura pseudoobscura]
gi|226711465|sp|Q28ZC1.2|CTU1_DROPS RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|198136413|gb|EAL25692.2| GA20807 [Drosophila pseudoobscura pseudoobscura]
Length = 343
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/305 (68%), Positives = 248/305 (81%), Gaps = 4/305 (1%)
Query: 22 RKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL 81
+ AALKRPKT + +C+ECF+ FE EIH I ++LF+ GE++A+ ASGGKDSTVLA V+
Sbjct: 11 KAAALKRPKTGDALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDSTVLAHVM 70
Query: 82 SELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEI 141
LN RH+YGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGWTMD I
Sbjct: 71 KLLNERHDYGLELVLLSIDEGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRI 130
Query: 142 VKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR 201
V IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD ARL R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGAKLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 202 CTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFI 259
CT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG AR F+
Sbjct: 191 CTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGHARAFL 248
Query: 260 KDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
KDLE++RP I+DII SGE R + K P +GTC RCG+ISSQ+ CKACVLLEGLNRGL
Sbjct: 249 KDLEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGL 308
Query: 320 PKMGI 324
PK+GI
Sbjct: 309 PKLGI 313
>gi|195154724|ref|XP_002018269.1| GL16852 [Drosophila persimilis]
gi|226711420|sp|B4GHY8.1|CTU1_DROPE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194114065|gb|EDW36108.1| GL16852 [Drosophila persimilis]
Length = 343
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/305 (68%), Positives = 248/305 (81%), Gaps = 4/305 (1%)
Query: 22 RKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL 81
+ AALKRPKT + +C+ECF+ FE EIH I ++LF+ GE++A+ ASGGKDSTVLA V+
Sbjct: 11 KAAALKRPKTGDALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDSTVLAHVM 70
Query: 82 SELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEI 141
LN RH+YGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGWTMD I
Sbjct: 71 KLLNERHDYGLELVLLSIDEGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRI 130
Query: 142 VKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR 201
V IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N+LRGD ARL R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGARLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 202 CTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFI 259
CT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG AR F+
Sbjct: 191 CTDIRTGGGEDS-IPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGHARAFL 248
Query: 260 KDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
KDLE++RP I+DII SGE R + K P +GTC RCG+ISSQ+ CKACVLLEGLNRGL
Sbjct: 249 KDLEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGL 308
Query: 320 PKMGI 324
PK+GI
Sbjct: 309 PKLGI 313
>gi|195379938|ref|XP_002048729.1| GJ21203 [Drosophila virilis]
gi|226711422|sp|B4LM02.1|CTU1_DROVI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194143526|gb|EDW59922.1| GJ21203 [Drosophila virilis]
Length = 343
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 247/309 (79%), Gaps = 3/309 (0%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
+ C R A LKRPKT + +C+ CF+ FE EIH I+ ++LF+ GE++A+ ASGGKDSTV
Sbjct: 7 AKCGNR-ATLKRPKTGDALCKACFFAAFEAEIHHTIISSKLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD IV IG NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+NILRGD
Sbjct: 126 TMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDT 185
Query: 197 ARLSRCTLITT-GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
ARL RCT I T G + IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG A
Sbjct: 186 ARLRRCTDIRTGGSEDSIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+KDLE++RP I+DII SGE R + K P +G CERC ++SSQ+ CKACVLLEGL
Sbjct: 245 RAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICERCSFVSSQQPCKACVLLEGL 304
Query: 316 NRGLPKMGI 324
NRGLPK+GI
Sbjct: 305 NRGLPKLGI 313
>gi|413939019|gb|AFW73570.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 252
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/240 (86%), Positives = 221/240 (92%), Gaps = 1/240 (0%)
Query: 4 AESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
A +AG RLC C +RKAALKRPKTLEQICRECFY +FE+EIHQ IV N LFKAGER
Sbjct: 9 ARLPPPRAGSRLCVRCGERKAALKRPKTLEQICRECFYIIFEDEIHQTIVQNSLFKAGER 68
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AIGASGGKDSTVLA+VLSELNR+HNYGLDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGL
Sbjct: 69 VAIGASGGKDSTVLAYVLSELNRQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGL 128
Query: 124 PLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
PLKIVSYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LLK DKI TGHNADDI
Sbjct: 129 PLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDI 188
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
AETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+ YAYFK+LDYFSTE
Sbjct: 189 AETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTE 247
>gi|19112856|ref|NP_596064.1| cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces pombe
972h-]
gi|74582842|sp|O94282.1|CTU1_SCHPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|3850068|emb|CAA21879.1| cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces pombe]
Length = 335
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/319 (64%), Positives = 255/319 (79%), Gaps = 5/319 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN+R+ AL RPKT ++IC+ECFY VFE EIH VI+ N+LF GER+ IGASGGKD
Sbjct: 4 KLCQLCNERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL+L+L+S+DEGI GYRDDSL TVKRN+ QYGLP+KIVSY DL
Sbjct: 64 STVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADL 123
Query: 134 Y-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
Y GWTMD +V IG KNNCT+CGVFRRQALDR A L + + TGHNADDIAET+L+N+L
Sbjct: 124 YDGWTMDNVVARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLL 183
Query: 193 RGDIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL R T ITT D P R KPFKY+YEKEI+ YA++K+LDYFSTEC YSP A+
Sbjct: 184 RGDVARLPRSTEITTQSDSSPTKRSKPFKYSYEKEIVL-YAHYKKLDYFSTECTYSPEAF 242
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCKAC 309
RG AR IK LE +RP +ILDII SGE+ ++++S ++P+Q TCERCG+ISS + CKAC
Sbjct: 243 RGTARAMIKQLENIRPSSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
+LLEGLN+G+ +G+ R
Sbjct: 303 MLLEGLNKGITGLGLGSDR 321
>gi|324517150|gb|ADY46738.1| Cytoplasmic tRNA 2-thiolation protein 1 [Ascaris suum]
Length = 348
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/315 (64%), Positives = 250/315 (79%), Gaps = 2/315 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN AA+K + +CRECF E+FE +H+ IV ++FK GE++AIGASGGKDST
Sbjct: 4 CSKCNN-IAAVKYSRNGNPVCRECFIELFELNVHETIVKCEIFKRGEKVAIGASGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA++L+ LN+R++YG++L LLSIDEGI GYRDDSL+ V+RN +QYGLPL +SYKDLYG
Sbjct: 63 VLAYLLNTLNKRYDYGVELLLLSIDEGIQGYRDDSLKAVERNRLQYGLPLTTLSYKDLYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA +L +K+ TGHNADD+AETVL+N+LRGD
Sbjct: 123 WTMDEIVAKIGTKNNCTFCGVFRRQALDRGALMLGANKLVTGHNADDMAETVLMNLLRGD 182
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RC I TG D +PR KP KYT EK+I+ YA+FK+LDYFSTECIY+PNAYRG+A
Sbjct: 183 IARLQRCATIVTGSDDCLPRAKPLKYTLEKDIVM-YAHFKKLDYFSTECIYAPNAYRGYA 241
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R F+K+LER+RPRAILD+I+SGE+ I +P CERCGYISSQ CKAC+LL+GL
Sbjct: 242 RNFVKELERIRPRAILDLIRSGEDLAIRGEIALPTLTKCERCGYISSQMLCKACLLLQGL 301
Query: 316 NRGLPKMGIVRSRGQ 330
N +G+ + + Q
Sbjct: 302 NTNHLTLGVKKHKSQ 316
>gi|157128941|ref|XP_001661559.1| cancer-associatedprotein protein [Aedes aegypti]
gi|122116943|sp|Q16QI1.1|CTU1_AEDAE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|108872434|gb|EAT36659.1| AAEL011283-PA [Aedes aegypti]
Length = 341
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/319 (65%), Positives = 248/319 (77%), Gaps = 3/319 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+T RKA LKRPKT + +CRECF+ FE EIH I N+LF+ G+ +AI ASGGKDS
Sbjct: 4 LCTTGCSRKAFLKRPKTGDTLCRECFFLAFETEIHNTIEQNKLFRRGDVVAIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL L LLSIDEGI+GYRDDSL+TVKRN YG+ LKI+SY +LY
Sbjct: 64 TVLAHVLKVLNERYDYGLKLVLLSIDEGITGYRDDSLETVKRNRDDYGMELKILSYDELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV IG NNCTFCGVFRRQALDRGA L++VD +ATGHNADDIAETVL+NILRG
Sbjct: 124 GWTMDKIVSKIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVLMNILRG 183
Query: 195 DIARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
D ARL RC I TG + IPR KP KY YEKEI+ YA+FK+L YFSTEC+++PNAYR
Sbjct: 184 DTARLRRCCDIKTGGKDADSIPRVKPLKYAYEKEIVM-YAHFKKLVYFSTECVFAPNAYR 242
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G AR F+KDLER+RP I+DII SGE + K P +G C RCG++SSQ+ CKACVLL
Sbjct: 243 GHARAFLKDLERIRPSVIMDIIHSGEQLSFKDTVKKPLRGKCNRCGFVSSQQPCKACVLL 302
Query: 313 EGLNRGLPKMGIVRSRGQN 331
EGLNRGLPK+G+ + N
Sbjct: 303 EGLNRGLPKLGVGKKSKAN 321
>gi|119113899|ref|XP_314122.3| AGAP005220-PA [Anopheles gambiae str. PEST]
gi|226711467|sp|Q7Q9I4.3|CTU1_ANOGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|116128341|gb|EAA09344.3| AGAP005220-PA [Anopheles gambiae str. PEST]
Length = 342
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/318 (64%), Positives = 255/318 (80%), Gaps = 4/318 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C + R A ++RPKT + +C+ECF+ FE EIH I QLF+ GE++AI ASGGKDST
Sbjct: 5 CGSSCGRNAFMRRPKTGDTLCKECFFLAFETEIHNTIQQEQLFRPGEKVAIAASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V++ LN+R+NYGLDL LLSIDEGI+GYRDDSL+TV +N YG+PL+++SY++LYG
Sbjct: 65 VLAHVMNLLNKRYNYGLDLVLLSIDEGITGYRDDSLKTVAQNRDDYGMPLRVLSYQELYG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD IV IG NNCTFCGVFRRQALDRGA L++VD +ATGHNADDIAETV++NILRGD
Sbjct: 125 WTMDRIVAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGD 184
Query: 196 IARLSRCTLITTG--EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
ARL RC I TG E IPR KP KY+YEKEI+ YA+FK+L YFSTEC+++PNAYRG
Sbjct: 185 TARLRRCCDIKTGSKEADTIPRVKPLKYSYEKEIVM-YAHFKKLVYFSTECVFAPNAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE++RP AI+DII +GE +I + K P +G C RCG++SSQ+ CKACVLLE
Sbjct: 244 HARAFLKDLEKVRPSAIMDIIHAGEQLQIKGTVKKPVRGVCGRCGFVSSQQPCKACVLLE 303
Query: 314 GLNRGLPKMGI-VRSRGQ 330
GLNRGLPK+GI +S+G+
Sbjct: 304 GLNRGLPKLGIGKKSKGE 321
>gi|392593132|gb|EIW82458.1| hypothetical protein CONPUDRAFT_103636 [Coniophora puteana
RWD-64-598 SS2]
Length = 324
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 249/313 (79%), Gaps = 3/313 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + KA +KRPKT + IC+ CF++VFE E+H+ I +LF G+++AIGASGGKDST
Sbjct: 6 CALCQKAKAIIKRPKTGQSICKTCFFDVFETEVHRTITDTRLFNRGDKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+V+ LN R++YGLDL+LLSIDEGI+GYRDDSL+TVKRN++QY +PLKI+SY +LYG
Sbjct: 66 VLAYVMKTLNDRYDYGLDLYLLSIDEGITGYRDDSLETVKRNQLQYDMPLKILSYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD +V IG KNNCTFCGVFRRQALDRGA+ L V+ I TGHNADDIAETVL+NI+RGD
Sbjct: 126 WTMDAVVSKIGKKNNCTFCGVFRRQALDRGAASLGVEHIVTGHNADDIAETVLMNIMRGD 185
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
IARL RCTLI T + I R KPFKYTYEKEI+ YAYFK+LDYFSTECIYSP+AYRG A
Sbjct: 186 IARLGRCTLICTQGEDTIQRSKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPDAYRGHA 244
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMP--EQGTCERCGYISSQKWCKACVLLE 313
R F+KDLE +RP +I+DII SGE + I+ K +Q C RCGY+SS + CKAC LLE
Sbjct: 245 RAFLKDLEAVRPSSIIDIIHSGEAWEITEKVKATQKQQQICRRCGYMSSNELCKACTLLE 304
Query: 314 GLNRGLPKMGIVR 326
L + + G VR
Sbjct: 305 SLEKDTTRGGSVR 317
>gi|402226371|gb|EJU06431.1| hypothetical protein DACRYDRAFT_92437 [Dacryopinax sp. DJM-731 SS1]
Length = 349
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/324 (62%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C+ C+ K L+RPKT +Q+C+ CF+ VFE E+H+ I+G LF+ GE++AIGASGGKD
Sbjct: 5 RTCALCHTSKPILRRPKTGQQLCKPCFFYVFETEVHETIIGTNLFQQGEKVAIGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA VL+ LN R+ YGL L LLSIDEGI+GYRDDSL++VKRN+ +YGLPLKI+ Y +L
Sbjct: 65 STVLAHVLTVLNERYGYGLQLHLLSIDEGITGYRDDSLKSVKRNQQEYGLPLKILGYDEL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD +V+ IG KNNCTFCGVFRRQALDRGA+ L D I TGHNADD AETVL+NILR
Sbjct: 125 YGWTMDRVVEQIGRKNNCTFCGVFRRQALDRGAASLDADHIVTGHNADDTAETVLMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + I R KPFKY YEKEI+ YAYFK+LDYFSTEC+Y+P+AYRG
Sbjct: 185 GDIARLGRCTAICTKGEDSIKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECLYAPDAYRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR F+KDLE RP AI+DII SGE F+++ ++ Q C+RCGY++S + CKAC LLE
Sbjct: 244 HARVFLKDLEAARPSAIIDIIHSGEAFQVAQDVELKPQQFCQRCGYMASNELCKACTLLE 303
Query: 314 GLNRGLPKMGIVRSRGQNNERTKD 337
L +G+ K+ + G N R D
Sbjct: 304 SLEKGMGKLAV----GDRNRRKLD 323
>gi|170046274|ref|XP_001850697.1| ATP-binding domain protein 3 [Culex quinquefasciatus]
gi|167869089|gb|EDS32472.1| ATP-binding domain protein 3 [Culex quinquefasciatus]
Length = 341
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/312 (65%), Positives = 248/312 (79%), Gaps = 3/312 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+T R+A LKRPKT + +C+ECF+ FE EIH I +LF+ G +AI ASGGKDS
Sbjct: 1 MCTTNCGRRAFLKRPKTGDTLCKECFFLAFETEIHNTIEQGKLFERGSLVAIAASGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R++YGL L LLSIDEGISGYRDDSL+TVK+N YG+ LKI+ Y++LY
Sbjct: 61 TVLAHVMKTLNERYDYGLKLVLLSIDEGISGYRDDSLETVKKNRDDYGMELKILDYEELY 120
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IV IG NNCTFCGVFRRQALDRGA ++KV +ATGHNADDIAETVL+NILRG
Sbjct: 121 GWTMDSIVAKIGKSNNCTFCGVFRRQALDRGAHMMKVACVATGHNADDIAETVLMNILRG 180
Query: 195 DIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
D+ARL RC I TG + P IPR KP KY+YEKEI+ YA+FK+L YFSTECIY+PNAYR
Sbjct: 181 DVARLRRCCDIKTGGNSPDSIPRVKPLKYSYEKEIVM-YAHFKKLVYFSTECIYAPNAYR 239
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G AR F+KDLE++RP AI+DII SGE T+ K+P + C++CG++SSQ+ CKACVLL
Sbjct: 240 GHARAFLKDLEKVRPSAIMDIIHSGEQLSFKTAVKLPTKDVCKQCGFVSSQQPCKACVLL 299
Query: 313 EGLNRGLPKMGI 324
EGLNRGLPK+GI
Sbjct: 300 EGLNRGLPKLGI 311
>gi|71020233|ref|XP_760347.1| hypothetical protein UM04200.1 [Ustilago maydis 521]
gi|74700937|sp|Q4P6R3.1|CTU1_USTMA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46099971|gb|EAK85204.1| hypothetical protein UM04200.1 [Ustilago maydis 521]
Length = 396
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/353 (61%), Positives = 261/353 (73%), Gaps = 33/353 (9%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN +A L+RPKT +QIC+ECF+ VFE E+H IV N LFK G+R+AIGASGGKD
Sbjct: 4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNNLFKRGDRVAIGASGGKD 63
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +L
Sbjct: 64 STVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGEL 123
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMD+IVK +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N+LR
Sbjct: 124 YGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAETVLMNVLR 183
Query: 194 GDIARLSRCT-LITTGEDGP-----------------------IPRCKPFKYTYEKEIMF 229
GDIARL RCT ++T G DG I R KPF Y YEKEI+
Sbjct: 184 GDIARLERCTDIVTKGPDGSEDDQHQEGCGSSGSNGIGVGGSGIRRSKPFMYAYEKEIVM 243
Query: 230 TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP 289
YAYFK+LDYFSTECIYSPNAYRG+AR F+KDLE +RP +I+DII+S + S K
Sbjct: 244 -YAYFKKLDYFSTECIYSPNAYRGYARTFLKDLEAIRPSSIVDIIQS-----VKQSRKTQ 297
Query: 290 EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI--VRSRGQNNERTKDMKQ 340
Q C RCGYISS CKAC+LLEGL +G P++GI +SR + R+++ K+
Sbjct: 298 LQ-NCLRCGYISSNTVCKACILLEGLEKGTPQLGIGSEKSRKIKDIRSENSKE 349
>gi|118378423|ref|XP_001022387.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89304154|gb|EAS02142.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 320
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/316 (65%), Positives = 248/316 (78%), Gaps = 6/316 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+ C TC +KA + RPKT + IC+ECF+ FEEEIH I+ N LFK GERIA+GASGGKD
Sbjct: 3 KFCETCKDKKAFIVRPKTGKLICQECFFTAFEEEIHYTIISNNLFKRGERIAVGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL V++ LN++++YGL+L LLSIDEGI+GYRDDSL+TVK N++ YGL LKI+SYKDL
Sbjct: 63 STVLIHVMNHLNKKYDYGLELILLSIDEGITGYRDDSLETVKDNQVTYGLQLKILSYKDL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDEIVK IGL NNCTFCGVFRRQALDRGA LL DKI TGHNADDIAET+L+NI R
Sbjct: 123 YGWTMDEIVKQIGLNNNCTFCGVFRRQALDRGAQLLNCDKILTGHNADDIAETILMNIAR 182
Query: 194 GDIARLSRCTLITT-----GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
GD RL RC ITT +D IPR KPFKYTYEKEI+ YAY K+L YFSTECIYSP
Sbjct: 183 GDFFRLGRCVQITTGGDGVDDDDHIPRLKPFKYTYEKEIVL-YAYHKKLVYFSTECIYSP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
NAYRG RE IKD+E++RP +I+DII S E I+ + K+P++ C +CG++SS CKA
Sbjct: 242 NAYRGHVRELIKDIEKVRPSSIVDIIHSAEQIAININVKLPKKMKCTQCGFVSSNSICKA 301
Query: 309 CVLLEGLNRGLPKMGI 324
C LL+ LN+G PK+ +
Sbjct: 302 CGLLDKLNKGKPKVAL 317
>gi|312377717|gb|EFR24478.1| hypothetical protein AND_10897 [Anopheles darlingi]
Length = 357
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/301 (66%), Positives = 245/301 (81%), Gaps = 3/301 (0%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
++RPKT + +CR+CF+ FE EIH I QLF+AGE++AI ASGGKDSTVLA V+ LN
Sbjct: 1 MRRPKTNDALCRDCFFLAFETEIHNTIQQEQLFRAGEKVAIAASGGKDSTVLAHVMKVLN 60
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
R+NYGL+L LLSIDEGI+GYRDDSL+TV +N YG+PL+I+SY++LYGWTMD IV I
Sbjct: 61 ERYNYGLNLVLLSIDEGITGYRDDSLKTVAQNRDDYGMPLRILSYQELYGWTMDRIVAEI 120
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
G NNCTFCGVFRRQALDRGA L++VD +ATGHNADDIAETV++NILRGD ARL RC I
Sbjct: 121 GRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGDTARLRRCCDI 180
Query: 206 TTGE--DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
TG + IPR KP KY+YEKEI+ YA+FK+L YFSTEC+++PNAYRG AR F+KDLE
Sbjct: 181 KTGSKANDTIPRVKPLKYSYEKEIVM-YAHFKKLVYFSTECVFAPNAYRGHARAFLKDLE 239
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
++RP AI+DII +GE +I + K P +G C RCG++SSQ+ CKACVLLEGLNRGLPK+G
Sbjct: 240 KVRPSAIMDIIHAGEQLQIKGTVKKPVRGICGRCGFVSSQQPCKACVLLEGLNRGLPKLG 299
Query: 324 I 324
I
Sbjct: 300 I 300
>gi|213408567|ref|XP_002175054.1| ATP-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212003101|gb|EEB08761.1| ATP-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 347
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/340 (61%), Positives = 254/340 (74%), Gaps = 10/340 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC CN + + RPKT ++IC+ CFY VFE EIH VI+ N+LF GE I IGASGGKD
Sbjct: 10 RLCELCNAERPVMVRPKTSQKICKNCFYRVFETEIHNVIIDNKLFHRGESIGIGASGGKD 69
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+V+ LN R++YGL L L+S+DEGI GYRDDSL TVKRN+ QY LP+ IVSY++L
Sbjct: 70 STVLAYVMKLLNERYDYGLKLHLISVDEGIRGYRDDSLATVKRNQQQYELPMTIVSYEEL 129
Query: 134 Y-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
Y GWTMD IV IG KNNCT+CGVFRRQALDR A L + I TGHNADDIAETVL+N+L
Sbjct: 130 YDGWTMDRIVSKIGAKNNCTYCGVFRRQALDRAALSLGIKHILTGHNADDIAETVLMNLL 189
Query: 193 RGDIARLSRCTLITT-GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGDIARL R T ITT E P R KPFKYTYEKEI+ YA++K+LDYFSTEC YSP A+
Sbjct: 190 RGDIARLPRSTEITTMSETSPTKRSKPFKYTYEKEIVL-YAHYKKLDYFSTECTYSPEAF 248
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTST--KMPEQGTCERCGYISSQKWCKAC 309
RG AR IK LERLRP +ILDII SGE ++ST+ ++PEQ C RCG+ISS CKAC
Sbjct: 249 RGTARALIKQLERLRPSSILDIIYSGEAMKLSTTVQKQLPEQKKCVRCGFISSNDVCKAC 308
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIES 349
LLEGLN G+ +GI +N + + +K+ + +N+++
Sbjct: 309 TLLEGLNNGISGLGI-----GSNRKARRLKEKQSAENVQA 343
>gi|256078261|ref|XP_002575415.1| cancer-associatedprotein protein [Schistosoma mansoni]
gi|353230407|emb|CCD76578.1| putative cancer-associatedprotein protein [Schistosoma mansoni]
Length = 315
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 244/310 (78%), Gaps = 2/310 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C Q K +KRPKT + +C+ECF FEEEIH I +L G++IAIGASGGKDS
Sbjct: 4 LCCRC-QSKGYIKRPKTSDIMCKECFSWCFEEEIHWTISHAKLISRGDKIAIGASGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA++L+ LN+R++YG +L LLSIDEGISGYRDDSL TV+RN+IQY LPLKI+SY+DLY
Sbjct: 63 TVLAYILNLLNKRYDYGAELLLLSIDEGISGYRDDSLMTVQRNQIQYSLPLKILSYQDLY 122
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD+IVK IG K NCT+CG+FRRQALD+GA LL +KI TGHNADDIAETVL+NILRG
Sbjct: 123 GWSMDDIVKHIGNKRNCTYCGIFRRQALDKGALLLGANKICTGHNADDIAETVLMNILRG 182
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DI RL RCT + TG D +PR KPFKY YEKEI+ YA+ +LDYFSTEC Y+P AYRG
Sbjct: 183 DIGRLKRCTAMMTGTDDILPRFKPFKYAYEKEIVM-YAHMHKLDYFSTECKYAPQAYRGH 241
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
R FIKDLER+RPR I+DII SGE I + KMP++ CE+C ISSQ C+AC+LLE
Sbjct: 242 VRAFIKDLERIRPRTIIDIIASGERMAIRSDVKMPQKSICEKCKCISSQPICQACILLEQ 301
Query: 315 LNRGLPKMGI 324
LN GLP++ I
Sbjct: 302 LNSGLPQITI 311
>gi|312281579|dbj|BAJ33655.1| unnamed protein product [Thellungiella halophila]
Length = 253
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/230 (87%), Positives = 219/230 (95%), Gaps = 1/230 (0%)
Query: 1 MEVAESKSKKAGG-RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFK 59
ME E+KSKKAGG RLC CNQR+ LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK
Sbjct: 1 MEAGEAKSKKAGGPRLCCICNQRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVVNRLFK 60
Query: 60 AGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEI 119
+GER+AIGASGGKDSTVLA+VLSELNRRH+YGLDLFLLSIDEGI+GYRDDSL+TVKRNE+
Sbjct: 61 SGERVAIGASGGKDSTVLAYVLSELNRRHSYGLDLFLLSIDEGITGYRDDSLETVKRNEL 120
Query: 120 QYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
QYGLPL+I+SYKDLYGWTMDEIVK+IGLKNNCTFCGVFRRQALDRGA+LLKVDK+ TGHN
Sbjct: 121 QYGLPLQILSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHN 180
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
ADDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+
Sbjct: 181 ADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVI 230
>gi|392574193|gb|EIW67330.1| hypothetical protein TREMEDRAFT_64583 [Tremella mesenterica DSM
1558]
Length = 363
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/319 (63%), Positives = 247/319 (77%), Gaps = 11/319 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C+ CFY VFE E+H I G +F GE++AIGASGGKDS
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKSCFYSVFETEVHNTITEGQGIFHRGEKVAIGASGGKDS 65
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL+ LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+++YGLPLKI+SY +LY
Sbjct: 66 TVLAHVLTLLNQRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQVEYGLPLKILSYNELY 125
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN---- 190
GWTMD IV+ +G KNNCTFCGVFRRQALDRGA+ L +D I TGHNADD+AETVL+N
Sbjct: 126 GWTMDRIVEQVGRKNNCTFCGVFRRQALDRGAAQLGIDHIVTGHNADDMAETVLMNSKIT 185
Query: 191 ---ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
++RGDIARL R +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIY+
Sbjct: 186 ALELMRGDIARLGRSMALTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYA 244
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKW 305
P+AYRG AR F+KDLE +RP AI+DII SGE F + S + + E TC RCGYISS
Sbjct: 245 PDAYRGHARVFLKDLEAIRPSAIIDIIHSGETFVLEQSVQKGLKEMQTCLRCGYISSNDL 304
Query: 306 CKACVLLEGLNRGLPKMGI 324
CKAC LLEGL GL + +
Sbjct: 305 CKACALLEGLEAGLDRSAL 323
>gi|268552227|ref|XP_002634096.1| Hypothetical protein CBG01646 [Caenorhabditis briggsae]
gi|226711413|sp|A8WR63.1|CTU1_CAEBR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
Length = 372
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/305 (62%), Positives = 243/305 (79%), Gaps = 1/305 (0%)
Query: 24 AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE 83
A +++ K Q+C CF + FE+++H+ I+ N LFK GER+AIGASGGKDSTVLAFV+
Sbjct: 20 AKIRKAKNGAQLCGPCFSKSFEDDVHETIINNNLFKRGERVAIGASGGKDSTVLAFVMKT 79
Query: 84 LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 143
LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL I+SY DLYGWTMD+IV
Sbjct: 80 LNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPLTILSYNDLYGWTMDDIVA 139
Query: 144 VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT 203
IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AETVL+N+LRGDIARL RCT
Sbjct: 140 KIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCT 199
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
I TGE+G +PR KP KY +E++I+ YA +L+YF TECIY+PNAYRG+AR++++DLE
Sbjct: 200 NIVTGEEGDLPRAKPLKYCFERDIVM-YARSNQLEYFYTECIYAPNAYRGYARKYVRDLE 258
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
++ PRAILD+I+SGE + +MP TCERCGY++SQK CKAC+L+EGLN G +G
Sbjct: 259 KVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQKMCKACLLIEGLNTGNTDLG 318
Query: 324 IVRSR 328
+ +S+
Sbjct: 319 VRKSK 323
>gi|50292393|ref|XP_448629.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608911|sp|Q6FMB5.1|CTU1_CANGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49527941|emb|CAG61592.1| unnamed protein product [Candida glabrata]
Length = 358
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/320 (61%), Positives = 244/320 (76%), Gaps = 9/320 (2%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA L+RPK L++IC+ECFY VFE EIH IV N LF+ GE++AIGASGGK
Sbjct: 19 SQLCELCHGRKAVLRRPKNLQKICKECFYYVFETEIHNTIVSNNLFQRGEKVAIGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN RH+YG+ L LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS++D
Sbjct: 79 DSTVLAHILKLLNDRHDYGVKLVLLSIDEGIVGYRDDSLATVKRNQKQYQLPLEIVSFRD 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV + G++N+CT+CGVFRRQALDRGA+ L ++ + TGHNADD+AETVL+NIL
Sbjct: 139 LYDWTMDEIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAETVLMNIL 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL R T I T G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 199 RGDVARLERSTAIITQSAGSPIRRSKPFKYCYQKEIVL-YAHYKKLDYFSTECTYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT-------CERCGYISSQK 304
RG ARE +K+LE +RP I+DII+SGEN + + P CERCGY+SS K
Sbjct: 258 RGTARELMKNLEAVRPSCIIDIIQSGENLVLKKKKRHPNSKVEFKDGNRCERCGYLSSNK 317
Query: 305 WCKACVLLEGLNRGLPKMGI 324
CKAC+LL+GL + M I
Sbjct: 318 ICKACMLLQGLEKNRASMSI 337
>gi|226711412|sp|A2Q879.1|CTU1_ASPNC RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|134054862|emb|CAK36876.1| unnamed protein product [Aspergillus niger]
Length = 341
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/321 (61%), Positives = 240/321 (74%), Gaps = 2/321 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ ++A + RPK +++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL IVSY DLYG
Sbjct: 66 VLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ ++LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR IKDLE++RP +ILDI+KSGE+ + K GTCERCGYISSQ+ CKAC LLEG
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMALLKKVKSQVLGTCERCGYISSQRVCKACTLLEG 304
Query: 315 LNRGLPKMGIVRSRGQNNERT 335
LN+ PK I G +E +
Sbjct: 305 LNKNRPKTAIEMEIGLEDEES 325
>gi|403173679|ref|XP_003332730.2| hypothetical protein PGTG_14395 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170647|gb|EFP88311.2| hypothetical protein PGTG_14395 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 372
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/356 (59%), Positives = 253/356 (71%), Gaps = 48/356 (13%)
Query: 15 LCSTCNQ-------RKAALKRPKTLEQICRECFYEVFEEEIHQVIVG--NQ--------- 56
LCST + R+A LKRPKT + ICRECFY +FE EIH I+G NQ
Sbjct: 6 LCSTLSAENRPKVPRRAILKRPKTGQAICRECFYLIFETEIHHTILGLGNQEKRRAEEKR 65
Query: 57 --------------------LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFL 96
+FK GE++AI ASGGKDSTVLA V++ LN R+NYGLDL+L
Sbjct: 66 TSLESTQQDQELSNTENGRMMFKKGEKVAIAASGGKDSTVLAHVMTTLNERYNYGLDLYL 125
Query: 97 LSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIGLKNNCTFCG 155
LSIDEGI+GYRDDSL+TVKRN QY LPLK++SY +LY GWTMD++V+ +G K+NCTFCG
Sbjct: 126 LSIDEGITGYRDDSLETVKRNSSQYSLPLKVLSYNELYQGWTMDKVVENVGRKSNCTFCG 185
Query: 156 VFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG---- 211
VFRRQALD+GA LLKVD I TGHNADD+AETVL+N+LRGDIARL RCT ITTG
Sbjct: 186 VFRRQALDKGADLLKVDHIVTGHNADDVAETVLMNVLRGDIARLERCTEITTGGTAKGTS 245
Query: 212 --PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
P+ R KPFKY YEKEI+ YAYFK+LDYFSTEC YSP AYRG AR +KDLERLRP A
Sbjct: 246 GIPVKRSKPFKYAYEKEIVM-YAYFKKLDYFSTECTYSPEAYRGHARALVKDLERLRPSA 304
Query: 270 ILDIIKSGENF--RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
ILDII SGE+ + ++ K P Q +C RCG ++SQ C+AC L++GLN K+G
Sbjct: 305 ILDIIYSGESMASAVKSNVKRPTQQSCLRCGSLASQLLCQACALIDGLNASNNKLG 360
>gi|363748102|ref|XP_003644269.1| hypothetical protein Ecym_1204 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887901|gb|AET37452.1| hypothetical protein Ecym_1204 [Eremothecium cymbalariae
DBVPG#7215]
Length = 373
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/339 (59%), Positives = 251/339 (74%), Gaps = 26/339 (7%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L++IC+ CF+ VFE EIH IV N+LF+ GERIA+GASGGK
Sbjct: 17 AQLCEICHSRKALMKRPKNLQKICKLCFFCVFETEIHNTIVTNKLFQKGERIAVGASGGK 76
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+VL LN RHNYG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL+IVSY+D
Sbjct: 77 DSTVLAYVLKLLNERHNYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPLEIVSYRD 136
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV G++N+CT+CGVFRRQALDRGA LL ++ + TGHNADD+AETVL+NIL
Sbjct: 137 LYNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAGLLGINHVVTGHNADDMAETVLMNIL 196
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 197 RGDVARLDKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAF 255
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTS--TKMP-------------------- 289
RG ARE +K+LE +RP I+DII SGE+FR+ K P
Sbjct: 256 RGTARELMKNLEAVRPSCIIDIIHSGESFRLKPKRVKKAPPADHIEVRSDGSVSLQRGNS 315
Query: 290 --EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVR 326
+ CERCGY+SS + CKAC+LLEGL R K+ I R
Sbjct: 316 FVDGNRCERCGYLSSNRICKACMLLEGLERSRAKVMIDR 354
>gi|297720175|ref|NP_001172449.1| Os01g0598900 [Oryza sativa Japonica Group]
gi|255673426|dbj|BAH91179.1| Os01g0598900 [Oryza sativa Japonica Group]
Length = 525
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 232/314 (73%), Gaps = 64/314 (20%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQIC------------------RECFYEVFEEEIHQV 51
+AG RLC+ C++RKAALKRPKTLEQ+C RECFY VFE+EIHQ
Sbjct: 242 RAGSRLCTRCSERKAALKRPKTLEQLCLYAPHIFRVVCPDVSRQSRECFYIVFEDEIHQT 301
Query: 52 IVGNQLFKAGERIAIGASGGK--DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
IV N LFK G+R+AIGASGGK D+T L
Sbjct: 302 IVENNLFKPGDRVAIGASGGKVADTTDL-------------------------------- 329
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
+QYGLPLKI+SYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGA+LL
Sbjct: 330 ---------LQYGLPLKIISYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALL 380
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KVDKI TGHNADDIAETVLLNILRGDIARLSRCT ITTGEDGPIPRCKPFKYTYEKEI+
Sbjct: 381 KVDKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVI 440
Query: 230 TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP 289
Y Y+ FS CIYSPNAYRGFAREFIKDLER+RPRAILDIIKSGENFRIST+T+MP
Sbjct: 441 -YPYYAISHIFS--CIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMP 497
Query: 290 EQGTCERCGYISSQ 303
EQGTCERCGYISSQ
Sbjct: 498 EQGTCERCGYISSQ 511
>gi|226711464|sp|A5DPQ4.2|CTU1_PICGU RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190348662|gb|EDK41157.2| hypothetical protein PGUG_05255 [Meyerozyma guilliermondii ATCC
6260]
Length = 369
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/339 (58%), Positives = 247/339 (72%), Gaps = 30/339 (8%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+Q KA +KRPK L+++C+ECFY VFE EIH IV QLFK G+++AIGASGGKDS
Sbjct: 11 LCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKVAIGASGGKDS 70
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +PL+I+SYKDLY
Sbjct: 71 TVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLY 130
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA+ L++D + TGHNADD+AETVL+N+LRG
Sbjct: 131 NWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLLRG 190
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
DIARL R C+++T+ E PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 191 DIARLERSCSILTSSEGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECSYAPEAFRG 249
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTS---------------------------- 285
ARE +K LE +RP I+DII SGE+ ++
Sbjct: 250 TARELLKALESVRPSCIMDIIYSGEHLVVAHKKKRTTEKYKNKPKKNIETEVNSDGSVNL 309
Query: 286 TKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TK + CE+CGY+SS K CKACVLL GL PK+ I
Sbjct: 310 TKKTDGSRCEKCGYLSSNKICKACVLLAGLEMNRPKVNI 348
>gi|146412528|ref|XP_001482235.1| hypothetical protein PGUG_05255 [Meyerozyma guilliermondii ATCC
6260]
Length = 369
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/339 (58%), Positives = 246/339 (72%), Gaps = 30/339 (8%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+Q KA +KRPK L+++C+ECFY VFE EIH IV QLFK G+++AIGASGGKDS
Sbjct: 11 LCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKVAIGASGGKDS 70
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +PL+I+SYKDLY
Sbjct: 71 TVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLY 130
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA+ L++D + TGHNADD+AETVL+N+LRG
Sbjct: 131 NWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLLRG 190
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
DIARL R C+++T E PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 191 DIARLERSCSILTLSEGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECSYAPEAFRG 249
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTS---------------------------- 285
ARE +K LE +RP I+DII SGE+ ++
Sbjct: 250 TARELLKALESVRPSCIMDIIYSGEHLVVAHKKKRTTEKYKNKPKKNIETEVNSDGSVNL 309
Query: 286 TKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TK + CE+CGY+SS K CKACVLL GL PK+ I
Sbjct: 310 TKKTDGSRCEKCGYLSSNKICKACVLLAGLEMNRPKVNI 348
>gi|405120927|gb|AFR95697.1| mitochondrial protein [Cryptococcus neoformans var. grubii H99]
Length = 348
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 241/295 (81%), Gaps = 7/295 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDS 74
CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGK
Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGK-- 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+++YGLPLKI+SY +LY
Sbjct: 64 -VLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQVEYGLPLKILSYSELY 122
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+ +G KNNCTFCGVFRRQALDRGA+ L VD I TGHNADDIAETVL+NI+RG
Sbjct: 123 GWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRG 182
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DIARL+RCT +TT + I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP+AYRG
Sbjct: 183 DIARLARCTAVTTQSEDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPDAYRGH 241
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCK 307
AR F+KDLE +RP AI+DII SGE+F + S + M TC RCGYISS C+
Sbjct: 242 ARVFLKDLEAVRPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCR 296
>gi|50303243|ref|XP_451563.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607581|sp|Q6CWX6.1|CTU1_KLULA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49640695|emb|CAH01956.1| KLLA0B00737p [Kluyveromyces lactis]
Length = 371
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/335 (59%), Positives = 247/335 (73%), Gaps = 24/335 (7%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L++IC+ECF+ VFE EIH IV N LF GERIA+GASGGK
Sbjct: 17 SQLCELCHARKAVMKRPKNLQRICKECFFSVFETEIHNTIVSNNLFHRGERIAVGASGGK 76
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+VL LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL+IVSYKD
Sbjct: 77 DSTVLAYVLKLLNDRHDYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPLEIVSYKD 136
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV G++N+CT+CGVFRRQALDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 137 LYNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNIL 196
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 197 RGDVARLEKSTSILTQSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAF 255
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFR----------------------ISTSTKMP 289
RG ARE +K+LE +RP I+DII SGE+ + +S +
Sbjct: 256 RGTARELMKNLEAIRPSCIIDIIHSGESLKLKPKRAKKAPPPSHMEIRPDGSVSLQNEFI 315
Query: 290 EQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ CERCGY+SS K CKAC+LLEGL + K+ +
Sbjct: 316 DGNRCERCGYLSSNKICKACMLLEGLEQNRAKIQL 350
>gi|407410155|gb|EKF32702.1| hypothetical protein MOQ_003448 [Trypanosoma cruzi marinkellei]
Length = 329
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 250/327 (76%), Gaps = 6/327 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C++ KAA+KRP+ + +C++CF+ +FEEE+H+ I+ +LF +G+ +A GASGGKD
Sbjct: 5 RLCIHCSEEKAAVKRPRNGQLLCQKCFFHLFEEEVHETIMTEKLFTSGDVVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN RH YG+ + LLSIDEGI+GYRDDSL+TV RN +Y LPL+++SYKDL
Sbjct: 65 STVLMHLMKLLNERHGYGVQILLLSIDEGITGYRDDSLKTVHRNSAEYELPLRVLSYKDL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+V++ GL+N+CTFCGVFRRQALDRGA+LL KI TGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVRLSGLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSRCT T DG IPR KP KY YEKEI+ YA+ K+LDYF+TEC YS A+R
Sbjct: 185 ADLPRLSRCTSAITAGDGIIPRVKPLKYAYEKEIVL-YAHLKKLDYFTTECSYSREAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR +K++E+L+PR ILD I+SGE R+ +PE +G C RCGY++SQK C+ACVL
Sbjct: 244 EARTLLKEMEKLQPRCILDTIRSGERLRVKERESVPENPKGFCVRCGYVTSQKLCRACVL 303
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDM 338
L+ L+ G P M + RGQ E+ +M
Sbjct: 304 LQALSSGDPMMAV---RGQYQEKQSEM 327
>gi|45191038|ref|NP_985292.1| AER437Cp [Ashbya gossypii ATCC 10895]
gi|74693248|sp|Q755T1.1|CTU1_ASHGO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|44984106|gb|AAS53116.1| AER437Cp [Ashbya gossypii ATCC 10895]
gi|374108518|gb|AEY97425.1| FAER437Cp [Ashbya gossypii FDAG1]
Length = 373
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/343 (57%), Positives = 252/343 (73%), Gaps = 26/343 (7%)
Query: 8 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIG 67
+K G+LC C+ RKA +KRPK L+++C+ CF+ VFE EIH I+ N+LF+ GER+A+G
Sbjct: 12 AKVTAGQLCELCHARKALVKRPKNLQKVCKLCFFHVFETEIHNTIMENKLFQRGERVAVG 71
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
ASGGKDSTVLA++L LN RH+YGL++ LLSIDEGI GYRDDSL TVKRN+ QYGLPLKI
Sbjct: 72 ASGGKDSTVLAYILKLLNERHDYGLEIVLLSIDEGIVGYRDDSLATVKRNQEQYGLPLKI 131
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
VSYKDLY WTMDEIV G++N+CT+CGVFRRQALDRGA++L + + TGHNADD+AETV
Sbjct: 132 VSYKDLYDWTMDEIVACAGMRNSCTYCGVFRRQALDRGAAMLDIHHVVTGHNADDMAETV 191
Query: 188 LLNILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
L+NILRGD+ARL + T I T G P+ R KPFKY Y+KEI+ YA++K+LDYFSTEC Y
Sbjct: 192 LMNILRGDVARLEKSTAILTQSSGSPVKRSKPFKYAYQKEIVL-YAHYKKLDYFSTECSY 250
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST----------STKMPEQGT--- 293
+P A+RG ARE +K+LE +RP I+DII SGE R+ S ++ G+
Sbjct: 251 APEAFRGTARELMKNLEAVRPSCIIDIIHSGEALRLRPRPKKRAPPPGSVEIRADGSASL 310
Query: 294 -----------CERCGYISSQKWCKACVLLEGLNRGLPKMGIV 325
CERCGY+SS + CKAC+LLEGL + ++ I
Sbjct: 311 FRNEGFVDGNRCERCGYLSSNRICKACMLLEGLEKNRARVQIA 353
>gi|341890999|gb|EGT46934.1| hypothetical protein CAEBREN_25375 [Caenorhabditis brenneri]
Length = 372
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/301 (62%), Positives = 240/301 (79%), Gaps = 1/301 (0%)
Query: 24 AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE 83
A +++ K Q+C CF + FE+++H+ IV N LFK GER+AIGASGGKDSTVLA+V+
Sbjct: 20 AKIRKAKDGAQLCGPCFSKNFEDDVHETIVNNNLFKRGERVAIGASGGKDSTVLAYVMKT 79
Query: 84 LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 143
LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL I+SY+DLYGWTMD+IV
Sbjct: 80 LNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIVA 139
Query: 144 VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT 203
IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AETVL+N+LRGDIARL RCT
Sbjct: 140 KIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCT 199
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
I TGE+G +PR KP KY +E++I+ YA +L+YF TECIY+PNAYRG+AR++++DLE
Sbjct: 200 NIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTECIYAPNAYRGYARKYVRDLE 258
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
++ PRAILD+I+SGE + +MP CERCGY++SQK CKAC+L+EGLN G +G
Sbjct: 259 KVHPRAILDLIQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTGNTDLG 318
Query: 324 I 324
+
Sbjct: 319 V 319
>gi|341892554|gb|EGT48489.1| hypothetical protein CAEBREN_07622 [Caenorhabditis brenneri]
Length = 372
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/301 (62%), Positives = 240/301 (79%), Gaps = 1/301 (0%)
Query: 24 AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE 83
A +++ K Q+C CF + FE+++H+ IV N LFK GER+AIGASGGKDSTVLA+V+
Sbjct: 20 AKIRKAKDGAQLCGPCFSKNFEDDVHETIVNNNLFKRGERVAIGASGGKDSTVLAYVMKT 79
Query: 84 LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 143
LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL I+SY+DLYGWTMD+IV
Sbjct: 80 LNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIVA 139
Query: 144 VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT 203
IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AETVL+N+LRGDIARL RCT
Sbjct: 140 KIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCT 199
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
I TGE+G +PR KP KY +E++I+ YA +L+YF TECIY+PNAYRG+AR++++DLE
Sbjct: 200 NIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTECIYAPNAYRGYARKYVRDLE 258
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
++ PRAILD+I+SGE + +MP CERCGY++SQK CKAC+L+EGLN G +G
Sbjct: 259 KVHPRAILDLIQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTGNTDLG 318
Query: 324 I 324
+
Sbjct: 319 V 319
>gi|328855979|gb|EGG05102.1| hypothetical protein MELLADRAFT_36991 [Melampsora larici-populina
98AG31]
Length = 341
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 244/324 (75%), Gaps = 21/324 (6%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQ-----------LFKAGER 63
L S+ R+A +KRPKT + +CRECFY +FE EIH I+G Q +F+ GER
Sbjct: 10 LASSPTPRRAIIKRPKTAQAVCRECFYLIFETEIHNTILGCQQKRSQSGNSARMFRRGER 69
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+AI ASGGKDSTVLA V++ LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QY L
Sbjct: 70 VAIAASGGKDSTVLAHVMTTLNERYDYGLDLCLLSIDEGIKGYRDDSLETVKRNSSQYSL 129
Query: 124 PLKIVSYKDLY-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
PLK++SY +LY GWTMD++V+ +G K NCTFCGVFRRQALDRGA++L VD I TGHNADD
Sbjct: 130 PLKVLSYDELYQGWTMDKVVENVGRKGNCTFCGVFRRQALDRGANILGVDHIVTGHNADD 189
Query: 183 IAETVLLNILRGDIARLSRCTLITTG--EDG----PIPRCKPFKYTYEKEIMFTYAYFKR 236
IAETVL+N+LRGDIARL RCT ITTG G P+ R KPFKY YEKEI+ YAYFK+
Sbjct: 190 IAETVLMNVLRGDIARLERCTEITTGGVTSGMGGIPVKRSKPFKYAYEKEIVM-YAYFKK 248
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGTC 294
LDYFSTEC YSP AYRG AR +K+LER+RP +ILDII SGE + T K P Q +C
Sbjct: 249 LDYFSTECTYSPEAYRGHARALVKELERIRPSSILDIIYSGEAMAGAVKTDVKRPTQQSC 308
Query: 295 ERCGYISSQKWCKACVLLEGLNRG 318
RCG +SSQ C+AC L++GLN G
Sbjct: 309 TRCGSLSSQLICQACALVDGLNAG 332
>gi|366993451|ref|XP_003676490.1| hypothetical protein NCAS_0E00590 [Naumovozyma castellii CBS 4309]
gi|342302357|emb|CCC70129.1| hypothetical protein NCAS_0E00590 [Naumovozyma castellii CBS 4309]
Length = 364
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/312 (62%), Positives = 243/312 (77%), Gaps = 11/312 (3%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA LKRPK ++++C+ CF+ VFE EIH I+ N LF GER+A+GASGGKD
Sbjct: 24 QLCELCHARKAILKRPKNMQKVCKLCFFHVFETEIHNTIIDNNLFYRGERVAVGASGGKD 83
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN RH+YG+D+ LLS+DEGI GYRDDSL TVKRN+ QYGLPL+IVS+K+L
Sbjct: 84 STVLAHMLKLLNERHDYGIDIVLLSVDEGIIGYRDDSLATVKRNQKQYGLPLEIVSFKEL 143
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV G++N+CT+CGVFRRQALDRGA L ++ + TGHNADD+AETVL+NILR
Sbjct: 144 YNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAEKLGINHVITGHNADDMAETVLMNILR 203
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+R
Sbjct: 204 GDVARLEKSTAIITKSKGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECTYAPEAFR 262
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRI----STSTKMPEQG-----TCERCGYISSQ 303
G AREF+K+LE +RP I+DII SGEN + ++ TK G CE+CGY+SS
Sbjct: 263 GTAREFMKNLESVRPSCIIDIIHSGENLVLKKKDASQTKHGATGFVDGNRCEKCGYLSSN 322
Query: 304 KWCKACVLLEGL 315
K CKAC+LLEGL
Sbjct: 323 KKCKACILLEGL 334
>gi|17540090|ref|NP_499865.1| Protein TUT-1 [Caenorhabditis elegans]
gi|74960582|sp|O76365.1|CTU1_CAEEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
gi|373253825|emb|CCD62179.1| Protein TUT-1 [Caenorhabditis elegans]
Length = 373
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/301 (62%), Positives = 240/301 (79%), Gaps = 1/301 (0%)
Query: 24 AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE 83
A +++ K Q+C CF FE+++H+ IV N+LFK GER+AIGASGGKDSTVLA+V+
Sbjct: 20 AKIRKAKDGAQLCGPCFSRNFEDDVHEAIVNNKLFKRGERVAIGASGGKDSTVLAYVMKT 79
Query: 84 LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 143
LN RH+YGLDL LLSIDEGI GYRDDSL V++N ++YGLPL I+SY+DLYGWTMD+IV
Sbjct: 80 LNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIVA 139
Query: 144 VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT 203
IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+AET+L+N+LRGDIARL RCT
Sbjct: 140 KIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARLERCT 199
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
I TGE+G +PR KP KY +E++I+ YA +L+YF TECIY+PNAYRG+AR++++DLE
Sbjct: 200 NIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTECIYAPNAYRGYARKYVRDLE 258
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
++ PRAILD+I+SGE + +MP CERCGY++SQK CKAC+L+EGLN G +G
Sbjct: 259 KVHPRAILDLIRSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTGNTDLG 318
Query: 324 I 324
+
Sbjct: 319 V 319
>gi|444318303|ref|XP_004179809.1| hypothetical protein TBLA_0C04940 [Tetrapisispora blattae CBS 6284]
gi|387512850|emb|CCH60290.1| hypothetical protein TBLA_0C04940 [Tetrapisispora blattae CBS 6284]
Length = 379
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 248/340 (72%), Gaps = 29/340 (8%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA ++RPK L++IC+ CFY VFE EIH IV +LF GE +A+GASGGK
Sbjct: 18 SQLCEICHSRKAIIRRPKNLQKICKLCFYHVFETEIHNTIVSTKLFYPGETVAVGASGGK 77
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+++ LN RH+YG+++ LLS+DEGI GYRDDSL TVKRN+ QY LPL+IVSYK+
Sbjct: 78 DSTVLAYIMKLLNERHHYGINIVLLSVDEGIVGYRDDSLATVKRNQKQYNLPLEIVSYKE 137
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV+++G++N+CT+CGV RRQALDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 138 LYNWTMDEIVEIVGIRNSCTYCGVLRRQALDRGANKLGIKHVVTGHNADDMAETVLMNIL 197
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T +G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 198 RGDVARLEKSTAILTESNGSPIKRSKPFKYMYQKEIVL-YAHYKKLDYFSTECTYAPEAF 256
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI---------------STSTKMPEQGT--- 293
RG ARE++K+LE +RP I+DII SGEN + + K+ + T
Sbjct: 257 RGTAREYMKNLEAIRPSCIIDIIHSGENLVLKPKQAKKKTTVKKSTANKNKIQNENTEDN 316
Query: 294 ---------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CERCGY+SS K CKAC+LLEGL PK+ +
Sbjct: 317 KQVFVDGNRCERCGYLSSNKICKACILLEGLEMNRPKVNV 356
>gi|71408111|ref|XP_806478.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70870240|gb|EAN84627.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 329
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 247/327 (75%), Gaps = 6/327 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C + KAA+KRP+ + +C++CF+ +FEEE+H+ I+ +LF +G+ +A GASGGKD
Sbjct: 5 RLCIHCCEEKAAVKRPRNGQLLCQKCFFHLFEEEVHETIMAEKLFTSGDVVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN RH YG+ + LLSIDEGI+GYRDDSL+TV RN +Y LPL+++SYK+L
Sbjct: 65 STVLMHLMKLLNERHGYGVQILLLSIDEGITGYRDDSLKTVHRNSAEYELPLRVMSYKEL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+V++ GL+N+CTFCGVFRRQALDRGA+LL KI TGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVRLSGLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSRCT T DG IPR KP KY YEKEI+ YA+ K+LDYF+TEC YS A+R
Sbjct: 185 ADLPRLSRCTSAITAGDGLIPRVKPLKYAYEKEIVL-YAHLKKLDYFTTECSYSREAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR +K++E+L+PR ILD I+SGE R+ +PE QG C RCGY++SQK C+ACVL
Sbjct: 244 EARTLLKEMEKLQPRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVL 303
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDM 338
L+ L G P + RGQ+ + +M
Sbjct: 304 LQALGSGDPMTAV---RGQHQKTQGEM 327
>gi|255940806|ref|XP_002561172.1| Pc16g08530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585795|emb|CAP93523.1| Pc16g08530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 341
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/321 (59%), Positives = 238/321 (74%), Gaps = 2/321 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +A + RPK ++CR CF ++FE E+H+ I+G LF GER+AIGASGGKDST
Sbjct: 6 CFNCKEARAVIIRPKNRHKLCRACFIKIFETEVHETIIGTNLFFPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL I+ Y +LYG
Sbjct: 66 VLAAVLKTLNERYDYGLDLCLLSIDEGIRGYRDDSLETVKRNAVQYDMPLDILGYSELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGIRHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG D I R KP KY YEKEI+ YA+ ++LDYF+TECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSDASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFTTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR IKDLE++RP +ILDI+KSGE+ + CERC YISSQ+ CKAC LL+G
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMAALVPVEAQTIKHCERCNYISSQRICKACTLLDG 304
Query: 315 LNRGLPKMGIVRSRGQNNERT 335
LNR PK I G +E +
Sbjct: 305 LNRNRPKTAIEVGVGMEDEES 325
>gi|367013774|ref|XP_003681387.1| hypothetical protein TDEL_0D05920 [Torulaspora delbrueckii]
gi|359749047|emb|CCE92176.1| hypothetical protein TDEL_0D05920 [Torulaspora delbrueckii]
Length = 378
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/340 (58%), Positives = 246/340 (72%), Gaps = 29/340 (8%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA L+RPK L++IC+ CFY +FE EIH IV N+LF GE++A+GASGGK
Sbjct: 19 SQLCELCHCRKALLRRPKNLQKICKLCFYHIFETEIHNTIVTNKLFFRGEKVAVGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+VL LN R++YG+D+ LLSIDEGI GYRDDSL TVKRN+IQY LPL+IVSY+D
Sbjct: 79 DSTVLAYVLKLLNERYDYGIDIVLLSIDEGIIGYRDDSLATVKRNQIQYDLPLEIVSYRD 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV G++N+CT+CGVFRRQALDRGA+ L + + TGHNADD+AETVL+NI
Sbjct: 139 LYDWTMDEIVACAGVRNSCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDMAETVLMNIF 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G P+ R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 199 RGDVARLEKSTAIITQSSGSPVKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI---------------------STSTKMPE 290
RG ARE +K+LE +RP I+DII SGEN + S K P
Sbjct: 258 RGTARELMKNLEMVRPSCIIDIIHSGENLVLKPKKEKRAPPPPKSMEIQSDGSVVLKRPS 317
Query: 291 QGT------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
T CERCGY+SS K CKAC+LLEGL + KM +
Sbjct: 318 TSTFVDGNKCERCGYLSSNKVCKACILLEGLEKNRAKMSL 357
>gi|407849594|gb|EKG04294.1| hypothetical protein TCSYLVIO_004657 [Trypanosoma cruzi]
Length = 329
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 246/327 (75%), Gaps = 6/327 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C + KAA+KRP+ + +C++CF+ +FEEE+H+ I+ +LF +G+ +A GASGGKD
Sbjct: 5 RLCIHCCEEKAAVKRPRNGQLLCQKCFFHLFEEEVHETIMAEKLFTSGDVVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN RH Y + + LLSIDEGI+GYRDDSL+TV RN +YGLPL+++SYK+L
Sbjct: 65 STVLMHLMKLLNERHGYDVQILLLSIDEGITGYRDDSLKTVHRNSAEYGLPLRVISYKEL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+V++ GL+N+CTFCGVFRRQALDRGA+LL KI TGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVRLSGLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSRCT T DG IPR KP KY YEKEI+ YA+ K+LDYF+TEC YS A+R
Sbjct: 185 ADLPRLSRCTSAITAGDGLIPRVKPLKYAYEKEIVL-YAHLKKLDYFTTECSYSREAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR +K++E+L+PR ILD I+SGE R+ +PE QG C RCGY++SQK C+ACVL
Sbjct: 244 EARTLLKEMEKLQPRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVL 303
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDM 338
L+ L P + RGQ+ + +M
Sbjct: 304 LQALGSRDPMTAV---RGQHQKTQSEM 327
>gi|365990547|ref|XP_003672103.1| hypothetical protein NDAI_0I02920 [Naumovozyma dairenensis CBS 421]
gi|343770877|emb|CCD26860.1| hypothetical protein NDAI_0I02920 [Naumovozyma dairenensis CBS 421]
Length = 367
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/327 (59%), Positives = 243/327 (74%), Gaps = 16/327 (4%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L++IC+ CF+ VFE EIH IV N LF GER+A+GASGGK
Sbjct: 21 SQLCELCHSRKAVIKRPKNLQKICKLCFFHVFETEIHNTIVTNNLFYKGERVAVGASGGK 80
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN ++NYG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS+K+
Sbjct: 81 DSTVLAHMLKYLNEKYNYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIVSFKE 140
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV G++N+CT+CGVFRRQALDRGA L + + TGHNADD+AETVL+NIL
Sbjct: 141 LYNWTMDEIVATAGIRNSCTYCGVFRRQALDRGAEKLGIHHVITGHNADDMAETVLMNIL 200
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA+FK+LDYFSTEC Y+P A+
Sbjct: 201 RGDVARLEKSTAIITKSKGSPIKRSKPFKYSYQKEIVL-YAHFKKLDYFSTECTYAPEAF 259
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI----------STSTKMP----EQGTCERC 297
RG AREF+K+LE +RP I+DII+SGEN + S K+ + C +C
Sbjct: 260 RGTAREFMKNLESVRPSCIIDIIQSGENLVLKQKKVHTNGQQNSNKVAGGFVDGNRCTKC 319
Query: 298 GYISSQKWCKACVLLEGLNRGLPKMGI 324
GY+SS CKAC+LLEGL R P + +
Sbjct: 320 GYLSSNDICKACILLEGLERNRPSITL 346
>gi|448106572|ref|XP_004200780.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|448109671|ref|XP_004201411.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|359382202|emb|CCE81039.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|359382967|emb|CCE80274.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
Length = 374
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 249/354 (70%), Gaps = 33/354 (9%)
Query: 3 VAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE 62
+ E + K G LC C+ RKA +KRPK L+++C+ECFY VFE EIH IVG++LFK G+
Sbjct: 1 MVEKQKKIKPGALCELCHGRKAVMKRPKNLQKLCKECFYNVFETEIHNTIVGHELFKKGD 60
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R+AIGASGGKDSTVLA VL LN R+NYG++L LLSIDEGI GYRDDSL TVKRN+ QY
Sbjct: 61 RVAIGASGGKDSTVLAAVLKTLNERYNYGVELVLLSIDEGIKGYRDDSLATVKRNQKQYE 120
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+PL+IVSYK+LY W+MDEIV G++++CT+CGV RRQALDRGA+ L +D + TGHNADD
Sbjct: 121 MPLEIVSYKELYDWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGIDHVVTGHNADD 180
Query: 183 IAETVLLNILRGDIARL-SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+AETVL+NILRGD ARL S C+++T PI R KPFKYTY+KEI+ YA++K+LDYFS
Sbjct: 181 VAETVLMNILRGDTARLESSCSILTQSSGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFS 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---------- 291
TEC Y+P A+RG ARE +K LE +RP I+DII SGE+ + K+ +Q
Sbjct: 240 TECSYAPEAFRGTARELLKSLESIRPSCIMDIIYSGEHLVLGQKKKVTQQRKKPNKIKND 299
Query: 292 ---------------------GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGYI+S + CKAC+LL GL K+ I
Sbjct: 300 MEQEVRSDGSIKIKQNETKDGNRCEKCGYITSNRICKACLLLGGLEANRAKLDI 353
>gi|255717669|ref|XP_002555115.1| KLTH0G01694p [Lachancea thermotolerans]
gi|238936499|emb|CAR24678.1| KLTH0G01694p [Lachancea thermotolerans CBS 6340]
Length = 373
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/337 (58%), Positives = 248/337 (73%), Gaps = 25/337 (7%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA +KRPK L++IC+ CF+ VFE EIH I+ N LF+ GE++A+GASGGKD
Sbjct: 19 QLCELCHSRKALIKRPKNLQKICKLCFFHVFETEIHNTIISNNLFEYGEKVAVGASGGKD 78
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+VL LN R+NYG+ + LLSIDEGI GYRDDSL TVKRN+ QYGLPL+IVSY++L
Sbjct: 79 STVLAYVLKLLNERYNYGIQIVLLSIDEGIVGYRDDSLATVKRNKEQYGLPLEIVSYREL 138
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV G++N+CT+CGVFRRQALDRGA+ L + + TGHNADD+AETVL+NILR
Sbjct: 139 YDWTMDEIVACAGVRNSCTYCGVFRRQALDRGAAKLGIRHVVTGHNADDMAETVLMNILR 198
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+R
Sbjct: 199 GDVARLEKSTAIMTQSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECTYAPEAFR 257
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRIST--STKMPEQGT----------------- 293
G ARE +K+LE +RP I+DII SGE+ R+ + + P G
Sbjct: 258 GTARELMKNLEAVRPSCIIDIIYSGESLRLKPKRTKRAPPAGHVEVCSDGSVSLNGGDFV 317
Query: 294 ----CERCGYISSQKWCKACVLLEGLNRGLPKMGIVR 326
CERCGY+SS + CKAC+LLEGL + K+ I R
Sbjct: 318 DGNRCERCGYLSSNRICKACMLLEGLQQNRAKLSIDR 354
>gi|145543226|ref|XP_001457299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425115|emb|CAK89902.1| unnamed protein product [Paramecium tetraurelia]
Length = 322
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/314 (60%), Positives = 242/314 (77%), Gaps = 7/314 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+ C +CN +KA + RPKT IC+ CF++ FE+EIH I+ Q+FK GE+IAI ASGGKD
Sbjct: 3 KYCQSCNTQKAFMVRPKTGNLICQNCFFQAFEDEIHHTIISTQMFKPGEKIAIAASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL V++ LN+++NYGL L+LLSIDEGI GYRDDSL+TVK+N+I Y L LKI+SYK+L
Sbjct: 63 STVLVHVITLLNKKYNYGLHLYLLSIDEGIKGYRDDSLETVKQNQITYDLELKILSYKEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+ W+MDE+V IGL NNCT+CGVFRRQ+LDRGA L VDKI TGHNADD+AET L+N+LR
Sbjct: 123 FNWSMDEVVAQIGLNNNCTYCGVFRRQSLDRGAIQLGVDKIITGHNADDMAETFLMNLLR 182
Query: 194 GDIARLSRCTLITTGEDG-----PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
GDI RL + T I TG+DG +PRCKPFKYTYEKEI+ YA++K+L YFSTEC YSP
Sbjct: 183 GDIFRLPKSTAIITGDDGDNGIATLPRCKPFKYTYEKEIVM-YAHYKKLIYFSTECTYSP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRI-STSTKMPEQGTCERCGYISSQKWCK 307
NA+RG RE IK+LE +RP A++D+I S E + + K+P++ C++C +SS K CK
Sbjct: 242 NAFRGHVRELIKNLEAIRPSAVIDLIHSCEQLDAPNQNQKLPQKQLCQKCNLLSSNKICK 301
Query: 308 ACVLLEGLNRGLPK 321
AC LLE LN+G K
Sbjct: 302 ACTLLESLNQGRAK 315
>gi|410081134|ref|XP_003958147.1| hypothetical protein KAFR_0F04170 [Kazachstania africana CBS 2517]
gi|372464734|emb|CCF59012.1| hypothetical protein KAFR_0F04170 [Kazachstania africana CBS 2517]
Length = 373
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 243/335 (72%), Gaps = 24/335 (7%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA LKRPK L+++C+ECF+ VFE EIH IV N +F GER+AIGASGGK
Sbjct: 19 SQLCEICHSRKAVLKRPKNLQKVCKECFFYVFETEIHNTIVSNNVFYRGERVAIGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+++ LN RHNYG+D+ LLS+DEGI GYRDDSL TV RN+ QY LPL+IVS+K+
Sbjct: 79 DSTVLAYLIKLLNERHNYGIDITLLSVDEGIVGYRDDSLATVMRNQKQYNLPLEIVSFKE 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV V G++N+CT+CG+FRRQ+LDRGA L++ + TGHNADD+AETVL+NIL
Sbjct: 139 LYDWTMDEIVAVAGIRNSCTYCGIFRRQSLDRGAEKLEIQHVITGHNADDMAETVLMNIL 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGDIARL + T I T G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 199 RGDIARLEKSTAIITQSKGSPIKRSKPFKYAYQKEIVL-YAHYKKLDYFSTECTYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRIS----------TSTKMPEQGT-------- 293
RG ARE +K+LE +RP I+DII SGEN + T K E+ T
Sbjct: 258 RGTARELMKNLEAVRPSCIIDIIHSGENLVLKDENERKKKQFTKNKNQEKATSAKKSTFV 317
Query: 294 ----CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGY+SS K CKAC LL L + K+ +
Sbjct: 318 DGNRCEKCGYLSSNKICKACTLLADLEKSRSKITL 352
>gi|195581776|ref|XP_002080706.1| GD10105 [Drosophila simulans]
gi|194192715|gb|EDX06291.1| GD10105 [Drosophila simulans]
Length = 329
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/317 (63%), Positives = 242/317 (76%), Gaps = 20/317 (6%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S C R AALKRPKT + +C+ECF+ FE EIH I + LF+ GE++A+ ASGGKDSTV
Sbjct: 7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
LA VL LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N Y +PLKI+SY++LYGW
Sbjct: 66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGW 125
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
TMD I+ R ALDRGA LL VD IATGHNADDIAETVL+N+LRGD
Sbjct: 126 TMDRILP--------------RSDALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDT 171
Query: 197 ARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
ARL RCT I T GED IPR KP KY+YEKEI+ YA++K+L YFSTEC+++PNAYRG
Sbjct: 172 ARLRRCTSIRTGGGED-TIPRVKPLKYSYEKEIVM-YAHYKKLVYFSTECVFAPNAYRGH 229
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR F+KDLE++RP I+DII SGE R + K PE+GTC RCG++SSQ+ CKACVLLEG
Sbjct: 230 ARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEG 289
Query: 315 LNRGLPKMGI-VRSRGQ 330
LNRGLPK+GI +S+G+
Sbjct: 290 LNRGLPKLGIGKKSKGE 306
>gi|156848278|ref|XP_001647021.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
gi|226711430|sp|A7TER7.1|CTU1_VANPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|156117704|gb|EDO19163.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 363
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 245/323 (75%), Gaps = 15/323 (4%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA ++RPK L++IC+ CF+ VFE EIH+ IV N LF GER+A+GASGGKD
Sbjct: 19 QLCELCHSRKAIIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGASGGKD 78
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+VL LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+I SY+DL
Sbjct: 79 STVLAYVLKLLNERHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDL 138
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMD+IV+ G++N+CT+CGV RRQALDRGA+ L++ + TGHNADD+AETVL+NILR
Sbjct: 139 YDWTMDDIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAETVLMNILR 198
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+R
Sbjct: 199 GDVARLEKSTSIMTSSTGSPIKRSKPFKYCYQKEIVL-YAHYKKLDYFSTECTYAPEAFR 257
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT-----------CERCGYIS 301
G ARE +K+ E +RP I+DII SGE+F + KM +Q CERCGY+S
Sbjct: 258 GTARELMKNFEAIRPSCIIDIIASGESFVL--KQKMGKQNKKKIITYNDGNRCERCGYLS 315
Query: 302 SQKWCKACVLLEGLNRGLPKMGI 324
S K CKAC+LLEGL + ++ I
Sbjct: 316 SNKICKACMLLEGLEKSRAQIKI 338
>gi|390368105|ref|XP_793633.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/257 (73%), Positives = 217/257 (84%), Gaps = 1/257 (0%)
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
S G+DSTVLA+VL LN +++YGLDL LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKI
Sbjct: 22 GSTGRDSTVLAYVLKLLNEKYDYGLDLVLLSVDEGITGYRDDSLETVKRNQQQYDLPLKI 81
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
VSY++LYGWTMD IVK IG KNNCTFCGVFRRQALDRGA L+ KI TGHNADDIAET+
Sbjct: 82 VSYEELYGWTMDSIVKQIGRKNNCTFCGVFRRQALDRGALLVNAGKIVTGHNADDIAETI 141
Query: 188 LLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
L+NILRGDIARL RC I TG +G +PRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYS
Sbjct: 142 LMNILRGDIARLRRCADIITGAEGALPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYS 200
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
PNAYRG+AR ++KDLE++R +I+DII SGE+ I KMP QGTC RC YISSQ CK
Sbjct: 201 PNAYRGYARAYLKDLEKIRSTSIIDIIHSGESLSIKKDVKMPTQGTCSRCAYISSQPVCK 260
Query: 308 ACVLLEGLNRGLPKMGI 324
AC LLEGLN+GLPK+GI
Sbjct: 261 ACTLLEGLNKGLPKLGI 277
>gi|340057456|emb|CCC51802.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 334
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/314 (58%), Positives = 236/314 (75%), Gaps = 5/314 (1%)
Query: 10 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
+ G RLC C KA LKRP+ + +C+ CF+++FE E+H+ +V +LF G+ +A GAS
Sbjct: 2 QCGRRLCGHCESEKAVLKRPRNGQLLCQTCFFQLFESEVHETVVKEKLFSPGDIVACGAS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVL ++ LN RH YG+ L LLSIDEGI+GYRDDSL+TV RN QY LPL ++S
Sbjct: 62 GGKDSTVLIHLMKLLNERHGYGVQLVLLSIDEGIAGYRDDSLKTVHRNAEQYSLPLHVLS 121
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
YKDLYGWTMDE+VK+ G +N+CTFCGVFRRQALDRGA++L K+ TGHNADD+AET+L+
Sbjct: 122 YKDLYGWTMDEVVKLTGFRNSCTFCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILM 181
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
N+LR D+ RLSRCT T DG +PR KP KY YEKEI+ YA+FKRLDYF+TEC YS
Sbjct: 182 NVLRADLPRLSRCTSAITAGDGLVPRVKPLKYAYEKEIVL-YAHFKRLDYFTTECTYSKE 240
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRI---STSTKMPEQGTCERCGYISSQKWC 306
A+R AR +K++E L+P ILD I+SGE R+ +ST+ P QG C +CGY++SQ +C
Sbjct: 241 AFRSEARNLLKNIEALQPSCILDTIRSGERLRVKEHESSTEHP-QGKCAKCGYVTSQTYC 299
Query: 307 KACVLLEGLNRGLP 320
+ACVLL LN G P
Sbjct: 300 RACVLLRALNTGCP 313
>gi|50550947|ref|XP_502947.1| YALI0D17600p [Yarrowia lipolytica]
gi|74634447|sp|Q6C8R5.1|CTU1_YARLI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49648815|emb|CAG81139.1| YALI0D17600p [Yarrowia lipolytica CLIB122]
Length = 365
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/343 (58%), Positives = 238/343 (69%), Gaps = 34/343 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C RKA LKRPKTL+ IC+ CFY VFE EIH IV + LF GER+AIGASGGKDS
Sbjct: 2 LCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYG+D LLSIDEGI GYRDDSL+TVKRN++QY + L++VSY +LY
Sbjct: 62 TVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELY 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD+IV IG KNNCT+CGVFRRQALDRG++ L + I TGHNADD+AETVL+N+LRG
Sbjct: 122 GWSMDQIVAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLLRG 181
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D ARL RCT L+T +D P+ R KP KY YEKEI+ YA++K+LDYFSTEC YSP A+RG
Sbjct: 182 DTARLDRCTELVTGSDDSPVKRSKPLKYAYEKEIVL-YAHYKKLDYFSTECTYSPEAFRG 240
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTST-----------------KMPEQGT--- 293
AR IK+LE +RP I+DII SGE F + +P G
Sbjct: 241 TARTLIKNLEAIRPSTIIDIIHSGEAFVLKKKKEKKGKGSVVVKAKVEEKPVPSGGCSVP 300
Query: 294 ------------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
C +CGY+S CKACVLLEGLN G KM I
Sbjct: 301 LAFDSSLGLSNRCTKCGYLSHNAVCKACVLLEGLNAGRAKMQI 343
>gi|344300460|gb|EGW30781.1| N-type ATP pyrophosphatase [Spathaspora passalidarum NRRL Y-27907]
Length = 380
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/342 (55%), Positives = 243/342 (71%), Gaps = 33/342 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ RKA +KRPK L+++C+ECFY VFE EIH I +LF G+ +AIGASGGKDS
Sbjct: 19 LCELCHSRKAVMKRPKNLQKLCKECFYHVFETEIHNTITSAKLFSPGDSVAIGASGGKDS 78
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R+NYGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 79 TVLASILKTLNERYNYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQYQMPLEIVSYKDLY 138
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
WTMDEIV G++++CT+CGV RRQALDRGA+ L ++ + TGHNADD+AETVL+NILRG
Sbjct: 139 DWTMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNILRG 198
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARL + C+++T P+ R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 199 DVARLEKSCSIMTESVGSPVKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECSYAPEAFRG 257
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIST-------------------------STKM 288
ARE +K LE +RP I+DII SGE+ ++ S +
Sbjct: 258 TARELLKSLEAIRPSCIMDIIYSGEHLSLAPKKKKTTVSYKNKKKLNAETEINSDGSVSL 317
Query: 289 PEQ------GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P++ CE+CGY+SS K CKAC+LL GL PK+ I
Sbjct: 318 PKKQEFKDGNICEKCGYLSSNKICKACILLAGLEMNRPKVSI 359
>gi|71402808|ref|XP_804271.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867153|gb|EAN82420.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 329
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 245/327 (74%), Gaps = 6/327 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C + KAA+KRP+ + +C++CF+ +FEEE+H+ I+ +LF +G+ +A GASGGKD
Sbjct: 5 RLCIHCCEEKAAVKRPRNGQLLCQKCFFHLFEEEVHETIMAEKLFTSGDVVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN RH Y + + LLSIDEGI+GYRDDSL+TV RN +Y LPL+++SYK+L
Sbjct: 65 STVLMHLMKLLNERHGYDVQILLLSIDEGITGYRDDSLKTVHRNSAEYELPLRVISYKEL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+V++ GL+N+CTFCGVFRRQALDRGA+LL KI TGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVRLSGLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSRCT T DG IPR KP KY YEKEI+ YA+ K+LDYF+TEC YS A+R
Sbjct: 185 ADLPRLSRCTSAITAGDGLIPRVKPLKYAYEKEIVL-YAHLKKLDYFTTECSYSREAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVL 311
AR +K++E+L+PR ILD I+SGE R+ +PE QG C RCGY++SQK C+ACVL
Sbjct: 244 EARTLLKEVEKLQPRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVL 303
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDM 338
L+ L P + RGQ+ + +M
Sbjct: 304 LQALGSRDPMTAV---RGQHQKTQSEM 327
>gi|50593215|ref|NP_011304.2| Ncs6p [Saccharomyces cerevisiae S288c]
gi|115502422|sp|P53088.3|CTU1_YEAST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|285812005|tpg|DAA07905.1| TPA: Ncs6p [Saccharomyces cerevisiae S288c]
gi|392299521|gb|EIW10615.1| Ncs6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 359
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/320 (58%), Positives = 242/320 (75%), Gaps = 10/320 (3%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GE++A+GASGGKD
Sbjct: 20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKD 79
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDL
Sbjct: 80 STVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDL 139
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILR
Sbjct: 140 YDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILR 199
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+R
Sbjct: 200 GDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFR 258
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQK 304
G ARE++K+LE +RP I+DII+SGEN + K + C RCGY+SS
Sbjct: 259 GTAREYMKNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNN 318
Query: 305 WCKACVLLEGLNRGLPKMGI 324
CKAC+LLEGL + ++ I
Sbjct: 319 ICKACMLLEGLEKSRAQVAI 338
>gi|226711431|sp|B3LHQ7.1|CTU1_YEAS1 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|226711432|sp|A6ZTX8.1|CTU1_YEAS7 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|151943606|gb|EDN61916.1| protein with a role in urmylation and in invasive and pseudohyphal
growth [Saccharomyces cerevisiae YJM789]
gi|190407148|gb|EDV10415.1| VEG136 protein [Saccharomyces cerevisiae RM11-1a]
gi|259146303|emb|CAY79560.1| Ncs6p [Saccharomyces cerevisiae EC1118]
gi|349578024|dbj|GAA23190.1| K7_Ncs6p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765747|gb|EHN07253.1| Ncs6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 359
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 242/321 (75%), Gaps = 10/321 (3%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GE++A+GASGGK
Sbjct: 19 SQLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KD
Sbjct: 79 DSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKD 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 139 LYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNIL 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+
Sbjct: 199 RGDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQ 303
RG ARE++K+LE +RP I+DII+SGEN + K + C RCGY+SS
Sbjct: 258 RGTAREYMKNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSN 317
Query: 304 KWCKACVLLEGLNRGLPKMGI 324
CKAC+LLEGL + ++ I
Sbjct: 318 NICKACMLLEGLEKSRAQVAI 338
>gi|406601554|emb|CCH46819.1| hypothetical protein BN7_6418 [Wickerhamomyces ciferrii]
Length = 381
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/351 (56%), Positives = 245/351 (69%), Gaps = 40/351 (11%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L++IC+ CFY VFE EIH IV N+LF GERIA+GASGGK
Sbjct: 11 SQLCELCHCRKAMIKRPKNLQKICKLCFYNVFETEIHNTIVNNKLFYPGERIAVGASGGK 70
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA++L LN R+NYG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVSYKD
Sbjct: 71 DSTVLAYILKLLNERYNYGVEIVLLSIDEGIVGYRDDSLATVKRNKEQYNLPLEIVSYKD 130
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY W+MDEIV G++N+CT+CGV RRQALDRGA+ L ++ + TGHNADD+AETVL+N+L
Sbjct: 131 LYNWSMDEIVSCAGIRNSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLL 190
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 191 RGDVARLEKSTTIMTSSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECTYAPEAF 249
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENF-------RISTSTKMPEQGT----------- 293
RG RE +K+LE +RP I+DII SGENF R P+Q T
Sbjct: 250 RGTTRELMKNLEAIRPSCIIDIIHSGENFVLREKKIRQQFRKNPPKQSTESKGGPINEEI 309
Query: 294 --------------------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGY+SS K CKAC+LLEGL K+ I
Sbjct: 310 EVRADGSISLNKKGFVDGNRCEKCGYLSSNKICKACMLLEGLEMNRAKISI 360
>gi|401625851|gb|EJS43839.1| ncs6p [Saccharomyces arboricola H-6]
Length = 359
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/321 (58%), Positives = 242/321 (75%), Gaps = 10/321 (3%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GERIA+GASGGK
Sbjct: 19 SQLCELCHSRKALIRRPKNLSKLCKQCFCSVFETEIHNTIVANNLFQRGERIAVGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KD
Sbjct: 79 DSTVLAHMLKLLNERYDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYGLPLEIFSFKD 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 139 LYNWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNIL 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+
Sbjct: 199 RGDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI--------STSTKMPEQGTCERCGYISSQ 303
RG ARE++K+LE +RP I+DII+SGEN + K + C +CGY+SS
Sbjct: 258 RGTAREYMKNLEAVRPSCIVDIIQSGENLALKAKKSNAKKKVVKFVDGNRCSKCGYLSSN 317
Query: 304 KWCKACVLLEGLNRGLPKMGI 324
CKAC+LLEGL + ++ I
Sbjct: 318 IICKACMLLEGLEKSRAQVSI 338
>gi|398025178|ref|XP_003865750.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503987|emb|CBZ39074.1| hypothetical protein, conserved [Leishmania donovani]
Length = 322
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/315 (57%), Positives = 240/315 (76%), Gaps = 3/315 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +AA+KRP+ + +CRECF+ +FE EIH I +LF G+ +A GASGGKDS
Sbjct: 7 LCAKCGAERAAVKRPRNGQLLCRECFFALFEGEIHDTIQAERLFAPGDVVACGASGGKDS 66
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL +L L++RHNYG+ + L+S+DEGI+GYRDDSL+TVKRN YGLPL I+SY+D++
Sbjct: 67 TVLIHLLDTLSKRHNYGIRIELVSVDEGIAGYRDDSLETVKRNSACYGLPLHILSYRDIF 126
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+V+GL+NNCTFCGVFRRQAL++GA L+K DKIATGHNADD+AET+L+N+LR
Sbjct: 127 GWTMDDIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRA 186
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RLSRCT + +G +PR KP KY YEKEI+ YA+FK+LDYF+TEC Y+ A+RG
Sbjct: 187 DAPRLSRCTSAVSAGEGILPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYAKEAFRGT 245
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ--GTCERCGYISSQKWCKACVLL 312
AR +KDLE LRPR+I D + SGE+ ++ +P CE+C Y++SQ+ C+ACVLL
Sbjct: 246 ARTLVKDLEALRPRSIADTVYSGEHLKVQEQEAVPASVPKPCEKCSYLTSQRLCRACVLL 305
Query: 313 EGLNRGLPKMGIVRS 327
E L RG P + R+
Sbjct: 306 ESLARGDPCAALTRT 320
>gi|254583133|ref|XP_002499298.1| ZYRO0E08558p [Zygosaccharomyces rouxii]
gi|238942872|emb|CAR31043.1| ZYRO0E08558p [Zygosaccharomyces rouxii]
Length = 370
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/333 (57%), Positives = 245/333 (73%), Gaps = 22/333 (6%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C RKA ++RPK L++IC+ CF+ VFE EIH IV N LF GE++AIGASGGK
Sbjct: 18 SQLCELCRCRKAIIRRPKNLQKICKSCFFHVFETEIHNTIVNNNLFYRGEKVAIGASGGK 77
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+VL LN R++YG++L LLSIDEGI GYRDDSL TVKRN++QYGLPL+I+SY++
Sbjct: 78 DSTVLAYVLKLLNDRYDYGIELVLLSIDEGIVGYRDDSLATVKRNQVQYGLPLEIISYRE 137
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV G++++CT+CGVFRRQALDRG+S L + + TGHNADD+AETVL+NIL
Sbjct: 138 LYDWTMDEIVACAGVRSSCTYCGVFRRQALDRGSSKLGISHVVTGHNADDMAETVLMNIL 197
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 198 RGDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAF 256
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTS----TKMPEQ---------------- 291
RG ARE +K+LE +RP I+DII SGEN + T P+Q
Sbjct: 257 RGTARELMKNLEMVRPSCIIDIIHSGENLVLKPKKPKRTGTPKQMEVRTDGSVSLGFVDG 316
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGY+SS + CKAC+LLEGL K+ +
Sbjct: 317 NKCEKCGYLSSNRICKACMLLEGLENNRAKVTL 349
>gi|339899394|ref|XP_003392838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398807|emb|CBZ09046.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 322
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/315 (57%), Positives = 239/315 (75%), Gaps = 3/315 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +AA+KRP+ + +CRECF+ +FE EIH I +LF G+ +A GASGGKDS
Sbjct: 7 LCAKCGAERAAVKRPRNGQLLCRECFFALFEGEIHDTIQAERLFAPGDVVACGASGGKDS 66
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL +L L++RHNYG+ + L+S+DEGI+GYRDDSL+TVKRN YGLPL I+SY+D++
Sbjct: 67 TVLIHLLDTLSKRHNYGIRIELVSVDEGIAGYRDDSLETVKRNSACYGLPLHILSYRDIF 126
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+V+GL+NNCTFCGVFRRQAL++GA L+K DKIATGHNADD+AET+L+N+LR
Sbjct: 127 GWTMDDIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRA 186
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RLSRCT + +G +PR KP KY YEKEI+ YA+FK+LDYF+TEC Y+ A+RG
Sbjct: 187 DAPRLSRCTSAVSAGEGILPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYAKEAFRGT 245
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ--GTCERCGYISSQKWCKACVLL 312
AR +KDLE LRPR+I D + SGE+ + +P CE+C Y++SQ+ C+ACVLL
Sbjct: 246 ARTLVKDLEALRPRSIADTVYSGEHLEVQEQEAVPASVPKPCEKCSYLTSQRLCRACVLL 305
Query: 313 EGLNRGLPKMGIVRS 327
E L RG P + R+
Sbjct: 306 ESLARGDPCAALTRT 320
>gi|157877802|ref|XP_001687200.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68130275|emb|CAJ09587.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 322
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/308 (59%), Positives = 236/308 (76%), Gaps = 3/308 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS C +AA+KRP+ + +CRECF+ +FE EIH I +LF G+ IA GASGGKDS
Sbjct: 7 LCSKCGVEQAAVKRPRNGQLLCRECFFALFEGEIHDTIQAERLFAPGDVIACGASGGKDS 66
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL +L LN+RH+YG+ + L+SIDEGI+GYRDDSL+TVKRN YGLPL I+SY+D++
Sbjct: 67 TVLIHLLDTLNKRHDYGIRIELVSIDEGIAGYRDDSLETVKRNSTCYGLPLHILSYRDIF 126
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+V+GL+NNCTFCGVFRRQAL++GA L+K DKIATGHNADD+AET+L+N+LR
Sbjct: 127 GWTMDDIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRA 186
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RLSRCT + +G +PR KP KY YEKEI+ YA+FK+LDYF+TEC Y+ +A+RG
Sbjct: 187 DAPRLSRCTSAVSAGEGILPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYAKDAFRGT 245
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACVLL 312
R +KDLE LRPR+I D + SGE+ + +P CE+C Y++SQ+ C+ACVLL
Sbjct: 246 VRTLVKDLEALRPRSIADTVYSGEHLEVQEQEALPASAPKPCEKCSYLTSQRLCRACVLL 305
Query: 313 EGLNRGLP 320
E L RG P
Sbjct: 306 ESLARGDP 313
>gi|401420964|ref|XP_003874971.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491207|emb|CBZ26472.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 322
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 238/315 (75%), Gaps = 3/315 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +AA+KRP+ + +CRECF+ VFE EIH I +LF G+ +A GASGGKDS
Sbjct: 7 LCAKCGVERAAVKRPRNGQLLCRECFFVVFEGEIHDTIQAERLFAPGDVVACGASGGKDS 66
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL +L LN+RH+YG+ + L+S+DEGI+GYRDDSL+TVKRN YGLPL I+SY D++
Sbjct: 67 TVLIHLLDTLNKRHDYGIRIELVSVDEGIAGYRDDSLETVKRNSTCYGLPLHILSYHDIF 126
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+V+GL+NNCTFCGVFRRQAL++GA L+K DKIATGHNADD+AET+L+N+LR
Sbjct: 127 GWTMDDIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRA 186
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RLSRCT + +G +PR KP KY YEKEI+ YA+FK+LDYF+TEC Y+ A+RG
Sbjct: 187 DAPRLSRCTSAVSAGEGILPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYAKEAFRGT 245
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACVLL 312
AR +KDLE LRPR+I D + SGE+ + +P CE+C Y++SQ+ C+ACVLL
Sbjct: 246 ARTLVKDLEALRPRSIADTVYSGEHLEVQEQEAVPASAPKPCEKCSYLTSQRLCRACVLL 305
Query: 313 EGLNRGLPKMGIVRS 327
E L RG P + R+
Sbjct: 306 ESLARGDPCAALRRT 320
>gi|430814564|emb|CCJ28222.1| unnamed protein product [Pneumocystis jirovecii]
Length = 330
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/312 (60%), Positives = 242/312 (77%), Gaps = 7/312 (2%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C + +LKRPKT +++C++CFY VFE E+H I+ N LF G+RI I ASGGKD
Sbjct: 14 QLCELCFLNRPSLKRPKTSQKLCKDCFYYVFETEVHNTIMSNSLFSRGDRIGICASGGKD 73
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+++ LN +++YGLDL+++SIDEGI GYRD +L+TVKR +IQY +PLKIVSY ++
Sbjct: 74 STVLAYIMKILNDKYDYGLDLYMISIDEGIRGYRDSALETVKRIQIQYSIPLKIVSYDEI 133
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGW MD IV+ IG KNNCTFCGVFRRQALDRGA++L +D I TGHNADDIAET+++N+LR
Sbjct: 134 YGWNMDRIVEHIGRKNNCTFCGVFRRQALDRGATMLNIDHIVTGHNADDIAETIIMNLLR 193
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GDIARL RCT I T + + R KPFKYTYEKEI+ YA+FK+LDYFSTE A+RG
Sbjct: 194 GDIARLGRCTEILTTGESRVKRSKPFKYTYEKEIVM-YAHFKKLDYFSTEF----EAFRG 248
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKACVL 311
AR IK+LE LRP +I+DII SGE F +S + K +P QG C++CG++SS +CKAC+L
Sbjct: 249 TARVLIKELESLRPSSIIDIIHSGEVFLLSNAAKKRLPVQGNCKKCGHMSSNDYCKACML 308
Query: 312 LEGLNRGLPKMG 323
L+GLN K+
Sbjct: 309 LQGLNSEASKLS 320
>gi|47199436|emb|CAF87748.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/310 (61%), Positives = 228/310 (73%), Gaps = 33/310 (10%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS+C ++A LKRPKT +C++CF+ FEEE+HQ IV +LFK GE + I ASGGKD
Sbjct: 4 LCSSCVDKRAVLKRPKTGHSLCKDCFFWAFEEEVHQTIVAAELFKHGETVGIAASGGKDF 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LY
Sbjct: 64 TVLAHVMKLLNERYNYGLTLMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IV+ +GLKNNCTFCGVFRRQALDRGA +LKVDKI TGHNADD+AETVL+N+LR
Sbjct: 124 GWTMDAIVRQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRA 183
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ DG +PRCKP KY YEKEI+ YAYFK
Sbjct: 184 ------------SEGDGVVPRCKPLKYAYEKEIVL-YAYFK------------------- 211
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
+ F+KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQ CK+CVLLEG
Sbjct: 212 -KTFLKDLESVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLLEG 270
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 271 LNRGLPKLGI 280
>gi|308492041|ref|XP_003108211.1| CRE-TUT-1 protein [Caenorhabditis remanei]
gi|308249059|gb|EFO93011.1| CRE-TUT-1 protein [Caenorhabditis remanei]
Length = 390
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 238/320 (74%), Gaps = 20/320 (6%)
Query: 24 AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA-------------------GERI 64
A +++ K Q+C CF + FE+++H+ IV N LFK GER+
Sbjct: 20 AKIRKAKDGSQLCGPCFSKNFEDDVHETIVNNNLFKVRKNSIQFVVSFSHCSFLQRGERV 79
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
AIGASGGKDSTVLA+V+ LN H+YGLDL LLSIDEGI GYRDDSL V++N I+Y LP
Sbjct: 80 AIGASGGKDSTVLAYVMKTLNDIHDYGLDLQLLSIDEGIKGYRDDSLLAVEKNRIEYELP 139
Query: 125 LKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
L I+SY DLYGWTMD+IV IG KNNCTFCGVFRRQALDRGA + K+ TGHNADD+A
Sbjct: 140 LTILSYNDLYGWTMDDIVAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMA 199
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
ETVL+N+LRGDIARL RCT I TGE+G +PR KP KY +E++I+ YA +L+YF TEC
Sbjct: 200 ETVLMNVLRGDIARLERCTNIVTGEEGDLPRAKPLKYCFERDIVM-YARTNQLEYFYTEC 258
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
IY+PNAYRG+AR++++DLE++ PRAILD+I+SGE + +MP TCERCGY++SQK
Sbjct: 259 IYAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQK 318
Query: 305 WCKACVLLEGLNRGLPKMGI 324
CKAC+L+EGLN G +G+
Sbjct: 319 MCKACLLIEGLNTGNTDLGV 338
>gi|255720959|ref|XP_002545414.1| VEG136 protein [Candida tropicalis MYA-3404]
gi|240135903|gb|EER35456.1| VEG136 protein [Candida tropicalis MYA-3404]
Length = 384
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 239/342 (69%), Gaps = 33/342 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ RKA +KRPK L ++C+ECFY VFE EIH I N+LF GE++AIGASGGKDS
Sbjct: 23 LCELCHSRKAVMKRPKNLMKLCKECFYNVFETEIHNTITSNKLFYPGEKVAIGASGGKDS 82
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R+NYGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 83 TVLASILKTLNERYNYGLELVLLSIDEGIVGYRDDSLATVKRNQKQYEMPLEIVSYKDLY 142
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA L + + TGHNADD+AETVL+NILRG
Sbjct: 143 NWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNILRG 202
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 203 DVARLENSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECTYAPEAFRG 261
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF------------------------------RIS 283
ARE +K LE +RP I+DII SGE+ +S
Sbjct: 262 TARELLKGLESIRPSCIMDIIYSGEHLVLAPKKPKKSTAAYKNKKKTNQEHEVNSDGSVS 321
Query: 284 TSTKMPEQG-TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ + G TCE+CGY+SS K CKAC+LL GL K+ I
Sbjct: 322 LGNNIRKDGNTCEKCGYLSSNKICKACMLLAGLEMNRAKVSI 363
>gi|150951581|ref|XP_001387923.2| conserved protein of the N-type ATP pyrophosphatase superfamily
[Scheffersomyces stipitis CBS 6054]
gi|284018076|sp|A3GGB3.2|CTU1_PICST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|149388712|gb|EAZ63900.2| conserved protein of the N-type ATP pyrophosphatase superfamily
[Scheffersomyces stipitis CBS 6054]
Length = 376
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/356 (54%), Positives = 251/356 (70%), Gaps = 36/356 (10%)
Query: 2 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
E++ K K + LC C+ RKA +KRPK L+++C++CFY+VFE EIH IV +LF G
Sbjct: 3 EISAKKVKVSA--LCELCHARKAVMKRPKNLQKLCKDCFYKVFETEIHNTIVDAKLFSPG 60
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+++AIGASGGKDSTVLA VL LN R++YGL L LLSIDEGI GYRDDSL TVKRN++QY
Sbjct: 61 DKVAIGASGGKDSTVLASVLKTLNERYDYGLILVLLSIDEGIKGYRDDSLATVKRNQVQY 120
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+PL+I+SY+DLY WTMDEIV G++++CT+CGV RRQALDRGA+ L ++ + TGHNAD
Sbjct: 121 EMPLEIISYRDLYNWTMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNAD 180
Query: 182 DIAETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+AETVL+N+LRGD ARL + C +IT PI R KPFKYTY+KEI+ YA++K+LDYF
Sbjct: 181 DMAETVLMNLLRGDTARLEKSCAIITQSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYF 239
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-------RISTSTKMPEQGT 293
STEC Y+P A+RG ARE +K LE +RP I+DII SGE+ +I+TS K ++ T
Sbjct: 240 STECTYAPEAFRGTARELLKSLESIRPSCIMDIIYSGEHLVLAPKKKKITTSYKTNKKKT 299
Query: 294 -------------------------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGY+SS + CKAC+LL GL K+ I
Sbjct: 300 HTENEVNADGSVSLGRKKQFEDGNRCEKCGYLSSNRICKACMLLAGLEMNRAKVSI 355
>gi|366998709|ref|XP_003684091.1| hypothetical protein TPHA_0A05830 [Tetrapisispora phaffii CBS 4417]
gi|357522386|emb|CCE61657.1| hypothetical protein TPHA_0A05830 [Tetrapisispora phaffii CBS 4417]
Length = 377
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/340 (56%), Positives = 247/340 (72%), Gaps = 29/340 (8%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L++IC+ CF+ VFE EIH IV N+LF GE++A+GASGGK
Sbjct: 18 SQLCELCHSRKAIIKRPKNLQKICKLCFFHVFETEIHNTIVDNKLFYRGEKVAVGASGGK 77
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN R++YG++L LLSIDEGI GYRD SL TVKRN+ QY LPL+I SY++
Sbjct: 78 DSTVLACILKLLNERYDYGIELVLLSIDEGIVGYRDHSLATVKRNQQQYNLPLEIFSYQE 137
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV+V G++N+CT+CGVFRRQALDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 138 LYNWTMDEIVEVAGIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNIL 197
Query: 193 RGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T ++TT + PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+
Sbjct: 198 RGDVARLEKSTAIMTTSKGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAF 256
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI-------------STSTKMPEQGT----- 293
RG ARE +K+LE +RP I+DII SGE + ++S KM E
Sbjct: 257 RGTARELMKNLEAIRPSCIIDIIYSGEGLVLKPKKPKRQTVVTKNSSKKMKEGNNTTSAK 316
Query: 294 ---------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE+CGY+SS K CKAC+LLEGL K+ I
Sbjct: 317 KTEFVDGNRCEKCGYLSSNKICKACMLLEGLENSRAKISI 356
>gi|241954188|ref|XP_002419815.1| uncharacterized protein YGL211W homologue, putative [Candida
dubliniensis CD36]
gi|223643156|emb|CAX42030.1| uncharacterized protein YGL211W homologue, putative [Candida
dubliniensis CD36]
Length = 384
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 241/343 (70%), Gaps = 34/343 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ RKA +KRPK L ++C+ECFY VFE EIH I+ N+LF GE+IAIGASGGKDS
Sbjct: 22 LCELCHGRKAVMKRPKNLMKLCKECFYNVFETEIHNTIISNKLFHRGEKIAIGASGGKDS 81
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R++YGL L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 82 TVLASILKTLNERYDYGLKLVLLSIDEGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLY 141
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA L ++ + TGHNADD+AETVL+N+LRG
Sbjct: 142 NWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGINHVVTGHNADDVAETVLMNLLRG 201
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 202 DVARLEHSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECTYAPEAFRG 260
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIST--------------------------STK 287
ARE +K LE +RP I+DII SGE+ ++ S
Sbjct: 261 TARELLKSLESIRPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKKKTNDEQEVNPDGSIS 320
Query: 288 MPEQG------TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ G TCE+CGY+SS K CKAC+LL+GL K+ I
Sbjct: 321 LNRNGIKKDGNTCEKCGYLSSNKICKACMLLDGLEINRAKVAI 363
>gi|47217570|emb|CAG02497.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/315 (62%), Positives = 230/315 (73%), Gaps = 29/315 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS+C ++A LKRPKT +C++CF+ FEEE+HQ IV +LFK GE + I ASGGKDS
Sbjct: 4 LCSSCVDKRAVLKRPKTGHSLCKDCFFWAFEEEVHQTIVAAELFKHGETVGIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LY
Sbjct: 64 TVLAHVMKLLNERYNYGLTLMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD IV+ +GLKNNCTFCGVFRRQALDRGA +LKVDKI TGHNADD+AETVL+N+LRG
Sbjct: 124 GWTMDAIVRQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRG 183
Query: 195 DIARL-----SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
DIARL S TG R KY YEKEI+ YAYFK
Sbjct: 184 DIARLRAVPPSPQPARATGSSRAASR---LKYAYEKEIVL-YAYFK-------------- 225
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ F+KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQ CK+C
Sbjct: 226 ------KTFLKDLESVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSC 279
Query: 310 VLLEGLNRGLPKMGI 324
VLLEGLNRGLPK+GI
Sbjct: 280 VLLEGLNRGLPKLGI 294
>gi|254571793|ref|XP_002493006.1| Protein required for thiolation of the uridine at the wobble
position of Gln, Lys, and Glu tRNAs [Komagataella
pastoris GS115]
gi|238032804|emb|CAY70827.1| Protein required for thiolation of the uridine at the wobble
position of Gln, Lys, and Glu tRNAs [Komagataella
pastoris GS115]
gi|328352982|emb|CCA39380.1| hypothetical protein PP7435_Chr3-0418 [Komagataella pastoris CBS
7435]
Length = 362
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/333 (57%), Positives = 242/333 (72%), Gaps = 25/333 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ RKA +KRPKTL+++C+ECFY VFE EIH I+ LF GER+AIGASGGKDST
Sbjct: 9 CHLCHSRKAVMKRPKTLQKLCKECFYNVFETEIHNTIISANLFHKGERVAIGASGGKDST 68
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA +L LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYK+LY
Sbjct: 69 VLAHILKTLNERYDYGLELVLLSIDEGIVGYRDDSLATVKRNKEQYQMPLEIVSYKELYS 128
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+MDEIV G++++CT+CGV RRQALDRGA+ L + + TGHNADD+AETVL+N+LRGD
Sbjct: 129 WSMDEIVACAGIRSSCTYCGVLRRQALDRGAARLGIAHVVTGHNADDMAETVLMNLLRGD 188
Query: 196 IARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL T I T G PI R KPFKYTYEKEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 189 VNRLESSTNIITQSSGSPIKRSKPFKYTYEKEIVL-YAHYKKLDYFSTECTYAPEAFRGT 247
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRI------------STSTKMPEQG---------- 292
AR +K LE ++P I+DII+SGENF++ +T+ ++ +G
Sbjct: 248 ARTLLKSLEAIKPSCIIDIIQSGENFKLKPKKQRKNVVKRNTAQEIEVRGDGSVSLNKDG 307
Query: 293 -TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CE CGY+S+ K CKAC+LL+GL K+ I
Sbjct: 308 NKCESCGYLSTNKICKACILLKGLESSRAKVPI 340
>gi|342184492|emb|CCC93974.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 320
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 241/306 (78%), Gaps = 5/306 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC+ CN+ +A LKRP + +C++CF+++FE E+H+ IV LF +G+ +A GASGGKD
Sbjct: 5 RLCNHCNEGRAVLKRPSNGKLLCKQCFFDLFEAEVHETIVNENLFVSGDVVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN RH YG+ L LLSIDEGI+GYRDDSL+TV+RN YGLPL+++SYKDL
Sbjct: 65 STVLIHLMKLLNERHGYGIQLLLLSIDEGIAGYRDDSLKTVQRNAEVYGLPLRVLSYKDL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+VK G++++CT+CGVFRRQALDRGA++L KIATGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVKSTGVRSSCTYCGVFRRQALDRGAAMLGATKIATGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RLSRCT T + +PR KPFKY YEKEI+ YA+FK+LDYF+TEC YS A+R
Sbjct: 185 GDLPRLSRCTSAITAGESLLPRVKPFKYAYEKEIVL-YAHFKQLDYFTTECTYSKEAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRI---STSTKMPEQGTCERCGYISSQKWCKACV 310
AR +K +E LRP+ ILD I++GE ++ + +T+ P +GTC +CGY++SQ +C+ACV
Sbjct: 244 EARMLLKSVEALRPQCILDTIRTGERLKVKEQNCATENP-RGTCAKCGYVTSQTFCRACV 302
Query: 311 LLEGLN 316
LL+ L+
Sbjct: 303 LLQQLS 308
>gi|358060295|dbj|GAA94049.1| hypothetical protein E5Q_00696 [Mixia osmundae IAM 14324]
Length = 343
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/337 (58%), Positives = 238/337 (70%), Gaps = 29/337 (8%)
Query: 16 CSTCNQR--------KAALKRPKTLEQICRECFYEVFEEEIHQVIV----GNQLFKAGER 63
C+ C R +A L+RPKT + +CR+CF+ FE E+H I+ G LF+AGER
Sbjct: 4 CALCMSRPERPASPSRAILRRPKTGQAVCRDCFFLAFETEVHNTILAANSGKGLFRAGER 63
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
I I ASGGKDSTVLA +++ LN R+ YGL+L+LLSIDEGISGYRDDSL+TVK N +Y L
Sbjct: 64 IGIAASGGKDSTVLAHIVTLLNERYAYGLNLYLLSIDEGISGYRDDSLETVKTNAKEYKL 123
Query: 124 PLKIVSYKDLYG-WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
PLKI+SY DLYG WTMD++VK G KNNCT+CGVFRRQALDRG S+L+VD I TGHNADD
Sbjct: 124 PLKILSYDDLYGGWTMDKVVKETGRKNNCTYCGVFRRQALDRGGSVLQVDHIVTGHNADD 183
Query: 183 IAETVLLNILRGDIARLSRCTLITTGEDGP-------------IPRCKPFKYTYEKEIMF 229
+AET+L+N+LRGDIARL RCT ITTG+D + R KPFKY YEKEI+
Sbjct: 184 MAETILMNVLRGDIARLERCTAITTGKDAHEEADGSQPALPHVVKRSKPFKYAYEKEIVM 243
Query: 230 TYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTK 287
YAYFK+L Y STECIYSP AYRG AR +KDLE +RP AILD+I SGE + +K
Sbjct: 244 -YAYFKKLTYHSTECIYSPTAYRGHARALVKDLESIRPSAILDLIYSGEAMSRIVRPDSK 302
Query: 288 MPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P Q C +C +SS C+AC LL LN GL M +
Sbjct: 303 RPTQQLCSQCSSMSSAPVCQACQLLNSLNAGLASMQL 339
>gi|296415350|ref|XP_002837353.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633217|emb|CAZ81544.1| unnamed protein product [Tuber melanosporum]
Length = 352
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 235/323 (72%), Gaps = 2/323 (0%)
Query: 12 GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
+LC +C +A + RPKT +++C+ CF FE EIH IV LF G RIAIGASGG
Sbjct: 9 ASKLCESCLSARALISRPKTHQKLCKPCFLSTFESEIHATIVSTNLFTKGSRIAIGASGG 68
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDSTVLA VL LN R++YG++ LLSIDEGI GYRDDSL+TVKRN IQYG+ L IVSY+
Sbjct: 69 KDSTVLASVLKTLNERYDYGVEFVLLSIDEGIKGYRDDSLETVKRNAIQYGMELVIVSYE 128
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+LYGW+MD +V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADDIAETVL+N+
Sbjct: 129 ELYGWSMDSVVESIGKKGNCTYCGVFRRQALDRGAERLGIHHVVTGHNADDIAETVLMNL 188
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
LRGD+ RL RC ++IT+ PI R KP KY YEKEI+ YA K+LDYFSTECIYSP A
Sbjct: 189 LRGDLPRLHRCTSIITSSTSSPIARSKPLKYAYEKEIVL-YALHKKLDYFSTECIYSPEA 247
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+RG AR IK LE++RP AILDI++SGE F ++ C RCGY++SQK CKAC
Sbjct: 248 FRGSARTLIKALEKVRPSAILDIVRSGEAFSRMIPSQAQAMSNCARCGYLTSQKLCKACT 307
Query: 311 LLEGLNRGLPKMGIVRSRGQNNE 333
LLEGLN+ PK + G +E
Sbjct: 308 LLEGLNKNRPKTIVEVEAGIEDE 330
>gi|448529331|ref|XP_003869826.1| Ncs6 protein [Candida orthopsilosis Co 90-125]
gi|380354180|emb|CCG23693.1| Ncs6 protein [Candida orthopsilosis]
Length = 361
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 239/344 (69%), Gaps = 22/344 (6%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
M V K K LC C+ RKA +KRPK L ++C+ECFY VFE EIH I N LF+
Sbjct: 1 MTVTPPKKLKVAS-LCELCHSRKAVMKRPKNLMKLCKECFYNVFETEIHNTITSNNLFQP 59
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GE++AIGASGGKDSTVLA +L LN R+NYGL L LLSIDEGI GYRDDSL TVKRN+ Q
Sbjct: 60 GEKVAIGASGGKDSTVLASILKTLNERYNYGLTLVLLSIDEGIKGYRDDSLATVKRNQQQ 119
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
Y + L+IVSYKDLY WTMDE+V G++++CT+CGV RRQALDRGA+ L + + TGHNA
Sbjct: 120 YEMELEIVSYKDLYNWTMDEVVGCAGIRSSCTYCGVLRRQALDRGAAKLGISHVVTGHNA 179
Query: 181 DDIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
DD+AETVL+N+LRGD RL T ++T + PI R KPFKYTY+KEI+ YA++K+LDY
Sbjct: 180 DDMAETVLMNLLRGDANRLEGSTRIMTQSAESPIKRSKPFKYTYQKEIVL-YAHYKKLDY 238
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS--------TSTKMPEQ 291
FSTEC Y+P A+RG ARE +K LE +RP I+DII SGE+ +S K E+
Sbjct: 239 FSTECSYAPEAFRGTARELLKGLESIRPSCIMDIIYSGEHLVLSKKKKQTAKYKNKKAEE 298
Query: 292 -----------GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
C +CGY+SS K CKAC LL+GL PK+ +
Sbjct: 299 VEVNSDGSVSTNRCIKCGYLSSNKICKACTLLQGLEMSRPKLAV 342
>gi|354547563|emb|CCE44298.1| hypothetical protein CPAR2_401000 [Candida parapsilosis]
Length = 362
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 240/345 (69%), Gaps = 23/345 (6%)
Query: 1 MEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA 60
M V K K LC C+ RKA +KRPK L ++C+ECFY VFE EIH I NQLF
Sbjct: 1 MTVMPPKKLKVAS-LCELCHSRKAVMKRPKNLMKLCKECFYNVFETEIHNTITSNQLFHP 59
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
GE++AIGASGGKDSTVLA +L LN R++YGL L LLSIDEGI GYRDDSL TVKRN+ Q
Sbjct: 60 GEKVAIGASGGKDSTVLASILKTLNERYSYGLTLVLLSIDEGIKGYRDDSLATVKRNQQQ 119
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
Y + L+I+SYKDLY WTMDE+V G++++CT+CGV RRQALDRGA+ L ++ + TGHNA
Sbjct: 120 YEMELEIISYKDLYNWTMDEVVGCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNA 179
Query: 181 DDIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
DD+AETVL+N+LRGD RL T ++T D PI R KPFKYTY+KEI+ YA++K+LDY
Sbjct: 180 DDMAETVLMNLLRGDANRLEGSTRIMTQSADSPIKRSKPFKYTYQKEIVL-YAHYKKLDY 238
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS---------TSTKMPE 290
FSTEC Y+P A+RG ARE +K LE +RP I+DII SGE+ +S K E
Sbjct: 239 FSTECSYAPEAFRGTARELLKGLESIRPSCIMDIIYSGEHLVLSKKKKKQTVKYKNKKAE 298
Query: 291 Q-----------GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ C RCGY+SS + CKAC LL+GL PK+ +
Sbjct: 299 EIEVNPDGSVSTNRCIRCGYLSSNEICKACTLLQGLEMSRPKLAV 343
>gi|403214004|emb|CCK68505.1| hypothetical protein KNAG_0B00570 [Kazachstania naganishii CBS
8797]
Length = 375
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/338 (55%), Positives = 243/338 (71%), Gaps = 27/338 (7%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA LKRPK L+++C+ECF++VFE EIH IV N+LF GE+IA+GASGGK
Sbjct: 18 AQLCDLCHCRKAVLKRPKNLQKLCKECFFDVFETEIHNTIVDNKLFHRGEKIAVGASGGK 77
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA ++ LN +++YG+ ++LLSIDEGI GYRDDSL TV+RN+ QYGLPL+I S+KD
Sbjct: 78 DSTVLAHMMKFLNDKYDYGIQIYLLSIDEGIVGYRDDSLATVQRNQKQYGLPLEIFSFKD 137
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LYGWTMDEIV V G++N+CT+CGV RRQ+LDRGA L + + TGHNADD+AETVL+NIL
Sbjct: 138 LYGWTMDEIVSVAGIRNSCTYCGVLRRQSLDRGAQKLGIQHVVTGHNADDMAETVLMNIL 197
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY Y+KEI+ YA++++LDYFSTEC Y+P A+
Sbjct: 198 RGDVARLEKSTSILTSSKGSPIKRSKPFKYCYQKEIVL-YAHYRKLDYFSTECTYAPEAF 256
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM----------------------- 288
RG ARE +K+LE +RP I+DII SGEN + +
Sbjct: 257 RGTARELMKNLEVVRPSCIIDIIHSGENLFLKPAAGGRRQGRRRGPGTTSANTTSTTTST 316
Query: 289 -PEQGT-CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P G+ CERC Y+S + CKAC+LLE L++ + I
Sbjct: 317 GPVDGSRCERCNYLSRNRICKACMLLEDLDKNRAAVTI 354
>gi|294659301|ref|XP_002770568.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
gi|226711415|sp|B5RV24.1|CTU1_DEBHA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|199433857|emb|CAR65903.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
Length = 377
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/342 (54%), Positives = 239/342 (69%), Gaps = 33/342 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC CN RKA +KRPK L+++C+ECFY VFE EIH I LF+ G+++AIGASGGKDS
Sbjct: 16 LCELCNGRKAVMKRPKNLQKLCKECFYNVFETEIHNTIADANLFQPGDKVAIGASGGKDS 75
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++Y L+L LLSIDEGI GYRDDSL TVKRN+ QY + L+I+SYKDLY
Sbjct: 76 TVLASVLKTLNERYDYRLELVLLSIDEGIKGYRDDSLATVKRNQAQYNMALEIISYKDLY 135
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA+ L ++ + TGHNADD+AETVL+N+LRG
Sbjct: 136 NWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRG 195
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D ARL + CT++T PI R KPFKY+Y+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 196 DTARLEKSCTILTQSTGSPIKRSKPFKYSYQKEIVL-YAHYKKLDYFSTECSYAPEAFRG 254
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---------------------- 291
ARE +K LE +RP I+DII SGE+ ++ K +Q
Sbjct: 255 TARELLKSLEAIRPSCIMDIIYSGEHLALAPKKKRTQQYKNKKKTQVDNEHEINADGSIT 314
Query: 292 -GT--------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
GT CE CGY++S K CKACVLL GL K+ +
Sbjct: 315 IGTREFKDGNRCENCGYLTSNKICKACVLLAGLEMNRAKVSV 356
>gi|154346638|ref|XP_001569256.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066598|emb|CAM44396.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 322
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 232/306 (75%), Gaps = 3/306 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +AA+KRP+ + +CRECF+ +FE EIH I +LF G+ +A GASGGKDS
Sbjct: 7 LCTKCGVERAAVKRPRNGQLLCRECFFALFEAEIHDTIQSERLFVPGDVVACGASGGKDS 66
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL +L LN++H YG+ + L+S+DEGI GYRDDSL+TVKRN YGLPL I+SY++++
Sbjct: 67 TVLIHLLDTLNKQHRYGIHIELVSVDEGIVGYRDDSLETVKRNSACYGLPLHILSYRNIF 126
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD+IV+V+GL+NNCTFCGVFRRQAL++GA+L+K DKIATGHNADD+AET+L+N+LR
Sbjct: 127 GWTMDDIVRVVGLRNNCTFCGVFRRQALEKGAALVKADKIATGHNADDMAETILMNVLRA 186
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RLSRCT +G +PR KP KY YEKEI+ YA+FK+LDYF+TEC Y+ A+RG
Sbjct: 187 DAPRLSRCTSAVAAGEGILPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYAKEAFRGA 245
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACVLL 312
AR +KDLE LRPR+I D + SGE+ + +P CE+C Y +SQ+ C+ACVLL
Sbjct: 246 ARTLMKDLEALRPRSIADTVYSGEHLEVQALEAVPASPPKPCEKCSYRTSQRLCRACVLL 305
Query: 313 EGLNRG 318
E L RG
Sbjct: 306 ESLARG 311
>gi|238881677|gb|EEQ45315.1| VEG136 protein [Candida albicans WO-1]
Length = 389
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/349 (54%), Positives = 238/349 (68%), Gaps = 40/349 (11%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ RKA +KRPK L ++C+ECFY +FE EIH I+ N LF GE+I IGASGGKDS
Sbjct: 21 LCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNNLFYRGEKIVIGASGGKDS 80
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 81 TVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLY 140
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA L + + TGHNADD+AETVL+N+LRG
Sbjct: 141 NWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNLLRG 200
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 201 DVARLESSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECTYAPEAFRG 259
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIST----------------------------- 284
ARE +K LE +RP I+DII SGE+ ++
Sbjct: 260 TARELLKSLESIRPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKNKNKKKSNSEQEQEVN 319
Query: 285 ---STKMPEQG------TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
S + G TCE+CGY+SS K CKAC+LL GL K+ I
Sbjct: 320 PDGSISLNRNGIKKDGNTCEKCGYLSSNKICKACMLLNGLEINRAKVTI 368
>gi|68466155|ref|XP_722852.1| hypothetical protein CaO19.12104 [Candida albicans SC5314]
gi|68466448|ref|XP_722706.1| hypothetical protein CaO19.4634 [Candida albicans SC5314]
gi|74587732|sp|Q5AML2.1|CTU1_CANAL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46444696|gb|EAL03969.1| hypothetical protein CaO19.4634 [Candida albicans SC5314]
gi|46444852|gb|EAL04124.1| hypothetical protein CaO19.12104 [Candida albicans SC5314]
Length = 395
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 240/355 (67%), Gaps = 46/355 (12%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ RKA +KRPK L ++C+ECFY +FE EIH I+ N LF GE+IAIGASGGKDS
Sbjct: 21 LCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNDLFYRGEKIAIGASGGKDS 80
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 81 TVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLY 140
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
W+MDEIV G++++CT+CGV RRQALDRGA L + + TGHNADD+AETVL+N+LRG
Sbjct: 141 NWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNLLRG 200
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARL T ++TT PI R KPFKYTY+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 201 DVARLESSTNIMTTSAGSPIKRSKPFKYTYQKEIVL-YAHYKKLDYFSTECTYAPEAFRG 259
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRIST----------------------------- 284
ARE +K LE +RP I+DII SGE+ ++
Sbjct: 260 TARELLKSLESIRPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKNKNKKKSNSEQEEQEK 319
Query: 285 ---------STKMPEQG------TCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
S + + G TCE+CGY+SS K CKAC+LL GL K+ I
Sbjct: 320 QEQEVNPDGSISLNQNGIKKDGNTCEKCGYLSSNKICKACMLLNGLEINRAKVTI 374
>gi|344230521|gb|EGV62406.1| N-type ATP pyrophosphatase [Candida tenuis ATCC 10573]
Length = 375
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 245/355 (69%), Gaps = 32/355 (9%)
Query: 1 MEVAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFK 59
M V + K KK +LC C+ RKA +KRPK L+++C+ECF+ VFE EIH I +LF
Sbjct: 1 MTVEQKKDKKLKVTQLCELCHGRKAVMKRPKNLQKLCKECFFLVFETEIHNTITDAKLFY 60
Query: 60 AGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEI 119
GE +A+GASGGKDSTVLA V+ LN R++YGL L LLSIDEGI GYRDDSL TVKRN+
Sbjct: 61 KGETVALGASGGKDSTVLASVMKTLNERYDYGLHLVLLSIDEGIKGYRDDSLATVKRNQA 120
Query: 120 QYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
QY +PL+IVSYK+LY WTMDEIV G++N+CT+CGV RRQALDRGA+ L ++ + TGHN
Sbjct: 121 QYEMPLEIVSYKELYDWTMDEIVACSGMRNSCTYCGVLRRQALDRGAAKLGINHVLTGHN 180
Query: 180 ADDIAETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLD 238
ADD+AETVL+N+LRGD RL + CT+ T D PI R KPFKYTY+KEI+ YA++K+LD
Sbjct: 181 ADDMAETVLMNVLRGDSKRLDKSCTIKTESADSPIKRSKPFKYTYQKEIVL-YAHYKKLD 239
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI----------STSTKM 288
YFSTEC Y+P ++RG RE +K LE +RP I+D+I SGE+F + + K+
Sbjct: 240 YFSTECTYAPESFRGTTRELLKALESIRPSCIMDLIYSGEHFELRKKQVTTTYKNNKKKL 299
Query: 289 PEQGT-------------------CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
PEQ C++CGY+SS K CKAC LL GL K+ +
Sbjct: 300 PEQEVNPDGSVSLKKTPAPGEARKCDKCGYLSSNKICKACFLLGGLEANRAKVTL 354
>gi|320580621|gb|EFW94843.1| ATPase, putative [Ogataea parapolymorpha DL-1]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 237/336 (70%), Gaps = 26/336 (7%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C KA ++RPK L+++C+EC++ VFE EIH I +LF GE++AIGASGGKDS
Sbjct: 8 LCQRCEANKAVMRRPKNLQKLCKECYFHVFETEIHLTIEKEKLFYPGEKVAIGASGGKDS 67
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA +L LN R+NYG+ L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY
Sbjct: 68 TVLASILKTLNERYNYGVHLVLLSIDEGIVGYRDDSLATVKRNQQQYEMPLEIVSYKDLY 127
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
WTMDEIV G+K++CT+CGV RRQALDRGA L ++ + TGHNADD+AETVL+N+LRG
Sbjct: 128 NWTMDEIVSCSGVKSSCTYCGVLRRQALDRGAMKLGINHVVTGHNADDMAETVLMNLLRG 187
Query: 195 DIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D ARL T ITT G PI R KPFKY Y+KEI+ YA++K+LDYFSTEC Y+P A+RG
Sbjct: 188 DTARLESSTNITTKSTGSPIKRSKPFKYCYQKEIVL-YAHYKKLDYFSTECTYAPEAFRG 246
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP--------EQGT------------ 293
AR +K+LE +RP ILDII SGE+F++ K P Q T
Sbjct: 247 TARVLMKNLESVRPSCILDIIYSGEHFKLKQRKKRPGPKKPVTESQETEIRSDGSVSLRN 306
Query: 294 ----CERCGYISSQKWCKACVLLEGLNRGLPKMGIV 325
CE+CGY+S+ K CKAC+LL+GL K+ I
Sbjct: 307 NGNRCEKCGYLSTNKICKACILLQGLELSRAKLNIA 342
>gi|71748080|ref|XP_823095.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832763|gb|EAN78267.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 336
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/314 (57%), Positives = 236/314 (75%), Gaps = 5/314 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R CS C + KA LKRP+ + +C+ CF+ +FE E+H+ I+ +LFK G+ +A GASGGKD
Sbjct: 5 RQCSHCEKEKAVLKRPRNGKLLCQRCFFNLFEAEVHETIMKEKLFKPGDIVACGASGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN +H YG+ L LLSIDEGI+GYRDDSL+TV RN Y LPL+++SYK+L
Sbjct: 65 STVLIHLMKLLNEQHEYGIQLLLLSIDEGIAGYRDDSLKTVHRNAEVYNLPLRVLSYKEL 124
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+VKV GL+++CT+CGVFRRQALDRGA++L K+ TGHNADD+AET+L+NILR
Sbjct: 125 YGWTMDEVVKVTGLRSSCTYCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILMNILR 184
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RLSRCT T + +PR KP KY YEKEI+ YA+FK+LDYF+TEC YS A+R
Sbjct: 185 GDLPRLSRCTSAITSGESLLPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYSKEAFRS 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRI---STSTKMPEQGTCERCGYISSQKWCKACV 310
AR +K++E L+PR ILD I++GE R+ +T+ P C RCGY++SQ C+ACV
Sbjct: 244 EARTLLKNIEILQPRCILDTIRTGEQLRVKEQECATENPPSA-CTRCGYVTSQSLCRACV 302
Query: 311 LLEGLNRGLPKMGI 324
LL+GLN P + +
Sbjct: 303 LLQGLNMNGPAVCV 316
>gi|170588925|ref|XP_001899224.1| n-type ATP pyrophosphatase-like [Brugia malayi]
gi|158593437|gb|EDP32032.1| n-type ATP pyrophosphatase-like, putative [Brugia malayi]
Length = 348
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 244/345 (70%), Gaps = 7/345 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN A++KR K + C CF + FE E+H VI LF G++IAIGASGGKDST
Sbjct: 4 CWQCNA-SASVKRSKDGKYACVVCFTDAFEAEVHNVIKSYGLFGKGKKIAIGASGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL VL++LN++H+YGLD+ LLS+DEGI+GYR DSL+ V+RN YGLPL ++SYK LYG
Sbjct: 63 VLIHVLNKLNQKHDYGLDIILLSVDEGIAGYRGDSLKAVERNRNDYGLPLVVMSYKQLYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV +G +NNCTFCGVFRR+ALDRGA IATGHNADD+AETVLLN+LRGD
Sbjct: 123 WTMDEIVSAVGARNNCTFCGVFRRRALDRGAIECGAHIIATGHNADDMAETVLLNVLRGD 182
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ARL RCT I TG +G +PR KP KY +EK+I+ YA+F RLDYFSTEC Y+P+++R +
Sbjct: 183 LARLQRCTEIVTGLEGCLPRTKPLKYVFEKDIVM-YAHFNRLDYFSTECRYAPDSFRNYV 241
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R +++ LERL+P+AILD+I+SGE + +P TCERCG +SSQK CKAC+LL GL
Sbjct: 242 RMYVRKLERLQPKAILDLIRSGETISARSDVSLPALTTCERCGCMSSQKHCKACLLLHGL 301
Query: 316 -----NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTL 355
+ G+ K + NN R D K+ K N C ++
Sbjct: 302 FTNDYSLGIKKTYVDERLASNNFRLLDGKRIKTLYNFLHNLCYSI 346
>gi|313221651|emb|CBY36134.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 237/327 (72%), Gaps = 3/327 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC CN+R A + R +CRECF +FEEE+H I +LFK+G+++AIGASGGKD
Sbjct: 4 KLCERCNERAACVLRYDR-SILCRECFCRIFEEEVHNTITKYKLFKSGQKVAIGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S VL V+ LN R++YGL L LLSIDEGISGYRD SL+ VK + YGL LKI+SYKDL
Sbjct: 63 SAVLMQVMKILNERYDYGLKLCLLSIDEGISGYRDHSLEEVKFHSNNYGLELKILSYKDL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y W+MDEIV V G K+NCTFCGVFRRQALDRGA L VD +ATGHN DD+AETVL+N+LR
Sbjct: 123 YNWSMDEIVSVAGRKSNCTFCGVFRRQALDRGAWQLGVDIVATGHNGDDVAETVLMNMLR 182
Query: 194 GDIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ RLSRCT I+T +D IPR KP KY YE EI+ YA ++ YFSTEC Y+P A+R
Sbjct: 183 GDVGRLSRCTAISTADDPSGIPRVKPLKYQYEAEIV-KYARHSKVRYFSTECTYAPGAHR 241
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
G RE+++ ++RP +LDIIK+GE F + KMP + C RC YISSQ CKAC+LL
Sbjct: 242 GQIREYLRAATKIRPHVVLDIIKAGEGFEVKDGIKMPIKTRCTRCDYISSQPVCKACLLL 301
Query: 313 EGLNRGLPKMGIVRSRGQNNERTKDMK 339
EGLN G P +GI +++ ++ K +K
Sbjct: 302 EGLNSGRPLLGIGKTKAGRVKKYKTVK 328
>gi|313227291|emb|CBY22437.1| unnamed protein product [Oikopleura dioica]
Length = 388
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 239/328 (72%), Gaps = 5/328 (1%)
Query: 14 RLCSTCNQRKA-ALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC CN+R A L+ +++ +CRECF +FEEE+H I +LFK G+++AIGASGGK
Sbjct: 4 KLCERCNERAACVLRYDRSI--LCRECFCRIFEEEVHNTITKYKLFKRGQKVAIGASGGK 61
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS VL V+ LN R++YGL L LLSIDEGISGYRD SL+ VK + YGL LKI+SYKD
Sbjct: 62 DSAVLMQVMKILNERYDYGLKLCLLSIDEGISGYRDHSLEEVKFHSNNYGLELKILSYKD 121
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY W+MDEIV V G K+NCTFCGVFRRQALDRGA L VD +ATGHN DD+AETVL+N+L
Sbjct: 122 LYNWSMDEIVSVAGRKSNCTFCGVFRRQALDRGAWQLGVDIVATGHNGDDVAETVLMNML 181
Query: 193 RGDIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ RLSRCT ITT +D IPR KP KY YE EI+ YA ++ YFSTEC Y+P A+
Sbjct: 182 RGDVGRLSRCTAITTADDPSGIPRVKPLKYQYEAEIV-KYARHSKVRYFSTECTYAPGAH 240
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG RE+++ ++RP +LDIIK+GE F + KMP + C RC YISSQ CKAC+L
Sbjct: 241 RGQIREYLRAATKIRPHVVLDIIKAGEGFEVKDGIKMPIKTRCTRCDYISSQPVCKACLL 300
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDMK 339
LEGLN G P +GI +++ ++ K +K
Sbjct: 301 LEGLNSGRPLLGIGKTKAGRVKKYKTVK 328
>gi|400600268|gb|EJP67942.1| hypothetical protein BBA_02838 [Beauveria bassiana ARSEF 2860]
Length = 391
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/281 (62%), Positives = 217/281 (77%), Gaps = 2/281 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN +KA +KRPK ++C+ECF VFE+E+H I+ ++LF GE++AIGASGGKDST
Sbjct: 6 CVRCNSQKAVVKRPKNHHKLCKECFLTVFEDEVHHTIISSKLFLRGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHNYGLDL LLS+DEGI GYRDDSL+TVKRN +QY +PL+IV Y LYG
Sbjct: 66 VLASVLKTLNERHNYGLDLVLLSVDEGIKGYRDDSLETVKRNAVQYEMPLQIVGYDTLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA +L++ + TGHNADDIAETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLEIKHVVTGHNADDIAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
++RLSR T I TG + R KP KY YEKEI+ YAY K+LDYFSTECIYSP A+RG
Sbjct: 186 LSRLSRSTSIVTGNSSNDVKRSKPLKYAYEKEIVL-YAYHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
AR IK+LE++RP AILDI++SGE+ T K C+
Sbjct: 245 ARSLIKNLEKVRPSAILDIVRSGEDLARLTPDKSQAACACD 285
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 281 RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
R T ++ GTC RCGY+SSQ C+AC L+E LN+ + I
Sbjct: 348 REPTPGQLQTLGTCIRCGYMSSQDICQACTLVERLNKNRADIAI 391
>gi|261332966|emb|CBH15961.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 462
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/314 (56%), Positives = 235/314 (74%), Gaps = 5/314 (1%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R CS C + KA LKRP+ + +C+ CF+ +FE E+H+ I+ +LFK G+ +A GASGGKD
Sbjct: 131 RQCSHCEKEKAVLKRPRNGKLLCQRCFFNLFEAEVHETIMKEKLFKPGDIVACGASGGKD 190
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVL ++ LN +H YG+ L LLSIDEGI+GYRDDSL+TV RN Y L L+++SYK+L
Sbjct: 191 STVLIHLMKLLNEQHEYGIQLLLLSIDEGIAGYRDDSLKTVHRNAEVYNLSLRVLSYKEL 250
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YGWTMDE+VKV GL+++CT+CGVFRRQALDRGA++L K+ TGHNADD+AET+L+NILR
Sbjct: 251 YGWTMDEVVKVTGLRSSCTYCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILMNILR 310
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ RLSRCT T + +PR KP KY YEKEI+ YA+FK+LDYF+TEC YS A+R
Sbjct: 311 GDLPRLSRCTSAITSGESLLPRVKPLKYAYEKEIVL-YAHFKKLDYFTTECTYSKEAFRS 369
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRI---STSTKMPEQGTCERCGYISSQKWCKACV 310
AR +K++E L+PR ILD I++GE R+ +T+ P C RCGY++SQ C+ACV
Sbjct: 370 EARTLLKNIEILQPRCILDTIRTGEQLRVKEQECATENPPSA-CTRCGYVTSQSLCRACV 428
Query: 311 LLEGLNRGLPKMGI 324
LL+GLN P + +
Sbjct: 429 LLQGLNMNGPAVCV 442
>gi|1655726|gb|AAC49498.1| unknown [Saccharomyces cerevisiae]
Length = 317
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 229/299 (76%), Gaps = 10/299 (3%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GE++A+GASGGKD
Sbjct: 20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKD 79
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDL
Sbjct: 80 STVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDL 139
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILR
Sbjct: 140 YDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILR 199
Query: 194 GDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+R
Sbjct: 200 GDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFR 258
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQ 303
G ARE++K+LE +RP I+DII+SGEN + K + C RCGY+SS+
Sbjct: 259 GTAREYMKNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSK 317
>gi|340939150|gb|EGS19772.1| hypothetical protein CTHT_0042560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 398
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 215/266 (80%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C +A +KRPK ++C+ CF +VFE+E+H IV ++LF GE++AIGASGGKDST
Sbjct: 6 CSKCKTERAIIKRPKNHAKLCKACFIQVFEDEVHHTIVSSKLFYPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHNYGL L LLSIDEGI GYRDDSL+TVKRN +QY +PLKIVSY++LYG
Sbjct: 66 VLASVLKTLNERHNYGLKLVLLSIDEGIKGYRDDSLETVKRNSVQYDMPLKIVSYEELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG KNNCT+CGVFRRQALDRGA +L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKNNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ARL+R T I TG+ + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LARLARSTSIVTGDSRSDVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK LE++RP AILDI++SGE+
Sbjct: 245 ARGLIKQLEKVRPSAILDIVRSGEDM 270
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ C+AC+LLEGLN+ ++ I
Sbjct: 365 GNCKRCGYMSSQDICQACMLLEGLNKNRAQIQI 397
>gi|116202123|ref|XP_001226873.1| hypothetical protein CHGG_08946 [Chaetomium globosum CBS 148.51]
gi|88177464|gb|EAQ84932.1| hypothetical protein CHGG_08946 [Chaetomium globosum CBS 148.51]
Length = 402
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/282 (61%), Positives = 215/282 (76%), Gaps = 2/282 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A +KRPK ++C+ CF +FE+E+H I +QLF+ GE++AIGASGGKDS
Sbjct: 5 LCVNCKTERALIKRPKNHAKLCKVCFITIFEDEVHHTITSSQLFQPGEKVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH YGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL +V Y +LY
Sbjct: 65 TVLASVLKTLNERHEYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARLSR T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLARLSRSTSIVTGDDRSEVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
AR IK LER+RP AILDI++SGE+ + P C+
Sbjct: 244 SARSLIKQLERVRPTAILDIVRSGEDMARLVPGESPSSCACK 285
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 284 TSTKMPEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
TS P Q G C RCGY+SSQ C+AC+LLEGLN+ ++ I
Sbjct: 360 TSKSAPRQVRGNCSRCGYMSSQDICQACILLEGLNKNRAQIQI 402
>gi|302405961|ref|XP_003000817.1| ATP-binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261360774|gb|EEY23202.1| ATP-binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 399
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 214/267 (80%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ CN +A +KRPK ++IC+ CF VFE+E+H I+ ++LF G+R+AIGASGGKDS
Sbjct: 5 MCARCNTDRAVVKRPKNHQKICKACFISVFEDEVHHTILSSKLFSRGDRVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH+YGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL +V Y +LY
Sbjct: 65 TVLASVLKTLNERHDYGLDLILLSIDEGIKGYRDDSLETVKRNAIQYDMPLTVVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRG+ +L + + TGHNADDIAET+L+N+LRG
Sbjct: 125 GWTMDQVVGTVGKKGNCTYCGVFRRQALDRGSKMLGIRHLVTGHNADDIAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRSTSIMTGDDSSDVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILDI++SGE+
Sbjct: 244 TARSLIKNLERVRPSAILDIVRSGEDM 270
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 31/41 (75%)
Query: 284 TSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
T +++ G C+RCGY++SQ +C+AC+L++ LN+ P++ I
Sbjct: 356 TMSELQVLGKCKRCGYMTSQAYCQACLLVDSLNKNRPRLEI 396
>gi|346972849|gb|EGY16301.1| ATP-binding domain-containing protein [Verticillium dahliae
VdLs.17]
Length = 399
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/278 (62%), Positives = 218/278 (78%), Gaps = 4/278 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ CN +A +KRPK ++IC+ CF VFE+E+H I+ ++LF G+R+AIGASGGKDS
Sbjct: 5 ICARCNTDRAVVKRPKNHQKICKACFISVFEDEVHHTILSSKLFSRGDRVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH+YGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL +V Y +LY
Sbjct: 65 TVLASVLKTLNERHDYGLDLILLSIDEGIKGYRDDSLETVKRNAIQYDMPLTVVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRG+ +L + + TGHNADDIAET+L+N+LRG
Sbjct: 125 GWTMDQVVGTVGKKGNCTYCGVFRRQALDRGSKMLGIRHLVTGHNADDIAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRSTSIMTGDDSSDVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMP 289
AR IK+LER+RP AILDI++SGE+ + ST P
Sbjct: 244 TARSLIKNLERVRPSAILDIVRSGEDMARLVPGSTSNP 281
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 284 TSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
T +++ G C+RCGY++SQ C+AC+L++ LN+ P++ I
Sbjct: 356 TMSELQVLGKCKRCGYMTSQAHCQACLLVDSLNKNRPRLEI 396
>gi|367040517|ref|XP_003650639.1| hypothetical protein THITE_2110311 [Thielavia terrestris NRRL 8126]
gi|346997900|gb|AEO64303.1| hypothetical protein THITE_2110311 [Thielavia terrestris NRRL 8126]
Length = 402
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 213/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK ++C+ CF ++FE+E+H I +QLF GE++AIGASGGKDS
Sbjct: 5 LCANCKTERALIKRPKNHAKLCKGCFIKLFEDEVHHTITSSQLFYPGEKVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH YGL+L LLSIDEGI GYRDDSL+TVKRN +QYG+PLK+V Y +LY
Sbjct: 65 TVLASVLKTLNERHGYGLELVLLSIDEGIKGYRDDSLETVKRNAVQYGMPLKVVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWTMDQVVEAIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARLSR T I TG+ + R KP KY YEKEI+ YA++K+LDYFSTECIYSP A+RG
Sbjct: 185 DLARLSRSTSIVTGDSRSEVKRSKPLKYAYEKEIVL-YAHYKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR +K LER+RP AILDI++SGE+
Sbjct: 244 SARGLVKQLERIRPTAILDIVRSGEDM 270
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
C+RCGY+SSQ+ C+AC+LLEGLN+ ++ I
Sbjct: 372 CKRCGYMSSQEICQACMLLEGLNKNRAQIQI 402
>gi|85096263|ref|XP_960229.1| VEG136 protein [Neurospora crassa OR74A]
gi|28921712|gb|EAA30993.1| VEG136 protein [Neurospora crassa OR74A]
gi|39979201|emb|CAE85572.1| conserved hypothetical protein [Neurospora crassa]
Length = 403
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK ++C+ CF +FEEE+H IV + LF GER+AIGASGGKDS
Sbjct: 5 LCAICKTERANIKRPKNHARVCKGCFLTLFEEEVHHTIVSSNLFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LY
Sbjct: 65 TVLASVLKTLNERYNYGLELVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG+D + R KP KY YEKEI+ YAY K+LDYFSTECIYSP A+RG
Sbjct: 185 DMGRLARSTNIVTGDDSSDVKRSKPLKYAYEKEIVM-YAYHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILDI++SGE+
Sbjct: 244 TARALIKQLERIRPSAILDILRSGEDM 270
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ+ C+AC+LLEGLN+ ++ I
Sbjct: 371 GNCKRCGYMSSQEVCQACMLLEGLNKNRAQIQI 403
>gi|312065342|ref|XP_003135744.1| tRNA 2-thiolation protein 1 [Loa loa]
gi|307769103|gb|EFO28337.1| tRNA 2-thiolation protein 1 [Loa loa]
Length = 321
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/309 (58%), Positives = 234/309 (75%), Gaps = 2/309 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ A++KR K + C CF + FE E+H+VI LF G+++A+GASGGKDST
Sbjct: 4 CWQCDA-SASVKRSKDGKPACVVCFTDAFEAEVHEVIKTYGLFGKGKKVAVGASGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL VL++LN++++YGLD+ LLSIDEGI+GYRDDSL+ V+RN +YGLPL I+SYK LYG
Sbjct: 63 VLIHVLNKLNQKYDYGLDIILLSIDEGITGYRDDSLKAVERNRNEYGLPLIIMSYKQLYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV +G++NNCTFCGVFRR+ALDRGA + IATGHNADD+AETVLLN+LRGD
Sbjct: 123 WTMDEIVSAVGVRNNCTFCGVFRRRALDRGAVECGANIIATGHNADDMAETVLLNVLRGD 182
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ARL RCT I T +G +PR KP KY +EK+I+ YA+F LDYFSTEC Y+P+++R +
Sbjct: 183 LARLQRCTDIVTELEGCLPRTKPLKYVFEKDIVM-YAHFNGLDYFSTECRYAPDSFRNYV 241
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R ++K LERL+P+AILD+IKSGE + +P CERCG +SSQK CKAC+LL+GL
Sbjct: 242 RMYVKKLERLQPKAILDLIKSGEAISARSDVSLPRPTKCERCGCMSSQKLCKACLLLQGL 301
Query: 316 NRGLPKMGI 324
+G+
Sbjct: 302 FTNDHSLGV 310
>gi|390353294|ref|XP_003728080.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Strongylocentrotus purpuratus]
Length = 322
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/292 (62%), Positives = 209/292 (71%), Gaps = 38/292 (13%)
Query: 33 EQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGL 92
+ +C+ECFY FE EIH IV +LF GER+A+GASGGK S
Sbjct: 5 DALCKECFYAAFESEIHHTIVTGKLFTRGERVAVGASGGKGS------------------ 46
Query: 93 DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 152
TVKRN+ QY LPLKIVSY++LYGWTMD IVK IG KNNCT
Sbjct: 47 -------------------HTVKRNQQQYDLPLKIVSYEELYGWTMDSIVKQIGRKNNCT 87
Query: 153 FCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP 212
FCGVFRRQALDRGA L+ KI TGHNADDIAET+L+NILRGDIARL RC I TG +G
Sbjct: 88 FCGVFRRQALDRGALLVNAGKIVTGHNADDIAETILMNILRGDIARLRRCADIITGAEGA 147
Query: 213 IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILD 272
+PRCKPFKYTYEKEI+ YAYFK+LDYFSTECIYSPNAYRG+AR ++KDLE++R +I+D
Sbjct: 148 LPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGYARAYLKDLEKIRSTSIID 206
Query: 273 IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
II SGE+ I KMP QGTC RC YISSQ CKAC LLEGLN+GLPK+GI
Sbjct: 207 IIHSGESLSIKKDVKMPTQGTCSRCAYISSQPVCKACTLLEGLNKGLPKLGI 258
>gi|346323504|gb|EGX93102.1| VEG136 protein [Cordyceps militaris CM01]
Length = 391
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/282 (62%), Positives = 219/282 (77%), Gaps = 2/282 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C+ +KA +KRPK ++C+ECF VFE+E+H I+ ++LF GE+IAIGASGGKDS
Sbjct: 5 LCMRCSAQKAVVKRPKNHHKLCKECFLAVFEDEVHHTIISSKLFLRGEKIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN++H+YGL+L LLS+DEGI GYRDDSL+TVKRN +QY +PL+IV Y LY
Sbjct: 65 TVLASVLKTLNKKHDYGLELVLLSVDEGIKGYRDDSLETVKRNAVQYEMPLQIVGYDTLY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA LL++ + TGHNADDIAETVL+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKLLEIKHVVTGHNADDIAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D++RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLSRLSRSTSIITGNSSNDVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
AR IK+LE++RP AILDI++SGE+ T K C+
Sbjct: 244 TARSLIKNLEKVRPSAILDIVRSGEDLARLTPDKGQAACACD 285
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
GTC RCGY+SSQ+ C+AC L+E LN+ + I
Sbjct: 359 GTCTRCGYMSSQEICQACTLVERLNKNRADIAI 391
>gi|365760832|gb|EHN02520.1| Ncs6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 295
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/271 (64%), Positives = 218/271 (80%), Gaps = 2/271 (0%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
+LC C+ RKA +KRPK L ++C++CF VFE EIH IV N LF+ GERIA+GASGGK
Sbjct: 19 SQLCELCHSRKALIKRPKNLSKLCKQCFCLVFETEIHNTIVTNSLFQRGERIAVGASGGK 78
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA +L LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KD
Sbjct: 79 DSTVLAHMLKLLNDRHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYGLPLEIFSFKD 138
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LY WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NIL
Sbjct: 139 LYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNIL 198
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ARL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+
Sbjct: 199 RGDVARLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAF 257
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRI 282
RG ARE++K+LE +RP I+DII+SGEN +
Sbjct: 258 RGTAREYMKNLEAVRPSCIVDIIQSGENLAL 288
>gi|336276694|ref|XP_003353100.1| hypothetical protein SMAC_03418 [Sordaria macrospora k-hell]
gi|380092585|emb|CCC09862.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 403
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK ++C+ CF +FEEE+H IV ++LF GER+AIGASGGKDS
Sbjct: 5 LCAICKTERANIKRPKNHARVCKGCFLTLFEEEVHHTIVSSKLFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVQTIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG+ + R KP KY YEKEI+ YAY K+LDYFSTECIYSP A+RG
Sbjct: 185 DMGRLARSTNIVTGDASSDVKRSKPLKYAYEKEIVM-YAYHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILDI++SGE+
Sbjct: 244 TARGLIKQLERIRPSAILDILRSGEDM 270
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ+ C+AC LLEGLN+ ++ I
Sbjct: 371 GNCKRCGYMSSQEICQACTLLEGLNKNRAQIQI 403
>gi|336465933|gb|EGO54098.1| hypothetical protein NEUTE1DRAFT_68471 [Neurospora tetrasperma FGSC
2508]
gi|350287232|gb|EGZ68479.1| adenine nucleotide alpha hydrolases-like protein [Neurospora
tetrasperma FGSC 2509]
Length = 403
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK ++C+ CF +FEEE+H IV ++LF GER+AIGASGGKDS
Sbjct: 5 LCAICKTERANIKRPKNHARVCKGCFLTLFEEEVHHTIVSSKLFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LY
Sbjct: 65 TVLASVLKNLNERYNYGLELILLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG+ + R KP KY YEKEI+ YAY K+LDYFSTECIYSP A+RG
Sbjct: 185 DMGRLARSTNIVTGDGSSDVKRSKPLKYAYEKEIVM-YAYHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILDI++SGE+
Sbjct: 244 TARALIKQLERIRPSAILDILRSGEDM 270
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ+ C+AC+LLEGLN+ ++ I
Sbjct: 371 GNCKRCGYMSSQEICQACMLLEGLNKNRAQIQI 403
>gi|358394704|gb|EHK44097.1| hypothetical protein TRIATDRAFT_300421 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/280 (63%), Positives = 214/280 (76%), Gaps = 4/280 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA +KRPK ++CR+CF VFE+E+H IV ++LF GE++AIGASGGKDST
Sbjct: 6 CVRCQANKAVVKRPKNHHKLCRDCFIAVFEDEVHHTIVSSKLFYPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHNY LDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LYG
Sbjct: 66 VLASVLKTLNERHNYKLDLVLLSIDEGIKGYRDDSLETVKRNALQYDMPLKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L++ + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKTLEIKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRSTSIVTGGSLNDVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IK+LE++RP AILDI++SGE+ T K QG C
Sbjct: 245 ARSLIKNLEKVRPSAILDIVRSGEDMARLTPDK--GQGAC 282
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 283 STSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
S ++ G C +CGY+SSQ C+AC LLEGLN+ P++ I
Sbjct: 352 SGPVQLQTLGKCVKCGYMSSQAMCQACTLLEGLNKNRPEISI 393
>gi|367029973|ref|XP_003664270.1| hypothetical protein MYCTH_2306919 [Myceliophthora thermophila ATCC
42464]
gi|347011540|gb|AEO59025.1| hypothetical protein MYCTH_2306919 [Myceliophthora thermophila ATCC
42464]
Length = 402
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK ++C+ CF VFE+E+H I ++LF GE++AIGASGGKDS
Sbjct: 5 LCANCKTERALIKRPKNHAKLCKACFIRVFEDEVHHTITSSRLFYPGEKVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL +V Y +LY
Sbjct: 65 TVLASVLKTLNERHGYGLELVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ARLSR T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLARLSRSTSIVTGDDQSEVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILDI++SGE+
Sbjct: 244 SARSLIKQLERVRPTAILDIVRSGEDM 270
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 291 QGTCERCGYISSQKWCKACVLLEGLNR 317
+G C+RCGY+SSQ C+AC+LLEGLN+
Sbjct: 369 RGNCKRCGYMSSQDICQACMLLEGLNK 395
>gi|296817831|ref|XP_002849252.1| VEG136 protein [Arthroderma otae CBS 113480]
gi|238839705|gb|EEQ29367.1| VEG136 protein [Arthroderma otae CBS 113480]
Length = 420
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 210/267 (78%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C +C +A + RPK ++C+ECF +FE E HQ IV + LF GERIAIGASGGKDS
Sbjct: 5 ICFSCKSARAVIIRPKNRHKLCKECFLAIFETETHQTIVNSSLFVPGERIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LY
Sbjct: 65 TVLASVLKTLNERYNYGLNLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YA++K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHYKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 244 SARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPK 321
K G CERCGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 356 KTQTMGQCERCGYMSSQKICKACMLLEGLNKNRPK 390
>gi|322711128|gb|EFZ02702.1| VEG136 protein [Metarhizium anisopliae ARSEF 23]
Length = 393
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 214/281 (76%), Gaps = 3/281 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R A +KRPK ++C+ECF VFE+E+H I ++LF GE++AIGASGGKDST
Sbjct: 6 CLRCGNR-AVIKRPKNHHKLCKECFLSVFEDEVHHTITSSKLFFPGEKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHNYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +L+G
Sbjct: 65 VLASVLKTLNERHNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELFG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA+LL + + TGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDQVVETIGKKGNCTYCGVFRRQALDRGANLLNIKHVVTGHNADDIAETVLMNLLRGD 184
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ KRLDYFSTECIYSP A+RG
Sbjct: 185 LPRLSRSTSIVTGSASTGIQRSKPLKYAYEKEIVL-YAHHKRLDYFSTECIYSPEAFRGT 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
AR IK LE++RP AILDI++SGE+ T K + C+
Sbjct: 244 ARTLIKSLEKVRPSAILDIVRSGEDMARLTPDKSQDACACD 284
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C +CGY+SSQ+ C AC LLE LN+ P++ I
Sbjct: 361 GACIKCGYMSSQQVCHACTLLETLNKNRPEVSI 393
>gi|302920147|ref|XP_003053010.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733950|gb|EEU47297.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 388
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/280 (62%), Positives = 216/280 (77%), Gaps = 4/280 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A +KRPK ++CRECF VFE+E+H I +QLF GER+AIGASGGKDST
Sbjct: 6 CNRCQNNRAVVKRPKNHHKLCRECFLRVFEDEVHHTITSSQLFFRGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGLDL LLS+DEGI GYRDDSL+TVKRN +QY +PL+IV Y +LYG
Sbjct: 66 VLASVMKTLNERHDYGLDLVLLSVDEGIKGYRDDSLETVKRNAVQYDMPLEIVGYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADDIAETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKKLAIKHVVTGHNADDIAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG+ + + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARSTSIVTGDSNSDVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IK+LE++RP AILDI++SGE+ T K +G C
Sbjct: 245 ARGLIKNLEKVRPSAILDIVRSGEDMARLTPEK--NRGAC 282
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 281 RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
R +T + G C +CGY+SSQ C+AC LLE LN+ ++ I
Sbjct: 345 RQKEATPLQTLGKCVKCGYMSSQTMCQACTLLENLNKNRAEIAI 388
>gi|378731641|gb|EHY58100.1| hypothetical protein HMPREF1120_06118 [Exophiala dermatitidis
NIH/UT8656]
Length = 421
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/267 (63%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C +A + RPK ++IC++CF VFE+EIHQ IV N+LF GER+AIGASGGKDS
Sbjct: 5 ICEVCKDARAQVIRPKNSQKICKQCFLAVFEDEIHQTIVSNKLFHRGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH+YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y LY
Sbjct: 65 TVLASVLKTLNERHDYGLNLVLLSIDEGIKGYRDDSLETVKRNAVQYEMPLEIVGYDQLY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T+ I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARATSIMTSSAASEIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI+KSGE+
Sbjct: 244 SARTLIKDLEKIRPSSILDIVKSGEDM 270
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGY+SSQK CKAC LLEGLN+ P+ I
Sbjct: 364 GQCERCGYLSSQKVCKACSLLEGLNKSRPQTSI 396
>gi|310800566|gb|EFQ35459.1| PP-loop family protein [Glomerella graminicola M1.001]
Length = 396
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 212/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK +++C+ CF VFEEE+H IV + LF GE++AIGASGGKDS
Sbjct: 5 LCAKCKTERALVKRPKNHQKLCKHCFISVFEEEVHHTIVSSALFSPGEKVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL +LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL ++ Y +LY
Sbjct: 65 TVLASVLKDLNERYHYGLDLVLLSIDEGIKGYRDDSLETVKRNATQYEMPLTVIGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVQTIGKKGNCTYCGVFRRQALDRGAKMLGIKHLVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL R T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLGRSTSIVTGDDTCDVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILDI++SGE+
Sbjct: 244 TARTLIKNLERVRPSAILDIVRSGEDM 270
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 281 RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
R S + G CERCGY+SSQ C+AC+L++GLN+ ++ I
Sbjct: 352 RALPSVPLQTLGKCERCGYMSSQAICQACLLVDGLNKNKAQIRI 395
>gi|402086323|gb|EJT81221.1| ATP-binding domain-containing protein 3 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 411
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/266 (63%), Positives = 211/266 (79%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A +KRPK +++C++CF +VFE+EIH I LF GE+IAIGASGGKDST
Sbjct: 6 CAICQTERALIKRPKNHQKLCKKCFIQVFEDEIHHTITSAGLFFPGEKIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RH+YGLDL LLS+DEGI GYRDDSL+TVKRN +QY +PLKIV Y +LYG
Sbjct: 66 VLASVLKTLNERHSYGLDLVLLSVDEGIKGYRDDSLETVKRNAMQYDMPLKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CG+FRRQALDRGA +L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETVGKKGNCTYCGIFRRQALDRGAKVLGIQHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ARLSR T ++T G I R KP KY YEKEI+ YA+ K+LDYF+TECIYSP A+RG
Sbjct: 186 LARLSRSTNIVTGGAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFTTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILD+++SGE+
Sbjct: 245 ARSLIKSLERVRPSAILDVVRSGEDM 270
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G+CERCGY+SSQ C+AC LLEGLN+ P++ I
Sbjct: 375 GSCERCGYMSSQTICQACKLLEGLNKNRPRIVI 407
>gi|340514229|gb|EGR44495.1| predicted protein [Trichoderma reesei QM6a]
Length = 394
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/280 (63%), Positives = 212/280 (75%), Gaps = 4/280 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA +KRPK ++CRECF VFE+E+H IV ++LF GE++AIGASGGKDST
Sbjct: 6 CVRCQTNKAVVKRPKNHHKLCRECFINVFEDEVHHTIVSSKLFYPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RH Y LDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LYG
Sbjct: 66 VLASVLKTLNERHKYELDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKTLGIKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRSTSIVTGGSLNDVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IK+LE++RP AILDI++SGE+ T K QG C
Sbjct: 245 ARSLIKNLEKVRPSAILDIVRSGEDMARLTPDK--GQGAC 282
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C +CGY+SSQ C+AC LLE LN+ P++ I
Sbjct: 360 GKCVKCGYMSSQSMCQACTLLESLNKNRPEISI 392
>gi|322698661|gb|EFY90429.1| VEG136 protein [Metarhizium acridum CQMa 102]
Length = 393
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/281 (62%), Positives = 213/281 (75%), Gaps = 3/281 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R A +KRPK ++C+ECF FE+E+H I ++LF GE++AIGASGGKDST
Sbjct: 6 CLRCGNR-AVIKRPKNHHKLCKECFLSAFEDEVHHTITSSKLFYPGEKVAIGASGGKDST 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHNYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +L+G
Sbjct: 65 VLASVLKTLNERHNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELFG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA+LL + + TGHNADDIAETVL+N+LRGD
Sbjct: 125 WTMDQVVETIGKKGNCTYCGVFRRQALDRGANLLNIKHVVTGHNADDIAETVLMNLLRGD 184
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 LPRLSRSTSIVTGSASTGIQRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 243
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
AR IK LE++RP AILDI++SGE+ T K + C+
Sbjct: 244 ARTLIKSLEKVRPSAILDIVRSGEDMARLTPDKSQDACACD 284
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C +CGY+SSQ+ C AC LLE LN+ P++ I
Sbjct: 361 GACIKCGYMSSQQVCHACTLLETLNKNRPEVSI 393
>gi|315052150|ref|XP_003175449.1| PP-loop ATPase superfamily protein [Arthroderma gypseum CBS 118893]
gi|311340764|gb|EFQ99966.1| PP-loop ATPase superfamily protein [Arthroderma gypseum CBS 118893]
Length = 428
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 207/266 (77%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK ++C+ECF +FE E HQ I+ + LF GERIAIGASGGKDST
Sbjct: 6 CFNCKSARAVIIRPKNRHKLCKECFLAIFETETHQTIINSSLFAPGERIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL+IVSY +LYG
Sbjct: 66 VLASVLKTLNARYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAIQYDMPLEIVSYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 245 ARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 369 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|358386086|gb|EHK23682.1| hypothetical protein TRIVIDRAFT_37830 [Trichoderma virens Gv29-8]
Length = 392
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/280 (63%), Positives = 212/280 (75%), Gaps = 4/280 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA +KRPK ++CRECF VFE+E+H I+ ++LF GE++AIGASGGKDST
Sbjct: 6 CVRCQANKAVVKRPKNHHKLCRECFITVFEDEVHHTIISSKLFYPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RH Y LDL LLSIDEGI GYRDDSL+TVKRN +QY +PLKIV Y +LYG
Sbjct: 66 VLASVLKTLNERHKYELDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKTLGIKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRSTSIVTGGSLNDVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IK+LE++RP AILDI++SGE+ T K QG C
Sbjct: 245 ARSLIKNLEKVRPSAILDIVRSGEDMARLTPDK--GQGAC 282
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C +CGY+SSQ C+AC LLE LN+ P++ I
Sbjct: 360 GKCVKCGYMSSQAMCQACTLLENLNKNRPEISI 392
>gi|46128203|ref|XP_388655.1| hypothetical protein FG08479.1 [Gibberella zeae PH-1]
Length = 392
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 215/283 (75%), Gaps = 4/283 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A +KRPK ++CR+CF +VFE+E+H I ++LF GER+AIGASGGKDST
Sbjct: 6 CFRCKNNRAVVKRPKNHHKLCRDCFIQVFEDEVHHTITSSKLFFRGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGLDL LLS+DEGI GYRDDSL+TVKRN +QY +PL+IV Y +LYG
Sbjct: 66 VLASVMKTLNERHDYGLDLVLLSVDEGIKGYRDDSLETVKRNAVQYDMPLEIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 MPRLSRSTSIVTGNSSSEVMRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERC 297
AR IK+LE++RP AILDI++SGE+ T K QG C C
Sbjct: 245 ARGLIKNLEKVRPSAILDIVRSGEDMARLTPDK--GQGACGGC 285
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P+Q G C +CGY+SSQ C+AC LLEGLN+ ++ I
Sbjct: 355 PKQSLGKCIKCGYMSSQTMCQACTLLEGLNKNRAEIAI 392
>gi|408396001|gb|EKJ75170.1| hypothetical protein FPSE_04643 [Fusarium pseudograminearum CS3096]
Length = 393
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 215/283 (75%), Gaps = 4/283 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A +KRPK ++CR+CF +VFE+E+H I ++LF GER+AIGASGGKDST
Sbjct: 6 CFRCKNNRAVVKRPKNHHKLCRDCFIQVFEDEVHHTITSSKLFFRGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RH+YGLDL LLS+DEGI GYRDDSL+TVKRN +QY +PL+IV Y +LYG
Sbjct: 66 VLASVMKTLNERHDYGLDLVLLSVDEGIKGYRDDSLETVKRNAVQYDMPLEIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 MPRLSRSTSIVTGNSSSEVMRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERC 297
AR IK+LE++RP AILDI++SGE+ T K QG C C
Sbjct: 245 ARGLIKNLEKVRPSAILDIVRSGEDMARLTPDK--GQGACGGC 285
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P+Q G C +CGY+SSQ C+AC LLEGLN+ ++ I
Sbjct: 356 PKQSLGKCVKCGYMSSQAMCQACTLLEGLNKNRAEIAI 393
>gi|380470377|emb|CCF47769.1| PP-loop family protein [Colletotrichum higginsianum]
Length = 396
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 212/266 (79%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A +KRPK +++C+ CF VFEEE+H I+ + +F GE++AIGASGGKDST
Sbjct: 6 CAKCKTERALVKRPKNHQKLCKACFISVFEEEVHHTIISSSIFSPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL +LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL +V Y +LYG
Sbjct: 66 VLASVLKDLNERYHYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHLVTGHNADDVAETILMNLLRGD 185
Query: 196 IARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL R T I TG+D + R KP KY+YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLGRSTSIVTGDDTCDVKRSKPLKYSYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILDI++SGE+
Sbjct: 245 ARTLIKNLERVRPSAILDIVRSGEDM 270
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGY+SSQ C+AC+L++GLN+ ++ I
Sbjct: 364 GKCERCGYMSSQAICQACLLVDGLNKNKAQIRI 396
>gi|327299008|ref|XP_003234197.1| PP-loop ATPase superfamily protein [Trichophyton rubrum CBS 118892]
gi|326463091|gb|EGD88544.1| PP-loop ATPase superfamily protein [Trichophyton rubrum CBS 118892]
Length = 427
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 206/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C++CF +FE E HQ I LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKAARAVIIRPKNRHKLCKDCFLTIFETETHQTITNGSLFVPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYEMPLEIVSYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YAY K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAYHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 244 SARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 369 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|342873139|gb|EGU75362.1| hypothetical protein FOXB_14123 [Fusarium oxysporum Fo5176]
Length = 388
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/266 (64%), Positives = 207/266 (77%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A +KRPK ++CR+CF VFE+E+H I + LF GER+AIGASGGKDST
Sbjct: 6 CVRCQNSRAVVKRPKNHHKLCRDCFIRVFEDEVHHTITSSDLFFRGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V+ LN RHNYGLDL LLS+DEGI GYRDDSL+TVKRN IQY +PL+IV Y +LYG
Sbjct: 66 VLASVMKTLNERHNYGLDLVLLSVDEGIKGYRDDSLETVKRNAIQYDMPLEIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 MPRLSRSTSIVTGNASSEVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGT 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LE++RP AILDI++SGE+
Sbjct: 245 ARGLIKNLEKVRPSAILDIVRSGEDM 270
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 286 TKMPEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
T P+Q G C +CGY+SSQ C+AC LLEGLN+ ++ I
Sbjct: 348 TPAPKQNLGKCVKCGYMSSQTMCQACTLLEGLNKNRAEIAI 388
>gi|67516337|ref|XP_658054.1| hypothetical protein AN0450.2 [Aspergillus nidulans FGSC A4]
gi|40747393|gb|EAA66549.1| hypothetical protein AN0450.2 [Aspergillus nidulans FGSC A4]
gi|259489303|tpe|CBF89461.1| TPA: PP-loop ATPase superfamily protein, putative (AFU_orthologue;
AFUA_1G04710) [Aspergillus nidulans FGSC A4]
Length = 422
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 207/269 (76%), Gaps = 2/269 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C + +A + RPK ++CRECF EVFE E+H+ I N LF GERIAIGASGGKDS
Sbjct: 5 LCFKCQKERAVIIRPKNRHKLCRECFLEVFETEVHETITSNSLFHPGERIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+ YGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL IV Y +LY
Sbjct: 65 TVLASVLKTLNERYEYGLDLCLLSIDEGIRGYRDDSLETVKRNAVQYNMPLVIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVEQIGKKGNCTYCGVFRRQALDRGAERLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHKQLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRI 282
AR IKDLE++RP +ILDI++SGE +
Sbjct: 244 SARTLIKDLEKIRPSSILDIVRSGEEMAV 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGYISSQ+ C AC LLEGLN+ PK I
Sbjct: 364 GKCERCGYISSQRTCHACTLLEGLNKNRPKAAI 396
>gi|429849517|gb|ELA24894.1| pp-loop atpase superfamily [Colletotrichum gloeosporioides Nara
gc5]
Length = 400
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 168/267 (62%), Positives = 212/267 (79%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A +KRPK +++C+ CF VFEEE+H IV + LF GE++AIGASGGKDS
Sbjct: 5 LCANCKIERALVKRPKNHQKLCKACFISVFEEEVHHTIVSSALFAPGEKVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL +V Y LY
Sbjct: 65 TVLASVLKTLNERYSYGLELELLSIDEGIKGYRDDSLETVKRNAVQYDMPLTVVGYDQLY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHLVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL R T ITTG+D + R KP KY+YEKEI+ YA+ ++LDYFSTEC+YSP A+RG
Sbjct: 185 DLPRLGRSTSITTGDDSSDVKRSKPLKYSYEKEIVL-YAHHQKLDYFSTECLYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILDI++SGE+
Sbjct: 244 TARTLIKNLERVRPSAILDIVRSGEDM 270
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 34/44 (77%)
Query: 281 RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ +T+ + + G+CERCGY+SSQ C+AC+L++GLN+ P++ I
Sbjct: 357 QAATNGPLQKLGSCERCGYMSSQAVCQACLLVDGLNKNKPEIRI 400
>gi|326482259|gb|EGE06269.1| ATP-binding domain-containing protein 3 [Trichophyton equinum CBS
127.97]
Length = 427
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 207/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C++CF +FE E HQ I + LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKAARAVIIRPKNRHKLCKDCFLTIFETETHQTITNSGLFVPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL+IVSY +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 244 SARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 369 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|302500828|ref|XP_003012407.1| hypothetical protein ARB_01366 [Arthroderma benhamiae CBS 112371]
gi|291175965|gb|EFE31767.1| hypothetical protein ARB_01366 [Arthroderma benhamiae CBS 112371]
Length = 427
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 206/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C++CF +FE E HQ I LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKAARAVIIRPKNRHKLCKDCFLTIFETETHQTITNGSLFVPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL+IVSY +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 244 SARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 369 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|302655364|ref|XP_003019472.1| hypothetical protein TRV_06501 [Trichophyton verrucosum HKI 0517]
gi|291183197|gb|EFE38827.1| hypothetical protein TRV_06501 [Trichophyton verrucosum HKI 0517]
Length = 427
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 206/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C++CF +FE E HQ I LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKAARAVIIRPKNRHKLCKDCFLTIFETETHQTITNGSLFVPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYEMPLEIVSYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 244 SARTLIKDLERIRPSAILDIVRSGEDM 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 369 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|406867388|gb|EKD20426.1| PP-loop ATPase superfamily protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 431
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 209/267 (78%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +A + RPK +++C+ CF +FEEEIH I+ +LF G+RIAIGASGGKDS
Sbjct: 5 LCAICKTARALIIRPKNAQKLCKPCFITIFEEEIHHTIITTKLFTRGDRIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY + LKIV Y +LY
Sbjct: 65 TVLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNATQYEMELKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRG
Sbjct: 125 GWTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETILMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T GE + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTSIVTGGESSEVRRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IK LER+RP AILD+++SGE+
Sbjct: 244 SARTLIKSLERVRPSAILDVVRSGEDM 270
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
GTC+ CGY+SSQ CKAC+LLEGLN+ PKM I
Sbjct: 375 GTCKTCGYMSSQDICKACMLLEGLNKNRPKMEI 407
>gi|440635171|gb|ELR05090.1| hypothetical protein GMDG_07132 [Geomyces destructans 20631-21]
Length = 438
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/273 (62%), Positives = 211/273 (77%), Gaps = 2/273 (0%)
Query: 9 KKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGA 68
+K +C+ C +A + RPK +++C+ CF ++FE+EIH I LF G+RIAIGA
Sbjct: 5 QKMPPSICAICETNRALIIRPKNHQKLCKVCFIQIFEDEIHHTITTTNLFTPGDRIAIGA 64
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDSTVLA VL LN RHNYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PLKIV
Sbjct: 65 SGGKDSTVLASVLKTLNERHNYGLDLVLLSIDEGIKGYRDDSLETVKRNAEQYEMPLKIV 124
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y +LYGWTMD++V IG K NCT+CGVFRRQALDRGA++L ++ + TGHNADD+AET+L
Sbjct: 125 GYDELYGWTMDQVVATIGKKGNCTYCGVFRRQALDRGANMLGINHVVTGHNADDVAETIL 184
Query: 189 LNILRGDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+N+LRGD+ RL+R T I TG+ + R KP KY YEKEI+ YA+ K+LDYFSTECIYS
Sbjct: 185 MNLLRGDLPRLARSTSIITGDATSSVRRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYS 243
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
P A+RG AR IK LER+RP AILD+++SGE+
Sbjct: 244 PEAFRGSARTLIKALERVRPSAILDVVRSGEDM 276
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 287 KMPEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+P Q GTC+RCGY+SSQ CKAC LLEGLN+ P++ I
Sbjct: 374 KLPRQTLGTCQRCGYMSSQAICKACTLLEGLNKNRPQVEI 413
>gi|350637971|gb|EHA26327.1| hypothetical protein ASPNIDRAFT_134215 [Aspergillus niger ATCC
1015]
Length = 415
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/274 (62%), Positives = 211/274 (77%), Gaps = 2/274 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ ++A + RPK +++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL IVSY DLYG
Sbjct: 66 VLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ ++LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKM 288
AR IKDLE++RP +ILDI+KSGE+ + T++
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMALLVPTEV 278
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
GTCERCGYISSQ+ CKAC LLEGLN+ PK I G +E +
Sbjct: 356 GTCERCGYISSQRVCKACTLLEGLNKNRPKTAIEMEIGLEDEES 399
>gi|389631945|ref|XP_003713625.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae 70-15]
gi|351645958|gb|EHA53818.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae 70-15]
gi|440467896|gb|ELQ37090.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae Y34]
gi|440478642|gb|ELQ59461.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae P131]
Length = 412
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 166/270 (61%), Positives = 211/270 (78%), Gaps = 5/270 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A +KRPK ++C++CF ++FE+E+H I + LF GER+AIGASGGKDS
Sbjct: 5 LCVLCGTERALIKRPKNHHKLCKKCFIQIFEDEVHHTITSSNLFTPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+ YGL+L LLS+DEGI GYRDDSL+TVKRN +QY +PLKIV Y +LY
Sbjct: 65 TVLASVLKTLNERYKYGLELVLLSVDEGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ +G K NCT+CG+FRRQALDRGA +L + + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWTMDQVVETVGKKGNCTYCGIFRRQALDRGAKVLDIKHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
D+ARLSR T I TG + + R KP KY YEKEI+ YA+ K+LDYFSTEC+YSP A
Sbjct: 185 DLARLSRSTNIMTGANSALSDNVKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECLYSPEA 243
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENF 280
+RG AR IK+LE++RP AILDI++SGE+
Sbjct: 244 FRGSARSLIKNLEKVRPSAILDIVRSGEDM 273
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
GTC RCGY+SSQ C+AC LL+GLN+ P++ +
Sbjct: 376 GTCIRCGYMSSQAICQACTLLDGLNKNRPQIQV 408
>gi|242802619|ref|XP_002484007.1| PP-loop ATPase superfamily protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717352|gb|EED16773.1| PP-loop ATPase superfamily protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 478
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 216/292 (73%), Gaps = 2/292 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C+ CF +FE EIH+ I+ LFK GERIAIGASGGKDS
Sbjct: 5 LCFNCQTSRAVIIRPKNRHKLCKSCFISIFESEIHETIISTSLFKRGERIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNVRYDYGLDLVLLSIDEGIKGYRDDSLETVKRNAKQYDMPLEIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + I TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAQVGKKGNCTYCGVFRRQALDRGAARLGIKHIVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG+D + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTGQDSTDMKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
AR IKDLE++RP +ILDI++SGE+ + ++ G + + + +
Sbjct: 244 SARTLIKDLEKIRPSSILDIVRSGEDMALLVPAEVSGSGKTQASSTVDADDY 295
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGYISSQK CKAC LL+GLN+ PK I
Sbjct: 360 GKCERCGYISSQKVCKACTLLDGLNKNRPKTSI 392
>gi|317026023|ref|XP_001388768.2| cytoplasmic tRNA 2-thiolation protein 1 [Aspergillus niger CBS
513.88]
Length = 415
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 208/268 (77%), Gaps = 2/268 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ ++A + RPK +++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL IVSY DLYG
Sbjct: 66 VLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ ++LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRI 282
AR IKDLE++RP +ILDI+KSGE+ +
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMAL 272
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
GTCERCGYISSQ+ CKAC LLEGLN+ PK I G +E +
Sbjct: 356 GTCERCGYISSQRVCKACTLLEGLNKNRPKTAIEMEIGLEDEES 399
>gi|156064273|ref|XP_001598058.1| hypothetical protein SS1G_00144 [Sclerotinia sclerotiorum 1980]
gi|154691006|gb|EDN90744.1| hypothetical protein SS1G_00144 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 430
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 207/266 (77%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A + RPK +++C+ CF +FE EIH I LF G+RIAIGASGGKDST
Sbjct: 6 CAICKSARALIIRPKNHQKLCKACFIAIFEAEIHHTITSTSLFSPGDRIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN IQY +PLKIV Y +LYG
Sbjct: 66 VLASVLKTLNERYNYGLELVLLSIDEGIKGYRDDSLETVKRNAIQYEMPLKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA +L + + TGHNADD+AET+L+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETILMNLLRGD 185
Query: 196 IARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG E + R KP KY YEKEI+ YA+ K+LDYFSTEC+YSP A+RG
Sbjct: 186 LPRLARSTSIVTGDESSDVRRSKPLKYAYEKEIVL-YAHHKKLDYFSTECLYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILD+++SGE+
Sbjct: 245 ARSLIKNLERVRPSAILDVVRSGEDM 270
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
G C++CGY+SSQ+ CKACVLLEGLN+ PKM
Sbjct: 373 GKCKKCGYMSSQEICKACVLLEGLNKNRPKM 403
>gi|392868403|gb|EAS34186.2| cytoplasmic tRNA 2-thiolation protein 1 [Coccidioides immitis RS]
Length = 431
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK ++C++CF +FE E H+ I + LF GER+AIGASGGKDST
Sbjct: 6 CFNCKSARAVIIRPKNRHKLCKQCFLRIFETETHETITQSALFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LYG
Sbjct: 66 VLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG I R KP KY YEKEI+ YA+ K LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARGTYIVTGSSASEIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
AR IKDLE++RP +ILDI++SGE+ +++ TC IS+
Sbjct: 245 ARTLIKDLEKIRPSSILDIVRSGEDMAELVPSEISTSATCASKNAISA 292
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPK 321
K+ G CERCGY+SSQK CKAC LLEGLN+ P+
Sbjct: 367 KVQTMGQCERCGYLSSQKICKACTLLEGLNKSRPQ 401
>gi|358372109|dbj|GAA88714.1| PP-loop ATPase superfamily protein [Aspergillus kawachii IFO 4308]
Length = 415
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 208/268 (77%), Gaps = 2/268 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ ++A + RPK +++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL IVSY DLYG
Sbjct: 66 VLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I TG I R KP KY YEKEI+ YA+ ++LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTGSAASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRI 282
AR IKDLE++RP +ILDI+KSGE+ +
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMAL 272
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
GTCERCGYISSQ+ CKAC LLEGLN+ PK I G +E +
Sbjct: 356 GTCERCGYISSQRVCKACTLLEGLNKNRPKTAIEMEVGLEDEES 399
>gi|119496839|ref|XP_001265193.1| PP-loop ATPase superfamily protein, putative [Neosartorya fischeri
NRRL 181]
gi|119413355|gb|EAW23296.1| PP-loop ATPase superfamily protein, putative [Neosartorya fischeri
NRRL 181]
Length = 420
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/285 (60%), Positives = 216/285 (75%), Gaps = 4/285 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C + +A + RPK ++CR CF EVFE E+H+ I + LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKEARAVIIRPKNRHKLCRACFLEVFETEVHETITSSSLFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERYNYGLELCLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVGYSELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTDSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCG 298
AR IKDLE++RP +ILDI+KSGE+ ++ G ++CG
Sbjct: 244 SARTLIKDLEKIRPSSILDIVKSGEDMAALVPLEVSSSG--KKCG 286
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CERCGYISSQK CKAC+LL+GLN+ PK
Sbjct: 361 GKCERCGYISSQKICKACMLLDGLNKNRPK 390
>gi|70990742|ref|XP_750220.1| PP-loop ATPase superfamily protein [Aspergillus fumigatus Af293]
gi|66847852|gb|EAL88182.1| PP-loop ATPase superfamily protein, putative [Aspergillus fumigatus
Af293]
gi|159130696|gb|EDP55809.1| PP-loop ATPase superfamily protein, putative [Aspergillus fumigatus
A1163]
Length = 420
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 215/280 (76%), Gaps = 8/280 (2%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C + +A + RPK ++CR CF EVFE E+H+ I + LF GER+AIGASGGKDS
Sbjct: 5 LCFNCKEARAVIIRPKNRHKLCRACFLEVFETEVHETITSSSLFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERYNYGLELCLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVGYSELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTDSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGEN------FRISTSTK 287
AR IKDLE++RP +ILDI+KSGE+ F +S+S K
Sbjct: 244 SARTLIKDLEKIRPSSILDIVKSGEDMAALVPFEVSSSGK 283
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
G CERCGYISSQK CKAC+LL+GLN+ PK I + G E +
Sbjct: 361 GNCERCGYISSQKICKACMLLDGLNKNRPKTAIEVAVGIEEEES 404
>gi|320032845|gb|EFW14795.1| PP-loop ATPase superfamily protein [Coccidioides posadasii str.
Silveira]
Length = 431
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 170/280 (60%), Positives = 210/280 (75%), Gaps = 2/280 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK ++C++CF +FE E H+ I + LF GER+AIGASGGKDST
Sbjct: 6 CFNCKSARAVIIRPKNRHKLCKQCFLRIFETETHETITQSALFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LYG
Sbjct: 66 VLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG I R KP KY YEKEI+ YA+ K LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARGTYIVTGSSASEIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IKDLE++RP +ILDI++SGE+ +++ TC
Sbjct: 245 ARTLIKDLEKIRPSSILDIVRSGEDMAELVPSEISTSATC 284
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+ G CERCGY+SSQK CKAC LLEGLN+ P+ +
Sbjct: 367 KVQTMGQCERCGYLSSQKICKACTLLEGLNKSRPQTSV 404
>gi|303322809|ref|XP_003071396.1| PP-loop family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111098|gb|EER29251.1| PP-loop family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 431
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 170/280 (60%), Positives = 210/280 (75%), Gaps = 2/280 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK ++C++CF +FE E H+ I + LF GER+AIGASGGKDST
Sbjct: 6 CFNCKSARAVIIRPKNRHKLCKQCFLRIFETETHETITQSPLFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LYG
Sbjct: 66 VLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG I R KP KY YEKEI+ YA+ K LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARGTYIVTGSSASEIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IKDLE++RP +ILDI++SGE+ +++ TC
Sbjct: 245 ARTLIKDLEKIRPSSILDIVRSGEDMAELVPSEISTSATC 284
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+ G CERCGY+SSQK CKAC LLEGLN+ P+ +
Sbjct: 367 KVQTMGQCERCGYLSSQKICKACTLLEGLNKSRPQTSV 404
>gi|295674393|ref|XP_002797742.1| PP-loop ATPase superfamily protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280392|gb|EEH35958.1| PP-loop ATPase superfamily protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 404
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 207/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C +C +A + RPK ++C+ CF EVFE+EIH IV LF GER+AIGASGGKDS
Sbjct: 5 ICYSCKSARALIVRPKNRHKLCKLCFLEVFEQEIHDTIVSKALFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RHNYGL L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNDRHNYGLHLTLLSIDEGIKGYRDDSLETVKRNAVQYSMPLEIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRATSIVTESSASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI++SGE+
Sbjct: 244 SARTLIKDLEKMRPSSILDIVRSGEDM 270
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQ 330
K+ G C +CGY++SQ+ CKAC+LL GLN+G PK I + G+
Sbjct: 355 KLQTMGRCVQCGYLASQRICKACMLLAGLNKGRPKTSIEVAVGK 398
>gi|212540204|ref|XP_002150257.1| PP-loop ATPase superfamily protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067556|gb|EEA21648.1| PP-loop ATPase superfamily protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 419
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/279 (61%), Positives = 213/279 (76%), Gaps = 2/279 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + R K ++C+ CF E+FE EIH+ IV LFK GERIAIGASGGKDS
Sbjct: 5 LCFNCQASRAVIIRRKNRHKLCKACFIEIFETEIHETIVSTSLFKRGERIAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R++YGL+L LLSIDEGI GYRDDSL+TVKRN QY +PL+IV Y +LY
Sbjct: 65 TVLASVMKTLNERYDYGLNLVLLSIDEGIKGYRDDSLETVKRNAEQYEMPLEIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + I TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAQVGKKGNCTYCGVFRRQALDRGAARLGIKHIVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T I TG+D + R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRGTSIVTGQDSTDMKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
AR IKDLE++RP +ILDI++SGE+ + +++ G
Sbjct: 244 SARTLIKDLEKIRPSSILDIVRSGEDMALLVPSEVSSNG 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G CERCGYISSQK CKAC LL+GLN+ PK I
Sbjct: 362 GKCERCGYISSQKVCKACTLLDGLNKNRPKTSI 394
>gi|121702849|ref|XP_001269689.1| PP-loop ATPase superfamily protein, putative [Aspergillus clavatus
NRRL 1]
gi|119397832|gb|EAW08263.1| PP-loop ATPase superfamily protein, putative [Aspergillus clavatus
NRRL 1]
Length = 417
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/284 (59%), Positives = 215/284 (75%), Gaps = 4/284 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +A + RPK ++CR CF E+FE E+H+ I + LF GER+AIGASGGKDST
Sbjct: 6 CFNCKESRAVVIRPKNRHKLCRSCFLEIFETEVHETITASSLFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LYG
Sbjct: 66 VLASVLKTLNERYNYGLELCLLSIDEGIRGYRDDSLETVKRNAVQYDMPLEIVGYSELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTDSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCG 298
AR IKDLE++RP +ILDI+KSGE+ ++ G ++CG
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDMAALVPLEVSSSG--KKCG 286
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
G CERCGYISSQK CKAC+LL+GLN+ P+ I G +E +
Sbjct: 358 GKCERCGYISSQKICKACMLLDGLNKNRPRTAIEVGVGMEDEES 401
>gi|225678029|gb|EEH16313.1| VEG136 [Paracoccidioides brasiliensis Pb03]
Length = 404
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 206/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC +C +A + RPK ++C+ CF E+FE+EIH IV LF GER+AIGASGGKDS
Sbjct: 5 LCYSCKSARALIIRPKNRHKLCKLCFLELFEQEIHDTIVSKALFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RHNYGL L LLSIDEGI GYRDDSL+TVKRN QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERHNYGLHLTLLSIDEGIKGYRDDSLETVKRNAAQYSMPLEIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRATSIVTESSASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI++SGE+
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDM 270
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQ 330
K+ G C +CGY++SQ+ CKAC+LL GLN+G PK I + G+
Sbjct: 355 KLQTMGRCVQCGYLASQRICKACMLLAGLNKGRPKTSIEVAVGE 398
>gi|226287515|gb|EEH43028.1| PP-loop ATPase superfamily protein [Paracoccidioides brasiliensis
Pb18]
Length = 404
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 206/267 (77%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC +C +A + RPK ++C+ CF E+FE+EIH IV LF GER+AIGASGGKDS
Sbjct: 5 LCYSCKSSRALIIRPKNRHKLCKLCFLELFEQEIHDTIVSKALFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RHNYGL L LLSIDEGI GYRDDSL+TVKRN QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERHNYGLHLTLLSIDEGIKGYRDDSLETVKRNAAQYSMPLEIVGYDELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLSRATSIVTESSASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI++SGE+
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDM 270
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQ 330
K+ G C +CGY++SQ+ CKAC+LL GLN+G PK I + G+
Sbjct: 355 KLQTMGRCVQCGYLASQRICKACMLLAGLNKGRPKTSIEVAVGE 398
>gi|119189797|ref|XP_001245505.1| hypothetical protein CIMG_04946 [Coccidioides immitis RS]
Length = 1673
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 213/288 (73%), Gaps = 2/288 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK ++C++CF +FE E H+ I + LF GER+AIGASGGKDST
Sbjct: 6 CFNCKSARAVIIRPKNRHKLCKQCFLRIFETETHETITQSALFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN +QY +PL+IVSY +LYG
Sbjct: 66 VLASVLKTLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG I R KP KY YEKEI+ YA+ K LDYFSTECIYSP A+RG
Sbjct: 186 LPRLARGTYIVTGSSASEIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
AR IKDLE++RP +ILDI++SGE+ +++ TC IS+
Sbjct: 245 ARTLIKDLEKIRPSSILDIVRSGEDMAELVPSEISTSATCASKNAISA 292
>gi|239608873|gb|EEQ85860.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis ER-3]
Length = 421
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 169/281 (60%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN +A + RPK ++C+ CF E+FE EIH I N LF GER+AIGASGGKDS
Sbjct: 5 ICYRCNSARALIIRPKNRHKLCKPCFLEIFETEIHNTITANALFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERYSYGLELMLLSIDEGIHGYRDDSLETVKRNAVQYSMPLEIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVSEIGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARATSIVTESTASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IKDLE++RP +ILDI++SGE+ ++ G C
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDMARLVPPEISGSGKC 284
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
K+ G CERCGY++SQ+ CKAC+LLEGLN+ PK I + G + E +
Sbjct: 356 KLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTIELAVGIDEEES 404
>gi|327357985|gb|EGE86842.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis ATCC
18188]
Length = 419
Score = 363 bits (931), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 169/281 (60%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN +A + RPK ++C+ CF E+FE EIH I N LF GER+AIGASGGKDS
Sbjct: 3 ICYRCNSARALIIRPKNRHKLCKPCFLEIFETEIHNTITANALFYPGERVAIGASGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 63 TVLASVLKTLNERYSYGLELMLLSIDEGIHGYRDDSLETVKRNAVQYSMPLEIVGYGELY 122
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 123 GWTMDQVVSEIGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRG 182
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 183 DLPRLARATSIVTESTASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IKDLE++RP +ILDI++SGE+ ++ G C
Sbjct: 242 SARTLIKDLEKVRPSSILDIVRSGEDMARLVPPEISGSGKC 282
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
K+ G CERCGY++SQ+ CKAC+LLEGLN+ PK I + G + E +
Sbjct: 354 KLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTIELAVGIDEEES 402
>gi|425772860|gb|EKV11244.1| PP-loop ATPase superfamily protein, putative [Penicillium digitatum
PHI26]
gi|425782021|gb|EKV19952.1| PP-loop ATPase superfamily protein, putative [Penicillium digitatum
Pd1]
Length = 401
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 207/266 (77%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +A + RPK ++CR CF +VFE E+H+ I+G LF GER+AIGASGGKDST
Sbjct: 6 CFDCKEARAVIIRPKNRHKLCRACFIKVFETEVHETIIGTNLFHPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGL L LLSIDEGI GYRDDSL+TVKRN +QY +PL I+ Y +LYG
Sbjct: 66 VLAAVLKTLNERYNYGLKLCLLSIDEGIRGYRDDSLETVKRNAVQYDMPLDILGYSELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T I T D I R KP KY YEKEI+ YA+ ++LDYF+TECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTSSDASDIKRSKPLKYAYEKEIVL-YAHHRQLDYFTTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI+KSGE+
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDM 270
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CERC YISSQ+ CKAC LL+GLNR PK I
Sbjct: 355 CERCNYISSQRICKACTLLDGLNRNRPKTAI 385
>gi|154312244|ref|XP_001555450.1| hypothetical protein BC1G_06155 [Botryotinia fuckeliana B05.10]
gi|347836818|emb|CCD51390.1| similar to PP-loop ATPase superfamily protein [Botryotinia
fuckeliana]
Length = 430
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 164/266 (61%), Positives = 207/266 (77%), Gaps = 2/266 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A + RPK +++C+ CF +FE EIH I LF G++IAIGASGGKDST
Sbjct: 6 CAICKTARALIIRPKNHQKLCKACFIGIFEAEIHHTITSTSLFSPGDKIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGL+L LLSIDEGI GYRDDSL+TVKRN +QY + LKIV Y +LYG
Sbjct: 66 VLASVLKTLNERYNYGLELVLLSIDEGIKGYRDDSLETVKRNAVQYDMALKIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ IG K NCT+CGVFRRQALDRGA +L ++ + TGHNADD+AET+L+N+LRGD
Sbjct: 126 WTMDQVVETIGKKGNCTYCGVFRRQALDRGAKMLGINHVVTGHNADDVAETILMNLLRGD 185
Query: 196 IARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RL+R T I TG E + R KP KY YEKEI+ YA+ K+LDYF+TEC+YSP A+RG
Sbjct: 186 LPRLARSTSIVTGDESSEVRRSKPLKYAYEKEIVL-YAHHKKLDYFTTECLYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENF 280
AR IK+LER+RP AILD+++SGE+
Sbjct: 245 ARSLIKNLERVRPSAILDVVRSGEDM 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
GTC++CGY+SSQ+ CKACVLLEGLN+ PKM
Sbjct: 373 GTCKKCGYMSSQEICKACVLLEGLNKNRPKM 403
>gi|261187399|ref|XP_002620124.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis
SLH14081]
gi|239594688|gb|EEQ77269.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis
SLH14081]
Length = 421
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/281 (59%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN +A + RPK ++C+ CF E+FE EIH I N LF GER+AIGASGGKDS
Sbjct: 5 ICYRCNSARALIIRPKNRHKLCKPCFLEIFETEIHNTITANALFYPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN R++YGL+L LLSIDEGI GYRD+SL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERYSYGLELMLLSIDEGIHGYRDNSLETVKRNAVQYSMPLEIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 125 GWTMDQVVSEIGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 185 DLPRLARATSIVTESTASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
AR IKDLE++RP +ILDI++SGE+ ++ G C
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDMARLVPPEISGSGKC 284
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERT 335
K+ G CERCGY++SQ+ CKAC+LLEGLN+ PK I + G + E +
Sbjct: 356 KLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTIELAVGIDEEES 404
>gi|169771105|ref|XP_001820022.1| cytoplasmic tRNA 2-thiolation protein 1 [Aspergillus oryzae RIB40]
gi|238486380|ref|XP_002374428.1| PP-loop ATPase superfamily protein, putative [Aspergillus flavus
NRRL3357]
gi|83767881|dbj|BAE58020.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699307|gb|EED55646.1| PP-loop ATPase superfamily protein, putative [Aspergillus flavus
NRRL3357]
gi|391872680|gb|EIT81781.1| cytoplasmic tRNA 2-thiolation protein [Aspergillus oryzae 3.042]
Length = 417
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 216/304 (71%), Gaps = 6/304 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK E++CR CF VFE E+H+ I LF GER+AIGASGGKDST
Sbjct: 6 CFHCQTNRAVIIRPKNREKLCRTCFINVFETEVHETITSTSLFYPGERVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL+IV Y +LYG
Sbjct: 66 VLASVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAEQYEMPLEIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V +G K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRGD
Sbjct: 126 WTMDQVVAQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGD 185
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ RLSR T ++T I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 186 LPRLSRGTSIVTDSAASDIKRSKPLKYAYEKEIVL-YAHHKQLDYFSTECIYSPEAFRGS 244
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
AR IKDLE++RP +ILDI+KSGE+ + +P + + C + + C G
Sbjct: 245 ARTLIKDLEKIRPSSILDIVKSGEDM----AELVPAEIKGKACARAADDESTGGCGSQNG 300
Query: 315 LNRG 318
RG
Sbjct: 301 RTRG 304
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 260 KDLERLRPRAILDIIKSGENFRISTST----KMPEQGTCERCGYISSQKWCKACVLLEGL 315
+++E P + + + +N I ST K GTCERCGYISSQK CKAC LLEGL
Sbjct: 323 REVEIKLPAQSVPLPRKKQNKGIKGSTQKTIKTQTMGTCERCGYISSQKICKACTLLEGL 382
Query: 316 NRGLPKMGIVRSRGQNNERT 335
N+ PK I G +E +
Sbjct: 383 NKNRPKTAIEVGVGLEDEES 402
>gi|449016961|dbj|BAM80363.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 356
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/355 (51%), Positives = 231/355 (65%), Gaps = 20/355 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C KA ++R + ++C+ CF+ FE E+H+ IV + LF+ GERIAI SGGKDS
Sbjct: 2 VCDRCRGGKAQIQRLRDRHRLCKACFFAEFEREVHETIVHHDLFQVGERIAIAISGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VLA VL ELN RH YGL+L LL+IDEGI GYRD SL VKRN GLPL +SY +LY
Sbjct: 62 VVLAHVLKELNERHQYGLELVLLAIDEGIHGYRDASLAAVKRNSSALGLPLVSLSYDELY 121
Query: 135 -GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
GWTMD +V IG NNCTFCGVFRRQAL+RGA ++ +K+ATGHNADD+AETV LN++R
Sbjct: 122 DGWTMDRVVSQIGRTNNCTFCGVFRRQALERGARHIRANKLATGHNADDMAETVFLNLVR 181
Query: 194 GDIARLSRCTLITTGE-----DGP------IPRCKPFKYTYEKEIMFTYAYFKRLDYFST 242
GD ARL + TG P +PR KP Y YEKEI+ YAY+KRLDYF+T
Sbjct: 182 GDSARLRHSADVMTGALANGGTSPDETVHWLPRVKPLLYMYEKEIVM-YAYWKRLDYFAT 240
Query: 243 ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR-----ISTSTKMPEQGTCERC 297
EC+Y+PNA+R FAR+ +K+LE LRPRAI+D + + + +S + C RC
Sbjct: 241 ECVYAPNAFRAFARDLVKELEALRPRAIIDTLTAAQALSRHADGVSAVGTVTAVKQCARC 300
Query: 298 GYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQC 352
GY+SSQ CKAC+LLE L RG K R ++ D Q T++ + QC
Sbjct: 301 GYVSSQVICKACILLEHLRRGTGKEATHRHATRSVFSASD--QTSCTESCAADQC 353
>gi|189192725|ref|XP_001932701.1| hypothetical protein PTRG_02368 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978265|gb|EDU44891.1| hypothetical protein PTRG_02368 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 440
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/353 (52%), Positives = 237/353 (67%), Gaps = 25/353 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN +A + RPK ++C+ CF VFE EIH I N LF+ GE++AIGASGGKDST
Sbjct: 6 CALCNVNRALILRPKDHSKLCKTCFISVFETEIHHTITTNALFQRGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QYG+ L I+ Y +LYG
Sbjct: 66 VLASVLKTLNERYDYGLDLILLSIDEGIKGYRDDSLETVKRNAEQYGMELTILGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + I R KP KY YEKEI+ YA+ K LDYFSTECIY
Sbjct: 186 LPRLSRTTSIVTSTPSASANPASNTNIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
SP A+RG AR IK+LER+RP AILD+++SGE+ + +P G+ + CG + S
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM----AKLVP--GSDQACGGMCSSSIP 298
Query: 307 KA------CVLLEGLNRGLPKMGIVRSRGQNNERTKD--MKQNKGTKNIESKQ 351
A C +G + G M V +R + NE D ++ K++ +KQ
Sbjct: 299 AAEEEEGGCGSAQGRSTG-GDMASVEARLRQNEAAADSNLETEITAKSVSNKQ 350
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ CKACVLLEGLN+ PK I
Sbjct: 382 GQCKRCGYLSSQDICKACVLLEGLNKSRPKNKI 414
>gi|225557681|gb|EEH05967.1| VEG136 protein [Ajellomyces capsulatus G186AR]
Length = 420
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/279 (60%), Positives = 208/279 (74%), Gaps = 2/279 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C+ CF E+FE EIH I N LF GER+AIGASGGKDS
Sbjct: 5 LCYRCKSARALIIRPKNRHKLCKACFVEIFETEIHDTITTNALFNQGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERHGYGLELMLLSIDEGIKGYRDDSLETVKRNAMQYCMPLEIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AET+++N+LRG
Sbjct: 125 GWTMDQVVAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDVAETIVMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T I R KP KY YEKEI+ YA++K+L YFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTNIVTESSASDIKRSKPLKYAYEKEIVL-YAHYKKLCYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
AR IKDLE++RP +ILDI++SGE+ +M G
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDMARLVPLEMSRSG 282
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+ G CERCGY++SQ+ CKAC+LLEGLN+ P+ +
Sbjct: 355 KLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTV 392
>gi|345314618|ref|XP_003429531.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Ornithorhynchus anatinus]
Length = 357
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 221/311 (71%), Gaps = 2/311 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A+L+RPKT + +CR CF FE E+ + G L AG+R+A+GASGGKDS
Sbjct: 5 LCKACGASRASLRRPKTGDALCRTCFCATFEAEVLATVQGAGLLPAGQRVAVGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN +H GLDL LL++DEGI+GYRD +L V R ++GLPL IVSY+ LY
Sbjct: 65 TVLAHVLQRLNTQHGLGLDLQLLAVDEGIAGYRDAALAAVTRQSARWGLPLTIVSYRQLY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWT+D I G ++NCTFCGV RRQAL+RGA LL D+I TGHNADD+AETVL+N LRG
Sbjct: 125 GWTLDAIALQTGRRSNCTFCGVLRRQALERGARLLGADRIVTGHNADDMAETVLMNFLRG 184
Query: 195 D-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D L ++GE G +PRC+P ++ YEKEI+ YAYF+ LDYFSTEC+Y+P+A+RG
Sbjct: 185 DAGRLARGGGLGSSGEGGALPRCRPLQFAYEKEIVL-YAYFQGLDYFSTECVYAPDAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
AR +KDLE RP A+LD++ S E + T P C RCG ++S+ C+AC LL+
Sbjct: 244 RARALLKDLEAARPSAVLDLVHSAERLSLRPGTGPPPPTACTRCGSLASRPLCQACQLLD 303
Query: 314 GLNRGLPKMGI 324
GLNRGLP++GI
Sbjct: 304 GLNRGLPRLGI 314
>gi|325096389|gb|EGC49699.1| VEG136 protein [Ajellomyces capsulatus H88]
Length = 420
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 166/267 (62%), Positives = 205/267 (76%), Gaps = 2/267 (0%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C+ CF E+FE EIH I N LF GER+AIGASGGKDS
Sbjct: 5 LCYRCKSARALIIRPKNRHKLCKACFVEIFETEIHDTITTNALFNQGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RH YGL+L LLSIDEGI GYRDDSL+TVKRN +QY +PL+IV Y +LY
Sbjct: 65 TVLASVLKTLNERHGYGLELMLLSIDEGIKGYRDDSLETVKRNAMQYCMPLEIVGYGELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AET+++N+LRG
Sbjct: 125 GWTMDQVVAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDVAETIVMNLLRG 184
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T ++T I R KP KY YEKEI+ YA++K+L YFSTECIYSP A+RG
Sbjct: 185 DLPRLARSTNIVTESSASDIKRSKPLKYAYEKEIVL-YAHYKKLCYFSTECIYSPEAFRG 243
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLE++RP +ILDI++SGE+
Sbjct: 244 SARTLIKDLEKVRPSSILDIVRSGEDM 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+ G CERCGY++SQ+ CKAC+LLEGLN+ P+ I
Sbjct: 355 KLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTI 392
>gi|330921640|ref|XP_003299506.1| hypothetical protein PTT_10510 [Pyrenophora teres f. teres 0-1]
gi|311326790|gb|EFQ92397.1| hypothetical protein PTT_10510 [Pyrenophora teres f. teres 0-1]
Length = 440
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/353 (52%), Positives = 235/353 (66%), Gaps = 25/353 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN +A + RPK ++C+ CF VFE EIH I N LF+ GE++AIGASGGKDST
Sbjct: 6 CALCNVNRALILRPKDHSKLCKTCFISVFETEIHHTITTNALFQRGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QYG+ L I+ Y +LYG
Sbjct: 66 VLASVLKTLNERYDYGLDLILLSIDEGIKGYRDDSLETVKRNAEQYGMELTILGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + I R KP KY YEKEI+ YA+ K LDYFSTECIY
Sbjct: 186 LPRLSRTTSIITSTPSASANPASNTNIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
SP A+RG AR IK+LER+RP AILD+++SGE+ + +P G + CG + S
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM----AKLVP--GNDQACGGMCSSSIP 298
Query: 307 KA------CVLLEGLNRGLPKMGIVRSRGQNNERTKD--MKQNKGTKNIESKQ 351
A C +G + G M V +R + NE D ++ K++ KQ
Sbjct: 299 AAEEEEGGCGSAQGRSTG-GDMASVEARLRMNEAAADSNLETEITAKSVSGKQ 350
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ CKACVLLEGLN+ PK I
Sbjct: 382 GQCKRCGYLSSQDICKACVLLEGLNKSRPKNKI 414
>gi|452000959|gb|EMD93419.1| hypothetical protein COCHEDRAFT_1154013 [Cochliobolus
heterostrophus C5]
Length = 442
Score = 356 bits (914), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 204/274 (74%), Gaps = 10/274 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ +A + RPK ++C+ CF VFE EIH I N LF GE++AIGASGGKDST
Sbjct: 6 CALCSVNRALILRPKDHSRLCKTCFIAVFETEIHHTITTNSLFHRGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL I+ Y +LYG
Sbjct: 66 VLASVLKTLNERYDYGLDLILLSIDEGIKGYRDDSLETVKRNAQQYDMPLTILGYAELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGAS L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGASRLGVKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + I R KP KY YEKEI+ YA+ K LDYFSTECIY
Sbjct: 186 LPRLSRTTSIVTSTPSASSDPASNTNIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
SP A+RG AR IK+LER+RP AILD+++SGE+
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM 278
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C +CGY+SSQ+ CKACVLLEGLN+ PK I
Sbjct: 384 GQCSKCGYLSSQEVCKACVLLEGLNKARPKNKI 416
>gi|451854797|gb|EMD68089.1| hypothetical protein COCSADRAFT_79173 [Cochliobolus sativus ND90Pr]
Length = 442
Score = 356 bits (913), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 204/274 (74%), Gaps = 10/274 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ +A + RPK ++C+ CF VFE EIH I N LF GE++AIGASGGKDST
Sbjct: 6 CALCSVNRALILRPKDHSRLCKMCFIAVFETEIHHTITTNSLFHCGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QY +PL I+ Y +LYG
Sbjct: 66 VLASVLKTLNERYDYGLDLILLSIDEGIKGYRDDSLETVKRNAQQYDMPLTILGYAELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGAS L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGASRLGVKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + I R KP KY YEKEI+ YA+ K LDYFSTECIY
Sbjct: 186 LPRLSRTTSIVTSTPSASSDPASNTNIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
SP A+RG AR IK+LER+RP AILD+++SGE+
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM 278
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 266 RPRAILDIIKSGENFRISTSTKMPEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
+P + + + ++ T K +Q G C +CGY+SSQ+ CKACVLLEGLN+ PK
Sbjct: 356 KPDGAVPLPNGKKAKKVYTPKKTNKQVMGQCSKCGYLSSQEVCKACVLLEGLNKARPKNK 415
Query: 324 I 324
I
Sbjct: 416 I 416
>gi|396493152|ref|XP_003843966.1| hypothetical protein LEMA_P016170.1 [Leptosphaeria maculans JN3]
gi|312220546|emb|CBY00487.1| hypothetical protein LEMA_P016170.1 [Leptosphaeria maculans JN3]
Length = 534
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/274 (61%), Positives = 207/274 (75%), Gaps = 10/274 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A + RPK ++C+ CF VFE EIH I N+LF GE+IAIGASGGKDST
Sbjct: 6 CALCKVNRALILRPKDHSKLCKTCFITVFETEIHHTITTNRLFTRGEKIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN+R++YGLDL LLSIDEGI GYRDDSL+TVKRN QYG+ L I+ Y++LYG
Sbjct: 66 VLASVLKTLNKRYDYGLDLILLSIDEGIKGYRDDSLETVKRNAEQYGMELTILGYEELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + + R KP KY YEKEI+ YA+ K+LDYFSTECIY
Sbjct: 186 LPRLSRTTSIITSTPSASSDPASNTNVRRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
SP A+RG AR IK+LER+RP AILD+++SGE+
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM 278
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C++CGY+SSQ CKACVLLEGLN+ PK I
Sbjct: 374 GQCKKCGYLSSQDVCKACVLLEGLNKARPKQQI 406
>gi|169607112|ref|XP_001796976.1| hypothetical protein SNOG_06610 [Phaeosphaeria nodorum SN15]
gi|111065321|gb|EAT86441.1| hypothetical protein SNOG_06610 [Phaeosphaeria nodorum SN15]
Length = 437
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 170/274 (62%), Positives = 204/274 (74%), Gaps = 10/274 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C+ +A + RPK ++C+ CF VFE EIH I N LF GERIAIGASGGKDST
Sbjct: 6 CALCHTNRALILRPKDHSKLCKACFITVFETEIHHTITTNALFTRGERIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YGLDL LLSIDEGI GYRDDSL+TVKRN QYG+ L I+ Y +LYG
Sbjct: 66 VLASVLKTLNERYDYGLDLVLLSIDEGIKGYRDDSLETVKRNAEQYGMDLTILGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGVKHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITT---------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+ RLSR T I T + I R KP KY YEKEI+ YA+ K LDYFSTECIY
Sbjct: 186 LPRLSRTTSIITSTPSASSDPASNTNIKRSKPLKYAYEKEIVL-YAHHKSLDYFSTECIY 244
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
SP A+RG AR IK+LER+RP AILD+++SGE+
Sbjct: 245 SPEAFRGSARALIKNLERVRPSAILDVVRSGEDM 278
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 275 KSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K G R ST M G C+ CGY+SSQ CKACVLL GLN+ PK I
Sbjct: 360 KKGFTPRKSTKQVM---GQCKICGYLSSQDVCKACVLLGGLNKARPKNKI 406
>gi|406699201|gb|EKD02412.1| hypothetical protein A1Q2_03304 [Trichosporon asahii var. asahii
CBS 8904]
Length = 350
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 197/245 (80%), Gaps = 6/245 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-----GNQLFKAGERIAIGASG 70
CS C +A +KRPKT +Q+C++CF++VFE E+H+ I G +F+ GER+AIGASG
Sbjct: 5 CSICESARALVKRPKTGQQVCKQCFFDVFETEVHETITKSGAGGGSIFERGERVAIGASG 64
Query: 71 GKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSY 130
GKDSTVLA VL+ LN+R++YGLDL LLSIDEGI GYRDDSL+TVK+N+ +YGLPLKI+SY
Sbjct: 65 GKDSTVLAHVLTTLNQRYDYGLDLHLLSIDEGIKGYRDDSLETVKQNQAEYGLPLKILSY 124
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+LYGWTMD +V +G KNNCTFCGVFRRQALDRGA+ L ++ I TGHNADDIAETVL+N
Sbjct: 125 DELYGWTMDRVVDQVGKKNNCTFCGVFRRQALDRGAAELGIEHIVTGHNADDIAETVLMN 184
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
ILRGD+ARL RCT +TT D I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP
Sbjct: 185 ILRGDVARLGRCTAVTTQGDDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPEG 243
Query: 251 YRGFA 255
G A
Sbjct: 244 SGGSA 248
>gi|401888139|gb|EJT52104.1| hypothetical protein A1Q1_06642 [Trichosporon asahii var. asahii
CBS 2479]
Length = 350
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 197/245 (80%), Gaps = 6/245 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-----GNQLFKAGERIAIGASG 70
CS C +A +KRPKT +Q+C++CF++VFE E+H+ I G +F+ GER+AIGASG
Sbjct: 5 CSICESARALVKRPKTGQQVCKQCFFDVFETEVHETITKSGAGGGSIFERGERVAIGASG 64
Query: 71 GKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSY 130
GKDSTVLA VL+ LN+R++YGLDL LLSIDEGI GYRDDSL+TVK+N+ +YGLPLKI+SY
Sbjct: 65 GKDSTVLAHVLTTLNQRYDYGLDLHLLSIDEGIKGYRDDSLETVKQNQAEYGLPLKILSY 124
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+LYGWTMD +V +G KNNCTFCGVFRRQALDRGA+ L ++ I TGHNADDIAETVL+N
Sbjct: 125 DELYGWTMDRVVDQVGKKNNCTFCGVFRRQALDRGAAELGIEHIVTGHNADDIAETVLMN 184
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
ILRGD+ARL RCT +TT D I R KPFKY YEKEI+ YAYFK+L YFSTECIYSP
Sbjct: 185 ILRGDVARLGRCTAVTTQGDDTIKRSKPFKYAYEKEIVM-YAYFKKLTYFSTECIYSPEG 243
Query: 251 YRGFA 255
G A
Sbjct: 244 SGGGA 248
>gi|453085524|gb|EMF13567.1| adenine nucleotide alpha hydrolases-like protein [Mycosphaerella
populorum SO2202]
Length = 431
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 15/277 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN+ +A + RPK +IC CF ++FE E+ + + + LF GER+AIGASGGKDS
Sbjct: 5 ICEICNETRAQILRPKNHSRICAPCFIQIFETEVAETVTSSNLFVPGERVAIGASGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA VL LN RHN+ LDL LLSIDEGI+GYRD SL+ VKR+ QY LPLKIVSY++LY
Sbjct: 65 TVLASVLKTLNDRHNWQLDLVLLSIDEGITGYRDHSLEAVKRHAQQYDLPLKIVSYQELY 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW+MD++V +G K NCT+CGVFRRQALDRGA++L V + TGHNADD+AETVL+N+LRG
Sbjct: 125 GWSMDQVVAQVGKKGNCTYCGVFRRQALDRGAAMLDVGHVVTGHNADDVAETVLMNLLRG 184
Query: 195 DIARLSRCTLITT---------GEDGP-----IPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+ RLSR T I T E G + R KP Y YEKEI+ YA+ K+LDYF
Sbjct: 185 DLPRLSRATSIITSTPSASVTKSEGGKVNFTDVKRSKPLMYAYEKEIVL-YAHHKKLDYF 243
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSG 277
STECIYSP A+RG AR IK+LER+RP +ILD+++SG
Sbjct: 244 STECIYSPEAFRGSARTLIKNLERIRPESILDVVRSG 280
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P+Q G CERCGY+SSQ+ CKACVLLEGLN+ P+ I
Sbjct: 387 PKQKLGQCERCGYLSSQQICKACVLLEGLNKARPRTEI 424
>gi|452984641|gb|EME84398.1| hypothetical protein MYCFIDRAFT_203006 [Pseudocercospora fijiensis
CIRAD86]
Length = 440
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/276 (58%), Positives = 205/276 (74%), Gaps = 15/276 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +A + RPK +IC CF ++FE+E+ + + ++LF+ GE++AIGASGGKDST
Sbjct: 6 CQICQKARAQILRPKNHARICAPCFIQIFEDEVAETVESSKLFQPGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R N+GLDL LLS+DEGI GYRD SL+ VKR+ QY LPLKIVSY +LYG
Sbjct: 66 VLASVLKTLNDRQNWGLDLILLSVDEGIQGYRDHSLEAVKRHAEQYQLPLKIVSYAELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+MD++V +G K NCT+CGVFRRQALDRGA++L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WSMDQVVAQVGKKGNCTYCGVFRRQALDRGAAMLNVGHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTG---------EDGP-----IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+ RLSR T I T E+G + R KP Y YEKEI+ YA+ K+LDYFS
Sbjct: 186 LPRLSRATSIITSTPSAKAPQTENGEVNFTNVKRSKPLMYAYEKEIVL-YAHHKKLDYFS 244
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSG 277
TECIYSP A+RG AR IK+LER+RP +ILD+++SG
Sbjct: 245 TECIYSPEAFRGSARTLIKNLERIRPESILDVVRSG 280
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIV 325
G CERCGY+SSQ CKACVLLEGLN+ P+ I
Sbjct: 401 GQCERCGYLSSQAVCKACVLLEGLNKARPRTEIT 434
>gi|398406108|ref|XP_003854520.1| hypothetical protein MYCGRDRAFT_69570 [Zymoseptoria tritici IPO323]
gi|339474403|gb|EGP89496.1| hypothetical protein MYCGRDRAFT_69570 [Zymoseptoria tritici IPO323]
Length = 437
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 211/294 (71%), Gaps = 16/294 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK +IC CF +FE+E + I+ +LF+ GE++AIGASGGKDST
Sbjct: 6 CEICKTARAQIVRPKNHARICAPCFTAIFEDETAETIISTKLFERGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R+++GLDL LLS+DEGI+GYRD SL+ VKR+ QY LPLKIVSY +LYG
Sbjct: 66 VLASVLKTLNDRYDWGLDLVLLSVDEGITGYRDHSLEAVKRHSAQYDLPLKIVSYAELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+MD++V IG K NCT+CGVFRRQALDRGAS+L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WSMDQVVAQIGKKGNCTYCGVFRRQALDRGASMLGVGHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLI---------TTGEDGP-----IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+ RL R T I TG+DG + R KP Y YEKEI+ YA+ K+LDYFS
Sbjct: 186 LPRLGRATSIITSTPSAKAATGKDGEVGITNVKRSKPLMYAYEKEIVL-YAHHKKLDYFS 244
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGTC 294
TEC+YSP A+RG AR IK+LER+RP +ILD+++SG + ++ + +G C
Sbjct: 245 TECLYSPEAFRGSARTLIKNLERIRPESILDVVRSGIDMAKLVPNADASNKGAC 298
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRG 329
P+Q G+CERCGY+SSQ CKACVLLEGLN+ P+ I S G
Sbjct: 395 PKQILGSCERCGYLSSQAVCKACVLLEGLNKARPRTEIEVSGG 437
>gi|452843340|gb|EME45275.1| hypothetical protein DOTSEDRAFT_71097 [Dothistroma septosporum
NZE10]
Length = 437
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 200/276 (72%), Gaps = 15/276 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +A + RPK +IC CF ++FE+E+ + + LF +GE++AIGASGGKDST
Sbjct: 6 CEICKSARAQILRPKNHARICSTCFIQIFEDEVAEAVTTANLFHSGEKVAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN RHN+ LDL LLSIDEGI+GYRD SL+ VKR+ QY LPLKIVSY +LYG
Sbjct: 66 VLASVLKTLNDRHNWELDLILLSIDEGITGYRDHSLEAVKRHAAQYDLPLKIVSYAELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+MD++V +G K NCT+CGVFRRQALDRGA++L V + TGHNADD+AETVL+N+LRGD
Sbjct: 126 WSMDQVVAQVGKKGNCTYCGVFRRQALDRGAAMLNVGHVVTGHNADDVAETVLMNLLRGD 185
Query: 196 IARLSRCTLITTGEDGP--------------IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+ RLSR T I T + R KP Y YEKEI+ YA+ K+LDYFS
Sbjct: 186 LPRLSRATSIVTSTPSAKAIETTGRSLSFTNVKRSKPLMYAYEKEIVL-YAHHKKLDYFS 244
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSG 277
TECIYSP A+RG AR IK+LER+RP +ILD+++SG
Sbjct: 245 TECIYSPEAFRGSARTLIKNLERIRPESILDVVQSG 280
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P+Q G CERCGY+SSQ CKACVLLEGLN+ P+ I
Sbjct: 394 PKQKLGQCERCGYLSSQAVCKACVLLEGLNKARPRTEI 431
>gi|449301738|gb|EMC97747.1| hypothetical protein BAUCODRAFT_104479 [Baudoinia compniacensis
UAMH 10762]
Length = 446
Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 204/282 (72%), Gaps = 15/282 (5%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
G LC CN+ +A + RPK +IC CF ++FE E + I+ LF+ GERIAIGASGGK
Sbjct: 3 GALCEACNRNRAQILRPKNHARICAPCFIDIFEAETAETILSTNLFQRGERIAIGASGGK 62
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA VL LN R + LDL LLSIDEGI+GYRD SL+ VKRN + LPLKIVSY++
Sbjct: 63 DSTVLALVLKTLNDRFAWDLDLVLLSIDEGITGYRDHSLEAVKRNSAELDLPLKIVSYEE 122
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
LYGW+MD++V IG K NCT+CGVFRRQALDRGA++L V + TGHNADD+AETVL+N+L
Sbjct: 123 LYGWSMDQVVSQIGKKGNCTYCGVFRRQALDRGAAMLGVGHVVTGHNADDVAETVLMNLL 182
Query: 193 RGDIARLSRCTLI-TTGEDGPIP-------------RCKPFKYTYEKEIMFTYAYFKRLD 238
RGD+ RLSR T I T+ +P R KP Y YEKEI+ YA+ K+LD
Sbjct: 183 RGDLPRLSRATSIETSTPSAAMPKQRLNGASFTNVKRSKPLMYAYEKEIVL-YAHHKKLD 241
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
YFSTECIYSP A+RG AR IK+LER+RP +ILDI++SG +
Sbjct: 242 YFSTECIYSPEAFRGSARTLIKNLERIRPESILDIVRSGADM 283
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Query: 289 PEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
P+Q G CERCGY+SSQ CKACVLLEGLN+ P+ GI
Sbjct: 397 PKQRLGQCERCGYLSSQAICKACVLLEGLNKARPRTGI 434
>gi|345566580|gb|EGX49522.1| hypothetical protein AOL_s00078g11 [Arthrobotrys oligospora ATCC
24927]
Length = 348
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 202/267 (75%), Gaps = 3/267 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKA-GERIAIGASGGKDS 74
C+ C +A + RPK ++IC+ CF EVFE E+H IV N +F + GER+AIGASGGKDS
Sbjct: 4 CAICQNNRAQVIRPKNGQKICKNCFLEVFELEVHTTIVENNIFPSRGERVAIGASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA L LN R++YG++ LLSIDEGI GYRDDSL+TVKRN IQY + L IV Y LY
Sbjct: 64 TVLAATLKALNERYDYGVEFVLLSIDEGIHGYRDDSLETVKRNAIQYEMELCIVGYDALY 123
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V+ +G K NCT+CGVFRRQALDRGA L + I TGHNADDIAETVL+N+LRG
Sbjct: 124 GWTMDKVVEKVGRKGNCTYCGVFRRQALDRGAKRLNISHILTGHNADDIAETVLMNLLRG 183
Query: 195 DIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL RC I T P+ R KP KY YEKEI+ YA+++ LDYFSTEC+YSP A+RG
Sbjct: 184 DLPRLGRCAEIMTASLTSPMRRSKPLKYAYEKEIVL-YAHYRELDYFSTECVYSPEAFRG 242
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR +K+LE++RP ++LDI++SGE
Sbjct: 243 NARSLLKELEKIRPSSVLDIVRSGEQL 269
>gi|452825507|gb|EME32503.1| hypothetical protein Gasu_02780 [Galdieria sulphuraria]
Length = 350
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 226/323 (69%), Gaps = 12/323 (3%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLCS C + A + + + +CR CF+E FE+ +H+ IV L + GERIAIGASGGKD
Sbjct: 3 RLCSHCGKSFANILVGREDKYLCRCCFFEYFEDTVHRTIVEECLLQPGERIAIGASGGKD 62
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA+VL LN R+ Y DL+LLSIDEGI GYRDDSL+TV++N Y LPL +SY +L
Sbjct: 63 STVLAYVLKLLNERYYYNWDLWLLSIDEGIQGYRDDSLRTVEQNRDDYNLPLYTLSYSEL 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMD++V IG K+NCTFCGVFRRQALD+G ++ + +ATGHNADDIAET+LLN+LR
Sbjct: 123 YNWTMDQVVSQIGRKSNCTFCGVFRRQALDKGTEKIQANVLATGHNADDIAETILLNLLR 182
Query: 194 GDIARLSRCTL-------ITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
GD AR SR + ++ D I R KP K YEKEI+ YAYFK+L YF+TECI
Sbjct: 183 GDHARFSRSVMEENANYRMSIDSDSKKIRRVKPLKRVYEKEIVM-YAYFKKLKYFATECI 241
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS-TKMPEQGTCERCGYISSQK 304
Y+P AYRG ARE++K LER+RP +I DI+ S + S T++ +Q C RCG ISSQ
Sbjct: 242 YAPFAYRGHAREYLKSLERIRPHSISDILYSLSCISLEDSKTRVGQQ--CIRCGSISSQN 299
Query: 305 WCKACVLLEGLNRGLPKMGIVRS 327
CKAC+L L+RG + + RS
Sbjct: 300 ICKACLLRTSLDRGQGVLAVKRS 322
>gi|320592099|gb|EFX04538.1| pp-loop ATPase superfamily [Grosmannia clavigera kw1407]
Length = 377
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/253 (64%), Positives = 192/253 (75%), Gaps = 3/253 (1%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+H I +LF GE++AIGASGGKDSTVLA VL LN RH YGLDL LLS+DEGI GY
Sbjct: 7 EVHHTITSARLFYPGEKVAIGASGGKDSTVLASVLKTLNERHKYGLDLVLLSVDEGIKGY 66
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
RDDSL+TVKRN QY +PLKIV Y +LYGWTMD++V+ IG K NCT+CGVFRRQALDRGA
Sbjct: 67 RDDSLETVKRNAEQYEMPLKIVGYGELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGA 126
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED-GPIPRCKPFKYTYEK 225
LL + + TGHNADD+AETVL+N+LRGD+ RLSR T I TG D + R KP KY YEK
Sbjct: 127 KLLGIRHVVTGHNADDVAETVLMNLLRGDLPRLSRSTSIVTGGDHSEVKRSKPLKYAYEK 186
Query: 226 EIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
EI+ YA+ K+LDYFSTECIYSP A+RG AR IK+LE++RP AILDI++SGE+
Sbjct: 187 EIVL-YAHHKKLDYFSTECIYSPEAFRGSARSLIKNLEKVRPSAILDIVRSGEDMARLVP 245
Query: 286 TKMPEQGTCERCG 298
P Q +C G
Sbjct: 246 GAAP-QSSCACAG 257
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
GTCERCGY+SSQ C+AC+LLEGLN+ P + I
Sbjct: 345 GTCERCGYMSSQAICQACMLLEGLNKNRPHISI 377
>gi|407919916|gb|EKG13136.1| tRNA(Ile)-lysidine/2-thiocytidine synthase [Macrophomina phaseolina
MS6]
Length = 422
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 202/283 (71%), Gaps = 15/283 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A + RPK +++C+ CF EVFE EIH I LF+ GE+IAIGASGGKDST
Sbjct: 6 CALCQHNRALILRPKNHQKLCKACFLEVFETEIHHTITSTNLFQRGEKIAIGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL LN R++YG++L LLSIDEGI GYRDDSL+TVKRN +QY +PL IV Y +LYG
Sbjct: 66 VLASVLKVLNERYDYGVELILLSIDEGIKGYRDDSLETVKRNALQYDMPLTIVGYDELYG 125
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD++V+ +G K NCT+CGVFRRQALDRGA+ L V + TGHNADD+AETVL+N
Sbjct: 126 WTMDQVVEQVGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMN----- 180
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
R T + I R KP KY YEKEI+ YA+ K LDYFSTECIYSP A+RG A
Sbjct: 181 -----RSDSTTIVDHSNIKRSKPLKYAYEKEIVL-YAHHKNLDYFSTECIYSPEAFRGSA 234
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCG 298
R IK+LER+RP AILD+++SGE+ + +P G + CG
Sbjct: 235 RALIKNLERVRPSAILDVVRSGEDM----AKLVPGAGGDKACG 273
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 283 STSTKMPEQ--GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR-GQNNERT 335
S ++P+Q G C +CGYISSQ CKAC LL+GLN+ PK + SR G +ER
Sbjct: 354 SGPKRLPKQTMGNCAKCGYISSQTVCKACTLLDGLNKNRPKTAVEASRAGDEDERA 409
>gi|402470973|gb|EJW04929.1| TIGR00269 family protein [Edhazardia aedis USNM 41457]
Length = 307
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 220/310 (70%), Gaps = 11/310 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C K L RP +++C+ CF EVFE+E+H+ I+ N LF E+IA+ SGGKDST
Sbjct: 3 CEICKSAKVVLIRPSNKKKLCKSCFLEVFEKEVHKTIIENNLFTKNEKIAVAISGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA++L+ LN+++NYG++LFLL +DEGI+ YRD S++TVK+N+ Y LPLKIVSY++ +
Sbjct: 63 VLAYILNLLNKKYNYGVELFLLCVDEGITNYRDHSIETVKKNQEDYHLPLKIVSYQEYFN 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMD IV+ IG K+NCT+CG+ RRQAL++GA L V +I TGHNADD+AET+L+N+LRGD
Sbjct: 123 ITMDAIVQKIGRKSNCTYCGILRRQALEKGAQNLGVSQIVTGHNADDMAETILMNLLRGD 182
Query: 196 IARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
RL R +LI + +G IPR KPFK+ +EKEI+ Y++++ L YFSTEC YSP AYRG
Sbjct: 183 FNRLYRSSLIKSISNGFNIPRSKPFKFMFEKEIVM-YSFYRNLHYFSTECCYSPGAYRGH 241
Query: 255 AREFIKDLERLRPRAILDIIKSG---ENFRISTSTKMPEQGTCERCGYISSQK--WCKAC 309
AR FIK+LER PR IL+II S EN ++ T C++C +S K CKAC
Sbjct: 242 ARLFIKELERKNPRIILNIINSCDDLENLDVTNRTIFK----CKKCLSFTSLKSNICKAC 297
Query: 310 VLLEGLNRGL 319
LL +N L
Sbjct: 298 ELLNTINETL 307
>gi|402591437|gb|EJW85366.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Wuchereria
bancrofti]
Length = 249
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 196/250 (78%), Gaps = 1/250 (0%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+H VI LF G++IA+GASGGKDSTVL VL++LN++H+YGLD+ LLS+DEGI+GY
Sbjct: 1 EVHNVIKSYGLFGKGKKIAVGASGGKDSTVLIHVLNKLNQKHDYGLDIILLSVDEGITGY 60
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
R +SL+ V+RN YGLPL ++SYK LYGWTMDEIV +G +NNCTFCGVFRR+ALDRGA
Sbjct: 61 RGESLKAVERNRNDYGLPLVVMSYKQLYGWTMDEIVSAVGARNNCTFCGVFRRRALDRGA 120
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ IATGHNADD+AETVLLNILRGD+ARL RCT I TG +G +PR KP KY +EK+
Sbjct: 121 IECGANIIATGHNADDMAETVLLNILRGDLARLQRCTDIVTGLEGCLPRTKPLKYVFEKD 180
Query: 227 IMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST 286
I+ YA+F RLDYFSTEC Y+P+++R R ++K LERL+P+AILD+I+SGE +
Sbjct: 181 IVM-YAHFNRLDYFSTECRYAPDSFRNHVRMYVKKLERLQPKAILDLIRSGETISARSGV 239
Query: 287 KMPEQGTCER 296
+P TCER
Sbjct: 240 SLPSLTTCER 249
>gi|358253287|dbj|GAA52758.1| cytoplasmic tRNA 2-thiolation protein 1 [Clonorchis sinensis]
Length = 1408
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 180/220 (81%), Gaps = 1/220 (0%)
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DSTVLA+V+ LN RH+YG +L LLSIDEGISGYRD+SL+TVKRN++QY LPL I+SY+D
Sbjct: 974 DSTVLAYVMKLLNERHHYGAELLLLSIDEGISGYRDESLETVKRNQMQYDLPLTILSYED 1033
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
L+GW+MD IV+ +G K NCTFCG+FRRQALD+GA +L+ KI TGHNADD+AETVL+NIL
Sbjct: 1034 LFGWSMDAIVQKVGNKRNCTFCGIFRRQALDKGAVMLQATKICTGHNADDVAETVLMNIL 1093
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
RGDI RL RCT I TG DG +PR KPFKYTYEKEI+ YA LDYFSTEC Y+PNAYR
Sbjct: 1094 RGDIGRLKRCTAIVTGCDGVLPRFKPFKYTYEKEIVM-YARLHNLDYFSTECKYAPNAYR 1152
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
G+AR F+KDLER RPRAILDII SGE IS K+P Q
Sbjct: 1153 GYARTFLKDLERFRPRAILDIIHSGEQMAISQDVKVPVQA 1192
>gi|149236786|ref|XP_001524270.1| VEG136 protein [Lodderomyces elongisporus NRRL YB-4239]
gi|226711426|sp|A5E3Q3.1|CTU1_LODEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|146451805|gb|EDK46061.1| VEG136 protein [Lodderomyces elongisporus NRRL YB-4239]
Length = 379
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 221/360 (61%), Gaps = 39/360 (10%)
Query: 3 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG 61
V S +KK LC C+ RKA +KRPK L ++C+ECF+ VFE E+H IV N+LF
Sbjct: 2 VESSNTKKVKVSSLCELCHGRKAVMKRPKNLRKLCKECFFHVFETEVHNTIVENKLFANV 61
Query: 62 ER--------IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQT 113
E +AIGASGGKDSTVLA V+ LN R+NYGL L LL IDEGI GYRD SL+T
Sbjct: 62 ENSEFPERRAVAIGASGGKDSTVLASVMKTLNERYNYGLKLVLLCIDEGIKGYRDHSLET 121
Query: 114 VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
VK N+ +Y +PL+I+SYKDLY WTMDE+V G++++CT+CGV RRQALD+GA L ++
Sbjct: 122 VKMNQKEYDMPLEILSYKDLYDWTMDEVVSCAGIRSSCTYCGVLRRQALDKGAEKLGINH 181
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYA 232
I TGHNADD+AETVLLN+LRGDI R+ T +IT E+ I R KPF Y +KEI+ YA
Sbjct: 182 IVTGHNADDMAETVLLNLLRGDINRIENSTKIITDSENSVIQRSKPFAYMSQKEIVL-YA 240
Query: 233 YFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR----------- 281
++K L YFSTEC YS A+RG R L + P + I SG+ F+
Sbjct: 241 HYKNLTYFSTECTYSEEAFRGECRSLFHSLSAVLPSVHTNTIYSGQQFKRKAKAMKRQNN 300
Query: 282 -----------------ISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
+ + + E C++CG ++S C+AC LL GL K+ I
Sbjct: 301 KNNKNNKNNMADEHEVLPNGTVAIKESKRCKKCGSLASNDLCQACFLLAGLEVSRAKVSI 360
>gi|429962914|gb|ELA42458.1| TIGR00269 family protein [Vittaforma corneae ATCC 50505]
Length = 321
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 221/314 (70%), Gaps = 13/314 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN KA + R K+ +++C+ECFYE FE EIHQ++V + +F+ R+ IG SGGKDS
Sbjct: 2 VCEYCNVAKAVILRSKSRKKVCKECFYEQFENEIHQLVVESAMFEKNSRVGIGISGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA+VL++LN ++NYGLDL LL +DEGISGYRD S++TV N+ + L+ VSYK+++
Sbjct: 62 TVLAYVLNKLNIKYNYGLDLVLLCVDEGISGYRDKSIETVLENQKILNMKLETVSYKEMF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TMDE+V+ G K NCT+CGVFRRQAL+ A LKVD I TGHNADD+AETVLLN RG
Sbjct: 122 GMTMDEVVQKTGRKGNCTYCGVFRRQALEEAARRLKVDCIVTGHNADDMAETVLLNFYRG 181
Query: 195 DIARLSRCTLITTGE---------DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
DI+RL RC L T E + RCKPFKYTY++EI+F YAYFK+L YF+TEC
Sbjct: 182 DISRLKRCALSKTKEHISDENTKKHLSLARCKPFKYTYQREIVF-YAYFKKLPYFTTECT 240
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCG--YISSQ 303
Y+ A RG RE +KDLER+ P I++IIKSGE F T T + + C RC S+
Sbjct: 241 YASGASRGDFRELVKDLERIDPTIIINIIKSGEMFLEDTPTNLIIK-KCLRCKNPTSSAD 299
Query: 304 KWCKACVLLEGLNR 317
+ C AC ++E L+R
Sbjct: 300 QICNACSMVEKLSR 313
>gi|348559266|ref|XP_003465437.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cavia
porcellus]
Length = 359
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 217/317 (68%), Gaps = 9/317 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDST
Sbjct: 6 CASCHTARAALRRPRSGQALCGPCFCTAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R GL L L+++DEGI GYRD +L V+R ++GLPL IV+Y+DL+G
Sbjct: 66 VLAHVLRELAPR--LGLTLRLVAVDEGIGGYRDAALAAVRRQAERWGLPLTIVAYEDLFG 123
Query: 136 -WTMDEIVKVIGL----KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA L+ + TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGTGRGRSCCTFCGVLRRRALEEGARLVGATHVVTGHNADDVAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD ARL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAARLARGGGLGSAGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPR 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG ARE +K LE +RP A LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARELLKRLEAVRPTAALDLVHSAERLALAPAVRPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVR 326
LL+GL RG P++ I R
Sbjct: 303 ALLDGLARGRPRLAIGR 319
>gi|21704170|ref|NP_663557.1| cytoplasmic tRNA 2-thiolation protein 1 [Mus musculus]
gi|81879991|sp|Q99J10.1|CTU1_MOUSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|13543164|gb|AAH05752.1| ATP binding domain 3 [Mus musculus]
gi|74199268|dbj|BAE33164.1| unnamed protein product [Mus musculus]
Length = 420
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 218/319 (68%), Gaps = 9/319 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C +C++ +AAL+RP++ + +C CF FE E+ ++ L G +A+GASGGKDST
Sbjct: 6 CFSCHKTRAALRRPRSGQALCGSCFCAAFEAEVLHTVLAGHLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+G
Sbjct: 66 VLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R ++ +TGE +PRC+P ++ +KE++ YA+F+ L YFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGVLGSTGEGCALPRCRPLQFASQKEVVL-YAHFRHLRYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + K P GTC RCG ++S K C+AC
Sbjct: 243 AFRGHARDLLKLLEAARPSAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRGLP++ I + R
Sbjct: 303 ALLDGLNRGLPRLAIGKGR 321
>gi|148690725|gb|EDL22672.1| ATP binding domain 3 [Mus musculus]
Length = 430
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 218/319 (68%), Gaps = 9/319 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C +C++ +AAL+RP++ + +C CF FE E+ ++ L G +A+GASGGKDST
Sbjct: 16 CFSCHKTRAALRRPRSGQALCGSCFCAAFEAEVLHTVLAGHLLPPGAVVAVGASGGKDST 75
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+G
Sbjct: 76 VLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFG 133
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 134 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 193
Query: 191 ILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R ++ +TGE +PRC+P ++ +KE++ YA+F+ L YFS EC+Y+P
Sbjct: 194 FLRGDAGRLARGGVLGSTGEGCALPRCRPLQFASQKEVVL-YAHFRHLRYFSEECVYAPE 252
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + K P GTC RCG ++S K C+AC
Sbjct: 253 AFRGHARDLLKLLEAARPSAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQAC 312
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRGLP++ I + R
Sbjct: 313 ALLDGLNRGLPRLAIGKGR 331
>gi|157819969|ref|NP_001099721.1| cytoplasmic tRNA 2-thiolation protein 1 [Rattus norvegicus]
gi|226711429|sp|B1WBV0.1|CTU1_RAT RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|149056111|gb|EDM07542.1| ATP binding domain 3 (predicted) [Rattus norvegicus]
gi|171847383|gb|AAI61898.1| ATP binding domain 3 [Rattus norvegicus]
Length = 382
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 219/319 (68%), Gaps = 9/319 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C +C++ +AAL+RP++ + +C CF FE E+ + ++ L G +A+GASGGKDST
Sbjct: 6 CFSCHKARAALRRPRSGQALCGPCFCAAFEAEVLRTVLAGHLLPQGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+G
Sbjct: 66 VLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R ++ +TGE +PRC+P ++ +KE++ YA+F+ L YFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGVLGSTGEGCALPRCRPLQFASQKEVVL-YAHFRHLRYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + K P GTC RCG ++S K C+AC
Sbjct: 243 AFRGHARDLLKLLEAARPSAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASNKLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRGLP++ I + R
Sbjct: 303 ALLDGLNRGLPRLAIGKGR 321
>gi|291416188|ref|XP_002724329.1| PREDICTED: cytosolic thiouridylase subunit 1 homolog [Oryctolagus
cuniculus]
Length = 446
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 218/338 (64%), Gaps = 13/338 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C + +AAL+RP++ + +C CF FE E+ + ++ +L G +A+GASGGKDST
Sbjct: 6 CASCGKARAALRRPRSGQALCGACFCAAFEAEVLRTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R GL L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+G
Sbjct: 66 VLAHVLRALAPR--LGLALHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD ARL+R + + +G +PRC+P + +KE++ YA+ +RLDYFS EC+Y+P
Sbjct: 184 FLRGDAARLARGGGLGSRGEGGALPRCRPLQLASQKEVVL-YAHSRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP +LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSVVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNI 347
LL+GLNRG P++ I G+ E D + G +
Sbjct: 303 ALLDGLNRGRPRLAI----GKGREGKPDALREPGAVEV 336
>gi|323348754|gb|EGA82995.1| Ncs6p [Saccharomyces cerevisiae Lalvin QA23]
Length = 274
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/254 (58%), Positives = 191/254 (75%), Gaps = 10/254 (3%)
Query: 80 VLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMD 139
+L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMD
Sbjct: 1 MLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMD 60
Query: 140 EIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARL 199
EIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILRGD+ARL
Sbjct: 61 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 120
Query: 200 SRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREF 258
+ T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+RG ARE+
Sbjct: 121 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFRGTAREY 179
Query: 259 IKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQKWCKACV 310
+K+LE +RP I+DII+SGEN + K + C RCGY+SS CKAC+
Sbjct: 180 MKNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACM 239
Query: 311 LLEGLNRGLPKMGI 324
LLEGL + ++ I
Sbjct: 240 LLEGLEKSRAQVAI 253
>gi|334328516|ref|XP_001378316.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Monodelphis domestica]
Length = 355
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 211/314 (67%), Gaps = 8/314 (2%)
Query: 22 RKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL 81
R AAL+RP+T +CR CF FE E+ + +L G +A+GASGGKDSTVLA VL
Sbjct: 14 RPAALRRPRTGGAVCRSCFCSAFEAEVLSTLQTGRLLPPGAVVAVGASGGKDSTVLAHVL 73
Query: 82 SELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDE 140
L+ RH+ GLDL L+++DEGI GYRD +L V+R ++ LPL +V+Y +L+ GWTMDE
Sbjct: 74 QILDARHSLGLDLRLVAVDEGIGGYRDAALAAVRRQAARWRLPLTVVAYVELFGGWTMDE 133
Query: 141 IVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + + CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N LRGD
Sbjct: 134 VARRAAQEPGRARACCTFCGVLRRRALEEGAQRVGATHIVTGHNADDMAETVLMNFLRGD 193
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
RL+R TL + GE G +PRC+P ++ +KEI+ YA+F+ LDYFS EC+Y+P A+RG
Sbjct: 194 AGRLARGGTLGSPGEGGALPRCRPLQFASQKEIVL-YAHFQELDYFSEECVYAPEAFRGH 252
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
R+ +K LE RP +LD++ S E ++ + + P G C RCG ++S+ C+AC LL+G
Sbjct: 253 VRDLLKALEAARPSVVLDLVHSAERLALAPAARPPPPGACTRCGALASRSLCQACALLDG 312
Query: 315 LNRGLPKMGIVRSR 328
LNRG P++ I + R
Sbjct: 313 LNRGRPRLAIGKGR 326
>gi|19173081|ref|NP_597632.1| similarity to HYPOTHETICAL PROTEIN YGW1_yeast [Encephalitozoon
cuniculi GB-M1]
gi|19168748|emb|CAD26267.1| similarity to HYPOTHETICAL PROTEIN YGW1_yeast [Encephalitozoon
cuniculi GB-M1]
gi|449330146|gb|AGE96409.1| hypothetical protein ECU03_1240 [Encephalitozoon cuniculi]
Length = 317
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 213/311 (68%), Gaps = 11/311 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA + RP+ ++C+ CF + FE ++H+ IV + +F+ G+RI IG SGGKDST
Sbjct: 3 CMVCGISKAIIVRPRGKNKVCKTCFLDGFEADVHETIVASGMFQKGDRIGIGVSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LNR+H YG++L LLS+DEGI GYRD S+++V RN G+ L+IVS++D++G
Sbjct: 63 VLAYVLDLLNRKHGYGVELVLLSVDEGIVGYRDQSIESVCRNSKDLGIKLRIVSFEDVFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMD +V+ IG ++NCT+CGVFRRQAL++ A + VD IATGHNADD+AETVLLN+LRGD
Sbjct: 123 VTMDRVVQKIGRRSNCTYCGVFRRQALEKAAREMGVDAIATGHNADDMAETVLLNVLRGD 182
Query: 196 IARLSRCTLITT----GEDG---PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
I+RL RCTL T G DG + R KPFK Y+KEI+ YA+ ++L+YFSTEC YSP
Sbjct: 183 ISRLRRCTLAKTKEQKGGDGKAMSLSRLKPFKNIYQKEIVL-YAFHRKLEYFSTECTYSP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK--WC 306
A RG R IK LE+ P I+D+I+SG+ R + C C + +S C
Sbjct: 242 GASRGDLRMLIKQLEKEDPGIIMDVIRSGDMLRQEECMGRAPR-PCVLCAHSTSSDNGIC 300
Query: 307 KACVLLEGLNR 317
CVL+E L +
Sbjct: 301 NGCVLVEKLEQ 311
>gi|297462107|ref|XP_002701984.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|297485927|ref|XP_002695276.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|296477390|tpg|DAA19505.1| TPA: cytoplasmic tRNA 2-thiolation protein 1-like [Bos taurus]
Length = 347
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 215/319 (67%), Gaps = 9/319 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDST
Sbjct: 6 CASCHKARAALRRPRSGQALCGACFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + + CTFCGV RR+AL+ GA L+ + TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKMLEAARPSAVLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRG P++ I + R
Sbjct: 303 ALLDGLNRGRPRLAIGKGR 321
>gi|387594030|gb|EIJ89054.1| hypothetical protein NEQG_00873 [Nematocida parisii ERTm3]
Length = 307
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/305 (51%), Positives = 208/305 (68%), Gaps = 7/305 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A RP T ++C++CF E+++H I ++FK R+ IG SGGKDST
Sbjct: 3 CNECKIQPAITIRPSTKMKLCKKCFVRSIEDQVHSTIKETEMFKGTTRLIIGVSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA +L+ LN+RH YGL+L LL IDEGISGYRD S++ V NE +PLKI+SY ++YG
Sbjct: 63 VLAHILNILNKRHQYGLELRLLCIDEGISGYRDKSIEVVHTNEKDLMIPLKIMSYDEIYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+TMD++V IG K+NCT+CGVFRR AL+ GA LL D IATGHNADDIAET+LLN RGD
Sbjct: 123 YTMDKVVDKIGRKSNCTYCGVFRRGALEDGAKLLNGDMIATGHNADDIAETILLNYFRGD 182
Query: 196 IARLSRCT--LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ RL +C + T IPRCKP YEKEI+ YA++ L YFSTEC YSP A+RG
Sbjct: 183 MNRLVKCAHPITQTTSKDVIPRCKPLADVYEKEIVM-YAFYNNLPYFSTECKYSPGAFRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS--QKWCKACVL 311
+AR +IK LE+ P++IL IIKSG++ + + E C+ CG S + CK+C+L
Sbjct: 242 YARTYIKALEKTNPQSILKIIKSGKH--VQKHSHQMESHPCKECGKNCSGAEGVCKSCLL 299
Query: 312 LEGLN 316
L+ L+
Sbjct: 300 LKSLS 304
>gi|118151018|ref|NP_001071422.1| cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|122145554|sp|Q0VC66.1|CTU1_BOVIN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|111305255|gb|AAI20330.1| ATP binding domain 3 [Bos taurus]
gi|296477482|tpg|DAA19597.1| TPA: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
Length = 347
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 215/319 (67%), Gaps = 9/319 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDST
Sbjct: 6 CASCHKARAALRRPRSGQALCGSCFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + + CTFCGV RR+AL+ GA L+ + TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKMLEAARPSAVLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSR 328
LL+GLNRG P++ I + R
Sbjct: 303 ALLDGLNRGRPRLAIGKGR 321
>gi|378755964|gb|EHY65989.1| ATP-binding domain-containing protein 3 [Nematocida sp. 1 ERTm2]
Length = 306
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 207/305 (67%), Gaps = 7/305 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN++ A RP T ++C+ CF + E+++H I +FK + + +G SGGKDST
Sbjct: 3 CNECNKQPAITIRPSTKTKLCKRCFIQSIEDQVHTTIQETDMFKDVKTLVVGVSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA +L+ LN+RH Y LDL LL IDEGISGYRD S++ V NE +PLKI+SY D+YG
Sbjct: 63 VLAHILNILNKRHCYNLDLRLLCIDEGISGYRDKSIEVVHINEKDLSIPLKIMSYNDIYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+TMD +V IG KNNCT+CGVFRR AL+ GA LLK D IATGHNADDIAET+LLN LRGD
Sbjct: 123 YTMDAVVTKIGRKNNCTYCGVFRRGALEDGAKLLKGDMIATGHNADDIAETILLNYLRGD 182
Query: 196 IARLSRCT--LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ RL +C + T IPRCKP YEKEI+ YA++ L YFSTEC YSP A+RG
Sbjct: 183 MNRLVKCAHPITLTSSKEVIPRCKPLAGLYEKEIVM-YAFYNNLPYFSTECKYSPGAFRG 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS--QKWCKACVL 311
R +IK LE++ +AIL IIKSG+ + ++ + CE CG S + CK+C+L
Sbjct: 242 HVRTYIKALEKINSQAILKIIKSGKC--VQKNSYHMDSKACEVCGKNCSGAEGVCKSCIL 299
Query: 312 LEGLN 316
L+ L+
Sbjct: 300 LKSLS 304
>gi|396081114|gb|AFN82733.1| Adenine nucleotide alpha hydrolase [Encephalitozoon romaleae
SJ-2008]
Length = 314
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 215/312 (68%), Gaps = 11/312 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C CN +A + R K ++C+ CF+E FE ++H+ IV + +F+ G+++ IG SGGKDS
Sbjct: 2 VCVRCNTSQAIVIRAKDRAKVCKSCFFEGFEVDVHETIVSSGMFRKGDKVGIGMSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA+VL LN+RH YG++L LL +DEGI+GYRD S+ +V +N + GL LKIVS+++ +
Sbjct: 62 TVLAYVLDLLNKRHGYGVELVLLGVDEGITGYRDQSIMSVCKNSSRLGLKLKIVSFEETF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TMD++V+ +G + NCT+CGVFRRQAL+ A + VD I TGHNADD+AETVLLNI+RG
Sbjct: 122 GTTMDKVVRKVGRRGNCTYCGVFRRQALEDAARKMGVDVIVTGHNADDMAETVLLNIVRG 181
Query: 195 DIARLSRCTLITT----GEDG---PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
DI+RL RCTL T EDG + R KPFK+ Y+KEI+ YA+ K+L+YFSTEC YS
Sbjct: 182 DISRLRRCTLARTKPQRSEDGRMISLSRLKPFKHIYQKEIVL-YAFHKKLEYFSTECTYS 240
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK--W 305
P A RG R +K LER P+ ILD+I+SG+ + ST C CG+ +S +
Sbjct: 241 PGASRGDLRVLMKQLEREDPKVILDVIRSGDIIQQEDSTHRSPI-PCVLCGHSTSSRDAI 299
Query: 306 CKACVLLEGLNR 317
C C L+ L +
Sbjct: 300 CNGCTLVRRLKQ 311
>gi|303388765|ref|XP_003072616.1| Adenine nucleotide alpha hydrolase [Encephalitozoon intestinalis
ATCC 50506]
gi|303301757|gb|ADM11256.1| Adenine nucleotide alpha hydrolase [Encephalitozoon intestinalis
ATCC 50506]
Length = 316
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 215/315 (68%), Gaps = 13/315 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +A + RPK ++C+ CF+ FEE++H+ I +++FK G++I IG SGGKDST
Sbjct: 3 CTRCGVSQAIVIRPKDKSKVCKACFFNGFEEDVHETITSSKMFKEGDKIGIGVSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN+RH YG++L LLS+DEGI+GYRD S++TV +N +GL L+IVS+++++G
Sbjct: 63 VLAYVLDLLNKRHKYGIELILLSVDEGIAGYRDHSIETVCKNSKSFGLKLRIVSFEEIFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMD I G + NCT+CGVFRRQAL+ A + VD IATGHNADD+AETVLLN++RGD
Sbjct: 123 VTMDGIAHKTGKRGNCTYCGVFRRQALEEAAREMGVDMIATGHNADDMAETVLLNVIRGD 182
Query: 196 IARLSRCTLITTGE----DGPI---PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
I+RL RCT T E DG + R KPFK+ Y+KEI+ YA++K+L+YFSTEC YS
Sbjct: 183 ISRLGRCTREKTKEQKNGDGKVISLSRLKPFKHIYQKEIVL-YAFYKKLEYFSTECTYSF 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST-KMPEQGTCERCGYISSQ--KW 305
A RG R +K LER PR IL++I+SG+ + + P G C CG+ +S
Sbjct: 242 GASRGDLRMLVKQLEREDPRVILEVIRSGDLLQQKECMDRTP--GECVMCGHSTSSGDTI 299
Query: 306 CKACVLLEGLNRGLP 320
C C L++ L P
Sbjct: 300 CNGCTLIKRLGNTKP 314
>gi|402906506|ref|XP_003916040.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Papio anubis]
Length = 348
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 9/346 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHASRAALRRPRSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALTPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTL 355
LL+GLNRG P++ I + R +E + SK T
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEAMPGTPGDPARAPTSKAVPTF 348
>gi|302565142|ref|NP_001181634.1| cytoplasmic tRNA 2-thiolation protein 1 [Macaca mulatta]
Length = 348
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 9/346 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHASRAALRRPRSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALTPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARTPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTL 355
LL+GLNRG P++ I + R +E + SK T
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEAMPGTPGDPARVPTSKAVPTF 348
>gi|222537719|ref|NP_660275.2| cytoplasmic tRNA 2-thiolation protein 1 [Homo sapiens]
gi|74713747|sp|Q7Z7A3.1|CTU1_HUMAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cancer-associated gene protein; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|31075485|gb|AAP42277.1| cancer-associated gene protein [Homo sapiens]
gi|119592390|gb|EAW71984.1| ATP binding domain 3 [Homo sapiens]
gi|158255782|dbj|BAF83862.1| unnamed protein product [Homo sapiens]
Length = 348
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 224/345 (64%), Gaps = 14/345 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRS-RGQNNERTK----DMKQNKGTKNIES 349
LL+GLNRG P++ I + RG + E T D + +K + +
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEATPGTPGDPARPPASKAVPT 347
>gi|410220520|gb|JAA07479.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
gi|410263066|gb|JAA19499.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
gi|410291644|gb|JAA24422.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
Length = 348
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 224/345 (64%), Gaps = 14/345 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRS-RGQNNERTK----DMKQNKGTKNIES 349
LL+GLNRG P++ I + RG + E T D + +K + +
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEATPGTPGDPARPPASKAVPT 347
>gi|14290537|gb|AAH09037.1| ATP binding domain 3 [Homo sapiens]
Length = 348
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 220/346 (63%), Gaps = 9/346 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA V L R G+ L L+++DEGI GYRD +L V+R +++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVRRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAVRWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTL 355
LL+GLNRG P++ I + R +E + SK T
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEATPGTPGDPARPPASKAVPTF 348
>gi|401825795|ref|XP_003886992.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
gi|392998149|gb|AFM98011.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
Length = 314
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 212/312 (67%), Gaps = 17/312 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN +A + R K ++C+ CF++ FE ++H+ I + + + G+R+ +G SGGKDST
Sbjct: 3 CMRCNMSQAIVIRAKDRTKVCKSCFFKGFEADVHETITSSGMLRKGDRVGVGMSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL LN+RH YG++L LLS+DEGI+GYRD S+ +V +N + GL LKIVS+++L+G
Sbjct: 63 VLAYVLDLLNKRHGYGVELVLLSVDEGIAGYRDQSIVSVCKNSARLGLELKIVSFEELFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMD +V+ IG K NCT+CGVFRRQAL+ A + V+ IATGHNADD+AETVLLNI+RGD
Sbjct: 123 TTMDNVVQKIGRKGNCTYCGVFRRQALEDAAKRMGVNVIATGHNADDVAETVLLNIIRGD 182
Query: 196 IARLSRCTLITT-------GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
I+RL RCTL T GE + R KPFK+ Y+KEI+ YA+ K+L+YFSTEC YS
Sbjct: 183 ISRLRRCTLAKTRPQSNGKGEMMSLSRLKPFKHIYQKEIVL-YAFHKKLEYFSTECTYSL 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFR---ISTSTKMPEQGTCERCGYISSQK- 304
A RG R +K LER P+ IL++I+SG+ + + T +P C CG+ +S
Sbjct: 242 GASRGDLRMLVKQLEREDPKVILNVIRSGDMLQEEEPAHRTPVP----CTLCGHSTSSHD 297
Query: 305 -WCKACVLLEGL 315
C C L+ L
Sbjct: 298 AICNGCTLVRKL 309
>gi|324512165|gb|ADY45046.1| Cytoplasmic tRNA 2-thiolation protein 1 [Ascaris suum]
Length = 234
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 146/225 (64%), Positives = 179/225 (79%), Gaps = 2/225 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN AA+K + +CRECF E+FE +H+ IV ++FK GE++AIGASGGKDST
Sbjct: 4 CSKCNN-IAAVKYSRNGNPVCRECFIELFELNVHETIVKCEIFKRGEKVAIGASGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA++L+ LN+R++YG++L LLSIDEGI GYRDDSL+ V+RN +QYGLPL +SYKDLYG
Sbjct: 63 VLAYLLNTLNKRYDYGVELLLLSIDEGIQGYRDDSLKAVERNRLQYGLPLTTLSYKDLYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMDEIV IG KNNCTFCGVFRRQALDRGA +L +K+ TGHNADD+AETVL+N+LRGD
Sbjct: 123 WTMDEIVAKIGTKNNCTFCGVFRRQALDRGALMLGANKLVTGHNADDMAETVLMNLLRGD 182
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
IARL RC I TG D +PR KP KYT EK+I+ YA+FK+ F
Sbjct: 183 IARLQRCATIVTGSDDCLPRAKPLKYTLEKDIVM-YAHFKKTRLF 226
>gi|326475107|gb|EGD99116.1| PP-loop ATPase superfamily protein [Trichophyton tonsurans CBS
112818]
Length = 402
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/267 (56%), Positives = 185/267 (69%), Gaps = 27/267 (10%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +A + RPK ++C++CF +FE E N +R
Sbjct: 5 LCFNCKAARAVIIRPKNRHKLCKDCFLTIFETE-------NSSNNHKQR----------- 46
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+ LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN IQY +PL+IVSY +LY
Sbjct: 47 -------ATLNERYNYGLDLVLLSIDEGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELY 99
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD+AETV++N+LRG
Sbjct: 100 GWTMDQVVAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRG 159
Query: 195 DIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL+R T I TG I R KP KY YEKEI+ YA+ K+LDYFSTECIYSP A+RG
Sbjct: 160 DLPRLARSTSIITGSAASDIKRSKPLKYAYEKEIVL-YAHHKKLDYFSTECIYSPEAFRG 218
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF 280
AR IKDLER+RP AILDI++SGE+
Sbjct: 219 SARTLIKDLERIRPSAILDIVRSGEDM 245
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPK 321
G CE+CGY+SSQK CKAC+LLEGLN+ PK
Sbjct: 344 GQCEKCGYMSSQKICKACMLLEGLNKSRPK 373
>gi|145550491|ref|XP_001460924.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428755|emb|CAK93527.1| unnamed protein product [Paramecium tetraurelia]
Length = 244
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/237 (62%), Positives = 183/237 (77%), Gaps = 7/237 (2%)
Query: 91 GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN 150
G L+LLSIDEGI GYRDDSL+TVK+N+I Y L LKI+SYK+L+ W+MDE+V IGL NN
Sbjct: 2 GCHLYLLSIDEGIKGYRDDSLETVKQNQITYDLDLKILSYKELFNWSMDEVVAQIGLNNN 61
Query: 151 CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED 210
CT+CGVFRRQALDRGA L VDKI TGHNADD+AET L+N+LRGDI RL + T I TG+D
Sbjct: 62 CTYCGVFRRQALDRGAIQLGVDKIITGHNADDMAETFLMNLLRGDIFRLPKSTAIITGDD 121
Query: 211 G-----PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERL 265
G +PRCKPFKYTYEKEI+ YA++K+L YFSTEC YSPNA+RG RE IK+LE +
Sbjct: 122 GDNGIATLPRCKPFKYTYEKEIVM-YAHYKKLIYFSTECTYSPNAFRGHVRELIKNLEAI 180
Query: 266 RPRAILDIIKSGENFRI-STSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPK 321
RP A++D+I S E + + K+P++ C++C +SS K CKAC LLE LN+G K
Sbjct: 181 RPSAVIDLIHSCEQLDAPNQNQKIPQKQLCQKCNLLSSNKICKACTLLESLNQGRAK 237
>gi|389584692|dbj|GAB67424.1| PP-loop family protein [Plasmodium cynomolgi strain B]
Length = 394
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 214/323 (66%), Gaps = 25/323 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ + +P +++CR+CF E FEE++H+ I+ +F ++I I SGGKDS+
Sbjct: 11 CEECGEKNVCMMKPSNRKKLCRDCFTEGFEEDVHETILKKNMFDEKDKICIAVSGGKDSS 70
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL + R+HNY DLFLL+IDEGI GYRDDSL+ V + + +Y LPLK++ ++D++
Sbjct: 71 VLAHVLVHIKRKHNYKWDLFLLAIDEGIKGYRDDSLKIVFKLQEKYNLPLKVLKFEDIFT 130
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++MD +V IG KNNCT CGVFRRQA++RGA L K+ TGHNADD+AET+L+N+ RGD
Sbjct: 131 YSMDTVVSFIGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNADDLAETILMNMCRGD 190
Query: 196 IARLSR-CTLITTGEDGP----------------------IPRCKPFKYTYEKEIMFTYA 232
+ +L++ ++ G+ G + + +P + YEKEI+ YA
Sbjct: 191 LEKLAKGVDAMSAGKMGTSEVGKEAVGKEAVGKEAVEKEEMEKGEPLMWCYEKEIVL-YA 249
Query: 233 YFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
++K+LDYFSTEC YSPN++RG R FIKDLE + P+ I++II S E F ++S + Q
Sbjct: 250 FYKKLDYFSTECTYSPNSFRGNLRSFIKDLEMINPQFIVNIIHSSEFFYHNSSRRKVLQ- 308
Query: 293 TCERCGYISSQKWCKACVLLEGL 315
C RCG +S CKAC+++EGL
Sbjct: 309 MCTRCGAYTSNPVCKACLIVEGL 331
>gi|429964875|gb|ELA46873.1| TIGR00269 family protein [Vavraia culicis 'floridensis']
Length = 326
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 216/332 (65%), Gaps = 35/332 (10%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C++ K +KRPK +C+ CF+ +FE E+H+ IV N+ F GE++ + SGGKDS
Sbjct: 2 LCDLCSRDKPVIKRPKNGTMVCKSCFFALFEAEVHETIVQNEFFFRGEKVLVAVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA+V+S LN RH+YG++L L+ +DEGI GYRD SL+TVK+N+ Y L L+IVS+K+L+
Sbjct: 62 TVLAYVMSLLNDRHDYGINLHLVCVDEGIKGYRDHSLETVKQNKEDYNLELEIVSFKELF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
TMDE+++ + +CT+CGVFRRQAL+ GA + KI TGHNADD+AETV+LN+LRG
Sbjct: 122 NLTMDEVMQKKRM-GSCTYCGVFRRQALEEGARRIGATKIITGHNADDMAETVILNLLRG 180
Query: 195 DIARLSRCTLITTGED------------------------GPIPRCKPFKYTYEKEIMFT 230
D RL RCT T + + R KPFKY YEKEI+F
Sbjct: 181 DFNRLKRCTAAKTKRNVSSEVCIEDMGKGCGCSNEQNVGSTSLVRVKPFKYIYEKEIVF- 239
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMP 289
YAY K L YFSTECIYSP A+R +AR F++ L+ P I+++IKSGE R T++++
Sbjct: 240 YAYLKNLKYFSTECIYSPGAHREYARMFLRSLD---PELIMNVIKSGEFLERSDTNSRV- 295
Query: 290 EQGTCERCGYISSQ--KWCKACVLLEGLNRGL 319
C CG ++S K CKACVLL L L
Sbjct: 296 --WNCVLCGKMTSSAAKKCKACVLLNSLQNML 325
>gi|114678754|ref|XP_001174153.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Pan
troglodytes]
Length = 348
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 223/345 (64%), Gaps = 14/345 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L TV+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALATVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+ ++ +KE++ YA F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRQLQFASQKEVVL-YAQFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRS-RGQNNERTK----DMKQNKGTKNIES 349
LL+GLNRG P++ I + RG + E T D + +K + +
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEATPGTPGDPARPPASKAVPT 347
>gi|47202707|emb|CAF87749.1| unnamed protein product [Tetraodon nigroviridis]
Length = 254
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 193/310 (62%), Gaps = 65/310 (20%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS+C ++A LKRPKT +C++CF+ FEEE+HQ IV +LFK GE + I ASGGKDS
Sbjct: 4 LCSSCVDKRAVLKRPKTGHSLCKDCFFWAFEEEVHQTIVAAELFKHGETVGIAASGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVLA V+ LN R+NYGL L LLS+DEGI+GYRDDS++TVKRN+ QY LPLKIV +
Sbjct: 64 TVLAHVMKLLNERYNYGLTLMLLSVDEGITGYRDDSVETVKRNQQQYELPLKIVVLRG-- 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+ L N C R+A GHNADD+AETVL+N+LR
Sbjct: 122 ---------ALWLDNGC------HREA---------------GHNADDVAETVLMNVLRA 151
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ DG +PRCKP KY YEKEI+ YAYFK
Sbjct: 152 ------------SEGDGVVPRCKPLKYAYEKEIVL-YAYFK------------------- 179
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
+ F+KDLE +RP +I+D+I SGEN + KMP QGTC RCGYISSQ CK+CVLLEG
Sbjct: 180 -KTFLKDLESVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLLEG 238
Query: 315 LNRGLPKMGI 324
LNRGLPK+GI
Sbjct: 239 LNRGLPKLGI 248
>gi|300707175|ref|XP_002995807.1| hypothetical protein NCER_101213 [Nosema ceranae BRL01]
gi|239605025|gb|EEQ82136.1| hypothetical protein NCER_101213 [Nosema ceranae BRL01]
Length = 311
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 203/311 (65%), Gaps = 11/311 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA + R K ++C+ECFY +FE +IH I + +F G + IG SGGKDST
Sbjct: 3 CEICKIHKAIILRSKDRTKVCKECFYMLFENDIHNTITESSMFAKGSTVGIGISGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA+VL +LN+++NY L L LL IDEGI GYRD S+ TV N L L+++S+ DL+G
Sbjct: 63 VLAYVLDKLNKKYNYELKLVLLCIDEGIKGYRDYSIDTVHENSKDLNLKLQVLSFDDLFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
MD +V+ +G +NNCT+CGVFRRQAL+ A VD I TGHNADD+AETVLLN++RGD
Sbjct: 123 VNMDSVVQKVGKRNNCTYCGVFRRQALEEAARKCSVDYIVTGHNADDMAETVLLNLIRGD 182
Query: 196 IARLSRCTLITTG----EDG---PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
I RL CT T +DG +PR KPFK TY+KEI+ YA+ K+L YFSTEC Y+P
Sbjct: 183 INRLYGCTNPVTNKHITDDGFVISLPRTKPFKNTYQKEIVL-YAFHKKLKYFSTECTYAP 241
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS--QKWC 306
A RG+ R FIK+LE++ AI +IIKSG+ I T+ + C +C + +S + C
Sbjct: 242 EASRGYVRNFIKELEKIDSTAIYNIIKSGDQL-IKTNNTSSKAFPCVQCSHPTSSQNQIC 300
Query: 307 KACVLLEGLNR 317
K C + L +
Sbjct: 301 KGCSFVAQLKK 311
>gi|449676950|ref|XP_004208745.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like, partial
[Hydra magnipapillata]
Length = 203
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 171/205 (83%), Gaps = 6/205 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A LKRPK +++CRECFY+VFEEEIH+ IV N+LF G+ +AIGASGGKDST
Sbjct: 5 CMLCEKR-AVLKRPKNGKKLCRECFYKVFEEEIHEAIVTNELFVPGDTVAIGASGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA ++ LN R+NYGL+L LLSIDEGI+GYRDDSL+TVKRN++QY +PLKI+SYK+LYG
Sbjct: 64 VLAHIMKTLNERYNYGLNLVLLSIDEGITGYRDDSLETVKRNQVQYDIPLKILSYKELYG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
WTMD+IVK +G KNNCTFCGVFRRQALDRGA L+K +KI TGHNADD+AETVL+NILRGD
Sbjct: 124 WTMDDIVKHVGRKNNCTFCGVFRRQALDRGAMLVKANKIVTGHNADDVAETVLMNILRGD 183
Query: 196 IARLSRCTLITTGEDGPIPRCKPFK 220
IARL RCT I T + RC +K
Sbjct: 184 IARLQRCTAIKT-----VCRCFVYK 203
>gi|297705651|ref|XP_002829685.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Pongo abelii]
Length = 348
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 9/346 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPRSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+G
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCGTL 355
LL+GLNRG P++ I + R +E + SK T
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLDEEATPGTPGDPVRPPASKAVPTF 348
>gi|209875951|ref|XP_002139418.1| PP-loop family protein [Cryptosporidium muris RN66]
gi|209555024|gb|EEA05069.1| PP-loop family protein [Cryptosporidium muris RN66]
Length = 348
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 208/333 (62%), Gaps = 35/333 (10%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R ++R ++ + C+ CF FEEE+H+ I ++F GE +AIG SGGKDS+
Sbjct: 6 CYICGDR-PVMRRCESGQLNCKYCFLSAFEEEVHEYITSYKMFSPGEVVAIGISGGKDSS 64
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL V+ ELN+R YGLDL L++IDEGI GYRDD+L+ V + Y LPL I+ ++DL+G
Sbjct: 65 VLLNVMYELNKRKEYGLDLRLVAIDEGIKGYRDDALKVVNFQKDYYDLPLTILQFQDLFG 124
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMD+I G N+CTFCGVFRR++LD G +L DK+ TGHNADD AETVLLNILRGD
Sbjct: 125 TTMDDIRLKAGKSNSCTFCGVFRRRSLDVGGNLSGADKLCTGHNADDAAETVLLNILRGD 184
Query: 196 IARLSRCT----------------LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
+ RL RCT ++ G IPR KP Y +EKEI+ YAY+ L Y
Sbjct: 185 LNRLQRCTNPITSTEIKQSQDNEVVMGLGTLRSIPRVKPLMYCFEKEIVL-YAYYSNLRY 243
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS------TSTKMPEQGT 293
FSTEC YS +AYRGFAREFI+ +E ++ + + + I++ ENF I+ +ST +
Sbjct: 244 FSTECKYSVDAYRGFAREFIRQIEGIKCKYVTNFIRAAENFNIAAINRDKSSTNENKNNL 303
Query: 294 -----------CERCGYISSQKWCKACVLLEGL 315
C CGY+SS + CK C+LLE L
Sbjct: 304 PRIYAQQVVQRCTLCGYMSSARVCKGCLLLETL 336
>gi|395862052|ref|XP_003803283.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Otolemur
garnettii]
Length = 348
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 224/345 (64%), Gaps = 14/345 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L +A+GASGGKDST
Sbjct: 6 CTSCHAARAALRRPRSGQALCGACFCAAFEAEVLHTVLAGRLLPPNAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL+ R G+ L L+++DEGI GYRD +L VKR ++ LPL IV+Y DL+G
Sbjct: 66 VLAHVLRELSPR--LGISLHLVAVDEGIGGYRDAALAAVKRQAARWELPLTIVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A+RG AR+ +K LE RP A+LD++ S E + + + P G+C RCG ++S+ C+AC
Sbjct: 243 AFRGHARDLLKRLEAARPSAVLDLVHSAERLALVPAARPPRPGSCSRCGALASRDLCQAC 302
Query: 310 VLLEGLNRGLPKMGIVRS-RGQNNERTK----DMKQNKGTKNIES 349
LL+GLNRG P++ I + RG E + D Q ++ I +
Sbjct: 303 ALLDGLNRGRPRLAIGKGRRGLGEEGPQGAPGDRAQPPASETIPA 347
>gi|403222372|dbj|BAM40504.1| uncharacterized protein TOT_020000759 [Theileria orientalis strain
Shintoku]
Length = 391
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/316 (48%), Positives = 201/316 (63%), Gaps = 16/316 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ CN R A ++R T C++CF E FE ++ I N L G+R+ IG SGGKDS
Sbjct: 3 LCTNCNSRNAVVRRSFTGHFNCKQCFIESFETGVYNYITSNNLISDGDRVCIGVSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VL VL + R+N +L+LL+IDEGI GYRDDSL V +Y + LK++++KD Y
Sbjct: 63 SVLTHVLFTIKNRYNLNWNLYLLAIDEGIKGYRDDSLLIVDHLYDKYKIELKVLNFKDTY 122
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TMD++V +IG KNNCT CG FRRQ L+ GA L + + TGHNADD+AETVLLN+ RG
Sbjct: 123 GLTMDQVVALIGKKNNCTICGSFRRQILEIGARLFDANVLCTGHNADDMAETVLLNLFRG 182
Query: 195 DIARLSRCTLITTGE-----DGP--------IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
D+ +L+ + +GP + R KP KYT+EKEI+ YA F L YFS
Sbjct: 183 DLYKLTTSINNVNNDTDRRANGPKVTVPVTKLKRIKPLKYTFEKEIVM-YARFLSLKYFS 241
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-TCERCGYI 300
TECIYSP AYRG R FIK+LE + P+ IL+II SG+ F S T + G TC +CG
Sbjct: 242 TECIYSPEAYRGHMRSFIKNLEIINPKIILNIIHSGDRF-FSDYTPVDNSGNTCIKCGIG 300
Query: 301 SSQKWCKACVLLEGLN 316
+ + CK CV++E LN
Sbjct: 301 NVKNICKPCVIVEQLN 316
>gi|401842645|gb|EJT44765.1| NCS6-like protein, partial [Saccharomyces kudriavzevii IFO 1802]
Length = 224
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC C+ RKA +KRPK L ++C++CF VFE EIH IV N LF+ GERIA+GASGGKD
Sbjct: 20 QLCELCHSRKALIKRPKNLSKLCKQCFCLVFETEIHNTIVTNSLFQRGERIAVGASGGKD 79
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
STVLA +L LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDL
Sbjct: 80 STVLAHMLKLLNDRHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYGLPLEIFSFKDL 139
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILR
Sbjct: 140 YDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILR 199
Query: 194 GDIARLSRCTLITTGEDG-PIPRCK 217
GD+ARL + T I T G PI R K
Sbjct: 200 GDVARLEKSTAIITQSSGSPIKRSK 224
>gi|207345529|gb|EDZ72322.1| YGL211Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 205
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 167/204 (81%), Gaps = 2/204 (0%)
Query: 80 VLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMD 139
+L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMD
Sbjct: 1 MLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMD 60
Query: 140 EIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARL 199
EIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILRGD+ARL
Sbjct: 61 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 120
Query: 200 SRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREF 258
+ T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+RG ARE+
Sbjct: 121 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFRGTAREY 179
Query: 259 IKDLERLRPRAILDIIKSGENFRI 282
+K+LE +RP I+DII+SGEN I
Sbjct: 180 MKNLEAVRPSCIIDIIQSGENLGI 203
>gi|71031446|ref|XP_765365.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352321|gb|EAN33082.1| hypothetical protein, conserved [Theileria parva]
Length = 376
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 221/348 (63%), Gaps = 17/348 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A L+R + C+ CF E FE +I++ I+ ++L +G+R+ +G SGGKDS+
Sbjct: 4 CEYCFEGSAVLRRSFSGLPSCKNCFIESFENDIYEYIMRDKLISSGDRVCVGVSGGKDSS 63
Query: 76 VLAFVLSELNRRHNYGLD--LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA VLS++ + YGLD L+LL +DEGI GYRDDSL+ VK +Y + LKI+S+K+
Sbjct: 64 VLAHVLSKI--KETYGLDWNLYLLGVDEGIKGYRDDSLKVVKSMHDKYKIELKILSFKER 121
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G++MD++VK+IG K NCT CG FRRQ L+ GA + + + + TGHNADD+AETVLLN+ R
Sbjct: 122 FGFSMDQVVKLIGKKGNCTVCGSFRRQMLEIGARIFEANVLCTGHNADDMAETVLLNLFR 181
Query: 194 GDIARL-------SRCTLITTGEDGP---IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
GD+ +L S T+ T E I R KP KY++EKEI+ YA + LDYFSTE
Sbjct: 182 GDLLKLTSNSNSPSDTTVDNTSESVNKVRIRRVKPLKYSFEKEIVL-YARYLSLDYFSTE 240
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS--TKMPEQGTCERCGYIS 301
CIYSP AYRG R FIK+LE + P+ IL+II+SG+NF+ ++ + C+ CG S
Sbjct: 241 CIYSPEAYRGHMRSFIKNLELINPQIILNIIRSGDNFKSDHRGIGEVTGRNYCQICGIDS 300
Query: 302 SQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIES 349
CK C +++ L+ GI G++ N+G ++ES
Sbjct: 301 VNNICKPCKIVQQLHTLNGLNGINDKSGKDEFDDSGTSVNEGVVDLES 348
>gi|123508298|ref|XP_001329605.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912651|gb|EAY17470.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 328
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 206/327 (62%), Gaps = 8/327 (2%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C++ KA LKR +T ++C+ECF +FEEE+++ L + G+ + IG SGGKDS
Sbjct: 3 LCENCHKNKANLKRFETGMKVCKECFAYLFEEEVYETCTKYNLIQPGDVVGIGVSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
T L VL +N+RHN G + ++ IDEGI GYRD++L+ VK N+ +YGLP I+ + +L+
Sbjct: 63 TCLLHVLHTINQRHNMGFQIHMICIDEGIVGYRDNALEAVKFNKEKYGLPCTIIPFNELF 122
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW +D+I K K CT+CG+FRR++LD A+ + +K+A GHNA+D+AETVLLN+LRG
Sbjct: 123 GWNLDDIYKATHTKETCTYCGIFRRRSLDIAAARVGANKVAVGHNANDVAETVLLNVLRG 182
Query: 195 DIARLSRCTLITTG------EDGPI-PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
DI R R I T E+G + PR KPF + +++I+ Y +F+ L Y++ EC Y+
Sbjct: 183 DINRFGRSVDIKTDGISSNVEEGTVAPRIKPFAFQTQRDIVL-YVHFQNLRYYAVECPYA 241
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
A+R F+RE++ + E+ P + II+ ++ + P G CE+CG S+ K C
Sbjct: 242 VTAFRRFSREYLVEKEKTDPGVMRRIIEGSIKYQNQFEKEAPNIGFCEKCGAPSNHKICM 301
Query: 308 ACVLLEGLNRGLPKMGIVRSRGQNNER 334
AC L++ L PK+ +V + N +
Sbjct: 302 ACNLIQRLADAHPKVQVVEDSEKQNTK 328
>gi|221058074|ref|XP_002261545.1| PP-loop family protein [Plasmodium knowlesi strain H]
gi|194247550|emb|CAQ40950.1| PP-loop family protein, putative [Plasmodium knowlesi strain H]
Length = 404
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 201/349 (57%), Gaps = 62/349 (17%)
Query: 28 RPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRR 87
+P ++CRECF E FEE++H IV +F ++I I SGGKDS+VLA VL + R+
Sbjct: 2 KPSNRRKLCRECFTECFEEDVHATIVKKNMFHDKDKICIAVSGGKDSSVLAHVLVHIKRK 61
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL 147
+NY DLFLL+IDEGI GYRDDSL+ V + + +Y LPLK++ ++D++ +TMD +V IG
Sbjct: 62 YNYKWDLFLLAIDEGIKGYRDDSLKIVFKLQEKYNLPLKVLKFEDIFTYTMDTVVSFIGK 121
Query: 148 KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR------ 201
KNNCT CGVFRRQA++RGA L K+ TGHNADD+AET+L+N+ RGD+ +L++
Sbjct: 122 KNNCTVCGVFRRQAMERGALLFNATKLVTGHNADDLAETILMNMCRGDLEKLAKGVDSMS 181
Query: 202 --------------------------CTLITTGEDGPIPRCKP----------------- 218
T + G P P
Sbjct: 182 EMKMGTSEMEKAKFGACCGGECTGGEATAVEPGHRSPSSTGNPDALIGGPPSTHVESAPP 241
Query: 219 -----FKYTYEKEIMFTY-------AYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLR 266
F K +M+ Y A++K+LDYFSTEC YSPN++RG R FIKDLE +
Sbjct: 242 EEEHTFFLPRLKPLMWCYEKEIVLYAFYKKLDYFSTECTYSPNSFRGNLRSFIKDLEMIN 301
Query: 267 PRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
P+ IL+II S E F ++S + Q C RCG +S CKAC+++EGL
Sbjct: 302 PQFILNIIHSSEFFYHNSSRRKVLQ-VCTRCGVYTSNPVCKACLIVEGL 349
>gi|429328143|gb|AFZ79903.1| hypothetical protein BEWA_027520 [Babesia equi]
Length = 355
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 201/321 (62%), Gaps = 21/321 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A ++R + E C++CF + FE +++ I +L + G+++ IG SGGKDS+
Sbjct: 4 CSLCGSRPAVVRRSASGEPNCKDCFIDSFESDVYDYIRDKKLIEDGDKVCIGVSGGKDSS 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL VL L RR +L LL+IDEGI GYRD SL V + +YGL LKI+++ D +G
Sbjct: 64 VLLHVLWSLQRRFQCNWELCLLAIDEGIKGYRDHSLTVVDAIQARYGLELKILNFMDAFG 123
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++MD++V +IG KNNCT CG FRRQ L+ GA LL+ + + TGHNADD+AETVLLNI RGD
Sbjct: 124 YSMDKVVGLIGKKNNCTVCGTFRRQMLEVGARLLRANVLCTGHNADDMAETVLLNIFRGD 183
Query: 196 IARLSRCTLITTGEDGPIP--------------------RCKPFKYTYEKEIMFTYAYFK 235
+ +L++ + + G G P R KP Y++EKEI+ YA F+
Sbjct: 184 VYKLAKASQLKDGLPGEAPDGADTEHCSERSQKTGTPFRRIKPLLYSFEKEIVL-YARFQ 242
Query: 236 RLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCE 295
LDYFSTECIYSP AYRG+ R FIK+LE + PR IL+IIK+G + +G C
Sbjct: 243 SLDYFSTECIYSPEAYRGYMRTFIKNLELIEPRIILNIIKAGSMLYADYAPIDGSKGVCV 302
Query: 296 RCGYISSQKWCKACVLLEGLN 316
CG + + CKAC ++ L+
Sbjct: 303 DCGVVGVKDLCKACSIVRKLD 323
>gi|84994388|ref|XP_951916.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302077|emb|CAI74184.1| hypothetical protein, conserved [Theileria annulata]
Length = 391
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 201/346 (58%), Gaps = 58/346 (16%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A L+R + C+ CF E FE +I++ I+ +L G+ + IG SGGKDS+
Sbjct: 4 CEYCFEGSAVLRRSFSGLPSCKTCFIESFENDIYEYIMSEKLISDGDSVCIGVSGGKDSS 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VLS++ ++ +L+LL +DEGI GYRDDSL+ VK +KD +G
Sbjct: 64 VLAHVLSKIKEKYKMDWNLYLLGVDEGIKGYRDDSLKVVKS------------IFKDRFG 111
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++MD++VK+IG + NCT CG FRRQ L+ GA + + + TGHNADD+AETVLLN+ RGD
Sbjct: 112 FSMDQVVKLIGKRGNCTVCGSFRRQMLEIGARIFGANVLCTGHNADDMAETVLLNLFRGD 171
Query: 196 IARLSRCTLIT-----TGE------------DG--------------------PIPRCKP 218
+ +L+ + T GE DG I R KP
Sbjct: 172 LLKLTNSNITTYSINSVGELNGFKEDLDNQIDGKNVNLEIKSKLNQSTNNKLRKIKRVKP 231
Query: 219 FKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGE 278
KY++EKEI+ YA + LDYFSTECIYSP AYRG R FIK+LE + P+ IL+IIKSG+
Sbjct: 232 LKYSFEKEIVL-YARYLSLDYFSTECIYSPEAYRGHMRSFIKNLELINPKIILNIIKSGD 290
Query: 279 NFRI--STSTKMPEQGTCERCGYISSQKWCKACVL------LEGLN 316
NF +++ + PE+ C+ CG S CK C + LEGLN
Sbjct: 291 NFHSEHTSNGEAPERNFCQICGIDSINNICKPCKIVQQLHNLEGLN 336
>gi|440493579|gb|ELQ76034.1| PP-loop superfamily ATPase-like protein, partial
[Trachipleistophora hominis]
Length = 285
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/284 (48%), Positives = 184/284 (64%), Gaps = 35/284 (12%)
Query: 53 VGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQ 112
V N LF GE++ + SGGKDSTVLA ++ LN+RH+YG++L L+ +DEGI GYRD SL+
Sbjct: 1 VQNDLFSRGEKVLVAVSGGKDSTVLAHIMDLLNKRHDYGINLHLVCVDEGIKGYRDHSLE 60
Query: 113 TVKRNEIQYGLPLKIVSYKDLYGWTMDEIV--KVIGLKNNCTFCGVFRRQALDRGASLLK 170
VK+N+ +Y L L+IVS+K+++ TMDE++ K +G +CT+CGVFRRQAL+ GA +
Sbjct: 61 MVKQNKKEYNLELEIVSFKEMFELTMDEVMQKKRVG---SCTYCGVFRRQALEEGARRIG 117
Query: 171 VDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED-------------------- 210
KI TGHNADD+AETV+LN+LRGD RL RCT T ++
Sbjct: 118 ATKIITGHNADDMAETVVLNLLRGDFNRLKRCTAARTKKNLSDEPNIEDMKKGCGCDESV 177
Query: 211 --GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+ R KPFKY YEKEI+F YAY K L YFSTECIYSP A+R +AR F++ +E P
Sbjct: 178 YSASLVRVKPFKYIYEKEIVF-YAYLKNLKYFSTECIYSPGAHREYARMFLRSVE---PE 233
Query: 269 AILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ--KWCKACV 310
I+++IKSGE S + C CG ++S K CKACV
Sbjct: 234 LIMNVIKSGEFLERSDAG--ARVWRCVSCGKMTSSAAKRCKACV 275
>gi|399219054|emb|CCF75941.1| unnamed protein product [Babesia microti strain RI]
Length = 308
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 188/309 (60%), Gaps = 6/309 (1%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ CN R L R T C+ECF + F EIH+ IV + +R+ +G SGGKDS
Sbjct: 2 ICNYCNTRPPCLIRQFTGRHCCKECFLDNFVSEIHETIVQYDMINNNDRVCVGVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VL +L + + Y LFLL+IDEGI GYRDDSL V+ + +Y LPL+++S+K +
Sbjct: 62 SVLIDILYNIKVTYGYSWQLFLLAIDEGIKGYRDDSLAVVQHIKDKYNLPLEVLSFKHSF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G MDEIV G KNNCT CGV+RR L++G ++ +KI TGHNADD+AET+LLN+ RG
Sbjct: 122 GRDMDEIVIKTGSKNNCTVCGVYRRNLLNQGGKFIQANKICTGHNADDVAETLLLNLFRG 181
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D +L + + + DG I R KP +KEI+ YA + ++YFSTEC Y +AYRG
Sbjct: 182 DSLKLVQQSSLLNNVDG-ITRIKPLFKCAQKEIVL-YARYANIEYFSTECKYLKDAYRGK 239
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE----QGTCERCGYISSQKWCKACV 310
R+FI L+ PR +++++ S + S S + E + CE CG ++ + CK C
Sbjct: 240 MRDFINRLQITNPRLVINLVNSSLQYGSSKSIESVEIDANRSKCENCGSLADGRLCKMCQ 299
Query: 311 LLEGLNRGL 319
+ E LN L
Sbjct: 300 ITEKLNNTL 308
>gi|311258078|ref|XP_003127439.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Sus
scrofa]
Length = 304
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 183/269 (68%), Gaps = 9/269 (3%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL
Sbjct: 11 LGASGGKDSTVLAHVLRELAPR--LGISLRLVAVDEGIGGYRDAALAAVRRQAARWELPL 68
Query: 126 KIVSYKDLYG-WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNA 180
+V+Y DL+G WTMD + + CTFCGV RR+AL+ GA L+ + TGHNA
Sbjct: 69 TVVAYADLFGGWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNA 128
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
DD+AETVL+N LRGD RL+R + + +G +PRC+P + +KE++ YA+F+RLDY
Sbjct: 129 DDMAETVLMNFLRGDAGRLARGGGLGSPGEGGALPRCRPLQLASQKEVVL-YAHFRRLDY 187
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGY 299
FS EC+Y+P A+RG AR+ +K LE RP A+LD++ S E ++ + + P G C RCG
Sbjct: 188 FSEECVYAPEAFRGHARDLLKQLEAARPSAVLDLVHSAERLALAPAARPPPPGACSRCGA 247
Query: 300 ISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
++S+ C+AC LL+GLNRG P++ I + R
Sbjct: 248 LASRALCQACALLDGLNRGRPRLAIGKGR 276
>gi|221481085|gb|EEE19493.1| cancer-associated gene protein, putative [Toxoplasma gondii GT1]
Length = 575
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 172/275 (62%), Gaps = 7/275 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +L R + + CRECF FE+++ I LF+ G+++A+ SGGKDS
Sbjct: 68 CQFCGSPRVSLLRVASRLRSCRECFVRAFEDDVSAFIRRFSLFQRGQKVAVCVSGGKDSA 127
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VL VL LN R N GL L LL++DEGI GYRD +L V+RN Y LPL +VSY LY
Sbjct: 128 VLLHVLHTLNARENLGLSLHLLAVDEGIKGYRDHALAAVRRNSEVYNLPLHVVSYASLYH 187
Query: 135 GWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
GWTMD I + ++G +CTFCG+FRRQA +RGA + D + TGHNADD AET L+NIL
Sbjct: 188 GWTMDRIAQQALLGKDGDCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNIL 247
Query: 193 RGDIARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
RGD+ RL TG +GP + R KP +Y++E++ YA+F RLDYF+TEC YS A
Sbjct: 248 RGDMQRLPVSGAPLTGSREGPSVMRVKPLLASYQREVVL-YAHFNRLDYFATECTYSGAA 306
Query: 251 YRGFAREFIKDLE-RLRPRAILDIIKSGENFRIST 284
YRG R F+ L+ + +LD++ + + +
Sbjct: 307 YRGLVRNFLSSLQDNQHQQRVLDLLHAARKLWVPS 341
>gi|390479333|ref|XP_003735697.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Callithrix jacchus]
Length = 329
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 196/322 (60%), Gaps = 18/322 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ A +RP++ + +C C F+ E+ ++ L G +A+GASGGKDST
Sbjct: 6 CASCH--AAXRRRPRSGQALCGACVCAAFKTEVLHTVLAGCLLPPGAVVAVGASGGKDST 63
Query: 76 VLAFVLSELNRRHNY---GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
VLA VL L R G+ L L+++DEGI GY ++ LP I+ Y+D
Sbjct: 64 VLAHVLRALVLRALVLRLGVSLRLVAVDEGIGGY----------QAARWELPFTILVYED 113
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
L+ D +V+ TFCG RR+AL+ GA I TGHNADD+AETVL+N L
Sbjct: 114 LFRVLTDAMVRSTAGSGR-TFCGELRRRALEXGARRAGATNIETGHNADDMAETVLMNFL 172
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD RL+R + + +G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P A+
Sbjct: 173 RGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPEAF 231
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG AR+ +K LE RP A+LD++ S E ++ S + P G C RCG ++S+ C+AC L
Sbjct: 232 RGHARDLLKRLEAARPSAVLDLVHSAERLALAASARPPRPGACSRCGALASRALCQACAL 291
Query: 312 LEGLNRGLPKMGIVRSRGQNNE 333
L+GLNRG P++ I + R + +E
Sbjct: 292 LDGLNRGRPRLAIGKGRRRLDE 313
>gi|66357668|ref|XP_626012.1| MJ1157-like thiouridine synthase (Pploop atpase) plus Zn ribbon.
involved in RNA metabolism. [Cryptosporidium parvum Iowa
II]
gi|46227217|gb|EAK88167.1| MJ1157-like thiouridine synthase (Pploop atpase) plus Zn ribbon.
involved in RNA metabolism. [Cryptosporidium parvum Iowa
II]
Length = 306
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 172/293 (58%), Gaps = 22/293 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+FK G R+ + SGGKDS+VL VL ELN+R +YG++L L+++DEGI GYRDDSL+ VK
Sbjct: 5 MFKRGNRVGVCISGGKDSSVLLNVLYELNKRKDYGIELELIAVDEGIKGYRDDSLEVVKY 64
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ Y PL I+S+KD++ TMDEI N+CT+CGVFRR+ALD G+ + D I T
Sbjct: 65 QQEYYNCPLTILSFKDMFNTTMDEIQSKSSKSNSCTYCGVFRRKALDIGSYKVNADVICT 124
Query: 177 GHNADDIAETVLLNILRGDIARLSRC------TLITTGED-------------GPIPRCK 217
GH+ DD ET+LLNILRGD RL RC ITT +D PR K
Sbjct: 125 GHSCDDTCETLLLNILRGDFNRLRRCINPITNNEITTTKDQMQNHDSQNEAFLNIKPRVK 184
Query: 218 PFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSG 277
P Y YEKEI+ YA++ L YFSTEC YS +AYRG +REFI+ ++ + ++I +
Sbjct: 185 PLMYCYEKEIVL-YAHYLNLKYFSTECTYSVDAYRGVSREFIRKIQSFDYKYSFNMILAA 243
Query: 278 ENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
+ + S P C CGYISS C C L+ L P + + R
Sbjct: 244 QELNLEQSNSSPNYIARKCTICGYISSSTICNGCNLINALKHDNPNLILKNQR 296
>gi|443927060|gb|ELU45593.1| cytoplasmic tRNA 2-thiolation protein 1 [Rhizoctonia solani AG-1
IA]
Length = 488
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 146/208 (70%), Gaps = 22/208 (10%)
Query: 114 VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT------------------FCG 155
VKRN+ QY LPLKI+SY +LYGWTMD+IV+ +G KNNCT FCG
Sbjct: 266 VKRNQQQYDLPLKILSYDELYGWTMDKIVEQVGRKNNCTYLLPRFDESVLMSLDIGTFCG 325
Query: 156 VFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPR 215
VFRRQALDRGA+ L VD I TGHNADDIAET+ +++RGDIARL RCT ITT + I R
Sbjct: 326 VFRRQALDRGAAQLGVDHIVTGHNADDIAETIE-SVMRGDIARLGRCTQITTQSEDTIKR 384
Query: 216 CKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK 275
KPFKY YEKEI+ YA+FK+LDYFSTECIYSP+AYRG AR F+KDLE RP AI+DII
Sbjct: 385 SKPFKYAYEKEIVL-YAHFKKLDYFSTECIYSPDAYRGHARAFLKDLEAARPSAIVDIIH 443
Query: 276 SGENFRISTSTKMPEQGTCERCGYISSQ 303
SGE F + K +R Y+S +
Sbjct: 444 SGEAFELREEAKT--VAKAQRKHYVSHK 469
>gi|260942485|ref|XP_002615541.1| hypothetical protein CLUG_04423 [Clavispora lusitaniae ATCC 42720]
gi|238850831|gb|EEQ40295.1| hypothetical protein CLUG_04423 [Clavispora lusitaniae ATCC 42720]
Length = 268
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 156/256 (60%), Gaps = 50/256 (19%)
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+PL+IVSYK+LY W+MDEIV G++++CT+CGV RRQALDRGA+ L + + TGHNADD
Sbjct: 1 MPLEIVSYKELYDWSMDEIVACAGIRSSCTYCGVLRRQALDRGAAKLGIQHVVTGHNADD 60
Query: 183 IAETVLLNILRGDIARL-SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+AETVL+N+LRGD ARL S C L+T E P+ R KPFKY Y+KEI+ YA++KRLDYFS
Sbjct: 61 MAETVLMNLLRGDTARLESSCALLTHSEGSPVRRSKPFKYMYQKEIVL-YAHYKRLDYFS 119
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--------------------- 280
TEC Y+P A+RG ARE +K L +RP ++DII SGE F
Sbjct: 120 TECTYAPEAFRGTARELLKGLGAVRPSVVMDIIHSGEQFVLKKKEIRGNKKKGKKGKTEN 179
Query: 281 ---------------RISTSTKMPEQG------------TCERCGYISSQKWCKACVLLE 313
R +T E+G TCERCGYI+S + CKAC+LL
Sbjct: 180 TKDTAEAEKSEKTATRGNTVPPRKERGAVNSDGSVSLGNTCERCGYITSNRICKACLLLA 239
Query: 314 GLNRGLPKMGIVRSRG 329
GL PKM + G
Sbjct: 240 GLEASRPKMAVESEEG 255
>gi|67588028|ref|XP_665313.1| cancer-associated gene protein like (41.3 kD) (4A872)
[Cryptosporidium hominis TU502]
gi|54655939|gb|EAL35084.1| cancer-associated gene protein like (41.3 kD) (4A872)
[Cryptosporidium hominis]
Length = 306
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 171/294 (58%), Gaps = 22/294 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++FK G R+ + SGGKDS+VL VL ELN+R +YG++L L+++DEGI GYRDDSL+ VK
Sbjct: 4 RMFKRGNRVGVCISGGKDSSVLLNVLYELNKRKDYGIELELIAVDEGIKGYRDDSLEVVK 63
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+ Y PL I+S+KD++ TMDEI N+CT+CGVFRR+ALD G+ + D I
Sbjct: 64 YQQEYYNCPLTILSFKDMFNTTMDEIQSKSSKSNSCTYCGVFRRKALDIGSYKVNADVIC 123
Query: 176 TGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDGPI------------------PRC 216
TGH+ DD ET+LLNILRGD RL RC IT E PR
Sbjct: 124 TGHSCDDTCETLLLNILRGDFNRLRRCINPITNNEITKTKDQMQNHDSQNEAFLNIKPRV 183
Query: 217 KPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKS 276
KP Y YEKEI+ YA++ L YFSTEC YS +AYRG +REFI+ ++ + ++I +
Sbjct: 184 KPLMYCYEKEIVL-YAHYLNLKYFSTECTYSVDAYRGVSREFIRKIQSFDYKYSFNMILA 242
Query: 277 GENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
+ + S P C CGYISS C C L+ L P + + R
Sbjct: 243 AQELNLEQSNSSPNYIARKCTICGYISSSTICNGCNLVNALKHDNPNLILKNQR 296
>gi|345492462|ref|XP_001600006.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
gi|345495979|ref|XP_001605189.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
gi|345495995|ref|XP_001600789.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
Length = 186
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 149/212 (70%), Gaps = 37/212 (17%)
Query: 22 RKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL 81
+ A LKRPKT + +C+ECFY+ FE EIH IV +LFK G+++AIGASGGKDSTVLA++L
Sbjct: 12 KNAVLKRPKTNDPMCKECFYDCFETEIHVTIVKGELFKRGDKVAIGASGGKDSTVLAYIL 71
Query: 82 SELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEI 141
LN R++YGL+LFLLSI+EGISGYRDDSL+TVK+N Y LPLKI+ YKDLYGWTMDEI
Sbjct: 72 KLLNERYDYGLELFLLSIEEGISGYRDDSLETVKQNRDDYQLPLKILFYKDLYGWTMDEI 131
Query: 142 VKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR 201
VK IG KNNCTFCG+FRRQALDRGA+LL +L G
Sbjct: 132 VKQIGKKNNCTFCGIFRRQALDRGAALL---------------------LLEG------- 163
Query: 202 CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
+G IPRCKP KY YEKEI+ YA+
Sbjct: 164 --------EGTIPRCKPLKYAYEKEIVM-YAH 186
>gi|440300973|gb|ELP93420.1| ATP-binding domain containing protein, putative [Entamoeba invadens
IP1]
Length = 312
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 181/312 (58%), Gaps = 4/312 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C K P+ E +C+ CF E E ++ I L + + I IG SGGKDST
Sbjct: 4 CSKCQVNPVCTKTPEG-ELVCKTCFIERVETIVYDCIKSFNLIRPTDHITIGVSGGKDST 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA +L+ + ++H G L+++DEGI GYRD SL+ V E LPLKI+SYK YG
Sbjct: 63 ALATMLTRIEKQHPTGAKYTLVAVDEGIVGYRDRSLECVHWLEEYLQLPLKIISYKTEYG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
TMDEIV G +N C++CGV RRQ L++ S + + IATGHN DD+AETVL+N LRGD
Sbjct: 123 MTMDEIVSK-GGRNACSYCGVLRRQCLEKATSEVGGNVIATGHNGDDVAETVLMNFLRGD 181
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
RL RC + E G I R KPF +KE++ YA++ +L YFS EC Y+ A+RG A
Sbjct: 182 AVRLERCKSLLREEVGDIVRIKPFSLLTQKEVVL-YAHYMKLKYFSVECSYAGTAFRGNA 240
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACVLLEG 314
R F+++ + P + + S E + K + C+ CG +S C+AC +L
Sbjct: 241 RTFLQETQIKFPWIVRSCVISNEQASVKIKDKQQVKLKVCKLCGMKTSSDVCQACKMLAE 300
Query: 315 LNRGLPKMGIVR 326
L +G PK+ + +
Sbjct: 301 LRKGAPKIELTK 312
>gi|67470756|ref|XP_651341.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468066|gb|EAL45955.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449705659|gb|EMD45664.1| ATPbinding domain containing protein [Entamoeba histolytica KU27]
Length = 313
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 180/292 (61%), Gaps = 7/292 (2%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
IC++CF + E+ +HQ I QL + I IG SGGKDST LA +L+ + +R G
Sbjct: 22 ICKQCFIDRVEKLVHQCIDEFQLIYPTDHIVIGVSGGKDSTALATMLARIEKRWPSGAKY 81
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L+++DEGI GYRD SL+ V+ + LPL+I+SY + YG TMDEIV G KN C++C
Sbjct: 82 TLVAVDEGIVGYRDKSLECVRWLQNYLQLPLEIISYIETYGMTMDEIV-TRGGKNACSYC 140
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI---TTGEDG 211
GV RRQ L++ A + + IATGHN DD+AETVL+N LRGD+ARL RC + EDG
Sbjct: 141 GVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLERCKSLKRELEREDG 200
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAIL 271
I R KPF +KE++ YA++ +L YFS EC Y+ A+RG AR F++ + L P I
Sbjct: 201 -IIRIKPFSLLTQKEVVL-YAHYMKLQYFSVECTYAGTAFRGNARTFLQKTQILHPTIIH 258
Query: 272 DIIKSGENFRISTST-KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
+ + S E + ++ + C CG SS C+AC +++ L G+PK+
Sbjct: 259 NCVISNEQAKAELKKEQLKKSQRCTVCGMQSSSSLCQACKMMKELRNGMPKI 310
>gi|407036227|gb|EKE38069.1| PP-loop family protein [Entamoeba nuttalli P19]
Length = 313
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 179/292 (61%), Gaps = 7/292 (2%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
IC++CF + E+ +HQ I QL + I IG SGGKDST LA +L+ + +R G
Sbjct: 22 ICKQCFIDRVEKLVHQCIDEFQLIYPTDHIVIGVSGGKDSTALATMLTRIEKRWPSGAKY 81
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L+++DEGI GYRD SL+ V+ + LPL+I+SY + YG TMDEIV G KN C++C
Sbjct: 82 TLVAVDEGIVGYRDKSLECVRWLQNYLQLPLEIISYIETYGMTMDEIV-TRGGKNACSYC 140
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI---TTGEDG 211
GV RRQ L++ A + + IATGHN DD+AETVL+N LRGD+ARL RC + EDG
Sbjct: 141 GVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLERCKSLKRELEREDG 200
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAIL 271
I R KPF +KE++ YA++ +L YFS EC Y+ A+RG AR F++ + L P I
Sbjct: 201 -IIRIKPFSLLTQKEVVL-YAHYMKLQYFSVECTYAGTAFRGNARTFLQKTQILHPTIIH 258
Query: 272 DIIKSGENFRISTST-KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
+ + S E + ++ + C CG SS C+AC ++ L G+PK+
Sbjct: 259 NCVISNEQAKAELKKEQLKKSQRCTVCGMQSSSSLCQACKMMNELRNGMPKI 310
>gi|167385245|ref|XP_001737264.1| ATP-binding domain-containing protein [Entamoeba dispar SAW760]
gi|165899992|gb|EDR26462.1| ATP-binding domain-containing protein, putative [Entamoeba dispar
SAW760]
Length = 313
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 179/292 (61%), Gaps = 7/292 (2%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
IC++CF + E+ +HQ I QL + I IG SGGKDST LA +L+ + +R G
Sbjct: 22 ICKQCFIDRVEKLVHQCIDEFQLIYPTDHIVIGVSGGKDSTALATMLTRIEKRWPSGAKY 81
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L+++DEGI GYRD SL+ V+ + LPL+I+SY + YG TMDEIV G KN C++C
Sbjct: 82 TLVAVDEGIVGYRDKSLECVRWLQEYLQLPLEIISYIETYGMTMDEIV-TRGGKNACSYC 140
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI---TTGEDG 211
GV RRQ L++ A + + IATGHN DD+AETVL+N LRGD+ARL RC + EDG
Sbjct: 141 GVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLERCKSLKRELEREDG 200
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAIL 271
I R KPF +KE++ YA++ +L YFS EC Y+ A+RG AR F++ + L P I
Sbjct: 201 -IIRIKPFSLLTQKEVVL-YAHYMKLRYFSVECTYAGTAFRGNARTFLQKTQILHPSIIR 258
Query: 272 DIIKSGENFRISTST-KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
+ + S E + ++ + C CG SS C+AC ++ L G+PK+
Sbjct: 259 NCVISNEQAKAELKKEQLKKSQRCTVCGMQSSSSLCQACKMMNELRNGMPKI 310
>gi|225715026|gb|ACO13359.1| ATP-binding domain-containing protein 3 [Esox lucius]
Length = 202
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 137/184 (74%), Gaps = 7/184 (3%)
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAY 233
+GHNADD+AETVL+N+LRGDIARL RCT I+T +G +PRCKP KY YEKEI+ YAY
Sbjct: 24 SGHNADDVAETVLMNVLRGDIARLRRCTAISTASEGEGVVPRCKPLKYAYEKEIVL-YAY 82
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
FK+LDYFSTECIYSPNAYRG AR F+KDLE +RP AI+D+I SGEN + KMP QGT
Sbjct: 83 FKKLDYFSTECIYSPNAYRGHARTFLKDLEAVRPSAIMDVIHSGENPSVREGVKMPVQGT 142
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESKQCG 353
C RCGYISSQ CK+CVLLEGLNRGLP++GI G+++ + + E ++
Sbjct: 143 CGRCGYISSQTLCKSCVLLEGLNRGLPRLGI----GKHHRLHGKILSQQPLTQAEERKLK 198
Query: 354 TLDF 357
TL+
Sbjct: 199 TLEL 202
>gi|323309206|gb|EGA62431.1| Ncs6p [Saccharomyces cerevisiae FostersO]
Length = 216
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 142/196 (72%), Gaps = 10/196 (5%)
Query: 138 MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIA 197
MDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILRGD+A
Sbjct: 1 MDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVA 60
Query: 198 RLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAR 256
RL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+RG AR
Sbjct: 61 RLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFRGTAR 119
Query: 257 EFIKDLERLRPRAILDIIKSGENFRISTS--------TKMPEQGTCERCGYISSQKWCKA 308
E++K+LE +RP I+DII+SGEN + K + C RCGY+SS CKA
Sbjct: 120 EYMKNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNNICKA 179
Query: 309 CVLLEGLNRGLPKMGI 324
C+LLEGL + ++ I
Sbjct: 180 CMLLEGLEKSRAQVAI 195
>gi|348559286|ref|XP_003465447.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Cavia porcellus]
Length = 423
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 192/312 (61%), Gaps = 20/312 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVF---EEEIHQVIVGNQLFKAGERIAIGASGGK 72
C++C+ +AAL+RP++ + +C F F E+ ++V L +G +A+ ASGGK
Sbjct: 6 CASCHAARAALRRPRSGQALCGPRFCAAFMCSTTEVLHMVVAGHLLPSGAVVAVSASGGK 65
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DST LA VL EL R GL L LL++D+GI GYRD +L TV+R ++GL L +V+Y+D
Sbjct: 66 DSTELAHVLRELAPR--LGLTLRLLAVDQGIGGYRDAALATVRRQAARWGLRLTVVAYED 123
Query: 133 LYG-WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI----ATGHNADDIAETV 187
L+G WTMD + + + + + RR AL GA L+ TGHN D +AE V
Sbjct: 124 LFGDWTMDTVARALPHRVQ-----MLRRGALGEGARLVGATSSHPVSPTGHN-DVVAEMV 177
Query: 188 LLNILRGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
L+N LRG+ ARL+R + + +G +PRC+P ++ +KE++ YA+ +RLDYFS C+Y
Sbjct: 178 LMNFLRGEAARLARGGGLGSAGEGGALPRCRPLQFASQKEVVL-YAHSRRLDYFSEGCVY 236
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
+P A+RG AR ++ LE RP A LD++ S E ++ + + P C RCG ++S+ C
Sbjct: 237 APRAFRGHARXLLQRLEAARPTAALDLVHSAERLALAPAVRPPR--XCSRCGVLASRALC 294
Query: 307 KACVLLEGLNRG 318
+ C LL+GL RG
Sbjct: 295 QGCALLDGLARG 306
>gi|344280724|ref|XP_003412132.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Loxodonta
africana]
Length = 314
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 169/251 (67%), Gaps = 9/251 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPRSGQALCGTCFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL IV+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGVSLRLVAVDEGIGGYRDAALAAVQRQAARWELPLTIVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + + CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGDI-ARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD L + GE G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDTGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIK 260
A+RG+AR+ +K
Sbjct: 243 AFRGYARDLLK 253
>gi|403299532|ref|XP_003940537.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Saimiri
boliviensis boliviensis]
Length = 286
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 169/254 (66%), Gaps = 9/254 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CTSCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+
Sbjct: 66 VLAHVLRELAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 135 GWTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
GWTMD + + ++ CTFCGV RR+AL+ GA + I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGD-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD L + GE +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P
Sbjct: 184 FLRGDAGRLARGGGLGSPGEGSALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPE 242
Query: 250 AYRGFAREFIKDLE 263
A+RG AR+ +K LE
Sbjct: 243 AFRGHARDLLKRLE 256
>gi|86170928|ref|XP_966113.1| PP-loop family protein, putative [Plasmodium falciparum 3D7]
gi|46361078|emb|CAG25365.1| PP-loop family protein, putative [Plasmodium falciparum 3D7]
Length = 482
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 140/187 (74%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC CN++ + RP E++C+ECF E FEE++H I+ ++F+ ++I I SGGKDS
Sbjct: 2 LCEKCNEKNVCMMRPSNKEKLCKECFIESFEEDVHDTILKKRMFEDNDKICIAVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VLA VL L +++NY +LFLL+IDEGI GYRDDSL+ V + E Y LPLKI+ +++L+
Sbjct: 62 SVLAHVLVNLKKKYNYNWELFLLAIDEGIKGYRDDSLKVVYKLEKLYNLPLKILKFENLF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+TMD++VK IG KNNCT CGVFRRQ+ ++GA L K+ TGHNADD+AET+L+N+ RG
Sbjct: 122 SYTMDDVVKFIGKKNNCTVCGVFRRQSFEKGALLFNATKLVTGHNADDLAETILMNMCRG 181
Query: 195 DIARLSR 201
DI +L++
Sbjct: 182 DIDKLAK 188
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 213 IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILD 272
+PR KP + YEKEI+ YA+ +LDYFSTEC YSPN++RG R FIKD+E + + IL+
Sbjct: 351 LPRLKPLMWCYEKEIVL-YAFHLKLDYFSTECTYSPNSFRGNLRCFIKDIELINAQFILN 409
Query: 273 IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNR 317
II S E F + S C +CG +S K CKAC++++GLN
Sbjct: 410 IIHSAEFFYFN-SINQKTLNVCIKCGAYTSNKICKACLIIDGLNN 453
>gi|1322852|emb|CAA96927.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 193
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/160 (63%), Positives = 130/160 (81%)
Query: 8 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIG 67
+K +LC C+ RKA ++RPK L ++C++CF VFE EIH IV N LF+ GE++A+G
Sbjct: 14 TKVKVSQLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVG 73
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
ASGGKDSTVLA +L LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I
Sbjct: 74 ASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEI 133
Query: 128 VSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
S+KDLY WTMDEIV V G++N+CT+CGVFRRQ+LDRGA+
Sbjct: 134 FSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAA 173
>gi|83316075|ref|XP_731068.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490990|gb|EAA22633.1| Uncharacterized protein family UPF0021 [Plasmodium yoelii yoelii]
Length = 418
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 136/187 (72%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC CN+ + +P E++C+ CF E FE+E+H I+ ++F+ ++I I SGGKDS
Sbjct: 2 LCEQCNKNNVCMLKPSNKEKLCKHCFLESFEDEVHTTILKKKMFEDNDKICIAVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VL VL + +++NY +LFLL+IDEGI GYRDDSL+ V + E Y LPL ++ ++D++
Sbjct: 62 SVLTHVLVNIKKKYNYNWNLFLLAIDEGIKGYRDDSLKVVYKLEKLYNLPLSVLKFQDIF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+TMD++V IG KNNCT CGVFRRQA+++GA L K+ TGHNADD+AET+L+N+ RG
Sbjct: 122 SYTMDDVVSYIGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADDLAETILMNMCRG 181
Query: 195 DIARLSR 201
DI +L++
Sbjct: 182 DIDKLAK 188
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 84/126 (66%), Gaps = 3/126 (2%)
Query: 193 RGDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
D+A++S + + DG IPR KP ++YEKEI+ YAY +LD+FSTEC YSPN++
Sbjct: 262 NNDVAKISNDNIKYENKGDGFIPRLKPLMWSYEKEIVL-YAYHLKLDFFSTECTYSPNSF 320
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RG R FIKDLE + P+ IL+II S E F +T+ K + TC +CG +S CKAC++
Sbjct: 321 RGNLRSFIKDLEIINPQIILNIIHSSEFFYFNTNIK-KKLNTCIKCGAYTSNVVCKACLI 379
Query: 312 LEGLNR 317
++GLN
Sbjct: 380 VDGLNN 385
>gi|327280520|ref|XP_003225000.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Anolis
carolinensis]
Length = 207
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 178 HNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
HNADD+AETVL+N LRGD+ RL RCT I TG +G +PRCKP K+ YEKEI+ YAYF+ L
Sbjct: 21 HNADDVAETVLMNFLRGDVGRLRRCTEIMTGSEGALPRCKPLKHAYEKEIVL-YAYFQGL 79
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERC 297
DYFSTEC+YSPNAYRG AR +KDLE RP + D++ SGE + +MP QGTC+RC
Sbjct: 80 DYFSTECVYSPNAYRGHARTLLKDLEATRPSTVADLVHSGERLALREDVRMPTQGTCQRC 139
Query: 298 GYISSQKWCKACVLLEGLNRGLPKMGI 324
GY+SSQ CKACVLLEGLNRGLP++ I
Sbjct: 140 GYLSSQALCKACVLLEGLNRGLPRLAI 166
>gi|156100899|ref|XP_001616143.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805017|gb|EDL46416.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 443
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 143/195 (73%), Gaps = 3/195 (1%)
Query: 10 KAGGRL---CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAI 66
+ GGR C C ++ + +P +++CR+CF E FEE +H+ I+ ++F+ ++I I
Sbjct: 2 EGGGRPRAPCEECGEKNIRMVKPSDRKKLCRDCFTEGFEEHVHETILKKRMFEEKDKICI 61
Query: 67 GASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLK 126
SGGKDS+VLA VL ++ R+HNY DLFLL+IDEGI GYRDDSL+ V + + +Y LPLK
Sbjct: 62 AVSGGKDSSVLAHVLVQIRRKHNYKWDLFLLAIDEGIKGYRDDSLKIVFKLQEKYHLPLK 121
Query: 127 IVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
++ ++D++ +TMD +V IG KNNCT CGVFRRQA++RGA L K+ TGHNADD+AET
Sbjct: 122 VLKFEDIFTYTMDAVVSFIGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNADDLAET 181
Query: 187 VLLNILRGDIARLSR 201
+L+N+ RGD+ +L++
Sbjct: 182 ILMNMCRGDLEKLAK 196
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 213 IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILD 272
+PR KP + YEKEI+ YA++K+LDYFSTEC YSPN++RG R FIKDLE + P+ IL+
Sbjct: 285 LPRLKPLMWCYEKEIVL-YAFYKQLDYFSTECTYSPNSFRGNLRSFIKDLEMINPQFILN 343
Query: 273 IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
II S E F ++S + Q C CG +S CKAC+++EGL
Sbjct: 344 IIHSSEFFYHNSSRRKVLQ-VCASCGAYTSNPVCKACLIVEGL 385
>gi|68063159|ref|XP_673589.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491549|emb|CAI00377.1| conserved hypothetical protein [Plasmodium berghei]
Length = 405
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 136/187 (72%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC CN+ + +P E++C+ CF E FE+E+H I+ ++F+ ++I I SGGKDS
Sbjct: 2 LCEQCNKNNVCILKPSNKEKLCKYCFLESFEDEVHTTILKKKMFEDNDKICIAVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VL VL + +++NY +LFLL+IDEGI GYRDDSL+ V + E Y LPL ++ ++D++
Sbjct: 62 SVLTHVLVNIKKKYNYNWNLFLLAIDEGIKGYRDDSLKVVYKLEKLYNLPLSVLKFQDIF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+TMD++V IG KNNCT CGVFRRQA+++GA L K+ TGHNADD+AET+L+N+ RG
Sbjct: 122 SYTMDDVVSYIGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADDLAETILMNMCRG 181
Query: 195 DIARLSR 201
DI +L++
Sbjct: 182 DIDKLAK 188
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
DIA++S T DG IPR KP ++YEKEI+ YAY +LD+FSTEC YSPN++RG
Sbjct: 256 DIAKISNDNTKYENKGDGFIPRLKPLMWSYEKEIVL-YAYHLKLDFFSTECTYSPNSFRG 314
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
R FIKDLE + P+ IL+II S E F +T+ K + TC +CG +S CKAC++++
Sbjct: 315 NLRSFIKDLEIINPQIILNIIHSSEFFYFNTNIK-KKLNTCIKCGAYTSNVVCKACLIVD 373
Query: 314 GLNR 317
GLN
Sbjct: 374 GLNN 377
>gi|240272838|gb|EER36367.1| VEG136 protein [Ajellomyces capsulatus H143]
Length = 308
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 126/159 (79%), Gaps = 2/159 (1%)
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+PL+IV Y +LYGWTMD++V IG K NCT+CGVFRRQALDRGA+ L + + TGHNADD
Sbjct: 1 MPLEIVGYGELYGWTMDQVVAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADD 60
Query: 183 IAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+AET+++N+LRGD+ RL+R T ++T I R KP KY YEKEI+ YA++K+L YFS
Sbjct: 61 VAETIVMNLLRGDLPRLARSTNIVTESSASDIKRSKPLKYAYEKEIVL-YAHYKKLCYFS 119
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
TECIYSP A+RG AR IKDLE++RP +ILDI++SGE+
Sbjct: 120 TECIYSPEAFRGSARTLIKDLEKVRPSSILDIVRSGEDM 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
K+ G CERCGY++SQ+ CKAC+LLEGLN+ P+ I
Sbjct: 243 KLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTI 280
>gi|345785525|ref|XP_854565.2| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1 [Canis lupus familiaris]
Length = 256
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/251 (47%), Positives = 163/251 (64%), Gaps = 11/251 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C+ +AAL+RP++ + +C CF FE E+ + +L G +A+GASGGKDST
Sbjct: 6 CSSCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVQAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L V+R + LPL +V+Y DL+G
Sbjct: 66 VLAHVLRELAPR--LGVSLRLVAVDEGIGGYRDAALAAVRRQAALWDLPLTVVAYADLFG 123
Query: 136 -WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
WTMD + + + CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMN 183
Query: 191 ILRGD-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
LRGD L + GE G +PRC+P + +KE++ YA+F+RLDYFS EC+ +P
Sbjct: 184 FLRGDAGRLARGGGLGSRGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVXAPE 242
Query: 250 AYRGFAREFIK 260
A+RG E++K
Sbjct: 243 AFRG--HEWVK 251
>gi|171681948|ref|XP_001905917.1| hypothetical protein [Podospora anserina S mat+]
gi|170940933|emb|CAP66583.1| unnamed protein product [Podospora anserina S mat+]
Length = 380
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
Query: 120 QYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
+ LP ++ K LY WTMDE+V+ IG K NCT+CGVFRRQALDRGA +L + + TGHN
Sbjct: 88 HHRLPRRLPPNK-LYDWTMDEVVQTIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHN 146
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLD 238
ADD+AETV++N+LR D++RLSR T I TG++ + R KP KY YEKEI+ YA+ K+L+
Sbjct: 147 ADDVAETVMMNLLRADLSRLSRSTSIVTGDNRSEVKRSKPLKYAYEKEIVL-YAFHKKLE 205
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
YFSTECIYSP A+RG AR IK LE++RP AILDI++SGE+
Sbjct: 206 YFSTECIYSPEAFRGSARGLIKQLEKVRPSAILDIVRSGEDM 247
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
G C+RCGY+SSQ+ C+AC LLEGLN+ P++ I
Sbjct: 348 GQCKRCGYMSSQEICQACTLLEGLNKNRPQIQI 380
>gi|253744294|gb|EET00518.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia intestinalis ATCC 50581]
Length = 349
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 180/330 (54%), Gaps = 38/330 (11%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +K TL+++C+ECF+ EEE+ + + + L + GE IA+G SGGKDS+
Sbjct: 3 CEGCGNKTPMIKHAMTLKRLCKECFFREVEEEVQRTVEKHSLVRPGESIALGVSGGKDSS 62
Query: 76 VLAFVLSELNRRHNY---GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
V+ ++ L R+ G+ +++++EGI GYRD+SL ++R +Y LKIV +++
Sbjct: 63 VMLHIMHNLRLRYRAFYDGVRFAMVAVNEGIQGYRDESLACLQRLHKKYPYELKIVDFEE 122
Query: 133 LYGWTMDEIVKV--------------IGLKNN-------------CTFCGVFRRQALDRG 165
YG T+D+IV + L+++ C+FCG+ RR +L G
Sbjct: 123 RYGRTLDQIVNTANGDSSIHESVPLKVDLEDDTGRPQPTAKTTTACSFCGILRRNSLSHG 182
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
+ K+ATGHNADD AETVLLN++RGD A+L RC+ + D + R KP + ++
Sbjct: 183 SLQTHCTKVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLDQGVARIKPLCHISQR 242
Query: 226 EIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP---RAILDIIKSGENFRI 282
+I+ YAY +RLD+FS EC Y+ A RG R F+ L +P L I++S R+
Sbjct: 243 DIVM-YAYLQRLDFFSVECPYATTALRGKPRSFLTSLC-TKPGYSDVTLRIMRSTRKLRL 300
Query: 283 STST---KMPEQGTCERCGYISSQKWCKAC 309
T+ ++ + C C S C+ C
Sbjct: 301 KTTCDTRRLTDLHLCPSCQSPVSTTRCQCC 330
>gi|300122192|emb|CBK22766.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 141/210 (67%), Gaps = 16/210 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+FK G+R+AIGASGGKDSTVLA+VLS LN+R++YGLDL+LLSIDEGI GYRD SL+TVK+
Sbjct: 1 MFKRGQRVAIGASGGKDSTVLAYVLSTLNKRYDYGLDLYLLSIDEGIVGYRDGSLETVKQ 60
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVI----GLKNNCTFCGVFRRQALDRGASLLKVD 172
N I Y LPL I SYK+L+G+TMDEIV G C++CGVFRRQAL+ GA D
Sbjct: 61 NSIDYQLPLVIYSYKELFGYTMDEIVTQTLDESGYTKACSYCGVFRRQALNIGAERSHAD 120
Query: 173 KIATGHNADDIAETVLLNIL----RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM 228
IATGHNADD AET + L + D A L ++ + C Y+KEI+
Sbjct: 121 LIATGHNADDNAETGFFSCLFCNEKSD-ASLQTASVNDKNREMNQSLC------YQKEIV 173
Query: 229 FTYAYFKRLDYFSTECIYSPNAYRGFAREF 258
YA+FK+L YFS EC Y+ YRG + F
Sbjct: 174 L-YAHFKKLLYFSIECSYAKFGYRGNSSFF 202
>gi|323333610|gb|EGA75003.1| Ncs6p [Saccharomyces cerevisiae AWRI796]
Length = 150
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 118/146 (80%), Gaps = 2/146 (1%)
Query: 138 MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIA 197
MDEIV V G++N+CT+CGVFRRQ+LDRGA+ L + + TGHNADD+AETVL+NILRGD+A
Sbjct: 1 MDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVA 60
Query: 198 RLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAR 256
RL + T I T G PI R KPFKY+Y+KEI+ YA++ +LDYFSTEC Y+P A+RG AR
Sbjct: 61 RLEKSTAIITQSSGSPIKRSKPFKYSYQKEIVL-YAHYMKLDYFSTECTYAPEAFRGTAR 119
Query: 257 EFIKDLERLRPRAILDIIKSGENFRI 282
E++K+LE +RP I+DII+SGEN +
Sbjct: 120 EYMKNLEAVRPSCIIDIIQSGENLAL 145
>gi|11499188|ref|NP_070424.1| hypothetical protein AF1595 [Archaeoglobus fulgidus DSM 4304]
gi|2648962|gb|AAB89651.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 304
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 16/310 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C++R +R +C+ F E FE + + + + G+RIAI SGGKDS
Sbjct: 4 CSKCSRRAVIFQRHAN-RHLCKRHFIEDFERRVKLAVKKYDMIQKGDRIAIALSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYG----LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
LAFVL++L YG L+ F ++IDEGI+GYR +++ ++ Q G+ +VS++
Sbjct: 63 TLAFVLNKL-----YGFRSDLEFFAITIDEGIAGYRPPTVEIARKVTEQLGMEHLVVSFE 117
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+ +G T+DE+VK G K CT+CGVFR+ L+R A + K+ATGHN DD +T+LLN
Sbjct: 118 ENFGMTLDEMVKR-GDKKPCTYCGVFRKYLLNRTAREMGATKLATGHNLDDETQTILLNF 176
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
L D+ R++R + ++G + R KPF+Y YEKE++ Y + L EC YS
Sbjct: 177 LNADMERMAR-LVPQRVQEGLVVRIKPFRYVYEKEVV-VYGFLHELPMDFDECPYSHFPV 234
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKAC 309
R R+F+ D E P ++ S E P+ CERCG + ++ C+AC
Sbjct: 235 RAAVRDFLYDFENKYPGRKFSVMSSFEKLIPCLKEIYPQIDLNRCERCGEPTPRRICQAC 294
Query: 310 VLLEGLNRGL 319
LLE L RG+
Sbjct: 295 KLLEEL-RGV 303
>gi|76156692|gb|AAX27848.2| SJCHGC06955 protein [Schistosoma japonicum]
Length = 148
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 109/121 (90%)
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDSTVLA++L+ LN+R++YG +L LLSIDEGISGYRDDSL TVKRN+IQY LPLKI+S
Sbjct: 1 GGKDSTVLAYILNLLNKRYDYGAELLLLSIDEGISGYRDDSLMTVKRNQIQYALPLKILS 60
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
Y++LYGW+MD+IVK IG K NCT+CG+FRRQALD+GA LL +KI TGHNADDIAETVL+
Sbjct: 61 YQELYGWSMDDIVKRIGNKRNCTYCGIFRRQALDKGALLLGANKICTGHNADDIAETVLM 120
Query: 190 N 190
N
Sbjct: 121 N 121
>gi|284162492|ref|YP_003401115.1| PP-loop domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284012489|gb|ADB58442.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 308
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 172/303 (56%), Gaps = 9/303 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + R L +C + F E FE ++ I + ++G+RIAI SGGKDS
Sbjct: 4 CDKCKRPAVTYIRHANL-HLCAKHFIEYFERKVKYAIKKFNMIESGDRIAIALSGGKDSV 62
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +VL + L++R + ++LF +++DEGI GYR +++ ++ + G+ IVS+KD +
Sbjct: 63 TLTYVLHKFLSKRRD--VELFAITVDEGIEGYRPPTVKIARKITSELGIEHIIVSFKDYF 120
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DE+VK +G K CT+CGVFR+ L++ A + K+ATGHN DD +T+LLN L+
Sbjct: 121 GMTLDEMVK-LGDKKPCTYCGVFRKYLLNKTAREMGATKLATGHNLDDEVQTILLNFLQA 179
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
DI RL+R + ++G I R KPF+ YE++++ Y L EC YS R
Sbjct: 180 DIERLAR-LIPQRVQEGLIMRIKPFREVYERDVV-VYGLLHNLPMDMNECPYSYFPVRAM 237
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKACVLL 312
R+FI + E P I++S E P+ CERCG +S++ C+ACVLL
Sbjct: 238 VRDFIYNFEEKYPGRKYSIMRSFETLIPCLKQMFPQIKLNRCERCGEPTSKRICQACVLL 297
Query: 313 EGL 315
E L
Sbjct: 298 EEL 300
>gi|159115787|ref|XP_001708116.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
gi|157436225|gb|EDO80442.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
Length = 351
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 176/332 (53%), Gaps = 40/332 (12%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ TL+++CR+CF E+E+ + + + L + GE IA+G SGGKDS+
Sbjct: 3 CEGCGTGTPMIRHSMTLKRLCRKCFLRAIEDEVQRTVEMHSLVRPGESIALGVSGGKDSS 62
Query: 76 VLAFVLSELNRRHNY---GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
V+ +L L R G+ +++++EGI GYR +SL ++R +Y L+IV +++
Sbjct: 63 VMLHILHTLRLRCQDVYDGVRFVMVAVNEGIQGYRGESLACLQRLHKKYPYELEIVGFEE 122
Query: 133 LYGWTMDEIVKVIG----------LKNN-------------------CTFCGVFRRQALD 163
YG T+D++V + LK + C+FCG+ RR +L
Sbjct: 123 RYGRTLDQLVNTVNGNSCTDTFAPLKADLEDVNDTGRPQPTAKTATACSFCGILRRNSLS 182
Query: 164 RGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTY 223
G+ + K+ATGHNADD AETVLLN++RGD A+L RC+ + + + R KP
Sbjct: 183 YGSLQTQCTKVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLNQGVARIKPLCNIA 242
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR---AILDIIKSGENF 280
+++I+ YA+ +RLDYFS EC Y+ A RG R F+ +L RP A L II+S
Sbjct: 243 QRDIVI-YAHLQRLDYFSVECPYATTALRGKPRSFLTNLC-TRPAYSDAALRIIRSTRKL 300
Query: 281 RIST---STKMPEQGTCERCGYISSQKWCKAC 309
R+ T + K+ C C S C+ C
Sbjct: 301 RLKTTHETQKLTSLHLCPSCQSPVSTTRCQCC 332
>gi|308158669|gb|EFO61238.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia P15]
Length = 360
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 169/331 (51%), Gaps = 38/331 (11%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ TL+++CRECF E E+ + I + L + GE IA+G SGGKDS+
Sbjct: 12 CENCGTGTPMIRHSMTLKRLCRECFLCAIETEVQRTIEIHNLIRPGESIALGVSGGKDSS 71
Query: 76 VLAFVLSELNRRHNY---GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
V+ +L L R+ G+ +++++EGI GYR +SL ++R +Y L+IV +K+
Sbjct: 72 VMLHILHTLRLRYQDVYDGVRFVMVAVNEGIQGYRGESLACLQRLRKKYPYELEIVGFKE 131
Query: 133 LYGWTMDEIVKVIG-----------------------------LKNNCTFCGVFRRQALD 163
YG T+D+IV + C+FCG+ RR +L
Sbjct: 132 RYGRTLDQIVNTVNGDSCNDTFAPIKADLEDANDTGRPQPTAKTTTACSFCGILRRNSLS 191
Query: 164 RGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTY 223
G+ K+ATGHNADD AET+LLN++RGD A+L RC+ + + + R KP
Sbjct: 192 YGSLQTHCTKVATGHNADDNAETILLNLIRGDAAKLVRCSEPLSDLNQGVARIKPLCNIA 251
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDL--ERLRPRAILDIIKSGENFR 281
+++I+ YA+ KRLDYFS EC Y+ A RG R F+ +L + L I+ S R
Sbjct: 252 QRDIVI-YAHLKRLDYFSVECPYATTALRGKPRSFLTNLCTKPAYSDVALRIMGSTRKLR 310
Query: 282 ISTST---KMPEQGTCERCGYISSQKWCKAC 309
+ T+ K+ C C S C+ C
Sbjct: 311 LKTTHEARKLTSLHLCPSCQSPVSTTRCQCC 341
>gi|330508540|ref|YP_004384968.1| hypothetical protein MCON_2761 [Methanosaeta concilii GP6]
gi|328929348|gb|AEB69150.1| conserved hypothetical protein TIGR00269 [Methanosaeta concilii
GP6]
Length = 308
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 170/309 (55%), Gaps = 10/309 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+CS C +R +R +C++ F + FE + Q IV N++ + GERIA+ SGGKDS
Sbjct: 2 ICSLCQERAIVSQR-YLGRHLCQDHFIQDFEGRMVQTIVVNRMIEKGERIAVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
T L F LS + +++ L++DEGI+GYRDD++ KR Q G+ I+S+++ Y
Sbjct: 61 TALLFALSRVLAEKE--VEMVALTVDEGIAGYRDDTIVAAKRIARQMGVEQVIISFQEEY 118
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
GW++DE+V V CT+CGVFR+ AL+ A L V K+ATGHN DD A++V++N L+G
Sbjct: 119 GWSLDEMV-VGAEVAPCTYCGVFRKNALNCAAKSLGVTKLATGHNQDDEAQSVMMNYLKG 177
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ RL R + G IPR KP + EKEI YA + + S EC Y+ + R
Sbjct: 178 DMERLMRFR-PRREQPGLIPRIKPLRDIPEKEIAL-YAMVNGIYFESRECPYARLSLRAD 235
Query: 255 AREFIKDLERLRP---RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
R+ + +E L P + L + E +M E C CG K CKAC L
Sbjct: 236 VRDMMNRMESLFPGTRQKTLQGFERIEELCRGDWAQM-ELAECRECGEPCVGKRCKACEL 294
Query: 312 LEGLNRGLP 320
L L LP
Sbjct: 295 LGRLRPNLP 303
>gi|288559819|ref|YP_003423305.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288542529|gb|ADC46413.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 305
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 163/305 (53%), Gaps = 7/305 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C K +K+P + + +C++CF E E+++ Q I G+++ + SGGKDS
Sbjct: 4 CTKCGNPKIIIKKPASGQALCKDCFIESIEKKVRQTIKRENFIDRGDKVLVALSGGKDSV 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V +L+ RH +DL ++IDEGI+GYR+D ++ K + + G+P K+VS+K+ +G
Sbjct: 64 VTLDILNSYRERHI--IDLCAVTIDEGIAGYREDGVEIAKAHAERLGIPHKVVSFKESFG 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+DEI+ + +CT+CGVFRR ++R A KIATGHN DD + +L+N L G+
Sbjct: 122 IDLDEIMAKENHRGSCTYCGVFRRWIINRAARDFGATKIATGHNLDDETQAILMNYLEGN 181
Query: 196 IARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L++ T D + KP + EKEI YA K LD C Y+ ++R
Sbjct: 182 TENLAKIGPKTESNDELFTVKIKPLREIPEKEIGL-YAIAKGLDIHLAGCPYAEESFRME 240
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVL 311
+KDL + P + ++ + R + + CERCG SS + C+AC
Sbjct: 241 ISNILKDLTKDHPTIMYSTLRGFDKMRPAIKEEFKSNFVYKRCERCGEPSSNRLCRACTF 300
Query: 312 LEGLN 316
LE L+
Sbjct: 301 LEELD 305
>gi|297798104|ref|XP_002866936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312772|gb|EFH43195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 182
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 135/235 (57%), Gaps = 67/235 (28%)
Query: 5 ESKSKKAGG-RLCSTCNQRKA--ALKRPK-----TLEQIC-----RECFYEVFEEEIHQV 51
E+KSKKAG RLC C +R+ L P+ L +I RECFYEVFEEE HQV
Sbjct: 2 EAKSKKAGASRLCCLCFKRQFFFLLFLPRISCFWVLAKILSCTIYRECFYEVFEEETHQV 61
Query: 52 IVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSL 111
IV N+ + +AF Y D F + +
Sbjct: 62 IVQNECY------------------IAF----------YSFDGFFIFL------------ 81
Query: 112 QTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKV 171
QYGLP +IVSYKD+YGWTMD+IVK+IG KNNCTF A LLKV
Sbjct: 82 -------FQYGLPRQIVSYKDMYGWTMDDIVKMIGSKNNCTFLWCIPSTA------LLKV 128
Query: 172 DKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
DK+ GHNADDIAETVLLNILRGDIA LSRCT ITTGEDGPIPRCKPFKYT +K+
Sbjct: 129 DKLVAGHNADDIAETVLLNILRGDIA-LSRCTSITTGEDGPIPRCKPFKYTTKKD 182
>gi|387595768|gb|EIJ93391.1| hypothetical protein NEPG_01733 [Nematocida parisii ERTm1]
Length = 183
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 124/183 (67%), Gaps = 7/183 (3%)
Query: 138 MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIA 197
MD++V IG K+NCT+CGVFRR AL+ GA LL D IATGHNADDIAET+LLN RGD+
Sbjct: 1 MDKVVDKIGRKSNCTYCGVFRRGALEDGAKLLNGDMIATGHNADDIAETILLNYFRGDMN 60
Query: 198 RLSRCT--LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
RL +C + T IPRCKP YEKEI+ YA++ L YFSTEC YSP A+RG+A
Sbjct: 61 RLVKCAHPITQTTSKDVIPRCKPLADVYEKEIVM-YAFYNNLPYFSTECKYSPGAFRGYA 119
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS--QKWCKACVLLE 313
R +IK LE+ P++IL IIKSG++ + + E C+ CG S + CK+C+LL+
Sbjct: 120 RTYIKALEKTNPQSILKIIKSGKH--VQKHSHQMESHPCKECGKNCSGAEGVCKSCLLLK 177
Query: 314 GLN 316
L+
Sbjct: 178 SLS 180
>gi|14520709|ref|NP_126184.1| hypothetical protein PAB2029 [Pyrococcus abyssi GE5]
gi|5457925|emb|CAB49415.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi GE5]
gi|380741248|tpe|CCE69882.1| TPA: N-type ATP pyrophosphatase superfamily [Pyrococcus abyssi GE5]
Length = 323
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 168/302 (55%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R+A + C + F E+ E ++ + I ++ K GERI + SGGKDS
Sbjct: 3 CSKCG-REAVYFAKYEGKYYCHKHFNEMVESKVKRTIRKYRMIKKGERIGVAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L +R + ++ ++IDEGI GYRD S++ KRN G+ I +KD G
Sbjct: 62 VLLHLLAKLRKR--FPFEIVAITIDEGIKGYRDKSVEVAKRNAELLGVEHHIYRFKDYIG 119
Query: 136 WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DE V+++G + C++CGV+RR L++ A LKVDK+A G N DD + L+N+
Sbjct: 120 FTLDETVEIMGARGERLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNL 179
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+RGD+ARL R +G +PR KP + EKEI+ YA ++ +EC Y+ A
Sbjct: 180 MRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVL-YAVLNNIEVDLSECPYAVEA 238
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN---FRISTSTKMPEQGTCERCGYISSQKWCK 307
+R R+++ ++E P +++S + T K + C+ CG +S + CK
Sbjct: 239 FRAEIRDWLNEMEERHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICK 298
Query: 308 AC 309
AC
Sbjct: 299 AC 300
>gi|57641756|ref|YP_184234.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57160080|dbj|BAD86010.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 323
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + A T C++ F E+ E++ + + +L + GERIA+G SGGKDS
Sbjct: 3 CSKCG-KTAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI+GYR S++ KRN + G+ +I S+K+ G
Sbjct: 62 VLMHLLAKL--REKFPFELVAITIDEGIAGYRPPSVEIAKRNAKKLGIEHRIYSFKEYIG 119
Query: 136 WTMDEIVKVIGLKNN------CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+++G C++CGV+RR L+ A + DK+A GHN DD + L+
Sbjct: 120 FTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNYAAMDVGADKLAVGHNLDDEVQMFLM 179
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGDIARL R T E P +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 180 NILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIVL-YAVLNNIEVDLSECPYA 237
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R++I ++E P I++S + F + T K E C+ CG ++
Sbjct: 238 VEAFRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKKTSELNRCKICGQPTTG 297
Query: 304 KWCKAC 309
+ CKAC
Sbjct: 298 EICKAC 303
>gi|327401180|ref|YP_004342019.1| hypothetical protein Arcve_1298 [Archaeoglobus veneficus SNP6]
gi|327316688|gb|AEA47304.1| protein of unknown function UPF0021 [Archaeoglobus veneficus SNP6]
Length = 307
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 15/309 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN R+A + + +C++ F FE+ + + ++ ++G++IAI SGGKDS
Sbjct: 3 CSHCN-RQAVYYQRHSGRHLCKKHFIYDFEKRVRYAVKKYRMIESGDKIAIALSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYG----LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
L F L L YG ++ ++IDEGI GYR +++ + Q G+ IVS+K
Sbjct: 62 ALTFALDRL-----YGERKDVEFVAITIDEGIKGYRPPTVEIAREITSQLGIEHHIVSFK 116
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+ +G +DE+VK +G K CT+CGVFR+ L+R A L K+AT HN DD +T+LLN
Sbjct: 117 ENFGMALDEMVK-LGDKKPCTYCGVFRKYLLNRTARELGATKLATAHNLDDETQTILLNF 175
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
L+ DI RL+R + + G + R KPF+ YEKE++ Y L EC YS
Sbjct: 176 LQADIERLAR-LVPQRVQKGLVMRIKPFREIYEKEVV-VYCLLFDLPMDMNECPYSYFPV 233
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISSQKWCKAC 309
R R+F+ D E P +++S E P+ CE+CG + ++ C+AC
Sbjct: 234 RAAIRDFLYDFENKYPGRKYSVMRSFETLIPCLKEMFPQIDLNACEKCGEPTPKRVCQAC 293
Query: 310 VLLEGLNRG 318
VL E L R
Sbjct: 294 VLREELERA 302
>gi|326428140|gb|EGD73710.1| ATP-binding domain-containing protein 3 [Salpingoeca sp. ATCC
50818]
Length = 243
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 181 DDIAETVLLNIL--RGDIARL--SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
+++ ET++ L GD+ + S ITTGE G +PR KPFKYTYEKEI+ YAYFK+
Sbjct: 34 EEVHETIVSENLFTPGDVVAIGASGGKAITTGEGGDLPRSKPFKYTYEKEIVM-YAYFKK 92
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCER 296
LDYFSTEC YSPNAYRGFAR F+KDLE ++P +I+DII SGE + +P QGTC R
Sbjct: 93 LDYFSTECTYSPNAYRGFARTFLKDLETIKPSSIIDIIHSGEALHVKEEVTLPPQGTCIR 152
Query: 297 CGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKD 337
CGY++S CKACVLLEGLN+G PK+ + + R + R D
Sbjct: 153 CGYMTSSDLCKACVLLEGLNKGRPKLAVGKKRHEERLRADD 193
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LC+ C +AA++RPKT +CRECFY FEEE+H+ IV LF G+ +AIGASGGK
Sbjct: 2 KLCARCETSRAAMRRPKTGAALCRECFYAAFEEEVHETIVSENLFTPGDVVAIGASGGKA 61
Query: 74 STV 76
T
Sbjct: 62 ITT 64
>gi|341582453|ref|YP_004762945.1| PP family ATPase [Thermococcus sp. 4557]
gi|340810111|gb|AEK73268.1| PP family ATPase [Thermococcus sp. 4557]
Length = 323
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 172/306 (56%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A T CR+ F E+ E + + + +L + GERIA+G SGGKDS
Sbjct: 3 CSKCG-RDAVYHARYTGRYYCRKHFNELVERKFKETVKRYRLIEKGERIAVGVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI+GYR S++ KRN + G+ ++ S+K+ G
Sbjct: 62 VLMHLLAKL--REKFPFELIAITIDEGIAGYRPPSVEIAKRNAEKLGIEHRVYSFKEYMG 119
Query: 136 WTMDEIVKVIGLKNN------CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+++G C++CGV+RR L+ A ++ DK+A GHN DD + ++
Sbjct: 120 FTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNYAAKDVEADKLAVGHNLDDEVQMFVM 179
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGD+ARL R T E P +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 180 NILRGDVARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIVL-YAVLNNIEVDFSECPYA 237
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R++I ++E P I++S + F + T + E C+ CG ++
Sbjct: 238 VEAFRAEIRDWINEMEERHPGTKYQILRSYDKLFPLIARTYTKRTSELNRCKICGQPTTG 297
Query: 304 KWCKAC 309
+ CKAC
Sbjct: 298 EICKAC 303
>gi|281337548|gb|EFB13132.1| hypothetical protein PANDA_017848 [Ailuropoda melanoleuca]
Length = 307
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 152/256 (59%), Gaps = 9/256 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL EL R G+ L L+++DEGI GYRD +L + S+
Sbjct: 66 VLAHVLRELTPR--LGVSLRLVAVDEGIGGYRDAALAAGGGRRRAGTS--RSPSWPTQTS 121
Query: 136 WTMDEIVKVIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
G + CTFCGV RR+AL+ GA L+ I TGHNADD+AETVL+N L
Sbjct: 122 SGAGRWTPTAGTGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFL 181
Query: 193 RGD-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD L + GE G +PRC+P + +KE++ YA+F+RLDYFS EC+Y+P A+
Sbjct: 182 RGDAGRLARGGGLGSRGEGGALPRCRPLQLASQKEVVL-YAHFRRLDYFSEECVYAPEAF 240
Query: 252 RGFAREFIKDLERLRP 267
RG AR +K LE RP
Sbjct: 241 RGHARHLLKLLEAARP 256
>gi|212224843|ref|YP_002308079.1| ATPase [Thermococcus onnurineus NA1]
gi|212009800|gb|ACJ17182.1| ATPase [Thermococcus onnurineus NA1]
Length = 323
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A T C++ F E+ E++ + + +L + GERIA+G SGGKDS
Sbjct: 3 CSKCG-RPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L ++ + +L ++IDEGI+GYR S++ +RN + G+ I S+K+ G
Sbjct: 62 VLLHLLAKLQKK--FPFELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIG 119
Query: 136 WTMDEIVKVIGLKNN------CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+++G C++CGV+RR L+ A ++ DK+A GHN DD + ++
Sbjct: 120 FTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVEADKLAVGHNLDDEVQMFIM 179
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGDIARL R T E P +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 180 NILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIIL-YAVLNEIEVDLSECPYA 237
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R++I ++E P I++S + F + T + E C+ CG ++
Sbjct: 238 VEAFRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTG 297
Query: 304 KWCKAC 309
+ CKAC
Sbjct: 298 EICKAC 303
>gi|390961162|ref|YP_006424996.1| putative ATPase 2 [Thermococcus sp. CL1]
gi|390519470|gb|AFL95202.1| putative ATPase 2 [Thermococcus sp. CL1]
Length = 323
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN R A T C F E+ E++ + + +L + GERIA+G SGGKDS
Sbjct: 3 CSKCN-RPAVYHARYTGRYYCHRHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI+GYR S++ +RN + G+ +I S+K+ G
Sbjct: 62 VLLHLLAKL--REKFPFELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHRIYSFKEYIG 119
Query: 136 WTMDEIVKVIG------LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+++G C++CGV+RR L+ A ++ DK+A GHN DD + ++
Sbjct: 120 FTLDETVEIMGSFERGERVGACSYCGVWRRWLLNYAAKDVEADKLAVGHNLDDEVQMFIM 179
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGDIARL R T E P +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 180 NILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIVL-YAVLNGIEVDLSECPYA 237
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R+++ ++E P I++S + F + T K E C CG ++
Sbjct: 238 VEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYTKKTSELNRCRICGQPTTG 297
Query: 304 KWCKAC 309
+ CKAC
Sbjct: 298 EICKAC 303
>gi|223477482|ref|YP_002581731.1| PP-loop superfamily ATPase [Thermococcus sp. AM4]
gi|214032708|gb|EEB73537.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
Length = 325
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 172/307 (56%), Gaps = 17/307 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+CS C R A T C + F E+ E++ + + +L + GERIA+G SGGKDS
Sbjct: 4 VCSKCG-RPAVYHARYTGRYYCHKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VL +L++L R + +L ++IDEGI+GYR S++ KRN + G+ +I S+K+
Sbjct: 63 VVLMHLLAKL--REKFPFELVAITIDEGIAGYRPPSVEIAKRNAKKLGIEHRIYSFKEYI 120
Query: 135 GWTMDEIVKVIGLKNN------CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+T+DE V+++G C++CGV+RR L+ A + DK+A GHN DD + +
Sbjct: 121 GFTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNYAAKDVGADKLAVGHNLDDEVQMFI 180
Query: 189 LNILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+NILRGDIARL R T E P +PR KP + EKEI+ YA ++ +EC Y
Sbjct: 181 MNILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIVL-YAVLNNIEVDLSECPY 238
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISS 302
+ A+R R+++ ++E P I++S + F + T + E C+ CG ++
Sbjct: 239 AVEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTT 298
Query: 303 QKWCKAC 309
+ CKAC
Sbjct: 299 GEICKAC 305
>gi|14591444|ref|NP_143524.1| hypothetical protein PH1680 [Pyrococcus horikoshii OT3]
gi|3258109|dbj|BAA30792.1| 320aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 320
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 167/302 (55%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R+A + C + F E+ E ++ + I ++ K GERI + SGGKDS
Sbjct: 3 CSKCG-REAVYFAKYEGKYYCHKHFNEMVESKVKRTIRKYRMIKKGERIGVAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + ++ ++IDEGI GYRD S++ K+N G+ I +KD G
Sbjct: 62 VLLHLLAKL--RKKFPFEIVAITIDEGIKGYRDKSIKVAKKNAELLGVEHHIYRFKDYIG 119
Query: 136 WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DE V+++G + C++CGV+RR L++ A LKVDK+A G N DD + L+N+
Sbjct: 120 FTLDETVEIMGARGERLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQMFLMNL 179
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+RGD+ARL R +G +PR KP + EKEI+ YA ++ +EC Y+ A
Sbjct: 180 MRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVL-YAVLNNIEVDLSECPYAVEA 238
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN---FRISTSTKMPEQGTCERCGYISSQKWCK 307
+R R+++ ++E P +++S + T K + C+ CG +S + CK
Sbjct: 239 FRAEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKKVKLNRCKICGQPTSGEICK 298
Query: 308 AC 309
AC
Sbjct: 299 AC 300
>gi|409096316|ref|ZP_11216340.1| PP-loop superfamily ATPase [Thermococcus zilligii AN1]
Length = 324
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 176/323 (54%), Gaps = 17/323 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R+A T C F E+ E++ + + +L + GER+A+G SGGKDS
Sbjct: 5 CSKCG-RQAVYHARYTGRYYCHRHFNEMVEKKFKETVKKYRLIEKGERVAVGVSGGKDSV 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI+GYR S++ +RN + G+ ++ S+K+ G
Sbjct: 64 VLMHLLAKL--REKFPFELVAITIDEGIAGYRPASVEVARRNAKKLGIEHRVYSFKEYIG 121
Query: 136 WTMDEIVKVIG------LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+V+G C++CGV+RR L+ A + DK+A GHN DD + VL+
Sbjct: 122 FTLDETVEVMGSFEMGERVGACSYCGVWRRWLLNYAAKDVGADKLALGHNLDDEVQMVLM 181
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGDIARL R T E P +PR KP + EKE + YA ++ +EC Y+
Sbjct: 182 NILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKETLL-YAVLNSIEVDLSECPYA 239
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R+++ ++E P I++S + F + T K E C+ CG ++
Sbjct: 240 VEAFRAEIRDWLNEMEEKHPGTKYQILRSYDRLFPLIAKTYTKKTSELNRCKICGQPTTG 299
Query: 304 KWCKACVLLEGLNRGLPKMGIVR 326
+ CKAC + R + G R
Sbjct: 300 EICKACEFRLQVERKAKEAGPFR 322
>gi|332157910|ref|YP_004423189.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
gi|331033373|gb|AEC51185.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
Length = 323
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 167/302 (55%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + R + + C + F E+ E ++ + I ++ + GERI + SGGKDS
Sbjct: 3 CSKCGREAVYFARYEG-KYYCHKHFNEMVESKVKRTIRKYRMIRKGERIGVAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + ++ ++IDEGI GYRD S++ KRN G+ I +KD G
Sbjct: 62 VLLHLLAKL--RKKFPFEIVAITIDEGIKGYRDKSVEVAKRNAELLGVEHHIYRFKDYIG 119
Query: 136 WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DE V+++G + C++CGV+RR L++ A LKVDK+A G N DD + L+N+
Sbjct: 120 FTLDETVQIMGERGERLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNL 179
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+RGD+ARL R +G +PR KP + EKEI+ YA ++ +EC Y+ A
Sbjct: 180 MRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVL-YAVLNNIEVDLSECPYAVEA 238
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN---FRISTSTKMPEQGTCERCGYISSQKWCK 307
+R R+++ ++E P +++S + T + + C+ CG +S + CK
Sbjct: 239 FRAEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAREVKLNRCKICGQPTSGEICK 298
Query: 308 AC 309
AC
Sbjct: 299 AC 300
>gi|156088341|ref|XP_001611577.1| PP-loop family protein [Babesia bovis]
gi|154798831|gb|EDO08009.1| PP-loop family protein [Babesia bovis]
Length = 407
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 125/186 (67%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN+R L+R + CR+CF FE+E++ +I ++L G+ + IG SGGKDS+
Sbjct: 3 CARCNERPPTLRRCASRLPYCRQCFINEFEKEVYDLIEEHKLIVDGDVVCIGVSGGKDSS 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL+ L R++ L+LL+ DEGI GYRDDSL V LKI+++K+ +G
Sbjct: 63 VLAHVLATLKERYHRKWTLYLLAADEGIKGYRDDSLGVVMGMSNPNYDGLKILNFKERFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ MDE+V +IG KNNCT CG FRRQ L+ GA +L +K+ TGHN DD AETVLLNI R D
Sbjct: 123 FDMDEVVSLIGQKNNCTVCGTFRRQILEIGARMLGANKLCTGHNIDDNAETVLLNICRND 182
Query: 196 IARLSR 201
+ +L+R
Sbjct: 183 LFKLAR 188
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDII 274
R KP + YEKEI+ YA + L+YFSTECIY+P AYRG+ R FIK LE + PR I +I
Sbjct: 292 RIKPLMHCYEKEIVM-YARYLNLEYFSTECIYAPEAYRGYMRTFIKQLEAVDPRIIQNIT 350
Query: 275 KSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
S E F S + + C++CG CKAC+L+E L
Sbjct: 351 YSSEQFYASYLSNR-KVNVCKKCGIEGINDLCKACILVEKL 390
>gi|240102078|ref|YP_002958386.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239909631|gb|ACS32522.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 325
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A T C + F E+ E++ + + +L + GERIA+G SGGKDS
Sbjct: 5 CSKCG-RPAVYHARYTGRYYCHKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSV 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI+GYR S++ KRN + G+ +I S+K+ G
Sbjct: 64 VLMHLLAKL--REKFPFELVAITIDEGIAGYRPKSVEIAKRNARKLGIEHRIYSFKEYIG 121
Query: 136 WTMDEIVKVIG------LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V ++G C++CGV+RR L+ A + DK+A GHN DD + ++
Sbjct: 122 FTLDETVGIMGSFERGERVGACSYCGVWRRWLLNYAAKDVGADKLAVGHNLDDEVQMFIM 181
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
NILRGDIARL R T E P +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 182 NILRGDIARLGR-TGPYYEEIHPELVPRIKPLREIPEKEIVL-YAVLNNIEVDLSECPYA 239
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTST---KMPEQGTCERCGYISSQ 303
A+R R+++ ++E P I++S + F + T K E C+ CG ++
Sbjct: 240 VEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYTKKTSELNRCKICGQPTTG 299
Query: 304 KWCKAC 309
+ CKAC
Sbjct: 300 EICKAC 305
>gi|205689227|sp|A8MXG8.2|ABP3L_HUMAN RecName: Full=Putative ATP-binding domain-containing protein 3-like
protein
Length = 288
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 166/335 (49%), Gaps = 62/335 (18%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ A+L+RP + + +C CF FE E+ +++ L G +A+G SGGKDST
Sbjct: 6 CASCHVACASLRRPCSGQVLCGSCFCTAFEAEVQHMVLVGYLLPPGAVVALGTSGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L G+ L L+++D+GI + L G
Sbjct: 66 VLAHVLRTLA--PGLGILLQLMAVDKGIG--------------------------RGLAG 97
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + +G + CG R G S L V I GHNADD+ +TVL+N LRG
Sbjct: 98 GSQSLLKAHVG-----STCGSLRWS--KAGFSSLWVSDIILGHNADDMVDTVLMNFLRGG 150
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
G +PRC+P ++ ++ + Y +F+RLDYFS E A
Sbjct: 151 WP-----------GGGALPRCRPLQFASQEVV--PYGHFRRLDYFSEE---------RSA 188
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R+ +K LE RP A+LD++ S E ++++ + P G C RCG ++S+ C+AC LL+GL
Sbjct: 189 RDLLKRLEAPRPSAVLDLVHSAERLALASAARPPRPGACPRCGALASRALCQACSLLDGL 248
Query: 316 NRGLPKMGIVRSRGQNNERTKDMKQNKGTKNIESK 350
NRG P++ I + R R D + GT ++
Sbjct: 249 NRGRPRLAIGKGR-----RGLDEEATPGTPGDPAR 278
>gi|156088345|ref|XP_001611579.1| hypothetical protein [Babesia bovis T2Bo]
gi|156088349|ref|XP_001611581.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798833|gb|EDO08011.1| conserved hypothetical protein [Babesia bovis]
gi|154798835|gb|EDO08013.1| conserved hypothetical protein [Babesia bovis]
Length = 253
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 125/186 (67%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CN+R L+R + CR+CF FE+E++ +I ++L G+ + IG SGGKDS+
Sbjct: 3 CARCNERPPTLRRCASRLPYCRQCFINEFEKEVYDLIEEHKLIVDGDVVCIGVSGGKDSS 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL+ L R++ L+LL+ DEGI GYRDDSL V LKI+++K+ +G
Sbjct: 63 VLAHVLATLKERYHRKWTLYLLAADEGIKGYRDDSLGVVMGMSNPNYDGLKILNFKERFG 122
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ MDE+V +IG KNNCT CG FRRQ L+ GA +L +K+ TGHN DD AETVLLNI R D
Sbjct: 123 FDMDEVVSLIGQKNNCTVCGTFRRQILEIGARMLGANKLCTGHNIDDNAETVLLNICRND 182
Query: 196 IARLSR 201
+ +L+R
Sbjct: 183 LFKLAR 188
>gi|375081973|ref|ZP_09729044.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
gi|374743325|gb|EHR79692.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
Length = 321
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 162/283 (57%), Gaps = 12/283 (4%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C + F E+ E ++ Q + L K G+RIA+G SGGKDS VL +L +L+++ + ++
Sbjct: 22 CHKHFNEMVESKVKQTVRKYGLIKRGDRIAVGVSGGKDSVVLLHILHKLSQK--FPFEII 79
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN----- 150
++IDEGI+GYR +S++ K+N G+ +I S+K+ G+T+DE V ++G
Sbjct: 80 AITIDEGIAGYRPESVEIAKKNAKMLGVEHRIYSFKEYIGFTLDETVNIMGSFEKGERVG 139
Query: 151 -CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTG 208
C++CGV+RR L+ A + DK+A GHN DD + L+NI+RGD+ARL R
Sbjct: 140 ACSYCGVWRRWLLNYAAQDVNADKLAVGHNLDDEVQMFLMNIMRGDVARLGRTGPYYEVI 199
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+G +PR KP + EKEI+ YA ++ +EC Y+ A+R R++I ++E P
Sbjct: 200 HEGLVPRIKPLREVPEKEIVL-YAVLNNIEVDFSECPYAVEAFRAEIRDWINEMEEKHPG 258
Query: 269 AILDIIKSGENF--RISTSTKMPEQGTCERCGYISSQKWCKAC 309
I++S + ++ + + C+ CG ++ + CKAC
Sbjct: 259 TKYQILRSYDKMFPLLAKAYAHRDLNRCKICGQPTTGEICKAC 301
>gi|449676050|ref|XP_002162174.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like, partial
[Hydra magnipapillata]
Length = 193
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
G DG +PRCKPFKYTYEKEI+ YAYFK+LDYF+TECIYSPNAYRG AR F+KDLE +RP
Sbjct: 1 GVDGALPRCKPFKYTYEKEIVM-YAYFKKLDYFTTECIYSPNAYRGHARTFLKDLEAIRP 59
Query: 268 RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
I+DII SGE+ + +MP QG C +CGYISS+ C AC++LEGLN+GLP++GI
Sbjct: 60 SCIIDIIHSGESMSVKKEVRMPTQGICTKCGYISSRPLCTACIMLEGLNKGLPRLGI 116
>gi|337284013|ref|YP_004623487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
gi|334899947|gb|AEH24215.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
Length = 323
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + R + C F E+ E ++ I Q+ + GE+I + SGGKDS
Sbjct: 3 CSKCGREAVYFARYEG-RYYCHRHFNEMVERKVKATIRKYQMIRRGEKIGVAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R+ + +L ++IDEGI GYRD S++ KRN G+ I S++D G
Sbjct: 62 VLMHLLAKLRRK--FPFELVAITIDEGIRGYRDRSVEIAKRNAELLGIEHHIYSFRDYIG 119
Query: 136 WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
T+DE V+++G + C++CGV+RR L+ A L VDK+A G N DD + L+N+
Sbjct: 120 LTLDETVEIMGPREERVGACSYCGVWRRWLLNCAARELGVDKLAVGLNLDDEVQMFLMNL 179
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+RGD+ARL R +G +PR KP + EKEI+ YA ++ +EC Y+ A
Sbjct: 180 MRGDVARLGRTGPYYEEIHEGLVPRIKPLREVPEKEIVL-YAVLNDIEVDLSECPYAVEA 238
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTSTKMPEQGT--CERCGYISSQKWCK 307
+R R+++ ++E P +++S + F + T E G C+ CG ++ K CK
Sbjct: 239 FRAEIRDWLNEMEEKHPGTKYQLLRSYDRLFPLIAKTYAREIGLNRCKLCGQPTAGKICK 298
Query: 308 AC 309
AC
Sbjct: 299 AC 300
>gi|242399147|ref|YP_002994571.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242265540|gb|ACS90222.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 331
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 162/283 (57%), Gaps = 12/283 (4%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C + F E+ E ++ Q + L K G+RIA+G SGGKDS VL +L +L+++ + ++
Sbjct: 32 CHKHFNEMVESKVKQTVRKYGLIKRGDRIAVGVSGGKDSVVLLHILHKLSQK--FPFEII 89
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN----- 150
++IDEGI GYR +S++ KRN + G+ KI S+K+ G+++DE V ++G
Sbjct: 90 AITIDEGIEGYRPESVEIAKRNAKKLGIEHKIYSFKEYIGFSLDETVSIMGSFEKRERVG 149
Query: 151 -CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTG 208
C++CGV+RR ++ A L+ DK+A GHN DD + L+N++RGD+ARL R
Sbjct: 150 ACSYCGVWRRWLINYAAQDLEADKLAVGHNLDDEVQMFLMNVMRGDVARLGRTGPYYEVI 209
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+G +PR KP + EKEI+ YA ++ +EC Y+ A+R R++I ++E P
Sbjct: 210 HEGLVPRIKPLREVPEKEIVL-YAILNNIEVDFSECPYAVEAFRAEIRDWINEMEEKHPG 268
Query: 269 AILDIIKSGENF--RISTSTKMPEQGTCERCGYISSQKWCKAC 309
I++S + ++ + + C+ C ++ + CKAC
Sbjct: 269 TKYQILRSYDKMFPLLAKAYANRDLNRCKICDQPTTGEVCKAC 311
>gi|18978130|ref|NP_579487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|397652593|ref|YP_006493174.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
gi|18893931|gb|AAL81882.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
gi|393190184|gb|AFN04882.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
Length = 319
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + R + C + F E+ E ++ + I ++ K GE++ + SGGKDS
Sbjct: 3 CSKCGREAIYFARYEG-RYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + +L ++IDEGI GYRD S++ ++N G+ I +KD G
Sbjct: 62 VLMHILAKL--RKKFPFELVAITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIG 119
Query: 136 WTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DE V+++G + C++CGV+RR L++ A L VDK+A G N DD + L+N+
Sbjct: 120 FTLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVDKLALGLNLDDEVQVFLMNL 179
Query: 192 LRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+RGD+ARL R +G +PR KP + EKEI+ YA ++ +EC Y+ A
Sbjct: 180 MRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVL-YAVLNNIEVDLSECPYATEA 238
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN---FRISTSTKMPEQGTCERCGYISSQKWCK 307
+R R+++ ++E P +++S + T K + C+ CG +S + CK
Sbjct: 239 FRAEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICK 298
Query: 308 AC 309
AC
Sbjct: 299 AC 300
>gi|304314090|ref|YP_003849237.1| ATPase [Methanothermobacter marburgensis str. Marburg]
gi|302587549|gb|ADL57924.1| predicted ATPase [Methanothermobacter marburgensis str. Marburg]
Length = 314
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 168/309 (54%), Gaps = 10/309 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + + R + + +C ECF E +++ + I L + G+R+ +G SGGKDS
Sbjct: 3 CTRCGSERVIINRKYSGQMLCGECFIETTRKKVMKDIRKYGLIERGDRVLVGLSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
++ +L EL R+ ++L ++IDEGISGYR+D ++ R + G+P ++V KD G
Sbjct: 63 MVTDILDELRNRNI--IELEAVTIDEGISGYREDGIRAAGRFCAERGIPHRVVKLKDYAG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEI+K + CT+CGVFRR L+R A KIATGHN DD + +++N L G+
Sbjct: 121 ITLDEIMKNPS-RGACTYCGVFRRWILNREARKSGATKIATGHNLDDECQAIVMNYLEGN 179
Query: 196 IARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R +T+ G IP+ KP + E+E+ Y + LD C Y+ ++R
Sbjct: 180 LENLTRIGPVTSTAGGRFIPKIKPLREIPEREVGL-YVLARGLDVHLAGCPYASGSFRRE 238
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMP---EQGTCERCGYISSQKWCKACVL 311
+F+K + RP + ++ + + S M + GTC CG SS + CKAC
Sbjct: 239 IGDFLKQISVKRPTIMYSTLRGFDKIKESLIKDMHGGRKSGTCLICGEPSSGRLCKACTF 298
Query: 312 LE--GLNRG 318
+ G+N G
Sbjct: 299 INELGVNEG 307
>gi|333988106|ref|YP_004520713.1| hypothetical protein MSWAN_1903 [Methanobacterium sp. SWAN-1]
gi|333826250|gb|AEG18912.1| protein of unknown function UPF0021 [Methanobacterium sp. SWAN-1]
Length = 311
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 167/307 (54%), Gaps = 11/307 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ C +K+ ++ +++CRECF E +E++ I +L + G+++ +G SGGKDS
Sbjct: 3 VCTKCGNPHVIIKKKQSGQKLCRECFIETTKEKVLHDIRKYKLIEKGDKVLLGLSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+L +L+ L R+ +DL ++IDEGI+GYR+D ++ N + G+ +IVS+KD +
Sbjct: 63 VMLLDILNSLKERNI--IDLVAVTIDEGITGYREDGVRIAASNAEKLGVKHRIVSFKDYF 120
Query: 135 GWTMDEIVK----VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
G T+D+IV+ + ++ CT+CGVFRR L++ A KIATGHN DD E++L+N
Sbjct: 121 GLTLDDIVEKDSDLARSRHPCTYCGVFRRWFLNKVAKEEGATKIATGHNLDDETESILMN 180
Query: 191 ILRGDIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
L G+I L+R + + + KP EKEI Y K +D C Y+
Sbjct: 181 YLEGNIRNLTRIGPKSESRNKEFTVKIKPLSEIPEKEIGL-YVVAKGMDVHFAGCPYAGE 239
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---GTCERCGYISSQKWC 306
++R +FIKDL P + ++ E + + + G C CG +S C
Sbjct: 240 SFRAEIGKFIKDLSVEHPTIMYSTLRGFEKIKPVLKNEFANESSTGVCVNCGEPASGDLC 299
Query: 307 KACVLLE 313
KAC L+
Sbjct: 300 KACSFLK 306
>gi|56757069|gb|AAW26706.1| SJCHGC06956 protein [Schistosoma japonicum]
Length = 145
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
+NILRGDI RL RC I TG D +PR KPFKY YEKEI+ YA+ +LDYFSTEC Y+P
Sbjct: 1 MNILRGDIGRLKRCAAIMTGTDDILPRFKPFKYAYEKEIVM-YAHMHKLDYFSTECRYAP 59
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
AYRG R FIK+LER+RPR I+DII SGE I KMP++ C +CG ISSQ C+A
Sbjct: 60 QAYRGHVRSFIKELERIRPRTIIDIIASGERMAIRGDVKMPQKNACRKCGCISSQPICQA 119
Query: 309 CVLLEGLNRGLPKMGI 324
C+LL LN GLP++ I
Sbjct: 120 CILLTQLNSGLPQITI 135
>gi|315231685|ref|YP_004072121.1| n-type ATP pyrophosphatase [Thermococcus barophilus MP]
gi|315184713|gb|ADT84898.1| n-type ATP pyrophosphatase [Thermococcus barophilus MP]
Length = 321
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 173/318 (54%), Gaps = 13/318 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R+A + C + F E+ E+++ Q + ++ K GERIA+G SGGKDS
Sbjct: 3 CSKCG-REAVYHARYEGKYYCHKHFNEMVEKKVKQTVRKYRMIKRGERIAVGVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +L++L R + ++ ++IDEGI GYR S++ K+N G+ + S+K+ G
Sbjct: 62 VLLHLLAKL--RKKFPFEIVAITIDEGIEGYRPPSVEIAKKNAELLGIEHHVYSFKEYIG 119
Query: 136 WTMDEIVKVIGLKNN------CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
+T+DE V+++G C++CGV+RR L+ A ++ DK+A G N DD A+ L+
Sbjct: 120 FTLDETVQIMGSFEKGERVGACSYCGVWRRWLLNYAAQDVQADKLAIGLNLDDEAQVFLM 179
Query: 190 NILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
NI+RGDIARL R + +PR KP + EKEI+ YA ++ +EC Y+
Sbjct: 180 NIMRGDIARLGRTGPYYEVIHEDLVPRIKPLREVPEKEIVL-YAVLNNIEVDFSECPYAV 238
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWC 306
A+R R+++ ++E P I++S + ++ E C+ CG ++ + C
Sbjct: 239 EAFRAEIRDWLNEMEEKHPGTKYQILRSYDKLFPILAKHYAKRELNRCKICGQPTTGEIC 298
Query: 307 KACVLLEGLNRGLPKMGI 324
KAC + + ++G+
Sbjct: 299 KACQFKLQVQKKAKELGL 316
>gi|288932186|ref|YP_003436246.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
gi|288894434|gb|ADC65971.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
Length = 302
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 162/298 (54%), Gaps = 7/298 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C+ + +R + +C++ F F + + + ++ ++G++IA+ SGGKDS
Sbjct: 3 CSLCSSKAVYYQRHSS-RHLCKKHFLRDFYRRVKRAVAKYKMIESGDKIALAMSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA L EL + L+ F ++IDEGI GYR +++ K+ G+ +VS+++ G
Sbjct: 62 TLAHTLIELYGKRR-DLEFFAITIDEGIEGYRPPTVEIAKKVCRDLGIEHVVVSFREEIG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+DE+V+ G +N CT+CGVFR+ L+R A L K+ATGHN DD +T+LLN L D
Sbjct: 121 LDLDEMVER-GSRNACTYCGVFRKYLLNRTARELGATKLATGHNLDDETQTILLNFLNAD 179
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
I RL+R + + G + R KP + YEKE++ YA L EC YS R
Sbjct: 180 IERLAR-LIPQRVQKGLVYRIKPLREIYEKEVV-VYAIINNLPVSLEECPYSRFPARALV 237
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMP--EQGTCERCGYISSQKWCKACVL 311
R+FI + E+ P I++S E P E G C+ CG ++++ CKAC L
Sbjct: 238 RDFIYEFEKKYPGRKFSIMRSFEELLPCLHKMYPQVELGECKICGEPTAREICKACEL 295
>gi|124485791|ref|YP_001030407.1| hypothetical protein Mlab_0970 [Methanocorpusculum labreanum Z]
gi|124363332|gb|ABN07140.1| PP-loop domain protein [Methanocorpusculum labreanum Z]
Length = 300
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 164/304 (53%), Gaps = 11/304 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+CS C +KA P T ++ C E F FE + I ++ + G+RIA+G SGGKDS
Sbjct: 4 MCSRCG-KKAVYVDPVTKQRFCGEHFSTWFEAGVSAAIEKYRMIEPGDRIAVGLSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
TVL VL++L+ +L +++DEGI GYRDD++ R + GL ++VS+ D+
Sbjct: 63 TVLLTVLAKLD----LDAELIPITVDEGIGGYRDDTILAATRLCDKLGLADRLVSFTDIC 118
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DE++ + C+ CG RR+AL++ A + KIATGH DD A++VL+N LRG
Sbjct: 119 GKTLDELLSN-DPRQACSVCGTLRRRALNQAAREVGATKIATGHCLDDEAQSVLMNYLRG 177
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ R++ + T + +PR KP E+E + Y RL EC Y+ A R
Sbjct: 178 DVTRVTG-SYRTNADTLFLPRIKPLCRATERETV-AYGIVNRLLTDLPECPYTKYALRAD 235
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE---QGTCERCGYISSQKWCKACVL 311
R+ + LE P +++I+ E + E G CE CG +S + C AC L
Sbjct: 236 VRKGLGKLEYTTPGTMMNIVTGQEKLLAKLGPREGEITMMGRCELCGEPTSHRLCAACAL 295
Query: 312 LEGL 315
LE L
Sbjct: 296 LEKL 299
>gi|147921431|ref|YP_684755.1| ATPase [Methanocella arvoryzae MRE50]
gi|110620151|emb|CAJ35429.1| predicted ATPase (PP-loop superfamily) [Methanocella arvoryzae
MRE50]
Length = 308
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 8/299 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN+ +R + +C E +I + + ++ K G+ IA+ SGGKDS
Sbjct: 3 CDKCNREAVIFQRYSGM-HLCGPHEVADVERKIKRRMRKERMAKPGDHIAVAMSGGKDSA 61
Query: 76 V-LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V L+ ++ R N + +++DEGI GYR++S+ K + G+P +VS+K+
Sbjct: 62 VTLSILVDTFTTRSN--IKFSAITVDEGIEGYRNESIPYAKELCDRLGVPHYVVSFKEEI 119
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+D+I+ + +CT+CGVFRR L+R A + +K+ATGHN DD A+ VLLN++ G
Sbjct: 120 GHTLDDILSRERKEASCTYCGVFRRTLLNRKAREIGANKLATGHNLDDEAQVVLLNVMNG 179
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ RL+R + ++G IPR KP EKEI YA+ K+L ++ EC Y+ ++RG
Sbjct: 180 DVERLARLR-PSRAQEGLIPRIKPLIDVPEKEIAL-YAFLKKLPFYMGECPYTSESFRGE 237
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACVL 311
++ + D E P ++ EN K P+ CE CG Q C+AC L
Sbjct: 238 IKDMLNDFEARHPGTKYSVLSGFENMIDCLKEKYPQVPLHNCEVCGEPGIQGVCQACKL 296
>gi|408382222|ref|ZP_11179768.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
gi|407815229|gb|EKF85849.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
Length = 307
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 166/299 (55%), Gaps = 7/299 (2%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C + +KR ++ + +C+ECF +E++ + I +L + G+++ + SGGKDS
Sbjct: 3 VCHKCGNPQIIIKRKQSGQMLCQECFINTVQEKVLKDIRKQKLVEKGDKVLVALSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+L +L+ L +R +DL ++IDEGI GYR+D ++ +N G+ +IVS+KD
Sbjct: 63 VMLLDILNNLRKRKI--IDLVAVTIDEGICGYREDGVEIAAQNAELIGVKHRIVSFKDYV 120
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DEI++ G + CT+CGVFRR ++ A KIATGHN DD A+++L+N + G
Sbjct: 121 GHTLDEIMEDTGDRIACTYCGVFRRWIFNQVAREEGATKIATGHNLDDEAQSILMNYMEG 180
Query: 195 DIARLSRCTLIT-TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+I L+R + + + +G + KP + E+E Y + L C Y+ +++R
Sbjct: 181 NIQNLTRIGVKSESSYEGFTVKIKPLREIPERETAL-YVVARDLPVHLAGCPYAGDSFRA 239
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---GTCERCGYISSQKWCKAC 309
R+F+KD+ + P + ++ + + + + G C CG ++ K CKAC
Sbjct: 240 KIRDFLKDISQDHPTIMYSTLRGFDKIKPVLKEEFSRKATTGVCAECGEPAAGKLCKAC 298
>gi|312136595|ref|YP_004003932.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311224314|gb|ADP77170.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 306
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 163/303 (53%), Gaps = 7/303 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KR + +++C++CF E ++++ + I N+L + G+R+ G SGGKDS
Sbjct: 3 CMKCGSKDVVFKRRYSSQRLCKDCFIEFIQKKVLRNIRLNKLIEKGDRVLAGVSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ +L+ L+ R ++L +L++DEGI YR+ +L+ K + + G+P IV +KD +G
Sbjct: 63 AMLDILNILHERGI--IELEVLTVDEGIKNYREKTLEIAKYHTKRLGIPHHIVKFKDCFG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEIV + CT+CGVFRR ++ L+ DKIA HN DD E +L+N L G+
Sbjct: 121 ITLDEIVSSNVERGPCTYCGVFRRWIFNKIGKKLEADKIAIAHNLDDETEAILMNYLEGN 180
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
I L R I+ +D + + KP + E EI+ Y FK L + C Y A+R
Sbjct: 181 IKNLIRLGPISESKDF-LTKIKPLREIPENEIIL-YTKFKGLKTYLKPCPYVRYAFRREI 238
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---GTCERCGYISSQKWCKACVLL 312
FIK + P I++ E + K E+ TC+ CG +S K C+AC L
Sbjct: 239 YRFIKRISAKHPTIRYSILRGFEKIKPILKEKFQEKYTFDTCKICGEPASGKICQACKLC 298
Query: 313 EGL 315
+ L
Sbjct: 299 KEL 301
>gi|154270042|ref|XP_001535892.1| hypothetical protein HCAG_09200 [Ajellomyces capsulatus NAm1]
gi|150413777|gb|EDN09157.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 297
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 117/173 (67%), Gaps = 19/173 (10%)
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+PL+IV Y V K NCT+CGVFRRQ L GA+ L + + TGHNADD
Sbjct: 1 MPLEIVGY-----------VVRDRTKGNCTYCGVFRRQRLTGGAAKLGIGHVVTGHNADD 49
Query: 183 IAETVLLNILRGDIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+AET+++N+LRGD+ RL+R T ++T I R KP KY YEKEI+ YA++++L YFS
Sbjct: 50 VAETIVMNLLRGDLPRLARSTNIVTESSASDIKRSKPLKYAYEKEIVL-YAHYQKLCYFS 108
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN------FRISTSTKM 288
TECIYSP A+RG AR IKDLE++RP +ILDI++SGE+ IS S+K+
Sbjct: 109 TECIYSPEAFRGSARTLIKDLEKVRPSSILDIVRSGEDMASLVPLEISRSSKL 161
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGI 324
CERCGY++SQ+ CKAC+LLEGLN+ PK I
Sbjct: 239 CERCGYMASQRICKACMLLEGLNKNRPKTTI 269
>gi|410720556|ref|ZP_11359911.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
gi|410600844|gb|EKQ55368.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
Length = 307
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 166/299 (55%), Gaps = 7/299 (2%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C + +KR ++ + +C+ECF + +E++ + I +L + G+++ + SGGKDS
Sbjct: 3 VCHKCGNPQIIIKRKQSGQMLCQECFIKFIQEKVLRDIRKQKLVEKGDKVLVALSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+L +L+ L +R +DL ++IDEGI GYR++ ++ +N G+ +IVS+KD
Sbjct: 63 VMLLDILNNLRKRRI--IDLVAVTIDEGICGYREEGVEIAAQNAELIGVKHRIVSFKDYI 120
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DEI+ G + CT+CGVFRR ++ A +IATGHN DD A+++++N + G
Sbjct: 121 GHTLDEIMADTGDRIACTYCGVFRRWIFNQVAREEGATRIATGHNLDDEAQSIIMNYMEG 180
Query: 195 DIARLSRCTLIT-TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+I L+R + + + +G + KP + E+E Y + L C Y+ +++R
Sbjct: 181 NIQNLTRIGVKSESSYEGFTVKIKPLREIPERETAL-YVMARDLPVHLAGCPYAGDSFRA 239
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTS---TKMPEQGTCERCGYISSQKWCKAC 309
R+F+K++ + P + ++ + + ++ G C CG ++ K CKAC
Sbjct: 240 KIRDFLKEISQDHPTIMYSTLRGFDKIKPVLKEEFSRKSSTGVCAECGEPAADKLCKAC 298
>gi|408403438|ref|YP_006861421.1| ATPase, PP-loop superfamily [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364034|gb|AFU57764.1| putative ATPase, PP-loop superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 315
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 17/306 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
CS C + ++ R + E +C++CF E++ + I + G+R+A+G SGGKDS
Sbjct: 2 FCSKCQKAESVYHRAYSGEYLCKKCFMRSIEDKAAKTISKYSMIGYGDRVAVGVSGGKDS 61
Query: 75 TVLAFVLSELNRRH-NYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L +VL L +H N G +L ++IDEGI GYRD+SL+ V+ Q G+ K++SYK L
Sbjct: 62 LSLLYVLKALFEQHPNNGNELVAVTIDEGIKGYRDESLRIVRDFCAQLGVESKVLSYKSL 121
Query: 134 YGWTMDEIVKVIGLK---NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+G MDE + + + ++C+ CG FRR+A+D A + D +AT HN DD +T ++N
Sbjct: 122 FGVDMDEAMVLRPSEKKISSCSICGTFRRRAIDIAAETVGADVVATAHNMDDQLQTFMIN 181
Query: 191 ILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
+L GD+ R+ + + + KPF YE EI F YA + + + S EC Y
Sbjct: 182 LLAGDVERIGWIYPEPVQYANNRMKKVKPFIEIYEYEIAF-YALQREIPFQSEECPYMNE 240
Query: 250 AYRGFAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMP-EQG-TCERCGYISSQ 303
+ R REF +E+ P A ++K + R +P +QG C CG S+
Sbjct: 241 SIRTDLREFFNRMEKAHPGIKHNAYNSMMKVSKTLR-----NIPGDQGKKCSVCGRDSTG 295
Query: 304 KWCKAC 309
C C
Sbjct: 296 DVCSVC 301
>gi|424819640|ref|ZP_18244713.1| PP-loop domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|326422516|gb|EGD71912.1| PP-loop domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 301
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 12/280 (4%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C E F + FE+ I +L K GE++A+ SGGKDS L ++L++ +++N ++
Sbjct: 19 LCTEHFKKRFEDITLNTIKKYKLIKKGEKVAVANSGGKDSLSLLYILAKYFKKNN---EI 75
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN--CT 152
++IDEGI GYRD +++ +KR +YG+ KI SYKDL G TMD I LK C
Sbjct: 76 VSITIDEGIKGYRDKTIEIMKRYCDEYGIKYKIYSYKDLTGKTMDYIA---SLKKGIPCA 132
Query: 153 FCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT--TGED 210
CGV RR ++ A K DK+AT HN DD AE V++N+++ D+ +++R + E+
Sbjct: 133 ACGVLRRYLINYAAKDNKADKLATAHNLDDEAENVIMNLVQNDVEKMTRLGAYSGVVKEE 192
Query: 211 GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAI 270
IPR KPF + EKE M Y+ +D T C Y+ +RG IK+ E +
Sbjct: 193 EFIPRIKPFIFLGEKETML-YSMLNGIDAIHTPCPYAGYGFRGLVSRSIKEFETKYSGSK 251
Query: 271 LDIIKSGENFRIS-TSTKMPEQGTCERCGYISSQKWCKAC 309
+++ + N + S + K+ C +CG+ S ++ C+AC
Sbjct: 252 RNVVNTMLNVKESRKNLKVKNVNKCIQCGFPSVKEICEAC 291
>gi|354504000|ref|XP_003514067.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cricetulus
griseus]
Length = 252
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
TGHNADD+AETVL+N LRGD RL+R ++ + GE +PRC+P ++ +KE++ YA+F
Sbjct: 43 TGHNADDMAETVLMNFLRGDAGRLARGGVLGSAGEGCALPRCRPLQFASQKEVVL-YAHF 101
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTC 294
+RL YFS EC+Y+P A+RG AR+ +K LE RP A+LD++ S + + + P GTC
Sbjct: 102 RRLRYFSEECVYAPEAFRGHARDLLKRLEAARPSAVLDLVHSAXXLALPPAARPPPPGTC 161
Query: 295 ERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
RCG ++S C+AC LL+GLNRGLP++ I + R
Sbjct: 162 SRCGALASHTLCQACALLDGLNRGLPRLAIGKGR 195
>gi|435851183|ref|YP_007312769.1| TIGR00269 family protein [Methanomethylovorans hollandica DSM
15978]
gi|433661813|gb|AGB49239.1| TIGR00269 family protein [Methanomethylovorans hollandica DSM
15978]
Length = 302
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 10/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R + +C++ F E E +I I + + E IA+ SGGKDS+
Sbjct: 5 CDKCKHDSIIYQRYSGM-HLCKKHFMEDVERKIKLTIRKHYSVRKNETIAVAVSGGKDSS 63
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V+ ++L + L R + + L LS+DEGI+GYR ++L+ K + G+ I+S+++ Y
Sbjct: 64 VMLYMLHKILGARPD--IRLIALSVDEGIAGYRHNTLEQAKGLTSRLGVEHIILSFREQY 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
TMDEI + K C++CGV R+ L+R A L K+A GHN DD A+T+++N L+G
Sbjct: 122 ERTMDEIASLEREKGTCSYCGVLRKSILNRKALELGATKLAIGHNLDDEAQTIMMNHLKG 181
Query: 195 DIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+AR+ R L+ E +G + R KP +Y EKE+ YAY L + C Y+ A R
Sbjct: 182 DVARMVR--LVPPCELEGLVLRIKPLRYIPEKEVAM-YAYLNGLPLSTGACPYAHEAMRN 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP--EQGTCERCGYISSQKWCKACVL 311
RE + D E P ++ + S ++P + +C CG S + C+AC L
Sbjct: 239 EVREMLDDFEDKHPGTKYSLLSGFDKIANVLSREIPIAKLASCRLCGQACSSELCQACKL 298
Query: 312 L 312
L
Sbjct: 299 L 299
>gi|343485387|dbj|BAJ51041.1| ATPase [Candidatus Caldiarchaeum subterraneum]
Length = 308
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 162/306 (52%), Gaps = 14/306 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+CS C KA R + E++CR CF + FE+ + + I +LF+ ++IA+ SGGKDS
Sbjct: 10 VCSVCRGGKAVYYRVYSGERLCRTCFVKTFEKRVIRTIGRYKLFRPDDKIAVAVSGGKDS 69
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +VL ++ +R L +++DEGI GYRD++L+ V+ +PL S+++ +
Sbjct: 70 LSLLYVLKKIEKRFPRA-GLVAVTVDEGIEGYRDEALEYVEEVTRMLEVPLYKTSFEEAF 128
Query: 135 GWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
G ++ EIV +++ C+ CG RR+A++ A IAT H DD+ +T L
Sbjct: 129 GKSLSEIVASKQFRSSGLAACSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQTYFLK 188
Query: 191 ILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
RG++ + I +GP IPR PF+ T E+E++F YAY + + S C +
Sbjct: 189 TFRGELG----TSEIGLRLEGPFIPRVAPFRLTPEREVVF-YAYLHNIPFQSQVCPNAAT 243
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ R R F+ + + P ++ ++S E +T+ Q C CG SS++ C+ C
Sbjct: 244 SMRNMIRRFLAEFDERYPGSLFAALRSFEK---TTTLGKKMQRVCSYCGEPSSRELCRVC 300
Query: 310 VLLEGL 315
L + L
Sbjct: 301 ELTQTL 306
>gi|389852979|ref|YP_006355213.1| hypothetical protein Py04_1567 [Pyrococcus sp. ST04]
gi|388250285|gb|AFK23138.1| hypothetical protein Py04_1567 [Pyrococcus sp. ST04]
Length = 273
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 144/254 (56%), Gaps = 11/254 (4%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
+ SGGKDS VL +L++L R + +L ++IDEGI GYRD S++ K+N G+
Sbjct: 1 MAVSGGKDSVVLMHLLAKL--RKKFPFELVAITIDEGIKGYRDKSVEVAKKNAELLGIEH 58
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
I +KD G+T+DE V+++G + C++CGV+RR L++ A LKVDK+A G N D
Sbjct: 59 HIYRFKDYIGFTLDETVEIMGPRGERVGACSYCGVWRRWLLNKAAEELKVDKLALGLNLD 118
Query: 182 DIAETVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D + L+N++RGDIARL R +G IPR KP + EKEI+ YA ++
Sbjct: 119 DEVQVFLMNLMRGDIARLGRTGPYYEVIHEGLIPRIKPLREVPEKEIVL-YAVLNNIEVD 177
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN---FRISTSTKMPEQGTCERC 297
+EC Y+ A+R R+++ ++E P +++S + T K + C+ C
Sbjct: 178 LSECPYAVEAFRAEIRDWLNEMEEKHPGTKYQLLRSYDKLFPLLAKTYAKEVKLNRCKIC 237
Query: 298 GYISSQKWCKACVL 311
G +S + CKAC+
Sbjct: 238 GQPTSGEICKACMF 251
>gi|222445889|ref|ZP_03608404.1| hypothetical protein METSMIALI_01535 [Methanobrevibacter smithii
DSM 2375]
gi|222435454|gb|EEE42619.1| TIGR00269 family protein [Methanobrevibacter smithii DSM 2375]
Length = 305
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +K+ ++ + +C++CF E E+++ + + +L G+++ + SGGKDS
Sbjct: 3 CSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+L+ R+ N +D+ +++DEGI YR + + R+ + G+ K+VS K+ YG
Sbjct: 63 TTLEILNSF-RKMNV-IDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEI++ +C++CGVFRR +++ A + KIATGHN DD + +++N L G+
Sbjct: 121 ITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGN 180
Query: 196 IARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L++ ++ + + KP + E+EI Y K L+ C Y+ ++RG
Sbjct: 181 TDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGL-YVVAKELEVHFDSCPYAQQSFRGE 239
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTS---TKMPEQGTCERCGYISSQKWCKACVL 311
+ I L P ++ + + + K Q CERCG S+ + CKAC
Sbjct: 240 VSDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTF 299
Query: 312 LEGLNR 317
LE L +
Sbjct: 300 LEELGK 305
>gi|148642613|ref|YP_001273126.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
gi|261349566|ref|ZP_05974983.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148551630|gb|ABQ86758.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii ATCC 35061]
gi|288861524|gb|EFC93822.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 305
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +K+ ++ + +C++CF E E+++ + + +L G+++ + SGGKDS
Sbjct: 3 CSKCGNSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+L+ R+ N +D+ +++DEGI YR + + R+ + G+ K+VS K+ YG
Sbjct: 63 TTLEILNSF-RKMNI-IDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSLKEEYG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEI++ +C++CGVFRR +++ A + KIATGHN DD + +++N L G+
Sbjct: 121 ITLDEIMQKDNHIGSCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGN 180
Query: 196 IARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L++ ++ + + KP + E+EI Y K L+ C Y+ ++RG
Sbjct: 181 TDNLTKLGAKSSSKAKEFTVKIKPLREIPEREIGL-YVVAKELEVHFDSCPYAQQSFRGE 239
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTS---TKMPEQGTCERCGYISSQKWCKACVL 311
+ I L P ++ + + + K Q CERCG S+ + CKAC
Sbjct: 240 VSDLINKLSEKHPTIKYSALRGYDKIKEAIGDGFKKTYPQSRCERCGEPSANRLCKACTF 299
Query: 312 LEGLNR 317
LE L +
Sbjct: 300 LEELGK 305
>gi|452077464|gb|AGF93423.1| PP-loop domain-containing protein [uncultured organism]
Length = 319
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 158/305 (51%), Gaps = 10/305 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C +R +R + + C CF + E+ + + L + G+R+ G SGG DS
Sbjct: 4 CSFCGRRAVYYQRTAGVYR-CDRCFSKNIEKRFRRTVNKYDLLEPGDRVIAGVSGGSDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V +L++ + + +++ L+IDEGI GYRD+S+ VK N + G+ V +KD++G
Sbjct: 63 VNLKLLADYSDYRD--IEVVSLTIDEGIEGYRDESVPIVKENSKKLGVDHYFVRFKDVFG 120
Query: 136 WTMDEIVKV---IGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
++DE+ + + + CT CG+ RR L++ + L DK+A GHN DD +T++LN +
Sbjct: 121 KSLDELADISSEVDGPDPCTLCGILRRSLLNQASRELGGDKLAIGHNLDDEVQTIMLNYI 180
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
RGDI+RL R T ++G + R KP + EKEI Y K L C Y R
Sbjct: 181 RGDISRLKRLGPKTEAQEGFVQRIKPLREIMEKEIAI-YGMLKDLSIHIATCSYV-GGMR 238
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKACV 310
R+FI LE P I++ E + + + ++ E CE C ++ C+AC
Sbjct: 239 SEVRDFINKLEDNHPTTKFRILRMFEELKPNLPSESEDFELKRCEICDEPATGALCRACE 298
Query: 311 LLEGL 315
LL L
Sbjct: 299 LLNNL 303
>gi|116753888|ref|YP_843006.1| PP-loop domain-containing protein [Methanosaeta thermophila PT]
gi|116665339|gb|ABK14366.1| PP-loop domain protein [Methanosaeta thermophila PT]
Length = 326
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +R L +C E F E + +I + + ++F G R+A+ SGGKDS+
Sbjct: 4 CSRCGRPSVIHQRYSGL-NLCAEHFEEDVQRKIRETLRTYRIFSRGGRVAVALSGGKDSS 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL + L + H ++L L +DEGISGYR+D+LQ + +P +S+++ +G
Sbjct: 63 VLLYTLKRIFS-HRRDIELIALMVDEGISGYREDTLQNAAALADRLDVPHITLSFREEFG 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEI + + CT+CGV R+ L++ A L +ATGHN DD A+T+LLN LRGD
Sbjct: 122 ITIDEIAERDLHQAPCTYCGVMRKHLLNKRARELNAIALATGHNLDDEAQTILLNYLRGD 181
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ RL R L ++G + R KP + E+E+ C P A R
Sbjct: 182 VDRLFR-LLPKRPKEGLVYRIKPLRRIPEREVAIYAMIHGIFPRGHGSCPNVPRAMRLEV 240
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
+ + ++E P I++ + R + CERCG + CK C LLEG
Sbjct: 241 KNILNEIEARHPGTKYSILRGFDKIRELAPDIHVDLHRCERCGEPAGGSVCKTCQLLEGF 300
>gi|383320454|ref|YP_005381295.1| hypothetical protein Mtc_2037 [Methanocella conradii HZ254]
gi|379321824|gb|AFD00777.1| TIGR00269 family protein [Methanocella conradii HZ254]
Length = 304
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +R + +C E ++ + + ++ G+ +A+G SGGKDS
Sbjct: 3 CDKCGKEAVIYQRYSGM-HLCAAHEIADVERKVKKRMRQEKMVIPGDHVAVGMSGGKDSA 61
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+L+E +R + ++IDEGI GYR+ S+ VK + G+P +VS+KD
Sbjct: 62 ATLSILAETFGKRPE--IKFTAITIDEGIEGYRNFSIPKVKELCDRLGVPHVVVSFKDEV 119
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+D+++K + +CT+CGVFRR L++ A + +K+ATGHN DD A+TVLLN+L G
Sbjct: 120 GCTLDDMLKRERKEASCTYCGVFRRMLLNKKAREIGANKLATGHNLDDDAQTVLLNVLNG 179
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ RL+R + ++G +PR KP E+EI YA+ K+L ++ EC Y+ + RG
Sbjct: 180 DVERLARLR-PSRIQEGLVPRIKPLMDIPEREIAL-YAFLKKLPFYLGECPYAHESLRGE 237
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTK---MPEQGTCERCGYISSQKWCKACVL 311
++ + D E P I++ ++ K +P + CE CG S K C+ C L
Sbjct: 238 VKDMLNDFESRHPGTKYSIMRGFDSIVDCLKEKYRQVPLE-RCEICGEPSIDKTCQGCKL 296
>gi|73670143|ref|YP_306158.1| hypothetical protein Mbar_A2672 [Methanosarcina barkeri str.
Fusaro]
gi|72397305|gb|AAZ71578.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 155/301 (51%), Gaps = 10/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN ++ + +C++ F E E +I I + + IA+ SGGKDS+
Sbjct: 5 CKKCNHEAIIFQKYSGM-HLCKKHFVEDVERKIKLTIRKEYSIRKNDMIAVALSGGKDSS 63
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V +++ ++ NR +++ +S+DEGI+GYR SL+ K G+ I S+K++
Sbjct: 64 VALYIVHKILGNRP---DIEIVAISVDEGINGYRPHSLEVAKSLTKMLGVRHIIKSFKEV 120
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G TMDE+ + K C++CGV R+ L+R A + K+ TGHN DD A+T+LLN LR
Sbjct: 121 HGVTMDELAAMDREKGACSYCGVLRKNILNRTALEIGATKLVTGHNLDDEAQTILLNHLR 180
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ R+ R E G + R KP + EKE+ YA L +EC Y+ A RG
Sbjct: 181 GDVERMVRLAPPAAIE-GLVLRAKPLRNIPEKEVAL-YALVNSLPVDFSECPYAGEALRG 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ--GTCERCGYISSQKWCKACVL 311
RE + + E P +++ + + +MP G C CG ++ C+AC L
Sbjct: 239 EIRELLNNFEAKHPGTKYSLLRGFDKLTGVLTKEMPPAKIGKCRICGETCTEDVCQACKL 298
Query: 312 L 312
L
Sbjct: 299 L 299
>gi|15679734|ref|NP_276852.1| hypothetical protein MTH1742 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622874|gb|AAB86212.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 270
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 150/266 (56%), Gaps = 8/266 (3%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L + G+R+ +G SGGKDS ++ +L EL R+ ++L ++IDEGI GYR+D ++ +
Sbjct: 8 KLIERGDRVLVGLSGGKDSVMVIDILDELRERNI--IELEAVTIDEGIGGYREDGVRIAR 65
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+ G+P ++VS +D G T+DEI+K ++ CT+CGVFRR L+R A K KIA
Sbjct: 66 KICADRGIPHRVVSLEDYAGITLDEIMKNPS-RSACTYCGVFRRWILNREARKSKATKIA 124
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYF 234
TGHN DD + +++N L G++ L+R +T+ G IP+ KP + EKE+ Y
Sbjct: 125 TGHNLDDETQAIVMNYLEGNLENLTRIGPMTSSAGGRFIPKIKPLREIPEKEVAL-YVLA 183
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE---Q 291
+ LD C Y+ ++R +F+K + RP + ++ + + + E
Sbjct: 184 RGLDVHLAGCPYASGSFRREIGDFLKQISVKRPTIMYSTLRGFDRIKEILRRDLSESGRS 243
Query: 292 GTCERCGYISSQKWCKACVLLEGLNR 317
G C +CG +S K CKAC +E L +
Sbjct: 244 GICVKCGEPASGKLCKACTFIEELTK 269
>gi|325958250|ref|YP_004289716.1| hypothetical protein Metbo_0492 [Methanobacterium sp. AL-21]
gi|325329682|gb|ADZ08744.1| protein of unknown function UPF0021 [Methanobacterium sp. AL-21]
Length = 311
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 164/305 (53%), Gaps = 10/305 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +K+ ++ +++C +CF E ++++ + I L + G+++ +G SGGKDS
Sbjct: 4 CDKCGSPEIIIKKKQSGQKLCSKCFIESTKKKVLKDIRRQNLIEKGDKVLLGLSGGKDSV 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+L +LS L R +DL ++IDEGI GYR++ ++ +N +YG+ ++VS+K +G
Sbjct: 64 MLLDILSTLKNRGI--IDLVAVTIDEGIEGYREEGVELAIKNAEKYGVEHRVVSFKQYFG 121
Query: 136 WTMDEIVKVIGL---KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
T+D+I++ L +N CT+CGVFRR +R + + KIATGHN DD ++++++ L
Sbjct: 122 TTLDKIIQNNSLDVRRNACTYCGVFRRWIFNRVSKEVGATKIATGHNLDDETQSIVMSYL 181
Query: 193 RGDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
G+I L+R + + D + KP + EKEI Y K LD C Y+ ++
Sbjct: 182 EGNIQNLTRIGPKSQSKSDKFTVKIKPLREIPEKEIGL-YVIAKELDVHFAGCPYAGESF 240
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG---TCERCGYISSQKWCKA 308
R +K L P + ++ + + + + CE CG S+ + CKA
Sbjct: 241 RAEIGTILKQLTANHPTIMYSTLRGFDKIKPVLKKEFATESVFEVCEICGEPSASRLCKA 300
Query: 309 CVLLE 313
C L+
Sbjct: 301 CSFLK 305
>gi|336477052|ref|YP_004616193.1| PP-loop domain-containing protein [Methanosalsum zhilinae DSM 4017]
gi|335930433|gb|AEH60974.1| PP-loop domain protein [Methanosalsum zhilinae DSM 4017]
Length = 306
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 161/302 (53%), Gaps = 12/302 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ CNQR ++ + ++CR+ F E E +I I + IA+ SGGKDS+
Sbjct: 5 CTKCNQRSVIFQKYSGM-RLCRKHFIEDVERKIKLTIRKEANIAKNDTIAVALSGGKDSS 63
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VL +VL + L R + + + +++DEGI GYR ++Q+ G+ +VS++ +
Sbjct: 64 VLLYVLHKTLKERPD--IRIVAITVDEGIEGYRSHTVQSAAILAQNMGIEHIVVSFEQEF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G ++DE++ ++ CT+CGV R+ L+R A + K+ATGHN DD A+T+ LN +RG
Sbjct: 122 GKSLDELISGERVQGACTYCGVLRKSLLNRIARNIGATKLATGHNLDDEAQTIFLNHIRG 181
Query: 195 DIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ RL R L T E DG I R KP + EKE+ YA+ L +EC Y+ A RG
Sbjct: 182 DVERLVR--LAPTRELDGLILRSKPLRKIPEKEVAL-YAFLNDLPVDYSECPYAGEAMRG 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACV 310
R+ + DLE P I+ SG + + K Q C+ CG + C+AC
Sbjct: 239 EVRDVLNDLEVNHPGTKYSIL-SGFDKMVQILAKEYTQTNMSGCQICGEPCNSNTCQACK 297
Query: 311 LL 312
+L
Sbjct: 298 IL 299
>gi|448734857|ref|ZP_21717077.1| PP-loop domain-containing protein [Halococcus salifodinae DSM 8989]
gi|445799487|gb|EMA49866.1| PP-loop domain-containing protein [Halococcus salifodinae DSM 8989]
Length = 320
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 160/322 (49%), Gaps = 27/322 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C+ R+A L + +C E+ + + I + L + E +G S
Sbjct: 3 CTKCD-REAVLHAAYSGAHLCEHHLRASVEKRVRRRIREDGLIGDDATPQDPETWLLGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L+E + ++L L+I EGI GYRD+SL +G+P ++V+
Sbjct: 62 GGKDSVVLGSILTE-TFADDPRIELVALTIHEGIEGYRDESLDAASAFADDHGIPHEVVT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y D + MD +V K C +CGVFRR+ L A DK+ TGHN DD A+T +
Sbjct: 121 YADEFDLEMDRVVEKDPENMAACAYCGVFRRELLAEYADAYGADKLLTGHNLDDEAQTAM 180
Query: 189 LNILRGDIARLSRCTLITTGEDGP----------IPRCKPFKYTYEKEIMFTYAYFKRLD 238
+N+L GD+A++++ + GP +PR KP + EKE+ YA+ L
Sbjct: 181 MNVLEGDVAQMAKHFDASL---GPFPERTNTTEFVPRAKPLRDVPEKEVAL-YAHLADLP 236
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM----PEQGTC 294
EC +S AYRG ++ + DLE P I+ E F + P+ G C
Sbjct: 237 VHMAECPHSSEAYRGEIQQLLFDLEENHPGTRHSIMAGYEEFAKLAAEAYRGDGPDLGEC 296
Query: 295 ERCGYISSQKWCKACVLLEGLN 316
ERCG ++++ C++C L E ++
Sbjct: 297 ERCGGTTTREICRSCQLTEAVH 318
>gi|282164695|ref|YP_003357080.1| hypothetical protein MCP_2025 [Methanocella paludicola SANAE]
gi|282157009|dbj|BAI62097.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 310
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 8/301 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + L++ + +C E E +I + + +++ G+ +A+ SGGKDS
Sbjct: 3 CDKCGKEAVVLQKYSGM-HLCAHHEIEDVERKIKKRMRQDRMVVPGDHVAVAMSGGKDSA 61
Query: 76 V-LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V L+ + + R + + ++IDEGI GYR+ S+ VK + G+P +VS+++
Sbjct: 62 VTLSILFETFSMRPD--IKFTAITIDEGIDGYRNFSIPRVKELCDKLGVPHIVVSFQEEV 119
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DE++ + +CT+CGVFRR L+ A + +K+ATGHN DD A+TVLLN++ G
Sbjct: 120 GCTLDEMLTHERKEASCTYCGVFRRTLLNTTARNIGANKLATGHNLDDDAQTVLLNVMNG 179
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RL+R + ++G IPR KP E+E+ YA+ K L + EC Y+ + RG
Sbjct: 180 DTERLARLR-PSRPQEGLIPRIKPLMDVPEREVAL-YAFLKGLPFHMGECPYARESLRGE 237
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACVLL 312
++ + D E P I++ +N K P+ CE CG + C+ C L
Sbjct: 238 IKDMLNDFESRHPGTKYSIMRGFDNMVPCLKEKYPQVPLTKCEICGEPGIKGVCQGCKLK 297
Query: 313 E 313
E
Sbjct: 298 E 298
>gi|84489152|ref|YP_447384.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|84372471|gb|ABC56741.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 319
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 164/313 (52%), Gaps = 16/313 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ C + + R +++C +CF + E+++ + I +L G+++ +G SGGKDS
Sbjct: 5 ICTQCGSKHVVIHRKYNGQKLCSKCFRKSIEKQVLRTIKKEKLVTKGDKVLVGLSGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L+ L ++ L+ ++IDEGISGYR++ ++ K + IVS+KD Y
Sbjct: 65 VALLKILNILKEKNIITLEA--VTIDEGISGYREEGIRIAKETAKALDIKHHIVSFKDKY 122
Query: 135 GWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+T+D+I++ N+ CT+CGVFRRQ ++ A + K+ATGHN DD +++++N
Sbjct: 123 NFTIDKIMEAEAKCNDAQHACTYCGVFRRQIFNQVARDVNATKLATGHNLDDETQSIVMN 182
Query: 191 ILRGDIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
L G++ + R T +D + KP + EKEI Y + C Y+
Sbjct: 183 YLEGNVNNMVRIGYKTLSQDKRFTQKIKPLRKIPEKEIGL-YVLESGFEVHFDGCPYAHE 241
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFR-------ISTSTKMPEQGTCERCGYISS 302
++R +FI++ P + I+ E + ++ T P GTC++CG +S
Sbjct: 242 SFRMEIGDFIRETTLKHPTIMYSILNGFEKIKPAIKKEYMANHTGKP-NGTCKKCGEPAS 300
Query: 303 QKWCKACVLLEGL 315
Q CK+C LE +
Sbjct: 301 QDICKSCKFLEKI 313
>gi|296109212|ref|YP_003616161.1| PP-loop domain protein [methanocaldococcus infernus ME]
gi|295434026|gb|ADG13197.1| PP-loop domain protein [Methanocaldococcus infernus ME]
Length = 296
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 154/281 (54%), Gaps = 16/281 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C CF E E + +V+ K G +I IG SGGKDS V+A +L++L+ + L
Sbjct: 20 LCENCFKEEVERRVKKVV--KPYMKRGVKINIGISGGKDSLVMAHILNKLSYPE---VKL 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ I EGI G+RD +L+ VK+ + GL LK++ K+ + +T+DE++ ++ C+ C
Sbjct: 75 RCIFIHEGIEGFRDKALRVVKKFCEKEGLELKVIYLKEEFNYTLDEMITLLKEYKPCSIC 134
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED--GP 212
VFRR L++ + D +A GHN DD A+T+L+N + G+I +I G+D G
Sbjct: 135 AVFRRYLLNKYSK--DSDYLAIGHNLDDHAQTILMNYIEGNIK-----NIIYFGKDAEGF 187
Query: 213 IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILD 272
+ R KP KY E+E+ F YA +L+Y C YS +YR +E IK LE+++P
Sbjct: 188 VKRIKPLKYVPEEEVKF-YADLVKLEYQKEPCPYSSLSYRHKMKEIIKLLEKMKPGVRFS 246
Query: 273 IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
I++ E I + C++C Y S + CK C LE
Sbjct: 247 IVRGYEKL-IKLINYEEKINRCKKCNYPCSGELCKVCQYLE 286
>gi|407463919|ref|YP_006774801.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
gi|407047107|gb|AFS81859.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
Length = 304
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A R + E++C +CF + + + I + K E +A+ SGGKDS
Sbjct: 3 CDRC-ENPPAYTRKYSGEKLCSQCFSKSIVRKTAKTISKYNMIKHNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL +++E+ HN+ + ++IDEGI GYRD++L+ V++ + + KI SYKDL+
Sbjct: 62 VLLKIINEMALTHNFRI--IAITIDEGIPGYRDEALEIVEKFCTELNVEHKIYSYKDLFE 119
Query: 136 WTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
T+DE + L+ N C+ CG RR+A+D A + D IATGHN DD +T ++N
Sbjct: 120 LTLDE---ALDLRENEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVIN 176
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+L GD ++ T+ D + + KPF YE EI+F YA+ + + S C +
Sbjct: 177 MLSGDTTKVGWMDPDTSEND--LRKIKPFCEIYESEIVF-YAFTNDMPFQSEPCPHMHEG 233
Query: 251 YRGFAREFIKDLER----LRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
R REF+ LE ++ I+K + + S S E+ CE+CG + C
Sbjct: 234 IRTEIREFLNSLENQHNGIKNNFYQSILKISQTVKNSNS---KEKMKCEKCGNDCTGNVC 290
Query: 307 KACVLL 312
C ++
Sbjct: 291 SVCSVV 296
>gi|48477224|ref|YP_022930.1| ATPase of the PP-loop superamily [Picrophilus torridus DSM 9790]
gi|48429872|gb|AAT42737.1| ATPases of the PP-loop superamily [Picrophilus torridus DSM 9790]
Length = 312
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 164/314 (52%), Gaps = 9/314 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE-RIAIGASGGKDS 74
C+ CN+ KA +CRE F FE+ + + I K + I++ SGGKDS
Sbjct: 3 CTFCNE-KAVYNVKYNGTALCREHFINFFEKRVKREIRNQTDLKRDKITISVAISGGKDS 61
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V +VL++ L+ R N + F ++DEGISGYR ++ R G+ +I+S+K
Sbjct: 62 LVTLYVLNKILSDRRNLKIKAF--TVDEGISGYRPSGIEKAARLCKSLGIDHEIISFKHE 119
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G+T+DEI+ + + +C+ CG RR +++ + K D +A G N DD A+++L+N++R
Sbjct: 120 FGYTLDEIMSIDNTRISCSHCGPMRRSLMNKISMYNKADYLALGINLDDYAQSILMNVVR 179
Query: 194 GDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GDI+R R T E DG IPR P + EKE++ YA +DY ++ C Y +AYR
Sbjct: 180 GDISRYIRLAPHTGIERDGLIPRIIPLRKIPEKEVVI-YAILNNIDYDNSWCPYYRDAYR 238
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKACV 310
AR I LE P I+K + R + S + + C CG S C+ C
Sbjct: 239 NEARMIINMLEEKTPGTRQAIVKFFDGTRDILKNSYESKDMKRCMICGSPSQNDVCEVCS 298
Query: 311 LLEGLNRGLPKMGI 324
L+ +N + K I
Sbjct: 299 DLKEINERVLKKSI 312
>gi|20094539|ref|NP_614386.1| ATPase [Methanopyrus kandleri AV19]
gi|19887658|gb|AAM02316.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Methanopyrus kandleri AV19]
Length = 303
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +R A +RP + +C C E+ + + + I + F+ G+RI + SGGKDS+
Sbjct: 3 CTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKDSS 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ +++E +++ L++DEGISG+RD L+ +R + + ++VS+++ YG
Sbjct: 63 LALRLVTEYVEPLPE-VEVIALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEYG 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++E+V+ + + + CT CGV RR+ L+R A L D + TGHN DD A+ L+N ++ D
Sbjct: 122 FALEEVVEDVDV-SACTLCGVLRRRLLNRRARELGADVVVTGHNLDDEAQAALMNFVKAD 180
Query: 196 IARLSRCTLITTGEDGPI-PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+A+L+R ED I PR KP + E+E+ + L + + C Y+ + R F
Sbjct: 181 LAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELG-LPFHADPCPYARFSVRSF 239
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVLL 312
RE + ++E P ++++ + + E+G CERCG ++ K CKAC LL
Sbjct: 240 FREILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELL 299
Query: 313 EGLN 316
E L
Sbjct: 300 ERLG 303
>gi|70946522|ref|XP_742967.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522234|emb|CAH80335.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 142
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 98/141 (69%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC CN+ + RP E++C+ CF E FE+E+H I+ ++F+ ++I I SGGKDS
Sbjct: 2 LCEQCNKNNVCMLRPSNKEKLCKYCFLESFEDEVHTTILKKKMFEDNDKICIAVSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+VL VL + +++NY +LFLL+IDEGI GYRDDSL+ V + E Y LPL ++ ++D++
Sbjct: 62 SVLTHVLVNIKKKYNYNWNLFLLAIDEGIKGYRDDSLKVVYKLEKLYNLPLSVLKFQDIF 121
Query: 135 GWTMDEIVKVIGLKNNCTFCG 155
+TMD++V IG KNNCT CG
Sbjct: 122 SYTMDDVVSYIGKKNNCTVCG 142
>gi|432330227|ref|YP_007248370.1| TIGR00269 family protein [Methanoregula formicicum SMSP]
gi|432136936|gb|AGB01863.1| TIGR00269 family protein [Methanoregula formicicum SMSP]
Length = 310
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 15/302 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C TC + A + +T +CR+ F E + + I L G+ +AI SGGKDST
Sbjct: 13 CDTCGE-PAVYRERRTGRHLCRDHFIADVEGRVLETICSRNLIAPGDHVAIALSGGKDST 71
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +LS + + L ++IDEGI+GYR+D++++ ++ +P VS+ +L+G
Sbjct: 72 ALLMILSRVLPSLGT-IRLSAITIDEGIAGYREDTVRSADMLVARFSIPHLTVSFPELFG 130
Query: 136 WTMDEIVKVIGLKNN-CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
T+D + G + C+ CG+ RR+AL+ A K+ATGHN DD A++V +N+LRG
Sbjct: 131 GTLDTFLA--GREPEACSVCGILRRKALNVAAERAGATKLATGHNLDDEAQSVFMNVLRG 188
Query: 195 DIARLSRCTLITTGEDGP---IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
D+ RL R +G D IPR KP + EKEI Y + EC Y+ +A
Sbjct: 189 DLPRLVR----DSGSDSQGRFIPRIKPLMFISEKEIA-VYLMLHGMWADLPECPYAVHAL 243
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKAC 309
RG R + E P +L+++KS + ++ C CG S + C+ C
Sbjct: 244 RGEVRRMLATFESKHPGTMLNLMKSKAKIEARCGGLLMKETVHHCRECGDPCSGEICQLC 303
Query: 310 VL 311
L
Sbjct: 304 KL 305
>gi|298674631|ref|YP_003726381.1| PP-loop domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298287619|gb|ADI73585.1| PP-loop domain protein [Methanohalobium evestigatum Z-7303]
Length = 314
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 16/308 (5%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR C+ C+ ++ + +C++ F E E +I I + E IAI SGGK
Sbjct: 12 GRQCTKCDNESIIYQKYSGM-HLCKKHFVEDVERKIKLTIRKHYNINRNETIAIALSGGK 70
Query: 73 DSTVLAFVLSELNRRHNYG----LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
DSTVL ++L+++ +G ++L ++IDEGISGYR D++Q K G+ I
Sbjct: 71 DSTVLLYILNKI-----FGDRPDINLVAITIDEGISGYRLDTIQKSKELTDNLGIKHVIR 125
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
S+ D YG T+DE+ + C++CGVFR++ L++ A ++A GHN DD A+T+L
Sbjct: 126 SFADEYGMTLDELTQKQRSYGACSYCGVFRKKLLNKTAKEEGATRLAIGHNLDDEAQTIL 185
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
LN L+GDI+RL R E G R KP + EKE+ YA L +EC Y+
Sbjct: 186 LNHLKGDISRLVRLDPPKKIE-GLTLRIKPLRSIPEKEVAL-YAIVNELPMDFSECPYAH 243
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ----GTCERCGYISSQK 304
A RG R+ + + E P ++ + + + P + C CG + +
Sbjct: 244 EAIRGEVRDMLNEFESKHPGTKHSLLSGFQKLLPILAKEYPPEENKLNECSVCGDLCTGS 303
Query: 305 WCKACVLL 312
C+AC LL
Sbjct: 304 LCQACKLL 311
>gi|20090822|ref|NP_616897.1| hypothetical protein MA1974 [Methanosarcina acetivorans C2A]
gi|19915889|gb|AAM05377.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 302
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 152/301 (50%), Gaps = 10/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN ++ + +C+ F E E +I + + K + IA+ SGGKDS+
Sbjct: 5 CKKCNHEAIIFQKYSGM-HLCKRHFIEDVERKIKLTVRKDYSIKKNDVIAVALSGGKDSS 63
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V +V+ ++ NR + + +SIDEGI GYR SL+ K+ G+ I S+KD
Sbjct: 64 VALYVMHKILGNRP---DIQIVAVSIDEGIHGYRPHSLELAKKLTETLGVRHIIKSFKDE 120
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G TMDE+ + K C++CGV R+ L+R A + K+ TGHN DD A+T+LLN R
Sbjct: 121 HGVTMDELAAMDREKGTCSYCGVLRKSILNRVALEIGATKLVTGHNLDDEAQTILLNHFR 180
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ R+ R E G + R KP + EKE+ YA L +EC Y+ A RG
Sbjct: 181 GDMERMVRLAPPAAVE-GLVLRAKPLRNIPEKEVAL-YALINSLPVDFSECPYAGEALRG 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVL 311
RE + + E P +++ + + + ++P C CG ++ C+AC L
Sbjct: 239 EIRELLNNFETGHPGTKYSLLRGFDKLVGALAKELPPAKIEKCRICGDTCTEDICQACKL 298
Query: 312 L 312
L
Sbjct: 299 L 299
>gi|336121482|ref|YP_004576257.1| hypothetical protein Metok_0497 [Methanothermococcus okinawensis
IH1]
gi|334856003|gb|AEH06479.1| protein of unknown function UPF0021 [Methanothermococcus
okinawensis IH1]
Length = 306
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 17/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + + + + C+ECF + ++++ + + G + K I +G SGGKDS
Sbjct: 3 CSICKKNISFYHQRHSGLNFCKECFVKYIKKKVRKTL-GKNIIKQNMTIGMGLSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+A++L+E + ++ L +DEGI G+R D + + +Y + KI ++K+ G
Sbjct: 62 VMAYILNEFYKPIPNS-NIIALIVDEGIEGFRKDGVNMAIKFCEEYDIAYKIATFKEYIG 120
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+ +DE+VK+ KN C+FCGV RR+ L++ A K + +A GHN DD+A+ +++N
Sbjct: 121 YDLDELVKIAKDKNLTMNPCSFCGVIRRKILNKMALNEKCNYLAIGHNLDDMAQAIMMNY 180
Query: 192 LRGDIARLSRCTLITTGEDGPIP----RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+ GD+ +L+ G D P R KP KY E E++ +A + Y C YS
Sbjct: 181 IEGDVKKLA-----ILGHDANNPMFVKRIKPLKYIPENEVLL-FADLLEIKYHKAPCPYS 234
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
+YR + I LE P I+ E + E C+ C S+ + CK
Sbjct: 235 SMSYRAEISDIIDKLEENHPGTKYSIVSGFEKLLEYLPVE-KEMNVCKYCNEPSASEICK 293
Query: 308 ACVLLEGL 315
C+ LE L
Sbjct: 294 VCMFLEKL 301
>gi|296242202|ref|YP_003649689.1| PP-loop domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094786|gb|ADG90737.1| PP-loop domain protein [Thermosphaera aggregans DSM 11486]
Length = 339
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 156/309 (50%), Gaps = 20/309 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C +RKA C+ F FE + + I +++ E I +G SGGKDS
Sbjct: 4 CSFC-ERKAVYVNHLNGRAYCKLHFTSYFERRVRRTIRKHRMLGEKEHIVVGVSGGKDSM 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK----RNEIQYGLPLKIVSYK 131
L +L +L+R+ N L L +DEGI GYR++++ +K RN ++Y KIVS+K
Sbjct: 63 SLLHILRKLSRK-NKNWRLTALLVDEGIKGYRENTIPALKIYAERNMVEY----KIVSFK 117
Query: 132 DLYGWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
D G T+DEIV K C++CGVFRR L++ A L +AT HN DDI +T
Sbjct: 118 DYLGLTLDEIVSTGREKGLPYLPCSYCGVFRRYVLNKAARELGGTVLATAHNLDDIVQTY 177
Query: 188 LLNILRGDIARLSRCTLITT--GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
L+N++ +++R + G +G +PR KPF EKE ++ +C
Sbjct: 178 LMNVINNSWDKIARLKPVADKGGHEGFVPRIKPFYEVLEKESAIYALVNGLVEPGYHQCP 237
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQ--GTCERCGYIS 301
Y+ R R+ + DLE P +++S E I + K P + GTC+ CG S
Sbjct: 238 YAEYNIRFTIRKILNDLEEKYPGTKYGLLRSLEKIISLIENAQKTPVKPFGTCKICGEPS 297
Query: 302 SQKWCKACV 310
S CKAC+
Sbjct: 298 SHPICKACM 306
>gi|307354722|ref|YP_003895773.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
gi|307157955|gb|ADN37335.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
Length = 295
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C A L + + +C F FE + I + G+RIA+ SGGKDS+
Sbjct: 3 CSKCGS-DAVLFQDYSGMHLCESHFTADFEGRAKKAIRKYRWISQGDRIAVAMSGGKDSS 61
Query: 76 -VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+L F+ R + + +F +SIDEGI GYRD ++ V++ +YG+ VS+KD Y
Sbjct: 62 ALLHFLAKTFGERRD--ITIFAISIDEGICGYRD--MKPVEKIAERYGVSFHSVSFKDAY 117
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+T+DEIV G + +C+ CGV RR L++ A L KIA G N DD A++VL+N LRG
Sbjct: 118 GFTLDEIVAKQGDRISCSRCGVLRRHLLNKTARELGATKIALGFNLDDEAQSVLMNALRG 177
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D L R +G IPR +PF + E+E+ YA + C YS A R
Sbjct: 178 DAETLVR---RQVPREGFIPRIRPFIHLPEREVAL-YALLNVEGFIEAGCPYSKKALRAD 233
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
RE + P A ++ GE + + E C CG + C+AC ++
Sbjct: 234 VREILNIYNYRHPAAKYALVNLGEGLKGNEGDNKTEPSICPECGEPVFGE-CQACRIVME 292
Query: 315 LNR 317
+ R
Sbjct: 293 MKR 295
>gi|448467885|ref|ZP_21599665.1| PP-loop domain protein [Halorubrum kocurii JCM 14978]
gi|445811515|gb|EMA61521.1| PP-loop domain protein [Halorubrum kocurii JCM 14978]
Length = 324
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 139/270 (51%), Gaps = 18/270 (6%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD+SL
Sbjct: 55 RWVIGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDESLDACVELAADLS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
L ++VSY+D + MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 LRHEVVSYEDEFDVRMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLIT-------TGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFRISTST 286
+ L EC +S AYRG + I DLE P A I+ + E +R
Sbjct: 233 RDLPTHMAECPHSSEAYRGEIQSTIHDLEENHPGARHSIMAGYEELSALAAEAYREGGDA 292
Query: 287 KMPEQGTCERCGYISSQKWCKACVLLEGLN 316
P+ G CERCG +S+ C+ C LL+ +
Sbjct: 293 DSPDLGECERCGSKTSRDVCRKCRLLDSIE 322
>gi|268323619|emb|CBH37207.1| conserved hypothetical protein, PP-loop family [uncultured
archaeon]
Length = 302
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 14/289 (4%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLD 93
+C F E ++ + + + + G+RIA+ SGGKDS+ L ++L E L+
Sbjct: 22 HLCEPHFIADVERKVKKAMRKQLMIEYGDRIAVALSGGKDSSALLYMLKEKIFHDRNDLE 81
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTF 153
F +++DEGI G+R +L+ +R + + I S+ +G+T+DEIV + CTF
Sbjct: 82 FFAIAVDEGIKGFRSATLRNAERVAKELEIDCFIYSFAHEFGFTLDEIVAKGFDQAPCTF 141
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPI 213
CGV RR+ LD A + K+ T HN DD +T+L+N LRGDI RL R + +
Sbjct: 142 CGVLRRRILDVKAKEMGATKVVTAHNLDDEVQTILINYLRGDIERLGR---LQGRRAEFV 198
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDI 273
PR KP + YEKE YA + + C Y+ ++R + + +LER P +
Sbjct: 199 PRVKPLRDVYEKEAAL-YALVAGIPIHTIHCPYASLSFRSTVKSMLNELERKHPGTKYSL 257
Query: 274 IKSGENFRISTSTKMPEQGT------CERCGYISSQKWCKACVLLEGLN 316
++ E S +P T CE CG S+ + CK C ++ +N
Sbjct: 258 LRGYER----VSEFLPAVQTERKLLRCELCGEASASRICKTCEIIGMMN 302
>gi|150398925|ref|YP_001322692.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
gi|150399417|ref|YP_001323184.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
gi|150011628|gb|ABR54080.1| PP-loop domain protein [Methanococcus vannielii SB]
gi|150012120|gb|ABR54572.1| PP-loop domain protein [Methanococcus vannielii SB]
Length = 308
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 19/292 (6%)
Query: 33 EQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGL 92
+ C+ECF +++ + + G + K +I IG SGGKDS V+A +LSE +
Sbjct: 19 KHFCKECFINDITKKVRKTL-GRNIIKNNVKIGIGLSGGKDSLVMAHLLSEFFKPIP-NA 76
Query: 93 DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN--- 149
L L +DEGI G+R D + +Y + K+V +KD +D IVK+ KN
Sbjct: 77 KLIGLMVDEGIDGFRTDGINNAIDFCNEYDIEYKVVHFKDYIETDLDTIVKLAKEKNLTM 136
Query: 150 -NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
C+FCGV RR+ L++ A + K D +A GHN DDI++ V++N + G+I +L+ G
Sbjct: 137 NPCSFCGVIRRKILNKIAIIEKCDYLAIGHNLDDISQAVMMNYIEGNIKKLA-----VLG 191
Query: 209 EDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
+D + R KP + E E++ +A F +L Y C YS +YR E LE
Sbjct: 192 KDSKNSKFVKRIKPLEKIPEDEVLL-FADFLKLKYHKAPCPYSSLSYRSEISEITDQLEE 250
Query: 265 LRPRAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACVLLEGL 315
P A I+K E R+ +PE+ G C+ CG SS+ CK C L+ L
Sbjct: 251 NHPGAKYSIVKGFE--RLLEYLNVPEEVGVCKICGDASSRDICKVCTYLKEL 300
>gi|410669608|ref|YP_006921979.1| hypothetical protein Mpsy_0400 [Methanolobus psychrophilus R15]
gi|409168736|gb|AFV22611.1| hypothetical protein Mpsy_0400 [Methanolobus psychrophilus R15]
Length = 321
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN R A + + + +CR+ F E E +I I + K E IA+G SGGKDS+
Sbjct: 23 CDKCN-RDAIIFQKYSGMHLCRKHFIEDVERKIKLTIRKHYSIKRNETIAVGLSGGKDSS 81
Query: 76 VLAFVLSELNRRHNYG----LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
++L ++ +G + L + IDEGI GYR +++ + K Q G+ L + S+K
Sbjct: 82 TTLYILHKI-----FGGRPDIRLVGICIDEGIEGYRPNTIASAKELTSQLGIELIVRSFK 136
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+ YG TMD I K C++CGV R+ L++ A L ++A GHN DD A+T+LLN
Sbjct: 137 EEYGTTMDLIAPQKREKGTCSYCGVLRKSLLNKTALELGATRLAIGHNLDDEAQTILLNH 196
Query: 192 LRGDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
L+GD++R+ R L E +G + R KP + EKE+ YAY L C Y+ A
Sbjct: 197 LKGDVSRMVR--LAPPKELEGLVLRMKPLRQIPEKEVAL-YAYLHDLPLGFGGCPYAHEA 253
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKA 308
RG R + DLE P ++ + + P++G C C ++ C+A
Sbjct: 254 MRGEIRVLLNDLEVNHPGTKYALLSGFDKMSGILGREFPQEGLSKCRICSQACTEDVCQA 313
Query: 309 CVLL 312
C LL
Sbjct: 314 CKLL 317
>gi|300711905|ref|YP_003737719.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
gi|448295595|ref|ZP_21485659.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
gi|299125588|gb|ADJ15927.1| PP-loop domain protein [Halalkalicoccus jeotgali B3]
gi|445583694|gb|ELY38023.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
Length = 333
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 34/331 (10%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+ R+A + + +C F E + + + I + L E IG S
Sbjct: 3 CTKCD-REAVMHAAYSGAHLCETHFCESVDRRVRKRIREDSLLSDAATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL VL E + + +++ L+I EGI GYRD SL + G+ ++VS
Sbjct: 62 GGKDSVVLTHVLHETFAQ-DPRVEIVGLTIHEGIEGYRDKSLDACVELADEIGIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L R A L DK+ TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDDVVEDDPENMAACAYCGVFRRDVLSRYAERLDADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG--------------------EDGPIPRCKPFKYTYEKEIM 228
+N L GD+A++++ + G D +PR KP + EKE+
Sbjct: 181 MNFLEGDVAQIAKHFDASLGGFGDETGGSNGRNNDGTRAESDEFVPRAKPLRDVPEKEVA 240
Query: 229 FTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM 288
YA+ K L TEC +S AYRG + + DLE P I+ E S +
Sbjct: 241 L-YAHLKDLPAHITECPHSSEAYRGEIQRLLYDLEENHPGTRHSIMAGYEELGEIVSHEY 299
Query: 289 PEQGT----CERCGYISSQKWCKACVLLEGL 315
++ C+RCG ++++ C+ C LL +
Sbjct: 300 DDRSADLRECDRCGSATTREICRKCSLLSAI 330
>gi|329766712|ref|ZP_08258255.1| PP-loop domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136967|gb|EGG41260.1| PP-loop domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 304
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +AA R + E++C CF + + I + + E +A+ SGGKDS
Sbjct: 3 CDRC-ENQAAYTRKYSGEKLCSNCFSNSILRKTAKTISKYNMIQNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L V++++ HN+ + ++IDEGI GYR+++L+ V+ + + K+ SYK+L+
Sbjct: 62 ALLNVINQMKSTHNFRIKA--ITIDEGIPGYRNEALEIVQEFCAKLNVEHKVFSYKELFD 119
Query: 136 WTMDEIVKVIGLK--NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+DE + + G + ++C+ CG RR+A+D A+ + D IATGHN DD +T ++N+L
Sbjct: 120 LTLDEALNLRGNEKTSSCSICGTLRRRAIDHAANDIGADVIATGHNLDDTLQTFVINMLS 179
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD ++ T+ D + + KPF YE EI+F YA+ + + + C + R
Sbjct: 180 GDTNKIGWMDPDTS--DNTLRKIKPFCEIYESEIVF-YAFTNNIPFQTEPCPHMNEGIRT 236
Query: 254 FAREFIKDLE----RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
REF+ LE ++ IIK + I T ++ C +CG + K C C
Sbjct: 237 EIREFLNSLEGKHSGIKNNLYQSIIKVSQ---IVKDTNYKQKSICVKCGNECTGKICSVC 293
Query: 310 VLL 312
L+
Sbjct: 294 NLV 296
>gi|386001198|ref|YP_005919497.1| PP-loop domain-containing protein [Methanosaeta harundinacea 6Ac]
gi|357209254|gb|AET63874.1| PP-loop domain protein [Methanosaeta harundinacea 6Ac]
Length = 305
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 146/301 (48%), Gaps = 6/301 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R A +R L +C F E ++ +V+ ++F RIA+ SGGKDS+
Sbjct: 4 CDRCSGRAAIFQRYSGL-HLCPRHFEEDVHRKVKEVLRTYRIFGRPCRIAVAVSGGKDSS 62
Query: 76 VLAFVLSEL-NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L L + R + ++L +SIDEGI+GYR +L G+ + S + +
Sbjct: 63 SLLSILHALFSSRED--VELVAVSIDEGIAGYRPRTLAAAASVAKGLGVEHVVRSLEGEF 120
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T D + + C+FCGV R+ L+R A L D +ATGHN DD A+TV+LN L+G
Sbjct: 121 GVTTDLLASSGQPQGPCSFCGVLRKGLLNRTARELSADAVATGHNLDDEAQTVMLNYLKG 180
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ RL R G +PR KP + EKE M YA + + + C Y A R
Sbjct: 181 DVDRLYRLR-PRRALPGMVPRIKPLRRVPEKE-MGVYAIAHAIPFETLACPYLSRAMRQE 238
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
+E + DLE P I++ E E C RCG SS C C LLE
Sbjct: 239 VKELLNDLEAKHPGTKYSIVRGFEKILARDPPGSYEVVACTRCGEPSSDGVCATCRLLER 298
Query: 315 L 315
L
Sbjct: 299 L 299
>gi|45358919|ref|NP_988476.1| PP-loop domain-containing protein [Methanococcus maripaludis S2]
gi|45047785|emb|CAF30912.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 314
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 157/287 (54%), Gaps = 15/287 (5%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C+ECF + + ++ + + G + K ++A+G SGGKDS V+A++L+E ++ +L
Sbjct: 25 CKECFIKETKRKVRKTL-GRDVLKNNIKVAMGLSGGKDSLVMAYLLNEYYKQIPNS-NLI 82
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN----NC 151
+ ++EGI GYR D + + +YG+ KIV +KD G +DEIVK+ KN C
Sbjct: 83 AIMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPC 142
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+FCGV RR+ L+R + K D +A GHN DD+A+ V++N + GD+ +L+ +
Sbjct: 143 SFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGDVKKLA---FLGKSLKH 199
Query: 212 P--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
P + R KP + E E++ A L Y + C YS ++R + +LE+ P +
Sbjct: 200 PKFVKRIKPLEKIPEDEVLLL-AEMLELKYHKSPCPYSCLSFRSEVSDITDNLEKNHPGS 258
Query: 270 ILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKACVLLEGL 315
I++ E R+ ++P G C+ CG +S+ + CK C L+ L
Sbjct: 259 KYSIVRGYE--RLLEHIELPGYTGECKICGDLSATEVCKVCSYLKNL 303
>gi|355572133|ref|ZP_09043315.1| protein of unknown function UPF0021 [Methanolinea tarda NOBI-1]
gi|354824849|gb|EHF09088.1| protein of unknown function UPF0021 [Methanolinea tarda NOBI-1]
Length = 308
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 149/303 (49%), Gaps = 9/303 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +R L +CRE F+ FE + + I N+ G+ IA+ SGGKDS
Sbjct: 14 CDKCRRPAVLFQRYSGL-HLCREHFFADFEAKAKRTIRENRWVSRGDTIAVAFSGGKDSG 72
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L F L L R + L +++DEGI GYRD S + E+ +P VS++ YG
Sbjct: 73 ALLFFLHSLLSRRK-DVSLVAITVDEGIPGYRDPSRAGARARELD--IPHMTVSFRKAYG 129
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+DEIV+ G +CT+CGV RR L+ A K+A G N DD A+TVL+N+LRGD
Sbjct: 130 ITVDEIVERKGGALSCTYCGVLRRHLLNAAARDAGATKLAFGFNLDDEAQTVLMNVLRGD 189
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
ARL R G +PR KPF E+E+ Y++ + + C YS NA R
Sbjct: 190 TARLLRGAHPVPGM---VPRIKPFLSIPEREVAL-YSFLRCGTVDTGRCPYSENAMRAEV 245
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
R+ + P A ++ G + + E C RCG C++C +L+ +
Sbjct: 246 RQMLNAYAWNHPSARFALVNLGRELAELGAGRTGELQVCSRCGEPCGTT-CRSCGILDEV 304
Query: 316 NRG 318
G
Sbjct: 305 RHG 307
>gi|340624666|ref|YP_004743119.1| PP-loop domain-containing protein [Methanococcus maripaludis X1]
gi|339904934|gb|AEK20376.1| PP-loop domain-containing protein [Methanococcus maripaludis X1]
Length = 311
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 157/287 (54%), Gaps = 15/287 (5%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C+ECF + + ++ + + G + K ++A+G SGGKDS V+A++L+E ++ +L
Sbjct: 22 CKECFIKETKRKVRKTL-GRDVLKNNIKVAMGLSGGKDSLVMAYLLNEYYKQIPNS-NLI 79
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN----NC 151
+ ++EGI GYR D + + +YG+ KIV +KD G +DEIVK+ KN C
Sbjct: 80 AIMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPC 139
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+FCGV RR+ L+R + K D +A GHN DD+A+ V++N + GD+ +L+ +
Sbjct: 140 SFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGDVKKLA---FLGKSLKH 196
Query: 212 P--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
P + R KP + E E++ A L Y + C YS ++R + +LE+ P +
Sbjct: 197 PKFVKRIKPLEKIPEDEVLLL-AEMLELKYHKSPCPYSCLSFRSEVSDITDNLEKNHPGS 255
Query: 270 ILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKACVLLEGL 315
I++ E R+ ++P G C+ CG +S+ + CK C L+ L
Sbjct: 256 KYSIVRGYE--RLLEHIELPGYTGECKICGDLSATEVCKVCGYLKNL 300
>gi|126178433|ref|YP_001046398.1| PP-loop domain-containing protein [Methanoculleus marisnigri JR1]
gi|125861227|gb|ABN56416.1| PP-loop domain protein [Methanoculleus marisnigri JR1]
Length = 343
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 147/289 (50%), Gaps = 19/289 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +R L +C F FE + + I ++ ++G+ +A+ SGGKDS+
Sbjct: 3 CSKCRRDAVIFQRYSGL-HLCEHHFNRDFEAKAKRAIREHRWIESGDTVAVALSGGKDSS 61
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
+ F L L RR + L +++DEGISGYRD + Q K E G+P ++ D
Sbjct: 62 AVLFFLHRLLGERRD---VRLMAITVDEGISGYRDPN-QARKIAE-SMGVPWVTATFADE 116
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y T+DEIV G +C++CGV RR ++R A V K A G N DD A++VL+N LR
Sbjct: 117 YRITLDEIVARKGTGLSCSYCGVLRRALMNRIAREHDVTKFAYGFNLDDEAQSVLMNALR 176
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD RL+R +G +PR KPF Y E+E+ YA+ + C Y+ +A RG
Sbjct: 177 GDAERLTR---PMREAEGMVPRIKPFMYIPEREVAL-YAFLHVEGFDLAGCPYAGDALRG 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ----GTCERCG 298
R + D P ++ GE R T+ PE G CERCG
Sbjct: 233 DVRGILDDYTYRHPATKYSLVNLGEALR---GTERPETKMGFGICERCG 278
>gi|397779611|ref|YP_006544084.1| hypothetical protein BN140_0445 [Methanoculleus bourgensis MS2]
gi|396938113|emb|CCJ35368.1| UPF0021 protein [Methanoculleus bourgensis MS2]
Length = 296
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 153/305 (50%), Gaps = 12/305 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +R L +C + F FE + + I ++ ++G+ +A+ SGGKDS+
Sbjct: 3 CSKCRRDAVIFQRYSGL-HLCEQHFNRDFEAKAKRAIREHRWIRSGDTVAVALSGGKDSS 61
Query: 76 VLAFVLSEL-NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+ F L L + R + + L +++DEGI GYRD + I G+P S+++ Y
Sbjct: 62 AVLFFLHRLLHERRD--VRLMAITVDEGIGGYRDPDQARAIADRI--GVPWVTASFREEY 117
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+DEIV G +C++CGV RR ++R A V K A G N DD A++VL+N+LRG
Sbjct: 118 GVTLDEIVGRKGTGLSCSYCGVLRRALMNRVAREEGVTKFAYGFNLDDEAQSVLMNVLRG 177
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D RL+R G +PR KPF Y E+E+ YA+ + C Y+ A R
Sbjct: 178 DPYRLTRPAREVAGL---VPRIKPFMYIPEREVAL-YAFLHVEGFDLAGCPYAVGALRRD 233
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
R + D P ++ GE R + CERCG K C+ C +L+
Sbjct: 234 VRGLLDDYTYHHPATKYSLVNLGETLRNPERPQEEGIRVCERCGE-PCGKVCRVCQVLDE 292
Query: 315 LNRGL 319
+ RGL
Sbjct: 293 V-RGL 296
>gi|21228898|ref|NP_634820.1| hypothetical protein MM_2796 [Methanosarcina mazei Go1]
gi|452211286|ref|YP_007491400.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
gi|20907428|gb|AAM32492.1| conserved protein [Methanosarcina mazei Go1]
gi|452101188|gb|AGF98128.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
Length = 302
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 8/300 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN ++ + +C+ F E E +I + + K + IA+ SGGKDS+
Sbjct: 5 CKKCNHDAIIFQKYSGM-HLCKRHFIEDVERKIKLTVRRDYSIKKNDVIAVALSGGKDSS 63
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V +++ + L R + + + +S+DEGI GYR SL+ K+ G+ I S+KD +
Sbjct: 64 VALYIMHKILGDRPD--IQIVAISVDEGIHGYRPQSLELAKQLTEALGVRHIIKSFKDEH 121
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TMDE+ + K C++CGV R+ L+R A + K+ TGHN DD A+T+LLN RG
Sbjct: 122 GATMDELAVMDREKGTCSYCGVLRKSILNRVAIEIGATKLVTGHNLDDEAQTILLNHFRG 181
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ R+ R E G + R KP + EKE+ YA L +EC Y+ A RG
Sbjct: 182 DMERMVRLAPPVAVE-GLVMRAKPLRNIPEKEVAL-YALVNSLPVDFSECPYAGEALRGE 239
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVLL 312
RE + E P +++ + + + ++P C CG ++ C+AC LL
Sbjct: 240 IRELLNGFETNHPGTKYSLLRGFDKLVGALAKELPPAKIEKCRICGDTCTENICQACKLL 299
>gi|15921747|ref|NP_377416.1| hypothetical protein ST1453 [Sulfolobus tokodaii str. 7]
gi|15622534|dbj|BAB66525.1| hypothetical protein STK_14530 [Sulfolobus tokodaii str. 7]
Length = 322
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 175/333 (52%), Gaps = 41/333 (12%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQV--IVGNQLFKAGERIAIGASGGK 72
+C C R+A + +P T ++CR+CF E + + + I+G Q ++I + SGGK
Sbjct: 2 ICDVCRIREAEIYQPHTGRRLCRQCFIEDIRKRVEKEAEIIGLQ---KAKKILLAVSGGK 58
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYK 131
DS VLA L+ HN L +I EGI GY R + ++ +K+ G+ L S+K
Sbjct: 59 DSFVLADTLASFID-HN---KLIAYNIVEGIHGYNRKEQVEQLKKFLTDLGIELIEDSFK 114
Query: 132 DLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
D G+T+DE+VK K + CTFCG FRR+ ++ ++ D +ATGHN DD + +
Sbjct: 115 DSVGYTLDEMVKSSMEKGLNVSACTFCGGFRRKLINNAGRMVNADYVATGHNLDDEVQAI 174
Query: 188 LLNILRGDIARLSRCTLITTGEDGPIP-------RCKPFKYTYEKEIMFTYAYFKRLDYF 240
++N++RGD+ RL R D P+ R KP + YE E YAY+K ++
Sbjct: 175 VINLIRGDLIRLIRFG------DKPLKLSSKFVLRVKPLRKIYEWETTM-YAYYKGYNFQ 227
Query: 241 STECIY--SPNAYRGFAREFIKDLERLRPRAILDII----KSGENFR--ISTSTKMPEQG 292
EC Y + R RE + LE +P ++L+II K EN R ST++++ E
Sbjct: 228 EVECPYITTRPTLRAKVRELLYILEETKPGSLLNIIEEFDKISENVRKEYSTTSELRELP 287
Query: 293 TCERCGYISS--QKWCKACVLLEG---LNRGLP 320
C+ CG +S ++ CK C LL L++ LP
Sbjct: 288 RCKICGEPTSYGREICKNCELLIKSGLLHQNLP 320
>gi|313127354|ref|YP_004037624.1| hypothetical protein Hbor_26270 [Halogeometricum borinquense DSM
11551]
gi|448288172|ref|ZP_21479373.1| hypothetical protein C499_15305 [Halogeometricum borinquense DSM
11551]
gi|312293719|gb|ADQ68179.1| conserved hypothetical protein TIGR00269 [Halogeometricum
borinquense DSM 11551]
gi|445570211|gb|ELY24777.1| hypothetical protein C499_15305 [Halogeometricum borinquense DSM
11551]
Length = 322
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 23/320 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C+ R A + + +C F E+ + I + L + ER IG S
Sbjct: 3 CDKCD-RDAVMHAGYSGAHLCENHFCASVEKRVRGRIRKDSLVPRDATPEDPERWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + + +++ L+I EGI GYRD+S++ + ++V+
Sbjct: 62 GGKDSVVLTHILDETFGK-DPRIEMMALTIHEGIEGYRDESVEACVELSDDLQMRHELVT 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++ + C +CGVFRR L+ A DK+ TGHN DD AET L
Sbjct: 121 YEEEFGVQMDDVAREDPENMAPCAYCGVFRRDLLESYAEEFSADKLLTGHNLDDEAETAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+NIL GD+ ++++ + G D +PR KP + EKE+ YA+ K L
Sbjct: 181 MNILEGDVKQMAKHFDASLGPFDERNPSDDFVPRAKPLRDIPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF------RISTSTKMPEQGTCE 295
TEC ++ A+RG +E + DLE P I+ E R + + CE
Sbjct: 240 TECPHASEAFRGEIQELMLDLEDDHPGTRHSIMSGYEEIAEMAADRYRSGDDDVDLNDCE 299
Query: 296 RCGYISSQKWCKACVLLEGL 315
RCG +++ C+ C LLE +
Sbjct: 300 RCGSKTARDVCRKCRLLESI 319
>gi|407461606|ref|YP_006772923.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045228|gb|AFS79981.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 304
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 19/305 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A R + +++C ECF + + I +++ + E +A+ SGGKDS
Sbjct: 3 CDGC-ENLAVYTRKYSGQKLCSECFSNSIVRKTAKTISKHKMIQNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L ++ E++ HN+ + ++IDEGI GYR+++L+ V++ + G+ K+ SYKDL+
Sbjct: 62 ALLKIIHEMSSTHNFRIKA--ITIDEGIPGYRNEALEIVEKFCGKLGVEHKVYSYKDLFE 119
Query: 136 WTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
T+DE + L+ N C+ CG RR+A+D A + D IATGHN DD +T ++N
Sbjct: 120 ITLDE---ALDLRENEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVIN 176
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+L GD ++ T+ + + KPF YE EI+F YA+ + + S C +
Sbjct: 177 MLSGDTNKIGWMDPDTSS--NSLRKIKPFCEIYESEIVF-YAFTNNIPFQSEPCPHMNEG 233
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRIST---STKMPEQGTCERCGYISSQKWCK 307
R REF+ LE+ ++ +S R+S T E+ C++CG + C
Sbjct: 234 IRTEIREFLNSLEKQHSGIKNNLYQSV--LRVSNIVKETNYKEKMICKKCGNDCTGNVCS 291
Query: 308 ACVLL 312
C ++
Sbjct: 292 VCNMV 296
>gi|332796837|ref|YP_004458337.1| PP-loop domain-containing protein [Acidianus hospitalis W1]
gi|332694572|gb|AEE94039.1| PP-loop domain protein [Acidianus hospitalis W1]
Length = 319
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 18/310 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + +P T ++C+ECF + + + + L KA +I + SGGKDS
Sbjct: 2 ICDVCKSREAVVYQPHTGRRLCKECFIDDIRQRVKKEAEKQGLLKAN-KILLAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
LA L+ L +I EGISGY R + + +++ G+ L S+KD
Sbjct: 61 LTLADTLASFIDPKR----LVAFNIVEGISGYNRKEQAEKLRKYLDDLGIELISTSFKDS 116
Query: 134 YGWTMDEIV---KVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G+T+DE+V + GL + CTFCG FRR+ ++ +K D +ATGHN DD A+TV++
Sbjct: 117 VGYTLDEMVSSARAKGLNISACTFCGGFRRKLINDAGRQVKADLVATGHNLDDEAQTVIV 176
Query: 190 NILRGDIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-- 246
NILRGD+ RL R + D + R KP + YE E YA+ K ++ EC Y
Sbjct: 177 NILRGDVKRLVRLGDVPLKLSDKFVLRVKPLRKIYEWETTM-YAFLKGFEFQEVECPYIS 235
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP--EQGTCERCGYISS-- 302
+ R RE + +E+ +P ++L I++ + P E TC+ CG +S
Sbjct: 236 ARPTLRAKVRELLYLIEQQKPGSLLRIVEEFDKISELVRQHSPKEELPTCKICGEPTSYG 295
Query: 303 QKWCKACVLL 312
++ CK C L+
Sbjct: 296 REICKNCELM 305
>gi|448406266|ref|ZP_21572788.1| hypothetical protein C475_00620 [Halosimplex carlsbadense 2-9-1]
gi|445678105|gb|ELZ30600.1| hypothetical protein C475_00620 [Halosimplex carlsbadense 2-9-1]
Length = 339
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 141/287 (49%), Gaps = 35/287 (12%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + R + ++L LSI EGI GYRD+S+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTEILHDTFRE-DPRIELVALSIHEGIEGYRDESIDACEELTADL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
L ++VSY + +G MD++V+ G+ C +CGVFRR L+R A L DK+ TGHN
Sbjct: 113 DLRHEVVSYAEEFGVRMDDVVEDDPEGMAA-CAYCGVFRRDVLERYAEKLDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG-------------------------EDGPIP 214
DD A+T L+N+ GD+ +++ + G +D +P
Sbjct: 172 LDDEAQTALMNVFEGDVGQMASHYDASLGPFPEEDRHGDPVDPPSDPTERPRHAQDHHVP 231
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDII 274
R KP + EKE+ YA+ + L TEC ++ AYRG ++ + +E P I+
Sbjct: 232 RAKPLRDVPEKEVAL-YAHLRDLPAHITECPHAEEAYRGEVQQLLLGMEDDHPGTRHSIM 290
Query: 275 KSGENFRISTS-----TKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
E F + T P+ G CE CG + + C+ C LL+ L
Sbjct: 291 AGYEQFAALAASAFGGTDAPDYGECEVCGAPTGRTVCRKCDLLDALE 337
>gi|448727941|ref|ZP_21710282.1| n-type ATP pyrophosphatase superfamily protein [Halococcus morrhuae
DSM 1307]
gi|445788758|gb|EMA39461.1| n-type ATP pyrophosphatase superfamily protein [Halococcus morrhuae
DSM 1307]
Length = 320
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 160/321 (49%), Gaps = 25/321 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C+ R A + + +C E+ + + I + L ++ E IG S
Sbjct: 3 CTKCD-RDAVVHAAYSGAHLCEHHLRASVEKRVRRRIRQDGLIGDDATPESPETWLIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL--KI 127
GGKDS VL +L E + ++L L+I EGI GYRD+SL +E+ GL + ++
Sbjct: 62 GGKDSVVLTSILEE-TFAEDPRIELVALTIHEGIEGYRDESLDAA--SELADGLDIHHEV 118
Query: 128 VSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
VSY D + MD++V K C +CGVFRR L A DK+ TGHN DD A+T
Sbjct: 119 VSYTDEFDLEMDDVVEKDPEGMAACAYCGVFRRDLLADYAESFGADKLLTGHNLDDEAQT 178
Query: 187 VLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
L+N GD+A++++ + G D +PR KP + EKE+ YA+ L
Sbjct: 179 ALMNFFEGDVAQMAKHFDASLGPFDERTETDEFVPRAKPLRDVPEKEVAL-YAHLADLPV 237
Query: 240 FSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTS---TKMPEQGTCE 295
EC +S AYRG ++ + D+E P I+ E +++ S K + G CE
Sbjct: 238 HMAECPHSTEAYRGEIQDLLLDMEERHPGTRHSIMAGYEELAKLAASAYGAKDSDLGECE 297
Query: 296 RCGYISSQKWCKACVLLEGLN 316
RCG ++++ C+ C L E ++
Sbjct: 298 RCGNATTREVCRTCQLTEAVH 318
>gi|374630263|ref|ZP_09702648.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
gi|373908376|gb|EHQ36480.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
Length = 307
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 24/304 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A ++ + ++C F E E ++ I N++ G+RI +G SGGKDST
Sbjct: 12 CALCG-KPAVIRLSNSKIRLCSGHFIEEVENRVYAHIRNNKMISPGDRILVGLSGGKDST 70
Query: 76 VLAFVLSELNRRHNYGLDL-----FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSY 130
L +L H Y D +++DEGISGYR+++++ + G+ I+S+
Sbjct: 71 ALLLML------HGYRSDFKDAEPVAVTVDEGISGYREETVEAAVSIASELGIEHHIISF 124
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+++ +D+IV ++ C+ CGV RR+AL + A +KIATGHN DD A++V++N
Sbjct: 125 DEIFDADLDKIVAGKDVRA-CSVCGVLRRRALIKAAERFSANKIATGHNLDDEAQSVIMN 183
Query: 191 ILRGDIARLSRCTLITTGEDGP---IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+LRGD A L + T E P IPR KP EKEI+ TY + EC Y+
Sbjct: 184 VLRGDSASL----IQDTSEGYPGYFIPRIKPLSVLSEKEIV-TYLLVRGFYRDLPECPYA 238
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKW 305
A R R + +LE P ++K E + S K P+ C CG ISS +
Sbjct: 239 GTAMRLEVRIMLAELEHRHPGTKGHLMKFQETLKQSCYEK-PDGKFYNCRICGEISSSEV 297
Query: 306 CKAC 309
C+ C
Sbjct: 298 CQVC 301
>gi|16082141|ref|NP_394578.1| hypothetical protein Ta1119 [Thermoplasma acidophilum DSM 1728]
gi|10640432|emb|CAC12246.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 314
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 146/302 (48%), Gaps = 6/302 (1%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGN-QLFKAGERIAIGASGGKDS 74
CS C + L +CRE F ++ E+ + I L K RI++ SGGKDS
Sbjct: 3 CSKCQAEAIYFAKYNGL-YLCREHFNDMIEKRVKSEIRNQVDLKKPMVRISVAISGGKDS 61
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
+V ++L + L++R N L F ++DEGISGYR L++ + G+ I+ ++D
Sbjct: 62 SVTLYLLHKILSKRRNVELTAF--TVDEGISGYRPAGLESAIKLTKMLGVDHSIIRFQDS 119
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G T+D IV + C++CG RR+ ++ A D +A G N DD ++++L+N+ +
Sbjct: 120 FGMTLDSIVGADASRIPCSYCGPLRRKLINEMAERQNADYVALGLNLDDYSQSILMNVAK 179
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD RL R + +DG + R P + EKE++ YA + + S+ C Y A R
Sbjct: 180 GDYDRLLRMSPQKEAKDGLVRRIAPLRSVLEKEVVL-YAVINGIPFDSSWCPYYSRAQRN 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
RE + L P I+K E R G C CG + C AC +E
Sbjct: 239 IFREVVNTLSEYNPSTKFSILKFFERARSDVQRNDKALGRCRICGAPTENDVCSACAAME 298
Query: 314 GL 315
L
Sbjct: 299 SL 300
>gi|91772989|ref|YP_565681.1| hypothetical protein Mbur_0991 [Methanococcoides burtonii DSM 6242]
gi|91712004|gb|ABE51931.1| PP-loop family protein [Methanococcoides burtonii DSM 6242]
Length = 302
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 10/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN R A + + + IC+ F E E ++ I + G+ IA+ SGGKDS
Sbjct: 5 CMKCN-RDAIIFQKYSGMHICKRHFIEDVERKVKLTIRKQYKIEKGDIIAVALSGGKDSV 63
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VL ++L ++ RR +++ L+IDEGI+GYR+++L ++ + G+ + S+KD
Sbjct: 64 VLLYLLHKIFGVRR---DIEIVALTIDEGIAGYREETLAKARKLTSELGIRHIVRSFKDE 120
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
Y T+DE+ C++CGV R+ +++ A+ + +K+ATGHN DD A+T+++N L
Sbjct: 121 YDKTLDELTAQERKLGACSYCGVLRKSLMNKIANEIGANKLATGHNLDDEAQTIMMNHLG 180
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ R+ R + E G + R KP + EKE+ YA L + +EC Y+ A RG
Sbjct: 181 GDVDRMIRLSPPREIE-GLVLRAKPLRKVPEKEVAL-YAIVNELPFDMSECPYAHEALRG 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGTCERCGYISSQKWCKACVL 311
R+ I + E P I++ + I+ E C CG + C+AC L
Sbjct: 239 EVRDMINEFEVRHPGTKYSIMRGFDKTVGLIAKEYPQAELSKCRICGETCTATLCQACKL 298
Query: 312 L 312
L
Sbjct: 299 L 299
>gi|448731139|ref|ZP_21713442.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
saccharolyticus DSM 5350]
gi|445792733|gb|EMA43334.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
saccharolyticus DSM 5350]
Length = 320
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 27/322 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C+ R+A L + +C E+ + + I + L + E +G S
Sbjct: 3 CTKCD-REAVLHAAYSGAHLCEHHLRASVEKRVRRRIREDGLIGDDATPQNPETWLLGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L++ + ++L L+I EGI GYRD+SL + + ++V+
Sbjct: 62 GGKDSVVLGSILAD-TFAEDPRIELVALTIHEGIKGYRDESLDAASAFADEQEISHEVVT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y D + MD +V K C +CGVFRR+ L A DK+ TGHN DD A+T +
Sbjct: 121 YADEFDLEMDRVVEKDPENMAACAYCGVFRRELLAEYAEAYGADKLLTGHNLDDEAQTAM 180
Query: 189 LNILRGDIARLSRCTLITTGEDGP----------IPRCKPFKYTYEKEIMFTYAYFKRLD 238
+N L GD+A++++ + GP +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVAQMAKHFDASL---GPFPERSESTEFVPRAKPLRDVPEKEVAL-YAHLADLP 236
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM----PEQGTC 294
EC +S AYRG ++ + DLE P I+ E F + P+ G C
Sbjct: 237 VHMAECPHSSEAYRGEIQQLLFDLEERHPGTRHSIMAGYEEFAKLAAEAYRGDGPDLGEC 296
Query: 295 ERCGYISSQKWCKACVLLEGLN 316
ERCG ++++ C+ C L E ++
Sbjct: 297 ERCGGTTTREICRTCQLTEAVH 318
>gi|41615304|ref|NP_963802.1| hypothetical protein NEQ523 [Nanoarchaeum equitans Kin4-M]
gi|40069028|gb|AAR39363.1| NEQ523 [Nanoarchaeum equitans Kin4-M]
Length = 324
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 164/306 (53%), Gaps = 20/306 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C++ K C+E F E F+ + I +F G+R+A+ SGGKDS
Sbjct: 17 CSYCDKPAIYYDGKK---YYCKEHFLEYFKNLAFKAIKEFNMFSPGDRVAVAVSGGKDSV 73
Query: 76 VLAFVLSELNRRHNYGLDL---FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
L L+ +H L+L L+IDEGI GYRD +L +K ++ L +KI+S+K+
Sbjct: 74 SLLHFLT----KHKDELELKEVVGLAIDEGIKGYRDVTLNYLKDFAKKHNLKIKIISFKE 129
Query: 133 LYGWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G T+DE+ ++ N CT+CGVFRR L++ A + D +ATGHN +D A+TV+
Sbjct: 130 EIGLTLDEMFELTKKYNLGYWPCTYCGVFRRWLLNKYA-IEHFDVLATGHNLNDEAQTVI 188
Query: 189 LNILRGDIARLSRCTLIT--TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
LN+ +I L++ +T + I R KPF Y EKE Y+ +L+ EC Y
Sbjct: 189 LNLAEHNIKDLAKGGPVTGIKRHNKFIKRVKPFYYITEKETT-IYSIVNKLNVPYIECPY 247
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKW 305
+ A+R + R+ + +E +R +IIK +FR + E TC+ CG+ ++++
Sbjct: 248 ARGAFRIYVRDLLYKMEHVRELH-ENIIKKYLSFRDKLQKRYNFELKTCKICGFPTTREI 306
Query: 306 CKACVL 311
C+AC L
Sbjct: 307 CQACQL 312
>gi|428167668|gb|EKX36623.1| hypothetical protein GUITHDRAFT_117168 [Guillardia theta CCMP2712]
Length = 92
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%)
Query: 138 MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIA 197
MD IV IG K NCTFCGVFRRQALDRGAS+L+ DKI TGHNADDIAETVLLNILRGD+
Sbjct: 1 MDSIVSHIGRKGNCTFCGVFRRQALDRGASILEADKIVTGHNADDIAETVLLNILRGDVP 60
Query: 198 RLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
RL RCT I+TG DG +PR KPFK+ YEKEI+
Sbjct: 61 RLQRCTQISTGMDGNLPRSKPFKHAYEKEIVM 92
>gi|448737281|ref|ZP_21719322.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
thailandensis JCM 13552]
gi|445803741|gb|EMA54017.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
thailandensis JCM 13552]
Length = 320
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L E + ++L L+I EGI GYRD+SL +E+ GL +
Sbjct: 58 IGLSGGKDSIVLTSILEE-TFAEDPRIELVALTIHEGIEGYRDESLDAA--SELADGLDI 114
Query: 126 --KIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
++VSY D + MD++V K C +CGVFRR L A DK+ TGHN DD
Sbjct: 115 HHEVVSYTDEFDLEMDDVVEKDPEGMAACAYCGVFRRDLLADYAEAFGADKLLTGHNLDD 174
Query: 183 IAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFK 235
A+T L+N GD+A++++ + G D +PR KP + EKE+ YA+
Sbjct: 175 EAQTALMNFFEGDVAQMAKHFDASLGPFDERAETDEFVPRAKPLRDVPEKEVAL-YAHLA 233
Query: 236 RLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT-- 293
L EC +S AYRG +E + D+E P I+ E ++ E G
Sbjct: 234 DLPVHMAECPHSTEAYRGEIQELLLDMEERHPGTRHSIMAGYEELAKLAASAYGEDGADL 293
Query: 294 --CERCGYISSQKWCKACVLLEGLN 316
CERCG +++ C+ C L E ++
Sbjct: 294 GECERCGNATTRDVCRTCQLTEAVH 318
>gi|333988276|ref|YP_004520883.1| hypothetical protein MSWAN_2074 [Methanobacterium sp. SWAN-1]
gi|333826420|gb|AEG19082.1| protein of unknown function UPF0021 [Methanobacterium sp. SWAN-1]
Length = 287
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 153/286 (53%), Gaps = 9/286 (3%)
Query: 32 LEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYG 91
++Q+ +E F E VI +L + GE+I +G SGGKDS + ++LS+ ++
Sbjct: 1 MKQLDKESFNSYIENTARSVIKDYRLIEPGEKIVVGLSGGKDSVLTLYILSKF--MDDFD 58
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNC 151
++ +SIDEGISGYR + ++T ++ G+ L S+KD +G+ +D+I K++C
Sbjct: 59 FEMVAISIDEGISGYRCEGIKTARKIARDLGVELVEKSFKDEFGFLLDDISDF--YKSSC 116
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGED 210
CGVFRR L++ A L DK+ATGHN DD ++ L++ R D R + +
Sbjct: 117 IPCGVFRRTLLNKTAYQLGADKLATGHNMDDEIQSFLMSFARADFRRFIKFGPKLDKIHP 176
Query: 211 GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAI 270
+PR KP EK++ +A +D EC YS + R ++ + LE RP
Sbjct: 177 KLVPRIKPLWKIPEKDVG-IWAILNGIDVHFAECPYSHTSLRAKMKDHLNRLEGKRPGTK 235
Query: 271 LDIIKS-GENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
+ I++S + F+ + E G CE CG SS + CKAC ++E +
Sbjct: 236 IAILESFDKTFKFDKI--VVELGECELCGEPSSLRICKACEMVEDI 279
>gi|88603458|ref|YP_503636.1| hypothetical protein Mhun_2212 [Methanospirillum hungatei JF-1]
gi|88188920|gb|ABD41917.1| Protein of unknown function UPF0021 [Methanospirillum hungatei
JF-1]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 19/302 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + L R + + +C + E E E+ + ++ +L K + + SGGKDST
Sbjct: 8 CEKCEKPAVYLDREREI-HLCSDHLKESVENEVRRYLITKRLPKT---LGVAFSGGKDST 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLSE+ R + + L++DEGI GYR D+++ + +P +I+ ++DLYG
Sbjct: 64 ALLKVLSEI--RSEFPSSIIALTVDEGIEGYRQDTIRAATETCLTLRIPHEIIRFQDLYG 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++D +V +N CT CG+ RR+AL+ A K+ IATGHN DD A+T ++N + GD
Sbjct: 122 HSLDHLVSG-SERNACTICGILRRRALEVLAQKHKITMIATGHNQDDHAQTTVMNAISGD 180
Query: 196 IARLSRCTLITTGEDGP---IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
+ + I TG + R KPF EKE+ YA L +EC Y+ ++ R
Sbjct: 181 VRK------IFTGYEPSSWYAQRIKPFARVSEKEVTL-YALLSGLFKDLSECPYAVSSLR 233
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKACV 310
G R + E+ P A+ + + E R ++ TC CG+ S C+ C+
Sbjct: 234 GEVRTLLYQYEQKHPGAMRNAARCEEEIRERLGEIYQQEAYKTCSICGWPGSGTICQVCM 293
Query: 311 LL 312
+L
Sbjct: 294 VL 295
>gi|354612153|ref|ZP_09030105.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
gi|353191731|gb|EHB57237.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
Length = 320
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 21/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+ R+A + + +C +E E + + + + + A E IG S
Sbjct: 3 CTKCD-REAVMHAAYSGSHLCDRHLFESVERRVRRRVREDDMLPADATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + ++L L+I EGI GYRD+SL+ G+ ++V+
Sbjct: 62 GGKDSVVLTDILHE-TFDEDPRVELVALTIHEGIEGYRDESLEACVELADDRGIRHEVVT 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y D + MD++ L C +CGVFRR L R A L DK+ TGHN DD AET L
Sbjct: 121 YADEFDVEMDDVAADDPLDMAPCAYCGVFRRDLLARYAEELDADKLLTGHNLDDEAETAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+NI G++ ++++ + G ++G IPR KP + EKE+ YA + L
Sbjct: 181 MNIFEGNVEQVAKHFDASLGPFDERREKEGMIPRAKPLRDVPEKEVAL-YAQLRELPVHM 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ----GTCERC 297
EC +S A+RG ++ + LE P I+ E + + ++ G CE C
Sbjct: 240 AECPHSSEAFRGEIQDLLLQLEENHPGTRHSIMAGYEELAGIAADEYGDEDRDVGECEEC 299
Query: 298 GYISSQKWCKACVLLEGLN 316
G ++++ C+ C L++ +N
Sbjct: 300 GAPTTREKCRKCALVDAVN 318
>gi|15669347|ref|NP_248152.1| hypothetical protein MJ_1157 [Methanocaldococcus jannaschii DSM
2661]
gi|2501587|sp|Q58558.1|Y1157_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1157
gi|1592323|gb|AAB99161.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 341
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 157/307 (51%), Gaps = 20/307 (6%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS N+ A + + +C+ECF + E +V+ G + + +I IG SGGKDS
Sbjct: 39 LCSCGNE--AFYYQKYSNRHLCKECFKKDIERRAKKVL-GKDIIRNNVKIGIGISGGKDS 95
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V+A++L EL +H L +DEGI G+R+ + + VK +Y L LKI+ ++D
Sbjct: 96 LVMAYILKEL-FKHIPNAKLICFFVDEGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEI 154
Query: 135 GWTMDEIVK-----VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G+T+DEIVK + + C+FCGV RR L++ A D +A GHN DD +T+L+
Sbjct: 155 GYTLDEIVKNDYLSKLNIGKPCSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQTILM 214
Query: 190 NILRGDIARLSRCTLITTGED----GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
N + G+I +I G++ G + R KP K E+E+ YA + Y C
Sbjct: 215 NYVEGNIK-----NIIQFGKEFEGGGFVKRIKPLKLIPEEEVKL-YAEINNIKYQREPCP 268
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
YS +YR ++ I+ LE +P I++ E + K E CE CG+ S
Sbjct: 269 YSSLSYRHRMKKVIEILEEEKPGVKFSILRGYEKLLKYLNVK-EEIRRCEICGFPCSGNI 327
Query: 306 CKACVLL 312
CK C L
Sbjct: 328 CKVCSWL 334
>gi|386874674|ref|ZP_10116907.1| hypothetical protein TIGR00269 [Candidatus Nitrosopumilus salaria
BD31]
gi|386807543|gb|EIJ66929.1| hypothetical protein TIGR00269 [Candidatus Nitrosopumilus salaria
BD31]
Length = 304
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 158/303 (52%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A R + E++C +CF + + I + + E +A+ SGGKDS
Sbjct: 3 CDRC-ENLAVYTRKYSGEKLCSKCFSNSIVRKTAKTISKYNMIQHNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +++E+ HN+ + ++IDEGI GYR+++L+ V++ + + K+ +YKDL+
Sbjct: 62 ALLKIINEMASTHNFQIKA--ITIDEGIPGYRNEALEIVEKFCSELNVEHKVYAYKDLFE 119
Query: 136 WTMDEIVKVIGLK--NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+DE +++ K ++C+ CG RR+A+D A+ + D IATGHN DD +T ++N+L
Sbjct: 120 MTLDEALELRDNKKTSSCSICGTLRRRAIDFAANDVGADVIATGHNLDDTLQTFVINMLS 179
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD ++ T+ + + KPF YE EI+F YA+ + + S C + R
Sbjct: 180 GDTTKIGWMDPDTSS--NSLRKIKPFCEIYESEIVF-YAFTNNMPFQSEPCPHMNEGIRT 236
Query: 254 FAREFIKDLER----LRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
REF+ LE ++ I+K + + S S ++ TC +CG + C C
Sbjct: 237 EIREFLNSLENQHSGIKNNLYQSILKVSQIVKNSNS---KQKTTCTKCGSECTGNVCSVC 293
Query: 310 VLL 312
++
Sbjct: 294 SMV 296
>gi|448717768|ref|ZP_21702787.1| PP-loop domain-containing protein [Halobiforma nitratireducens JCM
10879]
gi|445785497|gb|EMA36287.1| PP-loop domain-containing protein [Halobiforma nitratireducens JCM
10879]
Length = 319
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C+Q +A + + + +C + F E E+ + + + + L + E IG S
Sbjct: 3 CNRCDQ-EAVMHAAYSGQHLCADHFRESVEKRVRRRVRRDDLVPRDATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ + + ++VS
Sbjct: 62 GGKDSVVLTKILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVDLAAELDIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y D +G MD++V+ C +CGVFRR L R A L+ D + TGHN DD A+T L
Sbjct: 121 YADEFGIEMDDVVEDDPENMAACAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G + +PR KP + EKEI YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREEQTEFVPRAKPLRDVPEKEIAL-YAHVEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR-ISTSTKMPEQGT----CER 296
TEC +S AYR ++ + DLE P I+ E I+ T + G C+R
Sbjct: 240 TECPHSSEAYRAEIQQLLYDLEENHPGTRHSILSGYEELAGIAAETYGGDDGADLRDCDR 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|448456615|ref|ZP_21595322.1| PP-loop domain protein [Halorubrum lipolyticum DSM 21995]
gi|445811760|gb|EMA61762.1| PP-loop domain protein [Halorubrum lipolyticum DSM 21995]
Length = 326
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 20/272 (7%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD+SL
Sbjct: 54 DRWVIGLSGGKDSVALTQILDDVFGK-DPRVEMLALTIHEGIEGYRDESLDACVELAEDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
L ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN
Sbjct: 113 SLRHEVVSYEEEFDVRMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNL 172
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAY 233
DD A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 173 DDEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIAL-YCH 231
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFRI--S 283
+ L EC +S AYRG + I +LE P A I+ + E +R
Sbjct: 232 VRDLPTHMAECPHSSEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGD 291
Query: 284 TSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
+ P+ G CERCG +S+ C+ C LLE +
Sbjct: 292 AAADSPDLGECERCGSKTSRDVCRKCRLLESI 323
>gi|448684832|ref|ZP_21692919.1| hypothetical protein C444_04187 [Haloarcula japonica DSM 6131]
gi|445782763|gb|EMA33604.1| hypothetical protein C444_04187 [Haloarcula japonica DSM 6131]
Length = 331
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY D +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYADEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA F+ L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFQDLPAHITECPHAEEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQGT-----CERCGYISSQKWCKACVLLEGL 315
+ T E G C+ CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENGDTDYGECDNCGSPTARDLCRKCNLLDAL 328
>gi|333910340|ref|YP_004484073.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333750929|gb|AEF96008.1| protein of unknown function UPF0021 [Methanotorris igneus Kol 5]
Length = 304
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 18/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + ++ L +C+ECF + E ++ +V+ G + + +I +G SGGKDS
Sbjct: 3 CSKCGKEAIYHQKYSGL-YLCKECFIKDVERKVRKVL-GRNIIRNNMKIGVGLSGGKDSV 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+ ++L++ + ++ + +DEGI G+R + + V +YG+ KI+ ++ G
Sbjct: 61 VMTYILNKFFKPIPNS-EIIVFFVDEGIKGFRKVARKFVVEFCEEYGIKYKIIPLEEEIG 119
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
++D+IVK+ KN C+FCGV RR+ L+R A + +A GHN DD+A+ V++N
Sbjct: 120 VSLDDIVKIAREKNLTLNPCSFCGVMRRKLLNRVALKEGCNYLAIGHNLDDMAQAVMMNY 179
Query: 192 LRGDIARLSRCTLITTGEDGPIP----RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+ G I +L R G+D P R +P KY E+E+ YA L Y C YS
Sbjct: 180 IDGAIEKLVR-----LGKDVEHPLLVKRIRPLKYVPEEEVQL-YADLVGLKYQKEPCPYS 233
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
+YR E I LE P + I+ E KM E TC+ CG +S CK
Sbjct: 234 SISYRAEISEIIDKLEDSHPGTMHSIVSGFEKLIKHLGIKM-EVKTCKICGEPASGDICK 292
Query: 308 ACVLLEGL 315
C+ +E L
Sbjct: 293 VCLWMEKL 300
>gi|374630825|ref|ZP_09703210.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
gi|373908938|gb|EHQ37042.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
Length = 296
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 13/304 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C +R A L + + +C E F E ++ + I K+G++IA+ SGGKDST
Sbjct: 3 CSKC-KRDAVLFQRYSGMHLCEEHFTIDLETKVKKTIRKEGWIKSGDKIAVALSGGKDST 61
Query: 76 VLAFVLSELN--RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L + L + RR +++F ++IDEGISGYRD ++ + G+ S+K+
Sbjct: 62 ALLYFLKKTFAIRRD---IEIFAVTIDEGISGYRD--IKICENIAESGGVKFHTASFKEH 116
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G T++EIV+ G N+C++CGV RRQ L++ A KIA G N DD A++V++N+LR
Sbjct: 117 FGITLNEIVQKKGDINSCSYCGVLRRQVLNKTARDAGATKIAYGFNLDDEAQSVMMNVLR 176
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD L R G +PR KPFK E+EI YA Y C YS NA R
Sbjct: 177 GDAVTLLRKEKPVLGM---LPRIKPFKTIPEREIAL-YARLHTEGYEERGCPYSHNALRA 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
R + P ++ GE + TC CG C+ C +L+
Sbjct: 233 DVRGILNQYNYSHPATKYALLNLGEKLKSGIPADNSGAETCAACGE-PVFGTCRVCGMLK 291
Query: 314 GLNR 317
L +
Sbjct: 292 ELKK 295
>gi|150402525|ref|YP_001329819.1| PP-loop domain-containing protein [Methanococcus maripaludis C7]
gi|150033555|gb|ABR65668.1| PP-loop domain protein [Methanococcus maripaludis C7]
Length = 311
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 154/287 (53%), Gaps = 15/287 (5%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
CR CF + + ++ + + G + K ++A+G SGGKDS V+A +L+E ++ +
Sbjct: 22 CRTCFIKETKRKVRKTL-GRDVLKNNIKVAMGLSGGKDSLVMAHILNEFYKQIPKS-KIL 79
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN----NC 151
+ ++EGI GYR D + + ++G+ +IV +KD G +DEIVK+ KN C
Sbjct: 80 AIIVNEGIEGYRTDGIDAAVKFCEEHGIEYRIVHFKDYLGTNLDEIVKLAKEKNLTMNPC 139
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+FCGV RR+ L+R + K D +A GHN DD+A+ V++N + GD+ +L+ +
Sbjct: 140 SFCGVIRRKILNRVSIEEKCDYLAIGHNLDDVAQAVMMNYIEGDVKKLA---FLGKSLKN 196
Query: 212 P--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
P + R KP + E+E++ A L Y + C YS ++R E LE+ P A
Sbjct: 197 PKFVKRIKPLEKIPEEEVLLI-ADLLELKYHKSPCPYSCLSFRSEVCEITDTLEKNHPGA 255
Query: 270 ILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKACVLLEGL 315
I++ E R+ ++P G C+ CG +S+ + CK C L+ L
Sbjct: 256 KYSIVRGYE--RLLEHIELPGYTGECKICGDLSATEVCKVCSYLKNL 300
>gi|161527617|ref|YP_001581443.1| PP-loop domain-containing protein [Nitrosopumilus maritimus SCM1]
gi|160338918|gb|ABX12005.1| PP-loop domain protein [Nitrosopumilus maritimus SCM1]
Length = 304
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 19/305 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A R + +++C +CF + + I + + K E +A+ SGGKDS
Sbjct: 3 CDYC-ENLAVYTRKYSGQKLCSKCFSNSIVRKTAKTISKHNMIKNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L ++ E+ HN+ + ++IDEGI GYR+++L+ V++ + G+ K+ SYK+L+
Sbjct: 62 ALLKIIHEMASSHNFRIKT--ITIDEGIPGYRNEALEIVEKFCGELGVEHKVYSYKNLFE 119
Query: 136 WTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
T+DE + L+ N C+ CG RR+A+D A + D IATGHN DD +T ++N
Sbjct: 120 LTLDE---ALDLRENEKTSSCSICGTLRRRAIDHAAKDVGADVIATGHNLDDTLQTFVIN 176
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+L GD ++ T+ + + KPF YE EI+F YA+ + + S C +
Sbjct: 177 MLSGDTNKIGWMEPDTSS--NSLRKIKPFCEIYESEIVF-YAFTNDIPFQSEPCPHMNEG 233
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRIST---STKMPEQGTCERCGYISSQKWCK 307
R REF+ LE+ ++ +S R+S T E+ C++CG + C
Sbjct: 234 IRTEIREFLNSLEKQHSGIKNNLYQSI--LRVSNIVKETNYKEKTVCKKCGSDCTGNVCS 291
Query: 308 ACVLL 312
C ++
Sbjct: 292 VCNMI 296
>gi|448681000|ref|ZP_21691146.1| hypothetical protein C443_16041 [Haloarcula argentinensis DSM
12282]
gi|445768058|gb|EMA19145.1| hypothetical protein C443_16041 [Haloarcula argentinensis DSM
12282]
Length = 331
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYAEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA F+ L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFQDLPAHITECPHAEEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQGT-----CERCGYISSQKWCKACVLLEGL 315
+ T E G CE CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENGDTDYGECENCGAPTARDLCRKCNLLDAL 328
>gi|150401224|ref|YP_001324990.1| PP-loop domain-containing protein [Methanococcus aeolicus Nankai-3]
gi|150013927|gb|ABR56378.1| PP-loop domain protein [Methanococcus aeolicus Nankai-3]
Length = 311
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 151/308 (49%), Gaps = 17/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + + C+ECF + + + I G + I +G SGGKDS
Sbjct: 9 CSLCKTNPKIYYQRHSGLNFCKECFIKYILKRARKTI-GRKNITKDMTIIVGLSGGKDSL 67
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+A VL EL + + + +DEGI GYR + + +Y + KI ++K+ G
Sbjct: 68 VMAHVLKELYKPIP-NTRIIGVMVDEGIEGYRKEGITHAIEFCEEYNMEYKIATFKETVG 126
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+ +DEIVK+ KN CTFCGV RR+ L++ + D +A GHN DDIA+ V++N
Sbjct: 127 YNLDEIVKIAKEKNVNLNPCTFCGVIRRKILNKVSLNENADYLAIGHNLDDIAQAVMMNY 186
Query: 192 LRGDIARLSRCTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
++GDI +L+ G+D + R KP + E E++ +A L+Y C YS
Sbjct: 187 IKGDINKLA-----ILGKDAGSSLFVKRMKPLQDIPEHEVLL-FADLIGLNYHKDPCPYS 240
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
+YR + +++LE+ P I+ SG I C+ CG S + CK
Sbjct: 241 SISYRAEVSDIVENLEKKHPGTSYSIV-SGFKKLIEHIPVEKNMSICKYCGEAGSSEICK 299
Query: 308 ACVLLEGL 315
+C LLE L
Sbjct: 300 SCALLENL 307
>gi|448471975|ref|ZP_21601002.1| PP-loop domain protein [Halorubrum aidingense JCM 13560]
gi|445820402|gb|EMA70225.1| PP-loop domain protein [Halorubrum aidingense JCM 13560]
Length = 324
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 18/271 (6%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD+SL
Sbjct: 54 DRWVIGLSGGKDSVALTKILDDVFGQ-DPRVEMLALTIHEGIEGYRDESLDACVELAADL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
+ ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN
Sbjct: 113 SIRHEVVSYEEEFDVQMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNL 172
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAY 233
DD A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 173 DDEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIAL-YCH 231
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFRISTS 285
+ L EC +S AYRG + I +LE P A I+ + E +R
Sbjct: 232 VRDLPVHMAECPHSSEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGD 291
Query: 286 TKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
+ P+ CERCG +S+ C+ C LL+ +
Sbjct: 292 DESPDLRECERCGSKTSRTVCRKCRLLDAIE 322
>gi|222478949|ref|YP_002565186.1| PP-loop domain protein [Halorubrum lacusprofundi ATCC 49239]
gi|222451851|gb|ACM56116.1| PP-loop domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 326
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 140/272 (51%), Gaps = 20/272 (7%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD+S+
Sbjct: 55 RWVIGLSGGKDSVALTQILDDVFGK-DPRVEMLALTIHEGIEGYRDESIDATIELTEDLS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+ ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 IRHEVVSYEEEFDVQMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDERGGTDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFRI--ST 284
+ L EC +S AYRG + I DLE P A I+ + E +R
Sbjct: 233 RDLPTHMAECPHSSEAYRGEIQSTIHDLEENHPGARHSIMAGYEELSALAAEAYREGGDA 292
Query: 285 STKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
+ P+ G CERCG +S+ C+ C LLE +
Sbjct: 293 AADSPDLGECERCGSKTSRDVCRKCRLLESIE 324
>gi|448353317|ref|ZP_21542094.1| PP-loop domain-containing protein [Natrialba hulunbeirensis JCM
10989]
gi|445640894|gb|ELY93980.1| PP-loop domain-containing protein [Natrialba hulunbeirensis JCM
10989]
Length = 319
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 159/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPKDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + + ++L L+I EGI GYRD SL + ++VS
Sbjct: 62 GGKDSVVLTQILHETFAK-DPRIELVGLTIHEGIEGYRDKSLDACVELSDDLDIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L R A L D + TGHN DD A+T L
Sbjct: 121 YEEEFGIQMDDVVEDDPENMAACAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREQQDEFVPRAKPLRDVPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E TS + E G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELASITSDEFSGEDGADLQDCSE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLEAL 318
>gi|408382641|ref|ZP_11180184.1| hypothetical protein A994_09296 [Methanobacterium formicicum DSM
3637]
gi|407814717|gb|EKF85341.1| hypothetical protein A994_09296 [Methanobacterium formicicum DSM
3637]
Length = 286
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 21/289 (7%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
F + E ++ +VI+ L G+++A+ SGGKDS + +L +L + + +L ++I
Sbjct: 9 FNQELENKVKKVIMDYNLIDEGDKVAVALSGGKDSVLTLHILDKLLCENEFDFELLAIAI 68
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
DEGISGYR+D ++ + N + G+ VS + G+++D+ + + C CGVFRR
Sbjct: 69 DEGISGYREDGTESARNNASELGVEYHEVSLESEMGFSLDQAAQF--FQTACVPCGVFRR 126
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP------- 212
L+R A L DK+ATGHN DD ++ L++ R D+ R ++ GP
Sbjct: 127 YLLNRTAHQLGADKLATGHNLDDEVQSFLMSFARADVRRFAKF--------GPKQERIHP 178
Query: 213 --IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAI 270
+PR KP EKE+ +A +D EC Y+ + R + ++ LE RP
Sbjct: 179 KMVPRIKPLWLVPEKEVGM-WAVMNEVDVHLAECPYAYQSLRSRLKNYLNHLEENRPGNK 237
Query: 271 LDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
L++++ + + K + C+ CG SS CKAC + E + L
Sbjct: 238 LNLLQFFQK-NLHIDKKKVKINECQICGEPSSASICKACEMQEFIKNEL 285
>gi|452208566|ref|YP_007488688.1| putative tRNA 2-thiolation protein [Natronomonas moolapensis
8.8.11]
gi|452084666|emb|CCQ38013.1| putative tRNA 2-thiolation protein [Natronomonas moolapensis
8.8.11]
Length = 326
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 140/269 (52%), Gaps = 17/269 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
+G SGGKDS VL +L E + ++L L++ EGI GYRD SL+ +
Sbjct: 58 VGLSGGKDSVVLTHLL-EGTFASDPRVELVALTVHEGIDGYRDASLEACLELTDDLDIEH 116
Query: 126 KIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
++VSY D YG MD + + G+ C +CGVFRR AL R A DK+ TGHN DD
Sbjct: 117 EVVSYADEYGVEMDAVAEDDPEGMAP-CAYCGVFRRDALSRYADEYGADKLLTGHNLDDE 175
Query: 184 AETVLLNILRGDIARLSRCTLITTG-------EDGP-IPRCKPFKYTYEKEIMFTYAYFK 235
A+T ++N+L GDIA++++ + G +D P +PR KP + EKE+ YA+
Sbjct: 176 AQTAMMNLLSGDIAQVAKHFDASLGSFEEREVDDSPFVPRAKPLRDIPEKEVAL-YAHLA 234
Query: 236 RLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT- 293
L EC ++ AYRG +E + LE P I+ E R++ +G
Sbjct: 235 DLPVHMAECPHASEAYRGEIQELLYGLEDDHPGTRHSIMSGYEELARLAAEAHRGGEGPR 294
Query: 294 --CERCGYISSQKWCKACVLLEGLNRGLP 320
C+RCG ++ + C+ C L++ + LP
Sbjct: 295 GECDRCGAPTNNEVCRKCDLVDAVGGELP 323
>gi|448665409|ref|ZP_21684684.1| hypothetical protein C442_04339 [Haloarcula amylolytica JCM 13557]
gi|445773090|gb|EMA24124.1| hypothetical protein C442_04339 [Haloarcula amylolytica JCM 13557]
Length = 331
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 139/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L A L DK+ TGHN
Sbjct: 113 GIEHVTVSYAEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSEYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA FK L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFKDLPAHITECPHADEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQGT-----CERCGYISSQKWCKACVLLEGL 315
+ T E G C+ CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENGDTDYGECDNCGSPTARDLCRKCNLLDAL 328
>gi|448359203|ref|ZP_21547865.1| PP-loop domain-containing protein [Natrialba chahannaoensis JCM
10990]
gi|445643877|gb|ELY96913.1| PP-loop domain-containing protein [Natrialba chahannaoensis JCM
10990]
Length = 319
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIA------IGAS 69
C+ C++ +A + + +C + F E E+ + + + + L A IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPKDATPANPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + + ++L L+I EGI GYRD SL + ++VS
Sbjct: 62 GGKDSVVLTQILHETFAK-DPRIELVGLTIHEGIEGYRDKSLDACVELSDDLDIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L R A L D + TGHN DD A+T L
Sbjct: 121 YEEEFGIQMDDVVEDDPENMAACAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREQQDEFVPRAKPLRDVPEKEVAL-YAHINDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E TS + E G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELAGITSDEFSGEDGADLQDCAE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREICRKCSLLEAL 318
>gi|389846032|ref|YP_006348271.1| hypothetical protein HFX_0558 [Haloferax mediterranei ATCC 33500]
gi|448616350|ref|ZP_21665060.1| hypothetical protein C439_07665 [Haloferax mediterranei ATCC 33500]
gi|388243338|gb|AFK18284.1| hypothetical protein HFX_0558 [Haloferax mediterranei ATCC 33500]
gi|445751005|gb|EMA02442.1| hypothetical protein C439_07665 [Haloferax mediterranei ATCC 33500]
Length = 321
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 156/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C C+ R A + + +C + F E+ + + I + + + IG S
Sbjct: 3 CDKCS-RDAVMHAAYSGAHLCEDHFCASVEKRVRRRIREDNMLPRDATPDNPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + R + ++L L+I EGI GYRD S+ + ++V+
Sbjct: 62 GGKDSVVLTQILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAADLDIHHELVT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N GD+ ++++ + G+ D IPR KP + EKEI YA+ K L
Sbjct: 181 MNFFEGDLKQVAKHYDASIGDFEKRRDAGEFIPRAKPLRDVPEKEIAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + +G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAEMTAREYRGEGRVDLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|433590134|ref|YP_007279630.1| TIGR00269 family protein [Natrinema pellirubrum DSM 15624]
gi|448332460|ref|ZP_21521703.1| PP-loop domain-containing protein [Natrinema pellirubrum DSM 15624]
gi|433304914|gb|AGB30726.1| TIGR00269 family protein [Natrinema pellirubrum DSM 15624]
gi|445627075|gb|ELY80402.1| PP-loop domain-containing protein [Natrinema pellirubrum DSM 15624]
Length = 319
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L E IG S
Sbjct: 3 CTRCDE-EAVMHAAYSGSHLCADHFRESVEKRVRRRVRRDDLVSHDATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + ++L L+I EGI GYRD+S+ + G+ ++VS
Sbjct: 62 GGKDSVVLTQILHE-TFAEDPRIELVGLTIHEGIEGYRDESVDACVELSEELGIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MDE+V+ C +CGVFRR L++ A L D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDEVVEDDPENMAACAYCGVFRRDLLEKYAEELGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSR---CTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ +L E G +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSERGEQEEFVPRAKPLRDVPEKEVAL-YAHINDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E+ I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILAGYEDLASIAADEYSGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|18313243|ref|NP_559910.1| hypothetical protein PAE2295 [Pyrobaculum aerophilum str. IM2]
gi|18160762|gb|AAL64092.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 324
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 11/309 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +R A + + E++C C + E ++ + I +L G+ +AI SGGKDS
Sbjct: 3 LCQRCGKRPAQYYKAVSGEKLCLSCLFRSVERKVVETIRSEKLIVPGDYVAIAVSGGKDS 62
Query: 75 TVLAFVLSELNRRHNY-GLDLFLLSIDEGISG---YRDDSLQTVKRNEIQYGLPLKIVSY 130
VL ++L L R G+ + +I+EG YR V+ ++G+ + +
Sbjct: 63 LVLLYILGRLKERGTLGGVKMEAFTINEGHPYSCFYRMSRRDYVRDLASKFGIEYNVYHF 122
Query: 131 KDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
KD++G T E+ + + + CT GV RR+A++ KIAT HN DD A+T
Sbjct: 123 KDIFGVTAMELSERLAKAGHEVHMCTIDGVLRRRAMNIIGKARGWTKIATAHNLDDEAQT 182
Query: 187 VLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
V+LN+L G+++R S E+ IPR KP KY E+EI YAY+ L EC
Sbjct: 183 VMLNVLMGNLSRFSWYGRYEDAEEKDLIPRIKPLKYIREEEIAL-YAYYHGLPLMELECP 241
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQK 304
Y R + + ++ER P +++ GE ++ P Q C+ CG +S++
Sbjct: 242 YVTTNPRYNLKFTLAEMERDMPTVKYNLVSFGEKLASLLQSRAPPQMKRCKYCGSVSARD 301
Query: 305 WCKACVLLE 313
C+ C L E
Sbjct: 302 ICRVCELFE 310
>gi|435847210|ref|YP_007309460.1| TIGR00269 family protein [Natronococcus occultus SP4]
gi|433673478|gb|AGB37670.1| TIGR00269 family protein [Natronococcus occultus SP4]
Length = 321
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + + ++L L+I EGI GYRD+S++ + G+
Sbjct: 58 IGLSGGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDESVEACVELADELGIRH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY++ +G MD++V+ C +CGVFRR L A L D + TGHN DD A
Sbjct: 117 ELVSYEEEFGIRMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELDADLLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSR---CTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N L GD+A++++ +L E G +PR KP + EKE+ YA+ + L
Sbjct: 177 QTALMNFLEGDVAQMAKHFDASLGPLSERGEQEEFVPRAKPLRDVPEKEVAL-YAHVEDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-------RISTSTKMPE 290
TEC ++ AYRG ++ + DLE P I+ E R + PE
Sbjct: 236 PAHITECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELAGVVADDREDDAEGGPE 295
Query: 291 QGTCERCGYISSQKWCKACVLLEGL 315
C CG ++++ C+ C LLE L
Sbjct: 296 LRECAECGSTTTREVCRKCSLLESL 320
>gi|409723133|ref|ZP_11270464.1| hypothetical protein Hham1_06798 [Halococcus hamelinensis 100A6]
gi|448722501|ref|ZP_21705035.1| hypothetical protein C447_05168 [Halococcus hamelinensis 100A6]
gi|445789226|gb|EMA39915.1| hypothetical protein C447_05168 [Halococcus hamelinensis 100A6]
Length = 320
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 150/319 (47%), Gaps = 21/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C+ R+A L + +C E E + + I + L + E IG S
Sbjct: 3 CTKCD-REAVLHAEYSGAHLCEHHLRESVESRLRRRIRKDGLIGPEASPEDPETWLIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L+E + ++L L+I EGI GYRD+SL + + ++VS
Sbjct: 62 GGKDSVVLTSILAE-TFTEDPRIELVALTIHEGIEGYRDESLDAASELASELNIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y D + MD++ + C +CGVFRR L A DK+ TGHN DD A+T L
Sbjct: 121 YADEFDLEMDDVAETDPENMAPCAYCGVFRRDLLSDYADRFGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N GD+A++++ + G D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFFEGDVAQMAKHFDASLGPFDERTDSTDFVPRAKPLRDVPEKEVAL-YAHLAELPVHM 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS----TKMPEQGTCERC 297
EC +S AYR +E + +E P ++ E + P+ G CERC
Sbjct: 240 AECPHSSEAYRKEIQELLLKMEAQHPGTRHSVMAGYEELAELAARAYRENSPDLGECERC 299
Query: 298 GYISSQKWCKACVLLEGLN 316
G +++ C+ C L E ++
Sbjct: 300 GAATTRDLCRTCQLTEAVH 318
>gi|76803288|ref|YP_331383.1| hypothetical protein NP5322A [Natronomonas pharaonis DSM 2160]
gi|76559153|emb|CAI50752.1| putative tRNA 2-thiolation protein [Natronomonas pharaonis DSM
2160]
Length = 325
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 18/266 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L E + ++L L+I EGI GYRD SL+ + +
Sbjct: 58 IGLSGGKDSVVLTHILDETFAA-DPRVELVALTIHEGIEGYRDASLEACRELTTDLDIEH 116
Query: 126 KIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
+V+Y D YG MD + + +G+ C +CGVFRR AL A DK+ TGHN DD
Sbjct: 117 AVVNYADEYGVEMDNVAEDDPLGMAP-CAYCGVFRRDALSAYADEYGADKLLTGHNLDDE 175
Query: 184 AETVLLNILRGDIARLSRCTLITTGE--------DGPIPRCKPFKYTYEKEIMFTYAYFK 235
A+T ++N+L GDI ++++ + G D +PR KP + EKE+ YA+ K
Sbjct: 176 AQTAMMNLLSGDIKQVAKHFDASLGSFEDRAVDGDPFVPRAKPLRDIPEKEVAL-YAHLK 234
Query: 236 RLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPE---- 290
L EC ++ AYRG ++ + +LE P I+ E R++ +
Sbjct: 235 ELPSHMAECPHASEAYRGEIQDHLHELEDEHPGTRHSIMSGYEELARLAAEAYRDDGDGP 294
Query: 291 QGTCERCGYISSQKWCKACVLLEGLN 316
+G C+RCG + + C+ C L++ ++
Sbjct: 295 RGECDRCGAPTDNEVCRKCELVDAVD 320
>gi|55378723|ref|YP_136573.1| hypothetical protein rrnAC2005 [Haloarcula marismortui ATCC 43049]
gi|448651927|ref|ZP_21680940.1| hypothetical protein C435_07520 [Haloarcula californiae ATCC 33799]
gi|55231448|gb|AAV46867.1| unknown [Haloarcula marismortui ATCC 43049]
gi|445769330|gb|EMA20404.1| hypothetical protein C435_07520 [Haloarcula californiae ATCC 33799]
Length = 331
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYAEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA F+ L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFEDLPAHITECPHAEEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQ-----GTCERCGYISSQKWCKACVLLEGL 315
+ T E G C+ CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENSDTDYGECDNCGAPTARDLCRKCNLLDAL 328
>gi|448637552|ref|ZP_21675790.1| hypothetical protein C436_03436 [Haloarcula sinaiiensis ATCC 33800]
gi|445764399|gb|EMA15554.1| hypothetical protein C436_03436 [Haloarcula sinaiiensis ATCC 33800]
Length = 331
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYAEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA F+ L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFEDLPAHITECPHAEEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQ-----GTCERCGYISSQKWCKACVLLEGL 315
+ T E G C+ CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENNDTDYGECDNCGAPTARDLCRKCNLLDAL 328
>gi|257075864|ref|ZP_05570225.1| ATPase of the PP-loop superamily [Ferroplasma acidarmanus fer1]
Length = 311
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 154/291 (52%), Gaps = 17/291 (5%)
Query: 35 ICRECFYEVFEEEI-----HQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE-LNRRH 88
+C+ F E+ + QV GN+ RI++ SGGKDS+ ++L + L+ R
Sbjct: 21 LCKNHFITYVEKRVKREIREQVDFGNK----KTRISVAISGGKDSSATLYLLHKILSERR 76
Query: 89 NYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLK 148
N L+L ++DEGI GYR L+ ++ G+ ++SYK+ YG+++DEI+K+
Sbjct: 77 N--LELTAFTVDEGIEGYRSTGLEKARKLCENLGIEHNVISYKENYGYSLDEIMKIDKKT 134
Query: 149 NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
+C+ CG RRQ ++R + + D +A G N DD A+++L+N+ +GD+AR +R +
Sbjct: 135 ISCSHCGPMRRQLMNRISEYTESDYVALGINLDDYAQSILMNVAKGDVARYARMAPHSYT 194
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+G +PR P + EKE++ YA +D+ S+ C Y A R R+ I+ LE+ P
Sbjct: 195 REGLVPRILPLRKIPEKEVVL-YAILNGIDFDSSWCPYYSMAQRNSFRDIIEKLEKETPG 253
Query: 269 AILDIIKSGENFRISTSTKMPEQ----GTCERCGYISSQKWCKACVLLEGL 315
I+K + R S + +C+ CG + + C+ C LE +
Sbjct: 254 TKFAIVKFFDETRKSIREHYVNENVKLNSCKICGAPTPGEICEVCSDLEHI 304
>gi|448561006|ref|ZP_21634358.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
prahovense DSM 18310]
gi|448582392|ref|ZP_21645896.1| n-type ATP pyrophosphatase superfamily protein [Haloferax gibbonsii
ATCC 33959]
gi|445721238|gb|ELZ72906.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
prahovense DSM 18310]
gi|445732040|gb|ELZ83623.1| n-type ATP pyrophosphatase superfamily protein [Haloferax gibbonsii
ATCC 33959]
Length = 321
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C R A + + +C + F E+ + + I + + + + IG S
Sbjct: 3 CDKCG-RDAVMHAAYSGAHLCEDHFCASVEKRVRRRIREDNMLPRDASPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + R + ++L L+I EGI GYRD S+ + ++V+
Sbjct: 62 GGKDSVVLTHILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAEDLDIHHELVT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 181 MNFFEGDLKQVAKHFDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + +G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGEGRVDLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|448386010|ref|ZP_21564218.1| PP-loop domain-containing protein [Haloterrigena thermotolerans DSM
11522]
gi|445655908|gb|ELZ08750.1| PP-loop domain-containing protein [Haloterrigena thermotolerans DSM
11522]
Length = 319
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 159/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C++ A + + +C + F E E+ + + + + L E IG S
Sbjct: 3 CTRCDE-DAVMHAAYSGSHLCADHFRESVEKRVRRRVRRDDLVSHDATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + ++L L+I EGI GYRD+S+ + G+ ++VS
Sbjct: 62 GGKDSVVLTQILHE-TFADDPRIELVGLTIHEGIEGYRDESVDACVELSEELGIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MDE+V+ C +CGVFRR L++ A L D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDEVVEDDPENMAACAYCGVFRRDLLEKYAEELGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSR---CTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ +L E G +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSERGEQEEFVPRAKPLRDVPEKEVAL-YAHINDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E+ I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILAGYEDLASIAADEYSGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|410721935|ref|ZP_11361257.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
gi|410598053|gb|EKQ52645.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
Length = 286
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 144/290 (49%), Gaps = 23/290 (7%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
F + E ++ VI L G+R+A+ SGGKDS + +L +L + + +L ++I
Sbjct: 9 FNQELENKVKNVITDYNLIDEGDRVAVALSGGKDSVLTLHILDKLLKENELDFELLAIAI 68
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
+EGISGYR+D ++ + N G+ VS + G+++DE + + C CGVFRR
Sbjct: 69 NEGISGYREDGTESARNNASGLGVEYHEVSLESEMGFSLDE--AAMFFQTACVPCGVFRR 126
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP------- 212
L+R A L VDK+ATGHN DD ++ L++ R D+ R ++ GP
Sbjct: 127 YLLNRTAHHLGVDKLATGHNLDDEVQSFLMSFARADVRRFAKF--------GPKQERIHS 178
Query: 213 --IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAI 270
+PR KP EKE+ +A +D EC Y+ + R + ++ LE RP
Sbjct: 179 KMVPRIKPLWLVPEKEVGM-WAIMNEVDVHLAECPYAYQSLRSRLKAYLNHLEEERPGTK 237
Query: 271 LDIIKSGE-NFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
+ +++ + N +I Q C+ CG SS CKAC + E + L
Sbjct: 238 MKLLEFFQKNLQIDKKPVKIHQ--CQICGEPSSASVCKACEMQEFIKNEL 285
>gi|320100819|ref|YP_004176411.1| PP-loop domain-containing protein [Desulfurococcus mucosus DSM
2162]
gi|319753171|gb|ADV64929.1| PP-loop domain protein [Desulfurococcus mucosus DSM 2162]
Length = 339
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 9/301 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A P + CR F E FE+++ + I ++ E I + SGGKDS
Sbjct: 4 CSVCG-RPAVYVNPVNGKAYCRVHFIEYFEKKVKKTIRKYEMLGEREHIIVAVSGGKDSM 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L +L+R+ G + + +DEGISGYR+ +++ + + + G+ ++ S+K+ G
Sbjct: 63 ALLHFLRKLSRKIP-GWRITAVLVDEGISGYREKTIRNLAKYAEENGVEYRVASFKEYIG 121
Query: 136 WTMDEIV---KVIGLKN-NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
T+DEIV + GL C++CGVFRR L++ A L IAT HN DD+ +T ++N+
Sbjct: 122 ATLDEIVEKGRSRGLPYLPCSYCGVFRRYVLNKAARELGGTVIATAHNMDDVVQTFIMNL 181
Query: 192 LRGDIARLSRCTLIT-TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRL-DYFSTECIYSPN 249
+ ++ R T +T GE G I R KPF EKE YA L + +C Y+
Sbjct: 182 ASNSVDKIYRLTPVTGNGEGGFIRRVKPFYMVLEKESAL-YALLNNLVEPEYVQCPYAHY 240
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R R I +LE P ++ S + CE CG SS + C+AC
Sbjct: 241 NIRFTIRRMINELEDKYPGVKYGLVNSLLSLTRDRQPSSTRGYICEICGEPSSHRVCRAC 300
Query: 310 V 310
+
Sbjct: 301 L 301
>gi|374635762|ref|ZP_09707354.1| PP-loop domain protein [Methanotorris formicicus Mc-S-70]
gi|373561182|gb|EHP87422.1| PP-loop domain protein [Methanotorris formicicus Mc-S-70]
Length = 304
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 156/308 (50%), Gaps = 18/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C KA + + +C+ECF + E ++ + + G ++ K +I +G SGGKDS
Sbjct: 3 CSKCGS-KAIYHQKYSGLYLCKECFIKDVERKVRKSL-GKKIIKNNMKIGVGLSGGKDSV 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+ ++L++ ++ + +DEGI G+R+ + + V +Y + KI+ K+ G
Sbjct: 61 VMTYILNKFFETIPNS-EIVVFFVDEGIKGFREVARKFVIEFCERYDIKYKIIPLKEELG 119
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
T+D+IVK+ KN C+FCGV RR+ L++ A + +A GHN DDI++ +++N
Sbjct: 120 ITLDDIVKIAREKNITLNPCSFCGVMRRKLLNKYALKEGCNYLAIGHNLDDISQAIMMNY 179
Query: 192 LRGDIARLSRCTLITTGEDGPIP----RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+ G I +L R G+D P R +P KY E+E+ YA L Y C YS
Sbjct: 180 IDGSIEKLVR-----LGKDAEHPLLVKRIRPLKYIPEEEVQL-YADLVGLKYQKEPCPYS 233
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
+YR E I LE P I+ E KM E TC+ CG SS CK
Sbjct: 234 SISYRAEISEIIDKLEDSHPGTRHSIVSGFEKLIKHLDIKM-EVKTCKICGEPSSGDICK 292
Query: 308 ACVLLEGL 315
C+ +E L
Sbjct: 293 VCLWMEKL 300
>gi|344212765|ref|YP_004797085.1| PP-loop domain-containing protein [Haloarcula hispanica ATCC 33960]
gi|343784120|gb|AEM58097.1| PP-loop domain protein [Haloarcula hispanica ATCC 33960]
Length = 331
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYVEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYADELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA F+ L TEC ++ AYRG +E + LE P I+ E +
Sbjct: 232 EKEVAL-YARFEDLPAHITECPHAEEAYRGEIQELMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQ-----GTCERCGYISSQKWCKACVLLEGL 315
+ T E G C+ CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGENSDTDYGECDNCGAPTARDLCRKCNLLDAL 328
>gi|448626563|ref|ZP_21671342.1| hypothetical protein C437_00965 [Haloarcula vallismortis ATCC
29715]
gi|445760175|gb|EMA11439.1| hypothetical protein C437_00965 [Haloarcula vallismortis ATCC
29715]
Length = 331
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 139/278 (50%), Gaps = 27/278 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L + + ++L LSI EGI GYRD SL+ +
Sbjct: 54 ETWVIGLSGGKDSVVLTQILHD-TFAEDPRIELVALSIHEGIEGYRDASLEACEELTDDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
G+ VSY + +G MD++V+ G+ C +CGVFRR L + A L DK+ TGHN
Sbjct: 113 GIEHVTVSYAEEFGVQMDDVVEDDPEGMAA-CAYCGVFRRDLLSKYAEELDADKLLTGHN 171
Query: 180 ADDIAETVLLNILRGDIARLSRCTLITTG----------------EDGPIPRCKPFKYTY 223
DD AET L+N L GDI+++++ + G +D IPR KP +
Sbjct: 172 LDDEAETALMNFLEGDISQIAKHFEASLGPFDSSADAPTEQTREAQDHHIPRAKPLRDIP 231
Query: 224 EKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RI 282
EKE+ YA FK L TEC ++ AYRG ++ + LE P I+ E +
Sbjct: 232 EKEVAL-YARFKDLPAHITECPHAEEAYRGEIQDLMLGLEENHPGTRHSIMAGYEKLAAL 290
Query: 283 STSTKMPEQ-----GTCERCGYISSQKWCKACVLLEGL 315
+ T E G C CG +++ C+ C LL+ L
Sbjct: 291 AADTYGGEDSDTDYGECNNCGAPTARDLCRKCNLLDAL 328
>gi|448589728|ref|ZP_21649887.1| n-type ATP pyrophosphatase superfamily protein [Haloferax elongans
ATCC BAA-1513]
gi|445736156|gb|ELZ87704.1| n-type ATP pyrophosphatase superfamily protein [Haloferax elongans
ATCC BAA-1513]
Length = 321
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 153/319 (47%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C R A + + +C + F E+ + + I + + + + IG S
Sbjct: 3 CDKCG-RDAVMHAAYSGAHLCEDHFCASVEKRVRRRIREDDMLPRDASPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E R + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTHILDETFGR-DPRIELIALTIHEGIEGYRDKSVDACVELSDDLDMRHEMVS 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+ A DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVRMDDVVEKDPENMAACAYCGVFRRDLLETFADEYGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G E IPR KP + EKE+ YA+ K L
Sbjct: 181 MNFLEGDVRQVAKHFDASIGSFDKRRDEGDFIPRAKPLRDIPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGDGQVNLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|336253642|ref|YP_004596749.1| hypothetical protein Halxa_2245 [Halopiger xanaduensis SH-6]
gi|335337631|gb|AEH36870.1| protein of unknown function UPF0021 [Halopiger xanaduensis SH-6]
Length = 321
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 158/321 (49%), Gaps = 24/321 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+ +A + + +C + F E E+ + + + + L E IG S
Sbjct: 3 CNRCDD-EAVMHAAYSGAHLCEDHFRESVEKRVRRRVRRDDLVPQDATPDDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTQILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVELTDDLEIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L+R A D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDDVVEDDPENMAACAYCGVFRRDILERYADEYGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+A++++ + G +D IPR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVAQIAKHFDASLGPLSEREDQDDFIPRAKPLRDVPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM---PEQGT----C 294
TEC ++ AYRG ++ + DLE P I+ E +T+ E G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELAQMAATEFNGDNEDGADLQEC 299
Query: 295 ERCGYISSQKWCKACVLLEGL 315
E+CG ++++ C+ C LLE L
Sbjct: 300 EQCGSMTTRNVCRKCSLLETL 320
>gi|448579601|ref|ZP_21644670.1| n-type ATP pyrophosphatase superfamily protein [Haloferax larsenii
JCM 13917]
gi|445723177|gb|ELZ74823.1| n-type ATP pyrophosphatase superfamily protein [Haloferax larsenii
JCM 13917]
Length = 321
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 153/319 (47%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C R A + + +C + F E+ + + I + + + + IG S
Sbjct: 3 CDKCG-RDAVMHAAYSGAHLCEDHFCASVEKRVRRRIREDDMLPRDASPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E R + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTHILDETFGR-DPRIELIALTIHEGIEGYRDKSVDACVELSDDLDMRHEMVS 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+ A DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVRMDDVVEKDPENMAACAYCGVFRRDLLETFADEYGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G E IPR KP + EKE+ YA+ K L
Sbjct: 181 MNFLEGDVRQVAKHFDASIGAFDKRRDEGDFIPRAKPLRDIPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGDGQVNLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|292654746|ref|YP_003534643.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|448293112|ref|ZP_21483356.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|448543451|ref|ZP_21625016.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-646]
gi|448550478|ref|ZP_21628857.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-645]
gi|448559297|ref|ZP_21633468.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-644]
gi|448573125|ref|ZP_21640709.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
lucentense DSM 14919]
gi|448597165|ref|ZP_21654303.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
alexandrinus JCM 10717]
gi|291372586|gb|ADE04813.1| n-type ATP pyrophosphatase superfamily [Haloferax volcanii DS2]
gi|445571612|gb|ELY26159.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|445706588|gb|ELZ58466.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-646]
gi|445711308|gb|ELZ63101.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-644]
gi|445711479|gb|ELZ63271.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-645]
gi|445718890|gb|ELZ70573.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
lucentense DSM 14919]
gi|445741046|gb|ELZ92551.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
alexandrinus JCM 10717]
Length = 321
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C R A + + +C + F E+ + + I + + + + IG S
Sbjct: 3 CDKCG-RDAVMHAAYSGAHLCDDHFCASVEKRVRRRIREDNMLPRDASPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + R + ++L L+I EGI GYRD S+ + ++V+
Sbjct: 62 GGKDSVVLTHILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAEDLDIHHELVT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 181 MNFFEGDLKQVAKHFDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + +G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGEGRVDLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|297619559|ref|YP_003707664.1| PP-loop domain-containing protein [Methanococcus voltae A3]
gi|297378536|gb|ADI36691.1| PP-loop domain protein [Methanococcus voltae A3]
Length = 318
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 14/319 (4%)
Query: 8 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIG 67
SK G+ + N K ++ + + C ECF + + +I + + G + K IA+G
Sbjct: 5 SKSKCGKCGNAFNDDKLYFQKHSGV-KFCEECFIKDTKRKIRKNL-GKDILKNHITIAVG 62
Query: 68 ASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKI 127
SGGKDS V+A+VL+E ++ + + ++EGI G+R+D ++ + ++G+ I
Sbjct: 63 ISGGKDSLVMAYVLNEFFKQIPNS-KIIGIMVNEGIEGFRNDGIEKGIKFCEKFGIEYHI 121
Query: 128 VSYKDLYGWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
++ + G +DEIV + KN C+FCGV RR+ L+R A K D +A GHN DDI
Sbjct: 122 ATFSEYIGANLDEIVNIAKEKNMTMNPCSFCGVIRRKILNRVAIEKKCDYLAIGHNLDDI 181
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
++ V++N + GDI +L+ ++ D + R KP E E+ +A ++DY
Sbjct: 182 SQAVMMNYIEGDIKKLAILGK-SSNSDKFVKRIKPLSKIPENEVKL-FADILKMDYHKAP 239
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT-CERCGYISS 302
C YS +YR + I LE + I+ E R+ ++P T CE+CG S+
Sbjct: 240 CPYSCLSYRSEVSDIIDMLEEKHAGTMYSIVAGYE--RLLEHLEVPGDITLCEKCGEPSA 297
Query: 303 QKWCKACVLLEGLNRGLPK 321
K CK C L+ L GL K
Sbjct: 298 LKICKVCSFLKDL--GLEK 314
>gi|452076976|gb|AGF92948.1| PP-loop domain-containing protein [uncultured organism]
Length = 313
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 11/306 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + R + E +C+E F E FE+++ G++IA+ SGGKDS
Sbjct: 3 CSRCERTPVTYIR-YSGEHLCQEHFKEYFEKKVFTEFRKQVDLGRGKKIAVAVSGGKDSL 61
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V ++ E+ RR + ++ ++IDEGI YR SL+ + + + +VS++++
Sbjct: 62 VALKMVKEIVEERRDS---EVHGITIDEGIECYRPSSLEIAEAVYEKLDIEYDLVSFEEM 118
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G +D+++ + N C+ CGV RR +++ A D +ATG N DD +++VL+N R
Sbjct: 119 FGLPLDDMLDY-DIGNPCSVCGVLRRWIMNKLAKKADADLLATGLNLDDTSQSVLMNFCR 177
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD+ +++R + ++G +PR P + EKE + YA+ + EC Y+ A RG
Sbjct: 178 GDMEKMARLSPHEEVKEGFVPRIAPLRKVPEKE-SYLYAHLSEMKVHEKECPYAETALRG 236
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP---EQGTCERCGYISSQKWCKACV 310
R+ I LE P A I+ S + + + E CERCG + CKAC
Sbjct: 237 LYRDVIGQLEDNTPGARYSILSSFDKVKPLLREEYDNGVELDECERCGEPTMSGRCKACT 296
Query: 311 LLEGLN 316
+++ L
Sbjct: 297 MIKRLE 302
>gi|448329268|ref|ZP_21518569.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
gi|445614455|gb|ELY68131.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
Length = 319
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 157/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+Q +A + + +C + F E E+ + + + + L + IG S
Sbjct: 3 CNRCDQ-EAVMHAAYSGAHLCEDHFRESVEKRVRRRVRRDDLVPHDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL VL + + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTQVLHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVELSEDLDIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A+T L
Sbjct: 121 YEDEFGVRMDDVVEDDPENMAPCAYCGVFRRDLLSEYADELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+NIL GD+ ++++ + G +D +PR KP + EKEI YA+ L
Sbjct: 181 MNILEGDVEQMAKHFDASLGSLSDREEQDEFVPRAKPLRDVPEKEIAL-YAHINDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELADIAAEKYAGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|395646530|ref|ZP_10434390.1| protein of unknown function UPF0021 [Methanofollis liminatans DSM
4140]
gi|395443270|gb|EJG08027.1| protein of unknown function UPF0021 [Methanofollis liminatans DSM
4140]
Length = 303
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +R L +CRE F E + + I ++ +G+ IA+ SGGKDS+
Sbjct: 10 CSKCRREAIIWQRYSGL-HLCREHFIADLEAKAKREIRQRRMIASGDVIAVALSGGKDSS 68
Query: 76 VLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L + L++ +R + L + L++DEGI+GYRD + +R + G+ VS++++
Sbjct: 69 ALLYFLTKTFGKRRD--LSIIALTVDEGIAGYRDTA--AARRIAEECGVTWHCVSFEEIV 124
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T D+IV+ +G +CT+CGV RR L+ A L ++A G N DD A++VL+N LRG
Sbjct: 125 GTTTDQIVQRLGDALSCTYCGVIRRHCLNTAARSLGATRLAMGMNLDDEAQSVLMNALRG 184
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D R+ R + G +PR KPF E+E+ YA + + C Y+ NA R
Sbjct: 185 DAERMVR---TSAPVPGVVPRIKPFAAVPEREVAL-YAILRFGGFTEKGCPYAHNALRAD 240
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
R + D P + GE+ C CG C++C L+
Sbjct: 241 VRTLLNDYAYRHPATKYALKNLGEHLPAICGDTPSRLRVCPECGEPCGDT-CRSCSLV 297
>gi|448445187|ref|ZP_21590242.1| PP-loop domain protein [Halorubrum saccharovorum DSM 1137]
gi|445685493|gb|ELZ37847.1| PP-loop domain protein [Halorubrum saccharovorum DSM 1137]
Length = 326
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD+S+
Sbjct: 55 RWVIGLSGGKDSVALTQILDDVFGK-DPRVEMLALTIHEGIEGYRDESIDATIELAEDLS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
L ++VSY + + MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 LRHEVVSYAEEFDVRMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLIT-------TGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFRI--ST 284
+ L EC +S AYRG + I +LE P A I+ + E +R
Sbjct: 233 RDLPTHMAECPHSSEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGDA 292
Query: 285 STKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
+ P+ G CERCG +S+ C+ C LL+ +
Sbjct: 293 AADSPDLGECERCGSKTSRDVCRKCRLLDSIE 324
>gi|257386246|ref|YP_003176019.1| PP-loop domain-containing protein [Halomicrobium mukohataei DSM
12286]
gi|257168553|gb|ACV46312.1| PP-loop domain protein [Halomicrobium mukohataei DSM 12286]
Length = 332
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 154/315 (48%), Gaps = 36/315 (11%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGASGGKDSTVLAFVLSELNRR 87
+C E F E+ + + I + L + E IG SGGKDS VL +L ++
Sbjct: 20 HMCEEHFCRTVEKRVRRRIREDGLVPRDATPEDPETWVIGLSGGKDSVVLTQILQDVFAE 79
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK--VI 145
+ ++L LSI EGI GYRD+SL G+ ++VSY + + MDE+V+
Sbjct: 80 -DPRIELVALSIHEGIEGYRDESLDASVTLTDDLGIRHEVVSYDEEFDVRMDEVVEDDPE 138
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
G+ C +CGVFRR L + A L DK+ TGHN DD AET L+N+L GD+ ++++
Sbjct: 139 GMAA-CAYCGVFRRDLLSKYADELDADKLLTGHNLDDEAETALMNVLEGDVTQIAQHFDS 197
Query: 206 TTGE-----DGP-----------IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
+ G DGP IPR KP + EKE+ YA F+ L TEC ++
Sbjct: 198 SLGPFDADGDGPADRERPETDQHIPRAKPLRDIPEKEVAL-YARFEELPAHITECPHAEE 256
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKS--------GENFRISTSTKMPEQGTCERCGYIS 301
AYRG ++ + LE P I+ E +R S + + G CE CG +
Sbjct: 257 AYRGEIQDLMLGLEENHPGTRHSIMAGYEKLAALAAEAYR-SEDDRDADFGECENCGAPT 315
Query: 302 SQKWCKACVLLEGLN 316
+ C+ C LL+ L
Sbjct: 316 GRDRCRKCNLLDALE 330
>gi|347524311|ref|YP_004781881.1| PP-loop domain containing protein [Pyrolobus fumarii 1A]
gi|343461193|gb|AEM39629.1| PP-loop domain protein [Pyrolobus fumarii 1A]
Length = 347
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 20/312 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + + R + +C + F E F+ ++ + I +LF +RIA+ SGGKDS
Sbjct: 4 CSVCGRPAIYVMRASGM-ALCEKHFLEYFDRKVRRTIRRYRLFNPHDRIAVAVSGGKDSM 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L L+RR G + L +DEGI GYR+ +++ R ++ + +IV +KD G
Sbjct: 63 SLLHYLLRLSRRAP-GWKITALLVDEGIRGYREYTVERFLRFVEEHSVEYRIVRFKDEVG 121
Query: 136 WTMDEIVKV---IGLKN-NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DEIVK+ GL CT+CGV RR +++ A + +ATGHN DDI +T ++N+
Sbjct: 122 YTLDEIVKIGKERGLPYLPCTYCGVLRRYLMNKAAREMGATVVATGHNLDDIIQTYMMNV 181
Query: 192 LRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
L +++R ++ P + + KPF EKE YA L EC Y+
Sbjct: 182 LSNSWDKIARLGPVSGPGQHPKFVRKVKPFYEVLEKETTI-YAVLNGLYTGFEECPYARL 240
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENF--------RISTSTKMPEQG--TCERCGY 299
R R + +LE P +++S + ++STS + E+G TC CG
Sbjct: 241 GVRWQVRRMLNELEERTPGVKYSLLRSLQTAIEILEKCGKVSTSGE-EEEGPYTCAICGE 299
Query: 300 ISSQKWCKACVL 311
S+ C+AC L
Sbjct: 300 PSAHPICRACQL 311
>gi|134045267|ref|YP_001096753.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
gi|132662892|gb|ABO34538.1| PP-loop domain protein [Methanococcus maripaludis C5]
Length = 311
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 152/287 (52%), Gaps = 15/287 (5%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
CR CF + + ++ + + G + K ++A+G SGGKDS V+A++L+E + +
Sbjct: 22 CRTCFIKETKRKVRKTL-GRDVLKNNIKVAMGLSGGKDSLVMAYLLNEFYKEIPNS-KII 79
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN----NC 151
+ ++EGI GYR D ++ + ++ + KIV +KD G +DEIVK+ KN C
Sbjct: 80 AIMVNEGIEGYRLDGIEAAVKFCEKHDIEYKIVQFKDYLGTNLDEIVKLAKEKNLTMNPC 139
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+FCGV RR+ L+R + K D +A GHN DDIA+ V++N + GD+ +L+ +
Sbjct: 140 SFCGVIRRKILNRVSIEEKCDFLAIGHNLDDIAQAVMMNYIEGDVKKLA---FLGKSLKH 196
Query: 212 P--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
P + R KP + E E++ A L Y + C YS ++R E LE+ P
Sbjct: 197 PKFVKRIKPLEKIPEDEVLLL-ADMLELTYHKSPCPYSCLSFRSEVSEITDTLEKNHPGT 255
Query: 270 ILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKACVLLEGL 315
I++ E R+ ++P G C+ CG +S+ + CK C L+ L
Sbjct: 256 KYSIVRGYE--RLLEHIELPGYTGECKICGDLSATEVCKVCSYLKNL 300
>gi|119872527|ref|YP_930534.1| PP-loop domain-containing protein [Pyrobaculum islandicum DSM 4184]
gi|119673935|gb|ABL88191.1| PP-loop domain protein [Pyrobaculum islandicum DSM 4184]
Length = 330
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 12/310 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C +R A R + E++C C + E+++ + I +L K G+ +A+ SGGKDS
Sbjct: 3 ICQRCGKRPAQYLRVVSGERLCLRCLFNSVEDKVLKTIRRYRLIKPGDYVAVAISGGKDS 62
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSY 130
VL ++L + L R + + +I+EG YR + VK ++G+ + +
Sbjct: 63 LVLLYILGKFLQRNLLKDVKIEAFTINEGHPYSCFYRMSKREYVKELASKFGIEYNVYHF 122
Query: 131 KDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
KD++G T E+ + + + + CT GV RR+A++ KIAT HN DD A+T
Sbjct: 123 KDIFGVTAIELAESLSKRGHEVHMCTIDGVLRRRAMNIIGRRRGWTKIATAHNLDDEAQT 182
Query: 187 VLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
VL+N+L G+++RLS L E+ IPR KP KY E+EI YAY+ + EC
Sbjct: 183 VLMNVLMGNLSRLSWYGLYEDAEEKDLIPRIKPLKYIREEEIAI-YAYYHGIPLMELECP 241
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQ 303
Y R + + LE+ P +++ GE T M ++ C CG S++
Sbjct: 242 YVVTNPRYNLKFTLATLEKEMPSVKYNLVSFGEKLSAILRTSMQQESLRRCRYCGATSAR 301
Query: 304 KWCKACVLLE 313
C+ C L E
Sbjct: 302 DVCRVCELFE 311
>gi|219851846|ref|YP_002466278.1| PP-loop domain-containing protein [Methanosphaerula palustris
E1-9c]
gi|219546105|gb|ACL16555.1| PP-loop domain protein [Methanosphaerula palustris E1-9c]
Length = 304
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 12/305 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C CN+ R +C E E + ++ L ERIA+ SGGKDST
Sbjct: 4 CDRCNEHAVYFSRGDG-AHLCGAHLMEKVEAKTAGMLASYTLAD-NERIAVALSGGKDST 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL ++++ L + L +++DEGI YRD++L +R + G+ IVS++DL+G
Sbjct: 62 VLLWLMNMLLGKRAAD-RLVAITVDEGIRDYRDETLAAARRLTHRLGIRHIIVSFQDLFG 120
Query: 136 WTMDEIVKVIGLKNN-CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+D ++ IG + C+ CGV+RRQAL + A +ATGH DD A++VL+N LRG
Sbjct: 121 ADLDSLL--IGNRERACSVCGVYRRQALQQTAVEAGAGVLATGHCLDDEAQSVLMNYLRG 178
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D+ R++ TG IPR KP EKE++ Y L EC Y+ +A R
Sbjct: 179 DLTRIAGTLPEGTGY---IPRIKPLGRVSEKEVV-VYGMVASLLSPLPECPYTAHALRAE 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVLL 312
R + LE P +L I++ + + + S +P C+RCG S C+ C +
Sbjct: 235 VRRALGVLEYRFPGTMLRIVEGEADLKRTVSGMVPPSALSKCDRCGAPCSGTICQRCKIE 294
Query: 313 EGLNR 317
+ L+R
Sbjct: 295 DLLDR 299
>gi|289580657|ref|YP_003479123.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
gi|448284324|ref|ZP_21475584.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
gi|289530210|gb|ADD04561.1| PP-loop domain protein [Natrialba magadii ATCC 43099]
gi|445570659|gb|ELY25218.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
Length = 319
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 159/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPKDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + + ++L L+I EGI GYRD SL + ++VS
Sbjct: 62 GGKDSVVLTQILHETFAK-DPRIELVGLTIHEGIEGYRDKSLDACVELSDDLDIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V+ C +CGVFRR L R A L D + TGHN DD A+T L
Sbjct: 121 YEDEFGIQMDDVVEDDPENMAACAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ++ +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREQQEEFVPRAKPLRDVPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGT----CER 296
TEC ++ AYRG ++ + +LE P I+ E TS + E G C
Sbjct: 240 TECPHASEAYRGEIQQLLYELEENHPGTRHSILSGYEELAGITSDEFSGENGADLQDCTE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLEAL 318
>gi|159041820|ref|YP_001541072.1| PP-loop domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157920655|gb|ABW02082.1| PP-loop domain protein [Caldivirga maquilingensis IC-167]
Length = 337
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 18/315 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C R+A + + E++C C + E+ + + + +L +G+R+ I SGGKDS
Sbjct: 4 LCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGGKDS 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLL--SIDEGISGY----RDDSLQTVKRNEIQYGLPLKIV 128
VL ++L +L R D L+ SIDEG Y R +S+ V + ++ + K+
Sbjct: 64 LVLMYLLGKLRRLGRIPKDTVLIAFSIDEG-QPYSCVRRANSMDYVAKLTEEFNIEYKVF 122
Query: 129 SYKDLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+ +L+G T +I + + K + CT CGV RR+A++ +L + KIATGHN DD A
Sbjct: 123 RFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAMNIVGRMLNLTKIATGHNLDDEA 182
Query: 185 ETVLLNILRGDIARLSRCTLITT---GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+TVLLN+ D+ R + + E+ IPR KP ++ E+E+ YAY+ + +
Sbjct: 183 QTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVAL-YAYYHGIPLMT 241
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---GTCERCG 298
EC + N R + + ER P ++ G+ + + Q C CG
Sbjct: 242 IECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHCG 301
Query: 299 YISSQKWCKACVLLE 313
+ +S C+ C LL+
Sbjct: 302 FPTSGSVCRVCELLK 316
>gi|433419681|ref|ZP_20405320.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp.
BAB2207]
gi|432199380|gb|ELK55561.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp.
BAB2207]
Length = 321
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C C R A + + +C + F E+ + + I + + + + IG S
Sbjct: 3 CDKCG-RDAVMHAAYSGAHLCDDHFCASVEKRVRRRIREDNMLPRDASPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + R + ++L L+I EGI GYRD S+ + ++ +
Sbjct: 62 GGKDSVVLTHILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAEDLDIHHELAT 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A+T L
Sbjct: 121 YEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 181 MNFFEGDLKQVAKHFDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG-----TCER 296
TEC +S AYRG ++ + LE P I+ E T+ + +G CER
Sbjct: 240 TECPHSSEAYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGEGRVDLNDCER 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++ C+ C L+E +
Sbjct: 300 CGSKTAGDVCRKCRLIESI 318
>gi|254168734|ref|ZP_04875576.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289596819|ref|YP_003483515.1| PP-loop domain protein [Aciduliprofundum boonei T469]
gi|197622360|gb|EDY34933.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289534606|gb|ADD08953.1| PP-loop domain protein [Aciduliprofundum boonei T469]
Length = 308
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 7/307 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A R ++C+E F E + ++ + I FK G++I I SGGKDS
Sbjct: 3 CTKCEKEAVAEIRYAGT-RLCKEHFLEFIDRKVKREIREQAHFKKGDKILIAVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ + + ++ + L+L +++DEGI +R + + + G+ +++++K+ G
Sbjct: 62 LTMYQMHKIFGKWR-DLELVAVTVDEGIGDFRRNCAKVANIYARELGIEHEVITFKEYLG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T D++ +V CT+CGVFRR+ L+ A + + + G N DDIA+++++NI RGD
Sbjct: 121 ITTDDVARVDKELKPCTYCGVFRRKVLNMYAKEIGANYLILGLNLDDIAQSIIMNITRGD 180
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
ARL+R +G IPR P + E E+ Y + Y+ C Y+ A R
Sbjct: 181 TARLARLAPHKKIREGFIPRIIPLRRVRENEVRL-YMNLANIPYYPKRCPYAHLAVRDVY 239
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACVL--- 311
REF+ LE P I+ + + K Q C+ CG ++ CKAC L
Sbjct: 240 REFLNSLEERDPAVKFAILNFFDEIKEYIEEKYSAQLHPCKICGEPTTGDICKACELKLR 299
Query: 312 LEGLNRG 318
E +++G
Sbjct: 300 YESMSKG 306
>gi|119719832|ref|YP_920327.1| PP-loop domain-containing protein [Thermofilum pendens Hrk 5]
gi|119524952|gb|ABL78324.1| PP-loop domain protein [Thermofilum pendens Hrk 5]
Length = 328
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 10/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R+A++ + +C E F E FE + + +L + GER+A+ SGGKDS
Sbjct: 4 CYVCG-RRASVYVSYLGDYLCSEHFAEYFERRFLEAVRFYKLVERGERVAVAVSGGKDSL 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
++ S G+++F +++DEGI+GYR+ L+ ++ + G+ + + S+K+ +G
Sbjct: 63 TTLYLFSRFA--GELGVEVFGVAVDEGIAGYREYKLEALRSLAGRLGVEIIVGSFKEYFG 120
Query: 136 WTMDEIVKVI---GLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DE VK + G K C+ CGV RR ++ A DK+ATGHN DD + ++N
Sbjct: 121 FTLDEAVKALREKGFKVKPCSVCGVLRRYVMNHAAREAGADKLATGHNLDDEVQVFVMNA 180
Query: 192 LRGDIARLSRCTLITT-GEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
L+ + + R +++ E+G +PR KP + EKE++ Y + + EC Y
Sbjct: 181 LKNHVEGILREGIVSERAEEGDLVPRIKPLYFIPEKEVL-AYTLIRNIYTPFVECPYIVY 239
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
A R R ++ ++E P ++ E R + + C CG SS+ CK C
Sbjct: 240 ALRHPIRHWVNEVEDSSPGFKYRVLAVKELARKTARKPSRKPSRCAVCGEPSSRPLCKTC 299
Query: 310 V 310
+
Sbjct: 300 L 300
>gi|448605541|ref|ZP_21658167.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
sulfurifontis ATCC BAA-897]
gi|445741567|gb|ELZ93066.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
sulfurifontis ATCC BAA-897]
Length = 321
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 136/263 (51%), Gaps = 15/263 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + R + ++L L+I EGI GYRD S+ +
Sbjct: 58 IGLSGGKDSVVLTHILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAEDLDIHH 116
Query: 126 KIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A
Sbjct: 117 ELVSYEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADDLGADKLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 177 QTALMNFFEGDLKQVAKHFDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG----- 292
TEC +S AYR ++ + LE P I+ E T+ + +G
Sbjct: 236 PAHITECPHSSEAYRAEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGEGRVDLN 295
Query: 293 TCERCGYISSQKWCKACVLLEGL 315
CERCG ++ C+ C L+E +
Sbjct: 296 DCERCGSKTAGDVCRKCRLIESI 318
>gi|397773902|ref|YP_006541448.1| PP-loop domain protein [Natrinema sp. J7-2]
gi|397682995|gb|AFO57372.1| PP-loop domain protein [Natrinema sp. J7-2]
Length = 328
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 12 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPHDATPETPQTWVIGLS 70
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S++ + ++VS
Sbjct: 71 GGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVEACVELCEDLEIRHELVS 129
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V+ C +CGVFRR L + A L+ D + TGHN DD A+T L
Sbjct: 130 YEDEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTAL 189
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N+L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 190 MNVLEGDVEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVAL-YAHVNDLPAHI 248
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC ++ AYRG ++ + DLE P I+ E + K E C
Sbjct: 249 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGAELQDCAE 308
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 309 CGSTTTRDVCRKCSLLEAL 327
>gi|448300191|ref|ZP_21490194.1| PP-loop domain protein [Natronorubrum tibetense GA33]
gi|445586198|gb|ELY40481.1| PP-loop domain protein [Natronorubrum tibetense GA33]
Length = 319
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI------AIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L G IG S
Sbjct: 3 CNRCDE-EAIMHAAYSGAHLCTDHFRESVEKRVRRRVRRDDLVPHGVTPEDPLTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L E + ++L L+I EGI GYRD SL+ + G+ ++VS
Sbjct: 62 GGKDSVVLTEILHE-TFAEDPRIELVGLTIHEGIEGYRDKSLEACVELTDELGIHHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A+T +
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSNYADELEADLLLTGHNLDDEAQTAM 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDVPEKEVAL-YAHVNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC +S AYRG ++ + LE P I+ E I + + G C
Sbjct: 240 TECPHSSEAYRGEIQQLLYGLEENHPGTRHSILSGYEELANIMSDEFSGDDGANLQDCAE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|429192440|ref|YP_007178118.1| hypothetical protein Natgr_2505 [Natronobacterium gregoryi SP2]
gi|448325848|ref|ZP_21515228.1| PP-loop domain-containing protein [Natronobacterium gregoryi SP2]
gi|429136658|gb|AFZ73669.1| TIGR00269 family protein [Natronobacterium gregoryi SP2]
gi|445614182|gb|ELY67862.1| PP-loop domain-containing protein [Natronobacterium gregoryi SP2]
Length = 320
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C + +A + + + +C + F E E+ + + I + L E IG S
Sbjct: 3 CNRCGE-EAVMHAAYSGQHLCADHFRESVEKRVRRRIRRDDLVPQDATPENPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ + + ++V
Sbjct: 62 GGKDSVVLTKILHD-TFAEDPRIELVGLTIHEGIDGYRDKSVDACVALTERLSIHHEVVG 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L R A L+ D + TGHN DD A+T L
Sbjct: 121 YEEEFGIRMDDVVEDDPENMAACAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVAL-YAHVEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + +LE P II E I+T + G C +
Sbjct: 240 TECPHASEAYRGEIQQLLYELEENHPGTRHSIIAGYEELASIATEEYSGDDGVDLQECTQ 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREICRKCSLLESL 318
>gi|330834210|ref|YP_004408938.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329566349|gb|AEB94454.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 316
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 28/315 (8%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + + + +++C+ECF + + L A +I I SGGKDS
Sbjct: 2 MCDLCGVREAEIYQAHSRKRLCKECFLNDILARVEKEAKKQNLLNAN-KILIAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA LS++ + + +I EGI GY R+D ++ + + G+ L S++
Sbjct: 61 LVLADTLSKIVNPNR----IVAFNIVEGIKGYNREDQVRELSNYLKELGIDLISTSFEKS 116
Query: 134 YGWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G+T+D++VK + CTFCG FRR+ ++ + D ++TGHN DD +T+++
Sbjct: 117 VGYTLDQMVKSSSQRGLNVAACTFCGGFRRKLINGAGREVNADFVSTGHNLDDEVQTIII 176
Query: 190 NILRGDIARLSRCTLITTGEDGP------IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
N+LRGD+ +L R G+ P + R KP + YE E YAYFK + E
Sbjct: 177 NLLRGDVKKLLR-----IGDSQPKLSEKFVMRVKPLRKVYEWETTM-YAYFKGFHFQEVE 230
Query: 244 CIY--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGTCERCGY 299
C Y + R R+ + LE P A+L I+++ ++ I TK+ +C+ CG
Sbjct: 231 CPYISAKPTMRAKVRDLLYALEERSPGALLQILENFDSLAESIRKGTKLGSLPSCKLCGE 290
Query: 300 ISS--QKWCKACVLL 312
+S +++CK C LL
Sbjct: 291 PTSFGREYCKNCELL 305
>gi|154151660|ref|YP_001405278.1| PP-loop domain-containing protein [Methanoregula boonei 6A8]
gi|154000212|gb|ABS56635.1| PP-loop domain protein [Methanoregula boonei 6A8]
Length = 315
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 150/309 (48%), Gaps = 15/309 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A + +P +C + E I L G+RIA+G SGGKDST
Sbjct: 13 CAICGE-PAVICQPAQKRHLCGTHLIQDLEARAAATIREGDLIHPGDRIAVGLSGGKDST 71
Query: 76 VLAFVLSELNRRHNYGLD---LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
L +LS L GL + +++DEGI+GYR D++++ + + G+ ++VS++D
Sbjct: 72 ALLVILSRLL----PGLPEVKIVAITVDEGIAGYRSDTIKSAEALTRRLGVEHRMVSFRD 127
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
L G +D ++ G K CT CG+ R++AL A IATGHN DD A++VL+N L
Sbjct: 128 LIGSDLDTLLLGRG-KQACTICGILRKKALMDAARDSGATVIATGHNLDDEAQSVLMNAL 186
Query: 193 RGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
RGD+ RL R G P +PR KP EKE + Y + + L EC Y+ A
Sbjct: 187 RGDLPRLVRDA--GAGRSAPFLPRIKPLAAIAEKE-IAAYLFVQDLFPVLPECPYTRYAL 243
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
R R + LE P + +S + R + + M C CG S C+ C
Sbjct: 244 RADVRSLLAGLESRYPGTTASLGESKKKIRGYCAGTPVMTPLNRCGECGDPCSGDLCQVC 303
Query: 310 VLLEGLNRG 318
L L RG
Sbjct: 304 RLRHSLERG 312
>gi|448341439|ref|ZP_21530399.1| PP-loop domain protein [Natrinema gari JCM 14663]
gi|445627941|gb|ELY81254.1| PP-loop domain protein [Natrinema gari JCM 14663]
Length = 319
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPHYATPETPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S++ + ++VS
Sbjct: 62 GGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVEACVELCEDLEIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y+D +G MD++V+ C +CGVFRR L + A L+ D + TGHN DD A+T L
Sbjct: 121 YEDEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N+L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNVLEGDVEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVAL-YAHVNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC ++ AYRG ++ + DLE P I+ E + K E C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGAELQDCAE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 300 CGSTTTRDVCRKCSLLEAL 318
>gi|256810699|ref|YP_003128068.1| PP-loop domain-containing protein [Methanocaldococcus fervens AG86]
gi|256793899|gb|ACV24568.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
Length = 303
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C+ECF + E+ +V+ G ++ + +I IG SGGKDS +A++L +L H +L
Sbjct: 20 LCKECFKKDVEKRAKKVL-GKEVIRNDVKIGIGISGGKDSLAMAYILKKL-FNHIPNAEL 77
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK-----VIGLKN 149
+DEGI G+R+ + + +K + GL LK++ ++D G T+DEIVK + +
Sbjct: 78 ICFFVDEGIEGFREKAKEYIKDFCKEQGLELKVIKFRDEIGHTLDEIVKNNYLTKLNIGK 137
Query: 150 NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGE 209
C+FCGV RR L++ A D +A GHN DD +T+L+N + G+I + + GE
Sbjct: 138 PCSFCGVVRRYLLNKYALKEGCDYLAIGHNLDDFCQTILMNYVEGNIKNIIQFGKEFEGE 197
Query: 210 DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
G + R KP K E E+ YA + Y C YS +YR ++ I+ LE +P
Sbjct: 198 -GFVKRIKPLKLIPEDEVRL-YADIVNIKYQKEPCPYSSLSYRHRMKKVIEVLEEDKPGV 255
Query: 270 ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
I++ E K E C+ CGY S CK C L
Sbjct: 256 KFSILRGYEKLLKYIDVK-EEVKKCKICGYPCSGDICKVCSWL 297
>gi|289192268|ref|YP_003458209.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
gi|288938718|gb|ADC69473.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
Length = 311
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 14/304 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS N+ A + + +C++CF + E +V+ G + + +I IG SGGKDS
Sbjct: 2 LCSCGNE--AFYYQKYSNRHLCKDCFKKDIERRAKKVL-GKDIIRNNVKIGIGVSGGKDS 58
Query: 75 TVLAFVLSELNRR-HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V+A++L +L N L F +DEGI G+R+ + + VK ++ L LKI+ ++D
Sbjct: 59 LVMAYILKKLFENIPNSKLICFF--VDEGIKGFREKAKEYVKEFCEEHNLDLKIIKFEDE 116
Query: 134 YGWTMDEIVK-----VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+T+DEI+K + + C+FCGV RR L++ A D +A GHN DD +T+L
Sbjct: 117 IGYTLDEIIKNNYLSKLNIGKPCSFCGVVRRYLLNKYALKEGCDYLAIGHNLDDFCQTIL 176
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
+N + G+I + + GE G + R KP K E E+ YA + Y C YS
Sbjct: 177 MNYIEGNIKNIVQFGKEFEGE-GFVKRIKPLKLIPEDEVRL-YAEINNIRYQREPCPYSS 234
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
+YR ++ I+ LE+ +P I++ E + K E C+ CG+ S CK
Sbjct: 235 LSYRHRMKKIIEILEKEKPGVKFSILRGYEKLLKYLNVK-EEIRRCKICGFPCSGNLCKV 293
Query: 309 CVLL 312
C L
Sbjct: 294 CSWL 297
>gi|383621565|ref|ZP_09947971.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
gi|448702196|ref|ZP_21699850.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
gi|445777566|gb|EMA28527.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
Length = 319
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 159/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + + +C + F E E+ + + + + L + E IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGQHLCADHFRESVEKRVRRRVRRDDLVPQDATPEDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ G+ ++VS
Sbjct: 62 GGKDSVVLTKILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVDLSRDLGIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L R A L+ D + TGHN DD A+T L
Sbjct: 121 YAEEFGIEMDDVVEDDPENMAACAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ED +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSEREDQEEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR-ISTSTKMPEQGT----CER 296
TEC +S AYR ++ + DLE P I+ E I+ + G C
Sbjct: 240 TECPHSSEAYRAEIQQLLYDLEENHPGTRHSILSGYEELAGIAAERYGGDDGADLRECSE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLESL 318
>gi|390938185|ref|YP_006401923.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191292|gb|AFL66348.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 334
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A P + CR F E FE+++ + I ++ E I +G SGGKDS
Sbjct: 4 CSICG-RPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVGVSGGKDSI 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTV----KRNEIQYGLPLKIVSYK 131
L VL +L+R+ G + + ++EGI GYR+ +++ + +NE+ Y IVS+K
Sbjct: 63 ALLHVLHKLSRKMP-GWRVTAVLVNEGIKGYREKTVENLVKYAAKNEVGY----HIVSFK 117
Query: 132 DLYGWTMDEIV---KVIGLKN-NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
+ G ++DEIV + GL C++CGVFRR L++ A L IAT HN DD+ +T
Sbjct: 118 EYIGASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTF 177
Query: 188 LLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
L+NI+ + ++ + T + + E+G I R KPF EKE ++ +C Y
Sbjct: 178 LMNIVSNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPY 237
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQK 304
+ R R+ I +LE P ++ S + T+ + ++ C+ CG SS
Sbjct: 238 AEYNIRFTIRKMINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHP 297
Query: 305 WCKACV 310
C+AC+
Sbjct: 298 VCRACL 303
>gi|254168818|ref|ZP_04875659.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|197622255|gb|EDY34829.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
Length = 308
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 152/307 (49%), Gaps = 7/307 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A R ++C+E F E + ++ + I FK G++I I SGGKDS
Sbjct: 3 CTKCEKEAVAEIRYAG-TRLCKEHFLEFIDRKVKREIREQAHFKKGDKILIAVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ + + ++ + L+L +++DEGI +R + + G+ +++++K+ G
Sbjct: 62 LTLYQMHKIFGKWR-DLELVAVTVDEGIGDFRKSCAKVANTYAKKLGIKHEVITFKEYLG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T D++ +V CT+CGVFRR+ L+ + + + + G N DDIA+++++NI RGD
Sbjct: 121 ITTDDVARVDKELKPCTYCGVFRRKVLNMYSKEIGANYLILGLNLDDIAQSIIMNITRGD 180
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
ARL+R +G IPR P + E E+ Y + Y+ C Y+ A R
Sbjct: 181 TARLARLAPHKKIREGFIPRIIPLRRVREDEVRL-YMNLANIPYYPKRCPYAHLAVRDVY 239
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACVL--- 311
REF+ LE P I+ + + K Q C+ CG ++ CKAC L
Sbjct: 240 REFLNSLEERDPAVKFAILNFFDEIKEYIEEKYSAQLHPCKICGEPTTGDICKACELKLR 299
Query: 312 LEGLNRG 318
E +++G
Sbjct: 300 YESMSKG 306
>gi|374634054|ref|ZP_09706419.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
gi|373523842|gb|EHP68762.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
Length = 315
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 165/321 (51%), Gaps = 26/321 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R A + + T ++C CF E + + L A ++I + SGGKDS
Sbjct: 3 CDICGSRNARVYQKHTGRRLCDSCFLENVRNRVRLEAIRLGLGNA-KKILLAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLD---LFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYK 131
VLA +S LD L +I EGI GY R+ ++ ++R G+ L S+K
Sbjct: 62 VLADTISSF-------LDPGRLVAFNIMEGIEGYNRESQVKELERYLRDLGVELIGTSFK 114
Query: 132 DLYGWTMDEIVKVI---GLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETV 187
D G+++DEIV+ GLK + CTFCG FRR+ +++ + D +ATGHN DD +T+
Sbjct: 115 DGVGYSLDEIVRASQGRGLKISACTFCGGFRRKLINQAGRDVGADLVATGHNLDDEVQTI 174
Query: 188 LLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
++N+LRGD+ +L R L D + R KP + YE E YAYFK + TEC Y
Sbjct: 175 IINLLRGDVKKLVRVGDLPVKLSDKFVTRVKPLRKIYEWETTM-YAYFKGFKFQETECPY 233
Query: 247 --SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGTCERCGYISS 302
S R R+ + +E P ++L I+++ + + S+ + E TC CG +S
Sbjct: 234 ISSRPTMRSKVRDLMYAIEDESPGSLLRILETYDKIAETVRRSSSLGELPTCRICGEPTS 293
Query: 303 --QKWCKACVLLEGLNRGLPK 321
++ CK C LL ++ GL K
Sbjct: 294 FGREICKNCELL--ISSGLLK 312
>gi|14324659|dbj|BAB59586.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 312
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 151/305 (49%), Gaps = 8/305 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE-RIAIGASGGKDS 74
CS C+ + L +CR+ F E+ E + + I F + I++ SGGKDS
Sbjct: 6 CSKCSAEAIYYAKYNGL-YLCRDHFNEMIEGRVKKEIRKQVEFHGDDVTISVALSGGKDS 64
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
+V F+L + L R N + F ++DEGI GYR L++ KR G+ + +S+ D
Sbjct: 65 SVTLFLLHKILGNRKNMKIKAF--TVDEGIDGYRPSGLESAKRLCTSLGIDHETISFYDS 122
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG T+D IVK +K C +CG RR+ ++ A D +A G N DD ++++L+N+ +
Sbjct: 123 YGLTLDSIVKTNPVKIPCAYCGPLRRKLINEMADKQDADYVALGLNLDDYSQSILMNVAK 182
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD R R + T + G + R P + EKE++ YA + + S+ C Y A R
Sbjct: 183 GDFDRFIRMSPQTDRKVGLVRRIAPLRTILEKEVVL-YAVTNDIPFDSSWCPYYSRAQRN 241
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RE + L P I+K + R I+T + + C+ CG + + C AC
Sbjct: 242 VFREVVNKLSEENPSTKFAILKFFDRVRENITTGHEEVKLKRCKICGAPTERDVCTACSS 301
Query: 312 LEGLN 316
L+ +N
Sbjct: 302 LQEVN 306
>gi|448624252|ref|ZP_21670325.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
denitrificans ATCC 35960]
gi|445750219|gb|EMA01658.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
denitrificans ATCC 35960]
Length = 321
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 15/263 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + R + ++L L+I EGI GYRD S+ +
Sbjct: 58 IGLSGGKDSVVLTHILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELAEDLDIHH 116
Query: 126 KIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++V+Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A
Sbjct: 117 ELVTYEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADDLGADKLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 177 QTALMNFFEGDLKQVAKHFDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG----- 292
TEC +S AYR ++ + LE P I+ E T+ + +G
Sbjct: 236 PAHITECPHSSEAYRAEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGEGRVDLN 295
Query: 293 TCERCGYISSQKWCKACVLLEGL 315
CERCG ++ C+ C L+E +
Sbjct: 296 DCERCGSKTAGDVCRKCRLIESI 318
>gi|13541276|ref|NP_110964.1| ATPase [Thermoplasma volcanium GSS1]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 151/305 (49%), Gaps = 8/305 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE-RIAIGASGGKDS 74
CS C+ + L +CR+ F E+ E + + I F + I++ SGGKDS
Sbjct: 3 CSKCSAEAIYYAKYNGL-YLCRDHFNEMIEGRVKKEIRKQVEFHGDDVTISVALSGGKDS 61
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
+V F+L + L R N + F ++DEGI GYR L++ KR G+ + +S+ D
Sbjct: 62 SVTLFLLHKILGNRKNMKIKAF--TVDEGIDGYRPSGLESAKRLCTSLGIDHETISFYDS 119
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG T+D IVK +K C +CG RR+ ++ A D +A G N DD ++++L+N+ +
Sbjct: 120 YGLTLDSIVKTNPVKIPCAYCGPLRRKLINEMADKQDADYVALGLNLDDYSQSILMNVAK 179
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD R R + T + G + R P + EKE++ YA + + S+ C Y A R
Sbjct: 180 GDFDRFIRMSPQTDRKVGLVRRIAPLRTILEKEVVL-YAVTNDIPFDSSWCPYYSRAQRN 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKACVL 311
RE + L P I+K + R I+T + + C+ CG + + C AC
Sbjct: 239 VFREVVNKLSEENPSTKFAILKFFDRVRENITTGHEEVKLKRCKICGAPTERDVCTACSS 298
Query: 312 LEGLN 316
L+ +N
Sbjct: 299 LQEVN 303
>gi|146304686|ref|YP_001192002.1| PP-loop domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145702936|gb|ABP96078.1| PP-loop domain protein [Metallosphaera sedula DSM 5348]
Length = 315
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 162/321 (50%), Gaps = 42/321 (13%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG----ERIAIGASGG 71
C C R+A + +P T +++CR+CF +E V + K G R+ I SGG
Sbjct: 3 CDNCGVREAEVFQPHTGKRLCRDCFLSDVQER-----VAREAKKLGVTSVSRVLIAVSGG 57
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSY 130
KDS VLA LS++ L +I EGI GY R+D ++ + G+ L S+
Sbjct: 58 KDSLVLADTLSKVMDPSK----LIAFNIVEGIQGYNREDQVKELYHYLRDLGIELISTSF 113
Query: 131 KDLYGWTMDEIV---KVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
K G+++DE+V + GL CTFCG FRR+ +++ +K D +ATGHN DD A+T
Sbjct: 114 KTSVGYSLDEMVSSSRARGLNIAACTFCGGFRRKLINQAGRDVKADLVATGHNLDDEAQT 173
Query: 187 VLLNILRGDIARLSRCTLITTGE------DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
+++N+LRGD+ +L R GE D + R KP + YE E YA+ K +
Sbjct: 174 IIINLLRGDVRKLMR-----VGESPLKLSDKFVMRVKPLRKIYEWETTM-YAFLKGFKFQ 227
Query: 241 STECIY--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-----RISTSTKMPEQGT 293
EC Y + R R+ + LE P +L ++ ENF + +K+ T
Sbjct: 228 EVECPYISARPTMRAKVRDLMYALEEKSPGFLLRLV---ENFDRIGEEVRRESKLTTLPT 284
Query: 294 CERCGYISS--QKWCKACVLL 312
C+ CG +S +++CK C LL
Sbjct: 285 CKMCGEPTSFGREYCKNCELL 305
>gi|448613553|ref|ZP_21663433.1| hypothetical protein C440_16629 [Haloferax mucosum ATCC BAA-1512]
gi|445740450|gb|ELZ91956.1| hypothetical protein C440_16629 [Haloferax mucosum ATCC BAA-1512]
Length = 321
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + R + ++L L+I EGI GYRD S+ +
Sbjct: 58 IGLSGGKDSVVLTQILDDTFGR-DPRIELVALTIHEGIEGYRDKSVDACVELASDLDIHH 116
Query: 126 KIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++V+Y+D +G MD++V K C +CGVFRR L+R A L DK+ TGHN DD A
Sbjct: 117 ELVTYEDEFGVQMDDVVEKDPENMAACAYCGVFRRDLLERFADELGADKLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-----DGP--IPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N GD+ ++++ + G+ D IPR KP + EKE+ YA+ K L
Sbjct: 177 QTALMNFFEGDLKQVAKHYDASIGDFEKRRDAGEFIPRAKPLRDVPEKEVAL-YAHLKDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG----- 292
TEC +S AYR ++ + LE P I+ E T+ + G
Sbjct: 236 PAHITECPHSSEAYRAEVQQLLLKLEENHPGTRHSIMAGYEELAEITAREYRGDGKADLN 295
Query: 293 TCERCGYISSQKWCKACVLLEGL 315
CERCG ++ C+ C L+E +
Sbjct: 296 DCERCGSKTAGDVCRKCRLIESI 318
>gi|432329346|ref|YP_007247490.1| TIGR00269 family protein [Aciduliprofundum sp. MAR08-339]
gi|432136055|gb|AGB05324.1| TIGR00269 family protein [Aciduliprofundum sp. MAR08-339]
Length = 310
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 8/299 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN + A + +C++ F + + ++ + I FK +RI I SGGKDS
Sbjct: 3 CSKCN-KDAITEIRYAGTHLCKDHFLQFIDRKVKREIREQAHFKKDDRILIAVSGGKDSM 61
Query: 76 VLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
+ + + ++ N R L+L +++DEGI +R + + K+ + +S+K+
Sbjct: 62 LTLYQMHKIFGNWR---DLELLAVTVDEGIGDFRRECAKIAKKYANDLEIEHSTISFKEY 118
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
G T D++V+V CT+CGVFRR+ L+ A + + + G N DD+A+++++NI R
Sbjct: 119 IGITTDDVVQVDKELKPCTYCGVFRRKVLNMYAREIGANYLVLGLNLDDVAQSIIMNITR 178
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD ARLSR +G IPR P + E+E+ Y + Y C Y+P A R
Sbjct: 179 GDNARLSRLAPHKKIREGFIPRIIPLRKVREEEVRL-YVKLADIPYHPGRCPYAPLAIRD 237
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-PEQGTCERCGYISSQKWCKACVL 311
REF+ LE P I+ + + K + C+ CG ++ + CKAC L
Sbjct: 238 LYREFLDKLESRDPAVKFSILNFFDEIKPYIEEKYRAKLHPCKICGEPTTGEICKACEL 296
>gi|352682139|ref|YP_004892663.1| tRNA(Ile)-lysidine synthase MesJ [Thermoproteus tenax Kra 1]
gi|350274938|emb|CCC81584.1| tRNA(Ile)-lysidine synthase MesJ [Thermoproteus tenax Kra 1]
Length = 334
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC++C +R A R + E++C C + EE++ + I ++ +G+R+AI SGGKDS
Sbjct: 3 LCTSCGRRPAQFLRRSSGEKLCLSCLFRSIEEKVLRTIREEKMIISGDRVAIAISGGKDS 62
Query: 75 TVLAFVLSELNRRHNYG-LDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSY 130
VL VL +L +R ++ ++ +I+EG YR V+ +Y +P + ++
Sbjct: 63 LVLLDVLGKLRKRGHFPRVEFEAFTINEGHPYSCFYRMGRADVVRELAQKYDIPYTVYTF 122
Query: 131 KDLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
K+++G+T EI + I + CT GV RR+A++ K+AT HN DD A+T
Sbjct: 123 KEVFGFTALEIAERIWKMEPDIHMCTIDGVLRRRAMNIIGKKRGWTKVATAHNLDDEAQT 182
Query: 187 VLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
VLLN+L G++ R + L E+ I R KP KY E+EI YA++ + EC
Sbjct: 183 VLLNVLMGNLKRFAWFNLGDDAEEKDLIRRIKPLKYIREEEIAL-YAHYNNVPLMELECP 241
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKW 305
Y R + + +LER P +++ G + C+ CG SS++
Sbjct: 242 YVYTNPRYDLKFTLAELERRMPTVKYNLLSVGRQLGELMELRGGSYARCKYCGAPSSREI 301
Query: 306 CKACVLL 312
C+ C L
Sbjct: 302 CRVCELF 308
>gi|345785506|ref|XP_541458.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Canis
lupus familiaris]
Length = 274
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 7/169 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS+C+ +AAL+RP++ + +C CF FE E+ + +L G +A+GASGGKDST
Sbjct: 6 CSSCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVQAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VLA VL EL R G+ L L+++DEGI GYRD +L V+R + LPL +V+Y DL+
Sbjct: 66 VLAHVLRELAPR--LGVSLRLVAVDEGIGGYRDAALAAVRRQAALWDLPLTVVAYADLFG 123
Query: 135 GWTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATGHN 179
GWTMD + + + CTFCGV RR+AL+ GA L+ I TG +
Sbjct: 124 GWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGEH 172
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 282 ISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
++ + + G C RCG ++S+ +C+AC LL+ L RG P++ I + R
Sbjct: 185 LTPAARPQPPGACSRCGALASRAFCQACALLDVLQRGRPRLAIGKGR 231
>gi|448435590|ref|ZP_21586771.1| PP-loop domain protein [Halorubrum tebenquichense DSM 14210]
gi|445683521|gb|ELZ35915.1| PP-loop domain protein [Halorubrum tebenquichense DSM 14210]
Length = 331
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS VL +L ++ R + +++ L+I EGI GYRD+S+
Sbjct: 55 RWVIGLSGGKDSVVLTQILDDVFGR-DPRVEMLALTIHEGIEGYRDESVDACVELADDLS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+ ++VSY++ +G MD++V+ C +CGVFRR L+ A+ DK+ TGHN D
Sbjct: 114 MRHELVSYEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLEEYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T L+N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTALMNFLEGDVRQVAKHFDASLGPFEEREATDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFR----- 281
+ L EC ++ AYRG + I LE P A I+ + E +R
Sbjct: 233 RDLPTHMAECPHAEEAYRGEIQSTIHALEENHPGARHSIMAGYEELSALAAEAYRGDGTD 292
Query: 282 --ISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
S + P CERCG +S+ C+ C LLE +
Sbjct: 293 DDGSDAHDSPALRECERCGSQTSRDVCRKCRLLESIE 329
>gi|218883803|ref|YP_002428185.1| putative ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
gi|218765419|gb|ACL10818.1| Predicted ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
Length = 339
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 9/302 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A P + CR F E FE+++ + I ++ E I + SGGKDS
Sbjct: 4 CSICG-RPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKDSI 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL +L+R+ G + + +DEGI GYR+ +++ + + + IVS+K+ G
Sbjct: 63 ALLHVLHKLSRKMP-GWRVTAVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYIG 121
Query: 136 WTMDEIV---KVIGLKN-NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
++DEIV + GL C++CGVFRR L++ A L IAT HN DD+ +T L+NI
Sbjct: 122 ASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTFLMNI 181
Query: 192 LRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+ + ++ + T + + E+G I R KPF EKE ++ +C Y+
Sbjct: 182 ISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEYN 241
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK--MPEQGTCERCGYISSQKWCKA 308
R R+ I +LE P ++ S + T+ + ++ C+ CG SS C+A
Sbjct: 242 IRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRA 301
Query: 309 CV 310
C+
Sbjct: 302 CL 303
>gi|448345542|ref|ZP_21534431.1| PP-loop domain protein [Natrinema altunense JCM 12890]
gi|445633475|gb|ELY86662.1| PP-loop domain protein [Natrinema altunense JCM 12890]
Length = 319
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ CN+ +A + + +C + F E E+ + + + + L + IG S
Sbjct: 3 CNRCNE-EAVMHAAYSGAHLCEDHFRESVEKRVRRRVRRDDLVPHDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S++ + ++VS
Sbjct: 62 GGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVEACVELCEDLEIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L + A L+ D + TGHN DD A+T L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N+L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNVLEGDVEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVAL-YAHVDDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E + K + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 300 CGSTTTRDVCRKCSLLEAL 318
>gi|340343971|ref|ZP_08667103.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519112|gb|EGP92835.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 304
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +AA R + E++C CF + + I + + E +A+ SGGKDS
Sbjct: 3 CDRC-ENQAAYTRKYSGEKLCSRCFSSSIVRKTAKTISKYNMIQNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +++++ + HN+ + ++IDEGI GYR+++L+ V++ + + K+ SYK+L+
Sbjct: 62 ALLDIINQMTKTHNFRIKA--ITIDEGIPGYRNEALEIVQKYCAKLNVEHKVFSYKELFD 119
Query: 136 WTMDEIVKVIGLK--NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T++E + + + ++C+ CG RR+A+D A + D IATGHN DD +T ++N+L
Sbjct: 120 LTLEEALDLRESEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVINMLS 179
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
GD ++ + + + KPF YE EI+F YA+ + + + C + R
Sbjct: 180 GDTTKIGW--MDPDNSSNTLRKIKPFCEIYESEIVF-YAFTNDIPFQTEPCPHMNEGIRT 236
Query: 254 FAREFIKDLE----RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
REF+ LE ++ I+K + I ++ C +CG + K C C
Sbjct: 237 EIREFLNALEGKHSGIKNNLYQSIVKVSQ---IVKEGNNKQKTICIKCGNECTGKICSVC 293
Query: 310 VLL 312
++
Sbjct: 294 NMV 296
>gi|448531120|ref|ZP_21620954.1| PP-loop domain protein [Halorubrum hochstenium ATCC 700873]
gi|445707560|gb|ELZ59414.1| PP-loop domain protein [Halorubrum hochstenium ATCC 700873]
Length = 331
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ R + +++ L+I EGI GYRD+S+
Sbjct: 55 RWVIGLSGGKDSVALTQILDDVFGR-DPRVEMLALTIHEGIEGYRDESVDACVELADDLS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
+ ++VSY++ +G MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 MRHELVSYEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T L+N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTALMNFLEGDVRQVAKHFDASLGPFEEREATDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK--------SGENFR----- 281
+ L EC ++ AYRG + I LE P A I+ + E +R
Sbjct: 233 RDLPTHMAECPHAEEAYRGEIQSTIHALEENHPGARHSIMAGYEELSALAAEAYRGDGTD 292
Query: 282 --ISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
S + P CERCG +S+ C+ C LLE +
Sbjct: 293 DDGSDAHDSPALRECERCGSQTSRDVCRKCRLLESIE 329
>gi|385805212|ref|YP_005841610.1| PP-loop domain-containing protein [Fervidicoccus fontis Kam940]
gi|383795075|gb|AFH42158.1| PP-loop domain protein [Fervidicoccus fontis Kam940]
Length = 330
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 167/334 (50%), Gaps = 26/334 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R+A + T + +CRECF E + I + ++F + + + SGGKDS
Sbjct: 3 CSLCG-REAVFYQAFTNKYLCRECFIEDVRKRIANEVKDKRMFSERDNLLLAISGGKDSF 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VL +S + + LSI EGI GY R + ++ +K+ + G+ I S K+
Sbjct: 62 VLLDAVSHFHPSSK----IIALSIVEGIPGYNRQEYIERIKKYTKERGIDTVITSIKEFV 117
Query: 135 GWTMDEIV---KVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
G+++ EIV + +G++ + CT+CG RR+ ++ A L D+ T HN DD +TV +N
Sbjct: 118 GYSLGEIVEKSREMGIELSPCTYCGSLRRRIINVYARELGADRTLTAHNLDDEVQTVFMN 177
Query: 191 ILRGDIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC---IY 246
ILRGD RL R ++ D + R KP + YE E F YAY + TEC IY
Sbjct: 178 ILRGDPERLLRQHPLSPKLSDKLVQRVKPLRKIYEYEAAF-YAYLLGFKFQETECPYIIY 236
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG---TCERCGYISS- 302
P R R ++ LER P L I++ +N + + K+ E TC CG +S
Sbjct: 237 QPTL-RARIRHWLYMLEREAPGVELRILEFFDNLLLDRTNKLKELNSLPTCRICGEPTSI 295
Query: 303 -QKWCKACVLLEGL----NRGLPK-MGIVRSRGQ 330
+ CK C +LE PK MG R++G+
Sbjct: 296 GRDVCKLCEMLEKAGIEPKYNYPKHMGKWRAKGE 329
>gi|448417871|ref|ZP_21579676.1| hypothetical protein C474_12966 [Halosarcina pallida JCM 14848]
gi|445677444|gb|ELZ29946.1| hypothetical protein C474_12966 [Halosarcina pallida JCM 14848]
Length = 321
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
E IG SGGKDS VL +L E + + +++ L+I EGI GYRD+S+
Sbjct: 54 EHWVIGLSGGKDSVVLTHILDETFGK-DPRIEMTALTIHEGIEGYRDESVDACVELAEDI 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
+ ++V+Y++ +G MD++ + C +CGVFRR L+ A DK+ TGHN
Sbjct: 113 QMRHELVTYEEEFGVRMDDVAEEDPENMAPCAYCGVFRRDLLESYAEEFGGDKMLTGHNL 172
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTG---EDGP----IPRCKPFKYTYEKEIMFTYAY 233
DD AET L+N+L G++ ++++ + G E P +PR KP + EKE+ YA+
Sbjct: 173 DDEAETALMNVLEGNVKQMAKHFDASLGPFEERNPTDEFVPRAKPLRDIPEKEVAL-YAH 231
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM----- 288
K L TEC ++ A+RG +E + DLE P I+ E + +
Sbjct: 232 LKDLPAHITECPHASEAFRGEIQELMLDLEDRHPGTRHSIMSGYEEIAEMAADRYRGADN 291
Query: 289 PEQGTCERCGYISSQKWCKACVLLEGL 315
+ CERCG +++ C+ C LLE +
Sbjct: 292 ADLNDCERCGSTTARDVCRKCRLLESI 318
>gi|448391259|ref|ZP_21566502.1| PP-loop domain-containing protein [Haloterrigena salina JCM 13891]
gi|445666128|gb|ELZ18797.1| PP-loop domain-containing protein [Haloterrigena salina JCM 13891]
Length = 319
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C + +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCGE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPRDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ G+ ++VS
Sbjct: 62 GGKDSVVLTQILHD-TFAEDPRIELVGLTIHEGIEGYRDKSIDACVELADDLGIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L++ A L+ D + TGHN DD A+T L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAEKLEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG------EDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G E G +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGALSEREEQGEFVPRAKPLRDVPEKEVAL-YAHVNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + DLE P I+ E+ I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILAGYEDLAAIAADEFSGDDGADLRECAE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREICRKCSLLESL 318
>gi|288561212|ref|YP_003424698.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288543922|gb|ADC47806.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 285
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 137/282 (48%), Gaps = 17/282 (6%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
I +E F E I+ +I QL K GE+IAI SGGKDS + L ++ +L
Sbjct: 3 INKEEFNEKIFSRINNLIDDYQLIKEGEKIAIALSGGKDSVLTLHALKNYKDSADFDFEL 62
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ +DEGI GYR + N +PL S+K+ G+ +D+I K+ C C
Sbjct: 63 VAILVDEGIDGYRQHGIDAAVNNAQLLEIPLIQKSFKEEEGFALDDIYSY--FKSACIPC 120
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDGPI 213
GVFRR L++ A + DKIATGHN DD ++ L++ RGD + S+ + + +
Sbjct: 121 GVFRRNILNKTAYEIGADKIATGHNLDDEIQSFLMSFSRGDTVKFSKFGPELDQIHEKLV 180
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDI 273
PR KP T EKE+ +A ++ EC YS + R +EF+ E P ++
Sbjct: 181 PRIKPLWNTPEKEVGM-WAILNGVEIHLDECPYSNLSLRAKIKEFLNKTESKHPGTKENV 239
Query: 274 IKS------GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ S EN R S CERCG +S + CKAC
Sbjct: 240 LNSFIKTLDVENVRTVLS-------ECERCGEPTSGRVCKAC 274
>gi|242022948|ref|XP_002431899.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
gi|212517240|gb|EEB19161.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
Length = 116
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 81/106 (76%)
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE 290
YAYFK L YFSTEC+++PNAYRG R F+KDLE++RP +I++II SGE+ + K+P+
Sbjct: 2 YAYFKNLHYFSTECVFAPNAYRGHVRTFLKDLEKIRPASIINIIHSGESIGLKKGIKLPQ 61
Query: 291 QGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTK 336
+GTC +CG++SSQ CKAC LL GLN+GLPK+GI ++ N +K
Sbjct: 62 KGTCSKCGFVSSQLICKACTLLAGLNKGLPKIGIGKTSKVNKALSK 107
>gi|124027476|ref|YP_001012796.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123978170|gb|ABM80451.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 331
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 16/291 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C + F E F+ ++ + + +LF E+I + SGGKDS L L L++R G +
Sbjct: 9 FCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSKRVP-GWRV 67
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKV---IGLKN-N 150
L +DEGI GYR+ +++ R ++G+ +I ++D +G+T+DEIVK+ GL
Sbjct: 68 AALLVDEGIRGYREYTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKERGLPYLP 127
Query: 151 CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED 210
CT+CGVFRR +++ A + +AT HN DD+ +T L+N+ D +++R I+
Sbjct: 128 CTYCGVFRRYLMNKTAREMGATVVATAHNLDDLVQTYLMNVFNNDWDKIARLGPISGPGT 187
Query: 211 GP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
P + + KPF EKE YA L EC Y+ + R + R + +LE P
Sbjct: 188 HPRFVRKVKPFYEVLEKETTI-YAVINGLYTGFEECPYARLSVRWYIRRMLNELEERSPG 246
Query: 269 AILDIIKS--------GENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
+++S E R+ T + TC CG S+ C+AC L
Sbjct: 247 VKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQL 297
>gi|448321780|ref|ZP_21511255.1| PP-loop domain protein [Natronococcus amylolyticus DSM 10524]
gi|445602832|gb|ELY56803.1| PP-loop domain protein [Natronococcus amylolyticus DSM 10524]
Length = 324
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 20/268 (7%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + + ++L L+I EGI GYRD SL+ + +
Sbjct: 58 IGLSGGKDSVVLTQILHD-TFAEDPRIELVGLTIHEGIEGYRDKSLEACVDLADELEIRH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY++ +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A
Sbjct: 117 EVVSYEEEFGIRMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELEADLLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSR---CTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N L GD+A++++ +L E G +PR KP + EKE+ YA+ + L
Sbjct: 177 QTALMNFLEGDVAQMAKHFDASLGPVSERGEQEEFVPRAKPLRDVPEKEVAL-YAHVEDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRP---RAILD-------IIKSGENFRISTSTK 287
TEC ++ AYRG ++ + DLE P +IL I+
Sbjct: 236 PAHITECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELAGIVADDRAGEAEDDDG 295
Query: 288 MPEQGTCERCGYISSQKWCKACVLLEGL 315
P+ C CG ++++ C+ C LLE L
Sbjct: 296 GPDLRECAECGSTTTREVCRKCGLLESL 323
>gi|448338179|ref|ZP_21527231.1| PP-loop domain protein [Natrinema pallidum DSM 3751]
gi|445623354|gb|ELY76776.1| PP-loop domain protein [Natrinema pallidum DSM 3751]
Length = 319
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPHDATPETPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S++ + ++VS
Sbjct: 62 GGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVEACVELCEALEIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L + A L+ D + TGHN DD A+T L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N+L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNVLEGDVEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC ++ AYRG ++ + DLE P I+ E + K + C
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGADLQDCVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 300 CGSTTTRDVCRKCSLLEAL 318
>gi|399575712|ref|ZP_10769470.1| hypothetical protein HSB1_15090 [Halogranum salarium B-1]
gi|399239980|gb|EJN60906.1| hypothetical protein HSB1_15090 [Halogranum salarium B-1]
Length = 315
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 150/306 (49%), Gaps = 26/306 (8%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGASGGKDSTVLAFVLSELNRR 87
+C + F ++ + + I + + A E IG SGGKDS VL +L E +
Sbjct: 9 HLCEDHFCASVDKRVRRRIREDSMLPADATPEDPETWVIGLSGGKDSVVLTHILDETFGK 68
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL 147
+ +++ L+I EGI GYRD S+ + + ++V+Y+D G MD++ + +
Sbjct: 69 -DPRIEMIALTIHEGIEGYRDKSVDACVELAEKLEMRHELVTYEDELGVKMDDVAEKDPM 127
Query: 148 K-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT 206
C +CGVFRR L+ A DK+ TGHN DD AET L+N L GD+ ++++ +
Sbjct: 128 DMAPCAYCGVFRRDLLENFADEFGADKLLTGHNLDDEAETALMNFLEGDVKQVAKHFDAS 187
Query: 207 TG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFI 259
G +D IPR KP + EKE+ YA+ K L TEC ++ A+RG ++ +
Sbjct: 188 IGGFDDRNEQDDFIPRAKPLRDVPEKEVAL-YAHLKDLPAHITECPHASEAFRGEIQQLM 246
Query: 260 KDLERLRPRAILDIIK--------SGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
LE P I+ + E +R + + CERCG +++ C+ C
Sbjct: 247 LKLEENHPGTRHSIMAGYEELAQLAAERYRGDADGDGEGVDLNECERCGSTTARDVCRKC 306
Query: 310 VLLEGL 315
L+E +
Sbjct: 307 RLIESI 312
>gi|297526784|ref|YP_003668808.1| PP-loop domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255700|gb|ADI31909.1| PP-loop domain protein [Staphylothermus hellenicus DSM 12710]
Length = 331
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 18/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + + R + C++ F E F++++ + I ++F + E I + SGGKDS
Sbjct: 4 CSICGRPAVYINRISG-QAFCKKHFLEYFDKKVRRTIRRYKMFSSKEHIVVAVSGGKDSL 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L L++R G + L IDEGI GYRD + + R + G+ KI S+++ +G
Sbjct: 63 SLLHYLYNLSKRVP-GWRITALLIDEGIRGYRDITKKDFLRVVNELGVDYKIASFEEYFG 121
Query: 136 WTMDEIVKV---IGLKN-NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DEIV++ GL C++CGVFRR L++ A L +AT HN DD+ +T ++NI
Sbjct: 122 YTLDEIVRIGREKGLPYLPCSYCGVFRRYLLNKVARELGGTVLATAHNLDDVVQTYVMNI 181
Query: 192 LRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
+ ++ R +T D P + R KPF EKE Y+ L EC Y+
Sbjct: 182 INNSWDKILRLAPVTGPLDHPKFVRRVKPFYEILEKETTL-YSILNNLYPKFVECPYARF 240
Query: 250 AYRGFAREFIKDLERLRP-------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
R R + +LE P R++L II R E TC+ CG S+
Sbjct: 241 NIRWMIRRQLNELEEKYPGTKYSLLRSLLRIIDILSKHR--DEIIHGEIKTCKVCGEPSA 298
Query: 303 QKWCKACV 310
+ C+AC+
Sbjct: 299 HEICRACL 306
>gi|118575266|ref|YP_875009.1| ATPase of the PP-loop superfamily [Cenarchaeum symbiosum A]
gi|118193787|gb|ABK76705.1| ATPase of the PP-loop superfamily [Cenarchaeum symbiosum A]
Length = 269
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 137/261 (52%), Gaps = 14/261 (5%)
Query: 61 GERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
G+R+A+G SGGKDS VL +L +++++ +G +L ++IDEGI GYRD++L V+
Sbjct: 5 GDRVAVGVSGGKDSLVLLHILEQMSQK--WGFELEAVTIDEGIPGYRDEALSIVEEYCGS 62
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIG--LKNNCTFCGVFRRQALDRGASLLKVDKIATGH 178
G+ ++ +YKDL+ T+DE + + G + +C+ CG RR+A+D D +AT H
Sbjct: 63 LGVAHRVYAYKDLFDMTLDEALNMRGENSQTSCSICGTLRRRAMDHAIHDTGADVLATAH 122
Query: 179 NADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLD 238
N DD +T L+N++ GD R++ T+ + + + KPF YE EI+F YA+ ++
Sbjct: 123 NLDDTLQTFLINMISGDTDRIAWMDPDTSSNE--LRKIKPFCEIYESEIVF-YAFANKIP 179
Query: 239 YFSTECIYSPNAYRGFAREFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTC 294
+ + C + R R F+ LE A ++K E R E+ C
Sbjct: 180 FQAESCPHMDEGIRTELRIFLNSLEESHSGAKNSLYRSVMKVTEALRPEVHK---ERQQC 236
Query: 295 ERCGYISSQKWCKACVLLEGL 315
CG + C C + GL
Sbjct: 237 PGCGNSCTGGVCSVCRTISGL 257
>gi|448399274|ref|ZP_21570576.1| PP-loop domain protein [Haloterrigena limicola JCM 13563]
gi|445669181|gb|ELZ21794.1| PP-loop domain protein [Haloterrigena limicola JCM 13563]
Length = 319
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 28/322 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L + IG S
Sbjct: 3 CNRCDE-EAIMHAAYSGAHLCTDHFRESVEKRVRRRVRRDDLVPHDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD SL+ G+ ++VS
Sbjct: 62 GGKDSVVLTKILHD-TFAEDPRIELVGLTIHEGIEGYRDKSLEACVDLTEDLGIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L + A L+ D + TGHN DD A++ L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSKYADELEADLLLTGHNLDDEAQSAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKEI YA+ L
Sbjct: 181 MNFLEGDVEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDVPEKEIAL-YAHVNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKS--------GENFRISTSTKMPEQGT 293
TEC +S AYRG ++ + LE P I+ E F + E
Sbjct: 240 TECPHSSEAYRGEIQQLLYGLEENHPGTRHSILSGYEELAGILSEEFSGDDGADLQE--- 296
Query: 294 CERCGYISSQKWCKACVLLEGL 315
C CG ++++ C+ C LLE L
Sbjct: 297 CAECGSTTTREVCRKCSLLESL 318
>gi|87045850|gb|ABD17746.1| putative GMP synthase [Methanococcus voltae PS]
Length = 318
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 13/288 (4%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSEL-NRRHNYGL 92
+ C+ECF + + ++ + + G + K I +G SGGKDS V+A +L+E N+ N
Sbjct: 30 KFCKECFIKDTKRKVRKNL-GKNILKNHITIGVGISGGKDSLVMAHILNEFFNQIPNS-- 86
Query: 93 DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN--- 149
+ + ++EGI G+R+D ++ + +YG+ IV++ + +D IV + KN
Sbjct: 87 KIVGIMVNEGIEGFRNDGIEKGIKFCEEYGIEYHIVTFSEYIDSDLDSIVAIAKEKNMTM 146
Query: 150 -NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
C+FCGV RR+ L+R A D +A GHN DDI++ V++N + GDI +L+ ++
Sbjct: 147 NPCSFCGVIRRKILNRVAIEKGCDYLAIGHNLDDISQAVMMNYIEGDIKKLAILGK-SSQ 205
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
D + R KP E+E+ +A +DY C YS +YR + I LE
Sbjct: 206 SDKFVKRIKPLSKIPEEEVKL-FADILEMDYHKEPCPYSCLSYRSEVSDIIDTLEEKHAG 264
Query: 269 AILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACVLLEGL 315
A+ I+ E R+ ++PE CE+CG S+ K CK C L+ L
Sbjct: 265 AMYSIVAGYE--RLLEYLEVPESVSICEKCGEPSALKICKVCSFLKDL 310
>gi|126464914|ref|YP_001040023.1| PP-loop domain-containing protein [Staphylothermus marinus F1]
gi|126013737|gb|ABN69115.1| PP-loop domain protein [Staphylothermus marinus F1]
Length = 330
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 152/308 (49%), Gaps = 18/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + + R + C++ F E F++++ + I ++F + E I + SGGKDS
Sbjct: 3 CSICGRPAVYVNRISG-QAYCKKHFLEYFDKKVRRTIRKYKMFSSREHIVVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L L++R G + L IDEGI GYRD + + R + G+ KI S+K+ G
Sbjct: 62 SLLHYLYNLSKRVP-GWKITALLIDEGIGGYRDITKKDFLRVVNELGVNYKIASFKEYLG 120
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+T+DEIV++ K C++CGVFRR L++ A L +AT HN DD+ +T ++NI
Sbjct: 121 YTLDEIVRIGREKGLPYLPCSYCGVFRRYLLNKVARDLGGTVLATAHNLDDVIQTYVMNI 180
Query: 192 LRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
+ ++ R +T D P + R KPF EKE Y+ L EC Y+
Sbjct: 181 INNSWDKILRLAPVTGPLDHPKFVRRAKPFYEILEKETTL-YSILNNLYPKFVECPYARF 239
Query: 250 AYRGFAREFIKDLERLRP-------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
R R + +LE P R++L II R E TC+ CG S+
Sbjct: 240 NIRWMIRRQLNELEEKYPGTKYSLLRSLLRIISILSKHR--DEIIQGEIKTCKVCGEPSA 297
Query: 303 QKWCKACV 310
+ C+AC+
Sbjct: 298 HEICRACL 305
>gi|296237834|ref|XP_002763910.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Callithrix
jacchus]
Length = 194
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 108/167 (64%), Gaps = 7/167 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CTSCHAARAALRRPRSGQALCGACFCTAFEAEVLHTVLTGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+
Sbjct: 66 VLAHVLRELVPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 135 GWTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIATG 177
GWTMD + + ++ CTFCGV RR+AL+ GA + I TG
Sbjct: 124 GWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTG 170
>gi|448313441|ref|ZP_21503160.1| hypothetical protein C493_16025 [Natronolimnobius innermongolicus
JCM 12255]
gi|445598516|gb|ELY52572.1| hypothetical protein C493_16025 [Natronolimnobius innermongolicus
JCM 12255]
Length = 321
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 30/324 (9%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+ +A + + +C + F E E+ + + + + L E IG S
Sbjct: 3 CNRCDA-EAVMHAAYSGAHLCDDHFRESVEKRVRRRVRRDDLVPKDATPDDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL VL + + ++L L+I EGI GYRD+S+ + ++VS
Sbjct: 62 GGKDSVVLTTVLHD-TFAEDPRIELVGLTIHEGIEGYRDESVDACVELAADLEIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L++ A L D + TGHN DD A+T L
Sbjct: 121 YEEEFGIRMDDVVEDDPENMAACAYCGVFRRDLLEKYADELGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD++++++ + G ED +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVSQIAKHFDASLGPLSEREDQEEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRP----------RAILDIIKSGENFRISTSTKMPEQ 291
TEC ++ AYRG ++ + DLE P + I+ N S + E
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEEVAGIVADEFNDDAEESADLRE- 298
Query: 292 GTCERCGYISSQKWCKACVLLEGL 315
C CG ++++ C+ C LLE L
Sbjct: 299 --CVECGSTTTRERCRKCSLLESL 320
>gi|322371601|ref|ZP_08046147.1| PP-loop domain protein [Haladaptatus paucihalophilus DX253]
gi|320548892|gb|EFW90560.1| PP-loop domain protein [Haladaptatus paucihalophilus DX253]
Length = 322
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 23/321 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C C +R+A + + +C + F E+ + + I + L A + IG S
Sbjct: 3 CDKC-EREAVMHAAYSGLHLCDDHFCRSVEKRLRRRIRDDNLLPASATPDDPQVWLIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD SL + ++VS
Sbjct: 62 GGKDSVVLTKILHD-TFAEDPRIELVALTIHEGIEGYRDKSLDACLELTDDLDIRHEVVS 120
Query: 130 YKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ + MD++V K C +CGVFRR L + A +K+ TGHN DD AET L
Sbjct: 121 YEEEFDLRMDDVVGKDPENMAACAYCGVFRRDLLSKYAEEYGANKLLTGHNLDDEAETAL 180
Query: 189 LNILRGDIARLSRCTLIT-------TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+A++++ + + +D +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVAQVAKHFDASLAGFDERSDQDEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP------EQGTCE 295
TEC +S AYR ++ + LE P I+ E + + E CE
Sbjct: 240 TECPHSSEAYRAEIQQLMLSLEENHPGTRHSIMAGYEELAKLAADEFGAGDGKRELNECE 299
Query: 296 RCGYISSQKWCKACVLLEGLN 316
RCG +++ C+ C L++ ++
Sbjct: 300 RCGAATTRDVCRKCSLVDAIH 320
>gi|126460252|ref|YP_001056530.1| PP-loop domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126249973|gb|ABO09064.1| PP-loop domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 327
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 16/312 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +R A R + E++C +C + E ++ + I L G+ +A+ SGGKDS
Sbjct: 4 LCDRCGKRPAQYLRQVSGEKLCLKCLFASIENKVVETIRKEWLIVPGDYVAVAVSGGKDS 63
Query: 75 TVLAFVLSELNRRHNY-GLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSY 130
VL ++L +L R G+ L +I+EG YR V+ ++G+ + +
Sbjct: 64 LVLLYILGKLRERGALRGVRLEAFTINEGHPYSCFYRMSRRDYVRELAEKFGVEYNVYHF 123
Query: 131 KDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
KD++G T E+ + + + CT GV RR+A++ KIAT HN DD A+T
Sbjct: 124 KDIFGVTAMELSERLAKAGHEVHMCTIDGVLRRRAMNIIGKRRGWTKIATAHNLDDEAQT 183
Query: 187 VLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
V+LN+L G++ R + L E+ +PR KP KY E+EI YAY+ + EC
Sbjct: 184 VMLNVLMGNLGRFAWFGLYEDAEEKDLVPRIKPLKYIREEEIAL-YAYYHGIPLMELECP 242
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT----CERCGYIS 301
Y R + + LER P +++ GE R++ + + G C+ CG S
Sbjct: 243 YVVANPRYDLKFTLAGLEREMPSVKYNLVSFGE--RLAKLLRAAQPGAVVKRCKYCGAPS 300
Query: 302 SQKWCKACVLLE 313
++ C+ C L E
Sbjct: 301 ARDVCRTCELFE 312
>gi|284166087|ref|YP_003404366.1| PP-loop domain-containing protein [Haloterrigena turkmenica DSM
5511]
gi|284015742|gb|ADB61693.1| PP-loop domain protein [Haloterrigena turkmenica DSM 5511]
Length = 319
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 159/319 (49%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C++ +A + + +C + F E E+ + + + + L +A + IG S
Sbjct: 3 CNRCDE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPRDATPEAPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTQILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVELADDLDIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L++ A L+ D + TGHN DD A+T L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAEKLEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ED +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGALSEREDQAEFVPRAKPLRDVPEKEVAL-YAHINDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC ++ AYRG ++ + LE P I+ E + + E C +
Sbjct: 240 TECPHASEAYRGEIQQLLYGLEENHPGTRHSILAGYEELASIAADEFSGDDGAELQECTQ 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREICRKCSLLESL 318
>gi|448306654|ref|ZP_21496557.1| PP-loop domain protein [Natronorubrum bangense JCM 10635]
gi|445597165|gb|ELY51241.1| PP-loop domain protein [Natronorubrum bangense JCM 10635]
Length = 319
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C + +A + + +C + F E E+ + + + + L + IG S
Sbjct: 3 CNRCPE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPHDVTPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + + ++L L+I EGI GYRD SL+ G+ ++VS
Sbjct: 62 GGKDSVVLTQILHDTFAK-DPRIELIGLTIHEGIEGYRDKSLEACLDLTDDLGIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A++ L
Sbjct: 121 YEEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELEADLLLTGHNLDDEAQSAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDIPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC +S AYRG ++ + LE P I+ E S + + C
Sbjct: 240 TECPHSSEAYRGEIQQLLYGLEENHPGTRHSILSGYEELASILSDEFSGDDGADLQACAE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 300 CGSTTTRDICRKCSLLESL 318
>gi|448317233|ref|ZP_21506791.1| hypothetical protein C492_12335 [Natronococcus jeotgali DSM 18795]
gi|445604657|gb|ELY58604.1| hypothetical protein C492_12335 [Natronococcus jeotgali DSM 18795]
Length = 324
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 27/324 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI------AIGAS 69
C+ C++ +A + + +C+ F E E+ + + + + L IG S
Sbjct: 3 CTRCDE-EAIMHAAYSGAHLCQHHFRESVEKRVRRRVRRDDLVPQDATPDDPLTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD+S++ + + ++VS
Sbjct: 62 GGKDSVVLTRILHD-TFAEDPRIELVGLTIHEGIEGYRDESVEACVELTDELEMRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MD++V+ C +CGVFRR L A L D + TGHN DD A+T L
Sbjct: 121 YEEEFGIRMDDVVEDDPENMAACAYCGVFRRDLLSTYAEDLGADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSR---CTLITTGEDGP----IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+A++++ +L E G +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVAQIAKHFDASLGPLSERGEQSEFVPRAKPLRDVPEKEVAL-YAHVEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRP---RAILD-------IIKSGENFRISTSTKMPEQ 291
TEC ++ AYRG ++ + DLE P +IL I+ P+
Sbjct: 240 TECPHASEAYRGEIQQLLYDLEENHPGTRHSILSGYEELAGIVADDRAGDAEDDGGGPDL 299
Query: 292 GTCERCGYISSQKWCKACVLLEGL 315
C CG ++++ C+ C LLE L
Sbjct: 300 RECAECGSTTTREICRKCSLLESL 323
>gi|171185906|ref|YP_001794825.1| PP-loop domain-containing protein [Pyrobaculum neutrophilum V24Sta]
gi|170935118|gb|ACB40379.1| PP-loop domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 329
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +R+A R + E++C C + E ++ I ++L + G+ +A+ SGGKDS
Sbjct: 3 LCDRCGKRQAQYFRAASGEKLCLRCLFGSIERKVLDTIRRHRLIEPGDYVAVAVSGGKDS 62
Query: 75 TVLAFVLSE-LNRRHNYGLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSY 130
VL ++L L R + + +I+EG YR V+ + G+ + S+
Sbjct: 63 LVLLYMLGRFLQRGLLKDVKMEAFTINEGHPYSCFYRMAKRDYVRELAGKLGIEYNVYSF 122
Query: 131 KDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
KD++G T E+ + + + + CT GV RR+ ++ S KIAT HN DD A+T
Sbjct: 123 KDIFGVTAMELAENLSKRGHEVHMCTIDGVLRRRVMNIIGSRRGWTKIATAHNLDDEAQT 182
Query: 187 VLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
VL+N+L G+++R E+ IPR KP KY E+E+ YAY+ + EC
Sbjct: 183 VLMNVLMGNLSRFRWYGRHEDAEEKDLIPRIKPLKYVREEEVAI-YAYYHGIPLMELECP 241
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT----CERCGYIS 301
Y R + + D+ER P +++ GE ++S + + P+ C+ CG +S
Sbjct: 242 YVVANPRYNLKFLLADMEREMPSVKYNLVSFGE--KLSNALREPQGAKSLRRCKYCGAVS 299
Query: 302 SQKWCKACVLLE 313
+ C+ C L E
Sbjct: 300 PRDICRVCELFE 311
>gi|302348148|ref|YP_003815786.1| hypothetical protein ASAC_0348 [Acidilobus saccharovorans 345-15]
gi|302328560|gb|ADL18755.1| hypothetical protein ASAC_0348 [Acidilobus saccharovorans 345-15]
Length = 329
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 161/328 (49%), Gaps = 19/328 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LCS C R+A + +P++ E +CRECF+E + + + + + G+ I + SGGKD
Sbjct: 4 LCSRCGLRQAEVYQPQSGESLCRECFFEDITARVKREVERWNMIEPGDVILLALSGGKDG 63
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L V+S + + L L+I EGI GY +++ + + ++G+ + + S K+
Sbjct: 64 YTLLDVMSRIYKSDR----LIGLNIIEGIHGYNKEEDARYLVMTAKEFGIDVIVTSIKEY 119
Query: 134 YGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G ++DEI+ ++ CT+CG+ RR+ ++ A L +K+AT HN DD ++T ++
Sbjct: 120 TGLSVDEIMYKAKERSTRVSACTYCGIARRRIMNYYARELGANKLATAHNLDDESQTAVI 179
Query: 190 NILRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC--I 245
NILRGD L R + P + R KP + YE E T+ + K TEC I
Sbjct: 180 NILRGDFESLLRQHPLAELVRDPMLVRRIKPLRKIYEWETA-TFTFLKGYHIQETECPYI 238
Query: 246 YSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ---GTCERCG--YI 300
Y R R + E P A+L I+S + + + + G C RCG
Sbjct: 239 YQLPTLRAKVRRELYRYESEHPGALLRFIESLDRMLEPIAAGIKPRSDLGRCVRCGEPTP 298
Query: 301 SSQKWCKACVLLEGLNRGLPKMGIVRSR 328
S + CK C LLEG+ P + R R
Sbjct: 299 SGKALCKLCELLEGIGVASPLYSVRRLR 326
>gi|335437064|ref|ZP_08559849.1| PP-loop domain protein [Halorhabdus tiamatea SARL4B]
gi|334896825|gb|EGM34970.1| PP-loop domain protein [Halorhabdus tiamatea SARL4B]
Length = 319
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 128/262 (48%), Gaps = 14/262 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L+E + ++L LSI EGI GYRD+SL + L
Sbjct: 58 IGLSGGKDSVVLTQLLAE-TFAEDPRIELVALSIHEGIEGYRDESLDAAEALTDDLALRH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+ VSY + +G MD++V+ C +CGVFRR L R A D + TGHN DD A
Sbjct: 117 ETVSYSEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSRYADEYDADLLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
ET L+N GD+ ++++ + G D +PR KP + EKE+ YA L
Sbjct: 177 ETALMNFFEGDVDQMAKHFDASLGPMPERSLTDKHVPRAKPLRDVPEKEVAL-YARLADL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQG---T 293
TEC ++ AYRG +E + +E P I+ E R + + G
Sbjct: 236 PAHITECPHAEEAYRGEIQELLYSMEEAHPGTRHSIMAGYEQLARYAAERVDTDDGAYDA 295
Query: 294 CERCGYISSQKWCKACVLLEGL 315
C+ CG +S C+ C LL L
Sbjct: 296 CDTCGAPTSGDRCRKCQLLSAL 317
>gi|159905700|ref|YP_001549362.1| PP-loop domain-containing protein [Methanococcus maripaludis C6]
gi|159887193|gb|ABX02130.1| PP-loop domain protein [Methanococcus maripaludis C6]
Length = 311
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 158/307 (51%), Gaps = 16/307 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + L++ + CR CF + ++ + + G + K R+A+G SGGKDS
Sbjct: 3 CRKCGKPSIYLQK-HSGNNYCRTCFIKETTRKVRKTL-GRDVLKNNIRVAMGLSGGKDSL 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+A++L+E ++ + + ++EGI GYR D + + ++ + KIV +KD G
Sbjct: 61 VMAYILNEFYKQIPNS-KIIAIIVNEGIEGYRTDGIDAAIKFCEEHNIEYKIVHFKDYLG 119
Query: 136 WTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
+DEIVK+ KN C+FCGV RR+ L+R + K D +A GHN DD+A+ V++N
Sbjct: 120 TNLDEIVKLAKEKNLTMNPCSFCGVIRRKILNRVSLEEKCDFLAIGHNLDDVAQAVMMNY 179
Query: 192 LRGDIARLSRCTLITTGEDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
+ GD+ +L+ + P + R KP + E E++ A L Y + C YS
Sbjct: 180 IEGDVKKLA---FLGKSLKHPKFVKRIKPLEKIPEDEVLLL-ADLLELKYHKSPCPYSCL 235
Query: 250 AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKA 308
++R E LE+ P I++ E R+ ++P G C+ CG +S+ + CK
Sbjct: 236 SFRSEVSEITDTLEKNHPGTKYSIVRGYE--RLLEHIELPGYTGECKICGDLSATEVCKV 293
Query: 309 CVLLEGL 315
C L+ L
Sbjct: 294 CSYLKNL 300
>gi|345006050|ref|YP_004808903.1| hypothetical protein [halophilic archaeon DL31]
gi|344321676|gb|AEN06530.1| protein of unknown function UPF0021 [halophilic archaeon DL31]
Length = 321
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 51 VIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDS 110
++ + ++ E IG SGGKDS VL +LS+ + + ++L LSI EGI GYRD+S
Sbjct: 43 LLASDATPESPETWVIGLSGGKDSVVLTEILSDTFGK-DPRVELVALSIHEGIEGYRDES 101
Query: 111 LQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLL 169
L + + +V Y++ +G MD++V+ C +CGVFRR L+ A L
Sbjct: 102 LAASEELTEALDIQHTVVGYEEEFGVRMDDVVEDDPENMAPCAYCGVFRRDLLESYAEEL 161
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYT 222
DK+ TGHN DD A+T L+N+L GDI ++++ + G + +PR KP +
Sbjct: 162 GADKLLTGHNLDDEAQTALMNVLEGDIKQVAKHFDASIGGFDDREETEAFVPRAKPLRDV 221
Query: 223 YEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
EKE+ YA+ K L TEC ++ AYRG +E + LE P I+ E
Sbjct: 222 PEKEVAL-YAHLKDLPAHITECPHASEAYRGEIQELLLKLEENHPGTRHSIMSGYEELAA 280
Query: 283 STSTKM-PEQGT----CERCGYISSQKWCKACVLLEGL 315
+ E G C CG +S C+ C LL +
Sbjct: 281 LAADAYGGEDGQALRECTECGSTTSADVCRKCRLLASM 318
>gi|448377228|ref|ZP_21560071.1| PP-loop domain protein [Halovivax asiaticus JCM 14624]
gi|445656109|gb|ELZ08950.1| PP-loop domain protein [Halovivax asiaticus JCM 14624]
Length = 321
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 132/265 (49%), Gaps = 17/265 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + + ++L L+I EGI GYRD S+ +
Sbjct: 58 IGLSGGKDSVVLTQILHD-TFAEDPRIELVGLTIHEGIEGYRDKSVDACVELTADLDIQH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY+D +G MD++V+ C +CGVFRR L R A L D + TGHN DD A
Sbjct: 117 ELVSYEDEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSRYAEELGADLLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N L GD+ ++++ + G +D + R KP + EKE+ YA+ L
Sbjct: 177 QTALMNFLEGDVGQIAKHFDASLGPLPDREDQDDFVARAKPLRDVPEKEVAL-YAHLNDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG----- 292
TEC ++ AYRG + + DLE P I+ E +T+ E G
Sbjct: 236 PAHITECPHASEAYRGEIQGLLYDLEERHPGTRHSIMAGYEELADVAATEYGEDGDVELT 295
Query: 293 TCERCGYISSQKW--CKACVLLEGL 315
C +CG +S C+ C LL+ L
Sbjct: 296 DCPQCGSTTSVTGDRCRKCTLLDAL 320
>gi|261403320|ref|YP_003247544.1| PP-loop domain-containing protein [Methanocaldococcus vulcanius M7]
gi|261370313|gb|ACX73062.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
Length = 305
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 152/291 (52%), Gaps = 11/291 (3%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSEL-NRRHNYGLD 93
+C +CF + E+ + +V+ G ++ + +I +G SGGKDS V+ ++L + + N +
Sbjct: 20 LCEDCFKKDVEKRVRKVL-GREVIRNNVKIGVGISGGKDSLVMTYILKKFYDSIPNSEII 78
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV-----KVIGLK 148
F +DEGI G+RD + + V ++ + L+I+S+K+ +TMDE+V K + +
Sbjct: 79 CFF--VDEGIKGFRDVAKKYVVEFCKEFDIDLRIISFKEEINYTMDELVEKNYLKHLNIG 136
Query: 149 NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
C+FCGV RR L++ A L +A GHN DD +T+L+N + G++ + + +
Sbjct: 137 KPCSFCGVVRRYLLNKYAFLNNCTYLAIGHNLDDFCQTILMNYIEGNVKNIIQFGKDVSS 196
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+ R KP K E+E++ YA L Y C YS +YR ++ I+ LE +P
Sbjct: 197 STNFVKRIKPLKLIPEEEVIL-YAKLNNLKYQKEPCPYSHLSYRYKIKKIIEMLEEDKPG 255
Query: 269 AILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
I++ E+ + C+ CG + S + CK C LE L +GL
Sbjct: 256 VRFGILRGYESLLKLIEYREGNLKKCKICGSLCSGELCKVCSWLEIL-KGL 305
>gi|327310455|ref|YP_004337352.1| PP-loop domain-containing protein [Thermoproteus uzoniensis 768-20]
gi|326946934|gb|AEA12040.1| PP-loop domain protein [Thermoproteus uzoniensis 768-20]
Length = 334
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 9/307 (2%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C++C +R+A R + E++C C + EE++ + I ++ + G+++A+ SGGKDS
Sbjct: 4 VCTSCGKRQAQFLRRSSGERLCLNCLFRSIEEKVWRTIRDERMIEPGDKVAVAISGGKDS 63
Query: 75 TVLAFVLSELNRRHNY-GLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSY 130
VL +L +L R ++L +I+EG YR VK +YG+ + ++
Sbjct: 64 LVLLDILGKLKARGRLKDVELEAFTINEGHPYSCFYRMSRADFVKELAGRYGVAYSVFNF 123
Query: 131 KDLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAET 186
K+++G++ E+ + + + C G+ RR+A++ KIAT HN DD A+T
Sbjct: 124 KEVFGYSALELAERLWKSGVDIHMCAVDGILRRKAMNLIGKRRGWTKIATAHNLDDEAQT 183
Query: 187 VLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
VLLN+L G++ R + L E + R KP KY E+E+ YA++ + EC Y
Sbjct: 184 VLLNVLMGNLKRFAWLDLDDAEEKDLVRRIKPLKYVREEEVA-VYAHYHGIPLMELECPY 242
Query: 247 SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
R + + +LE P +++ G + C+ CG SS+ C
Sbjct: 243 VYTNPRYGLKFMLAELEERMPNVKYNLVSFGRRLGEVLRGQEIPYSRCKYCGAPSSRDVC 302
Query: 307 KACVLLE 313
+AC L E
Sbjct: 303 RACELFE 309
>gi|448361666|ref|ZP_21550280.1| PP-loop domain-containing protein [Natrialba asiatica DSM 12278]
gi|445649885|gb|ELZ02817.1| PP-loop domain-containing protein [Natrialba asiatica DSM 12278]
Length = 319
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+Q A + + +C + F E + + + I + L + IG S
Sbjct: 3 CNRCDQ-DAVMHAAYSGSHLCADHFRESVAKRVRRRIRRDDLVPQDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ G+ ++VS
Sbjct: 62 GGKDSVVLTQLLHD-TFDDDPRIELVGLTIHEGIEGYRDKSVDACVELSDDLGIHHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ED +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + +LE P II E I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLEAL 318
>gi|325958096|ref|YP_004289562.1| hypothetical protein Metbo_0338 [Methanobacterium sp. AL-21]
gi|325329528|gb|ADZ08590.1| protein of unknown function UPF0021 [Methanobacterium sp. AL-21]
Length = 283
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+VI +L E + + SGGKDS + +L++L + DL +SIDEG++GYR +
Sbjct: 18 EVIDEYKLIDPNELVVVALSGGKDSVLTLHILADLMGELEF--DLVAVSIDEGVAGYRSE 75
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
++ + N G+ L S+KD +G+ +D++ + +++C CGVFRRQ L++ + L
Sbjct: 76 GVEAARLNCESLGIKLVEGSFKDEFGFKLDDLHGM--YQSSCIPCGVFRRQLLNKISHQL 133
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIM 228
DK+ATGHN DD ++ L+++ + +I R + + +PR KP T+EK++
Sbjct: 134 GADKLATGHNLDDEIQSFLMSLAKAEIRRFYKFGPKLDKIHPDMVPRIKPLWKTHEKDVG 193
Query: 229 FTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKS-GENFRISTSTK 287
+A ++ EC YS + R + ++ LE RP L ++KS ++F+ K
Sbjct: 194 I-WAVLNNIEVHFAECPYSATSLRSKIKGYLNQLEEKRPGTKLSMLKSFSKSFKF--EKK 250
Query: 288 MPEQGTCERCGYISSQKWCKACVLLEGLN 316
+ G C CG SS C AC ++ +N
Sbjct: 251 DVQMGVCSLCGEPSSLDVCMACEMMAEIN 279
>gi|448498638|ref|ZP_21610924.1| PP-loop domain protein [Halorubrum coriense DSM 10284]
gi|445698387|gb|ELZ50432.1| PP-loop domain protein [Halorubrum coriense DSM 10284]
Length = 326
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+R IG SGGKDS L +L ++ R + +++ L+I EGI GYRD S+
Sbjct: 54 DRWVIGLSGGKDSVALTTILDDVFGR-DPRVEMLALTIHEGIEGYRDASVDACVELADDL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
+ ++VSY++ + MD++V+ C +CGVFRR L+ A+ DK+ TGHN
Sbjct: 113 SMRHELVSYEEEFDVRMDDVVEDDPENMAACAYCGVFRRDLLENYAAEFDADKLLTGHNL 172
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAY 233
DD A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 173 DDEAQTAMMNFLEGDVRQVAKHFDASLGPFDERGDTDAFVPRAKPLRDVPEKEIAL-YCH 231
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI----------S 283
+ L EC ++ AYRG + I LE P A I+ E
Sbjct: 232 ARDLPTHMAECPHAEEAYRGEIQSTIHALEENHPGARHSIMAGYEELSALAADAYRGDGD 291
Query: 284 TSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
+ P CERCG +S+ C+ C LLE +
Sbjct: 292 EGDENPGLSECERCGSQTSRDVCRKCRLLESI 323
>gi|118431097|ref|NP_147309.2| hypothetical protein APE_0537.1 [Aeropyrum pernix K1]
gi|116062423|dbj|BAA79504.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 338
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 153/312 (49%), Gaps = 19/312 (6%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + + T ++CRECF E + + + + GE + +G SGGKDS
Sbjct: 5 VCDVCGVRRAVVLQRHTGRRLCRECFREDIVGRVRREVERWGMIGPGETVLLGLSGGKDS 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VL LSE+ L +SI EGI GY R+ ++ ++R G+ + + S ++
Sbjct: 65 YVLLDALSEIVGPSR----LVAVSIVEGIPGYNREGDIEKIRRVAAARGVDVIVTSIREY 120
Query: 134 YGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
G ++ EI + CT+CG+ RR+ L A L K+AT HN DD A+T ++
Sbjct: 121 VGASLYEIYSRARGRGAGHAACTYCGISRRRILALYARLYGAHKVATAHNLDDEAQTAIV 180
Query: 190 NILRGD-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-- 246
N LRGD + L L +G + +PR KP + YE E +Y R EC +
Sbjct: 181 NFLRGDWVGMLKTHPLYRSGGEDLVPRIKPLRKVYEWETA-SYVVLHRYPIQEAECPFIN 239
Query: 247 -SPNAYRGFAREFIKDLERLRPRAILDII-KSGENFR-ISTSTKMPEQGTCERCGYISSQ 303
+P R R ++ LE P +L ++ + E R ++ + K G CERCG +S
Sbjct: 240 MNPT-LRARVRTALRVLEERSPGTLLRMMERLDEELRPLAQAMKPSSLGRCERCGEPTSP 298
Query: 304 K--WCKACVLLE 313
K CK C LLE
Sbjct: 299 KRRLCKLCELLE 310
>gi|448303469|ref|ZP_21493418.1| PP-loop domain protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445593254|gb|ELY47432.1| PP-loop domain protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 319
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF------KAGERIAIGAS 69
C+ C + +A + + +C + F E E+ + + + + L + + IG S
Sbjct: 3 CNRCPE-EAVMHAAYSGAHLCADHFRESVEKRVRRRVRRDDLVPHDATPETPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD SL+ + ++VS
Sbjct: 62 GGKDSVVLTQILHD-TFSDDPRIELVGLTIHEGIEGYRDKSLEACLDLTDDLEIRHEVVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ +G MDE+V+ C +CGVFRR L + A L+ D + TGHN DD A++ L
Sbjct: 121 YEEEFGVRMDEVVEDDPENMAACAYCGVFRRDLLSKYADELEADLLLTGHNLDDEAQSAL 180
Query: 189 LNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G +D +PR KP + EKE+ YA+ L
Sbjct: 181 MNFLEGDVEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDVPEKEVAL-YAHLNDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM-----PEQGTCER 296
TEC +S AYRG ++ + LE P I+ E S + + C
Sbjct: 240 TECPHSSEAYRGEIQQLLYGLEENHPGTRHSILSGYEELAGILSDEFSGDDGADLQDCVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG +++ C+ C LLE L
Sbjct: 300 CGSTTTRDICRKCSLLESL 318
>gi|307596367|ref|YP_003902684.1| PP-loop domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551568|gb|ADN51633.1| PP-loop domain protein [Vulcanisaeta distributa DSM 14429]
Length = 393
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R+A ++ P +C+E F E + + + I +L + G+ + + SGGKDS+
Sbjct: 70 CGICG-REAYVRIPYAKLTLCKEHFMEFIVKRVRRTIEEYKLIRRGDLVLVAVSGGKDSS 128
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ VLS L R + D+ ID+GI GY D + V+ + +PL I ++K++ G
Sbjct: 129 TMLHVLSTL--RDSLKFDIVAYHIDQGIPGYSDKARSAVEELARRLNVPLIISTFKEMLG 186
Query: 136 WTMDEIVKVIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
++K G+K+ C+ CG+ RR + + A L IATGH+ADDIA L +L
Sbjct: 187 VDQPTLIK--GMKSRRPPCSVCGIIRRYSYNALAMELNASSIATGHHADDIASYALKAVL 244
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP-NAY 251
D L++ T +G + +P YEKE + YA + + + C + P N
Sbjct: 245 THDYQSLTKLLPKTEPFEGAVAHIRPLYEIYEKETLL-YALASEIPFTACPCPFRPRNTL 303
Query: 252 RGFAREFIKDLERLRPRAILDIIKS-GENFRI--STSTKMPEQGTCERCGYISSQKWCKA 308
+EF+ +LE P L +K + +I + PE TC+ CG SS C
Sbjct: 304 DDHIKEFLNNLETRHPGIKLSFLKGLVRDVKILGKVVEENPEMHTCKVCGLASSGDVCSF 363
Query: 309 C 309
C
Sbjct: 364 C 364
>gi|389861274|ref|YP_006363514.1| PP-loop domain-containing protein [Thermogladius cellulolyticus
1633]
gi|388526178|gb|AFK51376.1| PP-loop domain protein [Thermogladius cellulolyticus 1633]
Length = 312
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
CR+ F E FE ++ + I ++ E I + SGGKDS L + L +++++ N G +
Sbjct: 12 CRQHFIEYFERKVKKTIRKYRMLGKTEHIVVAVSGGKDSMALLYFLWKMSKK-NPGWRVS 70
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV---KVIGLKN-NC 151
L +DEGI GYR+ ++ R + G+P KI S+K+ +G T+DEIV + GL C
Sbjct: 71 ALIVDEGIRGYREYTIANFLRVNERLGVPYKIASFKEYFGMTLDEIVEEGRRRGLPYLPC 130
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT--TGE 209
+CGVFRR L++ A + +AT HN DD+ +T ++N+ + + +L+R +T
Sbjct: 131 AYCGVFRRYLLNKVAREMGGTVLATAHNMDDVVQTFIMNLAKDTLDKLARLAPVTGIASH 190
Query: 210 DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA 269
+ + R KPF EKE ++ +C Y+ R R+ I +LE +P
Sbjct: 191 EKFVRRIKPFIEVTEKETSIYALLNGLIEPEYHKCPYAEFNVRFKIRKMINELEEAQPGT 250
Query: 270 ILDIIKSGENF--RISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
++ S + + ++ E TC+ CG SS C+AC GL
Sbjct: 251 KNSLLNSYLSIVRLLGEKRQVGEVKTCKICGEPSSHDVCRACQFRIGL 298
>gi|433639340|ref|YP_007285100.1| TIGR00269 family protein [Halovivax ruber XH-70]
gi|433291144|gb|AGB16967.1| TIGR00269 family protein [Halovivax ruber XH-70]
Length = 321
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 132/265 (49%), Gaps = 17/265 (6%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L + + ++L L+I EGI GYRD S+ +
Sbjct: 58 IGLSGGKDSVVLTQILHD-TFADDPRIELVGLTIHEGIEGYRDKSVDACVELTADLDIRH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY+D +G MD++V+ C +CGVFRR L R A L D + TGHN DD A
Sbjct: 117 ELVSYEDEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSRYAEELGADLLFTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTG-------EDGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
+T L+N L GD+ ++++ + G +D + R KP + EKE+ YA+ L
Sbjct: 177 QTALMNFLEGDVGQIAKHFDASLGPLPDREDQDDFVARAKPLRDVPEKEVAL-YAHLNDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG----- 292
TEC ++ AYRG + + DLE P I+ E +T+ E G
Sbjct: 236 PAHITECPHASEAYRGEIQGLLYDLEERHPGTRHSIMAGYEELADVAATEYGEDGDVELT 295
Query: 293 TCERCGYISSQKW--CKACVLLEGL 315
C +CG +S C+ C LL+ L
Sbjct: 296 DCPQCGSTTSVTGDRCRKCTLLDAL 320
>gi|15679197|ref|NP_276314.1| hypothetical protein MTH1186 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622294|gb|AAB85675.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 278
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 136/272 (50%), Gaps = 17/272 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I +I G++L K GE IA+ SGGKDS + LS+L R + +L +++DEGI GYR
Sbjct: 14 IRGLIEGHELIKPGEHIAVALSGGKDSVLTLHALSDL--RSDLDFELTAITVDEGIGGYR 71
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ + + N G+ L S++D + + +D + + C CGVFRR L+R A
Sbjct: 72 SEGVMVARENAELLGVELIERSFRDEFNFELDSVTD--RFSSPCIPCGVFRRWILNRTAR 129
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKE 226
+ KIATGHN DD ++ ++++ RGD+ + S+ + +PR KP T E E
Sbjct: 130 EIGASKIATGHNMDDEIQSFIMSLARGDVRKFSKFGPELQRIHPAMVPRIKPLWSTPESE 189
Query: 227 IMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST 286
+ +A + C YS + R R+F+ LE + L +++S + T
Sbjct: 190 VRL-WAVLNDVKVHLDSCPYSDLSMRSRIRDFLNHLESEKQGVKLRVMES------LSRT 242
Query: 287 KMPEQGT-----CERCGYISSQKWCKACVLLE 313
+P T C RCG SS CKAC LE
Sbjct: 243 FLPLSETEGLRECLRCGEPSSGDKCKACEFLE 274
>gi|448369041|ref|ZP_21555808.1| PP-loop domain-containing protein [Natrialba aegyptia DSM 13077]
gi|445651584|gb|ELZ04492.1| PP-loop domain-containing protein [Natrialba aegyptia DSM 13077]
Length = 319
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+Q +A + + +C + F E + + + I + L + IG S
Sbjct: 3 CNRCDQ-EAVMHAAYSGSHLCADHFRESVAKRVRRRIRRDDLVPQDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ G+ ++VS
Sbjct: 62 GGKDSVVLTQLLHD-TFDDDPRIELVGLTIHEGIEGYRDKSVDACVELTDDLGIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ED +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + +LE P II E I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LL+ L
Sbjct: 300 CGSTTTREVCRKCSLLDAL 318
>gi|379003663|ref|YP_005259335.1| hypothetical protein Pogu_0701 [Pyrobaculum oguniense TE7]
gi|375159116|gb|AFA38728.1| TIGR00269 family protein [Pyrobaculum oguniense TE7]
Length = 329
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 15/311 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +R A R + E++C C ++ E ++ + I +L G+ +A+ SGGKDS
Sbjct: 4 LCTRCGRRPAQYFRAVSGERLCLRCLFQSVERKVLETIRRERLIVPGDYVAVAVSGGKDS 63
Query: 75 TVLAFVLSELNRR---HNYGLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIV 128
VL +L R N ++ F +++EG YR V+ ++G+ +
Sbjct: 64 LVLLHILGSFKERGLLRNVKMEAF--TVNEGHPYSCFYRMSRRDYVRELAARFGIEYNVY 121
Query: 129 SYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+KD +G T E+ + + + CT GV RR+ ++ KIAT HN DD A
Sbjct: 122 HFKDFFGVTALELSERLAKAGHEVHMCTIDGVLRRRLMNVVGRRRGWTKIATAHNLDDEA 181
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
+TVL+N+L G+++R + + E+ IPR KP KY E+E+ YAY+ + E
Sbjct: 182 QTVLMNVLMGNLSRFAYYGVYEDAEEKDLIPRIKPMKYIREEEVAL-YAYYHGIPLMELE 240
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGTCERCGYISS 302
C Y R + + + ER P +++ GE R S E C CG S+
Sbjct: 241 CPYVVANPRYDLKFTLAEWEREMPSVKYNLVSFGEKLARALRSRPAAELKRCRYCGAASA 300
Query: 303 QKWCKACVLLE 313
++ C+ C L E
Sbjct: 301 REVCRVCELFE 311
>gi|307594196|ref|YP_003900513.1| PP-loop domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549397|gb|ADN49462.1| PP-loop domain protein [Vulcanisaeta distributa DSM 14429]
Length = 338
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 15/311 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ C +R A R + E++C C + E+ + + I +L +RI I SGGKDS
Sbjct: 5 MCTRCGRRPANYYRVSSGEKLCLNCLFRSIEDTVLRTIRKYRLISDDDRIGIAISGGKDS 64
Query: 75 TVLAFVLSELNRRHNY--GLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVS 129
L ++L + R+ ++L SI+EG YR + V++ ++ +P ++ +
Sbjct: 65 LTLMYLLGKFRRQGKIPRNVELIAFSINEGHPYSCFYRMARVDYVQKLSEEFNIPYRVYT 124
Query: 130 YKDLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
+K+L+G T +I + K + CT GV RR+A++ L + KIATGHN DD ++
Sbjct: 125 FKELFGVTATDIAHGLWSKGINVHMCTIDGVLRRRAMNIIGRQLGLTKIATGHNLDDESQ 184
Query: 186 TVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
TVLLN+L D+ R + +G IPR KP ++ E+EI YAY+ + EC
Sbjct: 185 TVLLNVLSNDLDRFAWFGPRPEIDREGFIPRIKPLRFVREEEIAL-YAYYHGIPLMELEC 243
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGE---NFRISTSTKMPEQGTCERCGYIS 301
+ + R + + ER P ++ G+ N + +P + C+ CG +
Sbjct: 244 PFVYSNPRYELKFTLAHWERDNPNVKFSLVSFGDSLANLMGEKAVNVPLK-RCKYCGEPT 302
Query: 302 SQKWCKACVLL 312
S C+ C L+
Sbjct: 303 SGDVCRVCELM 313
>gi|448348817|ref|ZP_21537665.1| PP-loop domain-containing protein [Natrialba taiwanensis DSM 12281]
gi|445642478|gb|ELY95546.1| PP-loop domain-containing protein [Natrialba taiwanensis DSM 12281]
Length = 319
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+Q +A + + +C + F E + + + I + L + IG S
Sbjct: 3 CNRCDQ-EAVMHAAYSGSHLCADHFRESVAKRVRRRIRRDDLVPQDATPENPQTWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL +L + + ++L L+I EGI GYRD S+ + ++VS
Sbjct: 62 GGKDSVVLTQLLHD-TFDDDPRIELVGLTIHEGIEGYRDKSVDACVELTDDLDIRHELVS 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y + +G MD++V+ C +CGVFRR L A L+ D + TGHN DD A+T L
Sbjct: 121 YAEEFGVRMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTAL 180
Query: 189 LNILRGDIARLSRCTLITTG-----EDGP--IPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+N L GD+ ++++ + G ED +PR KP + EKE+ YA+ + L
Sbjct: 181 MNFLEGDVEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVAL-YAHLEDLPAHI 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF-RISTSTKMPEQGT----CER 296
TEC ++ AYRG ++ + +LE P II E I+ + G C
Sbjct: 240 TECPHASEAYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVE 299
Query: 297 CGYISSQKWCKACVLLEGL 315
CG ++++ C+ C LLE L
Sbjct: 300 CGSTTTREVCRKCSLLEAL 318
>gi|148643088|ref|YP_001273601.1| ATPase [Methanobrevibacter smithii ATCC 35061]
gi|222445325|ref|ZP_03607840.1| hypothetical protein METSMIALI_00953 [Methanobrevibacter smithii
DSM 2375]
gi|261350114|ref|ZP_05975531.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148552105|gb|ABQ87233.1| predicted ATPase, PP-loop family [Methanobrevibacter smithii ATCC
35061]
gi|222434890|gb|EEE42055.1| TIGR00269 family protein [Methanobrevibacter smithii DSM 2375]
gi|288860900|gb|EFC93198.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 288
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNY-GL 92
Q+ ++ F + I+ +I L E IA+ SGGKDS + L L NY
Sbjct: 3 QLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVL---TLHALKNYQNYLDF 59
Query: 93 DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 152
DL +S+DEGI GYR + N + + L S+K G+ +D+I G K+ C
Sbjct: 60 DLVAVSVDEGIEGYRQHGIDAAIDNAEKLDVKLVQKSFKIEEGFALDDIYS--GFKSACI 117
Query: 153 FCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDG 211
CGVFRR L++ A L DKIATGHN DD ++ L++ RGD+ + S+ +
Sbjct: 118 PCGVFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGDLIKFSKFGPELDVIHPK 177
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAIL 271
IPR KP T EKE+ T+A ++ EC YS + R +EF+ + E + P
Sbjct: 178 LIPRIKPLWNTPEKEVG-TWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKN 236
Query: 272 DIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
+I++S + S C CG +S CKAC L
Sbjct: 237 NIMESFQKILTFESDIPSNLNECRLCGEPTSSDICKACEL 276
>gi|294496034|ref|YP_003542527.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
gi|292667033|gb|ADE36882.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
Length = 305
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 16/314 (5%)
Query: 3 VAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGE 62
+AE K++ C CN +A + +P + +C++ F E E ++ I N E
Sbjct: 1 MAEDKTR------CMKCNH-EAIIYQPYSGMHLCKKHFSEDVERKVKLTIRKNYNIGKNE 53
Query: 63 RIAIGASGGKDSTVLAFVLSEL--NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQ 120
+IA+ SGGKDS V ++L+++ RR L+L +++DEGIS YR+ S++ ++
Sbjct: 54 KIAVALSGGKDSCVALYILNKIFGKRR---DLELVAITVDEGISVYRERSIEYARKLTSD 110
Query: 121 YGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
G+ I S+ D Y ++DE+ + C++CGV R+ ++R A + ++ TGHN
Sbjct: 111 IGVKHLIHSFADEYDTSLDELAAKERVHGACSYCGVLRKSLVNRIALDIGAKRLVTGHNL 170
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
DD A+T+++N L GD+ R+ R + E G + R KP + E E+ YA +
Sbjct: 171 DDEAQTIMMNHLGGDVERMIRLSPPRELE-GLVLRAKPLRKIPENEVEL-YAKVNDIPVD 228
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMP--EQGTCERCG 298
+ C Y A R R + D E+ P + K + + + P E C CG
Sbjct: 229 ISLCPYKHEALRNEVRLMLDDFEQRHPGTKYSLQKGFDKMVGILAKEFPQAEIKKCTICG 288
Query: 299 YISSQKWCKACVLL 312
+ C+AC LL
Sbjct: 289 QACTTDVCQACRLL 302
>gi|305662530|ref|YP_003858818.1| PP-loop domain-containing protein [Ignisphaera aggregans DSM 17230]
gi|304377099|gb|ADM26938.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
Length = 319
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 19/316 (6%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C + A + T ++C+ECF + + I L ++I +G SGGKD
Sbjct: 5 RLCDVCGNKPAVFLQLHTGRRLCKECFINDLKNRVVNYIRKYSLLNHNDKILVGLSGGKD 64
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKD 132
S L +L E++ + L I+EGI+GY R++ +K ++ + K
Sbjct: 65 SYTLFKILLEIHD----PAKIIGLMIEEGINGYNREEQYVFIKNICKEFNVDCIKTDLKR 120
Query: 133 LYGWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+++D+ + + K+ CT+CG+ RR+ L+ A + VDK+ATGHN DD +T +
Sbjct: 121 ELGYSVDDFMYLQHRKSLKFSACTYCGIARRRVLNYYARIYNVDKVATGHNLDDEVQTYI 180
Query: 189 LNILRGDIARLSRCTLITTGED-GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY- 246
+NILRGDI RL + ++ + R KP + YE E F +AY + + TEC Y
Sbjct: 181 INILRGDIMRLVQLHPLSEVHSVSLVKRIKPLRIIYEYETAF-FAYLEHYHFQETECPYI 239
Query: 247 -SPNAYRGFAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYIS 301
R RE + LE P R I I K E + IS+ + E C CG +
Sbjct: 240 SEEPTLRVRVRELLYSLENRYPGIQLRFIEYIDKILEPYVISSRYRNIELPRCINCGEPT 299
Query: 302 SQK--WCKACVLLEGL 315
S CK C L+ L
Sbjct: 300 SPNRLLCKLCELMNLL 315
>gi|448493015|ref|ZP_21608995.1| PP-loop domain protein [Halorubrum californiensis DSM 19288]
gi|445690778|gb|ELZ42987.1| PP-loop domain protein [Halorubrum californiensis DSM 19288]
Length = 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 35/284 (12%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD S+ +
Sbjct: 55 RWVIGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDASVDACVELADELS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
L ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 LRHELVSYEEEFDVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI------------ 282
+ L EC ++ AYRG + I +LE P A I+ E
Sbjct: 233 RDLPTHMAECPHAEEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGD 292
Query: 283 ----------STSTKMPEQGTCERCGYISSQKWCKACVLLEGLN 316
S S+ + E CERCG +S+ C+ C LL+ +
Sbjct: 293 DADGDDAGGDSESSALRE---CERCGSKTSRDVCRKCRLLDSIE 333
>gi|238568893|ref|XP_002386526.1| hypothetical protein MPER_15186 [Moniliophthora perniciosa FA553]
gi|215438746|gb|EEB87456.1| hypothetical protein MPER_15186 [Moniliophthora perniciosa FA553]
Length = 118
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK--M 288
YAYFKRLDYFSTECIYSP+AYRG AR F+KDLE RP AI+DII SGE F + + M
Sbjct: 2 YAYFKRLDYFSTECIYSPDAYRGHARTFLKDLEAARPSAIIDIIHSGEAFEVREEVREGM 61
Query: 289 PEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVR 326
Q TC+RCGY+SS CKAC LLEGL RG+ GI +
Sbjct: 62 KVQQTCKRCGYMSSNDLCKACTLLEGLERGMAGSGISK 99
>gi|325968454|ref|YP_004244646.1| PP-loop domain-containing protein [Vulcanisaeta moutnovskia 768-28]
gi|323707657|gb|ADY01144.1| PP-loop domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 338
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 13/310 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C+ C +R A R + E++C C + E+ + + I +L G++I I SGGKDS
Sbjct: 5 MCTRCGRRPANYYRVSSGEKLCFNCLFRSIEDTVIKTIRRYRLINEGDKIGIAISGGKDS 64
Query: 75 TVLAFVLSELNRRHNY--GLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVS 129
L ++L + ++ ++L SI+EG YR V++ +Y +P K+ +
Sbjct: 65 LTLMYLLGKFRKQGKLPKNVELMAFSINEGHPYSCFYRMARSDYVQKLSEEYDIPYKVYT 124
Query: 130 YKDLYGWTMDEIVKVIGLK----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
+K+L+G T ++ + K + CT GV RR+A++ L + KIATGHN DD A+
Sbjct: 125 FKELFGVTATDVAHGLWSKGINVHMCTIDGVLRRRAMNIIGHKLGLTKIATGHNLDDEAQ 184
Query: 186 TVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
TVLLN+L D+ R + +G IPR KP ++ E+EI YA++ + EC
Sbjct: 185 TVLLNVLSNDLDRFAWFGPKPEIDREGFIPRIKPLRFVREEEIAI-YAHYHGIPLMELEC 243
Query: 245 IYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT--CERCGYISS 302
+ + R + + ER P ++ G++ S K C+ CG +S
Sbjct: 244 PFVYSNPRYELKFTLARWERDNPNIKYSLVAFGDSLAKLMSDKAVRTPLRKCKYCGQPTS 303
Query: 303 QKWCKACVLL 312
C+ C L+
Sbjct: 304 GDVCRVCELM 313
>gi|448504337|ref|ZP_21613954.1| PP-loop domain protein [Halorubrum distributum JCM 9100]
gi|448522022|ref|ZP_21618287.1| PP-loop domain protein [Halorubrum distributum JCM 10118]
gi|445702218|gb|ELZ54178.1| PP-loop domain protein [Halorubrum distributum JCM 9100]
gi|445702296|gb|ELZ54250.1| PP-loop domain protein [Halorubrum distributum JCM 10118]
Length = 333
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 26/279 (9%)
Query: 62 ERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQY 121
+R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD S+ +
Sbjct: 54 DRWVIGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDASVDACVELADEL 112
Query: 122 GLPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNA 180
L ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN
Sbjct: 113 SLRHELVSYEEEFDVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNL 172
Query: 181 DDIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAY 233
DD A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 173 DDEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIAL-YCH 231
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ L EC ++ AYRG + I +LE P A I+ E +
Sbjct: 232 VRDLPTHMAECPHAEEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDG 291
Query: 294 ----------------CERCGYISSQKWCKACVLLEGLN 316
CERCG +S+ C+ C LL+ +
Sbjct: 292 DGAGDEDDGEDSALRECERCGSKTSRDVCRKCRLLDSIE 330
>gi|374852304|dbj|BAL55240.1| hypothetical conserved protein [uncultured crenarchaeote]
Length = 248
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 14/255 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
+ SGGKDS L +VL ++ +R L +++DEGI GYRD++L+ V+ +PL
Sbjct: 1 MAVSGGKDSLSLLYVLKKIEKRFPRA-GLVAVTVDEGIEGYRDEALEYVEEVTRMLEVPL 59
Query: 126 KIVSYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
S+++ +G ++ EIV +++ C+ CG RR+A++ A IAT H D
Sbjct: 60 YKTSFEEAFGKSLSEIVASKQFRSSGLAACSVCGPLRRRAINIAAKRAGATVIATAHTLD 119
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYF 240
D+ +T L RG++ + I +GP IPR PF+ T E+E++F YAY + +
Sbjct: 120 DVVQTYFLKTFRGELG----TSEIGLRLEGPFIPRVAPFRLTPEREVVF-YAYLHNIPFQ 174
Query: 241 STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYI 300
S C + + R R F+ + + P ++ ++S F +T+ Q C CG
Sbjct: 175 SQVCPNAATSMRNMIRRFLAEFDERYPGSLFAALRS---FEKTTTLGKKMQRVCSYCGEP 231
Query: 301 SSQKWCKACVLLEGL 315
SS++ C+ C L + L
Sbjct: 232 SSRELCRVCELTQTL 246
>gi|145591717|ref|YP_001153719.1| PP-loop domain-containing protein [Pyrobaculum arsenaticum DSM
13514]
gi|145283485|gb|ABP51067.1| PP-loop domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 332
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 149/311 (47%), Gaps = 15/311 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC+ C +R A R + E++C C ++ E ++ + I +L G+ +A+ SGGKDS
Sbjct: 7 LCTRCGRRPAQYFRAVSGERLCLRCLFQSVERKVLETIRRERLIVPGDYVAVAVSGGKDS 66
Query: 75 TVLAFVLSELNRR---HNYGLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIV 128
VL +L R + ++ F +++EG YR V+ ++G+ +
Sbjct: 67 LVLLHILGSFKERGLLRDVKMEAF--TVNEGHPYSCFYRMSRRDYVRELAARFGIEYNVY 124
Query: 129 SYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+KD +G T E+ + + + CT GV RR+ ++ KIAT HN DD A
Sbjct: 125 HFKDFFGVTAQELSERLAKAGHEVHMCTIDGVLRRRLMNVVGRRRGWTKIATAHNLDDEA 184
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
+TVL+N+L G+++R + + E+ IPR KP KY E+E+ YAY+ + E
Sbjct: 185 QTVLMNVLMGNLSRFAYYGVYEDAEEKDLIPRIKPMKYIREEEVAL-YAYYHGIPLMELE 243
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK-MPEQGTCERCGYISS 302
C Y R + + + ER P +++ GE + + E C CG S+
Sbjct: 244 CPYVVANPRYDLKFTLAEWEREMPSVKYNLVSFGEKLASALRGRPAAELKRCRYCGAASA 303
Query: 303 QKWCKACVLLE 313
++ C+ C L E
Sbjct: 304 REVCRVCELFE 314
>gi|385773506|ref|YP_005646072.1| PP-loop domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|385776131|ref|YP_005648699.1| PP-loop domain-containing protein [Sulfolobus islandicus REY15A]
gi|323474879|gb|ADX85485.1| PP-loop domain protein [Sulfolobus islandicus REY15A]
gi|323477620|gb|ADX82858.1| PP-loop domain protein [Sulfolobus islandicus HVE10/4]
Length = 323
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 157/316 (49%), Gaps = 29/316 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + + T ++C+ECF E + + +L + +I + SGGKDS
Sbjct: 2 ICDNCKTREAVVLQTHTGRKLCKECFMEDVRKRVKLEAQKQELVNSN-KILLAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA LS+ L +I+EGI GY R + ++ ++ G+ L +K+
Sbjct: 61 LVLADTLSQFINPSK----LIAFNINEGIRGYNRSEDVKKLEEYLKDLGIELIKSGFKEE 116
Query: 134 YGWTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+++DE+++ LK N CTFCG FRR+ ++ + D +ATGHN DD +T++
Sbjct: 117 VGFSLDEMLQA-SLKRNLNVSACTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTII 175
Query: 189 LNILRGDIARLSRC---TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
+N++RGD+ RL R LI + + + R KP + YE E YA+ K ++ TEC
Sbjct: 176 INLIRGDLLRLIRLGDKPLIVSSKF--VMRVKPLRKIYEWETTI-YAHLKGFEFQETECP 232
Query: 246 Y--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK-----MPEQGTCERCG 298
Y R RE + LE +P +L I++ + IS K E C CG
Sbjct: 233 YISQKPTLRAKVRELLYKLEEKKPGTLLRILEQFDE--ISEKLKKEHRLTSELPNCIICG 290
Query: 299 YISS--QKWCKACVLL 312
++ + CK C LL
Sbjct: 291 EPTTPGRTICKNCELL 306
>gi|227827811|ref|YP_002829591.1| PP-loop domain-containing protein [Sulfolobus islandicus M.14.25]
gi|227830521|ref|YP_002832301.1| PP-loop domain-containing protein [Sulfolobus islandicus L.S.2.15]
gi|229579334|ref|YP_002837732.1| PP-loop domain-containing protein [Sulfolobus islandicus Y.G.57.14]
gi|229581906|ref|YP_002840305.1| PP-loop domain-containing protein [Sulfolobus islandicus Y.N.15.51]
gi|284998016|ref|YP_003419783.1| PP-loop domain-containing protein [Sulfolobus islandicus L.D.8.5]
gi|227456969|gb|ACP35656.1| PP-loop domain protein [Sulfolobus islandicus L.S.2.15]
gi|227459607|gb|ACP38293.1| PP-loop domain protein [Sulfolobus islandicus M.14.25]
gi|228010048|gb|ACP45810.1| PP-loop domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228012622|gb|ACP48383.1| PP-loop domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445911|gb|ADB87413.1| PP-loop domain protein [Sulfolobus islandicus L.D.8.5]
Length = 323
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 157/316 (49%), Gaps = 29/316 (9%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + + T ++C+ECF E + + +L + +I + SGGKDS
Sbjct: 2 ICDNCKTREAVVLQTHTGRKLCKECFIEDVRKRVKLEAQKQELVNSN-KILLAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA LS+ L +I+EGI GY R + ++ ++ G+ L +K+
Sbjct: 61 LVLADTLSQFINPSK----LIAFNINEGIRGYNRSEDVKKLEEYLKDLGIELIKSGFKEE 116
Query: 134 YGWTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+++DE+++ LK N CTFCG FRR+ ++ + D +ATGHN DD +T++
Sbjct: 117 VGFSLDEMLQA-SLKRNLNVSACTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTII 175
Query: 189 LNILRGDIARLSRC---TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
+N++RGD+ RL R LI + + + R KP + YE E YA+ K ++ TEC
Sbjct: 176 INLIRGDLLRLIRLGDKPLIVSSKF--VMRVKPLRKIYEWETTI-YAHLKGFEFQETECP 232
Query: 246 Y--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK-----MPEQGTCERCG 298
Y R RE + LE +P +L I++ + IS K E C CG
Sbjct: 233 YISQKPTLRAKVRELLYKLEEKKPGTLLRILEQFDE--ISEKLKKEHRLTSELPNCIICG 290
Query: 299 YISS--QKWCKACVLL 312
++ + CK C LL
Sbjct: 291 EPTTPGRTICKNCELL 306
>gi|426389839|ref|XP_004061324.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Gorilla gorilla
gorilla]
Length = 248
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+
Sbjct: 66 VLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFG 123
Query: 135 GWTMDEIVK 143
GWTMD + +
Sbjct: 124 GWTMDAVAR 132
>gi|448481803|ref|ZP_21605118.1| PP-loop domain protein [Halorubrum arcis JCM 13916]
gi|445821502|gb|EMA71291.1| PP-loop domain protein [Halorubrum arcis JCM 13916]
Length = 333
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 26/275 (9%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS L +L ++ + + +++ L+I EGI GYRD S+ + L
Sbjct: 58 IGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDASVDACVELADELSLRH 116
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN DD A
Sbjct: 117 ELVSYEEEFDVRMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEA 176
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
+T ++N L GD+ ++++ + G D +PR KP + EKEI Y + + L
Sbjct: 177 QTAMMNFLEGDVRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIAL-YCHVRDL 235
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---- 293
EC ++ AYRG + I +LE P A I+ E +
Sbjct: 236 PTHMAECPHAEEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGDGAG 295
Query: 294 ------------CERCGYISSQKWCKACVLLEGLN 316
CERCG +S+ C+ C LL+ +
Sbjct: 296 DEDDGEGSALRECERCGSKTSRDVCRKCRLLDSIE 330
>gi|15897505|ref|NP_342110.1| hypothetical protein SSO0586 [Sulfolobus solfataricus P2]
gi|284174823|ref|ZP_06388792.1| hypothetical protein Ssol98_09246 [Sulfolobus solfataricus 98/2]
gi|384434112|ref|YP_005643470.1| PP-loop domain-containing protein [Sulfolobus solfataricus 98/2]
gi|6015886|emb|CAB57713.1| hypothetical protein [Sulfolobus solfataricus P2]
gi|13813752|gb|AAK40900.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602266|gb|ACX91869.1| PP-loop domain protein [Sulfolobus solfataricus 98/2]
Length = 323
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 159/314 (50%), Gaps = 25/314 (7%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + +P T ++C+ECF E + + ++ + +I + SGGKDS
Sbjct: 2 ICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSN-KILLAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA LS+ L +I+EGI GY R++ ++ ++ G+ L +K+
Sbjct: 61 LVLADTLSQFIHPSR----LIAFNINEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEE 116
Query: 134 YGWTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+++DE+++ LK CTFCG FRR+ ++ + D +ATGHN DD +T++
Sbjct: 117 VGFSLDEMLEA-SLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIV 175
Query: 189 LNILRGDIARLSRC---TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
+N++RGD+ RL R L+ + + + R KP + YE E YA+ K ++ TEC
Sbjct: 176 INLIRGDLLRLIRFGDKPLMVSSKF--VMRVKPLRKIYEWETTM-YAHLKGFEFQETECP 232
Query: 246 Y--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMP-EQGTCERCGYI 300
Y R R+ + LE +P +L I++ + +I ++ E C CG
Sbjct: 233 YISQKPTLRAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEP 292
Query: 301 SS--QKWCKACVLL 312
++ + CK C LL
Sbjct: 293 TTPGRMICKNCELL 306
>gi|401411003|ref|XP_003884949.1| PP-loop domain protein, related [Neospora caninum Liverpool]
gi|325119368|emb|CBZ54921.1| PP-loop domain protein, related [Neospora caninum Liverpool]
Length = 705
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 89/135 (65%), Gaps = 4/135 (2%)
Query: 149 NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
++CTFCG+FRRQA +RGA + D + TGHNADD AET L+NILRGD+ RL TG
Sbjct: 315 HSCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNILRGDVQRLPVSGAPLTG 374
Query: 209 E-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE-RL 265
+GP + R KP ++++E++ YA+F RLDYF+TEC YS AYRG R F L+
Sbjct: 375 SREGPSVMRVKPLLASFQREVVL-YAHFNRLDYFATECTYSGAAYRGLVRNFFSSLQDNQ 433
Query: 266 RPRAILDIIKSGENF 280
+ + ILD++ + N
Sbjct: 434 QQQRILDLLHAARNL 448
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +L R + + CR CF FE+++ I LF +G+++A+ SGGKDS
Sbjct: 102 CQFCGSPRVSLVRVASRLRSCRACFIRAFEDDVWAFIRRFSLFHSGQKVAVCVSGGKDSA 161
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VL VL LN R + GL L LL++DEGI GYRD +L VKRN Y LPL IVSY +LY
Sbjct: 162 VLLHVLHTLNVREHLGLSLHLLAVDEGIKGYRDQALAAVKRNSHVYNLPLHIVSYDNLYQ 221
Query: 135 GWTMDEIVK 143
GWTMD I +
Sbjct: 222 GWTMDRIAQ 230
>gi|374326060|ref|YP_005084260.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
gi|356641329|gb|AET32008.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
Length = 328
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 17/312 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C +R A R + E++C C + E+++ + I ++ G+ +A+ SGGKDS
Sbjct: 3 LCQRCGKRPAQYLRVVSGERLCLRCLFTSLEKKVLETIRREKMIIPGDYVAVAVSGGKDS 62
Query: 75 TVLAFVLSELNRRHNYGL----DLFLLSIDEGISG---YRDDSLQTVKRNEIQYGLPLKI 127
VL +L L R GL + +I+EG YR VK ++G+ +
Sbjct: 63 LVLLHILGRLRER---GLLKEVKMEAFTINEGHPYSCFYRMSRKDYVKEVASKFGVEYNV 119
Query: 128 VSYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
+KD++G T E+ + + + CT GV RR+A++ KIAT HN DD
Sbjct: 120 YHFKDIFGVTAMELSERLAKAGHEVHMCTIDGVLRRRAMNIIGKRRGWTKIATAHNLDDE 179
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFST 242
A+T L+N+L G+++R E+ IPR KP KY E+E+ YAY+ +
Sbjct: 180 AQTALMNVLMGNLSRFRWYGHYEDAEEKDLIPRIKPLKYVREEEVAL-YAYYHGVPLMEL 238
Query: 243 ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE-QGTCERCGYIS 301
EC Y R + + ++ER P ++ GE + P+ C C ++
Sbjct: 239 ECPYVVANPRYQLKFTLAEMEREMPTVKYSLVSFGEKLAKFLQAQPPQPMRRCRYCNSVT 298
Query: 302 SQKWCKACVLLE 313
S++ C+ C L E
Sbjct: 299 SREVCRVCELFE 310
>gi|237829747|ref|XP_002364171.1| PP-loop domain-containing protein [Toxoplasma gondii ME49]
gi|211961835|gb|EEA97030.1| PP-loop domain-containing protein [Toxoplasma gondii ME49]
gi|221507032|gb|EEE32636.1| PP-loop domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 672
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 90/139 (64%), Gaps = 4/139 (2%)
Query: 149 NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
++CTFCG+FRRQA +RGA + D + TGHNADD AET L+NILRGD+ RL TG
Sbjct: 301 HSCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNILRGDMQRLPVSGAPLTG 360
Query: 209 E-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE-RL 265
+GP + R KP +Y++E++ YA+F RLDYF+TEC YS AYRG R F+ L+
Sbjct: 361 SREGPSVMRVKPLLASYQREVVL-YAHFNRLDYFATECTYSGAAYRGLVRNFLSSLQDNQ 419
Query: 266 RPRAILDIIKSGENFRIST 284
+ +LD++ + + +
Sbjct: 420 HQQRVLDLLHAARKLWVPS 438
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +L R + + CR CF FE+++ I LF+ G+++A+ SGGKDS
Sbjct: 82 CQFCGSPRVSLLRVASRLRSCRACFVRAFEDDVSAFIRRFSLFQRGQKVAVCVSGGKDSA 141
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
VL VL LN R + GL L LL++DEGI GYRD +L V+RN Y LPL +VSY LY
Sbjct: 142 VLLHVLHTLNAREDLGLSLHLLAVDEGIKGYRDHALAAVRRNSEVYNLPLHVVSYASLYH 201
Query: 135 GWTMDEIVK 143
GWTMD I +
Sbjct: 202 GWTMDRIAQ 210
>gi|229585081|ref|YP_002843583.1| PP-loop domain-containing protein [Sulfolobus islandicus M.16.27]
gi|238619984|ref|YP_002914810.1| PP-loop domain-containing protein [Sulfolobus islandicus M.16.4]
gi|228020131|gb|ACP55538.1| PP-loop domain protein [Sulfolobus islandicus M.16.27]
gi|238381054|gb|ACR42142.1| PP-loop domain protein [Sulfolobus islandicus M.16.4]
Length = 323
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 27/315 (8%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C R+A + + T ++C+ECF E + + +L + +I + SGGKDS
Sbjct: 2 ICDNCKTREAVVLQTHTGRKLCKECFIEDVRKRVKLEAQKQELVNSN-KILLAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDL 133
VLA LS+ L +I+EGI GY R + ++ ++ G+ L +K+
Sbjct: 61 LVLADTLSQFINPSK----LIAFNINEGIRGYNRSEDVKKLEEYLKDLGIELIKSGFKEE 116
Query: 134 YGWTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G+++DE+++ LK N CTFCG FRR+ ++ + D +ATGHN DD +T++
Sbjct: 117 VGFSLDEMLQA-SLKRNLNVSACTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTII 175
Query: 189 LNILRGDIARLSRC---TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECI 245
+N++RGD+ RL R LI + + + R KP + YE E YA+ K ++ TEC
Sbjct: 176 INLIRGDLLRLIRLGDKPLIVSSKF--VMRVKPLRKIYEWETTI-YAHLKGFEFQETECP 232
Query: 246 Y--SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF------RISTSTKMPEQGTCERC 297
Y R RE + LE +P +L I++ + ++++P CE
Sbjct: 233 YISQKPTLRAKVRELLYKLEEKKPGTLLRILEQFDEISEKLKKEHRLTSELPNCIICEE- 291
Query: 298 GYISSQKWCKACVLL 312
+ CK C LL
Sbjct: 292 PTTPGRTICKNCELL 306
>gi|304315308|ref|YP_003850455.1| ATPase [Methanothermobacter marburgensis str. Marburg]
gi|302588767|gb|ADL59142.1| predicted ATPase [Methanothermobacter marburgensis str. Marburg]
Length = 290
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 29/278 (10%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I ++ ++L + GE +A+ SGGKDS + VLS+L R +L +++DEGI GYR
Sbjct: 23 IRGLMESHKLVERGEHVAVALSGGKDSVLTLHVLSDL--REELDFELTAITVDEGIEGYR 80
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ + + N + L S++D + + ++++++ G ++ C CGVFRR L+R A
Sbjct: 81 GEGVLAARENARIRRVELIEKSFRDEFNFELEDVLE--GFRSPCIPCGVFRRWILNRTAR 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP---------IPRCKP 218
+ KIATGHN DD ++ ++++ RGD+ + S+ GP +PR KP
Sbjct: 139 EIGASKIATGHNMDDEVQSFIMSLARGDVRKFSKF--------GPKLQRIHPRMVPRIKP 190
Query: 219 FKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGE 278
T E+++ +A + + S C YS + R R+F+ +E P I+KS +
Sbjct: 191 LWSTPEEDVRL-WAELNDVKFHSAPCPYSSRSMRAGIRDFLNRIESDSPGVKEMIMKSLK 249
Query: 279 NFRISTSTKMPEQ---GTCERCGYISSQKWCKACVLLE 313
T + E G C CG +S CKAC LE
Sbjct: 250 ----VTFQPLAEDYGIGECSICGEPASGIKCKACEFLE 283
>gi|374725119|gb|EHR77199.1| putative tRNA(Ile)-lysidine synthase MesJ [uncultured marine group
II euryarchaeote]
Length = 336
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 25/321 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER---IAIGASGGK 72
C +C+ R A L++ + +C E + ++I + + QL +R I + SGGK
Sbjct: 20 CDSCS-RPAVLEQAYSGRILCNEHMAKSVRKKIAKEL-RQQLVLPKDRDTTIFVAISGGK 77
Query: 73 DSTVLAFVLSEL-NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
DS VL + +L R + + + ++DEGI GYR SL + + G+ VSY
Sbjct: 78 DSAVLLDSIVDLIGARPD--VRIVAGTVDEGIEGYRPPSLICAQELCDRLGVEFITVSYP 135
Query: 132 DLYGWTMDEIVKVIG--LKNN-------CTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
+L MDE+ I L++N C++CGVFRRQ ++ A + D IA GHN DD
Sbjct: 136 ELSFKEMDEVASRIPGLLESNPSAPRLPCSYCGVFRRQGINHLADRIGADIIALGHNLDD 195
Query: 183 IAETVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+A+TVL+N+ GD+ R R TT +G PR P ++ E+E+ YA + L
Sbjct: 196 MAQTVLMNMTNGDLDRTLRLAPHTTTVVEGMAPRIVPLRWIPEQEVHL-YALHRDLPLHH 254
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRA------ILDIIKSGENFRISTSTKMPEQGTCE 295
EC ++ A R RE + +E P + D IK+ N + + C
Sbjct: 255 EECPHAQGALRWRHREMVAQMEADSPGTRHGLLRMADNIKALRNRSPDDAPSLAPPTPCP 314
Query: 296 RCGYISSQKWCKACVLLEGLN 316
+C ++S CKAC LN
Sbjct: 315 KCSAMTSGSQCKACDFRALLN 335
>gi|339237997|ref|XP_003380553.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
gi|316976546|gb|EFV59823.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
Length = 159
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
+N+LRGD+ RL RC+ +GE G + RCKP ++KEI+ YA F LDYFST+C+Y+P
Sbjct: 1 MNVLRGDLNRLHRCSRPVSGEAGGLVRCKPLYRCFQKEIVL-YARFNNLDYFSTDCVYAP 59
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE---QGTCERCGYISSQKW 305
N+YR R+F+K LE +RP AILD+++SG+ + + + + C CG++SS
Sbjct: 60 NSYRAHVRDFVKRLELIRPLAILDVLRSGQAMALQATDRCRASTVRSRCSLCGFVSSGSV 119
Query: 306 CKACVLLEGLN 316
C AC LL+ LN
Sbjct: 120 CHACRLLKNLN 130
>gi|156937300|ref|YP_001435096.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566284|gb|ABU81689.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
Length = 304
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 31/312 (9%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +R A + + +C E F + E + + G +I + SGGKDS
Sbjct: 3 CAVCGKRVVA--KDYSGRPLCEEHFLQSVVERAEKELEG-----VNSKILLAVSGGKDSL 55
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISG-YRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VL V+++L DL ++ EG G YR Q KR + G+ +++K+L+
Sbjct: 56 VLMDVVAQLRDPK----DLVAATVVEGAPGGYRVKEAQVAKRFAEKLGIKHITITFKELF 111
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G +++E+V G + CT+CGVFRR+AL+ A L +ATGH DD A T LLN+LRG
Sbjct: 112 GKSLEEMV-AKGKLSPCTYCGVFRRRALEVLARRLGA-VVATGHTLDDEAHTALLNLLRG 169
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY--SPNAYR 252
L R + R KP + YE+E+ YAY K+ + S EC Y + R
Sbjct: 170 SWDDLLRLNAKS--------RIKPLRKVYEREVSI-YAYIKKFPFQSEECPYIVRRPSLR 220
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISS--QKWCKACV 310
G RE + + ER RP + K E F K + CERCG+ +S ++ CK C
Sbjct: 221 GRLREELFEYERERPGTLF---KWRERFEGLGEPKRRFK-LCERCGFPTSPNRRVCKVCE 276
Query: 311 LLEGLNRGLPKM 322
L E + +P++
Sbjct: 277 LAEEVGASVPRL 288
>gi|15789499|ref|NP_279323.1| hypothetical protein VNG0190C [Halobacterium sp. NRC-1]
gi|169235215|ref|YP_001688415.1| hypothetical protein OE1318F [Halobacterium salinarum R1]
gi|10579837|gb|AAG18803.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726281|emb|CAP13062.1| putative tRNA 2-thiolation protein [Halobacterium salinarum R1]
Length = 320
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 153/319 (47%), Gaps = 21/319 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG------ERIAIGAS 69
C+ C+ R A + + +C F + E + + I + + E IG S
Sbjct: 3 CTKCD-RDAVMHAAYSGAHLCEPHFLDSVERRVRRRIRTDNMLSPDTTPDDPETWVIGLS 61
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS VL ++ E R + ++L L+I EGI+GYRD+SL + ++V+
Sbjct: 62 GGKDSAVLTDLIEE-TFRDDPRVELIALTIHEGIAGYRDESLDACTTLAADRDIRHELVT 120
Query: 130 YKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
Y++ + MD++ L C +CGVFRR L + A DK+ TGHN DD AET L
Sbjct: 121 YREEFDVAMDDVADDDPLDMAPCAYCGVFRRDLLAKYADEYDADKLLTGHNLDDEAETAL 180
Query: 189 LNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+NIL G++ +++ + G D IPR KP + EKE+ YA + L
Sbjct: 181 MNILEGNVTQIATHFDASLGSFDDRAELDAMIPRAKPLRDIPEKEVAL-YAQLRDLPVHM 239
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR-IST---STKMPEQGTCERC 297
EC ++ ++R +E + +LE RP I+ E I+ +T + G C C
Sbjct: 240 AECPHASESFRSDLQEVLLELEDRRPGTRHSIMAGYEELAGIAADEYNTDDADVGECSDC 299
Query: 298 GYISSQKWCKACVLLEGLN 316
G +++ C+ C L++ +
Sbjct: 300 GAPTTRDRCRKCTLVDAVT 318
>gi|70607306|ref|YP_256176.1| ATP-binding protein [Sulfolobus acidocaldarius DSM 639]
gi|449067549|ref|YP_007434631.1| ATP binding protein [Sulfolobus acidocaldarius N8]
gi|449069823|ref|YP_007436904.1| ATP binding protein [Sulfolobus acidocaldarius Ron12/I]
gi|68567954|gb|AAY80883.1| ATP binding protein [Sulfolobus acidocaldarius DSM 639]
gi|449036057|gb|AGE71483.1| ATP binding protein [Sulfolobus acidocaldarius N8]
gi|449038331|gb|AGE73756.1| ATP binding protein [Sulfolobus acidocaldarius Ron12/I]
Length = 320
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 154/324 (47%), Gaps = 35/324 (10%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C R A + + +CR CF E + + + I L +A +I + SGGKDS
Sbjct: 3 CSLCGVRDAEIYQAHKGRSLCRYCFIEDIRDRVKREIERLGLSRAS-KIVLAVSGGKDSY 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VLA L+ L +I EGISGY R + + K + G+ L S++
Sbjct: 62 VLADTLASFIDHDK----LVAYNIIEGISGYNRVEQVIQFKNFLNELGIELIEDSFEKSV 117
Query: 135 GWTMDEIVKVIGLKN----NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
G+T+D++V +N CTFCG FRR+ ++ L D +ATGHN DD + ++LN
Sbjct: 118 GFTLDQMVANSKKRNLNVSACTFCGGFRRKLINTAGLKLNGDYVATGHNLDDEVQAIMLN 177
Query: 191 ILRGDIARLSRCTLITTGEDGPIP-------RCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
++RGD+ RL R D PI R KP + YE E YAY+K + E
Sbjct: 178 VIRGDLIRLIRFG------DKPIKLSSRFVLRVKPLRRIYEWETTM-YAYYKGYKFQEVE 230
Query: 244 CIYS--PNAYRGFAREFIKDLERLRPRAILDIIKS----GENFRISTSTKMPEQGTCERC 297
C Y R RE + LE RP +L I+ + E R +S K E C+ C
Sbjct: 231 CPYIELKPTLRAKVRELLYALEEKRPGTLLQILDTFDIIAERVRSGSSFK-DELPRCKIC 289
Query: 298 GYISS--QKWCKACVLLEGLNRGL 319
G +S ++ CK C LL +N GL
Sbjct: 290 GDPTSYGREICKNCELL--INSGL 311
>gi|257053471|ref|YP_003131304.1| PP-loop domain protein [Halorhabdus utahensis DSM 12940]
gi|256692234|gb|ACV12571.1| PP-loop domain protein [Halorhabdus utahensis DSM 12940]
Length = 321
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 66 IGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPL 125
IG SGGKDS VL +L+E + ++L LSI EGI GYRD+SL + L
Sbjct: 60 IGLSGGKDSVVLTQLLAE-TFAEDPRIELVALSIHEGIEGYRDESLDAAEALTDDLDLRH 118
Query: 126 KIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+ VSY + +G MD++V+ C +CGVFRR L R A D + TGHN DD A
Sbjct: 119 ETVSYAEAFGVRMDDVVEDDPENMAACAYCGVFRRDLLSRYADEYDADLLLTGHNLDDEA 178
Query: 185 ETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
ET L+N GD+ ++++ + G D +PR KP + EKE+ YA L
Sbjct: 179 ETALMNFFEGDVDQMAKHFDASLGPMPERSLTDKHVPRAKPLRDVPEKEVAL-YARLADL 237
Query: 238 DYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCER- 296
TEC ++ ++RG +E + +E P I+ E + +
Sbjct: 238 PAHITECPHASESFRGEIQELLYSMEDAHPGTRHSIMAGYEQLARYAAKRADADDGAYDA 297
Query: 297 ---CGYISSQKWCKACVLLEGL 315
CG ++ C+ C LL L
Sbjct: 298 CDTCGAPTTGGRCRKCQLLSAL 319
>gi|289192452|ref|YP_003458393.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
gi|288938902|gb|ADC69657.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
Length = 300
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 21/299 (7%)
Query: 16 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C++ LK PK +C+E F E FE+++ + I ++ E+I + SGGKD
Sbjct: 4 CKFCDKDSYIKLKSPKMY--LCKEHFVEYFEDKVKKSIEKYKMIDKDEKILVAVSGGKDG 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
A+VL +L G ++ L I+ GI G+ ++SL+ V + +PL +V+ KD+
Sbjct: 62 HAAAWVLKKL------GYNIELFHINLGIKGFSEESLKAVNELAEKLEVPLHVVNLKDIT 115
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TM++I C+ CG+ +R ++R D I TGHN DD +L NIL
Sbjct: 116 GKTMEDI-----RGKKCSICGITKRYLMNRFGYENGFDVIVTGHNLDDEVSFILNNILNW 170
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+I L++ + D + + K F + E+E++ YA + + Y + EC Y+ A
Sbjct: 171 NIRYLAKHEPVLPAHDKFLKKVKIF-FEIEEELILKYAEAENIPYTTVECKYAEKAITLK 229
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R ++ +LE+ RP + + +K+ F++ + CE CG S+ + C C
Sbjct: 230 HRAYLNELEKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRE--CEICGMTSAGRICSFC 286
>gi|15669670|ref|NP_248483.1| hypothetical protein MJ_1478 [Methanocaldococcus jannaschii DSM
2661]
gi|2501588|sp|Q58873.1|Y1478_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1478
gi|1592117|gb|AAB99482.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 303
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 21/299 (7%)
Query: 16 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C+++ LK PK +C+E F E FE ++ + I ++ E+I + SGGKD
Sbjct: 7 CKFCDKKSYIKLKSPKMY--LCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDG 64
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
A+VL +L G ++ L I+ GI G+ ++SL+ VK + +PL +V+ KD+
Sbjct: 65 HAAAWVLKKL------GYNIELFHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDIT 118
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TM++I C+ CG +R +++ D I TGHN DD +L N+
Sbjct: 119 GKTMEDI-----RGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+I L++ + D + + K F + E+E++ YA + + Y + EC Y+ A
Sbjct: 174 NIRYLAKHEPVLPAHDKFLKKVKIF-FEIEEELILKYAEAEEIPYTTVECKYAERAITLK 232
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R ++ +LE+ RP + + +K+ F++ + CE CG S+ K C C
Sbjct: 233 HRAYLNELEKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRE--CEVCGMTSAGKICSFC 289
>gi|15920850|ref|NP_376519.1| hypothetical protein ST0630 [Sulfolobus tokodaii str. 7]
gi|15621634|dbj|BAB65628.1| hypothetical protein STK_06300 [Sulfolobus tokodaii str. 7]
Length = 318
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 159/312 (50%), Gaps = 24/312 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS CN KA +K P + +C++ F E FE +++ ++F+ ++IA+ SGGKDST
Sbjct: 3 CSKCNN-KAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDST 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS---GYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
L ++ +L+ + G ++ ++ID GI Y S + +N G+ +IV K+
Sbjct: 62 TLLHLMKKLSEKK--GFEIIGINIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKE 119
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
YG+T+D+ I + C+ CG+ +R L A D I TGHN +D+A+ ++
Sbjct: 120 RYGFTIDDAKHKIK-RPVCSTCGLVKRYTLTEIAEEEGADTIVTGHNLNDMAQFIMAGYF 178
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS---P 248
GD+ L+R +IT E G + + KP YEKEI+ TYA K + + C ++
Sbjct: 179 NGDVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEIL-TYALVKGIPFLYDSCPHTFRVG 237
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTS-----TKMPEQGTCERCGYIS 301
A + R +++LE P +L ++ ENF +I + K E G C+ CG +
Sbjct: 238 GATQDTIRRKLEELEEAIPGYMLMLV---ENFINKIQPALKEKYIKEEEIGHCKICGRPT 294
Query: 302 SQ--KWCKACVL 311
++ + C C +
Sbjct: 295 TKDREICSFCAV 306
>gi|448424712|ref|ZP_21582568.1| PP-loop domain protein [Halorubrum terrestre JCM 10247]
gi|445681922|gb|ELZ34347.1| PP-loop domain protein [Halorubrum terrestre JCM 10247]
Length = 333
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 26/278 (9%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD S+ +
Sbjct: 55 RWVIGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDASVDACVELADELS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
L ++VSY++ + MD++V+ C +CGVFRR L++ A+ DK+ TGHN D
Sbjct: 114 LRHELVSYEEEFDVRMDDVVEDDPEDMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT- 293
+ L EC ++ AYRG + I +LE P A I+ E +
Sbjct: 233 RDLPTHMAECPHAEEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGD 292
Query: 294 ---------------CERCGYISSQKWCKACVLLEGLN 316
CERCG +S+ C+ C LL+ +
Sbjct: 293 GAGDEDDGEGSALRECERCGSKTSRDVCRKCRLLDSIE 330
>gi|84489110|ref|YP_447342.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|84372429|gb|ABC56699.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
F ++ + + + +L E+I IG SGGKDS + +L + + +L + I
Sbjct: 8 FNSYVKKNVFETLNDYKLINKNEKIMIGVSGGKDSILTLHMLYQYRQESGIDFELEAVCI 67
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
DEGI GYR+ +++ K N +PL I S+KD + + +D+I + K+ C CGV+RR
Sbjct: 68 DEGICGYREHGIESAKENCKNLDIPLTIASFKDEWNYNLDDIHNL--YKSTCMPCGVYRR 125
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKP 218
L++ + K DKIATGHN DD ++ L+ R D + + I D +PR KP
Sbjct: 126 YLLNKVSDSHKCDKIATGHNMDDEIQSFLMTFARNDQNKFPKFGPILNRIDKHMVPRIKP 185
Query: 219 FKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLR--PRAILDIIKS 276
EK++ + + EC YS + R + F+ LE + I + K
Sbjct: 186 LWQLPEKDVGI-WCIVNNIPIHDEECPYSVTSLRSDVKLFLNKLEENYGVKQNIFNSFK- 243
Query: 277 GENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
+ F+I E+ C+ CG ++++ C AC + E + L
Sbjct: 244 -KTFKIPQKEVHLER--CDICGQVTAKSPCNACKMTEEIKEIL 283
>gi|448450508|ref|ZP_21592327.1| PP-loop domain protein [Halorubrum litoreum JCM 13561]
gi|445811622|gb|EMA61625.1| PP-loop domain protein [Halorubrum litoreum JCM 13561]
Length = 333
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 26/278 (9%)
Query: 63 RIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG 122
R IG SGGKDS L +L ++ + + +++ L+I EGI GYRD S+ +
Sbjct: 55 RWVIGLSGGKDSVALTRILDDVFGK-DPRVEMLALTIHEGIEGYRDASVDACVELADELS 113
Query: 123 LPLKIVSYKDLYGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
L ++VSY++ + MD++V+ C +CGVFRR L+ A+ DK+ TGHN D
Sbjct: 114 LRHELVSYEEEFDVRMDDVVEDDPEDMAACAYCGVFRRDLLENYAAEFDADKLLTGHNLD 173
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGE-------DGPIPRCKPFKYTYEKEIMFTYAYF 234
D A+T ++N L GD+ ++++ + G D +PR KP + EKEI Y +
Sbjct: 174 DEAQTAMMNFLEGDVRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIAL-YCHV 232
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT- 293
+ L EC ++ AYRG + I +LE P A I+ E +
Sbjct: 233 RDLPTHMAECPHAEEAYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGD 292
Query: 294 ---------------CERCGYISSQKWCKACVLLEGLN 316
CERCG +S+ C+ C LL+ +
Sbjct: 293 DAGDEDDGEGSALRECERCGSKTSRDVCRKCRLLDSIE 330
>gi|312137453|ref|YP_004004790.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311225172|gb|ADP78028.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 297
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 139/267 (52%), Gaps = 6/267 (2%)
Query: 46 EEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISG 105
++I +V+ +L + G+ I++ SGGKDS + + L L N+ L+ IDEGI
Sbjct: 25 KKIRRVVKNYKLIENGDVISVALSGGKDSLLTLYALKNLQNEINFKLNAIF--IDEGIKN 82
Query: 106 YRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRG 165
YR ++L+ ++++ + + L S+K+ +G+ +DEI C CG+FRR L++
Sbjct: 83 YRKNALKYLRKHVKKLEVELIKKSFKEEFGFKVDEIKDYFD--TPCIPCGIFRRYLLNKT 140
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC-TLITTGEDGPIPRCKPFKYTYE 224
A + K+ATGHN DD ++ L++++RGD R + + IPR KP E
Sbjct: 141 AYEVGASKLATGHNLDDEIQSFLMSLVRGDTFRFYKFGPKLDRIHPKLIPRIKPLWEVSE 200
Query: 225 KEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
KE++ + ++ C YS ++R F+ ++E++ P +I+KS + +S
Sbjct: 201 KEVI-DWVVKNDIEVQMERCPYSKYSFRFKLMNFLNEIEKIEPGTKENIMKSFKKTFLSL 259
Query: 285 STKMPEQGTCERCGYISSQKWCKACVL 311
K + C+ C + SS + CK C L
Sbjct: 260 KKKDVKVVECKECFWPSSNELCKVCEL 286
>gi|383783739|ref|YP_005468306.1| ATPase, PPloop superfamily [Leptospirillum ferrooxidans C2-3]
gi|383082649|dbj|BAM06176.1| putative ATPase, PPloop superfamily [Leptospirillum ferrooxidans
C2-3]
Length = 319
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 13/300 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + P+ C +CF + +++ + I ++F+ G+RI + SGGKDS
Sbjct: 3 CRVC-KKKAVIAIPRHNTAFCADCFDKYLMDQVRKTIKEFRMFEPGDRILLAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L L LD+ +D GIS Y +S + + + G PL I + G
Sbjct: 62 ALWEILKRLE------LDVLGYHLDLGISEYSKESTEKTRAFAEKRGYPLIIEEIESETG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+ I + + C+ CG+ +R +R A +ATGHN DD A +L NIL
Sbjct: 116 ATLPVIAESTK-RPPCSACGLSKRHLFNRAARQHGCQVLATGHNLDDEASRLLGNILHWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L + + E G I + KP EKE M TYAY K +DY EC S +A + F
Sbjct: 175 DGYLEKQSPSLPAEGGLIRKVKPLNRLTEKE-MATYAYLKGIDYVIRECPMSADAKQIFY 233
Query: 256 REFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ + D+E+ P ++ E +S P G+C+ C C C L
Sbjct: 234 KKVLNDIEKESPGTKQFFYFGFLERLEKMFPPSSENAPPAGSCKVCQEPCYTDICSFCRL 293
>gi|337284842|ref|YP_004624316.1| ATPase [Pyrococcus yayanosii CH1]
gi|334900776|gb|AEH25044.1| ATPase [Pyrococcus yayanosii CH1]
Length = 302
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 18/298 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C R A +K +C E F E FE ++ + I +L + GE+I + SGGKDS
Sbjct: 3 CKLCG-RPAYIKLHYPRMYLCEEHFVEYFERKVQRTIEKYKLLRKGEKILVAVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL++L G D+ L I+ GI Y + S ++ G PL IV K+L G
Sbjct: 62 VTAYVLNKL------GYDMECLHINLGIGEYSEKSEAYARKQCAIIGAPLHIVRVKELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R +++ A D IATGHN DD A +L NIL +
Sbjct: 116 YGIGE---VKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ + GE + + KP E+E++ YA L+Y EC ++ A
Sbjct: 173 TEYLAKGGPLLPGEGKFVKKVKPLYELTEREVV-AYALAVGLEYIVEECPHARGATTLDM 231
Query: 256 REFIKDLERLRPRAILDIIKS----GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + ++E RP ++ +K F + ++ E C+ CG + + C C
Sbjct: 232 KAMLNEMEEKRPGTKMNFVKGYLRKRHLFELREKVELKE---CKVCGMPAQGEVCSFC 286
>gi|429216921|ref|YP_007174911.1| hypothetical protein Calag_0717 [Caldisphaera lagunensis DSM 15908]
gi|429133450|gb|AFZ70462.1| TIGR00269 family protein [Caldisphaera lagunensis DSM 15908]
Length = 328
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 19/321 (5%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+LCS C R A + + + + +C+ECF E + I + K+ + + + SGGKD
Sbjct: 2 KLCSKCGIRPAEIYQAHSNKMLCKECFLEDVRNRAIEEIKRWNMIKSDDIVMMALSGGKD 61
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGY-RDDSLQTVKRNEIQYGLPLKIVSYKD 132
VL VL + N L L+I EGI GY +++ + + + +YG+ + + S KD
Sbjct: 62 GYVLLDVLGNYFSKSN---KLIGLNIIEGIHGYNKEEDAKYLVKTAKEYGVDVIVTSIKD 118
Query: 133 LYGWTMDEIV-KVIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
G++MDEI K KN+ CT+CG RR+ ++ A + K+AT HN DD A+T +
Sbjct: 119 YIGYSMDEIYEKTRNSKNSFTPCTYCGASRRRIMNYYAREMGATKLATAHNLDDEAQTAV 178
Query: 189 LNILRGDIARL--SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY 246
+N+++GDI L + T +D + R KP + YE E ++ + K TEC Y
Sbjct: 179 INLMKGDINSLLKQHPNINITEDDMLVKRIKPLRKIYEWE-NASFTFIKNFHIQQTECPY 237
Query: 247 ---SPNAYRGFAREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGTCERCGYIS 301
+P RE K ER P ++ +++ + I + C +CG +
Sbjct: 238 IELAPTLRAKVRRELYK-YERENPGVLIRFMETLDILLEYIHQDKVATKLNRCIKCGEPT 296
Query: 302 SQ--KWCKACVLLEGLNRGLP 320
++ CK C LL + P
Sbjct: 297 TKGRNICKLCELLSSIGISNP 317
>gi|332796633|ref|YP_004458133.1| PP-loop family protein [Acidianus hospitalis W1]
gi|332694368|gb|AEE93835.1| PP-loop family protein [Acidianus hospitalis W1]
Length = 320
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 154/306 (50%), Gaps = 19/306 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +A +K P + +C+E F + FE + + + + + ++AI SGGKDST
Sbjct: 9 CSECKE-EAIIKIPYAHKYLCKEHFIQWFENRVERTVRKYNMLEGTRKLAIAVSGGKDST 67
Query: 76 VLAFVLSELNRRHNYGLDLFL--LSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L V++++ + + L ID G Y S++ +N G+ +IV K+
Sbjct: 68 TLLHVMTKIAEKEGIEIIGITIDLGIDMG-KKYSAKSVEFAIKNYEMLGVKYRIVKLKEE 126
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG+T+DE KV + C+ CG+ +R L++ A D +ATGHN +D+A+ VL
Sbjct: 127 YGFTIDE-AKVKIRRPVCSTCGLTKRYILEKVAKEESADTLATGHNLNDVAQYVLTGYYN 185
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR- 252
GDI L+R ++ E+G I + KP + EKEIM TYA K + + C P+ +R
Sbjct: 186 GDILSLARLRPVSPAENGYIKKIKPLFLSPEKEIM-TYALVKGIPFIYDSC---PHTFRV 241
Query: 253 -----GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ--GTCERCGYISSQ-- 303
R I+++E P ++ ++ + E +P++ G C+ CG +++
Sbjct: 242 GGETQDKIRRTIEEMEDKIPGFMISLVTNFEEKFRPLIEDIPKETLGKCKICGMPTNKGR 301
Query: 304 KWCKAC 309
+ C C
Sbjct: 302 EICSFC 307
>gi|319789617|ref|YP_004151250.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
gi|317114119|gb|ADU96609.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
Length = 309
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 22/313 (7%)
Query: 14 RLCSTCNQRKAALK--RPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
R+C + +RK A+ R L +C+E F E FE + + I ++F E++ + SGG
Sbjct: 4 RICKSKGERKKAVIFIRHHRL-ALCKEHFVEWFERQTEKTIKKFKMFSKREKVLVAVSGG 62
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISG--YRDDSLQTVKRNEIQYGLPLKIVS 129
KDS L F L H G + + + GI G Y + SL+ ++ + G PL +
Sbjct: 63 KDSLSLWFAL------HRLGYETYGFHVSLGIKGWDYSERSLEMCRKLSERIGRPLIVFD 116
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
K+ +G+T++EI K G ++ C+ CG F+R +++ A +ATGHN DD + +L
Sbjct: 117 LKEEFGYTIEEIAKGTGRRDVCSVCGTFKRYLMNKVAREHGFKVVATGHNLDDESALLLS 176
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
N +R +I L R + E G + KPF + EKE + +YA +++ + C PN
Sbjct: 177 NTIRWEIGYLGRQAPVLPEEGGFARKVKPFCFLTEKETV-SYAIVNNIEFLKSGC---PN 232
Query: 250 AYRGFAREFIKDL---ERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
A + F + L E P R + +K + + C+ CG ++
Sbjct: 233 AKEATSATFKRALALIEHEMPGTKLRFYKEFLKKARPLFEREVKRELQLNECQVCGMPTT 292
Query: 303 QKWCKACVLLEGL 315
C C LE L
Sbjct: 293 APVCAVCKALERL 305
>gi|14601833|ref|NP_148374.1| hypothetical protein APE_2086 [Aeropyrum pernix K1]
gi|5105785|dbj|BAA81097.1| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 331
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 7/296 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C A R + +CR+ + E E ++ + I+ ++L G+R+ SGGKDS+
Sbjct: 4 CSVCGAPAVAYIRYQR-RYLCRDHYLEFVESKVERAIMRHRLVGKGDRVLAAVSGGKDSS 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLS L+RR G + L I GI Y + S + R Q +PL + ++ G
Sbjct: 63 TLLAVLSRLSRR--IGFHVVALYIHLGIYEYSEKSREASIRLASQLDVPLIVFDLNEVLG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ K + C+ CG+ +R ++ A L VD +A GHNADDIA L + L D
Sbjct: 121 AGIPELAKA-SKRPPCSVCGMVKRYVINAAAVELGVDAVALGHNADDIAVYNLKSFLNQD 179
Query: 196 IARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ +S+ + T G + R +P Y YEKE F Y+ L + EC +
Sbjct: 180 LEAISKLGVKTESIPGVAVGRVRPLYYVYEKE-SFLYSLLAGLPFLHEECPFVERRQMEV 238
Query: 255 A-REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE RP L ++ G C CG +SS C C
Sbjct: 239 ELKETVNQLEDKRPGLKLQMVSKLAKRVEDYPKPKGSIGRCPSCGLLSSGGECSFC 294
>gi|355681750|gb|AER96823.1| ATP binding domain 3 [Mustela putorius furo]
Length = 130
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 7/131 (5%)
Query: 121 YGLPLKIVSYKDLY-GWTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+ LPL +V+Y DL+ GWTMD + + + + CTFCGV RR+AL+ GA L+ I
Sbjct: 1 WDLPLTVVAYADLFEGWTMDAVARSMAGTGRSRACCTFCGVLRRRALEEGARLVGATHIV 60
Query: 176 TGHNADDIAETVLLNILRGD-IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
TGHNADD+AETVL+N LRGD L + GE G +PRC+P + +KE++ YA+F
Sbjct: 61 TGHNADDMAETVLMNFLRGDAGRLARGGGLGSRGEGGALPRCRPLQLASQKEVVL-YAHF 119
Query: 235 KRLDYFSTECI 245
+RLDYFS EC+
Sbjct: 120 RRLDYFSEECV 130
>gi|393796279|ref|ZP_10379643.1| PP-loop domain-containing protein, partial [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 192
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +AA R + E++C CF + + I + + E +A+ SGGKDS
Sbjct: 3 CDRC-ENQAAYTRKYSGEKLCSNCFSNSILRKTAKTISKYNMIQNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L V++++ HN+ + ++IDEGI GYR+++L+ V+ + + K+ SYK+L+
Sbjct: 62 ALLNVINQMKSTHNFRIKA--ITIDEGIPGYRNEALEIVQEFCAKLNVEHKVFSYKELFD 119
Query: 136 WTMDEIVKVIGLK--NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+DE + + G + ++C+ CG RR+A+D A+ + D IATGHN DD +T ++N+L
Sbjct: 120 LTLDEALDLRGNEKTSSCSICGTLRRRAIDHAANYIGADVIATGHNLDDTLQTFVINMLS 179
Query: 194 GDIARL 199
GD ++
Sbjct: 180 GDTNKI 185
>gi|218295238|ref|ZP_03496074.1| PP-loop domain protein [Thermus aquaticus Y51MC23]
gi|218244441|gb|EED10966.1| PP-loop domain protein [Thermus aquaticus Y51MC23]
Length = 321
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C+E + E F +E + I +++ GER+ + SGGKDS L VL H G +
Sbjct: 21 LCKEHYLEWFVKETERAIRRHRMLHPGERVLVAVSGGKDSLALWDVL------HRLGYEA 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L ++ GI Y SL+ + + GLPL +V K+ YG+ + E+ ++ G + C+ C
Sbjct: 75 VGLHLELGIGAYSRRSLEVTQAFAKERGLPLLVVDLKEAYGFGVPELAELSG-RVACSAC 133
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIP 214
G+ +R +++ A +ATGHN DD A + N+L L R + + G
Sbjct: 134 GLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEDALVRQGPVLPEKPGLAA 193
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDII 274
R KPF E+E++ +Y + + Y EC + A +E + +E+ P A L +
Sbjct: 194 RVKPFYRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLLYKEALNRVEKEMPGAKLRFL 252
Query: 275 KSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQN 331
+ G +I K E+ CERCGY ++ C C + E + R + ++ Q
Sbjct: 253 E-GFLEKIQPRLKAEEEVALRECERCGYPTTGAICSFCRMWESVYRRAKRRHLLPEEAQF 311
Query: 332 NERTKDMK 339
R + ++
Sbjct: 312 QPRVEPVR 319
>gi|393797062|ref|ZP_10380426.1| PP-loop domain-containing protein, partial [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 192
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +AA R + E++C CF + + I + + E +A+ SGGKDS
Sbjct: 3 CDRC-ENQAAYTRKYSGEKLCSNCFSNSILRKTAKTISKYNMIQNNELVAVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L V++++ HN+ + ++IDEGI GYR+++L+ V+ + + K+ SYK+L+
Sbjct: 62 ALLNVINQMRSTHNFRIKA--ITIDEGIPGYRNEALEIVQEFCAKLNVEHKVFSYKELFD 119
Query: 136 WTMDEIVKVIGLK--NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+DE + + G + ++C+ CG RR+A+D A+ + D IATGHN DD +T ++N+L
Sbjct: 120 LTLDEALDLRGNEKTSSCSICGTLRRRAIDHAANDINADVIATGHNLDDTLQTFVINMLS 179
Query: 194 GDIARL 199
GD ++
Sbjct: 180 GDTNKI 185
>gi|212224868|ref|YP_002308104.1| ATPase [Thermococcus onnurineus NA1]
gi|212009825|gb|ACJ17207.1| ATPase [Thermococcus onnurineus NA1]
Length = 305
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ A +K +C E F E FE ++ + I +L K ER+ + SGGKDS
Sbjct: 5 CKFC-EKPAFIKLHYPRMYLCPEHFTEYFERKVKRTIERYKLLKPDERVLVVVSGGKDSA 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G D+ L I+ GI Y + S + KR G+PL IV K+L G
Sbjct: 64 VTAYVLKKL------GYDIECLHINLGIGEYSEKSEEYAKRQCEALGVPLHIVRVKELLG 117
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D +ATGHN DD A + N++ +
Sbjct: 118 HGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMHWN 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ +T GE + + KP E+E++ YA ++Y EC ++ A
Sbjct: 175 TQYLAKQGPLTPGEGKFVKKIKPLYELTEREVV-AYALANGIEYHIEECPHARGATTLEF 233
Query: 256 REFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + ++E RP ++ +K + + E C+ CG SS + C C
Sbjct: 234 KEVLNEMEEKRPGTKINFVKGYLRKKHIFEAELEEVELRECKVCGMPSSGEVCSFC 289
>gi|381190208|ref|ZP_09897731.1| ATP pyrophosphatase [Thermus sp. RL]
gi|384430671|ref|YP_005640031.1| hypothetical protein [Thermus thermophilus SG0.5JP17-16]
gi|333966139|gb|AEG32904.1| protein of unknown function UPF0021 [Thermus thermophilus
SG0.5JP17-16]
gi|380451801|gb|EIA39402.1| ATP pyrophosphatase [Thermus sp. RL]
Length = 320
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 13/306 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C Q+ R + L +CRE + + F +E + I +++ GER+ + SGGKDS
Sbjct: 2 VCKVCGQKAQVEMRSRGL-ALCREHYLDWFVKETERAIRRHRMLLPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VLS L G L I+ GI Y SL+ + + GL L +V K+ Y
Sbjct: 61 LALWDVLSRL------GYQAVGLHIELGIGEYSKRSLEVTEAFARERGLELLVVDLKEAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ ++ G + C+ CG+ +R +++ A +ATGHN DD A + N+L
Sbjct: 115 GFGVPELARLSG-RVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
LSR + + G R KPF E+E++ +Y + + Y EC + A
Sbjct: 174 QEETLSRQGPVLPEKPGLAARVKPFYRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVL 311
+E + +ER P A L ++ G +I + E+ CERCGY ++ C C +
Sbjct: 233 YKEALNLVERAMPGAKLRFLE-GFLEKIRPRLDVGEEVALRECERCGYPTTGAVCAFCRM 291
Query: 312 LEGLNR 317
+ + R
Sbjct: 292 WDAVYR 297
>gi|46198414|ref|YP_004081.1| veg136 protein [Thermus thermophilus HB27]
gi|46196036|gb|AAS80454.1| veg136 protein [Thermus thermophilus HB27]
Length = 321
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 13/328 (3%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C Q+ R + L +CRE + + F +E + I +++ GER+ + SGGKDS
Sbjct: 2 VCKVCGQKAQVEMRSRGL-ALCREHYLDWFVKETERAIRRHRMLLPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VLS L G L I+ GI Y SL+ + + GL L +V K+ Y
Sbjct: 61 LALWDVLSRL------GYQAVGLHIELGIGEYSKRSLEVTQAFARERGLELLVVDLKEAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ ++ G + C+ CG+ +R +++ A +ATGHN DD A + N+L
Sbjct: 115 GFGVPELARLSG-RVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
LSR + + G R KPF E+E++ +Y + + Y EC + A
Sbjct: 174 QEETLSRQGPVLPEKPGLAARVKPFYRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVL 311
+E + +ER P A L + G +I + E+ CERCGY ++ C C +
Sbjct: 233 YKEALNLVERSMPGAKLRFL-DGFLEKIRPRLDVGEEVALRECERCGYPTTGAVCAFCRM 291
Query: 312 LEGLNRGLPKMGIVRSRGQNNERTKDMK 339
+ + R K ++ R K ++
Sbjct: 292 WDAVYRRAKKRKLLPEEVSFRPRVKPLR 319
>gi|386361021|ref|YP_006059266.1| hypothetical protein TtJL18_1605 [Thermus thermophilus JL-18]
gi|383510048|gb|AFH39480.1| TIGR00269 family protein [Thermus thermophilus JL-18]
Length = 320
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 13/306 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C Q+ R + L +CRE + + F +E + I +++ GER+ + SGGKDS
Sbjct: 2 VCKVCGQKAQVEMRSRGL-ALCREHYLDWFVKETERAIRRHRMLLPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VLS L G L I+ GI Y SL+ + + GL L +V K+ Y
Sbjct: 61 LALWDVLSRL------GYQAVGLHIELGIGEYSKRSLEVTEAFARERGLELLVVDLKEAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ + G + C+ CG+ +R +++ A +ATGHN DD A + N+L
Sbjct: 115 GFGVPELALLSG-RVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
LSR + + G R KPF E+E++ +YA + + Y EC + A
Sbjct: 174 QEEALSRQGPVLPEKPGLAARVKPFYRFSEREVL-SYALLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVL 311
+E + +ER P A L ++ G +I + E+ CERCGY ++ C C +
Sbjct: 233 YKEALNLVERAMPGAKLRFLE-GFLEKIRPRLDVGEEVALRECERCGYPTTGAVCAFCRM 291
Query: 312 LEGLNR 317
+ + R
Sbjct: 292 WDAVYR 297
>gi|55980446|ref|YP_143743.1| ATP pyrophosphatase [Thermus thermophilus HB8]
gi|55771859|dbj|BAD70300.1| probable ATP pyrophosphatase, PP-loop superfamily [Thermus
thermophilus HB8]
Length = 320
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 13/306 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C Q+ R + L +CRE + + F +E + I +++ GER+ + SGGKDS
Sbjct: 2 VCKVCGQKAQVEMRSRGL-ALCREHYLDWFVKETERAIRRHRMLLPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VLS L G L I+ GI Y SL+ + + GL L +V K+ Y
Sbjct: 61 LALWDVLSRL------GYQAVGLHIELGIGEYSKRSLEVTQAFARERGLELLVVDLKEAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ ++ G + C+ CG+ +R +++ A +ATGHN DD A + N+L
Sbjct: 115 GFGVPELARLSG-RVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
LSR + + G R KPF E+E++ +Y + + Y EC + A
Sbjct: 174 QEETLSRQGPVLPEKPGLAARVKPFYRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKACVL 311
+E + +ER P A L ++ G +I + E+ CERCGY ++ C C +
Sbjct: 233 YKEALNLVERSMPGAKLRFLE-GFLEKIRPRLDVGEEVALRECERCGYPTTGAVCAFCRM 291
Query: 312 LEGLNR 317
+ + R
Sbjct: 292 WDAVYR 297
>gi|374633456|ref|ZP_09705821.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
gi|373523244|gb|EHP68164.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
Length = 317
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 23/315 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C KA ++ +C F+E FE+ + + + ++ + +A+ SGGKDST
Sbjct: 3 CTKCGN-KAIIRISYANLLLCSIHFWEWFEQRVERTVKKYRMLEGSRVVAVAVSGGKDST 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS-GYRDDSLQT--VKRNEIQYGLPLKIVSYKD 132
L VL +L+ H G ++ ++ID GI G R SL T +N G+ ++V ++
Sbjct: 62 TLLHVLHKLSSTH--GFEVIGINIDLGIDVGTRYSSLSTEFAIKNFEALGVKYRVVKLQE 119
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
YG+T+DE KV + C+ CG+ +R ++R + D +ATGHN +D+A+ V+
Sbjct: 120 EYGFTIDE-AKVKVRRPVCSTCGLVKRYVMERAGKEVGADTLATGHNLNDVAQFVMSGYH 178
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS----- 247
GD++ L+R ++ E+G + + KP +YE+EI TYA K + + C ++
Sbjct: 179 SGDVSNLARLRAVSPAENGYLKKIKPLFLSYEREIT-TYALTKGIPFIMDSCPHNLRVGG 237
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISS--Q 303
P + R +++ E P + ++++ E+ +P+ G C+ CG ++ +
Sbjct: 238 PTGDK--LRRILEETEDQIPGFMFRLVENFEDRVRPFFEDLPKFNLGKCKVCGMPTNMDR 295
Query: 304 KWCKACV----LLEG 314
+ C C LLEG
Sbjct: 296 EICSFCAVRSRLLEG 310
>gi|361127818|gb|EHK99775.1| putative Cytoplasmic tRNA 2-thiolation protein 1 [Glarea lozoyensis
74030]
Length = 225
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Query: 189 LNILRGDIARLSRCTLITTGE-DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+N+LRGD+ RL+R T I TG+ + R KP KY YEKEI+ YA+ K+LDYF+TEC+YS
Sbjct: 1 MNLLRGDLPRLARSTSIVTGDATSDVRRSKPLKYAYEKEIVL-YAHHKKLDYFTTECLYS 59
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
P A+RG AR IK+LER+RP AILD+++SGE+
Sbjct: 60 PEAFRGSARSLIKNLERVRPSAILDVVRSGEDM 92
>gi|410697776|gb|AFV76844.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermus oshimai JL-2]
Length = 321
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 10/303 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + R + L +CRE + E F +E + I +++ GER+ + SGGKDS
Sbjct: 3 CKFCEAKAQVELRGRGL-ALCREHYLEWFLKETERAIRRHRMLSPGERVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL H G L ++ GI Y + SL+ +R + GLPL +V K +G
Sbjct: 62 ALWDVL------HRLGYQAVGLHLELGIGAYSERSLEVTRRFAEERGLPLLVVDLKGAFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E+ ++ G + C+ CG+ +R +++ A +ATGHN DD A + N+L
Sbjct: 116 FGVPELAELSG-RVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L R + + G R KPF E+E++ +Y + + + EC + A
Sbjct: 175 EDALVRQGPVLPEKPGLAARIKPFYRFSEREVL-SYTLLRGIPFLHEECPNAQGAKSLLY 233
Query: 256 REFIKDLERLRPRAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEG 314
+E + +E+ P A L ++ + + + P CERCGY ++ C C + +
Sbjct: 234 KEALNLVEKNLPGAKLRFLEGFLDKIQPHLKGEDPPLRECERCGYPTTGAVCSFCRMWDA 293
Query: 315 LNR 317
+ R
Sbjct: 294 VYR 296
>gi|146304252|ref|YP_001191568.1| PP-loop domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145702502|gb|ABP95644.1| PP-loop domain protein [Metallosphaera sedula DSM 5348]
Length = 318
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA +K +C F E E + + I + + GER+A+ SGGKDST
Sbjct: 3 CKKCGS-KAIIKITSANLTLCSSHFTEWLEGRVERTIRDYGMIRGGERVAVAVSGGKDST 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS-GYRDDSLQT--VKRNEIQYGLPLKIVSYKD 132
L VL++L+ + G ++ ++ID GI G + SL T +N + G+ K+VS K+
Sbjct: 62 TLLHVLAKLSGK--MGFEVVGINIDLGIDRGTKYSSLSTEFAVKNFEKLGVEYKVVSLKE 119
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
+G+T+DE KV + C+ CG+ +R L+ A L D +ATGHN +D+A VL
Sbjct: 120 KHGFTIDE-AKVKIKRPVCSTCGLVKRYVLEEAAQELGADVLATGHNLNDMAVFVLSGYH 178
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
GD++ L+R ++ E+G I + KP EKE TYA + + C +P
Sbjct: 179 SGDLSNLARLRAVSPAENGYIRKIKPLFLVSEKETT-TYALINGIPFIMDSCPNNPRVGG 237
Query: 253 GFA---REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYI--SSQKW 305
+ R I++ E P +L ++++ E +P+ G C+ CG S ++
Sbjct: 238 PTSDKLRRIIENAEDEIPGFMLRLVENFETKIRPFFEDLPKFNLGKCKICGRPTNSDREI 297
Query: 306 CKACVL 311
C C +
Sbjct: 298 CSFCAV 303
>gi|325294837|ref|YP_004281351.1| PP-loop domain-containing protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065285|gb|ADY73292.1| PP-loop domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 312
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 14/309 (4%)
Query: 14 RLCSTCNQR-KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
R+C + +R KA++ +C+E F E FE++ + I +F E++ I SGGK
Sbjct: 4 RICKSKGKRTKASIYIRHHRLALCKEHFIEWFEKQTAKTIKEFNMFSKDEKVLIAVSGGK 63
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISG--YRDDSLQTVKRNEIQYGLPLKIVSY 130
DS L + L H G + I GI G Y SL K+ + PL I
Sbjct: 64 DSLSLWYAL------HRLGYKTYGFHISLGIEGWEYSKKSLDICKKFSERIERPLIIFDI 117
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
KD +G++++EI K G K+ C+ CG F+R +++ +ATGHN DD + +L N
Sbjct: 118 KDEFGYSIEEIAKGSGRKDVCSVCGTFKRYLMNKICKEQGFKVVATGHNLDDESALLLSN 177
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
+R +I L R + ++G + KPF + EKEI+ +YA +++Y T C + A
Sbjct: 178 TIRWEIGYLGRQHPVLPEKNGFARKVKPFVFFTEKEIV-SYAILNKIEYLETGCPNAKEA 236
Query: 251 YRGFAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
+ + LE P R + +K + E C+ C ++ C
Sbjct: 237 TSILYKRSLAMLEHEMPGTKLRFYKEFLKKARPIFEKELKEHLELNECKICKMPTTASIC 296
Query: 307 KACVLLEGL 315
C LE L
Sbjct: 297 SVCRTLERL 305
>gi|305662983|ref|YP_003859271.1| PP-loop domain-containing protein [Ignisphaera aggregans DSM 17230]
gi|304377552|gb|ADM27391.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
Length = 321
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 138/300 (46%), Gaps = 15/300 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C+ R+A P ++CRE F E ++ + + + +GERI I SGGKDS
Sbjct: 3 CSLCD-REAFTYIPYARLRLCREHFGEFIRSKVVRAMDRYGMVSSGERILIAVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +++ +++ + L + L ID GI Y S + V +G+ L + K G
Sbjct: 62 ALLHIMNSISQERS--LRVLALHIDLGIGEYSRRSREIVSMIAKSFGIDLIVYDLKRDLG 119
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++ E+ K I + C+ CG+ +R ++ A L +AT HNADDIA +L NI+ GD
Sbjct: 120 LSLPEMKKGIR-RGTCSLCGLVKRYVMNTAAIELGA-TLATAHNADDIAIYILKNIVIGD 177
Query: 196 IARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG- 253
+ + G + + +P YE E M Y + + Y EC P YRG
Sbjct: 178 WNSCIKLVPVIPEVKGYVAKKIRPLYEVYENEAML-YVVSQNIPYVDMEC---PYTYRGG 233
Query: 254 ---FAREFIKDLERLRPRAILDII-KSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
REF+ LE RP + + K N + + G C CG ISS+ C C
Sbjct: 234 IEERVREFLNKLEEERPGIKISFLRKFTRNIEVLRINREEHIGQCTSCGLISSRDMCSFC 293
>gi|14590222|ref|NP_142287.1| hypothetical protein PH0300 [Pyrococcus horikoshii OT3]
gi|3256690|dbj|BAA29373.1| 310aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R+A +K +C E F E FE ++ + I +L ERI + SGGKDS
Sbjct: 3 CKFCS-REAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G ++ L I+ GISGY + S + K+ G PL IV K++ G
Sbjct: 62 VTAYVLKKL------GYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R +++ A D IATGHN DD A +L NIL +
Sbjct: 116 YGIGE---VKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ I + I + KP E+E++ YA L+Y EC Y+ A
Sbjct: 173 TEYLAKGGPILPQQGKFIKKVKPLYEVTEREVV-AYALAVGLEYIVEECPYARGATTLDM 231
Query: 256 REFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + +LE RP + ++ + K E C+ C SS C C
Sbjct: 232 KGVLNELEEKRPGTKFNFVRGYLKKKKLFEPEIKEKEIKECKICRMPSSGDICAFC 287
>gi|312137387|ref|YP_004004724.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311225106|gb|ADP77962.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 297
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 13/295 (4%)
Query: 16 CSTCNQR-KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C CN+ + ++ P+ +C F E E + VI ++L + E++ + SGGKDS
Sbjct: 3 CKFCNKEAEVTIRYPRM--HLCENHFKEYCENRVKNVIDKHRLIEKDEKLLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
VLA++L++L G + L ID GI Y + ++ K+ + GLPL IV K L
Sbjct: 61 LVLAYILNKL------GYEFEGLHIDLGIEDYSEMCKKSSKKIFSEIGLPLHIVKIKKLL 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + E V + C++CG+ +R +++ A +ATGHN DD + V NIL
Sbjct: 115 GRGIGE---VKTRRPVCSYCGLTKRYIMNKFAYDNGFTAVATGHNLDDESAFVFSNILHW 171
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+I LS+ + ED + + KP +KEI YA F ++++ + +C Y+ A
Sbjct: 172 NIDYLSKQGPLLEAEDKFVKKIKPLYELRDKEISL-YASFAKIEHVTKKCKYARGATSIK 230
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
++F+ LE+ P L+ I+ R K E CE C S K C C
Sbjct: 231 YKKFLDILEKDNPGIKLNFIRGFLRNRKIFKKKDFELRECEICRMPSQGKRCAFC 285
>gi|124516144|gb|EAY57652.1| probable ATPase, PP-loop superfamily protein [Leptospirillum
rubarum]
Length = 307
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 11/253 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P+ C CF +++ + I ++F +RI + SGGKDS
Sbjct: 3 CRVCRE-KAVIDLPRHNASFCPACFDSYLMDQVWKAIDEFEMFGKNDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHN-YGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L+ L R + LDL GI GY +SL+ + ++YGL L + S
Sbjct: 62 ALWDILNRLGYRTTGFHLDL-------GIGGYSGESLEKTRAFALRYGLTLHVESLVQEV 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G ++ I ++ + C+ CGV +R +R A L+ +ATGHN DD A +L NIL
Sbjct: 115 GASVANIAELTN-RPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDEASRLLGNILHW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L + E G + + KP EKE M YA+ K ++Y EC S NA + F
Sbjct: 174 QDGYLEKQNPALPDEGGLVRKVKPLNRLTEKE-MAAYAFLKGINYVVHECPMSVNAKQLF 232
Query: 255 AREFIKDLERLRP 267
++ + +E+ P
Sbjct: 233 YKKIMNQVEQESP 245
>gi|294495611|ref|YP_003542104.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
gi|292666610|gb|ADE36459.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
Length = 255
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 124/234 (52%), Gaps = 5/234 (2%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C F E+ E+++ I L E IA+ SGGKDS+VL ++L+++ G+ L
Sbjct: 24 LCEIHFCEMVEKKVRAHIEDQNLILNNEHIAVALSGGKDSSVLLYILAKILPEFE-GVKL 82
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+++DEGI YR+++L + + +IVS+++ +G + +++K + + CT C
Sbjct: 83 TAITVDEGIPNYREETLTYAQELATFLNIEHRIVSFRENFGAPLPDLLKKRNV-SACTLC 141
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIP 214
GV RR+ L++ + V K+ATGH+ DD AET ++NIL +I + +G++
Sbjct: 142 GVLRRKILEQETFSMDVPKLATGHSLDDEAETAMMNILTANIDAIINTASPNSGKES--L 199
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
R KP E EI Y K + + EC Y+ + R R+ DLE P+
Sbjct: 200 RIKPLSVLNEHEIAL-YGILKGIFHEFPECPYAGPSLRAEVRQIFLDLETKYPK 252
>gi|410478001|ref|YP_006765638.1| PP-loop superfamily ATPase [Leptospirillum ferriphilum ML-04]
gi|406773253|gb|AFS52678.1| putative ATPase, PP-loop superfamily [Leptospirillum ferriphilum
ML-04]
Length = 307
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P+ C CF +++ + I ++F +RI + SGGKDS
Sbjct: 3 CRVCRE-KAVIDLPRHNASFCPACFDSYLMDQVWKAIDEFEMFGKNDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L+ L G +D GI GY +SL+ + ++YGL L + S G
Sbjct: 62 ALWDILNRL------GYQTTGFHLDLGIGGYSGESLEKTRAFALRYGLTLHVESLVQEVG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++ I ++ + C+ CGV +R +R A L+ +ATGHN DD A +L NIL
Sbjct: 116 ASVANIAELTN-RPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDEASRLLGNILHWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L + E G + + KP EKE M YA+ K ++Y EC S NA + F
Sbjct: 175 DGYLEKQNPALPDEGGLVRKVKPLNRLTEKE-MAAYAFLKGINYVVHECPMSVNAKQLFY 233
Query: 256 REFIKDLERLRP 267
++ + +E+ P
Sbjct: 234 KKIMNQVEQESP 245
>gi|297526412|ref|YP_003668436.1| PP-loop domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255328|gb|ADI31537.1| PP-loop domain protein [Staphylothermus hellenicus DSM 12710]
Length = 323
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ R L +C E F E E + + I L + G+R+ +G SGGKDS
Sbjct: 4 CRICGRKAVVYLRHSRL-WLCSEHFNEFIENRVMRTIKRYNLIRKGDRVLLGLSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA +LS+L R + G L+L I+ GI Y + + + K+ + PL I+ + + G
Sbjct: 63 VLAHILSKL--RESIGFKLYLAHINLGIGEYSEKNAEVAKKISEKTNAPLIILDLRKILG 120
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + + C+ CGV +R L+ A LK + IATGHN DD+A +L L +
Sbjct: 121 VGIPELA-LKTRRPPCSVCGVVKRYLLNALAVELKANSIATGHNLDDMATFILKEFLVQN 179
Query: 196 IARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC-IYSPNAYRG 253
+ ++ + G +D + + KP TYE++I YA + Y +C +
Sbjct: 180 LEQIPKLAPRIEGVKDYLVAKIKPLYETYEEDIK-KYAELNNILYVEEKCPLADETTLTW 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT----CERCGYISSQKWCKAC 309
++ ++DLE P + I+ + K P+ G C CG SS K C C
Sbjct: 239 HLKKHLRDLEYRFPGLTIGFIRR----LVKNIEKYPKPGDTIRRCSICGMPSSGKICSFC 294
Query: 310 VLLE 313
+ E
Sbjct: 295 KITE 298
>gi|315425194|dbj|BAJ46864.1| hypothetical conserved protein [Candidatus Caldiarchaeum
subterraneum]
Length = 233
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN--- 150
L +++DEGI GYRD++L+ V+ +PL S+++ +G ++ EIV +++
Sbjct: 13 LVAVTVDEGIEGYRDEALEYVEEVTRMLEVPLYKTSFEEAFGKSLSEIVASKQFRSSGLA 72
Query: 151 -CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGE 209
C+ CG RR+A++ A IAT H DD+ +T L RG++ + I
Sbjct: 73 ACSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQTYFLKTFRGELG----TSEIGLRL 128
Query: 210 DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPR 268
+GP IPR PF+ T E+E++F YAY + + S C + + R R F+ + + P
Sbjct: 129 EGPFIPRVAPFRLTPEREVVF-YAYLHNIPFQSQVCPNAATSMRNMIRRFLAEFDERYPG 187
Query: 269 AILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
++ ++S F +T+ Q C CG SS++ C+ C L + L
Sbjct: 188 SLFAALRS---FEKTTTLGKKMQRVCSYCGEPSSRELCRVCELTQTL 231
>gi|126465307|ref|YP_001040416.1| PP-loop domain-containing protein [Staphylothermus marinus F1]
gi|126014130|gb|ABN69508.1| PP-loop domain protein [Staphylothermus marinus F1]
Length = 310
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+CRE F + E + + I L + G+R+ +G SGGKDS VLA++LS+L R G L
Sbjct: 8 LCREHFNKFIENRVMRTIKRYNLIRRGDRVLLGLSGGKDSVVLAYILSKL--RETIGFKL 65
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+L ++ GI Y +++ V++ + PL I+ +++ + E+ + + C+ C
Sbjct: 66 YLTHLNLGIGEYSKKTVEIVRKISEKINAPLIILDLREILSIGIPELA-LKTRRPPCSVC 124
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTL-ITTGEDGPI 213
GV +R L+ A LK D IATGHN DD+ +L L ++ ++ + I ED
Sbjct: 125 GVVKRYLLNALAVELKADSIATGHNLDDMVTFILREFLVQNLEQIPKLAPRIEGAEDYLA 184
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS--------------------PNAYRG 253
+ KP TYE++I YA +DY +C + P G
Sbjct: 185 TKIKPLYETYEEDIK-KYAELNNIDYVEEKCPLADEKTITSSLKKHLGILENKFPGLTIG 243
Query: 254 FAREFIKDLERL-RPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
F R F+K+LE+ +PR D I+ C CG SS + C C
Sbjct: 244 FIRRFVKNLEKYPKPR---DTIRR-----------------CSICGMPSSGEVCSFC 280
>gi|390961133|ref|YP_006424967.1| hypothetical protein CL1_0970 [Thermococcus sp. CL1]
gi|390519441|gb|AFL95173.1| hypothetical protein CL1_0970 [Thermococcus sp. CL1]
Length = 307
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 15/298 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A +K +C E F E FE ++ + I ++ + ER+ + SGGKDS
Sbjct: 5 CKFC-ERSAFIKLHYPKMYLCEEHFTEYFERKVKRTIERYKMLRPDERVLVVVSGGKDSA 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A VL +L G D+ L I+ GI Y + S + KR G+PL +V K+L G
Sbjct: 64 VTAHVLKKL------GYDIECLHINLGIGEYSEKSEEYAKRQCEALGVPLHVVRVKELLG 117
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D +ATGHN DD A + N++ +
Sbjct: 118 KGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMHWN 174
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ +T GE +G + + KP E+E++ YA ++Y EC ++ A
Sbjct: 175 TQYLAKQGPVTPGEFNGKLVKKVKPLYELTEREVV-AYALANGIEYHIEECPHAVGATTI 233
Query: 254 FAREFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + ++E RP ++ +K + + E C CG SS + C C
Sbjct: 234 EYKEILNEMEEKRPGTKMNFVKGYLRKKHLFEAELERAELRECRVCGMPSSGEVCSFC 291
>gi|14521864|ref|NP_127340.1| hypothetical protein PAB1092 [Pyrococcus abyssi GE5]
gi|5459084|emb|CAB50570.1| Predicted ATPase of the PP-loop superfamilyl [Pyrococcus abyssi
GE5]
gi|380742500|tpe|CCE71134.1| TPA: N-type ATP pyrophosphatase superfamily [Pyrococcus abyssi GE5]
Length = 303
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R+A +K +C E F E FE ++ + I +L K E+I + SGGKDS
Sbjct: 3 CKFCS-REAYIKLHYPKMYLCEEHFKEYFERKVQRTIEKYKLLKKDEKILVAVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL++L G ++ L I+ GI Y S + K+ G PL IV K++ G
Sbjct: 62 VTAYVLNKL------GYNIECLHINLGIGEYSKKSEEYAKKQCELIGAPLHIVRIKEILG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R +++ A D IATGHN DD A +L N+L +
Sbjct: 116 YGIGE---VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLYWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+++ + E + + KP E+E++ YA L+Y EC Y+ A
Sbjct: 173 TEYIAKGGPLLPAEGKFVKKVKPLYELTEREVV-AYALAVGLEYIVEECPYARGATTLDM 231
Query: 256 REFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + +LE RP + ++ + + + E C+ CG SS C C
Sbjct: 232 KAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPSSGDICAFC 287
>gi|341582427|ref|YP_004762919.1| ATPase [Thermococcus sp. 4557]
gi|340810085|gb|AEK73242.1| ATPase [Thermococcus sp. 4557]
Length = 302
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 15/298 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A +K +C E F E FE ++ + I +L K GERI + SGGKDS
Sbjct: 3 CKFC-ERPAFIKLHYPRMYLCPEHFTEYFERKVKRTIERYKLIKPGERILVVVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G D+ L I+ GI Y + S + KR G+PL IV K+L G
Sbjct: 62 VTAYVLKKL------GYDIECLHINLGIGEYSEKSEEYAKRQCEALGVPLHIVRVKELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D +ATGHN DD A + N++ +
Sbjct: 116 KGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFANLMNWN 172
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ IT + +G + + KP E+E++ YA ++Y EC ++ A
Sbjct: 173 TQYLAKQGPITPAQFNGKLVKKIKPLYEVTEREVV-AYALANGIEYHIEECPHAVGATTI 231
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG--TCERCGYISSQKWCKAC 309
+ + ++E RP ++ +K + ++ E C CG +S + C C
Sbjct: 232 EVKGILNEMEERRPGTKINFVKGYLRKKALFEKELQEADLRECRVCGMPASGEVCSFC 289
>gi|256811396|ref|YP_003128765.1| PP-loop domain-containing protein [Methanocaldococcus fervens AG86]
gi|256794596|gb|ACV25265.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
Length = 296
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 21/299 (7%)
Query: 16 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C++ LK P +C+E F E FE + + I ++ E+I + SGGKD
Sbjct: 4 CKFCDKENYIKLKSPNMY--LCKEYFVEYFENRVKKSIEKYKMLNKDEKILVAVSGGKDG 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
A+VL +L G ++ L I+ GI + + SL+TVK+ + +PL +V+ KD+
Sbjct: 62 HAAAWVLKKL------GYNIELFHINLGIKDFSEISLETVKKLAEKLEVPLHVVNLKDIT 115
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G TM++ V G K C+ CG +R +++ D I TGHN DD +L NIL
Sbjct: 116 GKTMED---VRGKK--CSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNILNW 170
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+I L++ + D + + K F + E+E++ YA + + + + +C ++ A
Sbjct: 171 NIRYLAKHEPVLPAHDKFLKKVKIF-FEIEEELILKYAEAEGIPFTTAKCRFAEKAITLK 229
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R + +LE+ RP + + +K+ F++ + CE CG S+ + C C
Sbjct: 230 HRAYFNELEKERPNIKYQFLSGYMKNRHLFKVEDENFQFRE--CEVCGMTSAGRICSFC 286
>gi|452077061|gb|AGF93031.1| PP-loop domain-containing protein, partial [uncultured organism]
Length = 201
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 19/208 (9%)
Query: 33 EQICRECFYEVFEEEI-----HQVIVGNQLFKAGERIAIGASGGKDSTV-LAFVLSELNR 86
E +C++ F FE + QV +GN G+++A+ SGGKDS V L V L+
Sbjct: 6 EHLCKDHFKNFFETRVFREFRKQVDIGN-----GKKVAVAVSGGKDSIVALRMVHKILDE 60
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKV-I 145
R + +++ ++IDEGI GYR SL+ + + G+ IVS++D + +DEI++ I
Sbjct: 61 RRDS--EIYGITIDEGIEGYRPKSLRIAEEEYEKLGIDYDIVSFEDRFDLPLDEILEQDI 118
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
G+ C+ CGV RR ++R A D +ATG N DD ++++L+N R DI +L+R
Sbjct: 119 GMP--CSVCGVLRRWIMNRMAKEADADFLATGLNLDDTSQSILMNFCRADIEKLARLGPH 176
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
++G +PR P + T EKE +Y Y
Sbjct: 177 KKVKEGLVPRIAPLRNTPEKE---SYLY 201
>gi|317122881|ref|YP_004102884.1| phosphoadenosine phosphosulfate reductase [Thermaerobacter
marianensis DSM 12885]
gi|315592861|gb|ADU52157.1| phosphoadenosine phosphosulfate reductase [Thermaerobacter
marianensis DSM 12885]
Length = 304
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + +A + + C E F+E FE ++ + I +++F +RI + SGGKDS
Sbjct: 3 CTKCGE-QAVVPIRRHNAAFCTEHFFEYFENQVQRAIKEHRMFTHDDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ VL L G + L ID GI Y S + V+R + G L++VS ++ YG
Sbjct: 62 AIWDVLLRL------GYEAHGLYIDLGIGEYSKRSTEKVRRFAEERGAVLRVVSVEEEYG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
E+ + G + C+ CG+ +R +R A D I TGHN DD A T+L N+L +
Sbjct: 116 LGTTELARKAG-RPACSACGLNKRYLFNREALAGGYDVIVTGHNLDDEAATLLGNVLHWN 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R ++ + + KP E+EI +YA + +DY EC + A
Sbjct: 175 TGYLARQAPVLEASAPNLVKKVKPLYRLTEREIA-SYAVLRGIDYIVEECPMAKGAKSIQ 233
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+ + LE L P R + ++ G + E C CG ++ + C C
Sbjct: 234 YKHILNQLEELSPGAKARFLFGFLEHGRP-HFEQERQQVEVRPCRICGQPTTAEICAHCR 292
Query: 311 LLE 313
+++
Sbjct: 293 MMQ 295
>gi|384440155|ref|YP_005654879.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291288|gb|AEV16805.1| hypothetical protein TCCBUS3UF1_17660 [Thermus sp. CCB_US3_UF1]
Length = 321
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 17/308 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C ++ R + L +C+ + + F +E + I +++ GER+ + SGGKDS
Sbjct: 2 VCKVCGEKAQVELRGRGL-ALCKAHYLDWFVKETERAIRRHRMLTPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VL H G L I GI Y + SL+ + + GL L +V ++ Y
Sbjct: 61 LALWDVL------HRLGYQAVGLHIQLGIGAYSERSLEVTQAFARERGLELLVVDLREAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ ++ G + C+ CG+ +R L++ A +ATGHN DD A + N+L
Sbjct: 115 GFGVPELAELSG-RVACSACGLSKRYILNQVAVEEGFRAVATGHNLDDEAAVLFGNLLNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R + G R KPF E+E++ +Y + + Y EC + A
Sbjct: 174 QEDALARQGPVLPERPGLAARVKPFYRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQ---GTCERCGYISSQKWCKAC 309
+E + +E P A L + E F RI + P + C+RCGY ++ C C
Sbjct: 233 YKEALNRVEAEMPGAKLRFL---EGFLERIQPHLQAPGEVPLSQCQRCGYPTTGAVCAFC 289
Query: 310 VLLEGLNR 317
+ + + R
Sbjct: 290 RMWDAVYR 297
>gi|330834635|ref|YP_004409363.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329566774|gb|AEB94879.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 321
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 154/307 (50%), Gaps = 17/307 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C KA ++ P +C + F E E + +VI ++ + +A+ SGGKDST
Sbjct: 7 CKKCGS-KAVIRLPYANLTLCAKHFSEWLETRVEKVIKEYKMISEKDVVAVAVSGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI-SGYRDDSLQT---VKRNEIQYGLPLKIVSYK 131
L +L L+ R+ G DL ++ID GI +G + +L T VK E+ + + K++ K
Sbjct: 66 TLLHILKGLSERN--GFDLVGINIDLGIDNGTKYSALSTELAVKNFELTH-VRYKVIELK 122
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
YG+ +DE K+ + C+ CG+ +R L+ A + + +ATGHN +D+A V+
Sbjct: 123 REYGFGIDE-AKLKARRPVCSTCGLVKRYVLEEAAESVGANVLATGHNLNDMAVFVMSGY 181
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
GD+ L+R ++ E+G I + KP T EKE TYA ++ + C +P+
Sbjct: 182 HTGDLQNLARLRAVSPAENGYIKKVKPLFLTSEKETA-TYAIVNKIPFIMDSCPNNPSVG 240
Query: 252 RGFA---REFIKDLERLRPRAILDIIKSGENFRISTSTKMPE--QGTCERCGYISS--QK 304
+ R I++ E P ++ ++++ EN +P+ G C+ CG ++ ++
Sbjct: 241 GPTSDKLRRLIENTEDEIPGFMVRLVENFENKIRPFFEDLPKFNLGKCKMCGKPTNNDRE 300
Query: 305 WCKACVL 311
C C L
Sbjct: 301 ICSFCAL 307
>gi|345018739|ref|YP_004821092.1| PP-loop domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344034082|gb|AEM79808.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 300
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 18/302 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C ECF + ++ + + N++FK +R+ + SGGKDS
Sbjct: 3 CIRC-KKKAVITLKRHNAAFCAECFLHYYRNQVLKNVQKNKMFKKDDRVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL++ G ++ + I+ GI Y + S + V+ + LPL + + K+ +G
Sbjct: 62 ALWDVLAK------EGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A IATGHN DD T+L NIL
Sbjct: 116 LDIYKLSKTLK-RSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEVATLLGNILNWG 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R ++ I + KPF EKE M+ Y ++++ EC YS A
Sbjct: 175 ESYLARQGPVLPQTHPKLIKKVKPFYTLTEKENMY-YVLLNKIEFLHEECPYSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE P R ++ ++ G ++F+ + ++ E C+ CG++++ + C C
Sbjct: 234 YKELLNELEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKE---CKTCGHVTTMEECSFC 290
Query: 310 VL 311
L
Sbjct: 291 RL 292
>gi|424869652|ref|ZP_18293336.1| putative ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'C75']
gi|206602942|gb|EDZ39422.1| probable ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'5-way CG']
gi|387220420|gb|EIJ75114.1| putative ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'C75']
Length = 307
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P+ C CF +++ + I ++F +RI + SGGKDS
Sbjct: 3 CRVCRE-KAVIDLPRHNASFCAACFDSYLMDQVWKAIDEFEMFTKSDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L+ L G +D GI GY +S++ + +++GL L + S G
Sbjct: 62 ALWDILNRL------GYQTTGFHLDLGIGGYSGESVEKTRAFALRHGLSLHVESLVQEVG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
++ I + + C+ CGV +R +R A L+ +ATGHN DD A +L NIL
Sbjct: 116 ASVANIADLTN-RPPCSACGVSKRHLFNRAAKKLECQVVATGHNLDDEASRLLGNILHWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L + E G + + KP EKE M YA+ K ++Y EC S NA + F
Sbjct: 175 DGYLEKQNPALPDEGGLVRKVKPLNRLTEKE-MAAYAFLKGINYVVHECPMSVNAKQLFY 233
Query: 256 REFIKDLERLRP 267
++ + +E+ P
Sbjct: 234 KKIMNQVEQESP 245
>gi|284161871|ref|YP_003400494.1| PP-loop domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284011868|gb|ADB57821.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 290
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 15/296 (5%)
Query: 22 RKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL 81
RKA +C ECF + + + + I + K+ E+I + SGGKDST +A+ L
Sbjct: 7 RKAVFHSRVYRITLCDECFPKFYVNLVKRSIKRYGILKSSEKILVCVSGGKDSTAMAYAL 66
Query: 82 SELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEI 141
+EL+ Y ++LF ID GI Y +SL+ V+ L L +V +D YG+T+D++
Sbjct: 67 NELD----YNIELF--HIDLGIGNYSKESLKAVEELAQTLNLNLNVVKLED-YGFTIDDV 119
Query: 142 VKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR 201
K C+ CG+ +R ++R A D IAT H +DI + N+L G++ +S+
Sbjct: 120 ES----KKVCSACGIVKRYIMNRFARERGFDVIATAHTCEDIILFFIKNVLSGNVEYISK 175
Query: 202 CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKD 261
+ G D + + KP EKE T L + EC ++PN +E I +
Sbjct: 176 LSPRIDGFDKLVAKAKPLFERTEKENA-TLVLTLNLPFTPMECPHAPN---DIWKEIIYE 231
Query: 262 LERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNR 317
+E R + ++ S + E C+ CG +S+ + C C ++E +R
Sbjct: 232 IEAKRRGFKQNFVRGIVKLAKSVKAEEWEVKHCKICGEVSNFEICSFCKIVERYSR 287
>gi|261403374|ref|YP_003247598.1| PP-loop domain-containing protein [Methanocaldococcus vulcanius M7]
gi|261370367|gb|ACX73116.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
Length = 304
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 20/299 (6%)
Query: 16 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C CN ++ PK + +C+E F E FE+ + + I ++ E+I + SGGKD
Sbjct: 3 CRFCNSPSYVEIRYPKKI-NLCKEHFIEYFEDRVKKSIEKYKMLNKDEKILVAVSGGKDG 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V A++L +L G ++ L I+ GI G+ D+SL+ VK + PL +V K++
Sbjct: 62 HVAAWILKKL------GYNIELFHINLGIKGFSDESLRAVKALAERLNTPLHVVDLKEIT 115
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G T+++I C+ CG+ +R +++ D I TGHN DD +L N+L
Sbjct: 116 GKTIEDI-----RGKKCSICGITKRYLMNKFGYERGFDVIITGHNLDDEISFILNNVLNW 170
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+I L++ + D + + K F + ++ ++ YA + + + + +C ++ A
Sbjct: 171 NIRYLAKHEPVLPAHDKFLKKVKIF-FEIDEYLILKYAEAEEIPFTTVKCKFAEGAITLK 229
Query: 255 AREFIKDLERLRPRAILDII----KSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R+++ +LE+ R L + K+ F++ + CE CG S+ K C C
Sbjct: 230 HRDYLNELEKERSGIKLQFLYGYMKNRHLFKVEEEDFQFRE--CEVCGMTSAGKICSFC 286
>gi|332158560|ref|YP_004423839.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
gi|331034023|gb|AEC51835.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
Length = 302
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R+A +K +C E F E FE ++ + I +L K E++ + SGGKDS
Sbjct: 3 CKFCS-REAYIKLHHPKMYLCEEHFKEYFENKVQRTIEKYRLLKKNEKVLVAVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G ++ L I+ GI Y + S ++ G L IV +++ G
Sbjct: 62 VTAYVLKKL------GYNIECLHINLGIGEYSEKSEMYARKQCELIGAKLHIVRIREILG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R +++ A D IATGHN DD A +L N+L +
Sbjct: 116 YGIGE---VRTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLHWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ ++R I + + + KP E+E++ YA L+Y EC Y+ A
Sbjct: 173 MEYIARGGPILPRQGKFVKKVKPLYEVTEREVV-AYALAIGLEYIVEECPYARGATTLDM 231
Query: 256 REFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE RP + ++ + + E C+ CG SS C C
Sbjct: 232 KEILNELEEKRPGTKYNFVRGYVKKKHLFEPEIREGELKECKICGMPSSGDICAFC 287
>gi|70606217|ref|YP_255087.1| PP-loop family protein [Sulfolobus acidocaldarius DSM 639]
gi|449066418|ref|YP_007433500.1| PP-loop family protein [Sulfolobus acidocaldarius N8]
gi|449068694|ref|YP_007435775.1| PP-loop family protein [Sulfolobus acidocaldarius Ron12/I]
gi|68566865|gb|AAY79794.1| pP-loop family protein [Sulfolobus acidocaldarius DSM 639]
gi|449034926|gb|AGE70352.1| PP-loop family protein [Sulfolobus acidocaldarius N8]
gi|449037202|gb|AGE72627.1| PP-loop family protein [Sulfolobus acidocaldarius Ron12/I]
Length = 315
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 12/241 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ +A +K P +C F E E +V+ ++F +RI + SGGKDST
Sbjct: 3 CGKCDD-EAVIKIPYANISLCARHFTEWLENRFERVVEKYKMFDGSDRIGVAVSGGKDST 61
Query: 76 VLAFVLSELNRRHNY---GLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
L ++++L ++ + G+ + L ID G GY D SL+ +N G+ K+++ K+
Sbjct: 62 TLLHLMNKLAQKRGFEIVGIHIH-LGIDMG-KGYSDKSLEFALKNFQMLGVKYKLINVKE 119
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
YG+T+DE K + C+ CG+ +R +++ A +D + TGHN +D+A+ VL
Sbjct: 120 KYGFTIDE-AKFKIRRPICSTCGLVKRYSMEEIAEEEGLDTVVTGHNLNDMAQFVLSGYF 178
Query: 193 RGDIARLSRCTLITTGEDG-PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
GD+ LSR + G + + KP YEKEI+ TYA + + C P+ +
Sbjct: 179 SGDVNNLSRLKPVLPPTRGYKVKKVKPLFLIYEKEIL-TYAILNNIPFIYDSC---PHTF 234
Query: 252 R 252
R
Sbjct: 235 R 235
>gi|389851871|ref|YP_006354105.1| ATPase of the PP-loop superfamilyl [Pyrococcus sp. ST04]
gi|388249177|gb|AFK22030.1| putative ATPase of the PP-loop superfamilyl [Pyrococcus sp. ST04]
Length = 302
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 140/297 (47%), Gaps = 15/297 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ ++A +K +C + F E FE ++ + I + K E++ + SGGKDS
Sbjct: 3 CKFCS-KEAYIKLHYPKMYLCIDHFKEYFERKVQRTIERYNMLKRNEKVLVAISGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G D+ L I+ GI Y S + K+ PL IV K+L G
Sbjct: 62 VTAYVLKKL------GYDIECLHINLGIGEYSKKSEEYAKKQCELIDAPLHIVRIKELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R +++ A D IATGHN DD A +L N+L +
Sbjct: 116 YGIGE---VKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLHWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ I GE + + KP E+E++ YA L+Y EC ++ A
Sbjct: 173 TEYLAKGGPILPGEGKFVKKVKPLYELTEREVV-AYALAVGLEYIVDECPHARGATTLDM 231
Query: 256 REFIKDLERLRPRAILDIIKS---GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + +LE RP + ++ +N K E C+ CG SS + C C
Sbjct: 232 KAVLNELEEKRPGTKFNFVRGYLRKKNL-FEVEIKRQELRECKICGMPSSGEICAFC 287
>gi|242398445|ref|YP_002993869.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242264838|gb|ACS89520.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 302
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 16 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C R L PK +C F E FE+++ + I +L KA E++ + SGGKDS
Sbjct: 3 CRFCENRAYIKLHYPKMY--LCSNHFIEYFEKKVKKTIDKYKLLKASEKVLVVISGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V A+VL +L G D+ L I+ GI GY + S + K+ G+PL +V ++L
Sbjct: 61 AVTAYVLKKL------GYDVECLHINLGIGGYSEKSEEYAKKQCELMGVPLYVVRVRELL 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + E V + C++CG+ +R ++ A IATGHN DD A + N++
Sbjct: 115 GAGIGE---VRTRRPACSYCGLTKRYIFNKFAYDNGFGVIATGHNLDDEASFIFSNLMNW 171
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L++ + GE + + KP E+E++ YA L+Y EC ++ A
Sbjct: 172 NTEYLAKQGPVLPGEGTFVKKIKPLYGLTEREVV-AYALAVGLEYIINECPHARGATTIE 230
Query: 255 AREFIKDLERLRPRAILDIIKSG--ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +E RP ++ +K + + E C+ CG S + C C
Sbjct: 231 YKEILNKMEEKRPGTKINFVKGYLRKKHLFEAELEEIELKKCKICGMPSQDEKCSFC 287
>gi|397650771|ref|YP_006491352.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
gi|393188362|gb|AFN03060.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
Length = 303
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R A +K +C E F E FE ++ + I +L ERI + SGGKDS
Sbjct: 5 CKFCD-RPAFIKLHYPKMYLCEEHFKEYFERKVARTIEKYKLASKDERILVAVSGGKDSA 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G + L ++ GI Y + S K+ G PL I+ K+L G
Sbjct: 64 VTAYVLKKL------GYKIECLHLNLGIGEYSEKSEIYAKKQCEFIGAPLNIIRVKELLG 117
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E+ + C++CG+ +R +++ A D +ATGHN DD A ++ N+L +
Sbjct: 118 YGIGEVRTS---RPTCSYCGLTKRYIMNKFAYDNGFDAVATGHNLDDEASFLMNNLLHWN 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ + GE + + KP E+E++ YA L+Y EC Y+ A
Sbjct: 175 TEYLAKGGPLLPGEGKFVKKIKPLYELTEREVV-AYAIAVGLEYIVEECPYARGATTLDM 233
Query: 256 REFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE RP + ++ + K + C+ CG +S + C C
Sbjct: 234 KEVLNELEEKRPGTKFNFVRGFLRKKKLFEPEVKGKDLKECKICGMPASGEICSFC 289
>gi|167039805|ref|YP_001662790.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915540|ref|ZP_07132850.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307724869|ref|YP_003904620.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854045|gb|ABY92454.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300888404|gb|EFK83556.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307581930|gb|ADN55329.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
Length = 300
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 18/302 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C ECF + ++ + I N++FK +R+ + SGGKDS
Sbjct: 3 CIRC-KKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL + G ++ + I+ GI Y + S + V+ + LPL + + K+ +G
Sbjct: 62 ALWDVLVK------EGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A IATGHN DD A T+L NIL
Sbjct: 116 LDIYKLSKTLK-RSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWG 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R ++ I + KP EKE M+ Y ++++ EC YS A
Sbjct: 175 ESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMY-YVLLNKIEFLHEECPYSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE P R ++ ++ G ++F+ + ++ E C+ CG++++ + C C
Sbjct: 234 YKELLNELEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKE---CKTCGHVTTTEECSFC 290
Query: 310 VL 311
L
Sbjct: 291 RL 292
>gi|217077353|ref|YP_002335071.1| ATPase, PP-loop superfamily [Thermosipho africanus TCF52B]
gi|217037208|gb|ACJ75730.1| ATPase, PP-loop superfamily [Thermosipho africanus TCF52B]
Length = 289
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 21/296 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +++A LK P+ +C + F E FE +I + + ++ +++ + SGGKDS
Sbjct: 3 CQHC-KKQAILKSPR----LCEDHFVEYFERKIGKFLEKYKI--KNKKLLVAISGGKDSV 55
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+++VLS+L + N ++ F + + GI + + S + R PL I K G
Sbjct: 56 VVSYVLSKLKEKFNLQIEYFFIRL--GIPTFTEKSEEIATRVTESINYPLTIYDLKKEEG 113
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T+ ++ C++CG+ RR L++ A D + GHN DD + N+ +
Sbjct: 114 FTIMDVKY-----KPCSYCGMIRRYILNKYAFENDFDYVVLGHNLDDEVFFIFNNMFNKN 168
Query: 196 IARLSRCTLI--TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
I +L R + T E + R KP + E+EI+ YA K L + C PN+
Sbjct: 169 ITQLQRTGPLTQTIKEKKLVGRIKPLYFLTEEEILL-YAKLKNLPHIGCAC---PNSLES 224
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
++F KD++ R + L+I+ S + + E CE+CGY ++ CK C
Sbjct: 225 TQKKFKKDIKFSRDQK-LNIVYSILEMKKYLPEEKVELKFCEKCGYPTTSDTCKFC 279
>gi|11498919|ref|NP_070150.1| hypothetical protein AF1321 [Archaeoglobus fulgidus DSM 4304]
gi|2649255|gb|AAB89924.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 287
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 22/304 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ A + + +C +C+ E + + + I ++ + ER+ I SGGKDS+
Sbjct: 3 CKKCGRKAVANLKAYGI-ALCEKCYPEFYRNLVKRSIKRFRILRPEERVLIAISGGKDSS 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA VL EL+ D LL ID GI Y ++S + V+ L L +V +D YG
Sbjct: 62 ALAAVLKELD------YDAELLYIDLGIGNYSEESERVVRELSSSLDLSLNVVRLRD-YG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T+D++ + + K C+ CG +R ++R A D +ATGH A+DIA + N+ G
Sbjct: 115 FTVDDVARKMRRK-TCSACGTAKRYIMNRFARENSFDVVATGHTAEDIASFYIKNVAGG- 172
Query: 196 IARLSRCTLITTGE---DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
R+ L+ E + + R KP EKE M Y + + EC ++PN
Sbjct: 173 -TRVWAEKLMPRNEPFDEKIVTRAKPLFEVSEKENML-YVLVNDIPHTLMECPHAPNPE- 229
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
+E + D+ER +P + + ++ + + + E C+ CG +SS C C L
Sbjct: 230 --WKEIVYDIERRKPGFVKNFVRG----LVRPAEEFEETKYCKICGEVSSGDVCAFCRLR 283
Query: 313 EGLN 316
E L+
Sbjct: 284 ERLS 287
>gi|326390081|ref|ZP_08211643.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993946|gb|EGD52376.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 300
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 18/302 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C ECF + ++ + I N++FK +R+ + SGGKDS
Sbjct: 3 CIRC-KKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL++ G ++ + I+ GI Y + S + V+ + LPL + + K+ +G
Sbjct: 62 ALWDVLAK------EGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A IATGHN DD T+L NIL
Sbjct: 116 LDIYKLSKTLK-RSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEVATLLGNILNWG 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R ++ I + KP EKE M+ Y ++++ EC YS A
Sbjct: 175 ESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMY-YVLLNKIEFLHEECPYSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE P R ++ ++ G ++F+ + ++ E C+ CG++++ + C C
Sbjct: 234 YKELLNELEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKE---CKTCGHVTTTEECSFC 290
Query: 310 VL 311
L
Sbjct: 291 RL 292
>gi|392939798|ref|ZP_10305442.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
gi|392291548|gb|EIV99991.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
Length = 300
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 18/302 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C ECF + ++ + I N++FK +R+ + SGGKDS
Sbjct: 3 CIRC-KKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL++ G ++ + I+ GI Y + S + V+ + LPL + + K+ +G
Sbjct: 62 ALWDVLAK------EGYNVVAMYINLGIGEYSNRSQKVVENFAKKNNLPLIVKNIKEEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A IATGHN DD A T+L NIL
Sbjct: 116 LDIYKLSKTLK-RSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWG 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R ++ + KP EKE M+ Y ++++ EC YS A
Sbjct: 175 ESYLARQGPVLPQTHPETYKKVKPLYTLTEKENMY-YVLLNKIEFLHEECPYSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE P R ++ +++G ++F+ + ++ E C+ CG++++ + C C
Sbjct: 234 YKELLNELEEKSPGTKQRFLIGFLENGKKHFKEVENIELKE---CKTCGHVTTTEECSFC 290
Query: 310 VL 311
L
Sbjct: 291 RL 292
>gi|223477951|ref|YP_002582104.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus sp. AM4]
gi|214033177|gb|EEB74005.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus sp. AM4]
Length = 306
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 15/298 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ A +K +C E F E FE ++ + I ++ K ER+ + SGGKDS
Sbjct: 5 CKFC-EKPAFIKLHYPKMYLCEEHFREYFERKVKRTIERYKMLKPDERVLVVVSGGKDSA 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A++L +L G ++ L I+ GI Y + S K+ G+PL IV K+L G
Sbjct: 64 VTAYILKKL------GYNIECLHINLGIGEYSEKSESYAKKQCEALGVPLHIVRVKELLG 117
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D +ATGHN DD A + N++ +
Sbjct: 118 KGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNMMHWN 174
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ +T + +G + + KP E+E++ YA +DY EC ++ A
Sbjct: 175 TQYLAKQGPVTPSQFNGKLVKKVKPLYEVTEREVV-AYALANGIDYMMEECPHAVGATTI 233
Query: 254 FAREFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + ++E RP ++ +K + + E C CG SS + C C
Sbjct: 234 EYKEILNEMEEKRPGTKINFVKGFLRKKHLFEAELQEAELRECRVCGMPSSGEVCSFC 291
>gi|320451026|ref|YP_004203122.1| Veg136 protein [Thermus scotoductus SA-01]
gi|320151195|gb|ADW22573.1| Veg136 protein [Thermus scotoductus SA-01]
Length = 321
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 17/308 (5%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C ++ R + +C+ + E F +E + I +++ + GER+ + SGGKDS
Sbjct: 2 VCKVCGEKAQVELRGRGF-SLCKAHYLEWFVKETERAIRRHRMLQPGERVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VL L G + L + GI Y + SL+ + GL L +V + Y
Sbjct: 61 LALWDVLWRL------GYEAVGLHLQLGIGAYSERSLEVTQSFAQDRGLELWVVDLRQAY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ + E+ ++ G + C+ CG+ +R +++ A +ATGHN DD A + N++
Sbjct: 115 GFGVPELAELSG-RVACSACGLSKRYIINQVAVEGGFRVVATGHNLDDEAAVLFGNLMNP 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R + + G R KPF E+E++ +Y + + Y EC + A
Sbjct: 174 QEDALVRQGPVLPEKPGLAARVKPFFRFSEREVL-SYTLLRGIRYLHEECPNAKGAKSLL 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENF--RISTSTKMPEQGT---CERCGYISSQKWCKAC 309
+E + +ER P A L + E F RI + E+ CERCGY ++ C C
Sbjct: 233 YKEALNLVEREMPGAKLRFL---EGFLDRIQPRLQAAEEVQLRECERCGYPTTGAVCSFC 289
Query: 310 VLLEGLNR 317
+ +G+ R
Sbjct: 290 RMWDGVYR 297
>gi|296108939|ref|YP_003615888.1| PP-loop domain protein [methanocaldococcus infernus ME]
gi|295433753|gb|ADG12924.1| PP-loop domain protein [Methanocaldococcus infernus ME]
Length = 290
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 20/285 (7%)
Query: 29 PKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRH 88
PK ++ +C+E F E FE + + I ++ E+I + SGGKDS A++L +L
Sbjct: 17 PK-VKYLCKEHFIEYFENRVKRSIEKFKMLSKDEKILVPISGGKDSHAAAYILKKL---- 71
Query: 89 NYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLK 148
G D+ L I+ GIS + + SL+ VK L IV+ K++ G T+++ V G K
Sbjct: 72 --GYDIELFHINLGISNFSEISLEKVKELSNFINAKLHIVNLKEITGKTIED---VKGKK 126
Query: 149 NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTG 208
C+ CG+ +R +++ D I TGHN DD +L N+L +I L++ +
Sbjct: 127 --CSICGITKRYLMNKFGYEHGFDTIVTGHNMDDELSFMLNNLLGWNIRYLAKHLPVLPA 184
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP- 267
D + + K F Y E++ + YA + Y + +C Y+ A RE++ LE +P
Sbjct: 185 HDKFLKKVKIF-YEIEEKYIKAYADALNIPYTTVKCKYAKKAITIRHREYLNKLEEEKPG 243
Query: 268 ---RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ +K+ E F + K E CE CG S+ K C C
Sbjct: 244 IKYHFLYGYLKNRELFEVEKDFKFRE---CEICGMTSASKICSFC 285
>gi|357418842|ref|YP_004933710.1| PP-loop domain protein [Thermovirga lienii DSM 17291]
gi|355398185|gb|AER67613.1| PP-loop domain protein [Thermovirga lienii DSM 17291]
Length = 318
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 138/317 (43%), Gaps = 17/317 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAG--ERIAIGASGGKD 73
CS C + KA + P C +CF F + +++ + + F G I + SGGKD
Sbjct: 17 CSRC-RAKAIISLPSHHANFCEDCFLVFFHKAVNRAM---KKFPIGLDTPIMVAVSGGKD 72
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L VL++L G + ID GI + + S + GL L I KDL
Sbjct: 73 SLALWDVLADL------GFTTKGIHIDLGIPNFSEASRSACEEFAKSRGLELSIYELKDL 126
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G+++ EI K+ K C+ CG +RQ L+R A IATGHN DD A +L N LR
Sbjct: 127 FGFSLPEIAKLKSSKV-CSVCGTLKRQFLNRLALQEGFSVIATGHNLDDEASRLLGNTLR 185
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
A L + G + R KP + E E + Y + + YF +C ++ A
Sbjct: 186 HRDAYLQKAYPFLPAGPGLVARMKPL-FRLESEEIRIYCRVRGIKYFGDKCPFARGATSH 244
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLE 313
E ++ +E P D + + + + G C CG +S Q C C L +
Sbjct: 245 ILLEALQFIESQMPGTKRDFLFGFLDRQTPPQFEDALLGNCSVCGALSYQDTCSVCRLKD 304
Query: 314 GLNRGLPKMGIVRSRGQ 330
L R K ++ RG
Sbjct: 305 ELKR---KKEFLKDRGH 318
>gi|18976645|ref|NP_578002.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|18892216|gb|AAL80397.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 283
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 12/277 (4%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+C E F E FE ++ + I +L ERI + SGGKDS V A+VL +L G +
Sbjct: 3 LCEEHFKEYFERKVARTIEKYKLASKDERILVAVSGGKDSAVTAYVLKKL------GYKI 56
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L ++ GI Y + S K+ G PL I+ K+L G+ + E+ + C++C
Sbjct: 57 ECLHLNLGIGEYSEKSEIYAKKQCEFIGAPLNIIRVKELLGYGIGEVRTS---RPTCSYC 113
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIP 214
G+ +R +++ A D +ATGHN DD A ++ N+L + L++ + GE +
Sbjct: 114 GLTKRYIMNKFAYDNGFDAVATGHNLDDEASFLMNNLLHWNTEYLAKGGPLLPGEGKFVK 173
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDII 274
+ KP E+E++ YA L+Y EC Y+ A +E + +LE RP + +
Sbjct: 174 KIKPLYELTEREVV-AYAIAVGLEYIVEECPYARGATTLDMKEVLNELEEKRPGTKFNFV 232
Query: 275 KSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + K + C+ CG +S + C C
Sbjct: 233 RGFLRKKKLFEPEVKGKDLKECKICGMPASGEICSFC 269
>gi|20808825|ref|NP_623996.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478816|ref|ZP_05092183.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|20517476|gb|AAM25600.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
gi|214035271|gb|EEB75978.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 300
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 18/302 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C ECF + ++ + I N++FK +++ + SGGKDS
Sbjct: 3 CIRC-KKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDKVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL + G ++ + I+ GI Y + S + V+ + LPL + + K+ +G
Sbjct: 62 ALWDVLVK------EGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A IATGHN DD A T+L NIL
Sbjct: 116 LDIYKLSKTLK-RSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWG 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L+R ++ I + KP EKE M+ Y ++++ EC YS A
Sbjct: 175 ESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMY-YVLLNKIEFLHEECPYSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +LE P R ++ ++ G ++F+ + ++ E C+ CG++++ + C C
Sbjct: 234 YKELLNELEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKE---CKTCGHVTTTEECSFC 290
Query: 310 VL 311
L
Sbjct: 291 RL 292
>gi|217968052|ref|YP_002353558.1| PP-loop domain-containing protein [Dictyoglomus turgidum DSM 6724]
gi|217337151|gb|ACK42944.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
Length = 318
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 17/300 (5%)
Query: 16 CSTC-NQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C+ C N+ ++R T C+E F E ++ + I ++F+ ++I + SGGKDS
Sbjct: 3 CTKCHNEASIYIRRHNT--AFCKEHFIEYIYGQVEKAIKKYKMFEKNDQILVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L L + + L ID GIS Y + S +TVK+ L L I+S KDLY
Sbjct: 61 LALWDILISLGYKADG------LHIDLGISEYSEKSKETVKKFAESKNLKLHIISIKDLY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + EI K C CGV +R ++ A LK + IATGHN DD + T+L NIL
Sbjct: 115 GLGIKEIAHK-NRKTPCATCGVIKRYIMNLAALELKYNVIATGHNLDDESATLLGNILHW 173
Query: 195 DIARL-SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
I L + ++ E G + KP E E Y K+++Y EC S +A
Sbjct: 174 QIDYLKAHSPILLEDEVGFARKVKPLYRVSEYETS-AYCIMKKIEYIIDECPMSIDAQSL 232
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +ER P + ++ G+ + S + + C+ CG ++ + C C
Sbjct: 233 KYKEILNIIERDSPGTKEQFYFGFLEKGKIY-FSPEKRDIKLNNCKICGQPTTSEICGFC 291
>gi|167038552|ref|YP_001666130.1| PP-loop domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116948|ref|YP_004187107.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166857386|gb|ABY95794.1| PP-loop domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930039|gb|ADV80724.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 298
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 14/298 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CTVC-RKPAIVKFPAHNSAFCEEHLDAFFMRQVAKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V FVL L G ++ ID GI + + S + V+ + +PL+IV+ K+
Sbjct: 62 VTTFVLKRL------GYEVLGFFIDLGIEENNFSSQSREVVESFCKENDIPLEIVNLKEK 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G + ++ K C CGV +R ++ +K D +ATGH DD+A+ +L N+ R
Sbjct: 116 FGKGIPDVAK--RQDRICAICGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ LS+ T + E G + KP + E+EI+ +A + + C YS A
Sbjct: 174 WDLHHLSKGTPVLPEESGFARKIKPLAFQAEEEII-AFAKLHNIKPVTAVCPYSREAKYT 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + ++ P + TCE CG+ S C C
Sbjct: 233 RYQEALDMLEEKSPGIKRSFYKNYTKYAHLFAGTSARPPKITCELCGFPSVSPVCTFC 290
>gi|256752672|ref|ZP_05493523.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748434|gb|EEU61487.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 298
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 14/298 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CAVC-RKPAIVKFPAHNSAFCEEHLDAFFMRQVAKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V FVL L G ++ ID GI + + S + V+ + +PL+IV+ K+
Sbjct: 62 VTTFVLKRL------GYEVLGFFIDLGIEENNFSSQSREVVESFCKENDIPLEIVNLKEK 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G + ++ K C CGV +R ++ +K D +ATGH DD+A+ +L N+ R
Sbjct: 116 FGKGIPDVAK--RQDRICAICGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ LS+ T + E G + KP + E+EI+ +A + + C YS A
Sbjct: 174 WDLHHLSKGTPVLPEESGFARKIKPLAFQAEEEII-AFAKLHNIKPVTAVCPYSREAKYT 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + ++ P + TCE CG+ S C C
Sbjct: 233 RYQEALDMLEEKSPGIKRSFYKNYTKYAHLFAGTSARPPKITCELCGFPSVSPVCTFC 290
>gi|225850787|ref|YP_002731021.1| PP-loop domain protein [Persephonella marina EX-H1]
gi|225644978|gb|ACO03164.1| PP-loop domain protein [Persephonella marina EX-H1]
Length = 315
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 140/318 (44%), Gaps = 27/318 (8%)
Query: 13 GRLCSTCNQR----KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGA 68
G C+ C + KA + P +CR+ + + FE+ + + I ++F +RI +
Sbjct: 7 GSRCTICKAKGGKEKAVVFLPHHRLALCRDHYIQWFEKRVEKTIKEFRMFSKKDRILVAV 66
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDS L VL++L Y D F ID GI Y +DS R + G PL I+
Sbjct: 67 SGGKDSLTLWNVLTKLG----YEADGFY--IDLGIDQYSEDSKNLSLRFSERIGRPLHII 120
Query: 129 SYKDLYGWTMDEI--VKVIGLKNN---CTFCGVFRRQALDRGASLLKVDKIATGHNADDI 183
S KD EI + VI N C+ CG +R ++R A L + IATGHN DD
Sbjct: 121 SLKD-------EIAPIPVIDKSTNKPACSACGTAKRYYMNRYAKQLGYNIIATGHNLDDE 173
Query: 184 AETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE 243
+ N L DI L + + E G I + KP EKE YA+F ++Y E
Sbjct: 174 VAVLFGNTLHWDIKYLKKQYPVLREEGGFIRKVKPLCKITEKESAM-YAFFNDIEYIEYE 232
Query: 244 CIYSPNAYRGFAREFIKDLERLRPRAIL----DIIKSGENFRISTSTKMPEQGTCERCGY 299
C +S A +E + +E P L + +K+ K + C+ CG
Sbjct: 233 CPFSEGASSIEYKEILSKIEEKHPGTKLQFYTNFLKNMYPIIKEHYEKESQINICKICGE 292
Query: 300 ISSQKWCKACVLLEGLNR 317
S C C L + + +
Sbjct: 293 PSFSDICGMCRLKKAVEK 310
>gi|61657492|emb|CAI44404.1| hypothetical protein [Thermotoga sp. KOL6]
Length = 304
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A +K ++C+E F E E+ + + I ++FK +I I SGGKDS
Sbjct: 3 CTKC-KKTAVVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFRMFKKDSKILIAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G D+ L I G S + + V++N L +V +
Sbjct: 62 SLWHILKKL------GYDVDALFIRAGKSAMVQKAQEIVEKNAEILNTKLHVVDATQYFD 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + +I + C+ CGV RR +++ A D + TGHN +D A +L NIL
Sbjct: 116 GLSTQEISIILRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQ 175
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R L+ + +P+ KP + YE++I YA + + C +S A
Sbjct: 176 EGYLERQWPLLPKTHEKLVPKAKPLVFNYEEDIKL-YAKLNEIPHLEMACPFSVGATSLI 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ CE CGY ++ K C C L
Sbjct: 235 YKKLLRELEEEQPGVTLNFYLGFLKRKKEPKHEVEGLRECEECGYPTTAKVCSFCRL 291
>gi|315231707|ref|YP_004072143.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
gi|315184735|gb|ADT84920.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
Length = 307
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA +K +CRE F E FE ++ + I +L K ERI + SGGKDS
Sbjct: 3 CKFC-EKKAFIKLHYPKMYLCREHFIEYFERKVKRTIEKYKLLKRDERILVVVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+++VL +L G ++ L I+ GI Y S + K+ L IV ++L G
Sbjct: 62 VVSYVLKKL------GYNIECLYINLGIGEYSAKSEEYAKKQCEMINAKLHIVRVRELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + C++CG+ +R ++ A D I TGHN DD A + NI+ +
Sbjct: 116 AGIGELKTS---RPTCSYCGITKRYIFNKFAYDNGFDVIVTGHNLDDEASFIFGNIMNWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ + GE + + KP E+E++ YA +DY EC ++ A
Sbjct: 173 TQYLAKQGPLLPGEGKFVKKVKPLYEVTEREVV-AYALAVGIDYMVEECPHARGATTLSY 231
Query: 256 REFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + D+E RP ++ +K R + E C+ CG + + C C
Sbjct: 232 KEILNDMEEKRPGTKINFVKGYLRKRHLFEQEIEEVEFKECKVCGMPALGEKCSFC 287
>gi|303246570|ref|ZP_07332848.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
gi|302491910|gb|EFL51788.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
Length = 302
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 128/299 (42%), Gaps = 15/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+K P C ECF F++++ I + + GE++ + SGGKDS
Sbjct: 3 CKRCGE-TAAVKLPSHHAGFCPECFERFFKKQVETAIRRHGMILPGEKVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLS+L G D+ L + GI D + + + G L ++ D+ G
Sbjct: 62 ALLRVLSDL------GHDVAGLHVHLGIPDSSDPVCERTEAYCRENGFALHVLRMADV-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + + C+ CG +R +R A +ATGHN DD + N+LR D
Sbjct: 115 LAIPEVKDAV-RRPICSVCGKIKRHYFNRFAYENGYAALATGHNLDDEVARLFANVLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A L + E + + KP E E Y +FK +D++ C YS A
Sbjct: 174 AAYLGGQGPMLPAEGRFVRKIKPLYRLTEFETA-AYCFFKGIDHWKAACPYSGGASFTGH 232
Query: 256 REFIKDLERLRP---RAILD--IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ DLE P A + + K +F P CERCGY SS + C C
Sbjct: 233 KRLFADLEDRSPGQKTAFYEAFLAKGKSHFAGVGEENGPVLTPCERCGYPSSSEVCGVC 291
>gi|375082510|ref|ZP_09729567.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
gi|374742849|gb|EHR79230.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
Length = 311
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 139/296 (46%), Gaps = 13/296 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA +K +C + F E FE ++ + I +L K E++ + SGGKDS
Sbjct: 3 CRVCGE-KAFIKLHYPKMYLCADHFVEYFERKVKRTIEKYKLLKPDEKVLVVISGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A+VL +L G ++ L I+ GI Y + S Q + G PL +V+ ++L G
Sbjct: 62 VTAYVLKKL------GYNVECLHINLGIGEYSEKSEQYAREQCRIIGAPLHVVNVRELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D IATGHN DD A + N++ +
Sbjct: 116 KGIGE---VRTRRPTCSYCGLTKRYLFNKFAYDNGFDVIATGHNLDDEASFIFSNLMNWN 172
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L++ + GE + + KP E+E++ YA L+Y EC ++ A
Sbjct: 173 TEYLAKQGPVLPGEGKFVRKVKPLYELTEREVV-AYALAVGLEYIVDECPHARGATTIEY 231
Query: 256 REFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + ++E RP ++ +K R + E C+ CG + + C C
Sbjct: 232 KEILNEMEEKRPGTKINFVKGYLRKRHLFEAELREIELKECKLCGMPAQGEKCSFC 287
>gi|157363281|ref|YP_001470048.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
gi|157313885|gb|ABV32984.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
Length = 301
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 16/309 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ + A ++ + C E F E FE+ + + I +F E++ + SGGKDS+
Sbjct: 3 CRKCS-KTAVIRLRQHNTAFCEEHFNEYFEKRVERTINEYSMFNKSEKLLVAVSGGKDSS 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V +VL +L G L ID G +++ + VK+ + G L IV+ K +G
Sbjct: 62 VAWYVLKKL------GYTTSGLFIDLGT----ENNTEIVKKISEKTGEELLIVNGKQYFG 111
Query: 136 -WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
T+ EI +++ + C+ CG+ RR +++ A D + TGHN DD +L N+L
Sbjct: 112 GLTVAEISRIVK-RPTCSICGLIRRYIMNKVAYEKNFDAVITGHNLDDEVSFLLGNVLNW 170
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ + R + I + KP + EKEI + YA RL + + C +S NA
Sbjct: 171 QVEYIKRQAPVLESNGRLIKKAKPLVWLTEKEI-YVYALINRLTFSTERCPFSKNASSLK 229
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRI--STSTKMPEQGTCERCGYISSQKWCKACVLL 312
++ + +LE +P L K + + S + + C CGY ++ K C C L
Sbjct: 230 YKKVLNELEITQPGVKLRFYKEFQKKDLFGSDNEEKARLSECAICGYPTTGKVCSFCRLE 289
Query: 313 EGLNRGLPK 321
E + + K
Sbjct: 290 EMVKDAMGK 298
>gi|269986991|gb|EEZ93267.1| PP-loop domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 209
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 7/202 (3%)
Query: 120 QYGLPLKIVSYKDLYGWTMDEIVKV-IGLKNNCTFCGVFRRQALDRGASLLKVDKIATGH 178
+YG+ KI SYKD G TMD I K G+ C+ CGV RR ++ AS + DK+AT H
Sbjct: 7 RYGVDYKIYSYKDFTGRTMDSITKTREGIP--CSACGVLRRHLINYAASEVSADKVATAH 64
Query: 179 NADDIAETVLLNILRGDIARLSRCTLIT--TGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
N DD AE V++N+++ DI ++ R + E G +PR KPF + EKE M ++
Sbjct: 65 NMDDEAENVIMNLVQNDIEKMVRLGAYSGVIKEKGFVPRIKPFLFLSEKETML-FSMLND 123
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-GTCE 295
++ T C Y+ RG IK +E A ++I + + + +K + C
Sbjct: 124 INAIHTPCPYAGMGLRGLISREIKRMETEFIGAKRNVINTMLDIKNQHVSKNGLKINKCR 183
Query: 296 RCGYISSQKWCKACVLLEGLNR 317
CG+ S+ C+AC L E L +
Sbjct: 184 YCGFPSASDICEACKLKEELKK 205
>gi|339265413|ref|XP_003366167.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
gi|316963376|gb|EFV49033.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
Length = 131
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 71/103 (68%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C++ +A+++RP +CR+CF FE ++H+ I Q F GE + IG SGGKDS
Sbjct: 27 CANCDEEQASMRRPACGTLLCRKCFSAAFEADVHRTITTEQFFTDGENVVIGVSGGKDSA 86
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNE 118
V+ VL LN+R NYGL L +L+++EGI+GYRD+SL +V + +
Sbjct: 87 VVLHVLYLLNKRFNYGLHLSMLAVNEGIAGYRDESLCSVDKQQ 129
>gi|389861716|ref|YP_006363956.1| ATPase of the PP-loop superfamily [Thermogladius cellulolyticus
1633]
gi|388526620|gb|AFK51818.1| putative ATPase of the PP-loop superfamily [Thermogladius
cellulolyticus 1633]
Length = 331
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 18/300 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R+A ++ P +CRE F E ++ + + ++F G R+ +G SGGKDS
Sbjct: 4 CHYC-EREAVVRLPYAKLNLCREHFAEYLLRKLERSVNRYKMFGKGSRVVVGVSGGKDSV 62
Query: 76 VLAFVLSELNRRHNYGL-DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +LSE GL + ++ ++ I Y S++TV+R +++GL IV + Y
Sbjct: 63 TLTKLLSE------SGLAKMLVVHVNLAIGEYSRISVETVRRFSVEHGLDYLIVDLSE-Y 115
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + E+V ++ C+ CG+ +R L+ L D +AT H+ DD+A ++ + L
Sbjct: 116 GIGIPELVAKTK-RSPCSVCGMVKRYVLNALTMDLGYDALATAHHGDDMAVYIVKSFLLQ 174
Query: 195 DIARLSRCTLITTGEDGPIPR-CKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY-R 252
D +L + + + G R KP YE E+ T+A L + S +C + +
Sbjct: 175 DYDQLYKISPVNYEVPGLAARKVKPLYEFYEFEVE-TFAKLYGLPFVSVKCPFKHVGWLE 233
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG---TCERCGYISSQKWCKAC 309
+ RE + E P + +++S + R + S + EQ C CG ISS C C
Sbjct: 234 SYVRELLDRAEEESPGFKVSLLRS--HARRTMSMRSAEQAQPKACASCGLISSGTECSFC 291
>gi|397485173|ref|XP_003813733.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-binding
domain-containing protein 3-like protein-like [Pan
paniscus]
Length = 230
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ A+L+RP + + +C CF FE E+ ++ L G +A+G SGGKDST
Sbjct: 6 CASCHVACASLRRPCSGQALCGSCFCTAFEAEVQHTVLVGYLLPPGAVVALGTSGGKDST 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VLA VL L G+ L L + D+GI Q++ L + + S G
Sbjct: 66 VLAHVLRTLAP--GLGILLQLTAADKGIGHGLAGGSQSL--------LKVHVGSTCGSLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
W+ G S L V I GHNADD+AETVL+N LRG
Sbjct: 116 WS-------------------------KAGFSSLWVSDIILGHNADDMAETVLMNFLRGG 150
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDY 239
+G G +PRC+P + +KE++ Y +F+RLDY
Sbjct: 151 WPGRGP---GLSGLGGALPRCRPLQLASQKEVV-PYGHFRRLDY 190
>gi|327398487|ref|YP_004339356.1| PP-loop domain-containing protein [Hippea maritima DSM 10411]
gi|327181116|gb|AEA33297.1| PP-loop domain protein [Hippea maritima DSM 10411]
Length = 294
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 11/279 (3%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
CR+CF F ++++ + ++F ++I I SGGKDS L L EL G +
Sbjct: 21 FCRDCFLLFFYNQLNKAVKQFKMFDKEDKILIAVSGGKDSMSLWSALLEL------GYNT 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
L +D GI G+ + + V+ ++ PL++V K G + E+VK I + C C
Sbjct: 75 TALFVDLGIGGFSELARSKVEAFSDRFDAPLRVVELKK-EGIPIPEVVKKIK-RPACAVC 132
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIP 214
G +R + D +ATGHN DD + N+L + L + + E+G +
Sbjct: 133 GRIKRYYFNTEGLKGGFDVLATGHNLDDETSRLFSNVLHWKMEYLEDQSPVLPSEEGLLK 192
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDII 274
+ KPF E EI YA+FK +DY ++ C +S A + + +E P +D
Sbjct: 193 KVKPFFRLTEFEIA-AYAFFKNIDYLTSGCPFSKGATFSTYKRHLNRIEYDSPATKIDFY 251
Query: 275 KSG-ENFRISTSTKMPEQGT-CERCGYISSQKWCKACVL 311
+ +N R + K E+ T C CGY + + C C L
Sbjct: 252 QGFLKNLRPLLNKKNKEELTRCRVCGYPTFGEVCFVCRL 290
>gi|240104187|ref|YP_002960496.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239911741|gb|ACS34632.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 304
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 15/298 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++ A +K +C E F E FE ++ + I ++ K E++ + SGGKDS
Sbjct: 3 CKFC-EKPAFIKLHYPKMYLCEEHFKEYFERKVKRTIERYKMLKPDEKVLVVVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A++L +L G ++ L I+ GI Y + S + K+ +PL IV K+L+G
Sbjct: 62 VTAYILKKL------GYNIECLHINLGIGEYSEKSEEYAKKQCEALEVPLHIVRVKELFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E V + C++CG+ +R ++ A D +ATGHN DD A + N++ +
Sbjct: 116 KGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNMMHWN 172
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ +T + +G + + KP E+E++ YA ++Y EC Y+ A
Sbjct: 173 TQYLAKQGPVTPAQFNGKLVKKVKPLYEVTEREVV-AYALANGIEYMMEECPYARGATTL 231
Query: 254 FAREFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + ++E RP ++ +K + E C+ CG SS + C C
Sbjct: 232 EYKAILNEMEEKRPGTKINFVKGFLRKKHLFEAELHETELRECKVCGMPSSGEICSFC 289
>gi|57641491|ref|YP_183969.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57159815|dbj|BAD85745.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 304
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 15/298 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R A +K +C E F E FE ++ + I ++ K E++ + SGGKDS
Sbjct: 3 CKFC-ERPAFIKLHYPKMYLCEEHFTEYFERKVKRTIERYKMLKPDEKVLVVVSGGKDSA 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A VL +L G ++ L I+ GI Y + + + + G PL IV K+L G
Sbjct: 62 VTAHVLKKL------GYNIECLHINLGIGEYSEKGERYAREQCEKIGAPLHIVRLKELLG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E V + C++CG+ +R ++ A D +ATGHN DD A + NI+ +
Sbjct: 116 YGIGE---VRTRRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFNNIMNWN 172
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ +T + +G + + KP E+E++ YA ++Y EC Y+ A
Sbjct: 173 TQYLAKQGPVTPSQFNGKLVKKVKPLYEVTEREVV-AYALANGIEYEIDECPYARGATTL 231
Query: 254 FAREFIKDLERLRPRAILDIIKS--GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + ++E RP ++ +K + K E C+ CG SS + C C
Sbjct: 232 EWKAILNEMEEKRPGTKINFVKGYLRKKHLFEAELKETELRECKVCGMPSSGEVCSFC 289
>gi|150020898|ref|YP_001306252.1| PP-loop domain-containing protein [Thermosipho melanesiensis BI429]
gi|149793419|gb|ABR30867.1| PP-loop domain protein [Thermosipho melanesiensis BI429]
Length = 287
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 23/305 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA +K P+ +C + F E FE +I + + ++ ++I + SGGKDS
Sbjct: 3 CQHC-RKKAIIKSPR----LCEDHFPEYFERKIGKFLDKFKI--KNKKILVSISGGKDSV 55
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V+++VLS+L ++N ++ F ID GI + + S EI + K+ + +Y
Sbjct: 56 VVSYVLSKLKEKYNLQIEYFF--IDLGIPIFSEKS------KEISLEVTKKLNNELIIYN 107
Query: 136 WTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
++ ++ +K C++CG+ RR L++ A D + GHN DD + N+
Sbjct: 108 LEKEDGFTIMDIKYKPCSYCGMIRRYILNKYAYENNFDYVVLGHNLDDEVFFLFNNMFNK 167
Query: 195 DIARLSRC--TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
+I++L R +T E I R KP + E+EI+ YA L Y C PN+ +
Sbjct: 168 NISQLQRTGPLTLTIKEKKLIGRIKPLYFLTEEEILL-YAKLNSLPYIGCAC---PNSLK 223
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
R+F ++E R + L+I+ + + + E C+ CGY ++ CK C
Sbjct: 224 STQRKFKTNIEFSRDQK-LNIVYTILEVKKYLPEEKVELKFCQNCGYPTTSDTCKFCKTK 282
Query: 313 EGLNR 317
E L R
Sbjct: 283 ERLRR 287
>gi|222099463|ref|YP_002534031.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
gi|221571853|gb|ACM22665.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
Length = 327
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C +R A++K ++C+E F E E + + I ++F+ +I I SGGKDS
Sbjct: 26 CTKC-KRDASVKLRHYNIKLCKEHFNEFIEGRVERAIKKFKMFRRDSKILIAVSGGKDSV 84
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G ++ L I G SG + + V++N G L IV + +
Sbjct: 85 SLWHMLKKL------GYEVDALFIRAGRSGMVQKAQEIVEKNAELLGTKLHIVDATEYFE 138
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + ++ + C+ CGV RR +++ A D + TGHN +D A +L NIL
Sbjct: 139 GLSTQEISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQ 198
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R L+ + +P+ KP YE++I YA + + C +S A
Sbjct: 199 EGYLERQWPLLPKTHEKLVPKAKPLVLNYEEDIKL-YATLNEIPHLEMACPFSVGATSLV 257
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ CE CGY ++ + C C L
Sbjct: 258 YKKVLRELEEDQPGITLNFYLGFLKRKKEPKYEVENLRECEECGYPTTAQVCSFCRL 314
>gi|20806605|ref|NP_621776.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|20515049|gb|AAM23380.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
Length = 301
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 14/298 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CTVCG-KPAIVKFPAHNSAFCEEHLDAFFLRQVSKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS--GYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V A+VL L G ++ +D GI+ + S + V+ ++ +PL+IV K+
Sbjct: 62 VTAYVLKRL------GYEVLGFFVDLGITQNDFSPRSREVVENFCKEHDIPLEIVDLKER 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG + E+ K C CGV +R ++ A + D +ATGH DD+A+ +L N++R
Sbjct: 116 YGKDIPEVAK--RQDRICAICGVTKRHLMNEYALSVNADALATGHTLDDMAKLLLANLMR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ L++ E G + KP + E EI+ +A + +C Y A
Sbjct: 174 WDLHHLAKGVPTLPAEPGFAKKIKPLAFQSEDEII-AFAKLHNIKPVEAKCPYGREAKYN 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + P + CE CG+ S C C
Sbjct: 233 RYQEALDMLEEKSPGIKRSFYKNYTKYAYLFEGTQARPPKVNCEVCGFPSVSPVCTFC 290
>gi|327401576|ref|YP_004342415.1| PP-loop domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327317084|gb|AEA47700.1| PP-loop domain protein [Archaeoglobus veneficus SNP6]
Length = 300
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 152/309 (49%), Gaps = 22/309 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +R +P + +CR+C+ E +E + + + K GE++ SGGKDS+
Sbjct: 3 CKKCGKRAVEKLKPYGI-ALCRDCYVEFYEGLVERSFKKFGIVKRGEKVLACVSGGKDSS 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ VLS L+ + ++ ++ L ID GI Y S++TV+ G+ L ++S + +G
Sbjct: 62 AMLGVLSRLSEKLDFEVE--ALHIDLGIGEYSKKSMKTVEELCGVLGIKLHVISVAE-FG 118
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T+D+I K C+ CG+ +R ++R A L D +ATGH A+DI N L G+
Sbjct: 119 FTIDDIP-----KKTCSACGIVKRYLMNRYARLNGFDVVATGHTAEDIISFFFKNWLSGN 173
Query: 196 IARLSRCTLITTGEDGPI-PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ + T D I R +P EKE + Y + L + +C P+A R
Sbjct: 174 FSWSEKLLPRTESFDERIVTRIRPLYDRSEKENLL-YVICRGLPFLLDDC---PHAPRDE 229
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQ---GTCERCGYISSQKWCK 307
+E + +E +P +L++ K E R+ + ++ E+ G C+ CG +++ C
Sbjct: 230 WKEIVYYIESRKPGFRRNFVLNLAKYLEE-RVHGTVEVEEKEEYGYCKLCGEVTTFDVCA 288
Query: 308 ACVLLEGLN 316
C L++ +
Sbjct: 289 FCRLVKKFS 297
>gi|170290828|ref|YP_001737644.1| tRNA(Ile)-lysidine synthase MesJ [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174908|gb|ACB07961.1| tRNA(Ile)-lysidine synthase MesJ [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 328
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 19/307 (6%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
RLC C +A T +C C V+ L G+++ + SGGKD
Sbjct: 2 RLCDICGSEEAIYTNYVTGASLCANCLMNSIRRRAWSVMKRELL--PGDKVMVAHSGGKD 59
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSI--DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
S+ LA +L++ LDL ++S+ DEG + YR S++ ++ + + + +
Sbjct: 60 SS-LALLLTKEFSDEVRELDLKVISVTLDEG-TLYRRSSIELARKLAERLRVRHLTIQMR 117
Query: 132 DLYGWTMDEIVKVI--GLKNN-CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
D+ G++++++ I G K N CT+CGV RRQ L+ A + + TGHN DD+ +T +
Sbjct: 118 DILGFSLEDLRLAIPKGWKRNACTYCGVLRRQILNAVAREIGATVLVTGHNLDDLIQTSI 177
Query: 189 LNILRGDIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+N++RGD L + E+G +PR +P KY YE+EI + +C +
Sbjct: 178 MNLVRGDANALVKTMRHERKYEEGLVPRVRPLKYVYEREIASLVVALGIPAHLG-KCPLA 236
Query: 248 PNAYRGFARE--FIKDLER-LRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
G RE FI+D + RA L + ++ S + C CG ++
Sbjct: 237 QGMRIGIRREIDFIEDSNPGSKLRAFLFLENLSSKMKVDVSLR-----RCSLCGEPTTSD 291
Query: 305 WCKACVL 311
CKAC L
Sbjct: 292 ICKACQL 298
>gi|326391761|ref|ZP_08213282.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
gi|345016526|ref|YP_004818879.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392940098|ref|ZP_10305742.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermoanaerobacter siderophilus SR4]
gi|325992199|gb|EGD50670.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
gi|344031869|gb|AEM77595.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392291848|gb|EIW00292.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermoanaerobacter siderophilus SR4]
Length = 297
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 14/298 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CTVC-RKPAIVKFPAHNSAFCEEHLDAFFMRQVAKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V FVL L G ++ ID GI + + S + V+ + +PL+IVS K+
Sbjct: 62 VTTFVLKRL------GYEVLGFFIDLGIEENNFSSRSREVVENFCKENDIPLEIVSLKEK 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+ + ++ K C CGV +R ++ +K D +ATGH DD+A+ +L N+ R
Sbjct: 116 FRKGIPDVAK--HQDRICALCGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ LS+ T + E G + KP + E+EI+ +A + + C YS A
Sbjct: 174 WDLHHLSKGTPVLPEEPGFARKIKPLAFQAEEEII-AFAKLHNIKPVTAVCPYSREAKYT 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + ++ P + CE CG+ S C C
Sbjct: 233 RYQEALDMLEENSPGIKRSFYKNYTKYAHLFAGTSARPPKINCEVCGFPSVSPVCTFC 290
>gi|317484593|ref|ZP_07943497.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924133|gb|EFV45315.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 303
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 137/309 (44%), Gaps = 14/309 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C A + P C CF + F ++ + I +LF +RI + SGGKDS
Sbjct: 2 ICKRCKSATAIISLPSHNTGFCENCFRDFFSAQVARGIETGKLFTHEDRILVALSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L + EL+R+ G D+ L ID GI G + ++R ++G L IV
Sbjct: 62 LSL---MLELSRQ---GYDVTGLHIDLGIPGSSEIVRGVIERFCGKHGFKL-IVKEMAKE 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + +VK + C+ CG +R ++ A +ATGHN DD + N LR
Sbjct: 115 GLAIP-LVKQRLKRPICSACGKIKRHYFNKTALEEGFTALATGHNLDDEIARLFSNTLRW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA---- 250
D+ LS GEDG + KPF E E TYA+ + +++ T C YS A
Sbjct: 174 DVGYLSDQGPRLDGEDGFARKVKPFWRLTEFETA-TYAFLEEIEHHHTPCPYSAGASFTY 232
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTSTKMPEQGTCERCGYISSQKWCKAC 309
Y+G + +++ + +D +K G + F T+ C CGY +S C C
Sbjct: 233 YKGLWNQLEEEMPGRKLSFYVDFLKRGRSAFAGLERTEGDALAPCTVCGYPTSSGVCGVC 292
Query: 310 VLLEGLNRG 318
+ E + G
Sbjct: 293 RIREVVKEG 301
>gi|344255476|gb|EGW11580.1| Cytoplasmic tRNA 2-thiolation protein 1 [Cricetulus griseus]
Length = 284
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Query: 183 IAETVLLNILRGDIARLSRCTLI-TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
+AETVL+N LRGD RL+R ++ + GE +PRC+P ++ +KE++ YA+F+RL YFS
Sbjct: 1 MAETVLMNFLRGDAGRLARGGVLGSAGEGCALPRCRPLQFASQKEVVL-YAHFRRLRYFS 59
Query: 242 TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKS 276
EC+Y+P A+RG AR+ +K LE RP A+LD++ S
Sbjct: 60 EECVYAPEAFRGHARDLLKRLEAARPSAVLDLVHS 94
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 292 GTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
GTC RCG ++S C+AC LL+GLNRGLP++ I + R
Sbjct: 191 GTCSRCGALASHTLCQACALLDGLNRGLPRLAIGKGR 227
>gi|328950002|ref|YP_004367337.1| PP-loop domain-containing protein [Marinithermus hydrothermalis DSM
14884]
gi|328450326|gb|AEB11227.1| PP-loop domain protein [Marinithermus hydrothermalis DSM 14884]
Length = 328
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 26/309 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C Q R L +C + E FE + + I +++ + G+R+ + SGGKDS
Sbjct: 3 CRKCTQNAQVELRRHGL-ALCAAHYLEWFEAQTARAIRRHKMIREGDRVLVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL+ L G + L I GI Y + + + R + GLPL +V + YG
Sbjct: 62 ALWEVLTRL------GYEATGLHIQLGIGEYSERAYEVTTRFARERGLPLIVVDLAESYG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ G + C+ CG+ +R ++ A + +ATGHN DD A +L N+LR
Sbjct: 116 LGVPELSLATG-RVACSGCGLSKRYLMNEVAREEGFNVVATGHNLDDEAAVLLGNVLRWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L R + +G R KPF E+E+ +YA +R+ Y EC + A
Sbjct: 175 TDALPRQGPVLPEREGLARRIKPFYLFTEREVA-SYALLRRIAYQHEECPNATGAKSLLY 233
Query: 256 REFIKDLERLRP-----------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
+E + LE P + I I+ G + + E CERCG ++ +
Sbjct: 234 KEALNRLEERMPGTKQAFLEQFLKKIQPILAEGLG---AQEVALKE---CERCGAPTTGE 287
Query: 305 WCKACVLLE 313
C C L +
Sbjct: 288 TCAFCRLWD 296
>gi|169831320|ref|YP_001717302.1| PP-loop domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638164|gb|ACA59670.1| PP-loop domain protein [Candidatus Desulforudis audaxviator MP104C]
Length = 297
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 20/291 (6%)
Query: 29 PKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRH 88
P C E + F ++ + I Q+ + GER+ + SGGKDS +A VL L
Sbjct: 15 PAHNANFCAEHLDQFFLRQVEKTIRRYQMLQPGERVLVAVSGGKDSLTVADVLDRL---- 70
Query: 89 NYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIG 146
G + + +D GI +G+ +S + GLPL+I S K+ +G + +K +G
Sbjct: 71 --GYAVRGVHVDLGIDDNGFSSESTALCREFFTARGLPLEIYSLKERFGRS----IKDVG 124
Query: 147 LKNN--CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTL 204
+ N C+ CG+ +R ++ A +D +ATGHN DD++ + N++R D L++
Sbjct: 125 RRFNRFCSICGMTKRHVMNARAVEQGLDALATGHNLDDLSAALFANLMRWDRRYLAKGLP 184
Query: 205 ITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
E G + KP EKEI TYA + + + C YS A +E + +E
Sbjct: 185 SLPPEGGFCRKIKPLALLSEKEIA-TYAAVRDIRMVTATCPYSREAKFKRYKELLAAVEH 243
Query: 265 LRP---RAILD-IIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
P R+ + +K+ F++ P G C CG ++ + C C L
Sbjct: 244 QSPGTKRSFYEGYVKTASVFQVGGQAA-PALGPCAVCGMPTTVEVCTFCKL 293
>gi|302390349|ref|YP_003826170.1| PP-loop domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302200977|gb|ADL08547.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 316
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C +CF + E++ + I ++F +R+ + SGGKDS L +L + G D+
Sbjct: 21 FCSDCFQVYYSEQVRRNIRREKMFGPKDRVLVVVSGGKDSMALWHILLK------EGYDV 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ I+ GI Y + S + V+R ++ PL + + + YG + + + I ++ C+ C
Sbjct: 75 TAMYINLGIGDYSERSQEVVERFSEEHEAPLIVKNIEKEYGLNIPWLAREIR-RSTCSLC 133
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR-CTLITTGEDGPI 213
G +R ++ A D +ATGHN DD A T+L N+L L+R ++ + +
Sbjct: 134 GTIKRYLFNKVALDEGFDVVATGHNLDDEAATLLGNVLSWQEGYLARQSPVLPSTHPKLV 193
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP----RA 269
+ KP E+E + Y F + + EC ++ A +E + LE P R
Sbjct: 194 KKVKPLFTLTERENL-AYVLFNGISFIHEECPHALGASSILYKEVLNKLEEASPGTKQRF 252
Query: 270 ILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
+ + +K G +NF + T P+ C CG +++ + C C L
Sbjct: 253 LTNFLKKGRKNFEACSET--PDLRECSICGQVTTAEVCSFCRL 293
>gi|188997411|ref|YP_001931662.1| PP-loop domain-containing protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932478|gb|ACD67108.1| PP-loop domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 304
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 136/309 (44%), Gaps = 29/309 (9%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C+ +KA + P+ C++ + E F+ + + I ++F +I + SGGKD
Sbjct: 2 RKCYKCD-KKAQVYLPQHRLAFCKDHYSEWFDNRVEKTIKEFKMFDKNSKILVAVSGGKD 60
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L L++L Y +D F +++ GI Y S + + + G L IV KD
Sbjct: 61 SLSLWNALAKLG----YNVDGFYINL--GIGDYSQKSKELALKFAEKIGKTLHIVELKDE 114
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+ E+ K + C+ CG +R +++ A L D IATGHN DD A + N L
Sbjct: 115 IA-TIPEM-KTYDNRPACSICGTIKRYFMNKKAKELGYDIIATGHNLDDEAAVLFSNTLN 172
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ L R + E+G I + KP EKE YA ++Y EC YS A
Sbjct: 173 WSVEYLKRQYPVLKEENGFIRKVKPLCKISEKESAM-YAILSGIEYIEEECPYSVGATSI 231
Query: 254 FAREFIKDLERLRP-----------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
+ F+ LE P R + I++S E + E G CE CG S
Sbjct: 232 DYKLFLSQLEEKSPGTKLRFYSEFLRKMYPILQSYE--------EKVELGRCEICGEPSM 283
Query: 303 QKWCKACVL 311
+ C C L
Sbjct: 284 NRICSYCSL 292
>gi|345888473|ref|ZP_08839556.1| hypothetical protein HMPREF0178_02330 [Bilophila sp. 4_1_30]
gi|345040642|gb|EGW44879.1| hypothetical protein HMPREF0178_02330 [Bilophila sp. 4_1_30]
Length = 303
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 137/309 (44%), Gaps = 14/309 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
+C C A + P C CF + F ++ + I +LF +RI + SGGKDS
Sbjct: 2 ICKRCKSATAIISLPSHNTGFCENCFRDFFSAQVARGIETGKLFTHEDRILVALSGGKDS 61
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L + EL+R+ G D+ L ID GI G + ++R ++G L IV
Sbjct: 62 LSL---MLELSRQ---GYDVTGLHIDLGIPGSSEIVRGVIERFCGKHGFKL-IVKEMAKE 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + +VK + C+ CG +R ++ A +ATGHN DD + N LR
Sbjct: 115 GLAIP-LVKQRLKRPICSACGKIKRHYFNKTALEEGFTALATGHNLDDEIARLFSNTLRW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA---- 250
D+ LS GE+G + KPF E E TYA+ + +++ T C YS A
Sbjct: 174 DVGYLSDQGPRLDGENGFARKVKPFWRLTEFETA-TYAFLEEIEHHHTPCPYSAGASFTY 232
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN-FRISTSTKMPEQGTCERCGYISSQKWCKAC 309
Y+G + +++ + +D +K G + F T+ C CGY +S C C
Sbjct: 233 YKGLWNQLEEEMPGRKLSFYVDFLKRGRSAFAGLERTEGDALAPCTVCGYPTSSGVCGVC 292
Query: 310 VLLEGLNRG 318
+ E + G
Sbjct: 293 RIREVVKEG 301
>gi|15642970|ref|NP_228012.1| hypothetical protein TM0197 [Thermotoga maritima MSB8]
gi|403252998|ref|ZP_10919303.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
gi|418046133|ref|ZP_12684227.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|4980693|gb|AAD35289.1|AE001704_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351675686|gb|EHA58846.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|402811760|gb|EJX26244.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
Length = 304
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A++K ++C+E F E E+ + + I ++F +I I SGGKDS
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G ++ L I G SG + + V++N L IV + +G
Sbjct: 62 SLWHMLKKL------GYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATEYFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + ++ + C+ CGV RR +++ A D + TGHN +D A +L NIL
Sbjct: 116 GLSTQEISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQ 175
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R L+ + +P+ KP YE++I YA + + C +S A
Sbjct: 176 EGYLERQWPLLPKTHEKLVPKAKPLVLNYEEDIKL-YATLNEIPHLEMACPFSVGATSLV 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ C+ CGY ++ + C C L
Sbjct: 235 YKKILRELEEEQPGITLNFYLGFLKRKKEPKFEVEGLRECKECGYPTTAEVCSFCRL 291
>gi|148269863|ref|YP_001244323.1| PP-loop domain-containing protein [Thermotoga petrophila RKU-1]
gi|147735407|gb|ABQ46747.1| PP-loop domain protein [Thermotoga petrophila RKU-1]
Length = 304
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A++K ++C+E F E E+ + + I ++F +I I SGGKDS
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G ++ L I G SG + + V++N L IV + +G
Sbjct: 62 SLWHMLKKL------GYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATEYFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + ++ + C+ CGV RR +++ A D + TGHN +D A +L NIL
Sbjct: 116 GLSTQEISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQ 175
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R L+ + +P+ KP YE++I YA + + C +S A
Sbjct: 176 EGYLERQWPLLPKTHEKLVPKAKPLVLNYEEDIKL-YATLNEIPHLEMACPFSVGATSLV 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ C+ CGY ++ + C C L
Sbjct: 235 YKKILRELEEEQPGITLNFYLGFLKRKKEPKFEVEGLRECKECGYPTTAEVCSFCRL 291
>gi|288817937|ref|YP_003432284.1| ATPase, PP-loop superfamily [Hydrogenobacter thermophilus TK-6]
gi|384128698|ref|YP_005511311.1| Rhodanese domain-containing protein [Hydrogenobacter thermophilus
TK-6]
gi|288787336|dbj|BAI69083.1| ATPase, PP-loop superfamily [Hydrogenobacter thermophilus TK-6]
gi|308751535|gb|ADO45018.1| Rhodanese domain protein [Hydrogenobacter thermophilus TK-6]
Length = 440
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 22/324 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + +A + +++C++CF + F + +V+ ++FK GER+A+ SGGKDS
Sbjct: 31 CSRCKKNEAIINLAYARQRLCKDCFNDFFVNRVRRVVEEFRMFKPGERVAVAVSGGKDSV 90
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L + D++ I+ GI Y D + V G+P++I + K+ G
Sbjct: 91 ALLHALKKAFPEQ----DIYAFYINLGIKYYSDHLEKKVIELAEMVGVPIEIYNLKEKEG 146
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T+D+ + C+ CG+ +R A + D +ATGHN DD T++ GD
Sbjct: 147 YTIDDFLLTKYKNKMCSVCGLIKRNIFTTLAVRVNADTVATGHNLDDTVSTMMSLFFAGD 206
Query: 196 IARLSRCTLITTGEDGPIPR-CKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
++R + PR KP T E E ++ Y L C +
Sbjct: 207 FEGIARLKPVLKPLIKGQPRKIKPLITTPEIEDLY-YVALNELPVQECGCPHGEFTPIKG 265
Query: 255 AREFIKDLERLRPRA---ILDIIKSGENFRISTSTKMPEQGT-----CERCGYISSQKWC 306
++++ ++E+ +P +L + + F + E+G C CG SS + C
Sbjct: 266 MKKWLDEMEKEQPDIKFRLLSVFR--RKFIPLVDRGLGEEGVEEVRACTVCGMPSSSEIC 323
Query: 307 KACVLLEGLNRGLPKMGIVRSRGQ 330
C R + M I RG+
Sbjct: 324 SKC------RRVMELMEIKERRGE 341
>gi|206900215|ref|YP_002251379.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
gi|206739318|gb|ACI18376.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
Length = 318
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 17/300 (5%)
Query: 16 CSTC-NQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C+ C N+ ++R T C+E F E ++ + I ++F+ ++I + SGGKDS
Sbjct: 3 CTKCHNEATIYIRRHNT--AFCKEHFIEYIYGQVEKAIKKYKMFEKTDKILVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L+ L G + L ID GIS Y + S + ++ L L +VS KD+Y
Sbjct: 61 LALWDILNSL------GYNSDGLYIDLGISEYSEKSKEVAQKFAESRNLKLHVVSIKDIY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + EI K C+ CGV +R ++ A L+ IATGHN DD + +L NIL
Sbjct: 115 GVGIKEIAHK-NRKPPCSTCGVIKRYIMNLTAKELQYKVIATGHNLDDESAILLGNILHW 173
Query: 195 DIARL-SRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA--- 250
I L ++ ++ E G + KP E E Y K+++Y EC S +A
Sbjct: 174 QIDYLKAQSPILFEDEAGFARKVKPLYRISEYETS-AYCIMKKIEYILDECPMSIDAQSL 232
Query: 251 -YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
Y+G KD + + ++ G+N+ I ++ + +C+ C ++ + C C
Sbjct: 233 RYKGMLNTLEKDSPGTKEQFYFGFLEKGKNYFIPEKREI-KLNSCKICEQPTTSEICGFC 291
>gi|254479732|ref|ZP_05093019.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034329|gb|EEB75116.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 310
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 14/298 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CTVCG-KPAIVKFPAHNSAFCEEHLDAFFLRQVSKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS--GYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V A+VL L G ++ +D GI+ + S + V+ ++ +PL++V K+
Sbjct: 62 VTAYVLKRL------GYEVLGFFVDLGITQNDFSPRSREVVENFCKEHDIPLEVVDLKEK 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG + E+ K C CGV +R ++ A + +ATGH DD+A+ +L N++R
Sbjct: 116 YGKGIPEVAK--RQDRICAICGVTKRHLMNEYALSVNAHALATGHTLDDMAKLLLANLMR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ L++ E G + KP + E EI+ +A + +C Y A
Sbjct: 174 WDLHHLAKGIPTLPAEPGFAKKIKPLAFQSEDEII-AFAKLHNIKPVEAKCPYGREAKYN 232
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + P + CE CG+ S C C
Sbjct: 233 RYQEALDMLEEKSPGIKRSFYKNYTKYAYLFEGTQARPPKVNCEVCGFPSVSPVCTFC 290
>gi|237755420|ref|ZP_04584046.1| PP-loop domain protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692420|gb|EEP61402.1| PP-loop domain protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 304
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 136/309 (44%), Gaps = 29/309 (9%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C+ +KA + P+ C++ + E F+ + + I ++F +I + SGGKD
Sbjct: 2 RKCYKCD-KKAQVYLPQHRLAFCKDHYLEWFDNRVEKTIKEFKMFDKNSKILVAVSGGKD 60
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L L++L Y +D F +++ GI Y S + + + G L IV KD
Sbjct: 61 SLSLWNALAKLG----YNVDGFYINL--GIGDYSQKSKELALKFAKKIGKTLNIVELKDE 114
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+ E+ K + C+ CG +R +++ A L + IATGHN DD A + N L
Sbjct: 115 IA-TIPEM-KTYDNRPACSICGTIKRYFMNKKAKELGYNIIATGHNLDDEAAVLFSNTLN 172
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
I L R + E+G I + KP EKE YA ++Y EC YS A
Sbjct: 173 WSIEYLKRQYPVLKEENGFIRKVKPLCKISEKESAI-YAILSGIEYIEEECPYSVGATSI 231
Query: 254 FAREFIKDLERLRP-----------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISS 302
+ F+ LE P R + I++S E + E G CE CG S
Sbjct: 232 DYKLFLSQLEEKSPGTKLRFYSEFLRKMYPILQSYE--------EKVELGRCEICGEPSM 283
Query: 303 QKWCKACVL 311
+ C C L
Sbjct: 284 NRICSYCSL 292
>gi|260892095|ref|YP_003238192.1| PP-loop domain-containing protein [Ammonifex degensii KC4]
gi|260864236|gb|ACX51342.1| PP-loop domain protein [Ammonifex degensii KC4]
Length = 307
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C A +K P C+E F F +I + I ++ G R+ + SGGKDS
Sbjct: 3 CRVCGG-PAFIKLPAHNAAFCQEHFDTFFLRQISRTIKKYRMLPPGARVVVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V AFVL L G ++ +D GI + + DS + V+ + +PL++ S K+
Sbjct: 62 VTAFVLKRL------GYEVLGFFVDLGIEENNFSLDSRRAVEDFCREKEIPLEVFSLKEK 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G T+ E+ + + C CGV +R ++ A + +ATGH DD+A ++L N+ R
Sbjct: 116 FGKTIPEVAR--RQERICALCGVTKRHLMNEYALAVNAYALATGHTLDDMAASLLANLTR 173
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
D+ L++ + E G + KP EKEI+ +A + + +C Y+ A
Sbjct: 174 WDLHYLAKGLPVLPPEPGFARKIKPLALQGEKEIL-AFAELHGIKPTTAQCPYAAEAKFK 232
Query: 254 FAREFIKDLERLRP---RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + LE P RA + + + R P + C CG+ S C C
Sbjct: 233 RYKAVLNMLEEKSPGLKRAFYEGY-TQQAHRFVDPAARPPRVNCLVCGFPSVSPVCTFC 290
>gi|167040416|ref|YP_001663401.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300913703|ref|ZP_07131020.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
gi|307723282|ref|YP_003903033.1| ATPase [Thermoanaerobacter sp. X513]
gi|166854656|gb|ABY93065.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300890388|gb|EFK85533.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
gi|307580343|gb|ADN53742.1| ATPase [Thermoanaerobacter sp. X513]
Length = 297
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 18/300 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A +K P C E F ++ + I ++ R+ + SGGKDS
Sbjct: 3 CIVCG-KPAIVKFPAHNSAFCEEHLDAFFLRQVSKTIEKYKMLPPKGRVVVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGIS--GYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
V A+VL +L G ++ ID GI+ + S + V+ ++ +PL+IV K
Sbjct: 62 VTAYVLKKL------GYEVLGFFIDLGITQNDFSPRSREVVENFCKEHDIPLEIVDLKAG 115
Query: 134 YGWTMDEIVKVIGLKNN--CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
YG + E+ K K++ C CGV +R ++ + D +ATGH DD+A+ +L N+
Sbjct: 116 YGKGIPEVAK----KHDRICAICGVTKRHLMNEYTLAVNADALATGHTLDDMAKLLLANL 171
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
+R D+ L++ E G + KP + E EI+ +A + +C Y A
Sbjct: 172 MRWDLHHLAKGIPTLPAEPGFAKKIKPLAFQSEDEII-AFAKLHNIKPVEAKCPYGREAK 230
Query: 252 RGFAREFIKDLERLRPRAILDIIKSGENFR--ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P K+ + + P + CE CG+ S C C
Sbjct: 231 YNRYQEALDMLEEKSPGIKRSFYKNYTKYAYLFEGTQARPPKINCEICGFPSVSPVCTFC 290
>gi|313679560|ref|YP_004057299.1| pp-loop domain protein [Oceanithermus profundus DSM 14977]
gi|313152275|gb|ADR36126.1| PP-loop domain protein [Oceanithermus profundus DSM 14977]
Length = 329
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 26/309 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C A ++ + + C E + F E + I +++ + G+RI + SGGKDS
Sbjct: 3 CSVCGA-PAQVEVRRRNQAFCAEHYRAWFVNETRRNIKRHRMIRPGDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL L+ L G I GI Y +L+ + GL L +V + +G
Sbjct: 62 VLWDTLARL------GHAATGFHIQLGIGDYSQRALEATRAFAAARGLELIVVDVRQSFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+ ++ + G + C+ CG+ +R ++R A + +ATGHN DD A T+L N+
Sbjct: 116 LTIPQLAQATG-RAACSGCGLSKRYLMNRVAEEEGFNVVATGHNLDDEAATLLGNVSHWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ L R + G +G R KP YT+ + + YA+ + Y EC ++ A
Sbjct: 175 LDALVRQGPMLEGREGLARRIKPL-YTFTEREVAAYAFLAGIAYQHEECPHAEGAKSLLY 233
Query: 256 REFIKDLERLRP-----------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
++ + LE P + + ++K G + E CERCG +++
Sbjct: 234 KDVLGRLETRMPGTKQVFLEQYLKKVQPVLKEG------LAEGEVELRRCERCGQVTTGA 287
Query: 305 WCKACVLLE 313
C C L +
Sbjct: 288 VCAHCKLWD 296
>gi|374635475|ref|ZP_09707073.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
gi|373562125|gb|EHP88343.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
Length = 302
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 21/300 (7%)
Query: 16 CSTCN-QRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C + +K PK +C+E F E FE+ + + I ++ K +++ I SGGKD
Sbjct: 3 CKICKGEVYITIKYPKM--ALCKEHFIEYFEKRVKKTIKKYEMIKPEDKVLIAISGGKDG 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V+ +VL +L G ++ L I+ GI + SL+ VK+ G+ IV K+L
Sbjct: 61 AVVTYVLKKL------GYNVECLHINLGIGEFSKKSLECVKKQTSYIGVRCHIVDLKELT 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + E V K C+ CG +R + + A + I TGHN DD A +L N++
Sbjct: 115 GKGIPE---VKSRKPKCSICGTAKRYIVSKFACDNGFNVIVTGHNLDDEASFILNNVMNW 171
Query: 195 DIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L+R I + G +P + KP E+EI +YA L+ FS +C ++ A
Sbjct: 172 STGYLARQGPILP-QKGKLPKKVKPLYELTEEEIS-SYAEVVGLEVFSEKCPFAKKAITL 229
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + +E RP R ++ +K+ F +P C+ CG SS + C C
Sbjct: 230 EYKEMLNKIEETRPGTKYRFVIGYLKNRHLFEKEIED-IPLM-ECKICGMPSSGEVCSFC 287
>gi|298530265|ref|ZP_07017667.1| PP-loop domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509639|gb|EFI33543.1| PP-loop domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 299
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ AA+ P C ECF F ++ + I LF +RI I SGGKDS
Sbjct: 3 CTRC-KKIAAVALPSHNAGFCPECFKVFFSRQVEKAIKERTLFSKEDRILIALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA L H G + L ID I G + + V+R G+ L ++ + G
Sbjct: 62 ALAREL------HLLGYNTAGLYIDLAIPGSSETARDHVERFCRDLGISLHVLEMEK-EG 114
Query: 136 WTMDEIVKVIGLKNNCTFCG-----VFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+ E+ K + C+ CG F R ALD G S+L ATGHN DD A + N
Sbjct: 115 MPIPEVRKKFN-RPVCSVCGRIKRYYFNRFALDNGFSVL-----ATGHNLDDEAARLFSN 168
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
++R D++ L E G + + KP E E Y++ +DY C YS A
Sbjct: 169 VMRWDVSYLGSQGPDLPAEQGFVRKVKPLYRLSEFETA-NYSFLAGIDYCYAPCPYSKGA 227
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGEN-----FRISTSTKMPEQGTCERCGYISSQKW 305
+ + + +LE +P + + N F + G C RCGY ++
Sbjct: 228 SFTYYKYLLDELEHEQPGRKISFYEGFLNRGRQAFDHIDQEGGEKPGPCPRCGYPTTGDI 287
Query: 306 CKACVLLEGLNR 317
C C + E ++R
Sbjct: 288 CGVCRIREVMHR 299
>gi|410582736|ref|ZP_11319842.1| TIGR00269 family protein [Thermaerobacter subterraneus DSM 13965]
gi|410505556|gb|EKP95065.1| TIGR00269 family protein [Thermaerobacter subterraneus DSM 13965]
Length = 304
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A + + C E F+E F+ ++ + I +++F +RI + SGGKDS
Sbjct: 3 CTKCGE-PAVVPIRRHNAAFCTEHFFEYFDNQVQRAIKEHRMFTKNDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ VL L G + ID GI Y S + V+ + G L+IVS ++ YG
Sbjct: 62 AVWDVLLRL------GYEAHGFYIDLGIGEYSKRSTEKVRNFAAERGATLRIVSVEEEYG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
E+ + + + C+ CG+ +R ++ A D I TGHN DD A T+L N+L +
Sbjct: 116 LGTQELARKV-RRPACSACGLNKRYLFNKVALEGGYDVIVTGHNLDDEAATLLSNVLHWN 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R ++ + + KP E+EI +Y + +DY EC + A
Sbjct: 175 TGYLARQAPVLEATAPNLVKKVKPLFRLTEREIA-SYCVLRGIDYIVEECPMAKGAKSIQ 233
Query: 255 AREFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+ + LE L P ++ G + E C CG ++ + C C
Sbjct: 234 YKHILNQLEELSPGTKAAFFFGFLERGRQ-HFEEEREQVEIRPCTVCGQPTTTEICAHCR 292
Query: 311 LLE 313
+L+
Sbjct: 293 MLQ 295
>gi|258405487|ref|YP_003198229.1| PP-loop domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797714|gb|ACV68651.1| PP-loop domain protein [Desulfohalobium retbaense DSM 5692]
Length = 299
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 14/300 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A + P C CF + F+ ++ + I +LF +RI + SGGKDS
Sbjct: 3 CKRCKE-PAVVALPSHHTGFCEPCFLQFFQRQVKRAIKEERLFTPEDRILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + L +L G ++ L +D GI D + + Q +PL IVS ++ G
Sbjct: 62 ALLWQLRDL------GYNVHGLHVDLGIPDSSDRAKTAIAAFCDQQAIPLHIVSTEEA-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + I + C+FCG +R + A + +ATGHN DD + N L
Sbjct: 115 VAIPDLAERID-QPVCSFCGKIKRHFFNTYAVEHGFNVLATGHNLDDEVSRLFANTLGWK 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L+ + ++G + KP Y + + + + K +++ C YS A
Sbjct: 174 TDYLATQGPLLPADNGFARKVKPL-YRHSEFETAAFCFLKGIEHVKAPCPYSQGASFTLY 232
Query: 256 REFIKDLERLRPRAIL----DIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ + DLE +P L + ++ +N + K P C RCG +S + C C L
Sbjct: 233 KKLLNDLETEQPGRKLFFYQEFLRRAKNSFQDHAPKHPPIAPCIRCGAPTSAEICSVCRL 292
>gi|170288548|ref|YP_001738786.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
gi|170176051|gb|ACB09103.1| PP-loop domain protein [Thermotoga sp. RQ2]
Length = 304
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A++K ++C+E F E E+ + + I ++F +I I SGGKDS
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G ++ L I G SG + + V++N L IV + +
Sbjct: 62 SLWHMLKKL------GYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATEYFE 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + ++ + C+ CGV RR +++ A D + TGHN +D A +L NIL
Sbjct: 116 GLSTQEISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQ 175
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L R L+ + +P+ KP YE++I YA + + C +S A
Sbjct: 176 EGYLERQWPLLPKTHEKLVPKAKPLVLNYEEDIKL-YATLNEIPHLEMACPFSVGATSLV 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ C+ CGY ++ + C C L
Sbjct: 235 YKKILRELEEEQPGITLNFYLGFLKRKKEPKLEVEGLRECKECGYPTTAEVCSFCRL 291
>gi|281412254|ref|YP_003346333.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
gi|281373357|gb|ADA66919.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
Length = 304
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 9/297 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C + A++K ++C+E F E E+ + + + ++F +I I SGGKDS
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAVKKFKMFDRNSKILIAVSGGKDSV 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L +L G ++ L I G SG + + V++N L IV + +G
Sbjct: 62 SLWHMLKKL------GHEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATEYFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + ++ + C+ CGV RR +++ A + + TGHN +D A +L NIL
Sbjct: 116 GLSTQEIAIMLRRPVCSICGVVRRYLMNKFAYENGYNVVVTGHNLNDEASVLLGNILHWQ 175
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ R L+ + +P+ KP YE++I YA + + C +S A
Sbjct: 176 EGYMERQWPLLPKTHEKLVPKAKPLVLNYEEDIKL-YATLNEIPHLEMACPFSVGATSLV 234
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ +++LE +P L+ + ++ C+ CGY ++ + C C L
Sbjct: 235 YKKILRELEEEQPGITLNFYLGFLKRKKEPKLEVEGLRECKECGYPTTAEVCSFCRL 291
>gi|390938516|ref|YP_006402254.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191623|gb|AFL66679.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 321
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL----SELNRRHNYG 91
CRE F E FEE + + I +++ K G+R+ + SGGKDS L VL EL R G
Sbjct: 23 CREHFIEYFEERVVEAIRKHRMIKPGDRVVVAVSGGKDSMSLLTVLVKQARELGIREVIG 82
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNC 151
L L L GI G+ + V+ + G+ ++ +DL G ++ E+ + C
Sbjct: 83 LHLNL-----GIGGFSELVESVVREYCERLGVKCHVIHLRDLLGLSLPELASK-ARRPPC 136
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+ CG+ +R + + TGH+ DD+ + L NI GD L+ ++ E
Sbjct: 137 SVCGLVKRYVFTVSTMAVNASVLVTGHHLDDVVKYALKNIYVGDYRFLTSLKPVSVEEGL 196
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA----REFIKDLERLRP 267
P+ + +P E++I TYA + Y +C P + G A R FI +LE P
Sbjct: 197 PV-KARPLISVGERDIE-TYAKLSGIPYVEAKC---PFKHEGDAEKAVRIFISELEESNP 251
Query: 268 RAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVL 311
A L ++ S +G C CG SS + C C L
Sbjct: 252 GAKLTLLSSISKLIHEYIEPRESRGLTRCSICGMPSSGEVCGFCRL 297
>gi|289577704|ref|YP_003476331.1| PP-loop domain-containing protein [Thermoanaerobacter italicus Ab9]
gi|289527417|gb|ADD01769.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
Length = 300
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 15/307 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C +CF ++ ++ + I N++F+ GE++ SGGKDS
Sbjct: 3 CVRC-KKKAVIVLRRHNAAFCADCFLHYYKNQVLKNIRKNRMFEKGEKVLAVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L + G ++ + I+ GI Y + S + V++ + LPL + K +G
Sbjct: 62 ALWDILVK------EGYNVVAMYINLGIGEYSNRSQEVVEKFAKENNLPLIVKDIKKEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A +ATGHN DD A T+ N+L +
Sbjct: 116 LDIYKLSKTLR-RSPCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLFGNVLSWE 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R ++ I + KP E+E M+ Y ++++ EC +S A
Sbjct: 175 EGYLARQGPVLPQTHPKLIKKVKPLYTLTERENMY-YVLLNKIEFLHEECPHSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+E + LE P R + +K G+ K+ E C+ CG +++ + C C
Sbjct: 234 YKELLNKLEEESPGTKQRFLSGFLKKGKKHFQDVREKL-ELKECKNCGQVTTTEECSFCR 292
Query: 311 LLEGLNR 317
++ N+
Sbjct: 293 FVKICNQ 299
>gi|163782668|ref|ZP_02177665.1| hypothetical protein HG1285_17330 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882241|gb|EDP75748.1| hypothetical protein HG1285_17330 [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +K + P+ +CRE F FE + I ++F +R+ + SGGKDS
Sbjct: 7 CRICG-KKPIIYMPQHRLALCREDFISWFERYTERTIKDFRMFTNEDRVLVTVSGGKDSL 65
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL R+ Y D F L + GI Y + S + V+ + G + +V DL
Sbjct: 66 ALWHVL----RKLGYNADGFYLHL--GIGEYSERSRRKVEEFAERLGAKVIVV---DL-- 114
Query: 136 WTMDEIVKVIGLK-----NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
M+E+ + LK C+ CG+ +R +R A + +ATGHN DD A ++L N
Sbjct: 115 --MEELAGIPELKKATSREACSVCGLVKRYNFNRVAKEYGYNVVATGHNLDDEASSLLAN 172
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
++ ++ L R + E+G + + KPF EKE YA +++ EC YS +A
Sbjct: 173 VINWNVKYLGRKYPVLEEEEGFVRKVKPFCKFTEKETAL-YALLNGIEFVEEECPYSEDA 231
Query: 251 YRGFAREFIKDLERLRP----RAILDII-KSGENFRISTSTKMPEQGTCERCGYISSQKW 305
F +E + +E P R L+ + K FR + E C+ CG S +
Sbjct: 232 SSIFYKETLNRIEEKFPGTKLRFYLEYLRKVYPRFR---EVEERELQRCKVCGEPSPSEV 288
Query: 306 CKACVLLE 313
C C L E
Sbjct: 289 CPVCRLKE 296
>gi|78358650|ref|YP_390099.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78221055|gb|ABB40404.1| protein of unknown function UPF0021 [Desulfovibrio alaskensis G20]
Length = 302
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+ P C EC+ F ++ + I +L +R+ + SGGKDS
Sbjct: 3 CKRC-KATAAVALPSHHAGFCEECYDLFFTRQVEKGIRRQKLLTFEDRVLVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLS+L G ++ L ID I G + V+R ++G L IV G
Sbjct: 62 ALMLVLSKL------GYNVTGLHIDLAIPGSSPVARGVVERFCHKHGFKL-IVKEMAEEG 114
Query: 136 WTMDEIVKVIGLKNNCTFCG-----VFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+ +VK + C+ CG F + ALD G ++L ATGHN DD + N
Sbjct: 115 LAI-PLVKARLNRPVCSACGKIKRYFFNKTALDEGYTVL-----ATGHNLDDEIARLFSN 168
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
LR DIA LS E G + KP E E Y++ + ++Y C YS A
Sbjct: 169 TLRWDIAYLSDQGPALPAEGGFARKIKPLYRLSEFETA-NYSFLQGIEYHYAPCPYSQGA 227
Query: 251 YRGFAREFIKDLERLRPRAILDII-----KSGENFRISTSTKMPEQGTCERCGYISSQKW 305
++ DLE P LD + E F T + CERCGY +S +
Sbjct: 228 SFTQYKKLWADLEDQMPGRKLDFYLGFLERGKEIFARHEQTHGDQLQPCERCGYPTSAEV 287
Query: 306 CKACVLLEGLNR 317
C C + E ++R
Sbjct: 288 CGVCRIREAVSR 299
>gi|289547809|ref|YP_003472797.1| PP-loop domain-containing protein [Thermocrinis albus DSM 14484]
gi|289181426|gb|ADC88670.1| PP-loop domain protein [Thermocrinis albus DSM 14484]
Length = 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 15/300 (5%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C + KA++ P +C + + E FEE + + I + + +R+ + SGGKD
Sbjct: 2 RRCVKCKE-KASIYLPHHRLSLCSQHYVEWFEERVQRTIKQFGMMEKRDRVLVAVSGGKD 60
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L VL H G + L ID GI Y S + K+ + G L IV
Sbjct: 61 SLSLWQVL------HRLGYEADGLYIDLGIGDYSAKSKELCKKFSERIGRKLHIVDLSQE 114
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
T+ +I K + + C+FCG +R ++ A L +ATGHN DD +L N+L
Sbjct: 115 LS-TIPQI-KQLDSRPACSFCGSIKRYYMNLYAKKLGYTVVATGHNLDDETAVLLSNVLS 172
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
++ L R T + +DG + + KP E+E YA +DY EC ++ NA
Sbjct: 173 WNLQYLERQTPLLEEKDGFVRKVKPLCLLTERETAL-YAVVTNIDYIEEECPFAENATSI 231
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
++ + +E P R L+ ++ +S+ T+ C CG + + C C
Sbjct: 232 DYKKIMAQIEEKSPGTKLRFYLEFLRKVRP-ALSSGTQPVTLKPCSVCGEPTVGEICSLC 290
>gi|212703980|ref|ZP_03312108.1| hypothetical protein DESPIG_02033, partial [Desulfovibrio piger
ATCC 29098]
gi|212672593|gb|EEB33076.1| TIGR00269 family protein, partial [Desulfovibrio piger ATCC 29098]
Length = 354
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 129/289 (44%), Gaps = 17/289 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C +C+ + F ++ + I G +LF ERI + SGGKDS L + EL+R+ G D+
Sbjct: 73 FCPDCYLKFFARQVEKGIEGQKLFTRDERILVALSGGKDSLAL---MLELSRQ---GYDV 126
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMD-EIVKVIGLKNNCTF 153
L ID GI + V+R ++GL L + K+L + +VK + C+
Sbjct: 127 TGLHIDLGIPESSPVARGVVERFCAKHGLKLMV---KELAAEGLAIPLVKERLNRPVCSA 183
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPI 213
CG +R ++ A D +ATGHN DD + N LR D A LS GEDG
Sbjct: 184 CGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRWDTAYLSDQGPRLDGEDGFA 243
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILD- 272
+ KP E E YA+ +++ C YSP A + ++ LE P LD
Sbjct: 244 RKVKPLWRLSEFETA-NYAFLMGIEHHYAPCPYSPGASFSTLKALLQRLEAAMPGRKLDF 302
Query: 273 ----IIKSGENFRISTSTKMPEQGTCERCGY-ISSQKWCKACVLLEGLN 316
+ ++ F + + E C CGY SS C C + E L
Sbjct: 303 YQGFLARARPVFARREAEEGVELAPCTSCGYPTSSGDMCGVCRIREALK 351
>gi|15606536|ref|NP_213916.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
gi|2983761|gb|AAC07321.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
Length = 301
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 19/304 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C +KA + P +CRE F E FE+ + I ++F +++ + SGGKDS
Sbjct: 4 CRICG-KKAIIYMPHHRLALCREHFVEWFEKYTERTIKEFKMFTKKDKVLVAISGGKDSL 62
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTV-KRNEIQYGLPLKIVSYKDLY 134
L VL +L G + L I+ GI Y + S + V K E G + + ++L
Sbjct: 63 ALWHVLRKL------GYEADGLYINLGIGEYSEKSKEKVLKFAEKINGKAIIVDLKEELA 116
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + E+VK+ + C+ CG+ +R ++ A + IATGHN DD A +L N+L
Sbjct: 117 G--IPELVKITS-REACSVCGLVKRYNFNKVAKEHGYNVIATGHNLDDEASALLANVLNW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
+ L R + E G + + KPF EKE YA +D+ EC +S +A F
Sbjct: 174 NEKYLGRKYPVLEEEAGFVRKVKPFCKFTEKETAL-YALLNGIDFIEEECPFSEDATSVF 232
Query: 255 AREFIKDLERLRP----RAILDII-KSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
++ + ++E P R LD + K FR K + C+ CG + + C C
Sbjct: 233 YKKILNEIEERSPGTKLRFYLDYLRKIYPKFRKEEEKKELQ--PCKVCGEPTVGEICPVC 290
Query: 310 VLLE 313
L E
Sbjct: 291 RLRE 294
>gi|344997352|ref|YP_004799695.1| PP-loop domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965571|gb|AEM74718.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 303
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 15/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++K + + C ECF ++ ++ + I +++F +++ + SGGKDS
Sbjct: 3 CVRC-KKKGVIHLKRHNAAFCHECFLYYYKNQVKKNIKRHRMFDKKDKVLVVISGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L+ + G ++ + I+ GI Y D S Q V+ + GL L + K YG
Sbjct: 62 ALWHILA------SEGYNVTGMYINLGIGQYSDKSQQVVESFAQKNGLELIVKDIKKEYG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K++ ++ C+ CG +R ++ A +ATGHN DD A T+L N+L +
Sbjct: 116 LDIYKLSKLLK-RSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWE 174
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R + ++ + + + KP E+E +F Y ++++ EC ++ A
Sbjct: 175 EGYLARQSPVLESTHPKLVKKVKPLYTLTERENLF-YVLINKIEFLHDECPHAVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P R I ++ G K+ E C CG +++ + C C
Sbjct: 234 YKEVLNRLEEESPGTKQRFITSFLEKGRRHFQDAQEKL-ELRECSICGQVTTTEVCSFC 291
>gi|337288685|ref|YP_004628157.1| hypothetical protein TOPB45_1141 [Thermodesulfobacterium sp. OPB45]
gi|334902423|gb|AEH23229.1| protein of unknown function UPF0021 [Thermodesulfobacterium
geofontis OPF15]
Length = 408
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 15/311 (4%)
Query: 15 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
LC C + KA ++ P ++C+ C+ FE I + I ++ K +++ + SGGKDS
Sbjct: 20 LCKICKKEKALIEIPSQKIKVCKNCYNNFFENRIKKTIEKYKMIKPQDKVGVFLSGGKDS 79
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
+ L FVL +L ++L + I+ GI Y D VK +PL I + +
Sbjct: 80 STLLFVLKKLYP----DINLQAIFINLGIRYYSDKLEDLVKNFCKNLEVPLFIYNLPEKE 135
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G+ +D+ + C+ CG +R + A L+++ IATGH+ DD +L +G
Sbjct: 136 GYRIDDFIFTYFKDKVCSACGAIKRYLFSKIAKELELNVIATGHHLDDTISVMLNLFFQG 195
Query: 195 D---IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
D IA+L + + + KP T EKEI++ YA + + + +C ++
Sbjct: 196 DFLGIAKLQPS--LPPLFPNQVKKIKPLYTTPEKEILY-YAILNEIPFENFKCPHANVTP 252
Query: 252 RGFAREFIKDLE---RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ--KWC 306
+E + LE R +L + I ++ K C +CG I+S K C
Sbjct: 253 SKKIKELLTKLEDENRQIKYQLLSVFTKKLIPLIKSNYKEEVLSLCIKCGEITSSQDKIC 312
Query: 307 KACVLLEGLNR 317
C +E L +
Sbjct: 313 SRCKRIELLEK 323
>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 303
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 15/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++K + + C+ECF ++ ++ + I +++F +++ + SGGKDS
Sbjct: 3 CVRC-RKKGVIHLKRHNAAFCQECFLYYYKNQVKKNIKRHRMFDKEDKVLVVISGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L+ + G ++ + I+ GI Y D S Q V+ + GL L + K YG
Sbjct: 62 ALWHILA------SEGYNVTGMYINLGIGQYSDKSQQVVESFAQKNGLELIVKDIKKEYG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K++ ++ C+ CG +R ++ A +ATGHN DD A T+L N+L +
Sbjct: 116 LDIYKLSKLLK-RSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWE 174
Query: 196 IARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R + ++ + + + KP E+E +F Y ++++ EC ++ A
Sbjct: 175 EGYLARQSPVLESTHPKLVKKVKPLYTLTERENLF-YVLINKIEFLHDECPHAVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P R I ++ G K+ E C CG +++ + C C
Sbjct: 234 YKEVLNRLEEESPGTKQRFITSFLEKGRRHFQDAQEKL-ELRECSICGQVTTTEVCSFC 291
>gi|297544017|ref|YP_003676319.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841792|gb|ADH60308.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 300
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 15/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + + C +CF ++ ++ + I N++F+ GE++ + SGGKDS
Sbjct: 3 CVRC-KKKAVIVLRRHNAAFCADCFLHYYKNQVLKNIRKNRMFEKGEKVLVVVSGGKDSM 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L + G ++ + I+ GI Y + S + V++ + LPL + K +G
Sbjct: 62 ALWDILVK------EGYNVVAMYINLGIGEYSNRSQEVVEKFAKENNLPLIVKDIKKEFG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + ++ C+ CG +R ++ A +ATGHN DD A T+ N+L +
Sbjct: 116 LDIYKLSKTLR-RSPCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLFGNVLNWE 174
Query: 196 IARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L+R ++ I + KP E+E M+ Y ++++ EC +S A
Sbjct: 175 EGYLARQGPVLPQTHPKLIKKVKPLYTLTERENMY-YVLLNKIEFLHEECPHSVGARSIL 233
Query: 255 AREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P R + ++ G+ ++ E C+ CG +++ + C C
Sbjct: 234 YKEVLNKLEEESPGTKQRFLSGFLEKGKKHFQDVRERL-ELKECKNCGQVTTTEECSFC 291
>gi|218884033|ref|YP_002428415.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
gi|218765649|gb|ACL11048.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
Length = 321
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 127/291 (43%), Gaps = 21/291 (7%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVL----SELNRRHNYG 91
CRE F E FEE + + I ++ K G+ + I SGGKDS L VL EL R G
Sbjct: 23 CREHFIEYFEERVVETIRKYRMIKPGDSVVIAVSGGKDSMSLLTVLVKQARELGIREVIG 82
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNC 151
L L L GI G+ + V+ + G+ ++ +DL G ++ E+ + C
Sbjct: 83 LHLNL-----GIGGFSELVESVVREYCERLGVKCHVIRLRDLLGLSISELASK-ARRPPC 136
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
+ CG+ +R + + TGH+ DD+ + L NI GD L+ ++ E
Sbjct: 137 SVCGLVKRYIFTVSTMTVNASVLVTGHHLDDVVKYALKNIYVGDYRSLASLKPVSVEEGL 196
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA----REFIKDLERLRP 267
P+ + +P E++I TYA + Y +C P + G A R FI +LE P
Sbjct: 197 PV-KARPLISVGERDIE-TYAKLSGIPYVEAKC---PFKHEGDAEKAVRVFISELEESNP 251
Query: 268 RAILDIIKSGENFRISTSTKMPEQGT--CERCGYISSQKWCKACVLLEGLN 316
A L ++ S +G C CG SS C C L + ++
Sbjct: 252 GAKLTLLSSISKLIHEYIEPRESRGLTRCSICGMPSSSDVCSFCRLTKKVH 302
>gi|239618090|ref|YP_002941412.1| PP-loop domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506921|gb|ACR80408.1| PP-loop domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 307
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 140/321 (43%), Gaps = 28/321 (8%)
Query: 7 KSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAI 66
K KK G + Q AL C + + E F + + I ++F +I +
Sbjct: 2 KCKKCGAQAIIHLKQHNIAL---------CAKHYEEFFLSRVKKAIHMFKMFDKSSKILV 52
Query: 67 GASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLK 126
SGGKDS VL VL L + L ID GI Y + S + K L L
Sbjct: 53 AVSGGKDSLVLWDVLYRLEYQTEG------LYIDLGIGSYSETSKEKAKSFAKSRNLTLH 106
Query: 127 IVSY-KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE 185
I K L+G + E + K C+ CG+ +R +++ + IATGHN DD A
Sbjct: 107 IEDVRKYLHGLSTPEAAWKMRRKT-CSVCGLVKRYIMNKFSHEGDYKVIATGHNLDDEAA 165
Query: 186 TVLLNILRGDIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
T+L N+L L + ++ + P+ KP EKE+ T+A K ++Y EC
Sbjct: 166 TLLGNLLHWQTGYLGKQYPVLPKTHEKLTPKVKPLILVTEKEVA-TFAIMKGIEYIFEEC 224
Query: 245 IYSPNAYRGFAREFIKDLERLRP----RAILDIIKSGENFRIST--STKMPEQGTCERCG 298
+ A + + DLE +P R ++D K+ F + S K+ E C RCG
Sbjct: 225 PSARGASSIVYKRLLNDLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNE---CSRCG 281
Query: 299 YISSQKWCKACVLLEGLNRGL 319
Y ++Q+ C C L E L + L
Sbjct: 282 YPTTQEVCSFCKLTERLEQKL 302
>gi|218887418|ref|YP_002436739.1| PP-loop domain-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758372|gb|ACL09271.1| PP-loop domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 129/305 (42%), Gaps = 15/305 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A + P C ECF F ++ + I +LF +RI + SGGKDS
Sbjct: 3 CKRCKE-TAVVALPSHHTGFCAECFLLFFTRQVERGIKERKLFTHDDRILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L LS L G D+ L ID I G + V+R ++GL L IV G
Sbjct: 62 SLMLELSRL------GYDVTGLHIDLAIPGSSPAARGVVERFCEKHGLNL-IVKEMGAEG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C+ CG +R ++ A +ATGHN DD + N LR D
Sbjct: 115 LAIPDVKARLN-RPVCSACGKIKRYFFNKTALDENFTVLATGHNLDDEIARLFSNTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+A LS + G + KP E E YA+ +++ C YS A F
Sbjct: 174 VAYLSDQGPDLAADGGFARKVKPLWRLSEFETA-NYAFLMGIEHHYAPCPYSGGASFTFY 232
Query: 256 REFIKDLERLRPRAILDIIKSG-ENFRISTSTKMPEQGT----CERCGYISSQKWCKACV 310
++ + DLE P LD + E R + E G C RCGY +S + C C
Sbjct: 233 KKLLTDLEEEMPGRKLDFYQGFLERGRPVFARADNEDGVDLSGCTRCGYPTSNEVCGVCR 292
Query: 311 LLEGL 315
+ + L
Sbjct: 293 IRDAL 297
>gi|124026994|ref|YP_001012314.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123977688|gb|ABM79969.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 341
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 11/301 (3%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + AA R L ++C++ F E ++ + + + G +I + SGGKDS
Sbjct: 19 CSLCGEPAAAELRYARL-RLCKKHFIEFINRKVERTLRRVGALRKGVKILVAISGGKDSA 77
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V LS+L ++ YG++++ + + G + + V+ G+P +V + G
Sbjct: 78 VTLAALSDLAKK--YGIEVYAIHLRLGFGEFSAKVEERVRSLCNMLGIPCIVVDVAEAVG 135
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ I+ + C+ CG+ +R L+ A L D +A GHNADDI + L D
Sbjct: 136 DPV-HILARKARRPACSVCGLVKRYFLNASAIELGADYVALGHNADDIIAYSIKAFLNQD 194
Query: 196 IARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA-YRG 253
+ L++ +TT +D + R +P YEKE + YA + L +C + P A
Sbjct: 195 LEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVL-YAILRGLPVVFDKCPFRPEAPMED 253
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKM---PEQGTCERCGYISSQKWCKACV 310
+E I LE P + ++ E RI ++ + G C+ CG IS C C
Sbjct: 254 TIKEMINKLEDKHPGIKISFLRRLEK-RIKLYGELAGSAKPGRCKYCGLISQGDECSFCR 312
Query: 311 L 311
L
Sbjct: 313 L 313
>gi|376295914|ref|YP_005167144.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
ND132]
gi|323458475|gb|EGB14340.1| PP-loop domain protein [Desulfovibrio desulfuricans ND132]
Length = 305
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A + P C +C+ F +++ I ++F +RI + SGGKDS
Sbjct: 3 CTRC-RKTAHVSLPSHHSGFCADCYPLFFTKQVETAIRREKMFTHEDRILVALSGGKDS- 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA +L EL + G D+ L ID GI + + + V+ +GLPL++ +G
Sbjct: 61 -LALML-ELKLQ---GYDVTGLHIDLGIPNSSEKARRKVEDFCTLHGLPLRVFEMA-AWG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ K + + C CG +R +R A D +ATGHN DD + N LR D
Sbjct: 115 LPIPDVKKYVK-RPVCAVCGKMKRHHFNRIAVEEGFDVLATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A LS + +G + + KP E E YA+ K ++ S C Y+ A
Sbjct: 174 TAYLSDQGPVLPASEGFVRKVKPLFRLSEYETA-NYAFLKGIEIHSDPCPYAGGASFTGH 232
Query: 256 REFIKDLERLRPRAILDIIKSG-ENFRISTSTKMPEQGT----CERCGYISSQKWCKAC 309
+E +LE P L ++ +N + + + + E G C CG +S + C C
Sbjct: 233 KELWGELEHRSPGQKLQFYQAFLKNGKPAFARQEKETGAVLAPCTECGSPTSAEICSVC 291
>gi|251770826|gb|EES51414.1| probable ATPase, PP-loop superfamily protein [Leptospirillum
ferrodiazotrophum]
Length = 312
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 19/315 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA ++ P C ECF + + I + AG+ + + SGGKDS
Sbjct: 3 CRAC-KNKAVIRLPSHNSAFCPECFDRFTLSQTKKAIDDYGMITAGDHVLVAVSGGKDSL 61
Query: 76 VLAFVLSELN-RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L +L+ L R + LDL GI Y +S V+ ++GLPL + S +D
Sbjct: 62 ALWDILTRLGYRTTGFHLDL-------GIGEYSAESRGHVEAFASRHGLPLVVESLRDSV 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
++ +I + + C+ CG+ +R ++ A +ATGHN DD A + N+L
Sbjct: 115 NGSVTDIAQAT-RRPACSGCGMSKRYFFNKVALATNATVLATGHNLDDEASRLFGNLLHW 173
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L++ G + KP EKE M YA+ +++ Y EC +S +A +
Sbjct: 174 HDEYLAKNRPDLPAISGLAKKVKPLVRLTEKE-MAAYAFLRKIPYVVKECPHSIDAKQIL 232
Query: 255 AREFIKDLERLRP---RAIL-----DIIKSGENFRISTSTKMPEQGTCERCGYISSQKWC 306
++ + ++E P A L I + + G CE+CG IS C
Sbjct: 233 FKKVLGEIEAASPGTKHAFLFGYLDRISRWYPEAPGEQEEEEAPTGRCEQCGEISWTPVC 292
Query: 307 KACVLLEGLNRGLPK 321
C + E + R L +
Sbjct: 293 SFCRMKEKVARELSR 307
>gi|291287571|ref|YP_003504387.1| PP-loop domain-containing protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884731|gb|ADD68431.1| PP-loop domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 298
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 17/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C++ KA + + C+E F E F +++ + I ++F ++I + SGGKDS
Sbjct: 3 CRKCSE-KALITLRRHNASFCKEHFNEFFIKQVEKGIKEYKMFDFSDKIMVCISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL ++L H G + + I+ GI Y + SL+ V+ ++GL IV+ +L G
Sbjct: 62 VLWYLL------HKMGYETTGMYINLGIGEYSEKSLRKVEAFTEKFGLKAVIVNLTEL-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + K + ++ C+ CG+ +R ++ A D +ATGHN DD + +L N+L+ D
Sbjct: 115 HPIPLLEKSVK-RHACSICGIAKRYYFNKVAYENNFDVVATGHNLDDESARLLGNVLKWD 173
Query: 196 IARLSRCTLITTGEDGPIPR-CKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA---- 250
A LS+ E I R KP E E+ +A+ +DY + EC S A
Sbjct: 174 PAYLSKMDPNLPEEGDYIKRKVKPLIRLTELEVG-AFAFMNGIDYITDECPKSVGATSML 232
Query: 251 YRGFAREFIKDLERLRPRAILDIIKS-GENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
Y+G D+ + + ++ + FR + K E C CG S + C C
Sbjct: 233 YKGVLNSLESDMPGTKHYFYNEFFRTVADRFRADSEEK-TEMYNCAVCGMESFLETCSFC 291
Query: 310 VLLEGL 315
+LE +
Sbjct: 292 KMLEKM 297
>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 303
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C++CF + ++ + I +++F ++I + SGGKDS L +L+ + G ++
Sbjct: 21 FCQDCFLYYYNNQVKKNIKRHKMFDKKDKILVVISGGKDSMALWHILA------SEGYNV 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ I+ GI Y D S Q V+ + GL L + K YG + ++ K++ ++ C+ C
Sbjct: 75 TGMYINLGIGQYSDKSQQVVESFAQKNGLELIVKDIKKEYGLDIYKLSKLLK-RSTCSIC 133
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDGPI 213
G +R ++ A +ATGHN DD A T+L N+L + L+R + ++ + +
Sbjct: 134 GSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLESTHPKLV 193
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP----RA 269
+ KP E+E +F Y ++++ EC ++ A +E + LE P R
Sbjct: 194 KKVKPLYTLTERENLF-YVLINKIEFLHDECPHAIGARSILYKEVLNRLEEESPGTKQRF 252
Query: 270 ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
I ++ G K+ E C CG +++ + C C
Sbjct: 253 ITSFLEKGRRHFQDVQEKL-ELKECSICGQVTTTEVCSFC 291
>gi|333911645|ref|YP_004485378.1| tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
gi|333752234|gb|AEF97313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
Length = 303
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 21/300 (7%)
Query: 16 CSTCN-QRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C + +K PK +C+E F E FE+++ + I ++ +++ I SGGKD
Sbjct: 3 CKICKGEAYIKIKYPKM--ALCKEHFIEYFEKKVQKTIKKYKMIDPEDKVLIAISGGKDG 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
V+ +VL +L G ++ L I+ GI + SL+ VK+ G+ I+ K+L
Sbjct: 61 AVVTYVLKKL------GYNVECLHINLGIGDFSKKSLEYVKKQTSYIGVKCHIIDLKELT 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G ++ E V K C+ CG +R + + A + + TGHN DD A +L N++
Sbjct: 115 GKSIPE---VKSRKPKCSICGTAKRYIVSKFAYDNGFNVMVTGHNLDDEAAFILNNVMNW 171
Query: 195 DIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L+R + + G P + KP E+EI Y+ L+ FS +C ++ A
Sbjct: 172 STEYLARQGPVLP-QKGKFPKKVKPLYELTEEEIS-AYSSAVGLEVFSEKCPFAKKAITL 229
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE RP R ++ +K+ F +P C+ CG SS + C C
Sbjct: 230 EYKEMLNKLEETRPGTKYRFVMGYLKNRHLFEKEIED-IP-LIECKVCGMSSSGEVCSFC 287
>gi|337285882|ref|YP_004625355.1| PP-loop domain-containing protein [Thermodesulfatator indicus DSM
15286]
gi|335358710|gb|AEH44391.1| PP-loop domain protein [Thermodesulfatator indicus DSM 15286]
Length = 302
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 27/308 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C ++KA + P +C E F E FEE + + + ++F +I + SGGKDS
Sbjct: 4 CRKCRRKKADVFIPHHRLPLCEEHFLEWFEEYLARTVKKFKMFSPKAKILVAISGGKDSL 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL L+ L H G L +D GI + S + + + PL +VS G
Sbjct: 64 VLWKALNNLG-YHTEG-----LFVDLGIEDFSLISRRVAENFAEELDRPLHVVSIAKEIG 117
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
T+ ++ K C+ CG +R +R A D + TGHN DD A ++L N +
Sbjct: 118 LTIPDLKS--RTKKYCSLCGSIKRYFFNRFARQNNFDVLVTGHNLDDEASSLLSNTINWQ 175
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ L+R + +G + + KP EI YA ++++Y + C SP A R
Sbjct: 176 LKYLARKYPVLPEGNGFVRKAKPLCRFTAFEIK-EYARLQKIEYLTERCPLSPEATRLVY 234
Query: 256 REFIKDLERLRP----RAILDII--------KSGENFRISTSTKMPEQGTCERCGYISSQ 303
E + +LE P R +D + K E+F T+ CE CG +
Sbjct: 235 AELMDELEEKMPGTKIRFYMDYLRKVYPIFNKQVEDFLDRPLTQ------CEFCGEPAVS 288
Query: 304 KWCKACVL 311
C C L
Sbjct: 289 SPCFVCKL 296
>gi|410667653|ref|YP_006920024.1| 2-thiocytidine tRNA biosysnthesis protein TtcA [Thermacetogenium
phaeum DSM 12270]
gi|409105400|gb|AFV11525.1| putative 2-thiocytidine tRNA biosysnthesis protein TtcA
[Thermacetogenium phaeum DSM 12270]
Length = 322
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 142/318 (44%), Gaps = 31/318 (9%)
Query: 16 CSTCNQR-KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C + + L+ PK C E F E F ++ + + ++ G+++ + SGGKDS
Sbjct: 3 CIKCKKEAEVRLRSPKV--GFCSEHFLEYFLRQVERAVKKFKMLSPGQKVLVAVSGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGY----RDDSLQTVKRNEIQYGLPLKIVSY 130
VL + L G + L ID G+ Y RD LQ + N G L +VS+
Sbjct: 61 IVLWDAILSL------GYEAEGLHIDLGLGEYSEASRDACLQFARNN----GTKLYVVSF 110
Query: 131 KDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
++ EI + L N C+ CGV RR ++ A +ATGHN DD A +L N
Sbjct: 111 PANTRKSIAEIARNARLPN-CSVCGVIRRHLMNILAEATGHRVVATGHNLDDEAAALLGN 169
Query: 191 ILRGDIARLSR--CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
IL L+R L G P R KP E+EI+ +Y + L+Y+ C ++
Sbjct: 170 ILNWQTGYLARQHPHLPAYGRYFPA-RIKPLVRLSEREIL-SYCRLRGLNYYEGRCPFAR 227
Query: 249 NAYRGFAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK 304
A + I++LE P R + +K + TS +M E C C + ++ +
Sbjct: 228 GASSLVYKRIIEELEEEMPGTKHRFLFGFLKEERKRFVITSLEMKE---CRICHHPTTSE 284
Query: 305 WCKACVLLE--GLNRGLP 320
C C L++ G+ LP
Sbjct: 285 VCVFCRLMQKAGIEPNLP 302
>gi|222528237|ref|YP_002572119.1| PP-loop domain-containing protein [Caldicellulosiruptor bescii DSM
6725]
gi|222455084|gb|ACM59346.1| PP-loop domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 301
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 14/288 (4%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C++CF ++ ++ + I +++F ++I + SGGKDS L +L+ + G ++
Sbjct: 21 FCQDCFLYYYKNQVKKNIKRHKMFDKKDKILVVISGGKDSMALWHILA------SEGYNV 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ I+ GI Y D S Q V+ + GL L + K YG + ++ K++ ++ C+ C
Sbjct: 75 TGMYINLGIGHYSDKSQQVVESFAQKNGLELIVKDIKKEYGLDIYKLSKLLK-RSTCSIC 133
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDGPI 213
G +R ++ A +ATGHN DD A T+L N+L + L+R + ++ + +
Sbjct: 134 GSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLESTHPKLV 193
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP----RA 269
+ KP E+E +F Y ++++ EC ++ A +E + LE P R
Sbjct: 194 KKVKPLYTLTERENLF-YVLINKIEFLHDECPHAIGARSILYKEVLNRLEEESPGTKQRF 252
Query: 270 ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNR 317
I ++ G K+ E C CG +++ + C C ++ L +
Sbjct: 253 ITSFLEKGRRHFQDVYEKV-ELKECISCGQVTTTEICSFCRFVQILKQ 299
>gi|303326287|ref|ZP_07356730.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|345891968|ref|ZP_08842794.1| hypothetical protein HMPREF1022_01454 [Desulfovibrio sp.
6_1_46AFAA]
gi|302864203|gb|EFL87134.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|345047747|gb|EGW51608.1| hypothetical protein HMPREF1022_01454 [Desulfovibrio sp.
6_1_46AFAA]
Length = 301
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 131/307 (42%), Gaps = 18/307 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+ C +C+ + F ++ + I G +LF ERI + SGGKDS
Sbjct: 3 CKIC-KAPAAVALKSHNAAFCPDCYKDFFARQVARGIEGQKLFTRDERILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L+ R Y ++ L ID I G + V+R ++GL L + KD+
Sbjct: 62 ALMLELA----RQEY--NVTGLHIDLAIPGSSAAARGVVERFCAKHGLKLLV---KDMAA 112
Query: 136 WTMD-EIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+ VK + C+ CG +R ++ A D +ATGHN DD A + N LR
Sbjct: 113 EGLPIPAVKERLHRPICSACGKIKRHFFNKVALDEGFDALATGHNLDDEAARLFSNTLRW 172
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D A LS + GE G + KP E E YA+ ++ C YSP A
Sbjct: 173 DTAYLSDQGPLLPGEHGFARKVKPLWRLTEFETA-NYAFLMGIENHYAPCPYSPGASFTV 231
Query: 255 AREFIKDLERLRPRAILD-----IIKSGENFRISTSTKMPEQGTCERCGY-ISSQKWCKA 308
+ ++ LE P LD + + F + + E C +CGY SS C
Sbjct: 232 LKGLLQRLETAMPGRKLDFYQGFLARGRPVFARREAEEGVELAPCPQCGYPTSSGDLCGV 291
Query: 309 CVLLEGL 315
C + E L
Sbjct: 292 CRIREAL 298
>gi|383787919|ref|YP_005472487.1| hypothetical protein CSE_02580 [Caldisericum exile AZM16c01]
gi|381363555|dbj|BAL80384.1| hypothetical protein CSE_02580 [Caldisericum exile AZM16c01]
Length = 304
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 34 QICRECFYEVFEEEIHQVI----VGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHN 89
+ C +CF E+E I +G +L E++ + SGGKDS VL ++L R+ N
Sbjct: 19 RFCNDCFKIHVEKEFQSAIEGHAIGTRLINGEEQVMVALSGGKDSMVLWYLL----RKFN 74
Query: 90 YGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN 149
+ + L+++ G+ + + SL+ +++ + G + + + KD +G M E+ +
Sbjct: 75 FNVVPVHLNLNYGV--FSEKSLEVIQKFSEKIGDKVLVYNIKDDFGIDMLEVFNRAKKRP 132
Query: 150 NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSR-CTLITTG 208
C CG+ +R L++ A L+VD IATGHN DD A T IL D LSR ++++
Sbjct: 133 RCGVCGIIKRYLLNKIALNLQVDVIATGHNLDDGAATTFKAILNWDFDTLSRNYPIVSSY 192
Query: 209 EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----SPNAYRGFAREFIKDLE 263
+D + + KP +KEI YA ++Y S C Y + + + E +D +
Sbjct: 193 KDKLVKKIKPLYRLSDKEIKM-YADLVGIEYTSEACPYRIGKVTLSKTKDILDEISEDYK 251
Query: 264 RLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQK--WCKACVLLEGLNRG 318
++ +++ + F+ + E C+ CG ++ + C C L +GL+ G
Sbjct: 252 GIKRTFYYGYLRNKDIFQKDEA----ELKECKICGMPTASEDGVCSFCKLTKGLSDG 304
>gi|409096284|ref|ZP_11216308.1| PP family ATPase [Thermococcus zilligii AN1]
Length = 336
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 14/297 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ R A +K +C E F E FE ++ + I + K +++ + SGGKDS
Sbjct: 36 CKFCD-RPAFIKLHYPKMYLCEEHFKEYFERKVKRTIERYGMLKPDDKVLVVVSGGKDSA 94
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
V A VL + +G ++ L I+ GI Y + S K+ G PL IV ++L G
Sbjct: 95 VTAHVLKK------FGYNIECLHINLGIGEYSETSEIYAKKQCEMIGAPLHIVRVRELLG 148
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + C++CG+ +R ++ A D +ATGHN DD A + NI+ +
Sbjct: 149 HGIGEVRT---RRPTCSYCGLTKRYIFNKFAYDNGFDVVATGHNLDDEASFIFNNIMNWN 205
Query: 196 IARLSRCTLITTGE-DGP-IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
L++ + E +G + + KP E+E++ YA ++Y EC ++ A
Sbjct: 206 TQYLAKQGPVAPSEFNGKLVKKVKPLYEVTEREVV-AYALANGIEYKMEECPHAGGATTL 264
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFR-ISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ + ++E RP ++ +K + + + E C+ CG SS + C C
Sbjct: 265 EWKAILNEMEEKRPGTKINFVKGYLRKKGLFEAELEEEFKECKVCGMPSSGEVCSFC 321
>gi|312623404|ref|YP_004025017.1| PP-loop domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203871|gb|ADQ47198.1| PP-loop domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 301
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 17/304 (5%)
Query: 16 CSTC-NQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C N+ LKR C++CF ++ ++ + I +++F ++I + SGGKDS
Sbjct: 3 CVRCKNKGVIYLKRHNA--AFCQDCFLYYYKNQVKRNIKRHKMFDKKDKILVVISGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VLS + G + + I+ GI Y D S Q V+ + GL L + K Y
Sbjct: 61 MALWHVLS------SEGYNATGMYINLGIGEYSDKSQQVVENFAQKNGLELIVKDIKKEY 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + ++ K++ ++ C+ CG +R ++ A +ATGHN DD A T+L N+L
Sbjct: 115 GLDIYKLSKLLK-RSTCSICGSIKRYLFNKVAYDGGFFAVATGHNLDDEAATLLGNVLSW 173
Query: 195 DIARLSRCT-LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ L+R + ++ + + + KP E+E +F Y ++++ EC ++ A
Sbjct: 174 EEGYLARQSPVLESTHPKLVKKAKPLYTLTERENLF-YVLINKIEFLHDECPHAIGAMSI 232
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P R I ++ G K+ E C CG +++ + C C
Sbjct: 233 LYKEVLNRLEEESPGTKQRFITSFLEKGRRHFQDIYEKV-ELKECISCGQVTTTEICSFC 291
Query: 310 VLLE 313
++
Sbjct: 292 RFVQ 295
>gi|225848863|ref|YP_002729027.1| PP-loop domain protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644597|gb|ACN99647.1| PP-loop domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 303
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 27/306 (8%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C+Q KA + P+ +C++ + + F+ + + I ++FK ++I + SGGKD
Sbjct: 2 RKCFKCSQ-KAQVYLPQHRLSLCKDHYLQWFDNRVEKTIKEFKMFKKEDKILVAVSGGKD 60
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L L+ L Y D F +++ GI Y + S + + G PL +S K
Sbjct: 61 SLSLWKALTNLG----YQADGFYINL--GIGEYSEKSEKLATAFSEKIGRPLYKISLKQ- 113
Query: 134 YGWTMDEIVKVIGLKNN-----CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
EI+ + +K + C+ CG +R +++ A IATGHN DD A +
Sbjct: 114 ------EIMPIPEIKKHDSRPTCSVCGTVKRYYMNKFAKDNGYKIIATGHNLDDEAAVLF 167
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
N L + L R + EDG I + KP EKE YA ++Y EC +S
Sbjct: 168 SNTLNWSVEYLKRQYPVLPEEDGFIRKVKPLCKISEKESAM-YAILSGIEYIEEECPFSE 226
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFR-----ISTSTKMPEQGTCERCGYISSQ 303
A + F+ LE P L E R + S + P+ C+ CG S
Sbjct: 227 GATSIDYKIFLSQLEEKSPGTKLRFY--SEFLRKMYPILQKSEEKPQLRPCKICGEPSIN 284
Query: 304 KWCKAC 309
+ C C
Sbjct: 285 EICSVC 290
>gi|386394012|ref|ZP_10078793.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
gi|385734890|gb|EIG55088.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
Length = 312
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 122/301 (40%), Gaps = 19/301 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A +K P C +CF F +++ I + + K GE++ + SGGKDS
Sbjct: 3 CKRCGEL-AVVKLPSHHTGFCPDCFEMFFRKQVETAIRRHAMIKPGEKVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLS+L G D+ L + GI D + + G L ++ ++ G
Sbjct: 62 ALMRVLSDL------GHDVDGLHVHLGIPDSSDPVCERTESYCRDNGFRLHVLRTAEV-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C CG +R +R A +ATGHN DD + N+LR D
Sbjct: 115 LAIPKVKDAV-RRPICAVCGKIKRHYFNRFAYENGYSALATGHNLDDEVARLFANVLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L E + + KP E E Y + K +D++ C YS A
Sbjct: 174 ATYLGSQGPTLPAEGKFVRKIKPLYRVTEFETA-AYCFLKGIDHWKAACPYSGGASFTGH 232
Query: 256 REFIKDLERLRP-------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
++ DLE P A L+ K F ++ M C CGY SS + C
Sbjct: 233 KKLFADLEDRSPGQKTAFYEAFLE--KGRPQFTGTSRNGMDTLYACSECGYPSSGEVCGV 290
Query: 309 C 309
C
Sbjct: 291 C 291
>gi|347733393|ref|ZP_08866453.1| PP-loop family protein [Desulfovibrio sp. A2]
gi|347517849|gb|EGY25034.1| PP-loop family protein [Desulfovibrio sp. A2]
Length = 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 131/305 (42%), Gaps = 15/305 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A + P C ECF F ++ + I +LF +RI + SGGKDS
Sbjct: 3 CKRCKE-TAVVALPSHHTGFCAECFLLFFTRQVERGIKERKLFTHDDRILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + EL+R+ G D+ L ID I G + V+R ++GL L IV G
Sbjct: 62 GL---MLELSRQ---GYDVTGLHIDLAIPGSSPVARGVVERFCEKHGLNL-IVKEMGAEG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C+ CG +R ++ A +ATGHN DD + N LR D
Sbjct: 115 LAIPDVKARLN-RPVCSACGKIKRYFFNKTALDENFTVLATGHNLDDEIARLFSNTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+A LS + G + KP E E YA+ +++ C YS A F
Sbjct: 174 VAYLSDQGPDLAADGGFARKVKPLWRLSEFETA-NYAFLMGIEHHYAPCPYSGGASFTFY 232
Query: 256 REFIKDLERLRPRAILDIIKSG-ENFRISTSTKMPEQGT----CERCGYISSQKWCKACV 310
++ DLE P LD + E R + E G C RCGY +S + C C
Sbjct: 233 KKLWTDLEEEMPGRKLDFYQGFLERGRPVFARADNEDGVDLTGCTRCGYPTSNEVCGVCR 292
Query: 311 LLEGL 315
+ + L
Sbjct: 293 IRDAL 297
>gi|146295177|ref|YP_001178948.1| PP-loop domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408753|gb|ABP65757.1| PP-loop domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 303
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 17/308 (5%)
Query: 16 CSTCNQR-KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDS 74
C C Q+ K LKR C ECF + ++ + I ++F ++I SGGKDS
Sbjct: 3 CVRCKQKAKILLKRHNA--AFCNECFLYYYRNQVTKNIRKYKMFDKKDKILAVISGGKDS 60
Query: 75 TVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY 134
L VL + G ++ + I+ GI Y + S + V+ + LPL + K +
Sbjct: 61 MALWDVLVK------EGYNVVAMYINLGIGEYSNRSQKVVESFASKNNLPLIVKDIKKEF 114
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G + ++ K + ++ C+ CG +R ++ A +ATGHN DD A T+L N+L
Sbjct: 115 GLDIYKLSKTLK-RSPCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSW 173
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ L+R ++ I + KP E+E ++ Y ++++ EC +S A
Sbjct: 174 EEGYLARQAPVLPQTHPKLIKKVKPLYSLTERENLY-YVLLNKIEFLHEECPHSVGARSI 232
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+E + LE P R + ++ G S K+ E C+ CG +++ + C C
Sbjct: 233 LFKEVLNKLEEESPGTKQRFLNGFLEKGRRHFQDVSEKL-ELRECKTCGQVTTTEECSFC 291
Query: 310 VLLEGLNR 317
++ N
Sbjct: 292 RFVKICNH 299
>gi|119720174|ref|YP_920669.1| PP-loop domain-containing protein [Thermofilum pendens Hrk 5]
gi|119525294|gb|ABL78666.1| PP-loop domain protein [Thermofilum pendens Hrk 5]
Length = 323
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 8/307 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C + A + + +C F E ++ + +L + G R+ SGG DS
Sbjct: 5 CSVCGE-PAVARVEYARKWLCGAHFAGYVEGKVLGALERYRLVERGWRVLAAVSGGADSA 63
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ VL++ + G L + +D GI G+ + S + V+ G+P +VS ++ G
Sbjct: 64 AMLGVLAKAS--VALGFRLAAVHVDLGIEGFSEASRRAVEELCGSLGVPFAVVSLPEVAG 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + + C+ CG +R ++ A+ D +A GH+ADD+ + N L
Sbjct: 122 VGLPELARR-ARRPVCSVCGAVKRYLVNVAAAEAGADVVALGHHADDLLAYAVKNFLFQR 180
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN-AYRGF 254
+ L++ T G + R +P Y+ E YA L + C YSPN + G
Sbjct: 181 LPELAKLGPKTESTGGLVGRVRPLYEVYKSEASL-YARLSGLPFTEERCPYSPNRSVEGE 239
Query: 255 AREFIKDLERLRPRAILDIIKS-GENFRISTSTKMPEQGTCERCGYISSQKWCKACVL-L 312
R F+ +E RP + + + N + C CG S + C C L L
Sbjct: 240 VRAFLDSVEARRPGFKISLARGLARNAGLWGQGPRSPPRACRVCGAPSEGELCSFCRLTL 299
Query: 313 EGLNRGL 319
+ L R +
Sbjct: 300 KALGRPM 306
>gi|357635500|ref|ZP_09133378.1| PP-loop domain protein [Desulfovibrio sp. FW1012B]
gi|357584054|gb|EHJ49387.1| PP-loop domain protein [Desulfovibrio sp. FW1012B]
Length = 302
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 123/301 (40%), Gaps = 19/301 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+K P C +CF F +++ I + + + GE++ + SGGKDS
Sbjct: 3 CKRCGEL-AAVKLPSHHTGFCPDCFELFFRKQVETAIRRHAMIQPGEKVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VLS+L G D+ L + GI D + + G L ++ ++ G
Sbjct: 62 ALMRVLSDL------GHDVDGLHVHLGIPDSSDPVCERTESYCRDNGFRLHVLRTAEV-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C CG +R +R A +ATGHN DD + N+LR D
Sbjct: 115 LAIPKVKDAV-RRPICAVCGKIKRHYFNRFAYENGYAALATGHNLDDEVARLFANVLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L E + + KP E E Y + K +D++ C YS A
Sbjct: 174 ATYLGSQGPTLPAEGRFVRKIKPLYRVTEFETA-AYCFLKGIDHWKAACPYSGGASFTGH 232
Query: 256 REFIKDLERLRP-------RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
++ DLE P A L+ K F ++ M C CGY SS + C
Sbjct: 233 KKLFADLEDRSPGQKTAFYEAFLE--KGRPQFTGTSRNGMDTLYACSECGYPSSGEVCGV 290
Query: 309 C 309
C
Sbjct: 291 C 291
>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
Length = 303
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
C++CF + ++ + I +++F ++I + SGGKDS L +L++ G ++
Sbjct: 21 FCQDCFLYYYNNQVKKNIKKHRMFDKKDKILVVISGGKDSMALWHILAK------EGYNV 74
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
+ I+ GI Y D S Q V+ + GL L + K YG + ++ K++ ++ C+ C
Sbjct: 75 TGMYINLGIGQYSDKSQQVVESFAQKNGLELIVKDIKKEYGLDIYKLSKLLK-RSTCSVC 133
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDGPI 213
G +R ++ A +ATGHN DD A T+L N+L + L+R + ++ + +
Sbjct: 134 GSIKRYLFNKIAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLESIHPKLV 193
Query: 214 PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP----RA 269
+ KP E+E +F Y ++++ EC ++ A ++ + LE P R
Sbjct: 194 KKVKPLYTLTERENLF-YVLINKIEFLHDECPHAVGARSIMYKDVLNRLEEESPGTKQRF 252
Query: 270 ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
I ++ G K+ E C CG +++ C C
Sbjct: 253 ITSFLEKGRKHFQDVYEKV-ELKECSICGQVTTTDVCSFC 291
>gi|163785862|ref|ZP_02180328.1| hypothetical protein HG1285_18986 [Hydrogenivirga sp. 128-5-R1-1]
gi|159878868|gb|EDP72906.1| hypothetical protein HG1285_18986 [Hydrogenivirga sp. 128-5-R1-1]
Length = 229
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 25/242 (10%)
Query: 8 SKKAGGRLCSTCNQR----KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
+K G C+ C + KA + P +C++ F E FE+ + + I ++F +R
Sbjct: 2 AKLKKGSRCTVCKAKGEKEKAVVFLPHHRLALCKKHFIEWFEKRVAKTIKEFRMFSPKDR 61
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYG- 122
I I SGGKDS L L +L Y D F ID GI Y DS KR +Q+
Sbjct: 62 ILIAVSGGKDSLALWNALVKLG----YEADGFY--IDLGIDEYSQDS----KRLALQFAE 111
Query: 123 ---LPLKIVSYKDLYGWTMDEIVKVIGLKNN--CTFCGVFRRQALDRGASLLKVDKIATG 177
PL IVS K+ + I ++ + N C+ CG +R +++ A L + IATG
Sbjct: 112 KIERPLHIVSLKE----EIAPIPQIDQITNRPACSACGTVKRYYMNKYAKELGYNIIATG 167
Query: 178 HNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRL 237
HN DD + N L DI L R + E+G I + KP EKE YA+F +
Sbjct: 168 HNLDDEVAVLFGNTLHWDIDYLKRQYPVLREENGFIRKVKPLCKITEKEAAL-YAFFNNI 226
Query: 238 DY 239
+Y
Sbjct: 227 EY 228
>gi|374301694|ref|YP_005053333.1| PP-loop domain-containing protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554630|gb|EGJ51674.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 311
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 127/300 (42%), Gaps = 15/300 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C Q +A + P CRECF+ F +I + I + +F ++I + SGGKDS
Sbjct: 3 CRRCRQ-EAEVALPSHTTGFCRECFFLYFRRQIERAIKKHGMFGPQDKILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + L+ + G D+ L + GI + + V+ ++G L I G
Sbjct: 62 ALMYELA------DQGYDVTGLHVYLGIGRSSEQARHLVESFCAKHGFKLMIADMP-AEG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ + I + C+ CG +R +R A +ATGHN DD + N LR D
Sbjct: 115 LAIPEVKECIS-RPICSVCGKIKRHYFNRIALEHGFTALATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A LS + + G + KP E E Y++ + +DY C YS A
Sbjct: 174 AAYLSDQGPTLSEDSGFARKVKPLYRLTEFETA-AYSFLRGIDYGVDPCPYSSGASFTSH 232
Query: 256 REFIKDLERLRPRAILD----IIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+ + LE P + + +KSG + F+ E C CG +S + C C+
Sbjct: 233 KALWETLEEKSPGSKIHFYDGFLKSGRKAFQSLERESGVELSPCGECGSPTSGEICGVCL 292
>gi|242278578|ref|YP_002990707.1| PP-loop domain-containing protein [Desulfovibrio salexigens DSM
2638]
gi|242121472|gb|ACS79168.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
Length = 310
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 127/304 (41%), Gaps = 24/304 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P C+E F F ++ Q I L + +++ + SGGKDS
Sbjct: 3 CKVCKE-KAVVSLPSHNAAFCKEHFNNFFMRQVAQGIKNRNLLEPDDKVLVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + LSEL G D+ L ID GI + V+ G PL++V + G
Sbjct: 62 GLMYALSEL------GYDVTGLHIDLGIYESSIKARAVVEGFCKDKGYPLRVVELEK-EG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
M I K I + C CG F+R ++ A +ATGHN DD + N LR D
Sbjct: 115 VPMPLIKKHI-RRPICAICGKFKRHYFNKVAIEEGYTALATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKP-FKYT-YEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
LS + E+G + KP F+ T YE I +++ + Y C +S A
Sbjct: 174 QGYLSDQGPVLPAENGFAKKVKPLFRVTEYESAI---FSFLADIPYHHLPCPFSSGASFT 230
Query: 254 FAREFIKDLERLRP-------RAILDIIKSGENF-RISTSTKMPEQGTCERCGYISSQKW 305
++ +D+E P + LD + F + K E C CGY +S
Sbjct: 231 GHKKLWRDMELRSPGTKRAFYKGFLD--RGQPAFAALEKEEKDYEINPCTECGYPTSAGV 288
Query: 306 CKAC 309
C C
Sbjct: 289 CSIC 292
>gi|380802961|gb|AFE73356.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Macaca mulatta]
Length = 93
Score = 94.0 bits (232), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C++C+ +AAL+RP++ + +C CF FE E+ ++ +L G +A+GASGGKDST
Sbjct: 1 CASCHASRAALRRPRSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRD 108
VLA VL L R G+ L L+++DEGI GYRD
Sbjct: 61 VLAHVLRALTPR--LGISLQLVAVDEGIGGYRD 91
>gi|317154147|ref|YP_004122195.1| PP-loop domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944398|gb|ADU63449.1| PP-loop domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 309
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 15/303 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C ++ A + P C EC+ F ++ I ++F ERI + SGGKDS
Sbjct: 3 CSRC-KKLACVTLPSHHSGFCAECYPLFFTRQVETAIRREKMFTHEERILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L L+ G D+ L ID GI G + V+ +GL L+++ + G
Sbjct: 62 SLMLELA------AQGYDVTGLHIDLGIPGSSPSARVKVEAFCSSHGLKLEVLEMEK-EG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ +I + + C+ CG +R +R A D +ATGHN DD + N LR D
Sbjct: 115 LPIPDIKAYVN-RPVCSVCGRIKRHHFNRIAMEGGYDALATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A LS +G + + KP E E YA+ K ++ S C Y+ A
Sbjct: 174 TAYLSDQGPTLPAREGFVRKVKPLFRLSEFETA-NYAFLKGIEIHSAACPYASGASFTSH 232
Query: 256 REFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQ-GTCERCGYISSQKWCKACV 310
+E +LE P + +K G+ + ++ E C C +S C C
Sbjct: 233 KELWGELEHRSPGQKFQFYQGFLKKGKPAFAAREAEVGEPLAPCVECASPTSAGTCSVCR 292
Query: 311 LLE 313
+ E
Sbjct: 293 IKE 295
>gi|302038685|ref|YP_003799007.1| putative P-loop ATPase [Candidatus Nitrospira defluvii]
gi|300606749|emb|CBK43082.1| putative PP-loop ATPase, YdaO type [Candidatus Nitrospira defluvii]
Length = 305
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 131/313 (41%), Gaps = 23/313 (7%)
Query: 23 KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLS 82
+A + P+ C+ CF E++ + I ++F +RI + SGGKDS L +L
Sbjct: 2 RAVISLPRHNAAFCKGCFTTFVHEQVARAIKSFKMFTPEDRILVAVSGGKDSLALWHILL 61
Query: 83 ELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRN----EIQYGLPLKIVSYKDLYGWTM 138
L R + L ++ GI GY ++S + V+ +G L + + G +
Sbjct: 62 ALGYRAD------ALYVNLGIGGYSEESHRKVRHYADTVAAAHGAKLIVHVVEQEAGAGI 115
Query: 139 DEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIAR 198
E+ ++ + C+ CG +R +R A D +ATGHN DD A +L N+L
Sbjct: 116 RELATILH-RPTCSTCGTIKRYQFNRAAVEQDYDVMATGHNLDDEAARLLGNVLHWQDEY 174
Query: 199 LSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFARE 257
L + + +G + KP E+EI YA R+DY EC + + +E
Sbjct: 175 LDKQSPTLPASVEGFAKKVKPLCRLSEREIA-AYAVVNRIDYIVEECPMAKGSKMILYKE 233
Query: 258 FIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQ-----GTCERCGYISSQKWCKA 308
+ LE P R ++ +T + M E+ C+ CG ++ C
Sbjct: 234 VLNRLETESPGTKQRFYWGFLEKQTKPEPATES-MAEKDQRTLHPCQSCGQPTTADTCSY 292
Query: 309 CVLLEGLNRGLPK 321
C ++ P+
Sbjct: 293 CKMMAKAKTATPR 305
>gi|256829264|ref|YP_003157992.1| PP-loop domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578440|gb|ACU89576.1| PP-loop domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 312
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 127/306 (41%), Gaps = 16/306 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C Q A + P C++CF + + I + +F +RI I SGGKDS
Sbjct: 3 CKRC-QIPAVVALPSHHTAFCKDCFLVFARRLVERAIKEHGMFTFDDRILIAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA+ L +L G ++ L ID GI + +R +PL ++ L G
Sbjct: 62 ALAWQLKDL------GYNIEGLHIDLGIPESSPIARSYAERFCAMGEIPLHVIETAKL-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
M ++ + + + C+ CG +R ++ A +ATGHN DD + N++R D
Sbjct: 115 LAMCDVKRRVK-RPICSVCGQTKRYLFNKFAQENGFTVLATGHNLDDETSRLFANVMRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ LS + E G + KP E E + +DY C YS A
Sbjct: 174 VEFLSDQGPVMPAEKGFAKKVKPLFRLTEFETA-NLCFLAGIDYGYAPCPYSSKASFPIY 232
Query: 256 REFIKDLERLRP----RAILDIIKSG-ENFRISTSTKMPEQGTCERCGYISSQKWCKACV 310
+ + DLE ++P R +K G + F T + Q C CGY +S C C
Sbjct: 233 KNLLADLEDIQPGRKIRFYDGFLKDGRQGFAPRGETSVDIQ-PCTTCGYPTSAGECGFCR 291
Query: 311 LLEGLN 316
L +N
Sbjct: 292 LTATMN 297
>gi|41615074|ref|NP_963572.1| hypothetical protein NEQ283 [Nanoarchaeum equitans Kin4-M]
gi|40068798|gb|AAR39133.1| NEQ283 [Nanoarchaeum equitans Kin4-M]
Length = 268
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 122/269 (45%), Gaps = 28/269 (10%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
LF E++ + SGGKDS L +L L NY DL+ ID GI G+ D S + V+
Sbjct: 18 SLFSPNEKLLLAISGGKDSVTLLDILYNL----NYKFDLYF--IDLGIKGFSDISEKIVE 71
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+YGL L I D YG T +K IG C CG+ +R +++ A K +
Sbjct: 72 SLSKEYGLNLYIDRVAD-YGIT----IKPIGKMPACAVCGIVKRYLMNKFA-YEKDYTLI 125
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
T HN DDI L N+ G+ L + + KP + EKE + Y K
Sbjct: 126 TAHNFDDIIAFALANLFSGNYEYLLKIRPKNERYYKLAKKVKPLFFVREKETL-QYVKEK 184
Query: 236 RLDYFSTECIY----SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPE- 290
L Y + EC + + Y+ A EF E++ P + IK+ + +T++PE
Sbjct: 185 NLPYVNIECPLRRKNTQDRYKNIANEF----EKIFPGFKKNFIKA----LLYYNTRVPEP 236
Query: 291 --QGTCERCGYISSQKWCKACVLLEGLNR 317
+ C+ CGY S + C C + L+R
Sbjct: 237 KPKNYCKICGYPSKGEVCSFCRIRNALSR 265
>gi|293115558|ref|ZP_05792063.2| PP-loop family protein [Butyrivibrio crossotus DSM 2876]
gi|292809265|gb|EFF68470.1| PP-loop family protein [Butyrivibrio crossotus DSM 2876]
Length = 390
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
Query: 5 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI 64
++ S K G T + R+ + K +E R+ F++ + I +L K G+++
Sbjct: 91 DAVSLKGGYAAWLTSSYREDYEDKQKEVETSIRKTFHKCIFSPFAKAINEYELLKPGDKV 150
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
A+ SGGKDS ++A + E+ R + + +L L +D GY + + +++N G+P
Sbjct: 151 AVCISGGKDSMLMAKLFQEIKRHNKFDFELVFLVMD---PGYSEVNRLVIEKNARMLGVP 207
Query: 125 LKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIA 184
+ I + D + V ++ C C RR L A L +KIA GH+ DD+
Sbjct: 208 ITIFETQ-----IFDAVYDV--KQSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVI 260
Query: 185 ETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC 244
ET+L+ +L G + L +T +G + +P Y E +IM + F L + C
Sbjct: 261 ETILMGMLYGAQVQTMMPKLHSTNFEG-MELIRPMYYIREDDIMH-WRDFNNLHFIQCAC 318
Query: 245 IYSPN-----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
++ + R ++ IKD++++ P +I KS N + T
Sbjct: 319 HFTDTCSSCREDGTTASKRMEIKQLIKDMKKVNPYVEGNIFKSVYNVSLGT 369
>gi|239907698|ref|YP_002954439.1| hypothetical protein DMR_30620 [Desulfovibrio magneticus RS-1]
gi|239797564|dbj|BAH76553.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 308
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 16/304 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+K P C CF F++++ + + + E++ + SGGKDS
Sbjct: 3 CKRCGEL-AAVKLPSHHAGFCPSCFEGFFKKQVETAVRRHGMIGRDEKVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL++L G + L + GI D + + GL L ++ + +G
Sbjct: 62 ALMRVLTDL------GHVVEGLHVHLGIPDSSDPVAERTRAFCAASGLTLHVLHTAE-HG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C CG +R +R A +ATGHN DD + N+LR D
Sbjct: 115 LAVPDVKDAV-RRPVCAVCGKIKRHYFNRFAYENGFAALATGHNLDDETARLFANVLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A L GE + + KP E E Y + K +D++ C YS A
Sbjct: 174 PAYLGTQGPTLPGEGKFVRKIKPLYRLTEFETA-AYCFLKGIDHWKAACPYSGGASFTGH 232
Query: 256 REFIKDLERLRPR---AILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKAC 309
++ I DLE P A + + + +++ Q T C +CG+ SS + C C
Sbjct: 233 KKLIADLEDRSPGQKIAFYEAFLAQGRPHFAGASRGEGQDTLYACAQCGFPSSGEVCGVC 292
Query: 310 VLLE 313
+ E
Sbjct: 293 RVRE 296
>gi|302870896|ref|YP_003839532.1| PP-loop domain-containing protein [Caldicellulosiruptor obsidiansis
OB47]
gi|302573755|gb|ADL41546.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 303
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 18/282 (6%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLS--ELNRRHNYGL 92
C++CF ++ ++ + I +++F ++I + SGGKDS L +L+ E N Y
Sbjct: 21 FCQDCFLYYYKNQVKKNIKRHKMFDKKDKILVVISGGKDSMALWHILASEEYNVTGMY-- 78
Query: 93 DLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 152
I+ GI Y D S Q V+ + L + I K YG + ++ K++ ++ C+
Sbjct: 79 ------INLGIGEYSDKSQQVVESFAQKNNLEVIIKDIKKEYGLDIYKLSKLLK-RSTCS 131
Query: 153 FCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCT-LITTGEDG 211
CG +R ++ A +ATGHN DD A T+L N+L + L+R + ++ +
Sbjct: 132 VCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLDSTHPK 191
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP---- 267
+ + KP E+E +F Y ++++ EC ++ A +E + LE P
Sbjct: 192 LVKKVKPLYTLTERENLF-YVLINKIEFLHDECPHAVGARSIMYKEVLNRLEEESPGTKQ 250
Query: 268 RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
R I ++ G K+ E C CG +++ C C
Sbjct: 251 RFITSFLEKGRKHFQDVYEKV-ELKECSICGQVTTTDVCSFC 291
>gi|410465019|ref|ZP_11318393.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409981866|gb|EKO38381.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 308
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 16/304 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + AA+K P C CF F++++ + + + E++ + SGGKDS
Sbjct: 3 CKRCGEL-AAVKLPSHHAGFCPTCFEGFFKKQVETAVRRHGMIGRDEKVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L VL++L G + L + GI D + + GL L ++ + +G
Sbjct: 62 ALMRVLTDL------GHVVEGLHVHLGIPDSSDPVAERTRAFCAANGLTLHVLHTAE-HG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ ++ + + C CG +R +R A +ATGHN DD + N+LR D
Sbjct: 115 LAVPDVKDAV-RRPVCAVCGKIKRHYFNRFAYENGFAALATGHNLDDETARLFANVLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A L GE + + KP E E Y + K +D++ C YS A
Sbjct: 174 PAYLGTQGPTLPGEGKFVRKIKPLYRLTEFETA-AYCFLKGIDHWKAACPYSGGASFTGH 232
Query: 256 REFIKDLERLRP---RAILDIIKSGENFRISTSTKMPEQGT---CERCGYISSQKWCKAC 309
++ I DLE P A + + + +++ Q T C +CG+ SS + C C
Sbjct: 233 KKLIADLEDRSPGQKTAFYEAFLAQGRPHFAGASRGEGQDTLYACAQCGFPSSGEVCGVC 292
Query: 310 VLLE 313
+ E
Sbjct: 293 RVRE 296
>gi|395529304|ref|XP_003766756.1| PREDICTED: transmembrane protease serine 9-like [Sarcophilus
harrisii]
Length = 748
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
LDYFS EC+Y+P A+RG R+ +K LE RP +LD++ S E ++ + + P G
Sbjct: 63 LPELDYFSEECVYAPEAFRGHVRDLLKALEAARPSVVLDLVHSAERLALAPAARPPPPGA 122
Query: 294 CERCGYISSQKWCKACVLLEGLNRGLPKMGIVRS 327
C RCG ++S+ C+AC LL+GLNRG P++ I ++
Sbjct: 123 CIRCGALASRSLCQACALLDGLNRGRPRLAIAKN 156
>gi|156937500|ref|YP_001435296.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566484|gb|ABU81889.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
Length = 383
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 24/296 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C+ R+A + ++C+ E + + +V + +R+ +G SGGKDS
Sbjct: 9 CSFCD-REAIITIKYARLRLCKRHLEEFLIKRLKKV-------ELPKRVLLGLSGGKDSV 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L ++L ++ G ++ ++D + Y + KR + G+ V K+LYG
Sbjct: 61 ALLYLLKKV------GTEVVAATVDT-VPNYTSLEAELAKRVAEELGVTHYTVYAKELYG 113
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T K+ + C+ C RR AL+ A L ++ IATGHN DD+A L ILRGD
Sbjct: 114 FTALSYKKL--RRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMASWALSYILRGD 171
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTEC-IYSP-NAYRG 253
L + + + R KP + EKEIM T+ K+L + C +Y P + +
Sbjct: 172 FQSLKKVRPVERPKGPARGRVKPLFWIGEKEIM-TFLLSKKLPWLKASCPLYEPRSTFVD 230
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKAC 309
+ +E I LE ++++ N+ + +G C Y W + C
Sbjct: 231 YVKETILKLEERYGNVRINLL----NYVVRREGGNEGEGEPNACKYCGGPAWGEVC 282
>gi|154249688|ref|YP_001410513.1| PP-loop domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153624|gb|ABS60856.1| PP-loop domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 323
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 139/302 (46%), Gaps = 15/302 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ + R + C+E F E FE+ + + I ++F+ +++ + S GKDS+
Sbjct: 3 CKKCSNQAVIHLRAHNV-AFCKEHFIEFFEKRVQKAINDFKMFQKEDKVLVAVSSGKDSS 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV-SYKDLY 134
+ + L +L Y ++ L + + + + + VK + G+P+ I + + +
Sbjct: 62 AVLYALKKL----GYNVEGLFLKMGR----HTNAAERVVKSLQESIGVPINIYDTTQHFH 113
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G EI ++ + C+ CG+ RR ++R A + TGHN DD A + NIL
Sbjct: 114 GLGTSEIASIVR-RPVCSICGIVRRYWMNRFAVENGFSVLVTGHNLDDEATFLFGNILNW 172
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
+ +R ++ + + + KP Y E+E + Y + + + +C ++ A
Sbjct: 173 QVEYFARQWPVLEKTHEKFVRKAKPLIYVTERE-TYAYVFLNNIPFMEQKCPFAKGATSS 231
Query: 254 FAREFIKDLERLRPRAILDII-KSGENFR-ISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++++ +E +P A ++ +N R I + E C CG+ ++++ C+ C L
Sbjct: 232 NYKKYLNLIESEQPGAKHRLLFGYFDNLRDIVYKEQKIELKECSVCGFPTTEEKCQYCRL 291
Query: 312 LE 313
E
Sbjct: 292 EE 293
>gi|420156879|ref|ZP_14663719.1| PP-loop family protein [Clostridium sp. MSTE9]
gi|394756889|gb|EJF39948.1| PP-loop family protein [Clostridium sp. MSTE9]
Length = 291
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 44 FEEEIHQVIVGN----QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
+++EI ++G QL G+RIA+ SGGKDS +LA L L R +L LS+
Sbjct: 15 YKKEIWNRMIGGIKDYQLILPGDRIAVCISGGKDSMLLAKCLQMLQRHTEIPFELEFLSM 74
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
D GY + + Q + +N + G+PL + S + + EIV G N C C RR
Sbjct: 75 D---PGYNEYNRQLIAQNAEKLGIPLTVFSSR------IFEIVSHSG-GNPCYLCARMRR 124
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +KIA H+ DD+ ET ++++L G R L +T G + +P
Sbjct: 125 GHLYAKAKELGCNKIALAHHFDDVIETTMMSMLYGAEIRTMMPKLPSTNFPG-MEIIRPL 183
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSPNA-----------YRGFAREFIKDLERLRPR 268
E++++ + + L++ C S NA R +E I L + P+
Sbjct: 184 YLVRERDVL-AWKRYNSLEFVRCGCPLSENAPVCTEKENNGSKRAMVKELIARLRKDNPQ 242
Query: 269 AILDIIKSGENFRIST 284
++I +S N + T
Sbjct: 243 VDINIFRSMHNVNLDT 258
>gi|442323524|ref|YP_007363545.1| hypothetical protein MYSTI_06588 [Myxococcus stipitatus DSM 14675]
gi|441491166|gb|AGC47861.1| hypothetical protein MYSTI_06588 [Myxococcus stipitatus DSM 14675]
Length = 281
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I ++L +AG+RI +G SGGKDS + ++L EL RR DL +++D+G G+
Sbjct: 17 RAIADHRLIEAGDRIMVGVSGGKDSYTMLYLLRELQRRAPVKFDLLAVNLDQGHPGFPGH 76
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L+ + E G P K++ +D Y ++ K K C+ C RR L A L
Sbjct: 77 VLEEYFQRE---GYPYKLLK-EDTYSIVLE---KTPPGKTQCSVCSRMRRGILYTAAVEL 129
Query: 170 KVDKIATGHNADDIAETVLLNI-LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM 228
+KIA GH+ DD+ T+LLN+ G I + + +DG +P Y EK+I
Sbjct: 130 GCNKIALGHHRDDLIHTLLLNLFFAGSIKAMPP---LLKSDDGRNVVIRPLCYAPEKDI- 185
Query: 229 FTYAYFKRLDYFST----ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
A F L F C N R + ++DL + P ++ + N R S
Sbjct: 186 ---AKFAELKAFPIIPCDLCGTQENLQRKRMQRLVEDLGKEIPNVRQSVLNAMANVRPS 241
>gi|407984741|ref|ZP_11165349.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
gi|407373576|gb|EKF22584.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
Length = 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 15/301 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + +AA++ C CF + +++ I +++ GER+ + SGGKDS
Sbjct: 3 CDRCEE-QAAIEVRHERAAFCPACFVQRCRDQVRAAIDQHRMIHPGERVLVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ +L +L Y D L + GI GY D S + + G+ L V G
Sbjct: 62 AVWDLLLDL----GYEADGVYLGL--GIGGYSDRSGDCARAFAERRGVRLIEVDIAAEAG 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+T+ + + + C+ CG+ +R L++ D + TGHN DD A + N ++ +
Sbjct: 116 FTIPQASRT--KRTPCSACGLTKRHLLNKVTLEHGYDVLVTGHNLDDEAAVLFGNTMQWN 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+ L+R G R KP E+E Y +R+DY EC +
Sbjct: 174 MPYLARQRPALPESPGFARRVKPLVRLTERETA-AYCVIRRIDYILEECPMAAGNRHLMY 232
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQ-----GTCERCGYISSQKWCKACV 310
+E + LE P + + + + E+ GTC RCG ++ + C C
Sbjct: 233 KELLNSLEERAPGSKATFLNGFFERQAPLLADLAEEERGTVGTCSRCGSPTTAEVCAFCR 292
Query: 311 L 311
L
Sbjct: 293 L 293
>gi|338730598|ref|YP_004659990.1| PP-loop domain-containing protein [Thermotoga thermarum DSM 5069]
gi|335364949|gb|AEH50894.1| PP-loop domain protein [Thermotoga thermarum DSM 5069]
Length = 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 124/292 (42%), Gaps = 25/292 (8%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C E F E FE+ + I +F ++I + SGGKDST + FVL++L + + G+++
Sbjct: 22 CAEHFKEYFEKRVEMTIKKYSMFSRKDKILVAVSGGKDSTTVWFVLAKLGYKVS-GMNID 80
Query: 96 LLSIDEGISGYRD------DSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKN 149
+ ++ ++ +D L TV E+ L G T+ E K++ +
Sbjct: 81 VGTVPADVNKLKDFASSIGSELITVDSREL-------------LEGLTVPEAAKIVK-RP 126
Query: 150 NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAE--TVLLNILRGDIARLSRCTLITT 207
C+ CG RR +++ AS + TGHN DD A L D R + L T
Sbjct: 127 VCSVCGSVRRYIMNKVASENGFTVLVTGHNLDDEASFLLGNLLNWNLDYLRRQKPVLPAT 186
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
E+G + KP EKE FTYA+ L + C YS A + + ++E P
Sbjct: 187 -EEGFSKKAKPLVLLTEKET-FTYAFINNLPFSEEICPYSKEATSLHYKHMLNEIELKHP 244
Query: 268 RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGL 319
L + + + E C CGY ++ C C + E L +
Sbjct: 245 GTKLRFYDGFQKANLFEDNMVVELKKCNVCGYPTTTDVCSFCRMKERLKSAV 296
>gi|380807833|gb|AFE75792.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Macaca mulatta]
Length = 70
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE 263
L + GE G +PRC+P ++ +KE++ YA+F+RLDYFS EC+Y+P A+RG AR+ +K LE
Sbjct: 1 LGSPGEGGALPRCRPLQFASQKEVVL-YAHFRRLDYFSEECVYAPEAFRGHARDLLKRLE 59
Query: 264 RLRPRAILDII 274
RP A+LD++
Sbjct: 60 AARPSAVLDLV 70
>gi|291279007|ref|YP_003495842.1| hypothetical protein DEFDS_0604 [Deferribacter desulfuricans SSM1]
gi|290753709|dbj|BAI80086.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 300
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 31/311 (9%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA +K + ++C+E F E F ++ + I ++F ++I + SGGKDS
Sbjct: 3 CKIC-KGKAVIKLKRHNIKLCKEHFNEFFIRQVEKAIKEFRMFSRKDKILVCVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
VL VLS+L G ++ + I+ GI Y + S V + L IV +L G
Sbjct: 62 VLWLVLSKL------GYNVTGMYINLGIDEYSEKSKTKVINFAEKNNLKYTIVDLNEL-G 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ + E+ K + C+ CG +R ++ A D +ATGHN DD A +L NIL +
Sbjct: 115 YPIPELSKK-SRRPECSVCGTVKRYYFNKIAYDYNFDVVATGHNLDDEASRLLGNILHWN 173
Query: 196 IARLSRCTLITTGEDGPI-PRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
L + + E + + KP E+EI ++A+ ++DY EC S A
Sbjct: 174 DEYLEKQLPVLPAEGKMLKKKVKPLIRLTEQEIA-SFAFLNKVDYILDECPLSVGATSLV 232
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMP-------------EQGTCERCGYIS 301
++ + +E I+ + + F + K+ E C+ CG S
Sbjct: 233 YKDALNLIEE-------KIVGTKQFFYLQYVKKLMKRLKNKNNEKGDIELKNCKICGMES 285
Query: 302 SQKWCKACVLL 312
+ C C L+
Sbjct: 286 FHEVCSFCRLV 296
>gi|383786920|ref|YP_005471489.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383109767|gb|AFG35370.1| TIGR00269 family protein [Fervidobacterium pennivorans DSM 9078]
Length = 303
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 21/305 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ + R + +C+E F E FE + + I ++F +RI + S GKDS+
Sbjct: 3 CKKCSSQAVIHLRAHNI-ALCKEHFIEFFENRVQKGISHFKMFTKKDRILVAVSSGKDSS 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY- 134
+ + L L G D+ L + G + + + + VK+ E G+ + I +
Sbjct: 62 AVLYALKRL------GYDVEGLFLKMG--RHTNAAERVVKQLEEATGVKVNIHDVTQYFG 113
Query: 135 GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
G EI K++ + C+ CG+ RR ++R A + TGHN DD A + NI+
Sbjct: 114 GLGTGEIAKIVK-RPVCSICGIVRRYWMNRYAVEHGFTVLVTGHNMDDEATFLFGNIMNW 172
Query: 195 DIARLSR-CTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRG 253
++R ++ + + + KP Y E+E + Y + + + +C ++ A
Sbjct: 173 QTEYMARQWPVLEKTHEKFVRKAKPLIYVSERET-YAYVFLNNIPFMEQKCPFAKGATSS 231
Query: 254 FAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMP-EQGTCERCGYISSQKWCKA 308
++ + LE +P R + E F+ + K E C +CGY ++++ C+
Sbjct: 232 MYKKHLNLLEFEQPGVKHRFLFGYF---EKFKDQLNRKHEVELRACSKCGYPTTEEKCQY 288
Query: 309 CVLLE 313
C L E
Sbjct: 289 CKLEE 293
>gi|436841692|ref|YP_007326070.1| PP-loop domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432170598|emb|CCO23969.1| PP-loop domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 307
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 130/312 (41%), Gaps = 20/312 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A + P C+E F + F +++ + I +L + ++I + SGGKDS
Sbjct: 3 CKVC-KAPAVISLPSHNAAFCQEHFGKFFMKQVSEGIRKRKLLEYDDKILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + L+EL G ++ L ID GI + V+ G LK+V ++ G
Sbjct: 62 GLMYALAEL------GYNVTGLHIDLGIFDSSKKARSVVEDFCKDKGYALKVVDFEK-EG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
M I K I + C CG F+R ++ A +ATGHN DD + N LR D
Sbjct: 115 VPMPLIKKHI-RRPICAICGKFKRHYFNKVALEDGYTALATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A LS + E+G + KP E E +++ K + Y C YS A
Sbjct: 174 QAYLSDQGPLLPAENGFAKKVKPLFRVTEFESA-NFSFLKGIPYHHLPCPYSGGASFTGH 232
Query: 256 REFIKDLERLRP-------RAILDIIKSGENF-RISTSTKMPEQGTCERCGYISSQKWCK 307
+ +DLE P + LD + F I K E CE C +S C
Sbjct: 233 KMLWRDLELRSPGSKRSFYKGFLD--RGQPAFAAIHEGRKDYEVKPCEECNCPTSAGICS 290
Query: 308 ACVLLEGLNRGL 319
C L + L + L
Sbjct: 291 VCRLKKQLKQAL 302
>gi|365132645|ref|ZP_09342289.1| hypothetical protein HMPREF1032_00085 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363616585|gb|EHL68021.1| hypothetical protein HMPREF1032_00085 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 285
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 19/244 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L AG+RIA+ SGGKDS +LA + +L + + +L L +D GYR ++ ++
Sbjct: 31 RLVNAGDRIAVCISGGKDSFLLAKCMQQLQKHSDVPFELEFLCMD---PGYRPENRAMIE 87
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
RN G+PL I D++ D +V + ++ C C RR L + A L +KIA
Sbjct: 88 RNAALMGVPLHIFE-TDIF----DTVVNI--EQSPCYLCARMRRGHLYKNARALGCNKIA 140
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET L+++L G + L +T G + +P E +I+ + +
Sbjct: 141 LGHHFDDVIETTLMSMLWGAEVKTMMPKLHSTSYPG-MELIRPLYLVRETDIL-AWKRYN 198
Query: 236 RLDYFSTECIYSP-------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKM 288
L + C ++ + R + I L + P+A ++I +S + ++ +
Sbjct: 199 GLTFLQCACRFTEQEADEGMHGARSETKALIAALRKTNPQADVNIFRSMHHVNLNMALGW 258
Query: 289 PEQG 292
+ G
Sbjct: 259 TQDG 262
>gi|46578552|ref|YP_009360.1| hypothetical protein DVU0135 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603868|ref|YP_968268.1| PP-loop domain-containing protein [Desulfovibrio vulgaris DP4]
gi|387152033|ref|YP_005700969.1| PP-loop domain-containing protein [Desulfovibrio vulgaris RCH1]
gi|46447963|gb|AAS94619.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120564097|gb|ABM29841.1| PP-loop domain protein [Desulfovibrio vulgaris DP4]
gi|311232477|gb|ADP85331.1| PP-loop domain protein [Desulfovibrio vulgaris RCH1]
Length = 303
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 128/305 (41%), Gaps = 26/305 (8%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + A + P C +CF F ++ + I +LF +RI + SGGKDS
Sbjct: 3 CKRC-KATAVVSLPSHNTGFCPDCFKLFFSRQVERGIHEQKLFTHDDRILVALSGGKDS- 60
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
LA +L EL+R+ G ++ L ID I + V+R +GLPL IV G
Sbjct: 61 -LALML-ELSRQ---GYNVTGLHIDLAIPVSSPAARGVVERFCALHGLPL-IVKEMANEG 114
Query: 136 WTMDEIVKVIGLKNNCTFCG-----VFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
+ + + + + C+ CG F + A+D G ++L ATGHN DD + N
Sbjct: 115 LAIPAVKERL-TRPICSACGKIKRYYFNKTAIDEGFTVL-----ATGHNLDDEVARLFSN 168
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNA 250
LR D A LS EDG + KP E E YA+ +++ C YS A
Sbjct: 169 TLRWDAAYLSDQGPGLDSEDGFTRKVKPLWRLTEFETA-NYAFLMGIEHHYAPCPYSKGA 227
Query: 251 YRGFAREFIKDLERLRPRAILDII-----KSGENFRISTSTKMPEQGTCERCGY-ISSQK 304
F + + LE P LD + F +T CE CGY SS
Sbjct: 228 SFTFYKTLWQQLEETMPGRKLDFYQGFLERGRPAFAHVEATTGMTLAPCETCGYPTSSGS 287
Query: 305 WCKAC 309
C C
Sbjct: 288 TCGVC 292
>gi|220905538|ref|YP_002480850.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869837|gb|ACL50172.1| PP-loop domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 303
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 130/308 (42%), Gaps = 18/308 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C A R C +C+ + F ++ + I G +LF ER+ + SGGKDS
Sbjct: 3 CKICKAEAAVALRSHN-AAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + EL+R+ G ++ L ID GI + V+R ++GL L I +++
Sbjct: 62 AL---MLELSRQ---GYNVTGLHIDLGIPVSSAAARGVVERFCAKHGLKLMI---REMAA 112
Query: 136 WTMD-EIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
+ VK + C+ CG +R ++ A D +ATGHN DD + N LR
Sbjct: 113 EGLAIPAVKARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRW 172
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGF 254
D A LS E G + KP E E YA+ ++ C YSP A
Sbjct: 173 DTAYLSDQGPRLDSEHGFSRKVKPLWRLTEFETA-NYAFLMGIENHYAPCPYSPGASFTT 231
Query: 255 AREFIKDLERLRPRAILDIIKSG-ENFRISTSTKMPEQGT----CERCGY-ISSQKWCKA 308
+ +++LE P LD + R + + E+G C CGY SS C
Sbjct: 232 LKGLLQNLEAAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGV 291
Query: 309 CVLLEGLN 316
C + L+
Sbjct: 292 CRIRAALS 299
>gi|397485161|ref|XP_003813729.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Pan
paniscus]
Length = 164
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Query: 121 YGLPLKIVSYKDLYG-WTMDEIVKVIG----LKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+ PL +V+Y+DL+G WTMD + + ++ CTFCGV RR+AL+ GA + I
Sbjct: 30 FXXPLTVVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIV 89
Query: 176 TGHNADDIAETVLLNILRGD 195
TGHNADD+AETVL+N LRGD
Sbjct: 90 TGHNADDMAETVLMNFLRGD 109
>gi|288931458|ref|YP_003435518.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
gi|288893706|gb|ADC65243.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
Length = 290
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 23/291 (7%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C+EC+ + + + + I + K GE++ SGGKDS + L EL + G+ L
Sbjct: 19 CKECYSKRYLSLVERSIRKYGILKRGEKVLAAISGGKDSVAMIAALKELEDK--LGIKLE 76
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCG 155
L I+ GI Y S + ++ + +PL +V Y YG+T+ ++ + C+ CG
Sbjct: 77 ALHINLGIGEYSRKSEEVSRKVCEELDVPLHVV-YLSEYGFTIGDVKR-----KACSVCG 130
Query: 156 VFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPR 215
+R ++R A D IATGH A+DI VL N+ G+ + G + +
Sbjct: 131 NAKRYIMNRFAREEGFDVIATGHCAEDIVANVLKNLYSGNFEWSEKLLPRIEGYFKFVSK 190
Query: 216 CKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIK 275
KP EKE + + K + + EC +P+ +E + ++E+ P +++
Sbjct: 191 AKPLYEIGEKENLL-FVLSKGITFLPDECPKAPDPK---WKELVYEIEKKIPGFKKGVLR 246
Query: 276 SGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVR 326
S + E +C+ CG +S + C+ C R + K G VR
Sbjct: 247 S----LVRREKVESELKSCKICGEPTSAEICQFC-------RNVKKFGKVR 286
>gi|452851702|ref|YP_007493386.1| PP-loop domain protein [Desulfovibrio piezophilus]
gi|451895356|emb|CCH48235.1| PP-loop domain protein [Desulfovibrio piezophilus]
Length = 309
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 15/305 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
CS C ++ A + P C ECF F ++ I ++F ERI + SGGKDS
Sbjct: 3 CSRC-KKLACVALPSHHAGFCPECFPLFFTRQVETAIRREKMFTKDERILVALSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L + EL + G D+ L ID GI + + V+ L L + + +G
Sbjct: 62 GL---MLELKLQ---GYDVTGLHIDLGIPDSSYKARKKVENFCDAQDLKLDVFEMEK-WG 114
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ +I + + + C CG +R +R A D +ATGHN DD + N LR D
Sbjct: 115 LPVCDIKEHVD-RPVCAVCGKMKRHHFNRIAREGGYDALATGHNLDDEVARLFANTLRWD 173
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
A LS + DG + + KP E E YA+ K ++ S C YS A
Sbjct: 174 TAYLSDQGPVLPAADGFVRKVKPLFRLTEFETA-NYAFLKGIEIHSDPCPYSSGASFTNH 232
Query: 256 REFIKDLERLRPRAILD----IIKSGENFRISTSTKM-PEQGTCERCGYISSQKWCKACV 310
+E +LE P ++ G+ + ++ E C+ CG +S C C
Sbjct: 233 KELWGELEYRSPGQKFQFYQGFLQRGKQAFANLEKEIGAELKPCKECGSPTSVGRCSICR 292
Query: 311 LLEGL 315
+ E +
Sbjct: 293 IKESV 297
>gi|268610221|ref|ZP_06143948.1| hypothetical protein RflaF_12069 [Ruminococcus flavefaciens FD-1]
Length = 278
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 31/282 (10%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++H+ I +L + G++I + SGGKDS ++A L L + Y + +D GY
Sbjct: 18 KLHEAIKEYELIQNGDKICVCISGGKDSMLMAKCLQMLEKHGTYSFTCKFIVMD---PGY 74
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+++L +K+N + G+P+++ S + E KN C C RR L + A
Sbjct: 75 SEENLIKIKQNAEKLGIPMEVYSTRIFESTEKAE-------KNPCFLCARLRRGWLYKKA 127
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
L +KIA GH+ DD+ ET+L+ +L G + L + +G + +P E +
Sbjct: 128 QELGCNKIALGHHFDDVIETILMGMLYGSQVQTMMPKLHSENYEG-VHLIRPLYLVRESD 186
Query: 227 IMFTYAYFKRLDYFSTECIYSP-----NAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
I+ +A L++ C + + RG + + ++ + P ++I +S EN
Sbjct: 187 II-NWASENGLEFIRCACRVTEKKGEGTSKRGEVKRLLAEMRKNNPAVDMNIFRSVENVN 245
Query: 282 ISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMG 323
+ T IS K + LE N GL G
Sbjct: 246 LQT--------------LISYHKGDEYHSFLESFNEGLTLKG 273
>gi|227486136|ref|ZP_03916452.1| PP-loop family ATPase [Anaerococcus lactolyticus ATCC 51172]
gi|227235900|gb|EEI85915.1| PP-loop family ATPase [Anaerococcus lactolyticus ATCC 51172]
Length = 270
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 11/226 (4%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L + G+R+ + SGGKDS +LA ++ EL++ D+ LS+D GY +++L+ +K
Sbjct: 31 KLIEEGDRVGVAISGGKDSLILAKLIEELHKHGPVDFDVEYLSMD---PGYDEENLELLK 87
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
+N +P KI D + + E + G N C C RR L A L +K+A
Sbjct: 88 KNLAYLQIPGKIY---DSRVFDISETLADGG--NPCYLCARMRRGFLYAKAKELGCNKLA 142
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM--FTYAY 233
GH+ +D+ ET+++N+L + + L D + +P Y E++I+ +A
Sbjct: 143 LGHHLNDVIETIMINVLYAGNYKTMKPKLTAQNFDDML-LIRPLYYLREEDIIRWRDFAE 201
Query: 234 FKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K LD T S + R ++ I DL++ P + I++S EN
Sbjct: 202 LKALDCACTVTKSSESHTRKKVKDLIADLKKDNPNVEMSILRSSEN 247
>gi|444911413|ref|ZP_21231588.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Cystobacter fuscus DSM
2262]
gi|444718171|gb|ELW58987.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Cystobacter fuscus DSM
2262]
Length = 286
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
L G+RI +G SGGKDS L ++L EL RR +L +++D+G G+ L+ +
Sbjct: 25 LVSEGDRIMVGVSGGKDSYTLLYLLRELQRRAPVKFELLAVNLDQGHPGFPAHVLEGWFQ 84
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+E G K++ +D Y ++ K K CT C RR L A L +KIA
Sbjct: 85 SE---GFAYKMLK-EDTYSVVLE---KTPPGKTQCTVCSRLRRGILYTAAVELGCNKIAL 137
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ T+LLN+ L + +DG +P Y EK+I YA K+
Sbjct: 138 GHHRDDLVHTLLLNLFFA--GSLKAMPPVLKSDDGRNTVIRPLCYAPEKDIA-AYAALKQ 194
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
+ C N R ++ +++L R P ++ + N R S
Sbjct: 195 FPIIPCDLCGSQENLQRKRMQKLVEELGRDIPNVRQSVLSAMSNVRPS 242
>gi|350565009|ref|ZP_08933807.1| PP-loop family protein [Peptoniphilus indolicus ATCC 29427]
gi|348664198|gb|EGY80713.1| PP-loop family protein [Peptoniphilus indolicus ATCC 29427]
Length = 273
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 15/232 (6%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++IA+ SGGKDS LA L EL R +L +++D GY + + +T+K
Sbjct: 35 MIQDGDKIAVAISGGKDSLTLAKCLQELKRHGKMNFELEFIAMD---PGYNNKNRETLKY 91
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
N + G+PLKI + D++ E+ + + C C RR L A L +K+A
Sbjct: 92 NCERLGIPLKIHN-SDVF-----EVSQKVSDGYPCYMCARMRRGNLYAKAQELGCNKLAL 145
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ ET++LNIL + L + +G + +P Y E+ ++ +
Sbjct: 146 GHHFDDVIETIMLNILFAGNYKTMMPKLHSQNFEG-LELIRPMYYVREESVI-NFINSTG 203
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDL----ERLRPRAILDIIKSGENFRIST 284
L C + G R +IK+L E P A + I++S EN +
Sbjct: 204 LHALDCACEVAQKKEEGSMRGYIKNLIARVEEKNPNAAISILRSAENVELGA 255
>gi|310823887|ref|YP_003956245.1| tRNA 2-thiocytidine biosynthesis protein ttca [Stigmatella
aurantiaca DW4/3-1]
gi|309396959|gb|ADO74418.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Stigmatella
aurantiaca DW4/3-1]
Length = 279
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
L + G+RI +G SGGKDS L ++L E+ RR +L +++D+G G+ D+L+ +
Sbjct: 24 LIQEGDRIMVGVSGGKDSYTLLYLLREMQRRAPVRFELLAVNLDQGHPGFPADTLEGYFQ 83
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
E G P K++ +D Y ++ K K C+ C RR L A L KIA
Sbjct: 84 KE---GYPYKMLK-EDTYSIVLE---KTPPGKTQCSVCSRMRRGILYTAAVELGCTKIAL 136
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ T+LLN+ L + +DG +P Y EKEI A F
Sbjct: 137 GHHRDDLIHTLLLNLFFA--GSLKAMPPLLRSDDGRNTVIRPLCYAPEKEI----AQFAE 190
Query: 237 LDYFST----ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
L F C N R + +++L R P ++ + N R S
Sbjct: 191 LKGFPIIPCDLCGSQENLQRKRMQRLVEELGREIPNVRQSLLSAMGNVRPS 241
>gi|154505074|ref|ZP_02041812.1| hypothetical protein RUMGNA_02584 [Ruminococcus gnavus ATCC 29149]
gi|153794553|gb|EDN76973.1| rhodanese-like protein [Ruminococcus gnavus ATCC 29149]
Length = 391
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 23/279 (8%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
L R + +E+ R+ F++ + + +L + G+RIA+ SGGKDS ++A + EL
Sbjct: 113 LLRAEEIEKSIRKKFHKRLFSRFAKAVREYELVQEGDRIAVCISGGKDSMLMAKLFQELK 172
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
+ + + ++ L +D GY + + + +++N G+P+KI D++ D
Sbjct: 173 KHNKFPFEVEYLVMD---PGYSELNRKLIEQNAKMMGIPIKIFE-SDIFDAVFD------ 222
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L
Sbjct: 223 VEKSPCYLCARMRRGHLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLH 282
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----------SPNAYRGF 254
+T +G + +P E +I Y L + C + S + R
Sbjct: 283 STNFEG-MELIRPLYLVREDDIKHWRDY-NHLHFLQCACRFTETCSTCSVDGSSASKRME 340
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ I L+ P +I KS EN +ST E G
Sbjct: 341 IKHLIAKLKETNPYVEGNIFKSVENVNLSTVIAYKENGV 379
>gi|336432861|ref|ZP_08612692.1| hypothetical protein HMPREF0991_01811 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018143|gb|EGN47896.1| hypothetical protein HMPREF0991_01811 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 391
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 23/279 (8%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
L R + +E+ R+ F++ + + +L + G+RIA+ SGGKDS ++A + EL
Sbjct: 113 LLRAEEIEKSIRKKFHKRLFSRFAKAVREYELVQEGDRIAVCISGGKDSMLMAKLFQELK 172
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
+ + + ++ L +D GY + + + +++N G+P+KI D++ D
Sbjct: 173 KHNKFPFEVEYLVMD---PGYSELNRKLIEQNAKMMGIPIKIFE-SDIFDAVFD------ 222
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L
Sbjct: 223 VEKSPCYLCARMRRGHLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLH 282
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----------SPNAYRGF 254
+T +G + +P E +I Y L + C + S + R
Sbjct: 283 STNFEG-MELIRPLYLVREDDIKHWRDY-NHLHFLQCACRFTETCSTCSADGSSASKRME 340
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ I L+ P +I KS EN +ST E G
Sbjct: 341 IKHLIAKLKETNPYVEGNIFKSVENVNLSTVIAYKENGV 379
>gi|299143332|ref|ZP_07036412.1| PP-loop family protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517817|gb|EFI41556.1| PP-loop family protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 282
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 14/232 (6%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ G+RIA+ SGGKDS LA + EL R +L +++D GYR ++ Q ++
Sbjct: 37 EMISEGDRIAVAISGGKDSLTLAKLFQELKRHGKMNFELEFIAMD---PGYRKENRQVLE 93
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + G+P+KI + D++ E+ + N C C RR L A L +K+A
Sbjct: 94 YNCEKMGIPVKIHN-SDVF-----EVANRVAQNNPCYMCARMRRGNLYSKAQELGCNKLA 147
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ +D+ ETV+LN++ + L + +G + +P Y E+E + +
Sbjct: 148 LGHHFNDVIETVMLNVIFAGNFKTMMPKLHSDNFEG-LELIRPMYYV-EEEAIKRFMRST 205
Query: 236 RLDYFSTECIYSPNA---YRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L C + R + ++ I D++++ A ++I++S EN +
Sbjct: 206 GLHALDCACAIAEKKEGNMRFYIKDLIADIKKVHKNADINILRSAENVNMGA 257
>gi|302348716|ref|YP_003816354.1| ATPase, PP-loop superfamily [Acidilobus saccharovorans 345-15]
gi|302329128|gb|ADL19323.1| ATPase, PP-loop superfamily [Acidilobus saccharovorans 345-15]
Length = 338
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 13/298 (4%)
Query: 36 CRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLF 95
C + F E +E + I+ + K GE + + SGGKDS L VL E+ G+++
Sbjct: 38 CDKHFKEYVKERVKNNIIKYNMVKRGETLLVAVSGGKDSVTLMNVLDEIA--PELGVNIV 95
Query: 96 LLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSY--KDLYGWTMDEIVKVIGLKNNCTF 153
+ I G+ + + SL+ R+ +K V+ K+L G M EI++ + C+
Sbjct: 96 AVHIVLGMGEFSEKSLEAF-RDSCSKAKNVKCVTVDLKELLGMYMPEIIRR-SRRPACSV 153
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPI 213
CG+ +R L+ A L IATGH+ +D+ + N + + +++ ++ E +
Sbjct: 154 CGLVKRYILNAMAVSLGASSIATGHHMNDLMTYAIKNFMEQKLDNITKLGPVSESEGSAV 213
Query: 214 PRCKPFKYTYEKEIMFTYAYFKR--LDYFSTECIY-SPNAYRGFAREFIKDLERLRPRAI 270
R +P YE E T A+ K L+Y EC + S ++ + E P
Sbjct: 214 KRVRPLYDIYEDE---TRAFVKVYGLNYVDIECPFKSTLTLEVIIKDMLSRAESESPSLT 270
Query: 271 LDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSR 328
+ ++ S C CG S+ C C L L G P VRSR
Sbjct: 271 ISAARALARNLPSYPRPASPPNRCRLCGMPSNGDVCGFCRLTMSLT-GAPLGPEVRSR 327
>gi|291541683|emb|CBL14793.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Ruminococcus bromii L2-63]
Length = 382
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 32 LEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYG 91
+E+ R+ F + I+ +L + ++IA+ SGGKDS ++A + EL R + +
Sbjct: 109 VEKSIRKKFSKTIWSRFTAAIIEYKLVEPNDKIAVCISGGKDSMLMAKLFQELKRHNKFP 168
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG--WTMDEIVKVIGLKN 149
+L L +D G S D +++ R + +P+ + D++ + +D K
Sbjct: 169 FELVFLVMDPGYSVENRDVIESNAR---RLNIPITVFE-TDIFNSVYNVD--------KY 216
Query: 150 NCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGE 209
C C RR L + A L +KIA GH+ DD+ ET+L+ +L G + L +T
Sbjct: 217 PCYLCARMRRGYLYKKAKQLGCNKIALGHHYDDVIETILMGMLYGGQVQTMMPKLHSTNY 276
Query: 210 DGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-------SPNAYRGFAREFIK-- 260
+G + +P E EI Y +L++ C + SPN+ G R+ IK
Sbjct: 277 EG-MELIRPLYLVREAEIKHWRDY-NKLNFIQCACRFTDTCTTCSPNSNTGSKRQEIKQL 334
Query: 261 --DLERLRPRAILDIIKSGENFRIST 284
+L+++ P+ +I S EN + T
Sbjct: 335 IANLKKINPQIESNIFHSVENVNLDT 360
>gi|302344685|ref|YP_003809214.1| PP-loop domain-containing protein [Desulfarculus baarsii DSM 2075]
gi|301641298|gb|ADK86620.1| PP-loop domain protein [Desulfarculus baarsii DSM 2075]
Length = 324
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 127/305 (41%), Gaps = 14/305 (4%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
G C+ C Q A + P C C F+ ++ + I + + G+ + + SGGK
Sbjct: 5 GMKCTRCRQ-PARFRLPAHNAHFCDPCLDLFFKRQVQKAIKDYAMLRPGQEVLVAVSGGK 63
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS L L EL R G+ L L + + + SLQ+ ++ + G PL S
Sbjct: 64 DSLALWLTLEELGYR-TAGVHLCL-----EMGEFSEASLQSCRQMAARLGRPLHEASLGQ 117
Query: 133 LY-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
L G +M EIV + C+ CG F+R L+R L D +ATGH+ DD A +L N+
Sbjct: 118 LTDGLSMQEIVWAT-RRQFCSVCGTFKRHFLNRLCLELGFDTVATGHHLDDEAGRLLGNL 176
Query: 192 LRGDIARL-SRCTLITTGED---GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS 247
+ + L + ++ +G D G + KP EI +A L +C S
Sbjct: 177 IHNHLDYLQAMWPVLESGGDAATGFARKVKPLCRLEGAEIR-AFAQVHELPVAQGKCAGS 235
Query: 248 PNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
A + ++ + LE P + + + G C+ CG + + C
Sbjct: 236 KGATLLYYQKAMDQLEADMPGTKHNFYLEFLRQKAAPPPPPQLGGRCQICGAPTMSELCG 295
Query: 308 ACVLL 312
C +L
Sbjct: 296 VCRML 300
>gi|333977869|ref|YP_004515814.1| PP-loop domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821350|gb|AEG14013.1| PP-loop domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 309
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 124/305 (40%), Gaps = 17/305 (5%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
R C C + ++ + T C+E F E F ++ + I ++ G+++ + SGGKD
Sbjct: 2 RRCVKC-KGESVINLKSTNAAFCQEHFIEYFLRQVARAIKKYKMLAEGQQVLVAVSGGKD 60
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S L L L R + L +D GI Y + S +R G L ++S D
Sbjct: 61 SMALWDALLSLGYRADG------LHVDLGIGEYSEGSRLICERFAANRGARLYVLSLMDT 114
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
YG M EIV+ + +C+ CG +R ++ +ATGHN DD +L N+
Sbjct: 115 YGSNMQEIVRRT-RRVSCSVCGTVKRYLMNLVVQQKGYRVVATGHNLDDETAALLGNLFG 173
Query: 194 GDIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
L+R +P R KP E E Y K +++ + +C + A
Sbjct: 174 WQEGYLARQYPHLPSTHARLPARVKPLVRLGEMETEL-YCRLKGIEFLADDCPLARGATS 232
Query: 253 GFAREFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
+E I LE P R + G I T ++ C CG ++ C
Sbjct: 233 LAYKELINSLEEKMPGTKQRFLFGFWDRGRRSFIDTPVELK---GCSLCGQPTTADTCLF 289
Query: 309 CVLLE 313
C L++
Sbjct: 290 CRLMQ 294
>gi|383458489|ref|YP_005372478.1| hypothetical protein COCOR_06525 [Corallococcus coralloides DSM
2259]
gi|380730975|gb|AFE06977.1| hypothetical protein COCOR_06525 [Corallococcus coralloides DSM
2259]
Length = 281
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I +L +AG+RI +G SGGKDS + +L EL RR DL +++D+G G+
Sbjct: 17 RAIADFRLIEAGDRIMVGVSGGKDSYTMLHLLRELQRRAPVKFDLLAVNLDQGHPGFPGH 76
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L+ + E G K++ +D Y ++ K K C+ C RR L A L
Sbjct: 77 ILEGYFQKE---GYAYKMLK-EDTYSIVLE---KTPPGKTQCSVCSRLRRGILYNAAVHL 129
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+KIA GH+ DD+ T+LLN+ L + +DG +P Y EKEI+
Sbjct: 130 GCNKIALGHHRDDLIHTMLLNMFFA--GSLKAMPPLLKSDDGRNVVIRPLCYAPEKEII- 186
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
+A K+ + C N R ++ ++DL + P ++ + N R
Sbjct: 187 QFAEAKQFPIIPCDLCGSQENLQRKRMQKLVEDLGKEIPNVRQSLLNAMSNVR 239
>gi|325678703|ref|ZP_08158312.1| PP-loop family protein [Ruminococcus albus 8]
gi|324109604|gb|EGC03811.1| PP-loop family protein [Ruminococcus albus 8]
Length = 290
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL + G++IA+ SGGKDS ++A + L R D+ + +D GY ++ Q +
Sbjct: 31 QLIQEGDKIAVCISGGKDSMMMAMCMKRLQRYSKVPFDVEYIVMD---PGYNAENRQKII 87
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + +P++I K D +V V +N C C RR L + A L +KIA
Sbjct: 88 DNAAKLEIPVRIFDTK-----IFDSVVNV--RQNPCYLCARMRRGYLYKNAQELGCNKIA 140
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L G + + + +G + +P Y +E + + +
Sbjct: 141 LGHHFDDVIETILMGMLYGSQVQTMMPKIHSENFEG-MQLIRPL-YMVREEDIIKWCRYN 198
Query: 236 RLDYFSTECIY----------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L++ C + S N+ R +E +K L P ++I +S EN + T
Sbjct: 199 GLEFIQCACRFTEEREVYDDGSSNSKRQEVKELLKMLRERSPAIDMNIFRSVENVNLQT 257
>gi|268608249|ref|ZP_06141976.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Ruminococcus flavefaciens FD-1]
Length = 374
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL + +RIA+ SGGKDS ++A + EL R + ++ L +D GY ++ + ++
Sbjct: 128 QLVQPNDRIAVCISGGKDSMLMAKLFQELKRHDKFPFEVVFLVMD---PGYSPENRRVIE 184
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P+ I D + + KN C C RR L A L +KIA
Sbjct: 185 DNARSMSIPVHIFE-----STIFDSVYNI--EKNPCYICARMRRGYLYSKAKELGCNKIA 237
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L G + L +T DG + +P E EI Y
Sbjct: 238 LGHHFDDVIETILMGMLYGGQVQTMMPKLHSTNFDG-MELIRPLYLVREDEIKHWRDY-N 295
Query: 236 RLDYFSTECIYS-------PN----AYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C ++ P+ + R + I +L+++ P+ +I +S EN +ST
Sbjct: 296 DLHFIQCACKFTDTCTTCAPDSRSVSKRLEVKNLIAELKKVNPQVEKNIFRSVENVNLST 355
Query: 285 STKMPEQG 292
+ G
Sbjct: 356 VIAYKQHG 363
>gi|304439167|ref|ZP_07399085.1| PP-loop family protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372299|gb|EFM25887.1| PP-loop family protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 276
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L + G++IA+ SGGKDS LA + EL + + DL +++D GY+ + L +
Sbjct: 36 ELVEKGDKIAVAISGGKDSLTLAKLFQELKKHKKFDFDLEFIAMD---PGYKKEKLDQML 92
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + G+P+K V D++ E+ + I +N C C RR L A L +K+A
Sbjct: 93 YNCEKLGIPVK-VHQSDIF-----EVSERIAGENPCYMCARMRRGNLYAKAQELGCNKLA 146
Query: 176 TGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
GH+ DD+ ETV+LNI+ GD + E+ + R P Y E+E + +
Sbjct: 147 LGHHFDDVIETVMLNIIFAGDFKTMMPKLKAQNFENMELIR--PM-YLIEEESIIRFMKS 203
Query: 235 KRLDYFSTECIY----SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
L C S + R + ++ IK+L++ ++I+++ EN +
Sbjct: 204 TGLTAMDCACTVTSKKSGGSKRDYVKQLIKELKKENEVVGINIMRATENVNM 255
>gi|295109785|emb|CBL23738.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Ruminococcus obeum A2-162]
Length = 383
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 25/291 (8%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GRL + N+ A +R K +E+ + F + + I +L + G++IA+ SGGK
Sbjct: 96 GRLMANHNE---AEQRTKDIERSIIKKFRKPIWRRFTKAIREYELVQDGDKIAVCISGGK 152
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS ++A + EL+R ++ L ++ GY + + QT+K N +P+ + D
Sbjct: 153 DSMLMAKLFQELSRHGKKNFEVVFLVMN---PGYNEINYQTIKDNAKILNVPITVFE-SD 208
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
++ E ++ C C RR L A L +KIA GH+ DD+ ET+L+ +L
Sbjct: 209 IFNIVASE------EQSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGML 262
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN--- 249
G + L +T +G + +P E +I+ +A + L + C ++ +
Sbjct: 263 YGAQVQTMMPKLHSTNFEG-MELIRPLYLIREADIIH-WANYNDLHFIQCACRFTEHCAS 320
Query: 250 -------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ R +E I +L + P +I +S EN ++T + G
Sbjct: 321 CGGTEKGSKRAEIKELIHELAQKDPVIEYNIFRSVENVNLNTVIGYKQDGV 371
>gi|188585053|ref|YP_001916598.1| PP-loop domain-containing protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349740|gb|ACB84010.1| PP-loop domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 313
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 14/292 (4%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C+ + A L+ + +C E + ++ + I ++ E++ + SGGKDS
Sbjct: 3 CFKCDSQ-AILRIKRHKATLCETHLVEHLQNQMIKAIKKFKMLPPNEKVIVAISGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
L +L L+R Y D F ID GI Y S++ + + L +S LY
Sbjct: 62 ALWDML--LDR--GYKADAFY--IDLGIDEYSKTSMEKAQSFAEKVSGNLYTISLPKLYN 115
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ EI + ++ C+ CG+ +R ++ A +ATGHN DD A ++L N LR
Sbjct: 116 TGIKEISRN-NPRSACSACGLIKRYIMNIFAKYGNYHAVATGHNLDDEASSLLGNTLRWQ 174
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
LSR + +G + KP EKE Y K +DY EC + A
Sbjct: 175 TGYLSRQSPSMPSNNGLAKKIKPLCRLAEKETA-AYCITKNIDYILEECPMAQGASSFDY 233
Query: 256 REFIKDLERLRP----RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQ 303
+E + +LE P + LD +++ + + S + C CG +SQ
Sbjct: 234 KEVLNNLELKSPGTKDQFYLDFLRTAQPYFKSNKQDI-TLVKCPTCGEPTSQ 284
>gi|108759455|ref|YP_634115.1| hypothetical protein MXAN_5980 [Myxococcus xanthus DK 1622]
gi|123247362|sp|Q1CZQ8.1|TTCA_MYXXD RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|108463335|gb|ABF88520.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 284
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I ++L + G+RI +G SGGKDS + +L EL RR +L +++D+G G+ D
Sbjct: 21 RAIADHRLIEDGDRIMVGVSGGKDSYTMLHLLRELQRRAPVKFELLAVNLDQGHPGFPAD 80
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L+ + E G P K++ +D Y ++ K K C+ C RR L A L
Sbjct: 81 KLEAYFQRE---GYPYKLLK-EDTYSIVLE---KTPPGKTQCSVCSRMRRGILYTAAVEL 133
Query: 170 KVDKIATGHNADDIAETVLLNI-LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM 228
KIA GH+ DD+ T+LLN+ G I + + +DG +P Y EK+I
Sbjct: 134 GCTKIALGHHRDDLIHTLLLNLFFAGSIKAMPP---LLRSDDGRNVVIRPLCYAPEKDI- 189
Query: 229 FTYAYFKRLDYFST----ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
A F L F C N R + +++L + P ++ + N R S
Sbjct: 190 ---AKFAELMAFPIIPCDLCGTQENLQRKRMQRLMEELGKEIPNVRQSVLNAMANVRPS 245
>gi|291545412|emb|CBL18520.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Ruminococcus sp. SR1/5]
Length = 382
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 23/287 (8%)
Query: 9 KKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGA 68
+K G+ S + A +R K +E R+ F++ + I +L K G++IA+
Sbjct: 100 QKESGKENSEEEENDAMEQRRKDIELSIRKKFHKQLFSRFARGINDYELVKPGDKIAVCI 159
Query: 69 SGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIV 128
SGGKDS ++A + EL R + + +L L +D GY + + ++ N G+P+ +
Sbjct: 160 SGGKDSMLMAKLFQELKRHNKFPFELVFLVMD---PGYNEANRAVIEHNARLLGIPITVF 216
Query: 129 SYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVL 188
+ D + + K+ C C RR L A L +KIA GH+ DD+ ET+L
Sbjct: 217 ETE-----IFDAVYNI--EKSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETIL 269
Query: 189 LNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-- 246
+ +L G + L +T +G + +P E +I Y L + C +
Sbjct: 270 MGMLYGAQVQTMMPKLHSTNFEG-MQLIRPMYLIREADIKHWRDY-NDLHFIQCACKFTD 327
Query: 247 ---------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
+ + R + I +L+++ P +I +S EN + T
Sbjct: 328 TCTTCRTDGTSVSKRMEIKNLIAELKKVNPHVESNIFRSVENVNLHT 374
>gi|317055960|ref|YP_004104427.1| PP-loop domain-containing protein [Ruminococcus albus 7]
gi|315448229|gb|ADU21793.1| PP-loop domain protein [Ruminococcus albus 7]
Length = 290
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL + G++IA+ SGGKDS ++A + L R D+ + +D GY + Q +
Sbjct: 31 QLIQEGDKIAVCISGGKDSMMMAVCMKRLQRYSKVPFDVEYIVMD---PGYAPANRQKII 87
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + +P+KI K D +V V +N C C RR L + A L +KIA
Sbjct: 88 DNAAKLEIPIKIFETK-----IFDSVVNV--KQNPCYLCARMRRGYLYKNAQELGCNKIA 140
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L G + + + +G + +P Y +E + + +
Sbjct: 141 LGHHFDDVIETILMGMLYGSQVQTMMPKIHSENFEG-MQLIRPL-YMVREEDIIKWCGYN 198
Query: 236 RLDYFSTECIY----------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C + S N+ R +E +K L + P +I +S EN + T
Sbjct: 199 DLKFIQCACRFTEEREVYDDGSSNSKRQEIKELLKKLREISPAIDKNIFRSVENVNLQT 257
>gi|397904213|ref|ZP_10505134.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Caloramator australicus
RC3]
gi|343178960|emb|CCC58033.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Caloramator australicus
RC3]
Length = 246
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+R+ +G SGGKDST+L + LS R +L ++ID G+ G L ++
Sbjct: 17 MLQNGDRVVVGLSGGKDSTLLLYALSLYQRFSPQKFELGAITIDMGLEGMNLTPL--IEF 74
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
E+ +P KIV D+ D + N C+ C RR AL A + +KIA
Sbjct: 75 TEL-LNVPYKIVQ-TDIAKIVFD----IRKETNPCSLCAKLRRGALYNSAKEMGYNKIAL 128
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
H+ADD ET+L+++ R+S + IT ED I +PF Y YEK+I
Sbjct: 129 AHHADDAIETLLMSLFFE--GRISTFSPITYFEDKDIYLIRPFVYLYEKDI 177
>gi|168334209|ref|ZP_02692412.1| PP-loop domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 275
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL K G++IA+ SGGKDS VLA + EL R +L L +D GY + + + +
Sbjct: 35 QLIKDGDKIAVCISGGKDSFVLAKCMQELLRHGRNNFELVFLVMD---PGYSNQNRELII 91
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N G+P++ ++ + +V +G N C C RR L + A L +KIA
Sbjct: 92 ENAKLMGIPIQ------MFESPIFTVVADVG-GNPCYLCARMRRGYLYKEAQQLGCNKIA 144
Query: 176 TGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
GH+ DD+ ET L+N+L G+I + + + P+ +P EK+I+ + +
Sbjct: 145 LGHHFDDVIETTLMNMLYSGEIKTM--MPKLKSLNFKPMELIRPLYMVKEKDIL-AFKDY 201
Query: 235 KRLDYFSTECIYSP-------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
+L + C+ + ++ R ++ I++ ++ P +I +S N + T
Sbjct: 202 NKLMFLQCACLMTEKIANDNVDSKRQEMKKLIQNFRKINPHIDRNIFQSMHNINLDT 258
>gi|153812311|ref|ZP_01964979.1| hypothetical protein RUMOBE_02710 [Ruminococcus obeum ATCC 29174]
gi|149831718|gb|EDM86805.1| PP-loop family protein [Ruminococcus obeum ATCC 29174]
Length = 291
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 22/290 (7%)
Query: 14 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKD 73
+L AA +R K +E+ + F + + I +L + G++IA+ SGGKD
Sbjct: 2 KLSKMMADHNAAEQRTKDIERSIIKKFRKPIWRRFTKAIREYELVQDGDKIAVCISGGKD 61
Query: 74 STVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
S ++A + EL+R ++ L ++ GY + + QT+K N +P+ + D+
Sbjct: 62 SMLMAKLFQELSRHGKKNFEVVFLVMN---PGYNEINYQTIKDNAQILNVPITVFE-SDI 117
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+ E ++ C C RR L A L +KIA GH+ DD+ ET+L+ +L
Sbjct: 118 FNIVASE------EQSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLY 171
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN---- 249
G + L +T +G + +P E +I+ +A + L + C ++ +
Sbjct: 172 GAQVQTMMPKLHSTNFEG-MELIRPLYLIREADIIH-WANYNDLHFIQCACRFTEHCASC 229
Query: 250 ------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ R +E I +L + P +I +S EN ++T + G
Sbjct: 230 GGTEKGSKRAEIKELIHELAQKDPVIEYNIFRSVENVNLNTVIGYKQDGV 279
>gi|227872664|ref|ZP_03990994.1| PP-loop family ATPase [Oribacterium sinus F0268]
gi|227841478|gb|EEJ51778.1| PP-loop family ATPase [Oribacterium sinus F0268]
Length = 393
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 27 KRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR 86
+R K +E R+ F + + I +L + G+ I + SGGKDS ++A + EL R
Sbjct: 107 ERQKEIELSLRKKFKKSIFTPFAKAINDYELIQEGDSICVCISGGKDSMIMAKLFQELKR 166
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG--WTMDEIVKV 144
+ + L L +D G + Y + Q ++ N G+PL+ D++ +T+D
Sbjct: 167 HNKFPFTLHFLCMDPGYNAY---NRQIIEENAALLGIPLEFFQ-SDIFESVFTID----- 217
Query: 145 IGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTL 204
+ C C RR L A L +KIA GH+ DD+ ETVL+ +L + L
Sbjct: 218 ---SSPCYVCARMRRGHLYSKAKELGCNKIALGHHFDDVIETVLMGMLYSGQFQAMMPKL 274
Query: 205 ITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----------SPNAYRG 253
+T +G + +P Y EK+I+ + + +L++ C + + ++ R
Sbjct: 275 HSTNFEG-MELIRPLYYVREKDIIH-WRNYNQLNFIQCACKFTETCSTCQVDGTTSSKRL 332
Query: 254 FAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
++ I L+ P +I +S EN I+T + +G
Sbjct: 333 EIKKLIASLKEANPFIEKNIFRSTENVSINTILGLKTEG 371
>gi|332296049|ref|YP_004437972.1| PP-loop domain-containing protein [Thermodesulfobium narugense DSM
14796]
gi|332179152|gb|AEE14841.1| PP-loop domain protein [Thermodesulfobium narugense DSM 14796]
Length = 298
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C ++ A + P+ ++C E F E + +VI +FK + + + SGGKDS
Sbjct: 3 CTVC-KKDAVINLPRHNLKLCEEHFKEHIIYQTQRVIKHFNMFKKEDTLLLAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK---RNEIQYGLPLKIVSYKD 132
L F+L L G ++ L I Y + SL+ VK + + + ++ +Y D
Sbjct: 62 GLWFILKGL------GFNVKALHIIMPFGEYSEKSLEIVKSCAKKLDEKPIYIEANNYLD 115
Query: 133 LYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
+ + +I K K C+FCG +R L AS + I TGHN DD +L N+L
Sbjct: 116 IDFFKALKIYK----KPICSFCGKIKRYILSTYASRNSYNTIVTGHNLDDETAFLLGNLL 171
Query: 193 RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
+ L + I G + KP ++E+ F +A +++Y C YS A
Sbjct: 172 HWHVEYLKKQGPILEGNQFMPKKVKPLIRITDEEMSF-FAKVSKIEYVVERCPYSKEAKS 230
Query: 253 GFAREFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTCERCGY 299
F + + ++++ P L I++ +N + + P++ C+ C Y
Sbjct: 231 VFFKNILNEIDKYMPGTKSFFYLQYIENIKNNIFKKTIEEPKE--CKICHY 279
>gi|302386913|ref|YP_003822735.1| rhodanese domain-containing protein [Clostridium saccharolyticum
WM1]
gi|302197541|gb|ADL05112.1| Rhodanese domain protein [Clostridium saccharolyticum WM1]
Length = 396
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 23/296 (7%)
Query: 12 GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
G L T + + R + +E+ R+ F++ + I +L K +RIA+ SGG
Sbjct: 97 GEWLLRTMEREDKSDDRLENIEKSIRKKFHKELFSRFAKAINEYELVKENDRIAVCISGG 156
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDS ++A + EL R + + +L L +D GY + + Q ++ N +P+ + +
Sbjct: 157 KDSMLMAKLFQELRRHNKFPFELVFLVMD---PGYNETNRQVIESNARLLNIPITVFETQ 213
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
D + V K+ C C RR L A L +KIA GH+ DD+ ET+L+ +
Sbjct: 214 -----IFDAVYDV--EKSPCYLCARMRRGYLYNKARELGCNKIALGHHYDDVIETILMGM 266
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY----- 246
+ G + L +T +G + +P E +I + + L + C +
Sbjct: 267 MYGAQIQTMMPKLHSTNFEG-MELIRPMYLIREDDIK-DWRDYNGLHFIQCACRFTDTCT 324
Query: 247 ------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCER 296
S + R + I+ L+ P +I KS EN ++T E GT
Sbjct: 325 TCRTDGSTGSKRVEIKNLIRQLKETNPYIESNIFKSVENVNLNTIIAYKENGTTHH 380
>gi|402310951|ref|ZP_10829907.1| PP-loop family protein [Eubacterium sp. AS15]
gi|400366455|gb|EJP19487.1| PP-loop family protein [Eubacterium sp. AS15]
Length = 285
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 19/273 (6%)
Query: 12 GGRLCST--CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
GG C T NQ K++L K I ++ E++ + + I QL G++IA+ S
Sbjct: 4 GGNFCKTLEVNQNKSSLDEIK--RSIIKKYRKEIWNK-FTKAIRNYQLVNEGDKIAVAIS 60
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS ++A + EL N D+ + +D GY D ++ N +P+KI
Sbjct: 61 GGKDSMLMAKLFQELKEHGNVNFDVEFVVMD---PGYHKDIRNLLEENCKYLEIPIKIFD 117
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
D++ I I C C RR AL A LK +K+A GH+ +D+ ET +L
Sbjct: 118 -TDVFA-----IADKIAGDYPCYMCAKMRRGALYNIAEQLKCNKLALGHHFNDVIETTML 171
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
N+L + L + D I +P EK I+ Y L + C+ +
Sbjct: 172 NVLYAGSYKTMLPKLKSKNFDS-IELIRPLFLIEEKSII-KYTQNAGLHMLNCACMIAAK 229
Query: 250 ---AYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ R +E I++++R P +I S +N
Sbjct: 230 KTGSKRYEVKELIENMKRTNPNVDKNIFASAQN 262
>gi|319936857|ref|ZP_08011269.1| PP-loop family protein [Coprobacillus sp. 29_1]
gi|319808125|gb|EFW04697.1| PP-loop family protein [Coprobacillus sp. 29_1]
Length = 279
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 22/238 (9%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + ++IA+ SGGKDS ++A +L EL R + +L LS+D GY + + + ++
Sbjct: 32 MIQPNDKIAVCISGGKDSMLMAKLLQELKRHGKFDFELVFLSMD---PGYNEKNRKKIEE 88
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
N +P++ D++ ++V I K+ C C RR L A L +KIA
Sbjct: 89 NAEILDIPVQFFE-SDIF-----QVVTNIE-KSPCYLCARMRRGFLYAKAKELGCNKIAL 141
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ ET+L+ + G + L +T +G + +P EK+I+ + ++
Sbjct: 142 GHHIDDVVETILMGMFYGSQIQTMMPKLHSTNFEG-MELIRPMYLIEEKDII-HWCHYND 199
Query: 237 LDYFSTECIYSP----------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C ++ + R + IK LE + P ++ KS EN ++ T
Sbjct: 200 LAFIQCACRFTEEMEELGDVHHTSKREEMKNLIKYLETMNPNVKKNVFKSMENVKLGT 257
>gi|183598903|ref|ZP_02960396.1| hypothetical protein PROSTU_02339 [Providencia stuartii ATCC 25827]
gi|188021111|gb|EDU59151.1| PP-loop family protein [Providencia stuartii ATCC 25827]
Length = 304
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPISFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L N G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPEYLEN---LGIEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I YA K C PN R ++ ++D ++ P I + ++ +N
Sbjct: 191 IE-RYAQAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGRIETMFRATQN 243
>gi|386745255|ref|YP_006218434.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia stuartii
MRSN 2154]
gi|384481948|gb|AFH95743.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia stuartii
MRSN 2154]
Length = 304
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPISFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L N G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPEYLEN---LGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I YA K C PN R ++ ++D ++ P I + ++ +N
Sbjct: 191 IE-RYAQAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGRIETMFRATQN 243
>gi|218134226|ref|ZP_03463030.1| hypothetical protein BACPEC_02116 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991601|gb|EEC57607.1| PP-loop family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 376
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 22/283 (7%)
Query: 21 QRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFV 80
++K A+ K +EQ R+ F + + + I +L K G+RIA+ SGGKDS ++A +
Sbjct: 96 KQKQAMDFAKDVEQSIRKKFRKSIWCKFTKAINQYELVKKGDRIAVCISGGKDSMLMAKL 155
Query: 81 LSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDE 140
EL + + ++ + +D GY ++ + ++ N +P+ I D++ E
Sbjct: 156 FQELKIHNKFPFEVKFIVMD---PGYSPENRKVIEDNARNLNIPITIFE-SDIF-----E 206
Query: 141 IVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLS 200
V I K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G +
Sbjct: 207 SVYHIE-KSPCYLCARMRRGHLYSYAKELGCNKIALGHHYDDVIETILMGMLYGAQIQTM 265
Query: 201 RCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------A 250
L +T +G + +P E +I + + L + C ++ +
Sbjct: 266 MPKLHSTNFEG-MELIRPLYLVREDDIK-AWRDYNNLHFIQCACKFTDTCTTCNNNENRS 323
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
R +E I+ L+ + P +I KS EN I T ++G
Sbjct: 324 KRVEVKELIRSLKEVNPFVEGNIFKSVENVNIDTVVGYKQKGV 366
>gi|290769934|gb|ADD61703.1| putative protein [uncultured organism]
Length = 393
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 23/288 (7%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
S + +A +R K +E R+ F++ + I +L K G++IA+ SGGKDS +
Sbjct: 108 SEETENEAMEQRRKDIELSIRKKFHKQLFSRFARGINDYELVKPGDKIAVCISGGKDSML 167
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
+A + EL R + + +L L +D GY + + ++ N G+P+ + +
Sbjct: 168 MAKLFQELKRHNKFPFELVFLVMD---PGYNEANRAVIEHNAKLLGIPITVFETE----- 219
Query: 137 TMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDI 196
D + V K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G
Sbjct: 220 IFDAVYNV--EKSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQ 277
Query: 197 ARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY---------- 246
+ L +T +G + +P E +I Y L + C +
Sbjct: 278 VQTMMPKLHSTNFEG-MQLIRPMYLIREADIKHWRDY-NDLHFIQCACKFTDTCTTCRTD 335
Query: 247 -SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ + R + I +L+++ P +I +S EN + T + G
Sbjct: 336 GTSVSKRMEIKNLIAELKKVNPHIESNIFRSVENVNLHTVIAYKKDGV 383
>gi|116748162|ref|YP_844849.1| PP-loop domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697226|gb|ABK16414.1| PP-loop domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 310
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 17/307 (5%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER--IAIGASG 70
G C+ C +A ++ P C ECF + F + + + + F R + + SG
Sbjct: 11 GAKCTRCKA-QATIRLPHHHAIFCSECFLQFFRNAVAKAL---KKFGTTPRTPLLVAVSG 66
Query: 71 GKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI-SGYRDDSLQTVKRNEIQYGLPLKIVS 129
GKDS + VL +L G + L ID GI +G+ S + ++R LP S
Sbjct: 67 GKDSLAMWNVLRDL------GYETKGLHIDLGIEAGFSRASAEAIERFASPRNLPWVTYS 120
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
K+ G+++ +I + + C+ CG +RQ L+R +A GHN DD A +L
Sbjct: 121 LKETIGYSITDIRRKTR-RKICSVCGFLKRQMLNRLTIREDYRALAVGHNLDDEAGRLLG 179
Query: 190 NILRGDIARLSRCTLITTGEDGPIP-RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP 248
NI+R + + +P R KP Y E + + Y + C S
Sbjct: 180 NIVRHRTRYFEKQYPYLPSDHPRLPARLKPL-YRLEADEIRIYCAETGIMPLDDRCPLSR 238
Query: 249 NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
A +E + LE P D + S R S P+ G+C RCG + C
Sbjct: 239 GATSHMFKEALDFLEDRMPGTKRDFLFSFLKKREQPSLD-PDIGSCTRCGEPCYGETCSV 297
Query: 309 CVLLEGL 315
C LL L
Sbjct: 298 CRLLNQL 304
>gi|347524189|ref|YP_004781759.1| PP-loop domain containing protein [Pyrolobus fumarii 1A]
gi|343461071|gb|AEM39507.1| PP-loop domain protein [Pyrolobus fumarii 1A]
Length = 308
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 17/285 (5%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+CR + E F + + +L R+ +G SGGKDS L L+ ++R G D+
Sbjct: 29 LCRRHYIEAFRRRVRDALRKAKL--KPRRVIVGVSGGKDSVALLDALAWVSRHE--GFDV 84
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW----TMDEIVKVIGLKNN 150
++ID I Y +L+ V G+P IV +++ G + + I +
Sbjct: 85 VGVTIDLHIPEYSRHALRVVVDVYNSVGVPYVIVDSREVLGVDTNCASEAYINNIVRRPT 144
Query: 151 CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGED 210
C CG +R+ L+ A L D IATGH DD+ L+N+ G ++ GE
Sbjct: 145 CALCGSIKRRILEEVAHALGADAIATGHTLDDLTAFTLVNMASGQ--EDEGFAVVEKGEQ 202
Query: 211 GPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAI 270
+ R +P E++ + Y + L + T C + P A + R R +I
Sbjct: 203 --LMRLRPLLLVGERDTL-NYVIARGLPFTETPCPFKPTRSLSSAMKAAAGSLRSRYPSI 259
Query: 271 LDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
+ + +R+ S P++ C CG S C C L L
Sbjct: 260 IGNLLRLAYYRVKPSA--PQR--CVYCGSPSQSMVCFTCRLTSTL 300
>gi|118594050|ref|ZP_01551397.1| hypothetical protein MB2181_00240 [Methylophilales bacterium
HTCC2181]
gi|118439828|gb|EAV46455.1| hypothetical protein MB2181_00240 [Methylophilales bacterium
HTCC2181]
Length = 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I + + G+++ + SGGKDS L +L L ++ ++ +++D+ G+ +D
Sbjct: 27 KAIAHFNMIEDGDKVMVCVSGGKDSFTLLTILLALQKKAPINFEVIAMNLDQKQPGFPED 86
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + +YG+P +IV+ D Y ++I + K C+ C RR + + A +
Sbjct: 87 VLPNYFK---KYGIPFEIVN-ADTYSIVKEKIPEG---KTTCSLCSRLRRGIIYKKAKAI 139
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+KIA GH+ +DI ET LN+ G + L++ +D I R P + EK+IM
Sbjct: 140 GANKIALGHHKNDIVETFFLNMFHGSKLKAMPPKLLSDDKDNIIIR--PLAFCEEKDIM- 196
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
TYA C N R + + D ++ P + +I + N +S
Sbjct: 197 TYANTMNFPIIPCNLCGSQENLERKKIKAMLFDWDKANPGRVNNIFGAISNIELS 251
>gi|306820973|ref|ZP_07454593.1| PP-loop family protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551087|gb|EFM39058.1| PP-loop family protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 285
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 19/273 (6%)
Query: 12 GGRLCST--CNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
GG C T NQ K++L K I ++ E++ + + I +L G+RIA+ S
Sbjct: 4 GGNFCKTLEVNQNKSSLDEIK--RSIIKKYRKEIWNK-FTKAIRNYKLVNEGDRIAVAIS 60
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS ++A + EL N D + +D GY D + ++ N +P+KI
Sbjct: 61 GGKDSMLMAKLFQELKEHGNVNFDAEFVVMD---PGYHKDIRKLLEENCKYLEIPIKIFD 117
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
D++ I I C C RR AL A LK +K+A GH+ +D+ ET +L
Sbjct: 118 -TDVFA-----IADKIAGDYPCYMCAKMRRGALYNIAEQLKCNKLALGHHFNDVIETTML 171
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN 249
N+L + L + D I +P EK I+ Y L + C+ +
Sbjct: 172 NVLYAGSYKTMLPKLKSKNFDS-IELIRPLFLIEEKSII-KYTQNAGLHMLNCACMIAAK 229
Query: 250 ---AYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ R +E I++++R P +I S +N
Sbjct: 230 KTGSKRYEVKELIENMKRTNPNVDKNIFASAQN 262
>gi|260587727|ref|ZP_05853640.1| PP-loop family protein [Blautia hansenii DSM 20583]
gi|260541992|gb|EEX22561.1| PP-loop family protein [Blautia hansenii DSM 20583]
Length = 386
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 27 KRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR 86
+R +E+ R+ F++ + I +L K G++IA+ SGGKDS ++A + EL +
Sbjct: 103 ERYPEIEKSIRKKFHKTIFSRFTKAINEYELVKEGDKIAVCISGGKDSMLMAKLFQELQK 162
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIG 146
D+ L +D GY + + + ++ N +P+ I + + E V I
Sbjct: 163 HRKVNFDVIFLVMD---PGYNETNRKVIEENARLLNIPITI------FETNIFETVYEIE 213
Query: 147 LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT 206
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +
Sbjct: 214 -KSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQIQTMMPKLHS 272
Query: 207 TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----------SPNAYRGFA 255
T +G + +P E +I Y L + C + S + R
Sbjct: 273 TNFEG-MELIRPMYLIREDDIKHWRDY-NDLHFIQCACRFTDTCTTCREDGSTGSKRMEI 330
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ IK+L+ + P +I KS EN +ST E G
Sbjct: 331 KGLIKELKEINPFIEGNIFKSVENVNLSTVIAYKENGV 368
>gi|422008459|ref|ZP_16355443.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia rettgeri
Dmel1]
gi|414094932|gb|EKT56595.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia rettgeri
Dmel1]
Length = 304
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPIQFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L N G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPAYLDN---LGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTMFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
I +A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 191 IE-RFAQAKEFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRATQNI 244
>gi|238923740|ref|YP_002937256.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Eubacterium rectale ATCC 33656]
gi|238875415|gb|ACR75122.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Eubacterium rectale ATCC 33656]
gi|291525722|emb|CBK91309.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Eubacterium rectale DSM 17629]
Length = 377
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 22/271 (8%)
Query: 32 LEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYG 91
+EQ R+ F + + + I +L K G++IA+ SGGKDS ++A + EL + +
Sbjct: 108 VEQSIRKKFKKSIWRKFTKAINTYELVKPGDKIAVCISGGKDSMLMAKLFQELKHHNKFD 167
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNC 151
D+ L +D GY + + ++ N G+P I D++ D K+ C
Sbjct: 168 FDVKFLVMD---PGYNEANRHVIEENCRNLGIPATIFE-SDIFDAVYD------IEKSPC 217
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +T +G
Sbjct: 218 YLCARMRRGHLYAFAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLHSTNFEG 277
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------AYRGFAREFIKD 261
+ +P E +I + + L + C ++ + R ++ I +
Sbjct: 278 -MELIRPLYLVREDDIK-AWRDYNGLHFIQCACKFTDTCTTCNNEENRSKRVEIKQLIAN 335
Query: 262 LERLRPRAILDIIKSGENFRISTSTKMPEQG 292
L+++ P +I KS EN ++T + G
Sbjct: 336 LKKVNPFVEANIFKSVENVNLATVVAYKKDG 366
>gi|226330282|ref|ZP_03805800.1| hypothetical protein PROPEN_04195 [Proteus penneri ATCC 35198]
gi|225201077|gb|EEG83431.1| PP-loop family protein [Proteus penneri ATCC 35198]
Length = 307
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G++I + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDKIMVCLSGGKDSYTLLSILMNLQKSAPINFSLIAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L NE+ G+ KIV ++ YG D I + K C+ C RR L R A
Sbjct: 80 PEHILPEY-LNEL--GVEYKIVE-ENTYGIVKDIIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI ET+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILETLFLNMFYG--GKLKGMPPKLMSDDGKQIVIRPLAYAREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
I +A K+ C PN R +E ++D ++ P I + ++ +N
Sbjct: 191 IE-RFAQAKQFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRATQNI 244
>gi|291528152|emb|CBK93738.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Eubacterium rectale M104/1]
Length = 377
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 22/271 (8%)
Query: 32 LEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYG 91
+EQ R+ F + + + I +L K G++IA+ SGGKDS ++A + EL + +
Sbjct: 108 VEQSIRKKFKKSIWRKFTKAINTYELVKPGDKIAVCISGGKDSMLMAKLFQELKHHNKFD 167
Query: 92 LDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNC 151
D+ L +D GY + + ++ N G+P I D++ D K+ C
Sbjct: 168 FDVKFLVMD---PGYNEANRHVIEENCRNLGIPATIFE-SDIFDAVYD------IEKSPC 217
Query: 152 TFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDG 211
C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +T +G
Sbjct: 218 YLCARMRRGHLYAFAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLHSTNFEG 277
Query: 212 PIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------AYRGFAREFIKD 261
+ +P E +I + + L + C ++ + R ++ I +
Sbjct: 278 -MELIRPLYLVREDDIK-AWRDYNGLHFIQCACKFTDTCTTCNNEENRSKRVEIKQLIAN 335
Query: 262 LERLRPRAILDIIKSGENFRISTSTKMPEQG 292
L+++ P +I KS EN ++T + G
Sbjct: 336 LKKVNPFVEANIFKSVENVNLATVVAYKKDG 366
>gi|229828920|ref|ZP_04454989.1| hypothetical protein GCWU000342_01005 [Shuttleworthia satelles DSM
14600]
gi|229792083|gb|EEP28197.1| hypothetical protein GCWU000342_01005 [Shuttleworthia satelles DSM
14600]
Length = 484
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 25/249 (10%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNR--RHNYGLDLFLLSIDEGISGYRDDSLQTV 114
+ + G++IA+ SGGKDS ++A + EL R + N+ L+ L++ GY +++ + +
Sbjct: 224 MIQDGDKIAVCISGGKDSMIMAKLFQELLRHGKQNFSLEFLLMN-----PGYNEENYRRI 278
Query: 115 KRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI 174
N G+P+++ + ++ +IV ++N C C RR L A L +KI
Sbjct: 279 TDNARLLGIPIRV------FESSIYDIVAGEEIENPCYLCARMRRGHLYAKARELGCNKI 332
Query: 175 ATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
A GH+ DD+ ET+L+ +L G + + +T G + +P E +I+ +A +
Sbjct: 333 ALGHHFDDVIETILMGMLYGGQIQTMMPKVHSTNFQG-MELIRPLYLVREADIIH-WARY 390
Query: 235 KRLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C + + + R + I++L++ P +I +S EN + T
Sbjct: 391 NDLRFILCACRLTDSCSVVGGAETGSKRAEIKALIRELKKTNPYVEKNIFRSVENVNLQT 450
Query: 285 STKMPEQGT 293
EQG
Sbjct: 451 VIAYKEQGV 459
>gi|224542853|ref|ZP_03683392.1| hypothetical protein CATMIT_02045 [Catenibacterium mitsuokai DSM
15897]
gi|224524228|gb|EEF93333.1| PP-loop family protein [Catenibacterium mitsuokai DSM 15897]
Length = 289
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L + G++IA+ SGGKDS +LA +L EL R + DL + +D GY + + ++
Sbjct: 41 ELIEPGDKIAVCISGGKDSMLLAKLLQELQRHGKFHFDLEFICMD---PGYNPANRKLIE 97
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + G+P++ Y + +V I KN C C RR L A L +KIA
Sbjct: 98 ENAEKLGIPIQ------FYESDIFNVVHGIE-KNPCYLCARMRRGFLYNRAQELGCNKIA 150
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ D+ ET+L+ ++ G + L + G + +P +E++I+ +A
Sbjct: 151 LGHHYSDVIETILMGMMYGAQIQTMMPKLHSKNFKG-MELIRPMYLIHEEDII-AWAEKF 208
Query: 236 RLDYFSTECIYSP----------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C ++ + R + IK L + P+ +I KS EN + T
Sbjct: 209 NLKFLQCACRFTEESEARGEIEHTSKRAETKMLIKKLREINPKVEQNIFKSVENVNLKT 267
>gi|224146018|ref|XP_002336280.1| predicted protein [Populus trichocarpa]
gi|222833681|gb|EEE72158.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 33 EQICRECFYEVFEEEIHQVI-------VGN-QLFKAGERIAIGASGGKDSTVLAFVLSEL 84
+ +C E V E+++ Q I +G+ L + G+RI +G SGGKDS L +L L
Sbjct: 52 DHVCTEILLPVLEDKLFQRIKKLTGQAIGDFNLIEDGDRILVGVSGGKDSYTLLHILDRL 111
Query: 85 NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKV 144
RR +L +++D G G+R D + R ++G + V + D Y ++ +
Sbjct: 112 RRRAPIRYELVPVTVDSGYPGFRTDLIAEHLR---EHGFADR-VEHTDCYRIITEK--RR 165
Query: 145 IGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCT 203
G + C FC RR L A L +K+A GH+ DD+ ET+LLN G + +S
Sbjct: 166 PG-SSFCAFCARLRRGVLYSVADELGCNKLALGHHLDDVIETLLLNQFYIGTLGAMSPKL 224
Query: 204 LITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
L G I +P Y E +I+ F R + F C P R
Sbjct: 225 LADNGRHTVI---RPLVYVPEADII----EFARQNAFPLVCCSCPAHAR 266
>gi|289522928|ref|ZP_06439782.1| ATPase, PP-loop superfamily [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503952|gb|EFD25116.1| ATPase, PP-loop superfamily [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 299
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 21/310 (6%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P+ +C + F + + I ++F +I + SGGKDS
Sbjct: 3 CRICRE-KAIIGLPQHNLALCADHFDNWMLKRAAKAIDEFKMFTKDSKILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L +L+ L G + L I+ GI + Y ++S + + + G L +V+ K++
Sbjct: 62 ALWDILTRL------GYNAHGLYINLGIEENDYSNESEELSRTFANRIGKKLYVVNVKEI 115
Query: 134 YGWTMDEIVKVIGLK-NNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL 192
+G ++ + K K C+ CGV +R +++ A D I TGHN DD A +L N+L
Sbjct: 116 HGMSIPD--KAYSKKRKTCSVCGVTKRYYMNKTAREGNFDVIVTGHNLDDQAAALLGNLL 173
Query: 193 RGDIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAY 251
L++ + G + KP EKE Y + +DY EC YS A
Sbjct: 174 YWKFDYLAKGAPYSPPLWKGEFAKAKPLILCTEKENT-VYCLLQGIDYIQKECPYSEGAT 232
Query: 252 RGFAREFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCK 307
+ + ++E P A L +K + F+ + + MP+ CE C S + C
Sbjct: 233 FLRWKHILNEIEENSPGAKQAFYLGYVKYIDIFK-ARNIDMPDS-RCEICDTPSWNEVCS 290
Query: 308 ACVLLEGLNR 317
C L + LN+
Sbjct: 291 FCALWD-LNK 299
>gi|407789485|ref|ZP_11136586.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Gallaecimonas
xiamenensis 3-C-1]
gi|407206843|gb|EKE76793.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Gallaecimonas
xiamenensis 3-C-1]
Length = 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
+ Q I + + G+RI + SGGKDS L +L L DL +++D+ G+
Sbjct: 20 HVGQAISDFNMIEDGDRIMVCLSGGKDSYTLLDILMNLKASAPIHFDLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ IV+ +D Y + KV K C+ C RR L R A
Sbjct: 80 PEHVLPGYLE---ELGVEYLIVN-EDTYSIVKE---KVPEGKTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ LK K+A GH+ DDI ET+LLN+ G + L++ +DG +P Y EK+
Sbjct: 133 TELKCTKVALGHHRDDILETLLLNMFYGGKLKAMPPKLVS--DDGKHMVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I+ Y+ K C PN R +E +++ +R P I + K+ +N
Sbjct: 191 II-KYSEAKGFPIIPCNLCGSQPNLQRQVIKEMLQNWDRQFPGRIETMFKALQN 243
>gi|357053524|ref|ZP_09114616.1| hypothetical protein HMPREF9467_01588 [Clostridium clostridioforme
2_1_49FAA]
gi|355385150|gb|EHG32202.1| hypothetical protein HMPREF9467_01588 [Clostridium clostridioforme
2_1_49FAA]
Length = 290
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ K G+++A+ SGGKDS +LA L +L R+ +L + +D GY D+ + ++
Sbjct: 34 EMIKDGDKVAVCISGGKDSMLLAKCLQQLKRQSQTDFELEFIVMD---PGYNPDNRKLIE 90
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I D++ D +V V ++ C C RR L A L +KIA
Sbjct: 91 DNAALMNIPVRIFD-SDIF----DIVVDV--EQSPCYLCARMRRGYLYAHARELGCNKIA 143
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ IL G L +T G + +P Y E++I+ + +
Sbjct: 144 LGHHFDDVIETILMGILYGGQINTMMPKLHSTNFQG-MELIRPLYYVKEEDIL-AWKDYN 201
Query: 236 RLDYFSTEC-----IYSPNAYRGFA---------------REFIKDLERLRPRAILDIIK 275
L + C I A RG A +E I+ L + P +I+K
Sbjct: 202 GLHFLQCACRFTERIAKEQAARGMAGEASDIVHTSKRQEMKELIRSLRKTSPFIDANIMK 261
Query: 276 SGENFRIST 284
S EN +
Sbjct: 262 SVENINLDA 270
>gi|317497510|ref|ZP_07955829.1| rhodanese-like domain-containing protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895193|gb|EFV17356.1| rhodanese-like domain-containing protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 404
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
L R + +E+ R+ F++ + + I L + ++IAI SGGKDS ++A + EL
Sbjct: 126 LTRTQEIEKSIRKKFHKQIFSKFVKAIKTYDLVQENDKIAICISGGKDSMLMAKLFQELK 185
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
R + + DL L +D GY + + Q ++ N +P+ + D++ D + ++
Sbjct: 186 RHNKFHFDLVFLVMD---PGYNEMNRQIIENNAKLLDIPITVFE-SDIF----DAVYEI- 236
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L
Sbjct: 237 -EKSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLH 295
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS-------PN----AYRGF 254
+T +G + +P E +I Y L + C ++ P+ + R
Sbjct: 296 STNFEG-MELIRPMYLIREDDIKHWRDY-NGLHFIQCACKFTDTCTTCNPDGVTKSKRME 353
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRIST 284
++ I ++ + P +I KS EN + T
Sbjct: 354 TKQLIAKMKEINPYVESNIFKSVENVNLKT 383
>gi|291558374|emb|CBL37174.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [butyrate-producing bacterium SSC/2]
Length = 404
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
L R + +E+ R+ F++ + + I L + ++IAI SGGKDS ++A + EL
Sbjct: 126 LTRTQEIEKSIRKKFHKQIFSKFVKAIKTYDLVQENDKIAICISGGKDSMLMAKLFQELK 185
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
R + + DL L +D GY + + Q ++ N +P+ + D++ D + ++
Sbjct: 186 RHNKFHFDLVFLVMD---PGYNEMNRQIIENNAKLLDIPITVFE-SDIF----DAVYEI- 236
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L
Sbjct: 237 -EKSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLH 295
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS-------PN----AYRGF 254
+T +G + +P E +I Y L + C ++ P+ + R
Sbjct: 296 STNFEG-MELIRPMYLIREDDIKHWRDY-NGLHFIQCACKFTDTCTTCNPDGVTKSKRME 353
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRIST 284
++ I ++ + P +I KS EN + T
Sbjct: 354 TKQLIAKMKEINPYVESNIFKSVENVNLKT 383
>gi|338532922|ref|YP_004666256.1| hypothetical protein LILAB_16375 [Myxococcus fulvus HW-1]
gi|337259018|gb|AEI65178.1| hypothetical protein LILAB_16375 [Myxococcus fulvus HW-1]
Length = 280
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I ++L + G+RI +G SGGKDS + +L EL RR +L +++D+G G+ D
Sbjct: 17 RAIADHRLIEDGDRIMVGVSGGKDSYTMLHLLRELQRRAPVKFELLAVNLDQGHPGFPAD 76
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L++ + E G K++ +D Y ++ K K C+ C RR L A L
Sbjct: 77 KLESYFQRE---GYAYKLLK-EDTYSIVLE---KTPPGKTQCSVCSRMRRGILYTAAVEL 129
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DD+ T+LLN+ L + +DG +P Y EK+I
Sbjct: 130 GCTKIALGHHRDDLIHTLLLNLFFA--GSLKAMPPLLRSDDGRNVVIRPLCYAPEKDI-- 185
Query: 230 TYAYFKRLDYFST----ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
A F L F C N R + +++L + P ++ + N R
Sbjct: 186 --ARFAELMAFPIIPCDLCGTQENLQRKRMQRLVEELGKEIPNVRQSVLNAMANVR 239
>gi|325282320|ref|YP_004254861.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Deinococcus
proteolyticus MRP]
gi|324314129|gb|ADY25244.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Deinococcus
proteolyticus MRP]
Length = 292
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I ++ + G+RI + SGGKDS L VL L +R ++ +++D+G G+ D
Sbjct: 23 QAIGDYRMIEEGDRIMVCLSGGKDSYTLLDVLLHLQKRAPVRFEVVAVNLDQGQPGFPKD 82
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L R + G+P I++ +D Y ++I + K C+ C RR L A L
Sbjct: 83 VL---PRYLSELGVPHDILT-EDTYSVVKEKIPEG---KTTCSLCSRLRRGILYAHARRL 135
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ +N+ G ARL +DG +P Y E +I+
Sbjct: 136 GATKIALGHHRDDILETLFMNMFFG--ARLKAMPPKLQSDDGTNVVIRPLAYVPESQII- 192
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKS 276
YA + C N R E ++ ER P + +I++S
Sbjct: 193 AYAGARGFPIIPCNLCGSQENLQRKVVGEMLEGWEREHPGRLNNILRS 240
>gi|167766681|ref|ZP_02438734.1| hypothetical protein CLOSS21_01187 [Clostridium sp. SS2/1]
gi|429761193|ref|ZP_19293624.1| rhodanese-like protein [Anaerostipes hadrus DSM 3319]
gi|167711618|gb|EDS22197.1| rhodanese-like protein [Clostridium sp. SS2/1]
gi|429184334|gb|EKY25354.1| rhodanese-like protein [Anaerostipes hadrus DSM 3319]
Length = 438
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 26 LKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELN 85
L R + +E+ R+ F++ + + I L + ++IAI SGGKDS ++A + EL
Sbjct: 160 LTRTQEIEKSIRKKFHKQIFSKFVKAIKTYDLVQENDKIAICISGGKDSMLMAKLFQELK 219
Query: 86 RRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI 145
R + + DL L +D GY + + Q ++ N +P+ + D++ D + ++
Sbjct: 220 RHNKFHFDLVFLVMD---PGYNEMNRQIIENNAKLLDIPITVFE-SDIF----DAVYEI- 270
Query: 146 GLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLI 205
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L
Sbjct: 271 -EKSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLH 329
Query: 206 TTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYS-------PN----AYRGF 254
+T +G + +P E +I Y L + C ++ P+ + R
Sbjct: 330 STNFEG-MELIRPMYLIREDDIKHWRDY-NGLHFIQCACKFTDTCTTCNPDGVTKSKRME 387
Query: 255 AREFIKDLERLRPRAILDIIKSGENFRIST 284
++ I ++ + P +I KS EN + T
Sbjct: 388 TKQLIAKMKEINPYVESNIFKSVENVNLKT 417
>gi|302389237|ref|YP_003825058.1| PP-loop domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302199865|gb|ADL07435.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 247
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 21/248 (8%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
F + F ++ + I+ + + G++IA+G SGGKDST L ++L + + D+ ++I
Sbjct: 5 FGKWFLTKVKKAIIDYGMIENGDKIAVGVSGGKDSTTLLYILDLVRKHSPLDFDIVAVNI 64
Query: 100 DEGISGYRDD--SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVF 157
D G+ D L+ RN +PLK+V K + EI K N C+ C
Sbjct: 65 D---LGWEMDLTPLEDFCRN---LQIPLKVV--KTDIARVVFEIRKE---SNPCSLCSRM 113
Query: 158 RRQALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRC 216
RR LD A L +K+A H+ADD+ ET+LLN I G T ++ +
Sbjct: 114 RRGTLDSAAVELGCNKVALAHHADDVIETLLLNLIFTGRFDTFEPKTYLSRKN---VTLI 170
Query: 217 KPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRA---ILDI 273
+P Y E+ I T + L + C R E + +E++ PRA IL
Sbjct: 171 RPLIYLSERTIK-TIVKSRGLPVIESPCPADGRTKRDEMTELLDRMEQVFPRARENILAA 229
Query: 274 IKSGENFR 281
IK + FR
Sbjct: 230 IKRRDFFR 237
>gi|422022605|ref|ZP_16369112.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia sneebia
DSM 19967]
gi|414095775|gb|EKT57435.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia sneebia
DSM 19967]
Length = 304
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 EVGQAIADYNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPISFSLIAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L N G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPEYLDN---LGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
I ++ K C PN R ++ ++D ++ P I + ++ +N
Sbjct: 191 IE-RFSDAKSFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGRIETMFRATQNI 244
>gi|94985996|ref|YP_605360.1| C32 tRNA thiolase [Deinococcus geothermalis DSM 11300]
gi|205830577|sp|Q1IX43.1|TTCA_DEIGD RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|94556277|gb|ABF46191.1| tRNA s(2)C-32 sulfurtransferase [Deinococcus geothermalis DSM
11300]
Length = 289
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I ++ + G+R+ + SGGKDS L +L L +R ++ +++D+G G+
Sbjct: 20 QAITDYRMIEEGDRVMVCLSGGKDSYTLLDILLHLQKRAPIHFEVVAVNLDQGQPGFPK- 78
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
+ + G+P I++ +D Y + K K C C RR L R A +
Sbjct: 79 --HVLPEYLTRLGVPFDILT-EDTYSIVKE---KTPEGKTTCALCSRLRRGILYRHAREI 132
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ +N+ G ARL +DG +P Y E++I
Sbjct: 133 GATKIALGHHRDDILETLFMNMFFG--ARLKAMPPKLQSDDGTNVVIRPLAYLAERDIE- 189
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKS 276
YA K C PN R E ++ ER P + +I++S
Sbjct: 190 RYAQAKGFPIIPCNLCGSQPNLQRRVVGEMLEGWEREHPGRLQNILRS 237
>gi|451344229|ref|ZP_21913289.1| hypothetical protein HMPREF9943_01514 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449336943|gb|EMD16111.1| hypothetical protein HMPREF9943_01514 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 281
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL G+RI + SGGKDS +LA + EL R + + +D G + Y D ++
Sbjct: 31 QLINEGDRIMVCISGGKDSFLLAKCIQELQRHGKIHFEAHYVCMDPGYNQYNRDYIED-- 88
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N G+PL+I + + V KN C FC RR L + A L +KIA
Sbjct: 89 -NADDLGIPLEI------FETNIFNAVSSGDFKNPCYFCARMRRGYLYKQAQSLACNKIA 141
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET LL++ G + L + G I +P Y ++E + +
Sbjct: 142 LGHHFDDVIETTLLSMFYGSEIKTMMPKLHSENYKG-IELIRPL-YQVKEEAIIRWRDAN 199
Query: 236 RLDYFSTECIYSP--------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTK 287
L + + C ++ + R +EFIK + + P +I S N + K
Sbjct: 200 NLTFINCACRFTEGCSLINDGTSKRKVIKEFIKTMRKDNPHIDHNIFVSMHNVNLDCVIK 259
>gi|291549805|emb|CBL26067.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Ruminococcus torques L2-14]
Length = 388
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 141/317 (44%), Gaps = 37/317 (11%)
Query: 1 MEVAESKSKKA-------GGR---LCSTCNQRKAA-----LKRPKTLEQICRECFYEVFE 45
+EVAE+ +K GG L T Q++A + K +EQ R+ F +
Sbjct: 66 VEVAETLEEKGVDAVSLNGGYIAWLIDTMKQKEAEDAKEEVNFAKEVEQSLRKKFRKNIW 125
Query: 46 EEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISG 105
+ + I +L K G+RIA+ SGGKDS ++A + EL R + + ++ L +D G
Sbjct: 126 CKFTKAINEYELVKPGDRIAVCISGGKDSMLMAKLFQELKRHNKFDFEVKFLVMD---PG 182
Query: 106 YRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRG 165
Y + Q ++ N + +P++I D++ E V I K+ C C RR L
Sbjct: 183 YSPANRQVIEENARRLEIPIEIFE-SDIF-----ESVYNIE-KSPCYLCARMRRGYLYSH 235
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A + +KIA GH+ DD+ ET+L+ +L + L +T +G + +P E
Sbjct: 236 AQKMGCNKIALGHHYDDVIETILMGMLYSAQVQTMMPKLHSTNFEG-MELIRPLYMVRED 294
Query: 226 EIMFTYAYFKRLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIK 275
+I + + L + C ++ + R +E I L+++ P +I K
Sbjct: 295 DIK-AWRDYNDLHFIQCACKFTDTCTTCNNEENRSKRMEIKELIATLKKVNPYVEGNIFK 353
Query: 276 SGENFRISTSTKMPEQG 292
S EN + T +G
Sbjct: 354 SVENVNLDTVVAYKSKG 370
>gi|197301463|ref|ZP_03166543.1| hypothetical protein RUMLAC_00195 [Ruminococcus lactaris ATCC
29176]
gi|197299501|gb|EDY34021.1| PP-loop family protein [Ruminococcus lactaris ATCC 29176]
Length = 398
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 27/294 (9%)
Query: 15 LCSTCNQRKAALKR-----PKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGAS 69
L Q++AA K K +EQ R+ F + + + I +L K G++IA+ S
Sbjct: 107 LIDNMKQKEAAEKAGEGSFAKDVEQSLRKKFRKSIWCKFTKAINEYELVKPGDKIAVCIS 166
Query: 70 GGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVS 129
GGKDS ++A + EL R + + ++ L +D GY + Q ++ N + +P++I
Sbjct: 167 GGKDSMLMAKLFQELKRHNKFDFEVKFLVMD---PGYSPANRQVIEENAKRLEIPIEIFE 223
Query: 130 YKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLL 189
D++ + + V K+ C C RR L A + +KIA GH+ DD+ ET+L+
Sbjct: 224 -SDIF----ESVYNV--EKSPCYLCARMRRGYLYSHAQKMGCNKIALGHHYDDVIETILM 276
Query: 190 NILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP- 248
+L + L +T +G + +P Y ++ + + + L + C ++
Sbjct: 277 GMLYSAQFQTMMPKLHSTNFEG-MELIRPL-YLVREDAIKAWRDYNDLHFIQCACKFTDT 334
Query: 249 ---------NAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ R +E I L+++ P +I KS EN + T ++G
Sbjct: 335 CTTCNNEENQSKRMETKELIARLKKVNPYVEGNIFKSVENVNLDTIVAYKQKGV 388
>gi|290475465|ref|YP_003468353.1| hypothetical protein XBJ1_2463 [Xenorhabdus bovienii SS-2004]
gi|289174786|emb|CBJ81587.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 304
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I ++ + G+RI + SGGKDS L +L L + L +++D+ G+ +
Sbjct: 23 QAIADFKMIEEGDRIMVCLSGGKDSYTLLSILQNLQKSAPVNFSLVAVNLDQKQPGFPEH 82
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV ++ YG ++I + K C+ C RR L R A+ L
Sbjct: 83 ILPAYLE---ELGIEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTATEL 135
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI +TV LN+ G + LI+ +DG +P Y EK+I
Sbjct: 136 GATKIALGHHRDDILQTVFLNMFYGGKLKGMPPKLIS--DDGKHIVIRPLAYCREKDIE- 192
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA + C PN R ++ ++D ++ P I + ++ +N
Sbjct: 193 RYAEARAFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGRIETMFRAVQN 243
>gi|119774936|ref|YP_927676.1| C32 tRNA thiolase [Shewanella amazonensis SB2B]
gi|205830625|sp|A1S6K0.1|TTCA_SHEAM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|119767436|gb|ABM00007.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 19/301 (6%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ I + + G+R+ SGGKDS + +L L +R ++ +++D+ G+
Sbjct: 27 EVGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDILINLQQRAPVSFEIVAVNLDQKQPGF 86
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L G+P I+ KD Y D+I + K C+ C RR L A
Sbjct: 87 PEHVLPAYLET---LGVPFHILE-KDTYSIVKDKIPEG---KTTCSLCSRLRRGTLYGFA 139
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ KIA GH+ DDI ET+ LN+ G + L++ +DG +P Y EK+
Sbjct: 140 QRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLS--DDGANVVIRPLAYCREKD 197
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
I YA K+ C N R ++ +K +R P I I + +N
Sbjct: 198 IA-EYAELKQFPIIPCNLCGSQENLKRAAVKDMLKQWDRQHPGRIETIFTAMQN------ 250
Query: 286 TKMPEQGTC-ERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNKGT 344
P QG E+ ++S ++ A + LP + + + D + +GT
Sbjct: 251 -TAPSQGVDREQFDFVSLKQDPNAEFRGDVAEADLPAFDFMDTANSGHINLDDASKRQGT 309
Query: 345 K 345
+
Sbjct: 310 R 310
>gi|392551663|ref|ZP_10298800.1| hypothetical protein PspoU_10335 [Pseudoalteromonas spongiae
UST010723-006]
Length = 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS L +L L R +LF +++D+ G+ +
Sbjct: 26 QAIADFNMIEEGDRIMVCLSGGKDSYTLLDILQNLQRSAPVNFELFAINLDQKQPGFPEH 85
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D+I + K C+ C RR L R A +
Sbjct: 86 ILPEYLES---LGIEFKIVE-EDTYSIVKDKIPEG---KTTCSLCSRLRRGILYRTAKEM 138
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DD+ ET+ LN+ G +L +DG +P Y EK+I+
Sbjct: 139 GATKIALGHHRDDMIETMFLNMFYG--GKLKGMPAKLLSDDGQHMVIRPLAYCKEKDIV- 195
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA + C N R + + + ++ P + I S +N
Sbjct: 196 KYAEAREFPIIPCNLCGSQENLQRKHIKAMLNEWDKTHPGRVETIFTSMQN 246
>gi|422014487|ref|ZP_16361098.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
burhodogranariea DSM 19968]
gi|414100931|gb|EKT62540.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
burhodogranariea DSM 19968]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPISFSLIAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L N G+ KIV ++ Y D KV K C+ C RR L R A
Sbjct: 80 PEHILPEYLSN---LGVEYKIVE-ENTYAIVKD---KVPEGKTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTLFLNMFFG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I Y+ K C PN R ++ ++D ++ P I + ++ +N
Sbjct: 191 IE-RYSEAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGRIETMFRATQN 243
>gi|281345206|gb|EFB20790.1| hypothetical protein PANDA_020104 [Ailuropoda melanoleuca]
Length = 83
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 29 PKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRH 88
P++ + +C CF FE E+ ++ +L G +A+GASGGKDSTVLA VL EL R
Sbjct: 1 PRSGQALCGACFCTAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDSTVLAHVLRELTPR- 59
Query: 89 NYGLDLFLLSIDEGISGYRDDSL 111
G+ L L+++DEGI GYRD +L
Sbjct: 60 -LGVSLRLVAVDEGIGGYRDAAL 81
>gi|212712036|ref|ZP_03320164.1| hypothetical protein PROVALCAL_03112 [Providencia alcalifaciens DSM
30120]
gi|212685558|gb|EEB45086.1| hypothetical protein PROVALCAL_03112 [Providencia alcalifaciens DSM
30120]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQNLQKSAPISFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPAYLE---ELGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ + KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TEIGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I YA K C PN R +E ++D ++ P I + + +N
Sbjct: 191 IE-RYAKAKAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFSATQN 243
>gi|422348821|ref|ZP_16429713.1| hypothetical protein HMPREF9465_00603 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658873|gb|EKB31735.1| hypothetical protein HMPREF9465_00603 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 334
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+R+ + SGGKDS VL L L +R DL +++D+ I + +
Sbjct: 82 QAITDFGMIEDGDRVMVAMSGGKDSFVLLDALRTLQKRAPIKFDLVAVNVDQHIPNFPRE 141
Query: 110 SL-QTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASL 168
+L Q K +++Y + +D Y I + +N C+ C RR L R A
Sbjct: 142 ALEQYFKDIDVEYH-----IEDQDTYSIIQRLIPEG---RNVCSLCARLRRGILYRVAGE 193
Query: 169 LKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM 228
+K +KIA GH+ DDI T+LLN+ G R+ I +D +P Y E E
Sbjct: 194 MKCNKIALGHHMDDIVGTLLLNLFYG--GRMKAMPPILRSDDKRNVVIRPLAYVRESE-- 249
Query: 229 FTYAYFKRLDYFSTE---CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
T + K Y T C N R +E IK +R P I ++ S + R+S S
Sbjct: 250 -TEKFAKIRQYPLTSKGICGAGENLKRQEVKELIKAWDREFPGRIYNLFMSLQ--RVSPS 306
Query: 286 TKM 288
M
Sbjct: 307 HLM 309
>gi|405355819|ref|ZP_11024931.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Chondromyces apiculatus
DSM 436]
gi|397091091|gb|EJJ21918.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 280
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 19/237 (8%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I ++L + G+RI +G SGGKDS + +L EL RR +L +++D+G G+ D
Sbjct: 17 RAIADHRLIEDGDRIMVGVSGGKDSYTMLHLLRELQRRAPVKFELLAVNLDQGHPGFPAD 76
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L+ + E G K++ +D Y ++ K K C+ C RR L A L
Sbjct: 77 KLEAYFQRE---GYAYKLLK-EDTYSIVLE---KTPPGKTQCSVCSRMRRGILYTAAVEL 129
Query: 170 KVDKIATGHNADDIAETVLLNI-LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM 228
KIA GH+ DD+ T+LLN+ G I + + +DG +P Y EK+I
Sbjct: 130 GCTKIALGHHRDDLIHTLLLNLFFAGSIKAMPP---LLRSDDGRNVVIRPLCYAAEKDI- 185
Query: 229 FTYAYFKRLDYFST----ECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
A F L F C N R + +++L + P ++ + N R
Sbjct: 186 ---AKFAELMQFPIIPCDLCGTQENLQRKRMQRLMEELGKEIPNVRQSVLNAMANVR 239
>gi|160940060|ref|ZP_02087405.1| hypothetical protein CLOBOL_04949 [Clostridium bolteae ATCC
BAA-613]
gi|158436640|gb|EDP14407.1| hypothetical protein CLOBOL_04949 [Clostridium bolteae ATCC
BAA-613]
Length = 290
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 30/248 (12%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ K G+++A+ SGGKDS +LA L +L R+ +L + +D GY D+ ++
Sbjct: 34 EMIKDGDKVAVCISGGKDSMLLAKCLQQLKRQSRTDFELEFIVMD---PGYNPDNRNLIE 90
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I D++ D +V V ++ C C RR L A L +KIA
Sbjct: 91 DNAALMNIPVRIFD-SDIF----DIVVDV--EQSPCYLCARMRRGYLYAHARELGCNKIA 143
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM----FTY 231
GH+ DD+ ET+L+ IL G L +T G + +P Y E++I+ +
Sbjct: 144 LGHHFDDVIETILMGILYGGQINTMMPKLHSTNFQG-MELIRPLYYVKEEDILDWKDYNG 202
Query: 232 AYFKRLDYFSTECIYSPNAYRGFA---------------REFIKDLERLRPRAILDIIKS 276
+F + TE I A RG A +E I+ L + P +I+KS
Sbjct: 203 LHFLQCACRFTERIAKEQAARGMAGEAADIVHTSKRQEMKELIRSLRKTSPFIDANIMKS 262
Query: 277 GENFRIST 284
EN +
Sbjct: 263 VENINLDA 270
>gi|422018357|ref|ZP_16364914.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
alcalifaciens Dmel2]
gi|414104649|gb|EKT66214.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
alcalifaciens Dmel2]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPISFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPAYLE---ELGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ + KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TEIGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I YA K C PN R +E ++D ++ P I + + +N
Sbjct: 191 IE-RYAKAKAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFSATQN 243
>gi|289596443|ref|YP_003483139.1| PP-loop domain protein [Aciduliprofundum boonei T469]
gi|289534230|gb|ADD08577.1| PP-loop domain protein [Aciduliprofundum boonei T469]
Length = 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLD 93
+C+E F +FE I +V+ + +K +IAI SGGKDS VL +E + D
Sbjct: 18 NLCKEDFNRLFERRIEKVL---KKYKPEGKIAIALSGGKDSMVLLHYFAERD------YD 68
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTF 153
+F I+ GI + D + V+ +YG+ L + + ++ YG+ ++ + + C+
Sbjct: 69 IFGYFINLGIGEHSDKMEKLVRNACKEYGVELIVTNLREEYGFGIENV-----RRKPCSA 123
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP- 212
CG +R +++ + TGHN DD + N L + + +R + + P
Sbjct: 124 CGTVKRYLMNKVPRENGASVVTTGHNMDDFLDFFFKNTLAKNY-QWNRNMVPYLPSEHPK 182
Query: 213 -IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP-NAYRGFAREFIKDLERLRPRAI 270
+P+ +P +KEI YA + Y S +C + + ++ E + + R + I
Sbjct: 183 MLPKIRPLYLLGDKEIG-MYAKLNNVPYSSDKCPLAKFSGWKEIFYEIEAEKKNFRYQMI 241
Query: 271 LDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
L I + + F + E C++CG +S + C C L
Sbjct: 242 LSIWEMADFF----PEERRELRECKKCGEPTSGEICAFCKL 278
>gi|206890224|ref|YP_002248861.1| ATPase, PP-loop superfamily [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742162|gb|ACI21219.1| ATPase, PP-loop superfamily [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 17/304 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C+ C K L ++C ECF F++ + + I ++F + I I SGGKDS
Sbjct: 8 CNFCGFLKKGLVLKHYNLKVCLECFPAFFKKRVQETIEKFKMFSKKDSILIAVSGGKDS- 66
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+S L + ++ L ID GI S + V+ + + LK + ++
Sbjct: 67 -----MSILKALKDMEYNIKALHIDVGIGEVSKKSKEFVQEFCEKEDISLKTIKLQEEIQ 121
Query: 136 WTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
+ E+ K I + C CG+ RR L+R +S I TGH +D +L N++ +
Sbjct: 122 LPLKELSK-ISKRPICAVCGMLRRYILNRESS---GQTIVTGHTLNDEVAFILKNMIFWN 177
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
L+R + ++G + KP E+E F + + Y C Y Y F
Sbjct: 178 DELLARIYPVLHEKEGFSRKVKPLCLITEEETRF-FCETLSIKYIDEPCPYKSEVYELF- 235
Query: 256 REFIKDLERLRPRAILDI----IKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
++ + ++ P +I+ +K + F + Q +C+ CGY++ + C C L
Sbjct: 236 KKVVYEINYDFPGSIIGFYKGYLKRAKRFYPENINNISLQ-SCKNCGYMTISELCSICRL 294
Query: 312 LEGL 315
E L
Sbjct: 295 KEKL 298
>gi|254166581|ref|ZP_04873435.1| hypothetical protein ABOONEI_1673 [Aciduliprofundum boonei T469]
gi|197624191|gb|EDY36752.1| hypothetical protein ABOONEI_1673 [Aciduliprofundum boonei T469]
Length = 272
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLD 93
+C+E F +FE I +V+ + +K +IAI SGGKDS VL +E + D
Sbjct: 2 NLCKEDFNRLFERRIEKVL---KKYKPEGKIAIALSGGKDSMVLLHYFAERD------YD 52
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTF 153
+F I+ GI + D + V+ +YG+ L + + ++ YG+ ++ + + C+
Sbjct: 53 IFGYFINLGIGEHSDKMEKLVRNACKEYGVELIVTNLREEYGFGIENV-----RRKPCSA 107
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP- 212
CG +R +++ + TGHN DD + N L + + +R + + P
Sbjct: 108 CGTVKRYLMNKVPRENGASVVTTGHNMDDFLDFFFKNTLAKNY-QWNRNMVPYLPSEHPK 166
Query: 213 -IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSP-NAYRGFAREFIKDLERLRPRAI 270
+P+ +P +KEI YA + Y S +C + + ++ E + + R + I
Sbjct: 167 MLPKIRPLYLLGDKEIG-MYAKLNNVPYSSDKCPLAKFSGWKEIFYEIEAEKKNFRYQMI 225
Query: 271 LDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
L I + + F + E C++CG +S + C C L
Sbjct: 226 LSIWEMADFF----PEERRELRECKKCGEPTSGEICAFCKL 262
>gi|160878340|ref|YP_001557308.1| PP-loop domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160427006|gb|ABX40569.1| PP-loop domain protein [Clostridium phytofermentans ISDg]
Length = 288
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G++IA+ SGGKDS +LA + EL + +L L +D GY + + QT+
Sbjct: 31 ELIKEGDKIAVCISGGKDSMLLAKCMQELQKHGKIPFELVFLVMD---PGYNEINRQTII 87
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I + + +IV + ++ C C RR L + A +KIA
Sbjct: 88 NNAKLLNIPIEI------FESNIFDIVAEVD-ESPCYLCARMRRGYLYKNAKAHGCNKIA 140
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L + L +T +G + +P Y E I+ + F
Sbjct: 141 LGHHFDDVIETILMGMLYSGQIQTMMPKLHSTNFEG-MELIRPMYYVKEDAILH-WKQFH 198
Query: 236 RLDY------FSTECIYSPNAYRGFAREFIKDL-ERLRPRA-ILD--IIKSGENFRISTS 285
L + F+ C N G R+ +K L ++ R ++ I+D I +S EN + T
Sbjct: 199 ELQFIQCACRFTENCTLCDNGGGGSKRQEMKALVKKFRSQSNIIDSNIFRSVENVNLDTV 258
Query: 286 TKMPEQGT 293
+GT
Sbjct: 259 IAYKTKGT 266
>gi|268592643|ref|ZP_06126864.1| PP-loop family protein [Providencia rettgeri DSM 1131]
gi|291311783|gb|EFE52236.1| PP-loop family protein [Providencia rettgeri DSM 1131]
Length = 304
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLSILQSLQKSAPIQFSLIAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPAYLD---KLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTMFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
I +A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 191 IE-RFAQAKDFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRATQNI 244
>gi|331083984|ref|ZP_08333091.1| hypothetical protein HMPREF0992_02015 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402346|gb|EGG81916.1| hypothetical protein HMPREF0992_02015 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 386
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 23/277 (8%)
Query: 27 KRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR 86
+R +E+ R+ F++ + I +L K G++IA+ SGGKDS ++A + EL +
Sbjct: 103 ERYPEIEKSIRKKFHKTIFSRFTKAINEYELVKEGDKIAVCISGGKDSMLMAKLFQELQK 162
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIG 146
D+ L +D GY + + + ++ N +P+ I + + E V I
Sbjct: 163 HRKVNFDVVFLVMD---PGYNETNRKVIEENARLLNIPITI------FETNIFETVYEIE 213
Query: 147 LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT 206
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +
Sbjct: 214 -KSPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQIQTMMPKLHS 272
Query: 207 TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIY-----------SPNAYRGFA 255
T + + +P E +I Y L + C + S + R
Sbjct: 273 TNFEA-MELIRPMYLIREDDIKHWRDY-NDLHFIQCACRFTDTCTTCREDGSTGSKRMEI 330
Query: 256 REFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
+ IK+L+ + P +I KS EN +ST E G
Sbjct: 331 KGLIKELKEINPFIEGNIFKSVENVNLSTVIAYKENG 367
>gi|254167304|ref|ZP_04874156.1| hypothetical protein ABOONEI_2117 [Aciduliprofundum boonei T469]
gi|197623567|gb|EDY36130.1| hypothetical protein ABOONEI_2117 [Aciduliprofundum boonei T469]
Length = 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 29/284 (10%)
Query: 34 QICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLD 93
+C+E F +FE I +V+ + +K +IAI SGGKDS VL +E + D
Sbjct: 18 NLCKEDFNRLFERRIEKVL---KKYKPEGKIAIALSGGKDSMVLLHYFAERD------YD 68
Query: 94 LFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTF 153
+F I+ GI + D + V+ +YG+ L + + ++ YG+ ++ + + C+
Sbjct: 69 IFGYFINLGIGEHSDKMEKLVRNACKEYGVELIVTNLREEYGFGIEGV-----RRKPCSV 123
Query: 154 CGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP- 212
CG +R +++ +ATGHN DD + N L + + +R + P
Sbjct: 124 CGTVKRYLMNKVPRENGAKLVATGHNMDDFLDFFFKNTLAKNY-QWNRNMVPYLPSTHPK 182
Query: 213 -IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE----RLRP 267
+P+ +P +KEI YA + Y S +C P A +E ++E R
Sbjct: 183 MLPKIRPLYLLGDKEIE-MYAKLNNVPYSSDKC---PLAKFSGWKEIFYEIEGKKRNFRY 238
Query: 268 RAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
+ IL I + F + E C++CG +S + C C L
Sbjct: 239 QMILSIWDMADFF----PEERRELQECKKCGEPTSGEICAFCKL 278
>gi|291460401|ref|ZP_06599791.1| PP-loop family protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291416968|gb|EFE90687.1| PP-loop family protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 387
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L + G+RI + SGGKDS ++A + E+ R + + +L L +D GY + + + ++
Sbjct: 137 ELVEEGDRICVCISGGKDSMLMAKLFQEVKRHNKFPFELVFLCMD---PGYNEANRRIIE 193
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N G+PL+ + D + + K+ C C RR L R A L +KIA
Sbjct: 194 ENAALLGIPLRFFQTE-----IFDAVFHI--EKSPCYVCARMRRGWLYRRARELGCNKIA 246
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ETVL+ +L + L +T +G + +P Y +E + +
Sbjct: 247 LGHHYDDVIETVLMGMLYSGQFQAMMPKLRSTNFEG-MELIRPL-YLIREEDILRWRDEN 304
Query: 236 RLDYFSTECIY-----------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L++ C + + ++ R + I L+R P ++ KS EN ++T
Sbjct: 305 HLNFIQCACKFTESCSSCQTDGTSSSKRLETKRLIASLKRTNPFIEKNLFKSMENVSLNT 364
Query: 285 STKMPEQGT 293
+ E G
Sbjct: 365 VLAVRENGV 373
>gi|153814901|ref|ZP_01967569.1| hypothetical protein RUMTOR_01116 [Ruminococcus torques ATCC 27756]
gi|145847932|gb|EDK24850.1| PP-loop family protein [Ruminococcus torques ATCC 27756]
Length = 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+ IA+G SGGKDS L + L L R + DL +++D G + + + +Q + R
Sbjct: 25 MIQEGDHIAVGISGGKDSLTLLYALHGLKRFYPRKFDLSAVTVDLGFADFNLEPIQNLCR 84
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ +P KIV D+Y D + V N C+ C R+ AL+ + +K+A
Sbjct: 85 ---ELEVPYKIVK-SDIY----DILFNVRQESNPCSLCAKMRKGALNEAVKEMGCNKVAY 136
Query: 177 GHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM-FTYAYF 234
H+ DDI ET+LL+ I G S T + + + +P + E E++ F Y
Sbjct: 137 AHHKDDIIETMLLSLIFEGRFYSFSPKTYLDRMD---LTVIRPMMFIDEMEVIGFRNKY- 192
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
L +C + R +A+E +++L + P
Sbjct: 193 -SLPVVKGKCPVDGHTKRQYAKELLRELNKEHP 224
>gi|444377410|ref|ZP_21176641.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Enterovibrio sp. AK16]
gi|443678491|gb|ELT85160.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Enterovibrio sp. AK16]
Length = 308
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+
Sbjct: 25 VGQAIADFNMIEDGDRIMVCLSGGKDSYTMLEILQSLQKSAPISFELIAVNLDQKQPGFP 84
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L G+ KIV +D Y D KV K C+ C RR L R A
Sbjct: 85 EHVLPEYLDG---LGVEYKIVE-EDTYSIVKD---KVPEGKTTCSLCSRLRRGILYRTAK 137
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I
Sbjct: 138 ELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDI 195
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA C PN R +E ++D +R P I + ++ +N
Sbjct: 196 E-RYAEAAEFPIIPCNLCGSQPNLQRQVIKEMLRDWDRRFPGRIETMFRAMQN 247
>gi|417359084|ref|YP_002933336.2| PP-loop family protein [Edwardsiella ictaluri 93-146]
gi|409033251|gb|ACR69101.2| PP-loop family protein [Edwardsiella ictaluri 93-146]
Length = 311
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRVMVCLSGGKDSYTMLEILRNLQQSAPVDFTLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L N+ G+ +IV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 ETVLPAYLENQ---GIEYRIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAN 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L +KIA GH+ DD+ ET+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELHCNKIALGHHRDDMLETLFLNMFYG--GKLKGMPPKLMSDDGQHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 197 E-RFAAAKAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRAMQN 248
>gi|317500413|ref|ZP_07958637.1| PP-loop family protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089580|ref|ZP_08338479.1| hypothetical protein HMPREF1025_02062 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438896|ref|ZP_08618517.1| hypothetical protein HMPREF0990_00911 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898168|gb|EFV20215.1| PP-loop family protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|330404948|gb|EGG84486.1| hypothetical protein HMPREF1025_02062 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017386|gb|EGN47148.1| hypothetical protein HMPREF0990_00911 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 244
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+ IA+G SGGKDS L + L L R + DL +++D G + + + +Q + R
Sbjct: 19 MIQEGDHIAVGISGGKDSLTLLYALHGLKRFYPRKFDLSAVTVDLGFADFNLEPIQNLCR 78
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ +P KIV D+Y D + V N C+ C R+ AL+ + +K+A
Sbjct: 79 ---ELEVPYKIVK-SDIY----DILFNVRQESNPCSLCAKMRKGALNEAVKEMGCNKVAY 130
Query: 177 GHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM-FTYAYF 234
H+ DDI ET+LL+ I G S T + + + +P + E E++ F Y
Sbjct: 131 AHHKDDIIETMLLSLIFEGRFYSFSPKTYLDRMD---LTVIRPMMFIDEMEVIGFRNKY- 186
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
L +C + R +A+E +++L + P
Sbjct: 187 -SLPVVKGKCPVDGHTKRQYAKELLRELNKEHP 218
>gi|392407269|ref|YP_006443877.1| ATPase of the PP-loop superfamily implicated in cell cycle control
[Anaerobaculum mobile DSM 13181]
gi|390620405|gb|AFM21552.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Anaerobaculum mobile DSM 13181]
Length = 304
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 16/301 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
C C + KA + P+ +C E F + + + I +F ++I + SGGKDS
Sbjct: 3 CRIC-RAKAIISLPQHNLALCAEHFDAWMLKRVTKAIEEFGMFSKEDKILVAVSGGKDSL 61
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGI--SGYRDDSLQTVKRNEIQYGLPLKIVSYKDL 133
L +L L G D L I+ GI Y D+S + + L +V+ + L
Sbjct: 62 ALWDILLRL------GYDSSGLYINLGIKEGDYSDESERLTTAFANRANAELYVVNIEQL 115
Query: 134 YGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
+G ++ + + C+ CGV +R +++ A + D IATGHN DD A +L N+L
Sbjct: 116 HGMSIPDKA-YTKKRKTCSLCGVTKRYYMNKIARDMGFDVIATGHNLDDQAAALLGNMLF 174
Query: 194 GDIARLSRCTLITTG-EDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYR 252
+ L++ + + G + KP Y EKE Y + + Y EC YS A
Sbjct: 175 WKMDYLAKGAPYSPPMKAGEFAKAKPMVYCTEKEDT-VYCLLRGIAYIERECPYSKGATS 233
Query: 253 GFAREFIKDLERLRPRA----ILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKA 308
+ + ++E P A +K+ + F + TC CG S + C
Sbjct: 234 LRWKRALFEMEESSPGAKQAFYFGYVKNIDLFAGKDEKEDVPPLTCRVCGTPSWNEVCSF 293
Query: 309 C 309
C
Sbjct: 294 C 294
>gi|160894783|ref|ZP_02075558.1| hypothetical protein CLOL250_02334 [Clostridium sp. L2-50]
gi|156863717|gb|EDO57148.1| prevent-host-death family protein [Clostridium sp. L2-50]
Length = 385
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 28 RPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRR 87
+ K +E R+ F + + + I +L K G++IA+ SGGKDS ++A EL
Sbjct: 102 KAKDVELSLRKKFKKSIWSKFTKAINTYELVKPGDKIAVCISGGKDSMLMAKCFQELKLH 161
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL 147
+ + ++ L +D GY + + + ++ N +P+ I D++ E V +
Sbjct: 162 NKFEFEVKFLVMD---PGYSETNRKVIEENAKSLNIPITIFE-SDIF-----ESVFTVE- 211
Query: 148 KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITT 207
K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +T
Sbjct: 212 KSPCYLCARMRRGHLYHFAQELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLHST 271
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN---------AYRGFAREF 258
+G + +P E +I + + L + C ++ + R +E
Sbjct: 272 NFEG-MELIRPLYLVREDDIK-AWRDYNGLHFIQCACKFTDTCTTCNNENRSKRVEIKEL 329
Query: 259 IKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
I+ L+++ P +I KS EN + T + G
Sbjct: 330 IQTLKQVNPYVEGNIFKSVENVNLDTVVAWKQHG 363
>gi|302670988|ref|YP_003830948.1| PP-loop family protein [Butyrivibrio proteoclasticus B316]
gi|302395461|gb|ADL34366.1| PP-loop family protein [Butyrivibrio proteoclasticus B316]
Length = 287
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
L + G++IA+ SGGKDS +LA + EL R + ++ L+++ GY D + Q + R
Sbjct: 37 LIQDGDKIAVCISGGKDSMLLAKLFQELARHGKHNFEVIFLAMN---PGYSDANYQNILR 93
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
N +PL I D++ D KV G + C C RR AL A L +KIA
Sbjct: 94 NAELMNIPLTIFE-SDIF----DVTTKVGG--SPCYLCARMRRGALYSKAQELGCNKIAL 146
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ ET+ + ++ G + L +T G + +P E++I+ + +
Sbjct: 147 GHHFDDVIETIFMAMMYGGQIQTMMPKLHSTNFKG-MELIRPLYLVREEDIVH-WMNYNE 204
Query: 237 LDYFSTECIY-------------SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
L + C S + R + I+ L + P +I KS EN I+
Sbjct: 205 LKFIRCACKLTEQLEKEGNLHNDSSVSKRAETKAIIRKLRDINPYLESNIFKSVENVSIN 264
Query: 284 T 284
Sbjct: 265 A 265
>gi|442806114|ref|YP_007374263.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741964|gb|AGC69653.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 244
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 38 ECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLL 97
E ++ + + + + + G+RIA+G SGGKDS L + L L R + +LF +
Sbjct: 4 EALFQKLLARVRKAVEDYDMIQEGDRIAVGVSGGKDSLTLLYCLKALQRFYPKKFELFAI 63
Query: 98 SIDEGISGYRDDSLQTVKRN-EIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGV 156
+I G G+ +L + N IQY + ++ + V KN C+ C
Sbjct: 64 TISLGNEGFDLPALIDIYENIGIQYHIEDTQIA---------KIVFDVRNEKNPCSLCSN 114
Query: 157 FRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLIT-TGEDGPIP 214
+R A+ A L +K+A H+ DD+ ET+LL++ G I S T + TG I
Sbjct: 115 MKRGAIHNAAKKLGCNKVAFAHHKDDVIETLLLSLFYEGRIHTFSPVTYLDRTG----IT 170
Query: 215 RCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
+PF YT EK I +Y K + + C R + +E I L +
Sbjct: 171 LIRPFIYTEEKMIR-SYVNKKGIMPIPSGCRAEGKTKRHYVKELIAGLMK 219
>gi|210620722|ref|ZP_03292208.1| hypothetical protein CLOHIR_00151 [Clostridium hiranonis DSM 13275]
gi|210155223|gb|EEA86229.1| hypothetical protein CLOHIR_00151 [Clostridium hiranonis DSM 13275]
Length = 281
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 28 RPKTLEQICRECFYEVFEEEIH----QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSE 83
RP LE+I R C + +++ I + I +L G+RIA+ SGGKDS ++A + E
Sbjct: 10 RP--LEEIER-CIVKRYKKHIWSKFLKAINDYKLISDGDRIAVAISGGKDSLLMAKMFQE 66
Query: 84 LNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 143
L + N +L L++D GYRDD VK E+ L + + ++ DEI +
Sbjct: 67 LKKYSNIDFELVFLAMD---PGYRDDI--RVKLEELCKYLNIPVEIFESGIFRITDEIAR 121
Query: 144 VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRC 202
N C C RR AL A L +K+A GH+ DD+ ET ++NIL G+ +
Sbjct: 122 ----DNPCYMCARMRRGALYNKAEELGCNKLALGHHYDDVIETTMMNILCSGNFKTM--L 175
Query: 203 TLITTGEDGPIPRCKPFKYTYEKEI 227
I + + G + +P Y E+ I
Sbjct: 176 PKIKSSKSGEMQIIRPLYYIREEYI 200
>gi|339481542|ref|YP_004693328.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Nitrosomonas sp.
Is79A3]
gi|338803687|gb|AEI99928.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Nitrosomonas sp.
Is79A3]
Length = 301
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ I + +AG+RI + SGGKDS + +L L +L +++D+ G+
Sbjct: 19 QVGTAIADFNMIEAGDRIMVCLSGGKDSYAMLDILRNLQAHAPLEFELIAVNLDQKQPGF 78
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ Q + G+P +IV +D Y + +VI K C+ C RR L R
Sbjct: 79 PE---QVLPGYLTDIGMPYRIVE-QDTYSV----VKRVIAEGKTTCSLCSRLRRGVLYRV 130
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
AS L V KIA GH+ DDI ET+ LN+ G + L++ +DG +P Y EK
Sbjct: 131 ASELGVTKIALGHHRDDILETLFLNMFYGGKLKAMPPKLVS--DDGKHIVIRPLAYCKEK 188
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
++ YA + C N R +E ++ ++ P + + +S +N ++S
Sbjct: 189 DLA-AYAEAENFPIIPCNLCGSQKNLQRQAIKEMMQQWDKKFPGRLETMFRSIQNIQLS 246
>gi|261343943|ref|ZP_05971588.1| PP-loop family protein [Providencia rustigianii DSM 4541]
gi|282568332|gb|EFB73867.1| PP-loop family protein [Providencia rustigianii DSM 4541]
Length = 304
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 20 DVGQAIADFNMIEDGDRIMVCLSGGKDSYTLLAILQSLQKSAPISFSLVAVNLDQKQPGF 79
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 80 PEHILPAYLD---ELGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 132
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 133 TELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 190
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I +A K C PN R +E ++D ++ P I + + +N
Sbjct: 191 IE-RFAEAKGFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFSATQN 243
>gi|160892659|ref|ZP_02073449.1| hypothetical protein CLOL250_00189 [Clostridium sp. L2-50]
gi|156865700|gb|EDO59131.1| PP-loop family protein [Clostridium sp. L2-50]
Length = 251
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I ++ G++IA+G SGGKDS L + L+EL R + DL ++++ G D
Sbjct: 12 RAIDSYEMIDNGDKIAVGISGGKDSLTLLYALAELRRFYPKKFDLIAITVNLGF-----D 66
Query: 110 SLQTVKRNEI--QYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ T K ++ + +P IV ++Y D + V KN C+ C R+ AL++ +
Sbjct: 67 NFDTAKIEQLCKELDVPYYIVD-TEIY----DIVFNVRKEKNPCSLCAKMRKGALNQKLN 121
Query: 168 LLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
L +KIA H+ DD ET L+++L G I S T + E + +P Y E E
Sbjct: 122 DLGCNKIAYAHHKDDFIETFLMSLLYEGRIHTFSPKTYLDKSE---LMVIRPLMYINEGE 178
Query: 227 IMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
I+ ++ +L + C R +A++ + LE+ P
Sbjct: 179 II-SFKNDMQLPVIKSPCPADGYTKREYAKQTLAKLEKETP 218
>gi|170734333|ref|YP_001766280.1| C32 tRNA thiolase [Burkholderia cenocepacia MC0-3]
gi|205830562|sp|B1JZU7.1|TTCA_BURCC RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|169817575|gb|ACA92158.1| PP-loop domain protein [Burkholderia cenocepacia MC0-3]
Length = 331
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 24 GRPALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I+D ++ P
Sbjct: 243 LKRAEMKALIRDWDKRFP 260
>gi|295093682|emb|CBK82773.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Coprococcus sp. ART55/1]
Length = 408
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G+RIA+ SGGKDS ++A EL R + + +L + +D GY + + ++
Sbjct: 157 ELVKEGDRIAVCISGGKDSFLMAKCFQELKRHNKFPFELKFIVMD---PGYSPANRKVIE 213
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I D++ D + V K+ C C RR L A L +KIA
Sbjct: 214 DNARMLNIPIQIFE-SDIF----DSVYNV--EKSPCYLCARMRRGHLYSYAKELGCNKIA 266
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L G + L +T +G + +P E +I + +
Sbjct: 267 LGHHYDDVIETILMGMLYGAQMQTMMPKLHSTNFEG-MELIRPLYMVREDDIK-AWRDYN 324
Query: 236 RLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
L + C ++ + R ++ I L++ P +I KS EN I T
Sbjct: 325 ELHFIQCACKFTDTCTTCNNEETKSKRQEIKQLIATLKKTNPFVEGNIFKSVENVNIDTL 384
Query: 286 TKMPEQGT 293
+ + G
Sbjct: 385 IEYKQGGV 392
>gi|404483691|ref|ZP_11018908.1| hypothetical protein HMPREF1135_01968 [Clostridiales bacterium
OBRC5-5]
gi|404343050|gb|EJZ69417.1| hypothetical protein HMPREF1135_01968 [Clostridiales bacterium
OBRC5-5]
Length = 382
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G++IA+ SGGKDS ++A + EL R +L L ++ GY D + QT+
Sbjct: 138 ELIKDGDKIAVCISGGKDSMLMAKLFQELLRHGKRNFELVFLVMN---PGYDDINYQTIV 194
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P+ +V +Y ++ K+ C C RR L A L +KIA
Sbjct: 195 DNAKILDVPI-VVFESSIYDIVAED------EKSPCYLCARMRRGHLYAKAKELGCNKIA 247
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+++ +L G + L +T +G + +P E++I+ +A +
Sbjct: 248 LGHHFDDVIETIVMGMLYGAQIQTMMPKLHSTNFEG-MELIRPLYLVREEDIIH-WAKYN 305
Query: 236 RLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
L++ C + N + R ++ I++L P +I +S EN + T
Sbjct: 306 ELNFIRCACRLTDNCSISETGDKGSMRAEVKKLIRELAAKNPYIEKNIFRSVENVSLDTV 365
Query: 286 TKMPEQGT 293
+ G
Sbjct: 366 IAYKKNGV 373
>gi|163854634|ref|YP_001628932.1| C32 tRNA thiolase [Bordetella petrii DSM 12804]
gi|205830557|sp|A9HY25.1|TTCA_BORPD RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|163258362|emb|CAP40661.1| conserved hypothetical protein [Bordetella petrii]
Length = 324
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E + I + +AG+R+ + SGGKDS L +L L +R + D+ +++D+ G+
Sbjct: 33 ETTRAIADYNMIEAGDRVMVCLSGGKDSYALLDILLSLRKRAPFSFDIVAVNLDQKQPGF 92
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ L + G+P I + +D Y + +VI K C+ C RR L R
Sbjct: 93 PPEVLPNYLTS---LGVPFHIET-QDTYSI----VTRVIPEGKTMCSLCSRLRRGILYRV 144
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A L KIA GH+ DDI T LN+ G A+ L++ +DG +P Y E
Sbjct: 145 AGELGATKIALGHHRDDILATFFLNLFYGGKAKAMPPKLVS--DDGRHTVIRPLAYVPEH 202
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP 267
+++ YA FK+ C N R I++ +R P
Sbjct: 203 DLV-AYAKFKQFPIIPCNLCGSQENLKRQEVSRMIQEWDRRHP 244
>gi|218282849|ref|ZP_03489002.1| hypothetical protein EUBIFOR_01588 [Eubacterium biforme DSM 3989]
gi|218216305|gb|EEC89843.1| hypothetical protein EUBIFOR_01588 [Eubacterium biforme DSM 3989]
Length = 378
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 27/242 (11%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G+ IA+ SGGKDS ++A EL++ D+ + +D GY ++ ++
Sbjct: 128 ELVKEGDCIAVCISGGKDSMLMAKCFQELHKHSPVPFDVKYIVMD---PGYSKENHDVIE 184
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
RN + +P++I D++ D + + KN C C RR L A L +KIA
Sbjct: 185 RNAQRLNIPIEIFE-SDIF----DNVFNI--EKNPCYICARMRRGHLYNYAKNLGCNKIA 237
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+++L G + L + G + +P +E +I A+ K
Sbjct: 238 LGHHYDDVIETILMSMLYGGQIQTMMPKLHSNNFKG-MEVIRPLYLIHEDDIK---AWAK 293
Query: 236 RLD-YF------------STECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
D YF + C+ + R + IK+L+++ P +I KS EN +
Sbjct: 294 HNDLYFIQCACKFTQACANETCLTQSKSKRLEMKNLIKELKKVNPFVEQNIFKSVENVSL 353
Query: 283 ST 284
T
Sbjct: 354 KT 355
>gi|291556343|emb|CBL33460.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Eubacterium siraeum V10Sc8a]
Length = 241
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I + + L + G+RIA+G SGGKDS VL L+++ R + D+ ++ID G +G
Sbjct: 8 IRKAVQDFDLIQKGDRIAVGVSGGKDSLVLLAGLAQMRRFAEFDYDITAVTIDPGFNGV- 66
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGA 166
++ V R + +P +V + + EIV + N C+ C RR AL A
Sbjct: 67 PNNYDAVARLCEKLDVPFSLVHTQ------IGEIVFDIRKEPNPCSLCANMRRGALHDAA 120
Query: 167 SLLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
+K+A GHN DD+ ET ++N+ G I S T + + I +P E
Sbjct: 121 KAAGCNKLALGHNNDDVIETFIMNLFNEGRIGCFSPKTHLDRKD---ITVIRPLVLAPES 177
Query: 226 EIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
+++ + L+ + C R +EF++D+E
Sbjct: 178 QVL-SACNRNNLEIVKSVCPADKTTTRQKTKEFLRDMEH 215
>gi|386856178|ref|YP_006260355.1| hypothetical protein DGo_CA0970 [Deinococcus gobiensis I-0]
gi|379999707|gb|AFD24897.1| hypothetical protein DGo_CA0970 [Deinococcus gobiensis I-0]
Length = 259
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+R+ + SGGKDS L L L RR L L++D+G G+ D L R
Sbjct: 1 MIEEGDRVMVCLSGGKDSYTLLDTLLHLQRRAPVRFGLVALNLDQGQPGFPKDVL---PR 57
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
G+ ++V Y+D Y K K C C RR AL A L KIA
Sbjct: 58 YLAALGVEHELV-YQDTYSVVK---AKTPAGKTTCALCSRLRRGALYAHARRLGATKIAL 113
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DDI ET+ +N+ G ARL +DG +P Y E +I+ YA R
Sbjct: 114 GHHRDDILETLFMNLFFG--ARLKAMPPKLQSDDGSNVVIRPLAYVPEADIV-RYAQAAR 170
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKS 276
+ C N R + + ER P + +I+++
Sbjct: 171 FPIIPCDLCGSQANLQREVVGRMLAEWEREHPGRLNNILRA 211
>gi|332290509|ref|YP_004421361.1| C32 tRNA thiolase [Gallibacterium anatis UMN179]
gi|330433405|gb|AEC18464.1| C32 tRNA thiolase [Gallibacterium anatis UMN179]
Length = 306
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ + I + + G+R+ + SGGKDS L +L L ++ +++D+ G+
Sbjct: 21 EVGKAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLKLNAPVNFEIVAVNLDQKQPGF 80
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
++ L T + Q G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 81 PEEVLPTYLQ---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 133
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DD+ ET+ LN+ G + LI+ +DG +P Y EK+
Sbjct: 134 TELGATKIALGHHRDDMLETLFLNMFYGGKMKSMPPKLIS--DDGKQIVIRPLAYCREKD 191
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
I YA K+ C PN R +E ++ +R P I + + +N
Sbjct: 192 IA-RYAEAKQFPIIPCNLCGSQPNLQRQVVKEMLQQWDRQYPGRIETMFSALQNI 245
>gi|197285222|ref|YP_002151094.1| C32 tRNA thiolase [Proteus mirabilis HI4320]
gi|227355648|ref|ZP_03840042.1| PP-loop superfamily ATPase MesJ [Proteus mirabilis ATCC 29906]
gi|425068175|ref|ZP_18471291.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW6]
gi|194682709|emb|CAR42884.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227164255|gb|EEI49148.1| PP-loop superfamily ATPase MesJ [Proteus mirabilis ATCC 29906]
gi|404600558|gb|EKB00993.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW6]
Length = 306
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G++I + SGGKDS L +L L + L +++D+ G+
Sbjct: 21 VGQAIADFNMIEDGDKIMVCLSGGKDSYTLLSILMNLQKSAPIQFSLIAVNLDQKQPGFP 80
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG + I + K C+ C RR L R A+
Sbjct: 81 EHILPEYLE---QLGVEYKIVE-ENTYGIVKEIIPEG---KTTCSLCSRLRRGILYRTAT 133
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
+ KIA GH+ DDI ET+ LN+ G +L +DG +P Y EK+I
Sbjct: 134 EVGATKIALGHHRDDILETLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYAREKDI 191
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
+A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 192 E-RFAQAKNFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRATQNI 244
>gi|425072430|ref|ZP_18475536.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW4]
gi|404597100|gb|EKA97606.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW4]
Length = 306
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G++I + SGGKDS L +L L + L +++D+ G+
Sbjct: 21 VGQAIADFNMIEDGDKIMVCLSGGKDSYTLLSILMNLQKSAPIQFSLIAVNLDQKQPGFP 80
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG + I + K C+ C RR L R A+
Sbjct: 81 EHILPEYLE---QLGVEYKIVE-ENTYGIVKEIIPEG---KTTCSLCSRLRRGILYRTAT 133
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
+ KIA GH+ DDI ET+ LN+ G +L +DG +P Y EK+I
Sbjct: 134 EVGATKIALGHHRDDILETLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYAREKDI 191
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
+A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 192 E-RFAQAKNFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRATQNI 244
>gi|206559013|ref|YP_002229773.1| C32 tRNA thiolase [Burkholderia cenocepacia J2315]
gi|421865544|ref|ZP_16297220.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia
cenocepacia H111]
gi|444363089|ref|ZP_21163558.1| PP-loop family protein [Burkholderia cenocepacia BC7]
gi|444371676|ref|ZP_21171216.1| PP-loop family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198035050|emb|CAR50922.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358074428|emb|CCE48098.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia
cenocepacia H111]
gi|443594855|gb|ELT63477.1| PP-loop family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443595582|gb|ELT64158.1| PP-loop family protein [Burkholderia cenocepacia BC7]
Length = 321
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 14 GRPALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 64
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 65 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 120
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 121 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 175
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 176 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 232
Query: 250 AYRGFAREFIKDLERLRP 267
R + I+D ++ P
Sbjct: 233 LKRAEMKALIRDWDKRFP 250
>gi|432328216|ref|YP_007246360.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Aciduliprofundum sp. MAR08-339]
gi|432134925|gb|AGB04194.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Aciduliprofundum sp. MAR08-339]
Length = 288
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 35 ICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDL 94
+CRE F +FE + +V+ + + G +IA+ SGGKDS VL ++ + D
Sbjct: 19 LCREDFNRLFERRVEKVM---KRYNTGGKIALALSGGKDSMVLLHYFAKKD------YDF 69
Query: 95 FLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFC 154
F I+ GI Y + V+ YG+ L I + ++ YG+ + +I + C+ C
Sbjct: 70 FGYFINLGIGEYSQRMEKIVRDAAKMYGVDLIITNLQEEYGFGISDI-----RRKPCSAC 124
Query: 155 GVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP-- 212
G +R ++R +ATGHN DD + N L + +R + + P
Sbjct: 125 GTVKRYLMNRVPRENGASVVATGHNMDDFLDFFFKNTLSKNYM-WNRNMVPYLPAEHPKL 183
Query: 213 IPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLE----RLRPR 268
+P+ +P ++EI YA + Y +C P A ++ D+E R +
Sbjct: 184 LPKIRPLYLLGDREIE-IYARMNDVPYSPEKC---PLAKFSGWKDIFYDIETRKKNFRYQ 239
Query: 269 AILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVL 311
IL + + E F + E C CG SS + C C L
Sbjct: 240 MILSVWRMAEFF----PKEERELQECSVCGEPSSGEVCAFCKL 278
>gi|325980894|ref|YP_004293296.1| PP-loop domain-containing protein [Nitrosomonas sp. AL212]
gi|325530413|gb|ADZ25134.1| PP-loop domain protein [Nitrosomonas sp. AL212]
Length = 302
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 17/241 (7%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ I + +AG+RI + SGGKDS L +L L +L +++D+ G+
Sbjct: 19 QVGTAIADFNMIEAGDRIMVCLSGGKDSYALLDILRNLQIHSPVNFELIAVNLDQKQPGF 78
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ Q + Q G+P +IV +D Y + +VI K C+ C RR L R
Sbjct: 79 PE---QVLPNYLTQIGMPFQIVE-QDTYSV----VKRVIAEGKTTCSLCSRLRRGVLYRV 130
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A L KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK
Sbjct: 131 AGELGATKIALGHHRDDILETLFLNMFYGGKLKAMPPKLVS--DNGRHIVIRPLAYCKEK 188
Query: 226 EIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
++ AY + D+ C N R +E ++ ++ P + + +S +N ++
Sbjct: 189 DLA---AYAEISDFPIIPCNLCGSQKNLQRQAIKEMMQQWDKKFPGRLETMFRSIQNIQL 245
Query: 283 S 283
S
Sbjct: 246 S 246
>gi|400756322|ref|NP_951189.2| tRNA 2-thiocytidine biosynthesis protein TtcA [Geobacter
sulfurreducens PCA]
gi|409910685|ref|YP_006889150.1| tRNA (2-thio-C32)-thioltransferase [Geobacter sulfurreducens KN400]
gi|298504242|gb|ADI82965.1| tRNA (2-thio-C32)-thioltransferase [Geobacter sulfurreducens KN400]
gi|399107633|gb|AAR33462.2| tRNA (2-thio-C32)-thioltransferase [Geobacter sulfurreducens PCA]
Length = 257
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 20/261 (7%)
Query: 41 YEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSID 100
Y+ + + + + L + G+RIA+ SGGKDS L +L L RR +L ++ID
Sbjct: 9 YKKIKNAVGRAVADFGLIRDGDRIAVAVSGGKDSYTLLHILEGLRRRAPVKYELVAVTID 68
Query: 101 EGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQ 160
G G+R D + + R E + L+ + D+ K + C+ C +R
Sbjct: 69 SGYPGFRSDVIASYLR-EQGFAHHLETTDHYDIIRE------KRRPGSSYCSICARLKRG 121
Query: 161 ALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +K+A GH+ DD ET+LLN G + ++ L GE I +P
Sbjct: 122 VLYTLAQKLGCNKLALGHHLDDFVETLLLNQFFVGTLKAMAPRMLADNGETTVI---RPL 178
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSP-----NAYRGFAREFIKDLERLRPRAILDII 274
Y E+EI+ F R + F C P + R ++ + +LE+ P ++
Sbjct: 179 VYVEEREII----PFARENRFPVVCCSCPVCGTADLQRRRMKKLLTELEKENPAVKRSLL 234
Query: 275 KSGENFRISTSTKMPEQGTCE 295
++ N + + Q C+
Sbjct: 235 RALGNVQPRYLLDLELQRLCD 255
>gi|255526695|ref|ZP_05393599.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296185613|ref|ZP_06854022.1| PP-loop family protein [Clostridium carboxidivorans P7]
gi|255509627|gb|EET85963.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296049741|gb|EFG89166.1| PP-loop family protein [Clostridium carboxidivorans P7]
Length = 289
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 18/240 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I +L + G++IA+ SGGKDS ++A + EL+R L +++D GY D
Sbjct: 42 KAIKNYKLVEEGDKIAVAISGGKDSMLMAKLFQELHRHRQMNFQLEFIAMD---PGYHKD 98
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
+ + N +P++I + + E+ I K C C RR AL A L
Sbjct: 99 IKKLLIDNCEYLNIPVQI------FESGIFEVADKIAQKYPCYMCARMRRGALYTKAKEL 152
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+K+A GH+ +D+ ET LLN+L + L +T +G I +P Y E+ I
Sbjct: 153 GCNKLALGHHFNDVIETTLLNVLYSGNFKTMLPKLKSTNFEG-IELIRPLYYIEEENIQ- 210
Query: 230 TYAYFKRLDYFSTECIYSPNA-----YRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
+ ++ + C +A R ++ IK+L++ P+ I KS EN + +
Sbjct: 211 --RFIQKSGIWPLNCACMVSAGKIGNKRYEIKDLIKELKKNFPQVDKSIFKSAENVNMDS 268
>gi|81703661|sp|Q74GW7.1|TTCA_GEOSL RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
Length = 282
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 20/261 (7%)
Query: 41 YEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSID 100
Y+ + + + + L + G+RIA+ SGGKDS L +L L RR +L ++ID
Sbjct: 34 YKKIKNAVGRAVADFGLIRDGDRIAVAVSGGKDSYTLLHILEGLRRRAPVKYELVAVTID 93
Query: 101 EGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQ 160
G G+R D + + R E + L+ + D+ K + C+ C +R
Sbjct: 94 SGYPGFRSDVIASYLR-EQGFAHHLETTDHYDIIRE------KRRPGSSYCSICARLKRG 146
Query: 161 ALDRGASLLKVDKIATGHNADDIAETVLLN-ILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +K+A GH+ DD ET+LLN G + ++ L GE I +P
Sbjct: 147 VLYTLAQKLGCNKLALGHHLDDFVETLLLNQFFVGTLKAMAPRMLADNGETTVI---RPL 203
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSP-----NAYRGFAREFIKDLERLRPRAILDII 274
Y E+EI+ F R + F C P + R ++ + +LE+ P ++
Sbjct: 204 VYVEEREII----PFARENRFPVVCCSCPVCGTADLQRRRMKKLLTELEKENPAVKRSLL 259
Query: 275 KSGENFRISTSTKMPEQGTCE 295
++ N + + Q C+
Sbjct: 260 RALGNVQPRYLLDLELQRLCD 280
>gi|187925700|ref|YP_001897342.1| PP-loop domain-containing protein [Burkholderia phytofirmans PsJN]
gi|205830571|sp|B2T6U6.1|TTCA_BURPP RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|187716894|gb|ACD18118.1| PP-loop domain protein [Burkholderia phytofirmans PsJN]
Length = 336
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 15/279 (5%)
Query: 4 AESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER 63
A + S T + K L R + E ++ ++ + IV + + G++
Sbjct: 10 AATASPADATEATQTAARAKTPLTRREQKEAYENNKLFKRLARQVGEAIVDFNMIENGDK 69
Query: 64 IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGL 123
+ + SGGKDS + +L L R D+ +++D+ G+ + L + Q +
Sbjct: 70 VMVCLSGGKDSYAMLEILMRLRERAPINFDIVAVNLDQKQPGFPEHVLPEYLK---QLDI 126
Query: 124 PLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNAD 181
P I + +D Y IVK V K C+ C RR L R A L KIA GH+ D
Sbjct: 127 PFHIEN-QDTYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRD 180
Query: 182 DIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFS 241
DI +T+LLN+ G +L +DG +P Y E ++ YA +
Sbjct: 181 DILQTLLLNMFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIP 237
Query: 242 TE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
C PN R + ++D E+ P I ++ + N
Sbjct: 238 CNLCGSQPNLKRAEMKALVRDWEKRFPGRIENMFNALSN 276
>gi|294636268|ref|ZP_06714674.1| PP-loop family protein [Edwardsiella tarda ATCC 23685]
gi|451964881|ref|ZP_21918143.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Edwardsiella tarda
NBRC 105688]
gi|291090443|gb|EFE23004.1| PP-loop family protein [Edwardsiella tarda ATCC 23685]
gi|451316458|dbj|GAC63505.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Edwardsiella tarda
NBRC 105688]
Length = 311
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRVMVCLSGGKDSYTMLEILRNLQQSAPVDFTLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ +IV +D YG ++I + K C+ C RR L R A+
Sbjct: 86 ETVLPAYLDAQ---GIEYRIVE-EDTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L +KIA GH+ DD+ ET+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELNCNKIALGHHRDDMLETLFLNMFYG--GKLKGMPPKLMSDDGQHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A K C PN R +E ++D ++ P I + ++ +N
Sbjct: 197 E-RFASAKAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRAMQN 248
>gi|89094039|ref|ZP_01166983.1| hypothetical protein MED92_02041 [Neptuniibacter caesariensis]
gi|89081713|gb|EAR60941.1| hypothetical protein MED92_02041 [Oceanospirillum sp. MED92]
Length = 320
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 37/315 (11%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E+ + I + + G+++ + SGGKDS + +L L R +L +++D+ G+
Sbjct: 39 EMGRAIQDFNMIEEGDKVMVCLSGGKDSYAMLDILMNLQRSAPVNFELVAVNLDQKQPGF 98
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+D L + G+P I+ +D Y + E+V K C C RR +L A
Sbjct: 99 PEDVLPAYLES---IGVPFHILE-RDTYS-VVKEVVP--EGKTTCALCSRLRRGSLYGFA 151
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ +KIA GH+ DDI ET+ LN+ G +L +DG +P Y+ EK+
Sbjct: 152 EEIGANKIALGHHRDDILETLFLNMFYG--GKLKSMPPKLVSDDGKNMVIRPLAYSREKD 209
Query: 227 IMFTYAYFKRLDYFS----TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRI 282
I A F L F C N R +E ++D +R P I + +S ++
Sbjct: 210 I----AAFAELKGFPIIPCNLCGSQENLQRQVIKEMLQDWDRRFPGRIETMFRSLQHV-- 263
Query: 283 STSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIVRSRGQNNERTKDMKQNK 342
+ S A +GL G P GI Q K + ++
Sbjct: 264 -----------------VPSHLADTALFDFKGLQHGFPH-GIAPDSAQAANLEKPVDPSE 305
Query: 343 GTKNIESKQCGTLDF 357
++ ++ L
Sbjct: 306 AVQSFNPQKIDVLSL 320
>gi|291522347|emb|CBK80640.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Coprococcus catus GD/7]
Length = 248
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 19/232 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
Q+ G++IAIG SGGKDS + + L L R + +L +++ G+ + D+++++
Sbjct: 18 QMIDEGDKIAIGVSGGKDSLTMLYALKGLQRFYPKHFELEAITVGLGLGNFNMDAVKSLC 77
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVI----GLKNNCTFCGVFRRQALDRGASLLKV 171
NE+ +P IVS EI +I KN C+ C R+ AL+ A L
Sbjct: 78 -NELN--IPYTIVS---------TEIGPIIFDQRHEKNPCSLCAKMRKGALNNKALELGC 125
Query: 172 DKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTY 231
+KIA GH+ DD+ ET+L++++ +T E + +P Y E +I+ +
Sbjct: 126 NKIAYGHHRDDLVETMLMSLIYE--GHFYAFPPVTKLERTGLTVIRPLLYMTEPDII-GF 182
Query: 232 AYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
A + L + C + + R + + + + R P AI + + N IS
Sbjct: 183 ARKQNLPVAKSPCPANGHTRREYTKNLMHQINRENPGAIDKMFTAILNGNIS 234
>gi|337755201|ref|YP_004647712.1| tRNA(cytosine32)-2-thiocytidine synthetase [Francisella sp.
TX077308]
gi|336446806|gb|AEI36112.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Francisella sp.
TX077308]
Length = 256
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 13/235 (5%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I + I +L + G+++ + SGGKDS L VL L + Y +DL + ++D+ G+
Sbjct: 17 ITKAIADYKLIEKGDKVMLCLSGGKDSFGLLKVLHGLVKDGTYDIDLHVYTLDQSQPGWD 76
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
D L+ + G+ +I + K+ YG +D KV K C+ C RR + R A
Sbjct: 77 DSQLRKYLDD---LGISYEIET-KNTYGVVID---KVPEGKTYCSLCSRLRRGNIYRYAK 129
Query: 168 LLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
K+DKI GH+ DD+ E++L++IL +G I + + GE+ I +P E++
Sbjct: 130 EHKMDKIILGHHRDDLIESLLMSILYQGQIKSMPPKYITQDGENTVI---RPMVLVQERD 186
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
+ +A ++L C N R ++ I+DL P+ +I+ S N
Sbjct: 187 -LIEFAKEEQLPIIPCNLCGSQENLKRKKVKKLIQDLAHENPKVPSNILNSLSNV 240
>gi|375092269|ref|ZP_09738553.1| hypothetical protein HMPREF9709_01415 [Helcococcus kunzii ATCC
51366]
gi|374561343|gb|EHR32684.1| hypothetical protein HMPREF9709_01415 [Helcococcus kunzii ATCC
51366]
Length = 284
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
L + G++IA+G SGGKDS +LA +L +L + ++ +++D G S L+ + R
Sbjct: 40 LIEEGDKIAVGMSGGKDSLILAKMLQQLQKFSRVKYEVEYIAMDPGFSPENRQKLEDICR 99
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+P+KI + + E+V I + C C RR L A L +K+A
Sbjct: 100 ---YMDIPVKI------FETNIFEVVHEISKDSPCYLCARMRRGNLYAKAKELGCNKLAL 150
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM--FTYAYF 234
GH+ +D+ ET+++NI+ R L + +G + +P EK+I+ Y
Sbjct: 151 GHHFNDVIETIMMNIMWNGSYRSMMPKLKSRNFEG-LELIRPLYLVEEKDIIRWINYTGI 209
Query: 235 KRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQG 292
+D ++ R +E I +L++ P +I KS EN + T + G
Sbjct: 210 IPMDEACPIMEKKNDSQRQNIKEMIANLKKDNPNIEKNIFKSAENVAVDTVISYTKDG 267
>gi|163816026|ref|ZP_02207396.1| hypothetical protein COPEUT_02206 [Coprococcus eutactus ATCC 27759]
gi|158448836|gb|EDP25831.1| PP-loop family protein [Coprococcus eutactus ATCC 27759]
Length = 402
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G+RIA+ SGGKDS ++A EL R + + +L + +D GY + + ++
Sbjct: 153 ELVKEGDRIAVCISGGKDSFLMAKCFQELKRHNKFPFELKFIVMD---PGYSPANRKVIE 209
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I D++ D + V K+ C C RR L A L +KIA
Sbjct: 210 DNARMLNIPIQIFE-SDIF----DSVYNV--EKSPCYLCARMRRGHLYSYAKELGCNKIA 262
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ +L G + L +T +G + +P E +I + +
Sbjct: 263 LGHHYDDVIETILMGMLYGAQMQTMMPKLHSTNFEG-MELIRPLYMVREDDIK-AWRDYN 320
Query: 236 RLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
L + C ++ + R ++ I L++ P +I KS EN + T
Sbjct: 321 ELHFIQCACKFTDTCTTCNNEETKSKRQEIKQLIATLKKTNPFVEGNIFKSVENVNVDTL 380
Query: 286 TKMPEQGT 293
+ + G
Sbjct: 381 IEYKQGGV 388
>gi|149911837|ref|ZP_01900439.1| hypothetical protein PE36_11367 [Moritella sp. PE36]
gi|149805090|gb|EDM65114.1| hypothetical protein PE36_11367 [Moritella sp. PE36]
Length = 309
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 46 EEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISG 105
E + I+ + + G+R+ + SGG DS + +L +L D+ +++D+ G
Sbjct: 23 HETGKAIIDYNMIEDGDRVMVCLSGGADSYTMLDILLQLKAAAPISFDIIAVNLDQKQPG 82
Query: 106 YRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRG 165
+ +D L N G+ KIV KD Y D+I + K C+ C RR L
Sbjct: 83 FPEDILPRYLEN---LGIEYKIVQ-KDTYSIVKDKIPEG---KTTCSLCSRLRRGILYNA 135
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A L+ K+A GH+ADDI ET+ LN+ G + LI+ + + R P Y E
Sbjct: 136 AVELRATKLALGHHADDIVETLFLNMFHGAKMKTMPPKLISDDKRNIVIR--PLAYCREA 193
Query: 226 EIMFTYAYFK 235
+I Y+ FK
Sbjct: 194 DIK-AYSAFK 202
>gi|37526466|ref|NP_929810.1| C32 tRNA thiolase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81419231|sp|Q7N3Y7.1|TTCA_PHOLL RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|36785897|emb|CAE14949.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 306
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+RI + SGGKDS L +L L + L +++D+ G+
Sbjct: 22 DVGQAIADFNMIEEGDRIMVCLSGGKDSYTLLSILQNLQKSAPVNFSLVAVNLDQKQPGF 81
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGA 166
+ L + G+ KIV ++ YG ++I + K C+ C RR L R A
Sbjct: 82 PEHILPAYLG---ELGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTA 134
Query: 167 SLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+
Sbjct: 135 TELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKD 192
Query: 227 IMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
I YA K C PN R ++ +++ ++ P I + ++ +N
Sbjct: 193 IE-RYATAKAFPIIPCNLCGSQPNLQRQVIKDMLREWDKRYPGRIETMFRAVQN 245
>gi|387129652|ref|YP_006292542.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Methylophaga sp. JAM7]
gi|386270941|gb|AFJ01855.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Methylophaga sp. JAM7]
Length = 287
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 15/240 (6%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
++ Q I + + G+++ + SGGKDS + +L L +L +++D+ G+
Sbjct: 22 QVGQAIADYNMIQDGDKVMVCLSGGKDSYTMLDILLNLRDHAPINFELIAVNLDQKQPGF 81
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDR 164
+ L T Q G+P I+ KD Y IVK V K C C RR L
Sbjct: 82 PETVLPTYLE---QIGVPYHIIE-KDTYS-----IVKEVVPEGKTTCGICSRLRRGNLYS 132
Query: 165 GASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYE 224
A + KIA GH+ DDI ET+ LN+ G + L++ + + R P Y E
Sbjct: 133 YARENGITKIALGHHRDDIIETLFLNMFYGSKIKAMPPKLLSDDKQNVVIR--PLAYVKE 190
Query: 225 KEIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
+I+ YA + C PN R +E ++D E+ P + ++ +S +N S
Sbjct: 191 ADIV-QYAAAQEFPIIPCNLCGSQPNLQRQVIKEMLQDWEKHHPGRLENLFRSIQNVAPS 249
>gi|291521355|emb|CBK79648.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Coprococcus catus GD/7]
Length = 382
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
F++ + + I L + G++IA+ SGGKDS ++A + EL R + + +L L +
Sbjct: 117 FHKALFSKFAKAINTYDLIQPGDKIAVCISGGKDSMLMAKLFQELKRHNKFPFELVFLVM 176
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
D GY + + + ++ N G+P+ + + + E V I K+ C C RR
Sbjct: 177 D---PGYSEVNRKLIENNARIMGVPITV------FESQIFEAVYDIQ-KSPCYLCARMRR 226
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPF 219
L A L +KIA GH+ DD+ ET+L+ +L G + L ++ +G + +P
Sbjct: 227 GHLYNKAKELGCNKIALGHHYDDVIETILMGMLYGAQVQTMMPKLHSSNFEG-MELIRPM 285
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYS-------PNAYRGFAR----EFIKDLERLRPR 268
Y +E + + L + C ++ P+ R + I +L+++ P
Sbjct: 286 -YLIREEDIKQWRDLNGLHFIQCACRFTDTCSSCRPDGTSASKRMEIKQLISELKKVNPF 344
Query: 269 AILDIIKSGENFRISTSTKMPEQGTCER 296
+I KS EN +ST + G
Sbjct: 345 VEGNIFKSVENVNLSTIIAYKQNGQVHH 372
>gi|91793197|ref|YP_562848.1| C32 tRNA thiolase [Shewanella denitrificans OS217]
gi|123166124|sp|Q12N51.1|TTCA_SHEDO RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|91715199|gb|ABE55125.1| PP-loop [Shewanella denitrificans OS217]
Length = 323
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 11/237 (4%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
E+ + I Q+ + G+RI SGGKDS + +L L +R ++ +++D+
Sbjct: 24 LHREVGKAIADYQMIEEGDRIMCCLSGGKDSYAMLDILLNLQKRAPISFEIVAVNLDQKQ 83
Query: 104 SGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALD 163
G+ + L N G+ I+ KD Y ++I + K C+ C RR L
Sbjct: 84 PGFPEHILPAYLDN---LGVAYHILE-KDTYSIVKEKIPEG---KTTCSLCSRLRRGTLY 136
Query: 164 RGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTY 223
A + KIA GH+ DDI ET+ LN+ + L++ +DG +P Y
Sbjct: 137 GFAQRIGATKIALGHHRDDIIETLFLNMFFAGKMKAMPPKLLS--DDGANMVIRPLAYCR 194
Query: 224 EKEIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EK+I YA FK C N RG ++ +K ++ P I I + +N
Sbjct: 195 EKDIA-EYAKFKEFPIIPCNLCGSQENLKRGAVKDMLKQWDKHHPGRIESIFTAMQN 250
>gi|291536194|emb|CBL09306.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Roseburia intestinalis M50/1]
Length = 244
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL ++G++IAIG SGGKDS L + LS L R + DL +++D GY + L V
Sbjct: 18 QLIESGDKIAIGISGGKDSLTLLYALSGLRRFYPQKFDLVAVTVD---LGYENFDLTAVS 74
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKV 171
+ +P IV+ EI K++ + N C+ C R+ AL++ L
Sbjct: 75 KLCHDLDVPYHIVN---------TEIAKILFEERNEKPTCSLCAKMRKGALNQAIKELGC 125
Query: 172 DKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM-FT 230
+K+A H+ DD+ ET L+++ R T ED + +P Y E E+ F
Sbjct: 126 NKVAYAHHMDDVIETAFLSMIFE--GRFYVFPPKTYMEDSDLTIIRPLIYVSEAEVKGFR 183
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
Y +L C N R + ++ I+ L P
Sbjct: 184 NKY--QLPVVKNPCPMDGNTKREYVKKLIQQLNIDNP 218
>gi|238762544|ref|ZP_04623514.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia
kristensenii ATCC 33638]
gi|238699189|gb|EEP91936.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia
kristensenii ATCC 33638]
Length = 318
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 31 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQNLQKSAPINFTLIAVNLDQKQPGFP 90
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+D L + G+ KIV ++ YG D I + K C+ C RR L R A+
Sbjct: 91 EDILPAYLDKQ---GVEYKIVE-ENTYGIVKDIIPEG---KTTCSLCSRLRRGILYRTAT 143
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+I
Sbjct: 144 ELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHVVIRPLAYCREKDI 201
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A + C PN R ++ ++D ++ P I + + +N
Sbjct: 202 E-RFAIAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 253
>gi|317491972|ref|ZP_07950406.1| YdaO protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920093|gb|EFV41418.1| YdaO protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 312
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + IV + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIVDYNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+D L + G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EDILPAYLDS---IGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DD+ +T+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDMLQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A + C PN R ++ ++D +R P I + + +N
Sbjct: 197 E-RFAEARAFPIIPCNLCGSQPNLQRQVIKDMLRDWDRRHPGRIETMFSAMQN 248
>gi|387769371|ref|ZP_10125634.1| PP-loop family protein [Pasteurella bettyae CCUG 2042]
gi|386906680|gb|EIJ71405.1| PP-loop family protein [Pasteurella bettyae CCUG 2042]
Length = 311
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 15/230 (6%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHN--YGLDLFLLSIDEGISGYRDDSLQTV 114
+ + G+++ + SGGKDS L +L LN RHN D+ +++D+ G+ + L
Sbjct: 36 MIEDGDKVMVCLSGGKDSYTLLDIL--LNLRHNAPVHFDIVAVNLDQKQPGFPEHILPQY 93
Query: 115 KRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI 174
++ G+ KIV ++ YG ++I + K C+ C RR L R A+ L KI
Sbjct: 94 LKS---IGVDYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTATELGATKI 146
Query: 175 ATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
A GH+ DD+ T+ LN+ G + LI+ +DG +P Y EK+I YA
Sbjct: 147 ALGHHRDDMLATLFLNMFYGGKLKSMPPKLIS--DDGKQVVIRPLAYCKEKDIE-KYAIA 203
Query: 235 KRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
K+ C PN R +E + +R P + + + +N +S
Sbjct: 204 KQFPIIPCNLCGSQPNLQRQVVKEMLNTWDRQYPGRLETMFSAMQNITLS 253
>gi|238749377|ref|ZP_04610882.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia rohdei ATCC
43380]
gi|238712032|gb|EEQ04245.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia rohdei ATCC
43380]
Length = 313
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFTLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
AS L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ASELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHVVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAVAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|167750534|ref|ZP_02422661.1| hypothetical protein EUBSIR_01510 [Eubacterium siraeum DSM 15702]
gi|167656460|gb|EDS00590.1| PP-loop family protein [Eubacterium siraeum DSM 15702]
Length = 377
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 21 QRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFV 80
Q++ A + K +EQ ++ F + + + +L K +RIA+ SGGKDS ++A +
Sbjct: 95 QKEQADEVSKRVEQSLQKKFRKKIWAAFTKAVKQYELVKENDRIAVCISGGKDSMLMAKL 154
Query: 81 LSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDE 140
EL+R ++ ++ + +D GY + ++ N + +P++I D++ D
Sbjct: 155 FQELHRHSDFPFEVKFIVMD---PGYSTANRNVIEENARKLKIPIEIFE-SDIF----DS 206
Query: 141 IVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLS 200
+ + K+ C C RR L A L +KIA GH+ DD+ ET+L+ +L G +
Sbjct: 207 VYNI--EKSPCYLCARMRRGHLYNYAKSLGCNKIALGHHYDDVIETILMGMLYGAQIQTM 264
Query: 201 RCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------A 250
L +T +G + +P E +I + + L + C ++ +
Sbjct: 265 MPKLHSTNFEG-MELIRPLYLVREDDIK-AWRDYNGLHFIQCACKFTDTCTTCNNEENRS 322
Query: 251 YRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
R ++ I L++ P I KS EN I T
Sbjct: 323 KRVEIKQLIAKLKQTNPEVEKHIFKSVENVNIDT 356
>gi|402313950|ref|ZP_10832858.1| PP-loop family protein [Lachnospiraceae bacterium ICM7]
gi|400365320|gb|EJP18375.1| PP-loop family protein [Lachnospiraceae bacterium ICM7]
Length = 382
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
Query: 27 KRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR 86
KR + +E+ + F + + I +L K G++IA+ SGGKDS ++A + EL +
Sbjct: 109 KRSRDIERSIIKKFRKSIWRKFTAAINEYELIKDGDKIAVCISGGKDSMLMAKLFQELLK 168
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIG 146
+L L ++ GY D + QT+ N +P+ +V +Y ++
Sbjct: 169 HGKRNFELVFLVMN---PGYDDINYQTIVDNAKILDVPI-VVFESSIYDIVAED------ 218
Query: 147 LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT 206
K+ C C RR L A L +KIA GH+ DD+ ET+++ +L G + L +
Sbjct: 219 EKSPCYLCARMRRGHLYAKAKELGCNKIALGHHFDDVIETIVMGMLYGAQIQTMMPKLHS 278
Query: 207 TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------AYRGFAR 256
T +G + +P Y +E + +A + L++ C + N + R +
Sbjct: 279 TNFEG-MELIRPL-YLVREEDIIHWAKYNELNFIRCACRLTDNCSISETGDKGSMRAEVK 336
Query: 257 EFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ I++L P +I +S EN + T + G
Sbjct: 337 KLIRELAAKNPYIEKNIFRSVENVSLDTVIAYKKNGV 373
>gi|375107550|ref|ZP_09753811.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderiales bacterium JOSHI_001]
gi|374668281|gb|EHR73066.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderiales bacterium JOSHI_001]
Length = 312
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 19/268 (7%)
Query: 24 AALKRPKTLEQICRECFYEV------FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVL 77
AAL+ +T Q ++ +E ++ Q I + +AG+++ + SGGKDS L
Sbjct: 8 AALEATRTDTQAEKKAAFEANKLSKRLHRQVGQAITDFNMIEAGDKVMVCLSGGKDSYAL 67
Query: 78 AFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWT 137
+L L +R DL +++D+ G+ + + R G+P I +D Y
Sbjct: 68 LDILLNLQKRAPIRFDLVAVNLDQKQPGF---PAEVLPRYLESLGVPFHI-ENQDTY--- 120
Query: 138 MDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGD 195
IVK + K C+ C RR L R A L KIA GH+ DD+ T+L+N+ G
Sbjct: 121 --SIVKRLIPEGKTLCSLCSRLRRGILYRVAGELGATKIALGHHRDDMVVTLLMNMFFG- 177
Query: 196 IARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFA 255
+R+ +DG +P Y E ++ A+ + + C N R
Sbjct: 178 -SRMKGMPPKLVSDDGKNVVIRPLAYVAETDLERWAAHRQFPIIPCSLCGSQDNLQRVQI 236
Query: 256 REFIKDLERLRPRAILDIIKSGENFRIS 283
++ I+D +R P I ++ + N +S
Sbjct: 237 KQMIRDWDRQHPGRIDNMFSAMGNITLS 264
>gi|300692819|ref|YP_003753814.1| ATP pyrophosphatase [Ralstonia solanacearum PSI07]
gi|299079879|emb|CBJ52557.1| putative ATP pyrophosphatase [Ralstonia solanacearum PSI07]
Length = 312
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
+ ++ + I ++ + G+ + + SGGKDS + VL L +R L +++D+
Sbjct: 14 LQSQVGRAIGDFKMIEGGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQ 73
Query: 104 SGYRDDSLQT-VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
G+ +D L T +K+ ++Y ++ D Y + KV K C+ C RR +
Sbjct: 74 PGFPEDVLPTYLKKLGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVI 125
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R A L KIA GH+ DDI T LN+ G + L T D + R P Y
Sbjct: 126 YRTAKELGASKIALGHHRDDIVNTFFLNMFFGGKMKSMPPKLATDNGDHIVIR--PLAYC 183
Query: 223 YEKEIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EK+I AY + +++ C N R +E + + ER P I +I + +N
Sbjct: 184 AEKDIA---AYARAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQTPGRIDNIFSALQN 240
>gi|365834229|ref|ZP_09375676.1| PP-loop family protein [Hafnia alvei ATCC 51873]
gi|364570177|gb|EHM47797.1| PP-loop family protein [Hafnia alvei ATCC 51873]
Length = 312
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + IV + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIVDYNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+D L + G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EDILPAYLDS---IGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DD+ +T+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDMLQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A + C PN R ++ ++D +R P I + + +N
Sbjct: 197 E-RFAEARAFPIIPCNLCGSQPNLQRQVIKDMLRDWDRRHPGRIETMFSAMQN 248
>gi|330818524|ref|YP_004362229.1| PP-loop family protein [Burkholderia gladioli BSR3]
gi|327370917|gb|AEA62273.1| PP-loop family protein [Burkholderia gladioli BSR3]
Length = 329
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 23 GRRALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 73
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R ++ +++D+ G+ + L R Q G+P I + +D
Sbjct: 74 DSYAMLDVLLRLRERAPIDFEIVAVNLDQKQPGFPEHVLPEYLR---QVGVPFHIEN-QD 129
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 130 TY-----SIVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 184
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 185 MFYG--GKLKGMPPKLQSDDGRNVVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 241
Query: 250 AYRGFAREFIKDLERLRP 267
R + I+D ++ P
Sbjct: 242 LKRAEMKALIRDWDKRFP 259
>gi|33603590|ref|NP_891150.1| C32 tRNA thiolase [Bordetella bronchiseptica RB50]
gi|410422067|ref|YP_006902516.1| hypothetical protein BN115_4294 [Bordetella bronchiseptica MO149]
gi|410474666|ref|YP_006897947.1| hypothetical protein BN117_4218 [Bordetella parapertussis Bpp5]
gi|412341086|ref|YP_006969841.1| hypothetical protein BN112_3805 [Bordetella bronchiseptica 253]
gi|427816601|ref|ZP_18983665.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427820091|ref|ZP_18987154.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427822683|ref|ZP_18989745.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|81579749|sp|Q7WEL6.1|TTCA_BORBR RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|33577715|emb|CAE34980.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408444776|emb|CCJ51551.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408449362|emb|CCJ61050.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408770920|emb|CCJ55719.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567601|emb|CCN25172.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410571091|emb|CCN19303.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410587948|emb|CCN02998.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 320
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E + I + +AG+++ + SGGKDS L +L L +R + ++ +++D+ G+
Sbjct: 32 ETTRAIADYNMIEAGDKVMVCLSGGKDSYALLDILLSLQKRAPFAFEIIAVNLDQKQPGF 91
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ L R G+P I + +D Y + +VI K C+ C RR L R
Sbjct: 92 PPEILPDYLR---ALGVPFHIET-QDTYSI----VTRVIPEGKTMCSLCSRLRRGILYRV 143
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
AS L KIA GH+ DDI T LN+ G A+ L++ +DG +P Y E
Sbjct: 144 ASELGATKIALGHHRDDILGTFFLNLFYGGKAKGMPPKLVS--DDGRHTVIRPLAYVPES 201
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP 267
+++ YA FK+ C N R I++ +R P
Sbjct: 202 DLI-AYAQFKQFPIIPCNLCGSQENLKRKEVGRMIQEWDRKHP 243
>gi|374307653|ref|YP_005054084.1| PP-loop family protein [Filifactor alocis ATCC 35896]
gi|320120350|gb|EFE28381.2| PP-loop family protein [Filifactor alocis ATCC 35896]
Length = 276
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
+ I+ ++ + +RIAI SGGKDS V+A ++ EL R + + +S++ G S +
Sbjct: 32 RAIIDFEMIQQNDRIAIAISGGKDSLVMAKLMQELYRHSDIPFEPVFISMNPGFSKENES 91
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
SL N +P+ D++ E+ I +N C C RR AL A L
Sbjct: 92 SLIA---NCKAMDIPVHFFQ-SDIF-----EVTTSIAKENPCYMCARMRRGALYGKAEEL 142
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+K+A GH+ +D+ ET ++N+L + L +T + + +P Y YE+ I
Sbjct: 143 GCNKLALGHHFNDVNETTIMNLLYTGCFKTMLPKLKSTNFNN-MEIIRPLYYVYEEHI-- 199
Query: 230 TYAYFKRLDYFSTEC 244
+ Y + F +C
Sbjct: 200 -HKYMNYIQIFPMDC 213
>gi|389576587|ref|ZP_10166615.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Eubacterium cellulosolvens 6]
gi|389312072|gb|EIM57005.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Eubacterium cellulosolvens 6]
Length = 396
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 22/283 (7%)
Query: 12 GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGG 71
G L + +R K +E+ R+ + + + I +L K G++IA+ SGG
Sbjct: 91 GQWLVHVMKEDAGNSERTKEIEKTLRKKYKHDIMGKFVKAITDYELVKPGDKIAVCISGG 150
Query: 72 KDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYK 131
KDS ++A + EL RR+ ++ L ++ GY + +L ++ N LPL + +
Sbjct: 151 KDSMLMAMLFKELKRRNKIPFEVVYLCMN---PGYSETTLGMIEGNAKLLDLPLTMFETR 207
Query: 132 DLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNI 191
D + + K+ C C RR L R A L +KIA GH+ DD+ ET L++I
Sbjct: 208 -----IFDAVDNIP--KSPCYICARMRRGYLYRKAQDLGCNKIALGHHYDDVIETTLMSI 260
Query: 192 LRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN-- 249
L + L +T G + +P E +I + + L + C ++
Sbjct: 261 LYSGQVQTMMPKLRSTNFKG-LELIRPLYLIREDDIK-DWRDYNGLQFIRCACHFTDTCS 318
Query: 250 --------AYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
+ R A++ I +++ P +I +S EN ++
Sbjct: 319 IDGHGGTGSKRVEAKQLIAQIKKTTPAVEGNIFRSMENISLNA 361
>gi|33598638|ref|NP_886281.1| C32 tRNA thiolase [Bordetella parapertussis 12822]
gi|81426044|sp|Q7W398.1|TTCA_BORPA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|33574767|emb|CAE39427.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 320
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E + I + +AG+++ + SGGKDS L +L L +R + ++ +++D+ G+
Sbjct: 32 ETTRAIADYNMIEAGDKVMVCLSGGKDSYALLDILLSLQKRAPFAFEIIAVNLDQKQPGF 91
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ L R G+P I + +D Y + +VI K C+ C RR L R
Sbjct: 92 PPEILPGYLR---ALGVPFHIET-QDTYSI----VTRVIPEGKTMCSLCSRLRRGILYRV 143
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
AS L KIA GH+ DDI T LN+ G A+ L++ +DG +P Y E
Sbjct: 144 ASELGATKIALGHHRDDILGTFFLNLFYGGKAKGMPPKLVS--DDGRHTVIRPLAYVPES 201
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP 267
+++ YA FK+ C N R I++ +R P
Sbjct: 202 DLI-AYAQFKQFPIIPCNLCGSQENLKRKEVGRMIQEWDRKHP 243
>gi|52425142|ref|YP_088279.1| C32 tRNA thiolase [Mannheimia succiniciproducens MBEL55E]
gi|81387134|sp|Q65TL6.1|TTCA_MANSM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|52307194|gb|AAU37694.1| MesJ protein [Mannheimia succiniciproducens MBEL55E]
Length = 312
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHN--YGLDLFLLSIDEGISG 105
+ I + + G+++ + SGGKDS L +L LN RHN D+ +++D+ G
Sbjct: 27 VGNAIADFNMIEDGDKVMVCLSGGKDSYTLLDIL--LNLRHNAPVHFDIVAVNLDQKQPG 84
Query: 106 YRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRG 165
+ + L + G+ KIV ++ YG ++I + K C+ C RR L R
Sbjct: 85 FPEHILPEYLSS---IGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRT 137
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DD+ ET+ LN+ G +L +DG +P Y EK
Sbjct: 138 ATELGATKIALGHHRDDMLETLFLNMFYG--GKLKSMPPKLVSDDGKQIVIRPLAYCKEK 195
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
+I YA K+ C PN R +E ++ +R P I + + +N S
Sbjct: 196 DIE-KYAVAKQFPIIPCNLCGSQPNLQRQVIKEMLQTWDRRYPGRIETMFSAIQNITPS 253
>gi|167749764|ref|ZP_02421891.1| hypothetical protein EUBSIR_00731 [Eubacterium siraeum DSM 15702]
gi|167657247|gb|EDS01377.1| PP-loop family protein [Eubacterium siraeum DSM 15702]
Length = 241
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I + + L + G++IA+G SGGKDS VL L+++ R + D+ ++ID G +G
Sbjct: 8 IRKAVQDFDLIQKGDKIAVGVSGGKDSLVLLAGLAQMRRFAEFDYDITAVTIDPGFNGV- 66
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGA 166
++ V R + +P +V + + EIV + N C+ C RR AL A
Sbjct: 67 PNNYDAVARLCEKLDVPFSLVHTQ------IGEIVFDIRKEPNPCSLCANMRRGALHDAA 120
Query: 167 SLLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
+K+A GHN DD+ ET ++N+ G I S T + + I +P E
Sbjct: 121 KAAGCNKLALGHNNDDVIETFIMNLFNEGRIGCFSPKTHLDRKD---ITVIRPLVLAPES 177
Query: 226 EIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
+++ + L+ + C R +EF++D+E
Sbjct: 178 QVL-SACNRNNLEIVKSVCPADKTTSRQKTKEFLRDMEH 215
>gi|284007458|emb|CBA72913.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 324
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 11/232 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + +RI + SGGKDS L +L L + LF +++D+ G+ D
Sbjct: 44 QAIADFSMIEDNDRIMVCLSGGKDSYTLLSILQNLQKSAPVNFTLFAINLDQKQPGFPAD 103
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + + G+ +IV+ ++ Y + K+ K C+ C RR L R AS L
Sbjct: 104 ILPSYLD---KLGIEYQIVT-ENTYAIVKE---KIPAGKTTCSLCSRLRRGILYRTASEL 156
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI +TV LN+ G +L ++G +P Y EK+I
Sbjct: 157 GATKIALGHHRDDILQTVFLNMFYG--GKLKGMPPKLMSDNGKHIVIRPLAYCREKDIAH 214
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
YA K C PN R +++ ++ P I + ++ +N
Sbjct: 215 -YAKIKEFPIIPCNLCGSQPNLQRQVIGNMLREWDKQYPGRIETMFQAMQNI 265
>gi|237808949|ref|YP_002893389.1| PP-loop domain-containing protein [Tolumonas auensis DSM 9187]
gi|259550668|sp|C4L8F7.1|TTCA_TOLAT RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|237501210|gb|ACQ93803.1| PP-loop domain protein [Tolumonas auensis DSM 9187]
Length = 302
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 19/242 (7%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
I Q I + + G+R+ + SGGKDS + +L L D+ +++D+ G+
Sbjct: 22 HIGQAIADFNMIEEGDRVMVCLSGGKDSFAMLDILRNLQASAPINFDIVAVNLDQKQPGF 81
Query: 107 RDDSLQTVKRNEIQY----GLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
+ L QY G+ KIV +D Y ++I + K C+ C RR L
Sbjct: 82 PPEVLP-------QYLDSIGVEYKIVE-EDTYSIVKEKIPEG---KTTCSLCSRLRRGIL 130
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R AS L KIA GH+ DDI ET++LN+ +L +DG +P Y
Sbjct: 131 YRTASELGATKIALGHHRDDILETLMLNMFYA--GKLKAMPPKLVSDDGKHVVIRPLAYC 188
Query: 223 YEKEIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFR 281
+EK+++ YA +K C N R +E + + +R P I + + +N
Sbjct: 189 HEKDLI-RYAEWKEFPIIPCNLCGSQENLQRKAMKEMLNEWDRRFPGRIETMFNAIQNIT 247
Query: 282 IS 283
S
Sbjct: 248 PS 249
>gi|291531576|emb|CBK97161.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Eubacterium siraeum 70/3]
Length = 241
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I + + L + G+RIA+G SGGKDS VL L+++ R + D+ ++ID G +G
Sbjct: 8 IRKAVQDFDLIQKGDRIAVGVSGGKDSLVLLAGLAQMRRFAEFDYDITAVTIDPGFNGV- 66
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV-KVIGLKNNCTFCGVFRRQALDRGA 166
++ + V R + +P +V + + EIV + N C+ C RR AL A
Sbjct: 67 PNNYEAVARLCEKLDVPFSLVHTQ------IGEIVFDIRKEPNPCSLCANMRRGALHDAA 120
Query: 167 SLLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
+K+A GHN DD+ ET ++N+ G I S T + + I +P E
Sbjct: 121 KAAGCNKLALGHNNDDVIETFIMNLFNEGRIGCFSPKTHLDRKD---ITVIRPLVLAPES 177
Query: 226 EIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 264
+++ + + + C R +EF++D+E
Sbjct: 178 QVL-SACNRNGFEIIKSVCPADKTTTRQKTKEFLRDMEH 215
>gi|82701643|ref|YP_411209.1| C32 tRNA thiolase [Nitrosospira multiformis ATCC 25196]
gi|123545035|sp|Q2YBQ4.1|TTCA_NITMU RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|82409708|gb|ABB73817.1| tRNA s(2)C-32 sulfurtransferase [Nitrosospira multiformis ATCC
25196]
Length = 298
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 51 VIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDS 110
I + ++G+R+ + SGGKDS L +L L +L +++D+ G+ +
Sbjct: 30 AIADFNMIESGDRVMVCLSGGKDSYALLDILRSLQAHAATQFELIAVNLDQKQPGFPEHV 89
Query: 111 LQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLK 170
L + G+P +IV +D Y I + K C+ C RR L R A L
Sbjct: 90 LPNYLTS---IGMPFRIVE-QDTYSVVKRLIPEG---KTTCSLCSRLRRGVLYRVADELG 142
Query: 171 VDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFT 230
KIA GH+ DDI ET+LLN+ G + L++ +DG +P Y EK++
Sbjct: 143 ATKIALGHHRDDILETLLLNLFHGGKLKTMPPKLVS--DDGKHIVIRPLAYCKEKDLA-A 199
Query: 231 YAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
YA + C N R +E ++ ++ P + ++ S +N + S
Sbjct: 200 YAEMENFPIIPCNLCGSQKNMQRQVVKEMLQQWDKKFPGRLENMFSSLQNIQPS 253
>gi|83745936|ref|ZP_00942992.1| tRNA s2C32 biosynthesis protein TtcA [Ralstonia solanacearum UW551]
gi|207742047|ref|YP_002258439.1| cog0037, predicted atpase of the pp-loop superfamily protein
[Ralstonia solanacearum IPO1609]
gi|386334846|ref|YP_006031017.1| atpase of the pp-loop superfamily protein [Ralstonia solanacearum
Po82]
gi|421887778|ref|ZP_16318919.1| putative ATP pyrophosphatase [Ralstonia solanacearum K60-1]
gi|421899687|ref|ZP_16330050.1| cog0037, predicted atpase of the pp-loop superfamily protein
[Ralstonia solanacearum MolK2]
gi|83727330|gb|EAP74452.1| tRNA s2C32 biosynthesis protein TtcA [Ralstonia solanacearum UW551]
gi|206590893|emb|CAQ56505.1| cog0037, predicted atpase of the pp-loop superfamily protein
[Ralstonia solanacearum MolK2]
gi|206593433|emb|CAQ60360.1| cog0037, predicted atpase of the pp-loop superfamily protein
[Ralstonia solanacearum IPO1609]
gi|334197296|gb|AEG70481.1| predicted atpase of the pp-loop superfamily protein [Ralstonia
solanacearum Po82]
gi|378966883|emb|CCF95667.1| putative ATP pyrophosphatase [Ralstonia solanacearum K60-1]
Length = 312
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
+ ++ + I ++ + G+ + + SGGKDS + VL L +R L +++D+
Sbjct: 14 LQSQVGRAIGDFKMIEDGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQ 73
Query: 104 SGYRDDSLQT-VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
G+ +D L +K+ ++Y ++ D Y + KV K C+ C RR +
Sbjct: 74 PGFPEDVLPNYLKKVGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVI 125
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R A L +KIA GH+ DDI T LN+ G + L T D + R P Y
Sbjct: 126 YRTAKELGANKIALGHHRDDIVNTFFLNMFFGGKMKAMPPKLATDNGDHIVIR--PLAYC 183
Query: 223 YEKEIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EKEI AY + +++ C N R +E + + ER P I +I + +N
Sbjct: 184 AEKEIA---AYARAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQAPGRIDNIFAALQN 240
>gi|262275723|ref|ZP_06053532.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Grimontia hollisae CIP
101886]
gi|262219531|gb|EEY70847.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Grimontia hollisae CIP
101886]
Length = 308
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+
Sbjct: 25 VGQAIADFNMIEDGDRIMVCLSGGKDSYTMLEILQSLQKSAPISFELVAVNLDQKQPGFP 84
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ KIV +D Y D+I + K C+ C RR L R A
Sbjct: 85 EHVLPEYLES---LGVEYKIVE-EDTYSIVKDKIPEG---KTTCSLCSRLRRGILYRTAK 137
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DD+ ET+ LN+ G + L++ ++G +P Y EK+I
Sbjct: 138 ELGATKIALGHHRDDMLETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDI 195
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA C PN R +E ++D ++ P I + ++ +N
Sbjct: 196 E-RYAEAAAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFRAMQN 247
>gi|238917758|ref|YP_002931275.1| hypothetical protein EUBELI_01839 [Eubacterium eligens ATCC 27750]
gi|238873118|gb|ACR72828.1| Hypothetical protein EUBELI_01839 [Eubacterium eligens ATCC 27750]
Length = 412
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 22/277 (7%)
Query: 27 KRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR 86
+R K +E+ + F + + Q + L + G++IA+ SGGKDS ++A + EL R
Sbjct: 119 ERVKEIERSIVKKFRKPIWRKFTQALNEYDLIQDGDKIAVCISGGKDSMLMAKLFQELKR 178
Query: 87 RHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIG 146
+L L ++ GY + + Q + N +P+ + + D + +
Sbjct: 179 HGKNNFELVFLVMN---PGYNNINYQVILNNAKILDIPITVFKSE-----IFDTVADI-- 228
Query: 147 LKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLIT 206
++ C C RR L A L +KIA GH+ DD+ ET+L+ +L G + L +
Sbjct: 229 EESPCYLCARMRRGYLYSKAKELGCNKIALGHHYDDVIETILMGMLYGAQIQTMMPKLHS 288
Query: 207 TGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------AYRGFAR 256
T +G + +P E +I+ Y L + C + + + RG +
Sbjct: 289 TNFEG-MELIRPLYLIREADIIHWRDY-NNLAFIQCACRLTESCASCGGTEKGSKRGEIK 346
Query: 257 EFIKDLERLRPRAILDIIKSGENFRISTSTKMPEQGT 293
+ IKDL ++ P +I +S EN + T + G
Sbjct: 347 QLIKDLTKVSPYIEKNIFRSVENVNLDTVIAYKQYGV 383
>gi|167626278|ref|YP_001676778.1| hypothetical protein Fphi_0057 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|205830350|sp|B0TY35.1|TTCA1_FRAP2 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA 1
gi|167596279|gb|ABZ86277.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 256
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 19/238 (7%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
I + I +L + G+++ + SGGKDS L VL L Y +DL + ++D+ G+
Sbjct: 17 ITKAIADYKLIEKGDKVMLCLSGGKDSFGLLKVLHGLIEDKTYDIDLHVYTLDQSQPGWD 76
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
D L+ N G+ +I + K+ YG +D KV K C+ C RR + R A
Sbjct: 77 DSQLRKYLDN---LGVSYEIET-KNTYGVVID---KVPEGKTYCSLCSRLRRGNIYRYAK 129
Query: 168 LLKVDKIATGHNADDIAETVLLNIL-RGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKE 226
K+DKI GH+ DD+ E++L++IL +G I + + GE+ I +P E++
Sbjct: 130 EHKMDKIILGHHRDDLIESLLMSILYQGQIKSMPPKFITQDGENTVI---RPMVLVQERD 186
Query: 227 IMFTYAYFKRLDYFS----TECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENF 280
++ F + + F C N R ++ I+DL P+ +I+ S N
Sbjct: 187 LI----EFAKEENFPIIPCNLCGSQENLKRKKVKKLIQDLAHENPKVPSNILNSLSNV 240
>gi|50120922|ref|YP_050089.1| C32 tRNA thiolase [Pectobacterium atrosepticum SCRI1043]
gi|81645225|sp|Q6D5P6.1|TTCA_ERWCT RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|49611448|emb|CAG74896.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSFTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L N G+ KIV ++ YG D+I + K C+ C RR L R A+
Sbjct: 86 EHILPQYLDN---IGVEYKIVE-ENTYGIVKDKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A ++ C PN R ++ ++D ++ P I + + +N
Sbjct: 197 E-RFAEARQYPIIPCNLCGSQPNLQRQVIKDMLRDWDKRHPGRIETMFSAMQN 248
>gi|307731306|ref|YP_003908530.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585841|gb|ADN59239.1| PP-loop domain protein [Burkholderia sp. CCGE1003]
Length = 324
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 15/267 (5%)
Query: 16 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDST 75
++ ++K+ L R + E ++ ++ Q I + + G+++ + SGGKDS
Sbjct: 10 ATSAARQKSPLTRREQKEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSY 69
Query: 76 VLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYG 135
+ +L L R D+ +++D+ G+ + L + Q +P I + +D Y
Sbjct: 70 AMLDILMRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QLDIPFHIEN-QDTYS 125
Query: 136 WTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILR 193
IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN+
Sbjct: 126 -----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFY 180
Query: 194 GDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPNAYR 252
G +L +DG +P Y E ++ YA + C PN R
Sbjct: 181 G--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPNLKR 237
Query: 253 GFAREFIKDLERLRPRAILDIIKSGEN 279
+ I+D E+ P I ++ + N
Sbjct: 238 AEMKALIRDWEKRFPGRIENMFNALSN 264
>gi|255525719|ref|ZP_05392651.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296184822|ref|ZP_06853233.1| PP-loop family protein [Clostridium carboxidivorans P7]
gi|255510621|gb|EET86929.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296050604|gb|EFG90027.1| PP-loop family protein [Clostridium carboxidivorans P7]
Length = 245
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
+ +F ++I Q I + ++G+R+A+G SGGKDS L F L + + H L ++I
Sbjct: 8 YNRMFLKKIIQSISKFNMIESGDRVAVGLSGGKDSVFLLFCLKLIQQTHIKDFSLMGVNI 67
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRR 159
D G+ + NEI P+ I+ ++ +E + K+ C+ C R+
Sbjct: 68 DMGLGMDMSPLINFCNENEI----PI-IIEKTNIAEVIFEERKE----KSPCSLCSKLRK 118
Query: 160 QALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPF 219
AL R A ++KIA GHN DD+ ET+ +N+L+ + +L ED + +P
Sbjct: 119 GALVRVAKANNINKIALGHNTDDVIETLFMNVLK--VGKLGAFHPNIYHEDNKMSIIRPM 176
Query: 220 KYTYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y E I L + C R + + LE + A IIKS +N
Sbjct: 177 IYLREPLIEKLVKDL-NLPVIKSLCPEDKKTTREEMKNLLFSLENIYEDAADKIIKSLDN 235
>gi|269139128|ref|YP_003295829.1| C32 tRNA thiolase [Edwardsiella tarda EIB202]
gi|387867741|ref|YP_005699210.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Edwardsiella tarda
FL6-60]
gi|267984789|gb|ACY84618.1| C32 tRNA thiolase [Edwardsiella tarda EIB202]
gi|304559054|gb|ADM41718.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Edwardsiella tarda
FL6-60]
Length = 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRVMVCLSGGKDSYTMLEILRNLQQSAPVNFTLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L + G+ +IV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 ETVLPAYLETQ---GVEYRIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAN 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L+ +KIA GH+ DD+ ET+ LN+ G +L +DG +P Y EK+I
Sbjct: 139 ELRCNKIALGHHRDDMLETLFLNMFYG--GKLKGMPPKLMSDDGQHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A K C PN R +E ++D ++ P I + + +N
Sbjct: 197 E-RFAAAKAFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGRIETMFSAMQN 248
>gi|116690998|ref|YP_836621.1| C32 tRNA thiolase [Burkholderia cenocepacia HI2424]
gi|205830563|sp|A0KB51.1|TTCA_BURCH RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|116649087|gb|ABK09728.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia cenocepacia HI2424]
Length = 331
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 24 GRPALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 243 LKRAEMKALIREWDKRFP 260
>gi|107023912|ref|YP_622239.1| C32 tRNA thiolase [Burkholderia cenocepacia AU 1054]
gi|123371203|sp|Q1BSY9.1|TTCA_BURCA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|105894101|gb|ABF77266.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia cenocepacia AU 1054]
Length = 326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 19 GRPALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 69
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 70 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 125
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 126 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 180
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 181 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 237
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 238 LKRAEMKALIREWDKRFP 255
>gi|358068492|ref|ZP_09154954.1| hypothetical protein HMPREF9333_01835 [Johnsonella ignava ATCC
51276]
gi|356693309|gb|EHI54988.1| hypothetical protein HMPREF9333_01835 [Johnsonella ignava ATCC
51276]
Length = 379
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 25 ALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSEL 84
A KR K +E+ + F + + + I +L + G+RIA+ SGGKDS ++A + EL
Sbjct: 105 AEKRYKDIERSIIKKFRKEIWRKFTRAINEYRLIENGDRIAVCISGGKDSMLMAKLFQEL 164
Query: 85 NRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKV 144
+ L ++ GY + + TV N +PL++ S EI +
Sbjct: 165 LKHGKNNFSAVFLVMN---PGYNELNYNTVIENAKLLNIPLEVFS---------SEIFDI 212
Query: 145 IGLKNN--CTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRC 202
+ ++N C C RR L A L +KIA GH+ DD+ ET+++ +L G +
Sbjct: 213 VASQDNSPCYLCARMRRGYLYSYAKQLGCNKIALGHHFDDVIETIVMGMLYGAQIQTMMP 272
Query: 203 TLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN----------AYR 252
L +T +G + +P EK+I+ +A + L + C + + + R
Sbjct: 273 KLHSTNFEG-MQLIRPMYLIREKDII-HWASYNNLHFIQCACRLTESCVSCGGSGQGSKR 330
Query: 253 GFAREFIKDLERLRPRAILDIIKSGENFRIST 284
G + I +L P +I +S EN ++T
Sbjct: 331 GEIKTLINELAAKNPYIEKNIFRSVENINLNT 362
>gi|238758667|ref|ZP_04619842.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia aldovae
ATCC 35236]
gi|238703178|gb|EEP95720.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia aldovae
ATCC 35236]
Length = 314
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQNLQKSAPINFTLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ +IV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLNKQ---GVEYQIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHVVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A K C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFALAKEYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|225419721|ref|ZP_03762024.1| hypothetical protein CLOSTASPAR_06059 [Clostridium asparagiforme
DSM 15981]
gi|225041631|gb|EEG51877.1| hypothetical protein CLOSTASPAR_06059 [Clostridium asparagiforme
DSM 15981]
Length = 240
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q + + + G+R+A+G SGGKDS L + LS L + + DL +++D G+ D
Sbjct: 12 QAVDHYNMIEEGDRVALGMSGGKDSLTLLYALSHLQKFYPKRFDLCAITVDLGLGNLELD 71
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
++ + ++ +P ++V + G + E K N C+ C R+ AL+ A
Sbjct: 72 PIRALCE---EFAVPYEVVPTQ--IGKVLFETRKE---SNPCSLCAKMRKGALNNKALEF 123
Query: 170 KVDKIATGHNADDIAETVLLNIL-RGDIARLS-RCTLITTGEDGPIPRCKPFKYTYEKEI 227
+K+A H+ DD+ ET L++++ G S R L TG + +P Y E E+
Sbjct: 124 GCNKVAYAHHRDDLIETALMSLIYEGHFYAFSPRTKLDRTG----LTVIRPLLYASEAEV 179
Query: 228 M-FTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
+ F Y L C + R + + I+DL+R P
Sbjct: 180 VGFKNKY--HLPVCKNPCPMDGHTKREYVKNLIRDLQRDNP 218
>gi|33594173|ref|NP_881817.1| C32 tRNA thiolase [Bordetella pertussis Tohama I]
gi|384205474|ref|YP_005591213.1| hypothetical protein BPTD_3232 [Bordetella pertussis CS]
gi|408414401|ref|YP_006625108.1| hypothetical protein BN118_0350 [Bordetella pertussis 18323]
gi|81424444|sp|Q7VU56.1|TTCA_BORPE RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|33564248|emb|CAE43539.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383588|gb|AEE68435.1| hypothetical protein BPTD_3232 [Bordetella pertussis CS]
gi|401776571|emb|CCJ61775.1| conserved hypothetical protein [Bordetella pertussis 18323]
Length = 320
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 47 EIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGY 106
E + I + +AG+++ + SGGKDS L +L L +R + ++ +++D+ G+
Sbjct: 32 ETTRAIADYNMIEAGDKVMVCLSGGKDSYALLDILLSLQKRAPFAFEIIAVNLDQKQPGF 91
Query: 107 RDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL-KNNCTFCGVFRRQALDRG 165
+ L R G+P I + +D Y + +VI K C+ C RR L R
Sbjct: 92 PPEILPDYLR---ALGVPFHIET-QDTYSI----VTRVIPEGKTMCSLCSRLRRGILYRV 143
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
AS L KIA GH+ DDI T LN+ G A+ L++ +DG +P Y E
Sbjct: 144 ASELGATKIALGHHRDDILGTFFLNLFYGGKAKGMPPKLVS--DDGRHTVIRPLVYVPES 201
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP 267
+++ YA FK+ C N R I++ +R P
Sbjct: 202 DLI-AYAQFKQFPIIPCNLCGSQENLKRKEVGRMIQEWDRKHP 243
>gi|355673551|ref|ZP_09059026.1| hypothetical protein HMPREF9469_02063 [Clostridium citroniae
WAL-17108]
gi|354814264|gb|EHE98864.1| hypothetical protein HMPREF9469_02063 [Clostridium citroniae
WAL-17108]
Length = 293
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
++ + G+++A+ SGGKDS +LA L +L R+ + DL + +D GY D+ + ++
Sbjct: 37 KMIQDGDKVAVCISGGKDSMLLAKCLQQLKRQSDTEFDLEFIVMD---PGYHPDNRRMIQ 93
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P++I D++ D +V V ++ C C RR L A L +KIA
Sbjct: 94 DNAALMNIPIRIFD-ADIF----DIVVDVD--QSPCYLCARMRRGYLYSHARELGCNKIA 146
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+L+ IL G L +T +G + +P Y E++I+ +
Sbjct: 147 LGHHFDDVIETILMGILYGGQINTMMPKLHSTNFEG-MELIRPLYYVKEEDIL-AWRSCN 204
Query: 236 RLDYFSTECIYSPN--------------------AYRGFAREFIKDLERLRPRAILDIIK 275
L + C ++ + R +E I+ L + P +I+K
Sbjct: 205 GLHFLQCACRFTEQIAREQAAGGMDGAAADIVHTSKRQEMKELIRSLRKNSPFVDSNIMK 264
Query: 276 SGENFRIST 284
S EN +
Sbjct: 265 SVENINLDA 273
>gi|344168086|emb|CCA80349.1| putative ATP pyrophosphatase [blood disease bacterium R229]
Length = 312
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
+ ++ + I ++ + G+ + + SGGKDS + VL L +R L +++D+
Sbjct: 14 LQSQVGRAIGDFKMIEGGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQ 73
Query: 104 SGYRDDSLQT-VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
G+ +D L T +K+ ++Y ++ D Y + KV K C+ C RR +
Sbjct: 74 PGFPEDVLPTYLKKLGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVI 125
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R A L KIA GH+ DDI T LN+ G + L T D + R P Y
Sbjct: 126 YRTAKELGASKIALGHHRDDIVNTFFLNMFFGGKMKSMPPKLATDNGDHIVIR--PLAYC 183
Query: 223 YEKEIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EK+I AY + +++ C N R +E + + ER P I I + +N
Sbjct: 184 AEKDIA---AYARAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQTPGRIDSIFSALQN 240
>gi|240146321|ref|ZP_04744922.1| PP-loop family protein [Roseburia intestinalis L1-82]
gi|257201562|gb|EEU99846.1| PP-loop family protein [Roseburia intestinalis L1-82]
Length = 244
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
QL ++G++IAIG SGGKDS L + LS L R + DL +++D GY + L V
Sbjct: 18 QLIESGDKIAIGISGGKDSLTLLYALSGLRRFYPQKFDLVAVTVD---LGYENFDLTAVS 74
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNN----CTFCGVFRRQALDRGASLLKV 171
+ +P IV+ EI K++ + N C+ C R+ AL++ L
Sbjct: 75 KLCHDLDVPYHIVN---------TEIAKILFEERNEKPTCSLCAKMRKGALNQAIKELGC 125
Query: 172 DKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM-FT 230
+K+A H+ DD+ ET L+++ R T ED + +P Y E E+ F
Sbjct: 126 NKVAYAHHMDDVIETAFLSMIFE--GRFYVFPPKTYMEDSDLTIIRPLIYVSEAEVKGFR 183
Query: 231 YAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERLRP 267
Y L C N R + ++ I+ L P
Sbjct: 184 NKY--PLPVVKNPCPMDGNTKREYVKKLIQQLNIDNP 218
>gi|153003817|ref|YP_001378142.1| C32 tRNA thiolase [Anaeromyxobacter sp. Fw109-5]
gi|205830553|sp|A7H8W2.1|TTCA_ANADF RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|152027390|gb|ABS25158.1| PP-loop domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 303
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L G+RI + SGGKDS L VL L R DL +++D+G GY + V+
Sbjct: 36 ELIGDGDRIMVAVSGGKDSYTLLHVLMRLRERAPIDFDLVAVNLDQGQPGY---PAEIVE 92
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
R+ G+P +++ Y D Y IV+ V K C C RR L A+ + K
Sbjct: 93 RHFQAVGVPHRML-YADTY-----SIVRRLVPEGKTTCPVCSRLRRGVLYNAAAEMGCTK 146
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DD+ ET+LL+ L L +DG +P Y E++I +A
Sbjct: 147 IALGHHRDDLVETLLLSALYS--GALKSMPPKLRSDDGRNVVVRPLCYAAEEDIA-AFAT 203
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP 267
R + C PN R + + +L P
Sbjct: 204 AMRFPIVPCDLCGSQPNLRRKRVKALLAELSDEHP 238
>gi|421497841|ref|ZP_15944989.1| hypothetical protein B224_001786 [Aeromonas media WS]
gi|407183164|gb|EKE57073.1| hypothetical protein B224_001786 [Aeromonas media WS]
Length = 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G++I + SGGKDS + +L L DL +++D+ G+
Sbjct: 24 VGQAIADFNMIEEGDKIMVCLSGGKDSFAMLDILMSLKASAPIHFDLVAVNLDQKQPGFP 83
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ + + G+ KIV +D Y D KV K C C RR L R A
Sbjct: 84 E---HVLPEYLVTLGVDFKIVE-EDTYSIVKD---KVPEGKTTCALCSRLRRGILYRTAQ 136
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI ET+ LN+ G +L +DG +P Y EK++
Sbjct: 137 ELGCTKIALGHHRDDILETLFLNMFYG--GKLKSMPPKLVSDDGKNVVIRPLAYCKEKDL 194
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRP-------RAILDIIKS 276
+ YA K C N R ++ ++D +R P AI D+I S
Sbjct: 195 V-RYAEVKAFPIIPCNLCGSQENLQRKAIKQMMQDWDRRFPGRIETMFTAIQDVIPS 250
>gi|385207530|ref|ZP_10034398.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. Ch1-1]
gi|385179868|gb|EIF29144.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. Ch1-1]
Length = 339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 15/260 (5%)
Query: 23 KAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLS 82
K+ L R + E ++ ++ + IV + + G+++ + SGGKDS + +L
Sbjct: 32 KSPLTRREQKEAYENNKLFKRLARQVGEAIVDFNMIEDGDKVMVCLSGGKDSYAMLEILM 91
Query: 83 ELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIV 142
L R D+ +++D+ G+ + L + Q +P I + +D Y IV
Sbjct: 92 RLRERAPINFDIVAVNLDQKQPGFPEHVLPEYLK---QLDIPFHIEN-QDTYS-----IV 142
Query: 143 K--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLS 200
K V K C+ C RR L R A L KIA GH+ DDI +T+LLN+ G +L
Sbjct: 143 KRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYG--GKLK 200
Query: 201 RCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFI 259
+DG +P Y E ++ YA + C PN R + +
Sbjct: 201 GMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPNLKRAEMKALV 259
Query: 260 KDLERLRPRAILDIIKSGEN 279
+D E+ P I ++ + N
Sbjct: 260 RDWEKRFPGRIENMFNALSN 279
>gi|378824077|ref|ZP_09846625.1| PP-loop family protein [Sutterella parvirubra YIT 11816]
gi|378597106|gb|EHY30446.1| PP-loop family protein [Sutterella parvirubra YIT 11816]
Length = 307
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 17/242 (7%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I ++ + G+++ + SGGKDS VL L L R +L +++D+ I + +
Sbjct: 52 QAITDFKMIEEGDKVMVAMSGGKDSYVLLDALRILRERAPISFELVAVNVDQHIPQFPRE 111
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
+L+ R+ G+P I +D Y I + KN C+ C RR L R AS +
Sbjct: 112 ALE---RHLASTGVPYHIED-QDTYSIIQRLIPEG---KNVCSLCARLRRGILYRVASEM 164
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
+KIA GH+ DDI T++LN+ G R+ I +D +P Y E E
Sbjct: 165 GCNKIALGHHMDDIVGTLMLNLFYG--GRMKAMPPILRSDDKKNVVIRPLAYVREYE--- 219
Query: 230 TYAYFKRLDYFSTE---CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRISTST 286
T Y K Y C N R +E I+ +R P I ++ S + R+S S
Sbjct: 220 TEKYAKAKGYPLAAKGICGAGENLKRQEIKELIRSWDREFPGRIYNMFMSLQ--RVSPSH 277
Query: 287 KM 288
M
Sbjct: 278 LM 279
>gi|213647076|ref|ZP_03377129.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 268
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|254247003|ref|ZP_04940324.1| PP-loop [Burkholderia cenocepacia PC184]
gi|124871779|gb|EAY63495.1| PP-loop [Burkholderia cenocepacia PC184]
Length = 331
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 24 GRPALTRREQKEAYENNKLFKRIVRQ---------VGQAIGDYNMIEQGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 243 LKRAEMKALIREWDKRFP 260
>gi|317055588|ref|YP_004104055.1| PP-loop domain-containing protein [Ruminococcus albus 7]
gi|315447857|gb|ADU21421.1| PP-loop domain protein [Ruminococcus albus 7]
Length = 294
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
L + G+RIA+ SGGKDS ++A + L R ++ L +D GY + + Q +
Sbjct: 36 LIQEGDRIAVCISGGKDSMLMALCMKRLQRYSKVPFEVVFLVMD---PGYNEINYQKIVE 92
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
N +P+++ D + KV ++ C C RR L + A L +KIA
Sbjct: 93 NAETLEIPIQVFK-----TGIFDAVAKVD--EHPCYLCARMRRGHLYKTAKELGCNKIAL 145
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ ET+L+ +L G + + + +G + +P E +I+ + +
Sbjct: 146 GHHFDDVIETILMGMLYGSQVQTMMPKIHSENYEG-MQLIRPMYMVREADII-RWKQYND 203
Query: 237 LDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L + C ++ N + R + +K L + P +I +S EN + T
Sbjct: 204 LQFIQCACRFTENCTMCDNGGGGSKRQEIKNLLKQLRAVNPAVDKNIFRSVENVNLQT 261
>gi|51596578|ref|YP_070769.1| C32 tRNA thiolase [Yersinia pseudotuberculosis IP 32953]
gi|186895636|ref|YP_001872748.1| C32 tRNA thiolase [Yersinia pseudotuberculosis PB1/+]
gi|81639280|sp|Q66A78.1|TTCA_YERPS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830673|sp|B2K5E0.1|TTCA_YERPB RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|51589860|emb|CAH21492.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186698662|gb|ACC89291.1| PP-loop domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFSLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVI--GLKNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPDGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAVAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|365540682|ref|ZP_09365857.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio ordalii ATCC
33509]
Length = 310
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPVSFELIAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L Q G+ KIV +D Y D+I + K C+ C RR L R A L
Sbjct: 89 ILPQYLE---QLGVEYKIVE-EDTYSIVQDKIPEG---KTTCSLCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKIKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA + C PN R ++ + ++ P I + + +N
Sbjct: 199 KYANMREYPIIPCNLCGSQPNMQRQNIKQMLNGWDKQFPGRIETMFSAMQN 249
>gi|225023480|ref|ZP_03712672.1| hypothetical protein EIKCOROL_00338 [Eikenella corrodens ATCC
23834]
gi|224943720|gb|EEG24929.1| hypothetical protein EIKCOROL_00338 [Eikenella corrodens ATCC
23834]
Length = 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 40 FYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSI 99
++ + Q I + + G++I + SGGKDS L +L L +L +++
Sbjct: 14 LHKRLRHAVGQAINDFNMIEEGDKIMVCLSGGKDSYALLDILRHLQASAPINFELVAVNL 73
Query: 100 DEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGV 156
D+ G+ + L + G+P KIV +D Y +DE K C+ C
Sbjct: 74 DQKQPGFPEHVLPEYLTS---IGVPFKIVE-EDTYSTVKRVLDEG------KTTCSLCSR 123
Query: 157 FRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRC 216
RR L R A L KIA GH+ DDI T+ LN+ G + L++ ++G
Sbjct: 124 LRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFYGGKLKAMPPKLVS--DNGEHIVI 181
Query: 217 KPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIK 275
+P Y EK+++ YA K+ C PN R E +KD ++ P I +
Sbjct: 182 RPLAYVKEKDLI-KYAEIKQFPIIPCNLCGSQPNLQRQVVGEMLKDWDKRFPGRIESMFS 240
Query: 276 SGEN 279
+ +N
Sbjct: 241 ALQN 244
>gi|161613875|ref|YP_001587840.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|205830623|sp|A9MXN4.1|TTCA_SALPB RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|161363239|gb|ABX67007.1| hypothetical protein SPAB_01611 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|291535866|emb|CBL08978.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Roseburia intestinalis M50/1]
Length = 412
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 30 KTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR--R 87
K+L + R+ + F + +H ++ K G++IA+ SGGKDS +LA + EL R +
Sbjct: 145 KSLIKKFRKPIWSRFTKALHDY----EMIKDGDKIAVCISGGKDSMLLAKLFQELYRHGK 200
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL 147
N+GL ++ GY +++ + ++ N +PL + D + +V
Sbjct: 201 RNFGLVFLCMN-----PGYNEENWRIIQENAKLLDIPLTTFETQ-----IFDSVAEVD-- 248
Query: 148 KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITT 207
KN C C RR L A L +KIA GH+ DD+ ET+L+ +L L +
Sbjct: 249 KNPCYLCARMRRGYLYSKAKELGCNKIALGHHFDDVIETILMGMLYSGKVETMMPKLHSQ 308
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN-----AYRGFAREFIKDL 262
+G + +P Y ++E + + + RL + C ++ N +G RE +KDL
Sbjct: 309 NFEG-MELIRPL-YLVKEEDIKAWRDYNRLQFIQCACRFTENCTSCGGAKGSKREEMKDL 366
>gi|123442369|ref|YP_001006348.1| C32 tRNA thiolase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|205830671|sp|A1JND8.1|TTCA_YERE8 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|122089330|emb|CAL12178.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQNLQKSAPINFTLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHVVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAIAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|240145943|ref|ZP_04744544.1| PP-loop family protein [Roseburia intestinalis L1-82]
gi|257201930|gb|EEV00215.1| PP-loop family protein [Roseburia intestinalis L1-82]
Length = 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 30 KTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNR--R 87
K+L + R+ + F + +H ++ K G++IA+ SGGKDS +LA + EL R +
Sbjct: 148 KSLIKKFRKPIWSRFTKALHDY----EMIKDGDKIAVCISGGKDSMLLAKLFQELYRHGK 203
Query: 88 HNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL 147
N+GL ++ GY +++ + ++ N +PL + D + +V
Sbjct: 204 RNFGLVFLCMN-----PGYNEENWRIIQENAKLLDIPLTTFETQ-----IFDSVAEVD-- 251
Query: 148 KNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITT 207
KN C C RR L A L +KIA GH+ DD+ ET+L+ +L L +
Sbjct: 252 KNPCYLCARMRRGYLYSKAKELGCNKIALGHHFDDVIETILMGMLYSGKVETMMPKLHSQ 311
Query: 208 GEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTECIYSPN-----AYRGFAREFIKDL 262
+G + +P Y ++E + + + RL + C ++ N +G RE +KDL
Sbjct: 312 NFEG-MELIRPL-YLVKEEDIKAWRDYNRLQFIQCACRFTENCTSCGGAKGSKREEMKDL 369
>gi|420258478|ref|ZP_14761211.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404514028|gb|EKA27830.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQNLQKSAPINFTLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHVVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAIAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|269102678|ref|ZP_06155375.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268162576|gb|EEZ41072.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 309
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ I+ + + G+RI + SGGKDS + +L L R +L +++D+ G+
Sbjct: 26 VGNAIIDFNMIEDGDRIMVCLSGGKDSYAMLDILRSLQRSAPVKFELIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
D L G+ KIV+ +D Y ++I + K C+ C RR L R A
Sbjct: 86 DHILPEYLDT---LGVEYKIVN-EDTYSIVKEKIPEG---KTTCSLCSRLRRGILYRTAK 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
+ KIA GH+ DD+ ET+ LN+ G +L ++G +P Y EK+I
Sbjct: 139 EIGATKIALGHHRDDMLETLFLNMFYG--GKLKSMPPKLVSDNGEHVVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+A K C PN R ++ ++D +R P I + + +N
Sbjct: 197 E-RFAELKEFPIIPCNLCGSQPNLQRQVIKDMLRDWDRRYPGRIETMFTALQN 248
>gi|22125890|ref|NP_669313.1| C32 tRNA thiolase [Yersinia pestis KIM10+]
gi|45441914|ref|NP_993453.1| C32 tRNA thiolase [Yersinia pestis biovar Microtus str. 91001]
gi|108807679|ref|YP_651595.1| C32 tRNA thiolase [Yersinia pestis Antiqua]
gi|108811956|ref|YP_647723.1| C32 tRNA thiolase [Yersinia pestis Nepal516]
gi|145598114|ref|YP_001162190.1| C32 tRNA thiolase [Yersinia pestis Pestoides F]
gi|149365753|ref|ZP_01887788.1| hypothetical protein YPE_0928 [Yersinia pestis CA88-4125]
gi|153947235|ref|YP_001400777.1| C32 tRNA thiolase [Yersinia pseudotuberculosis IP 31758]
gi|162419399|ref|YP_001606655.1| C32 tRNA thiolase [Yersinia pestis Angola]
gi|165926443|ref|ZP_02222275.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938602|ref|ZP_02227158.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010640|ref|ZP_02231538.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210960|ref|ZP_02236995.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400851|ref|ZP_02306357.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422098|ref|ZP_02313851.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424807|ref|ZP_02316560.1| PP-loop family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467094|ref|ZP_02331798.1| PP-loop family protein [Yersinia pestis FV-1]
gi|170024151|ref|YP_001720656.1| C32 tRNA thiolase [Yersinia pseudotuberculosis YPIII]
gi|218929427|ref|YP_002347302.1| C32 tRNA thiolase [Yersinia pestis CO92]
gi|229837856|ref|ZP_04458015.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229895014|ref|ZP_04510192.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
Pestoides A]
gi|229898417|ref|ZP_04513564.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
biovar Orientalis str. India 195]
gi|229902264|ref|ZP_04517384.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
Nepal516]
gi|270490553|ref|ZP_06207627.1| PP-loop family protein [Yersinia pestis KIM D27]
gi|294503652|ref|YP_003567714.1| hypothetical protein YPZ3_1542 [Yersinia pestis Z176003]
gi|384122634|ref|YP_005505254.1| hypothetical protein YPD4_2044 [Yersinia pestis D106004]
gi|384125899|ref|YP_005508513.1| hypothetical protein YPD8_1435 [Yersinia pestis D182038]
gi|384139839|ref|YP_005522541.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
A1122]
gi|384414488|ref|YP_005623850.1| putative magnesium chelatase family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420547259|ref|ZP_15045174.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-01]
gi|420552588|ref|ZP_15049930.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-02]
gi|420558131|ref|ZP_15054790.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-03]
gi|420563614|ref|ZP_15059661.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-04]
gi|420568644|ref|ZP_15064227.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-05]
gi|420574310|ref|ZP_15069356.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-06]
gi|420579616|ref|ZP_15074174.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-07]
gi|420584957|ref|ZP_15079020.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-08]
gi|420590080|ref|ZP_15083630.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-09]
gi|420595480|ref|ZP_15088491.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-10]
gi|420601130|ref|ZP_15093525.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-11]
gi|420606560|ref|ZP_15098411.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-12]
gi|420611955|ref|ZP_15103268.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-13]
gi|420617316|ref|ZP_15107972.1| PP-loop family protein [Yersinia pestis PY-14]
gi|420622630|ref|ZP_15112717.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-15]
gi|420627721|ref|ZP_15117332.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-16]
gi|420632823|ref|ZP_15121928.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-19]
gi|420638037|ref|ZP_15126605.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-25]
gi|420643550|ref|ZP_15131614.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-29]
gi|420648788|ref|ZP_15136369.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-32]
gi|420654436|ref|ZP_15141443.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-34]
gi|420659913|ref|ZP_15146366.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-36]
gi|420665229|ref|ZP_15151130.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-42]
gi|420670117|ref|ZP_15155571.1| PP-loop family protein [Yersinia pestis PY-45]
gi|420675467|ref|ZP_15160437.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-46]
gi|420681059|ref|ZP_15165502.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-47]
gi|420686353|ref|ZP_15170226.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-48]
gi|420691565|ref|ZP_15174817.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-52]
gi|420697341|ref|ZP_15179879.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-53]
gi|420708597|ref|ZP_15189302.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-55]
gi|420714007|ref|ZP_15194138.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-56]
gi|420719485|ref|ZP_15198884.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-58]
gi|420725003|ref|ZP_15203689.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-59]
gi|420730613|ref|ZP_15208710.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-60]
gi|420735628|ref|ZP_15213251.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-61]
gi|420741111|ref|ZP_15218178.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-63]
gi|420746684|ref|ZP_15222958.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-64]
gi|420752256|ref|ZP_15227851.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-65]
gi|420757825|ref|ZP_15232459.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-66]
gi|420763316|ref|ZP_15237137.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-71]
gi|420768502|ref|ZP_15241806.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-72]
gi|420773531|ref|ZP_15246342.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-76]
gi|420779080|ref|ZP_15251251.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-88]
gi|420784659|ref|ZP_15256138.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-89]
gi|420789883|ref|ZP_15260797.1| PP-loop family protein [Yersinia pestis PY-90]
gi|420795386|ref|ZP_15265750.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-91]
gi|420800442|ref|ZP_15270289.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-92]
gi|420805838|ref|ZP_15275165.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-93]
gi|420811133|ref|ZP_15279940.1| PP-loop family protein [Yersinia pestis PY-94]
gi|420816701|ref|ZP_15284947.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-95]
gi|420821999|ref|ZP_15289720.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-96]
gi|420827086|ref|ZP_15294279.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-98]
gi|420832782|ref|ZP_15299430.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-99]
gi|420837642|ref|ZP_15303825.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-100]
gi|420842830|ref|ZP_15308523.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-101]
gi|420848478|ref|ZP_15313605.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-102]
gi|420854007|ref|ZP_15318361.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-103]
gi|420859337|ref|ZP_15322990.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-113]
gi|421763828|ref|ZP_16200620.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis INS]
gi|123072798|sp|Q1C7C2.1|TTCA_YERPA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|123073391|sp|Q1CIQ7.1|TTCA_YERPN RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|123777122|sp|Q7CIP8.1|TTCA_YERPE RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830672|sp|A7FHP9.1|TTCA_YERP3 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830674|sp|A9R8Q5.1|TTCA_YERPG RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830675|sp|A4TIV5.1|TTCA_YERPP RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830676|sp|B1JJU2.1|TTCA_YERPY RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|21958825|gb|AAM85564.1|AE013802_9 hypothetical protein y1998 [Yersinia pestis KIM10+]
gi|45436777|gb|AAS62330.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Yersinia pestis biovar Microtus str.
91001]
gi|108775604|gb|ABG18123.1| hypothetical protein YPN_1794 [Yersinia pestis Nepal516]
gi|108779592|gb|ABG13650.1| hypothetical protein YPA_1684 [Yersinia pestis Antiqua]
gi|115348038|emb|CAL20963.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209810|gb|ABP39217.1| hypothetical protein YPDSF_0811 [Yersinia pestis Pestoides F]
gi|149292166|gb|EDM42240.1| hypothetical protein YPE_0928 [Yersinia pestis CA88-4125]
gi|152958730|gb|ABS46191.1| PP-loop family protein [Yersinia pseudotuberculosis IP 31758]
gi|162352214|gb|ABX86162.1| PP-loop family protein [Yersinia pestis Angola]
gi|165913476|gb|EDR32097.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921664|gb|EDR38861.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990342|gb|EDR42643.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208140|gb|EDR52620.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958910|gb|EDR55931.1| PP-loop family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049704|gb|EDR61112.1| PP-loop family protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055994|gb|EDR65772.1| PP-loop family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169750685|gb|ACA68203.1| PP-loop domain protein [Yersinia pseudotuberculosis YPIII]
gi|229680599|gb|EEO76695.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
Nepal516]
gi|229688707|gb|EEO80776.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
biovar Orientalis str. India 195]
gi|229694222|gb|EEO84269.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229702109|gb|EEO90130.1| putative tRNA 2-thiocytidine (s(2)C32) synthase [Yersinia pestis
Pestoides A]
gi|262362230|gb|ACY58951.1| hypothetical protein YPD4_2044 [Yersinia pestis D106004]
gi|262365563|gb|ACY62120.1| hypothetical protein YPD8_1435 [Yersinia pestis D182038]
gi|270339057|gb|EFA49834.1| PP-loop family protein [Yersinia pestis KIM D27]
gi|294354111|gb|ADE64452.1| hypothetical protein YPZ3_1542 [Yersinia pestis Z176003]
gi|320014992|gb|ADV98563.1| putative magnesium chelatase family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342854968|gb|AEL73521.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
A1122]
gi|391425548|gb|EIQ87802.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-01]
gi|391427056|gb|EIQ89178.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-02]
gi|391427846|gb|EIQ89887.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-03]
gi|391440922|gb|EIR01448.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-04]
gi|391442570|gb|EIR02957.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-05]
gi|391445915|gb|EIR06003.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-06]
gi|391458112|gb|EIR17000.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-07]
gi|391458988|gb|EIR17806.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-08]
gi|391461154|gb|EIR19785.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-09]
gi|391474148|gb|EIR31461.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-10]
gi|391475616|gb|EIR32799.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-11]
gi|391476455|gb|EIR33570.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-12]
gi|391490092|gb|EIR45771.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-13]
gi|391491199|gb|EIR46780.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-15]
gi|391493156|gb|EIR48536.1| PP-loop family protein [Yersinia pestis PY-14]
gi|391505575|gb|EIR59575.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-16]
gi|391506461|gb|EIR60379.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-19]
gi|391510945|gb|EIR64402.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-25]
gi|391521475|gb|EIR73939.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-29]
gi|391523754|gb|EIR76039.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-34]
gi|391524762|gb|EIR76949.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-32]
gi|391536838|gb|EIR87783.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-36]
gi|391539572|gb|EIR90282.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-42]
gi|391541493|gb|EIR92028.1| PP-loop family protein [Yersinia pestis PY-45]
gi|391554633|gb|EIS03861.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-46]
gi|391555227|gb|EIS04411.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-47]
gi|391556389|gb|EIS05473.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-48]
gi|391569802|gb|EIS17345.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-52]
gi|391570637|gb|EIS18080.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-53]
gi|391583334|gb|EIS29001.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-55]
gi|391586322|gb|EIS31632.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-56]
gi|391597711|gb|EIS41512.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-58]
gi|391599410|gb|EIS43030.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-60]
gi|391601226|gb|EIS44667.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-59]
gi|391614065|gb|EIS55963.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-61]
gi|391614635|gb|EIS56481.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-63]
gi|391619073|gb|EIS60393.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-64]
gi|391626467|gb|EIS66812.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-65]
gi|391634361|gb|EIS73643.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-66]
gi|391637442|gb|EIS76361.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-71]
gi|391639944|gb|EIS78555.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-72]
gi|391649468|gb|EIS86852.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-76]
gi|391653766|gb|EIS90669.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-88]
gi|391658627|gb|EIS95013.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-89]
gi|391662523|gb|EIS98442.1| PP-loop family protein [Yersinia pestis PY-90]
gi|391670452|gb|EIT05485.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-91]
gi|391679853|gb|EIT13950.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-93]
gi|391681187|gb|EIT15170.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-92]
gi|391682002|gb|EIT15916.1| PP-loop family protein [Yersinia pestis PY-94]
gi|391693696|gb|EIT26420.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-95]
gi|391696936|gb|EIT29372.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-96]
gi|391698542|gb|EIT30833.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-98]
gi|391709037|gb|EIT40244.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-99]
gi|391714559|gb|EIT45202.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-100]
gi|391714979|gb|EIT45562.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-101]
gi|391725848|gb|EIT55262.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-102]
gi|391729199|gb|EIT58216.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-103]
gi|391734349|gb|EIT62613.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis
PY-113]
gi|411175142|gb|EKS45168.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Yersinia pestis INS]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFSLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAVAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|424658790|ref|ZP_18096041.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-16]
gi|408053982|gb|EKG88976.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-16]
Length = 310
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D KV K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYSIVQD---KVPEGKTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQVVKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|417373220|ref|ZP_12143306.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353603136|gb|EHC58312.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGIEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|336124233|ref|YP_004566281.1| TtcA [Vibrio anguillarum 775]
gi|335341956|gb|AEH33239.1| TtcA [Vibrio anguillarum 775]
Length = 310
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPVSFELIAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L Q G+ KIV +D Y D+I + K C+ C RR L R A L
Sbjct: 89 ILPQYLE---QLGVEYKIVE-EDTYSIVQDKIPEG---KTTCSLCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKIKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
YA + C PN R ++ + ++ P I + + +N
Sbjct: 199 KYANMREYPIIPCNLCGSQPNMQRQNIKQMLNGWDKQFPGRIETMFSAMQN 249
>gi|417539194|ref|ZP_12191551.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353664976|gb|EHD03244.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|56413420|ref|YP_150495.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168235782|ref|ZP_02660840.1| YdaO [Salmonella enterica subsp. enterica serovar Schwarzengrund
str. SL480]
gi|194735405|ref|YP_002114682.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197362343|ref|YP_002141980.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|204927784|ref|ZP_03218985.1| YdaO [Salmonella enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|238911960|ref|ZP_04655797.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|416424331|ref|ZP_11691587.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416432058|ref|ZP_11695999.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416440658|ref|ZP_11701085.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416445718|ref|ZP_11704546.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416449822|ref|ZP_11707034.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456920|ref|ZP_11711805.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416468656|ref|ZP_11718059.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416479306|ref|ZP_11722171.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416485765|ref|ZP_11724808.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499936|ref|ZP_11731079.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416509608|ref|ZP_11736739.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416511831|ref|ZP_11737453.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416525658|ref|ZP_11741779.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416538363|ref|ZP_11749338.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416541051|ref|ZP_11750737.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416551505|ref|ZP_11756544.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416559107|ref|ZP_11760553.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416579053|ref|ZP_11770911.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416585576|ref|ZP_11774942.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416593398|ref|ZP_11779867.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416598570|ref|ZP_11782921.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416608354|ref|ZP_11789348.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416614206|ref|ZP_11792539.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621091|ref|ZP_11796154.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416629336|ref|ZP_11800052.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638649|ref|ZP_11804078.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416651219|ref|ZP_11810984.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416666648|ref|ZP_11817681.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416682108|ref|ZP_11823923.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690566|ref|ZP_11825955.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416704208|ref|ZP_11830120.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712724|ref|ZP_11836410.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416719918|ref|ZP_11841723.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416724544|ref|ZP_11844964.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416734504|ref|ZP_11851063.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416737115|ref|ZP_11852411.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416743272|ref|ZP_11856098.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416758364|ref|ZP_11863673.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416762374|ref|ZP_11866350.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416768596|ref|ZP_11870634.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|417348953|ref|ZP_12127761.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417460112|ref|ZP_12164222.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|418485473|ref|ZP_13054455.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418487613|ref|ZP_13055922.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418496160|ref|ZP_13062595.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418499471|ref|ZP_13065878.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418502693|ref|ZP_13069062.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418506336|ref|ZP_13072669.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418527481|ref|ZP_13093438.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|452120165|ref|YP_007470413.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|81360568|sp|Q5PHS1.1|TTCA_SALPA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790145|sp|B5BJ71.1|TTCA_SALPK RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790146|sp|B4TWA6.1|TTCA_SALSV RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|56127677|gb|AAV77183.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194710907|gb|ACF90128.1| YdaO [Salmonella enterica subsp. enterica serovar Schwarzengrund
str. CVM19633]
gi|197093820|emb|CAR59303.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197291136|gb|EDY30489.1| YdaO [Salmonella enterica subsp. enterica serovar Schwarzengrund
str. SL480]
gi|204323126|gb|EDZ08322.1| YdaO [Salmonella enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|322614907|gb|EFY11832.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619347|gb|EFY16227.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623159|gb|EFY20001.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628448|gb|EFY25236.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634856|gb|EFY31587.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322638579|gb|EFY35274.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640886|gb|EFY37534.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645385|gb|EFY41913.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651730|gb|EFY48102.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654370|gb|EFY50692.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322661211|gb|EFY57437.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662661|gb|EFY58868.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322667728|gb|EFY63888.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322671860|gb|EFY67981.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677095|gb|EFY73159.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680243|gb|EFY76282.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685328|gb|EFY81324.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194309|gb|EFZ79505.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323199387|gb|EFZ84481.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204135|gb|EFZ89148.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323217186|gb|EGA01907.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220065|gb|EGA04533.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227264|gb|EGA11434.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232048|gb|EGA16155.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234575|gb|EGA18662.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238028|gb|EGA22087.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243371|gb|EGA27390.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246178|gb|EGA30163.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253679|gb|EGA37506.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323259112|gb|EGA42758.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323260420|gb|EGA44033.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266492|gb|EGA49979.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271216|gb|EGA54643.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|353574247|gb|EHC37348.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353632477|gb|EHC79522.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|363550595|gb|EHL34922.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363558691|gb|EHL42880.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363561888|gb|EHL46001.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363566449|gb|EHL50465.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363570410|gb|EHL54343.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363576314|gb|EHL60151.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366055363|gb|EHN19698.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366057407|gb|EHN21709.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366070653|gb|EHN34760.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366070963|gb|EHN35064.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366074417|gb|EHN38479.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366083334|gb|EHN47258.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366828101|gb|EHN54999.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372204950|gb|EHP18477.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|451909169|gb|AGF80975.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|238782626|ref|ZP_04626657.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia bercovieri
ATCC 43970]
gi|238716553|gb|EEQ08534.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia bercovieri
ATCC 43970]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFTLIAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 86 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 136
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 137 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 195 DIE-RFAVAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
>gi|168241213|ref|ZP_02666145.1| YdaO [Salmonella enterica subsp. enterica serovar Heidelberg str.
SL486]
gi|194447955|ref|YP_002045696.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|386591496|ref|YP_006087896.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|417341658|ref|ZP_12122655.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417383280|ref|ZP_12149015.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417530705|ref|ZP_12185778.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|419729687|ref|ZP_14256644.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419732373|ref|ZP_14259279.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419740206|ref|ZP_14266940.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419744595|ref|ZP_14271249.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419747895|ref|ZP_14274396.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421572332|ref|ZP_16017982.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421573997|ref|ZP_16019625.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421581613|ref|ZP_16027156.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421586820|ref|ZP_16032301.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|254790142|sp|B4TIS7.1|TTCA_SALHS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|194406259|gb|ACF66478.1| YdaO [Salmonella enterica subsp. enterica serovar Heidelberg str.
SL476]
gi|205339158|gb|EDZ25922.1| YdaO [Salmonella enterica subsp. enterica serovar Heidelberg str.
SL486]
gi|353612356|gb|EHC64748.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353665965|gb|EHD03930.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357957615|gb|EHJ82586.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|381296253|gb|EIC37360.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381296645|gb|EIC37749.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381303222|gb|EIC44251.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381308288|gb|EIC49132.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381315746|gb|EIC56502.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383798540|gb|AFH45622.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402517240|gb|EJW24644.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402517447|gb|EJW24847.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402526240|gb|EJW33517.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402528219|gb|EJW35477.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|344173309|emb|CCA88462.1| putative ATP pyrophosphatase [Ralstonia syzygii R24]
Length = 312
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
+ ++ + I ++ + G+ + + SGGKDS + VL L +R L +++D+
Sbjct: 14 LQSQVGRAIGDFKMIEGGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQ 73
Query: 104 SGYRDDSLQT-VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
G+ +D L T +K+ ++Y ++ D Y + KV K C+ C RR +
Sbjct: 74 PGFPEDVLPTYLKKLGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVI 125
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R A L KIA GH+ DDI T LN+ G + L T D + R P Y
Sbjct: 126 YRTAKELGASKIALGHHRDDIVNTFFLNMFFGGKMKSMPPKLATDNGDHIVIR--PLAYC 183
Query: 223 YEKEIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EK+I AY + +++ C N R +E + + ER P I +I + N
Sbjct: 184 AEKDIA---AYARAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQTPGRIDNIFSALRN 240
>gi|238796410|ref|ZP_04639919.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia mollaretii
ATCC 43969]
gi|238719855|gb|EEQ11662.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia mollaretii
ATCC 43969]
Length = 318
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ Q I + + G+R+ + SGGKDS + +L L + L +++D+ G+
Sbjct: 31 VGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFTLIAVNLDQKQPGFP 90
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGL--KNNCTFCGVFRRQALDRG 165
+D L + G+ KIV ++ YG IVK I K C+ C RR L R
Sbjct: 91 EDILPAYLDKQ---GVEYKIVE-ENTYG-----IVKEIIPEGKTTCSLCSRLRRGILYRT 141
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A+ L KIA GH+ DDI +T+ LN+ G +L +DG +P Y EK
Sbjct: 142 ATELGATKIALGHHRDDILQTLFLNMFYG--GKLKGMPPKLMSDDGKHIVIRPLAYCREK 199
Query: 226 EIMFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+I +A + C PN R ++ ++D ++ P I + + +N
Sbjct: 200 DIE-RFAVAREYPIIPCNLCGSQPNLQRQVIKDMLRDWDKQYPGRIETMFSAMQN 253
>gi|16764998|ref|NP_460613.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167549859|ref|ZP_02343617.1| YdaO [Salmonella enterica subsp. enterica serovar Saintpaul str.
SARA29]
gi|168260142|ref|ZP_02682115.1| YdaO [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|197248499|ref|YP_002146377.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197264456|ref|ZP_03164530.1| YdaO [Salmonella enterica subsp. enterica serovar Saintpaul str.
SARA23]
gi|374980660|ref|ZP_09721990.1| tRNACytosine32-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|375001226|ref|ZP_09725566.1| PP-loop family protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|378445067|ref|YP_005232699.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378699534|ref|YP_005181491.1| hypothetical protein SL1344_1585 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378984217|ref|YP_005247372.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|379700824|ref|YP_005242552.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383496352|ref|YP_005397041.1| hypothetical protein UMN798_1737 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|416569504|ref|ZP_11765581.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|417326206|ref|ZP_12111952.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417362896|ref|ZP_12136422.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417390859|ref|ZP_12154217.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417474975|ref|ZP_12169909.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417510713|ref|ZP_12175538.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|418788253|ref|ZP_13344048.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418792390|ref|ZP_13348135.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418797991|ref|ZP_13353671.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|421885942|ref|ZP_16317125.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422025824|ref|ZP_16372248.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422030856|ref|ZP_16377046.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427549705|ref|ZP_18927556.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427565388|ref|ZP_18932277.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427585399|ref|ZP_18937061.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427608344|ref|ZP_18941923.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427632851|ref|ZP_18946821.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427655878|ref|ZP_18951588.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427661016|ref|ZP_18956494.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427667489|ref|ZP_18961294.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427762443|ref|ZP_18966434.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|440762842|ref|ZP_20941892.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768005|ref|ZP_20946980.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440774455|ref|ZP_20953343.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|81522812|sp|Q8ZP88.1|TTCA_SALTY RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790138|sp|B5F5C0.1|TTCA_SALA4 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|16420181|gb|AAL20572.1| putative ATPase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|197212202|gb|ACH49599.1| YdaO [Salmonella enterica subsp. enterica serovar Agona str. SL483]
gi|197242711|gb|EDY25331.1| YdaO [Salmonella enterica subsp. enterica serovar Saintpaul str.
SARA23]
gi|205324962|gb|EDZ12801.1| YdaO [Salmonella enterica subsp. enterica serovar Saintpaul str.
SARA29]
gi|205350986|gb|EDZ37617.1| YdaO [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|261246846|emb|CBG24662.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301158182|emb|CBW17680.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912645|dbj|BAJ36619.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224280|gb|EFX49343.1| tRNACytosine32-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323129923|gb|ADX17353.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|353075914|gb|EHB41674.1| PP-loop family protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353573857|gb|EHC37089.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353601097|gb|EHC56806.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353617464|gb|EHC68441.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353645497|gb|EHC89180.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353645702|gb|EHC89331.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|363576581|gb|EHL60412.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|379984581|emb|CCF89398.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380463173|gb|AFD58576.1| hypothetical protein UMN798_1737 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|392763161|gb|EJA19969.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392767560|gb|EJA24324.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392768184|gb|EJA24941.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|414019585|gb|EKT03191.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414019894|gb|EKT03490.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414021709|gb|EKT05239.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414033741|gb|EKT16689.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414035490|gb|EKT18364.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414038485|gb|EKT21195.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414048325|gb|EKT30577.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414049949|gb|EKT32139.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414054185|gb|EKT36140.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414060135|gb|EKT41660.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414065589|gb|EKT46306.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436413973|gb|ELP11906.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436419135|gb|ELP17015.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436421838|gb|ELP19679.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|417415444|ref|ZP_12159105.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353622682|gb|EHC72176.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 KLGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|168230078|ref|ZP_02655136.1| YdaO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC
191]
gi|194471984|ref|ZP_03077968.1| YdaO [Salmonella enterica subsp. enterica serovar Kentucky str.
CVM29188]
gi|194458348|gb|EDX47187.1| YdaO [Salmonella enterica subsp. enterica serovar Kentucky str.
CVM29188]
gi|205335366|gb|EDZ22130.1| YdaO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC
191]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVQ-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|168462890|ref|ZP_02696821.1| YdaO [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|194443213|ref|YP_002040903.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198242873|ref|YP_002215492.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205352663|ref|YP_002226464.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207856831|ref|YP_002243482.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375118971|ref|ZP_09764138.1| YdaO [Salmonella enterica subsp. enterica serovar Dublin str.
SD3246]
gi|375123479|ref|ZP_09768643.1| YdaO [Salmonella enterica subsp. enterica serovar Gallinarum str.
SG9]
gi|378955175|ref|YP_005212662.1| hypothetical protein SPUL_1472 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|417333634|ref|ZP_12117107.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417518215|ref|ZP_12180619.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|418764188|ref|ZP_13320291.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418767074|ref|ZP_13323143.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418772764|ref|ZP_13328767.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418776889|ref|ZP_13332826.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418780736|ref|ZP_13336625.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418784074|ref|ZP_13339916.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418801717|ref|ZP_13357350.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418809190|ref|ZP_13364742.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813345|ref|ZP_13368866.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418817448|ref|ZP_13372935.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418821881|ref|ZP_13377296.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418826998|ref|ZP_13382166.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418830430|ref|ZP_13385392.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418837598|ref|ZP_13392470.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418840291|ref|ZP_13395120.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418851118|ref|ZP_13405832.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418854284|ref|ZP_13408963.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|419787259|ref|ZP_14312972.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419791822|ref|ZP_14317467.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|421358902|ref|ZP_15809199.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421364257|ref|ZP_15814490.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421368072|ref|ZP_15818265.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421371529|ref|ZP_15821687.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421376738|ref|ZP_15826837.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421381240|ref|ZP_15831295.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421387912|ref|ZP_15837911.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421390753|ref|ZP_15840728.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421394781|ref|ZP_15844720.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421400509|ref|ZP_15850395.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421403750|ref|ZP_15853594.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421406514|ref|ZP_15856328.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421412986|ref|ZP_15862740.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421415966|ref|ZP_15865687.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421421974|ref|ZP_15871642.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421426787|ref|ZP_15876415.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421429468|ref|ZP_15879064.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421435366|ref|ZP_15884903.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439664|ref|ZP_15889148.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421444934|ref|ZP_15894364.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421450368|ref|ZP_15899743.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|436613632|ref|ZP_20514044.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436717952|ref|ZP_20518911.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436803240|ref|ZP_20525679.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436808723|ref|ZP_20528103.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815519|ref|ZP_20533070.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436844942|ref|ZP_20538700.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851109|ref|ZP_20541708.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436857873|ref|ZP_20546393.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865049|ref|ZP_20551016.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870443|ref|ZP_20554214.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882171|ref|ZP_20561191.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436888041|ref|ZP_20564370.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896171|ref|ZP_20568927.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906148|ref|ZP_20574994.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911904|ref|ZP_20577733.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921837|ref|ZP_20584062.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436927423|ref|ZP_20587249.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935855|ref|ZP_20591295.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436943046|ref|ZP_20595992.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951463|ref|ZP_20600518.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961208|ref|ZP_20604582.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971195|ref|ZP_20609588.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436983202|ref|ZP_20613791.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436990415|ref|ZP_20616899.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437006783|ref|ZP_20622834.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437024310|ref|ZP_20629519.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029698|ref|ZP_20630880.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437041011|ref|ZP_20635078.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053128|ref|ZP_20642326.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058377|ref|ZP_20645224.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437070800|ref|ZP_20651978.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437076067|ref|ZP_20654430.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085427|ref|ZP_20660031.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437088041|ref|ZP_20661434.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437099840|ref|ZP_20665782.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437118615|ref|ZP_20670417.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437130672|ref|ZP_20676802.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437140641|ref|ZP_20682640.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437148031|ref|ZP_20687222.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437150508|ref|ZP_20688705.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437162311|ref|ZP_20695970.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437167112|ref|ZP_20698430.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437179964|ref|ZP_20705732.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437181881|ref|ZP_20706725.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437219519|ref|ZP_20712916.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437267831|ref|ZP_20721464.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437275944|ref|ZP_20726170.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437296302|ref|ZP_20732391.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437308151|ref|ZP_20735192.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437326243|ref|ZP_20740127.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437340688|ref|ZP_20744417.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437403844|ref|ZP_20751896.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437453588|ref|ZP_20759843.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437465751|ref|ZP_20764248.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437477369|ref|ZP_20767129.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437519469|ref|ZP_20778667.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437522426|ref|ZP_20779056.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437565083|ref|ZP_20787101.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437570935|ref|ZP_20788353.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437589768|ref|ZP_20794267.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437606426|ref|ZP_20799875.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437620579|ref|ZP_20804162.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437635619|ref|ZP_20807120.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437657491|ref|ZP_20811141.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437673145|ref|ZP_20816289.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437690536|ref|ZP_20820347.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437701787|ref|ZP_20824004.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437774857|ref|ZP_20835932.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437806276|ref|ZP_20839527.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437874298|ref|ZP_20848561.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|438037545|ref|ZP_20855570.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438086415|ref|ZP_20858954.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438097665|ref|ZP_20862489.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438112180|ref|ZP_20868777.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438134995|ref|ZP_20874187.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|445138165|ref|ZP_21383952.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|445141737|ref|ZP_21385636.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445154738|ref|ZP_21392009.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|445174060|ref|ZP_21396923.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445197581|ref|ZP_21400836.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445226675|ref|ZP_21403998.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445239936|ref|ZP_21407426.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445331148|ref|ZP_21414092.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445350593|ref|ZP_21420198.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445358700|ref|ZP_21422811.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|254790139|sp|B5FUP1.1|TTCA_SALDC RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790140|sp|B5R4D8.1|TTCA_SALEP RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790141|sp|B5RA25.1|TTCA_SALG2 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790143|sp|B4T6P5.1|TTCA_SALNS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|16611693|gb|AAL27304.1|AF370716_7 YdaO [Salmonella enterica subsp. enterica serovar Enteritidis]
gi|194401876|gb|ACF62098.1| YdaO [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|195633936|gb|EDX52288.1| YdaO [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|197937389|gb|ACH74722.1| YdaO [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205272444|emb|CAR37331.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708634|emb|CAR32956.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326623238|gb|EGE29583.1| YdaO [Salmonella enterica subsp. enterica serovar Dublin str.
SD3246]
gi|326627729|gb|EGE34072.1| YdaO [Salmonella enterica subsp. enterica serovar Gallinarum str.
SG9]
gi|353577796|gb|EHC39850.1| tRNA-2-thiocytidine synthetase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353649671|gb|EHC92244.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|357205786|gb|AET53832.1| hypothetical protein SPUL_1472 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|392619789|gb|EIX02167.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392620099|gb|EIX02469.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392730536|gb|EIZ87777.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392731891|gb|EIZ89114.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392735710|gb|EIZ92881.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392745228|gb|EJA02263.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392749786|gb|EJA06763.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392755903|gb|EJA12805.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392773275|gb|EJA29971.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392774571|gb|EJA31266.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392779921|gb|EJA36584.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392788437|gb|EJA44966.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392788648|gb|EJA45176.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392798333|gb|EJA54610.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392801768|gb|EJA57990.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392802567|gb|EJA58778.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392810781|gb|EJA66793.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392818051|gb|EJA73947.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392825077|gb|EJA80835.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|395984413|gb|EJH93600.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395986592|gb|EJH95756.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395987342|gb|EJH96505.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396000360|gb|EJI09374.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396001203|gb|EJI10215.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396002825|gb|EJI11814.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|396008737|gb|EJI17671.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396013518|gb|EJI22405.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396014563|gb|EJI23449.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396023342|gb|EJI32141.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396026830|gb|EJI35594.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396033686|gb|EJI42392.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396040074|gb|EJI48698.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396041289|gb|EJI49912.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396046070|gb|EJI54659.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396054294|gb|EJI62787.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396056635|gb|EJI65109.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396058349|gb|EJI66812.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396066616|gb|EJI74977.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396067365|gb|EJI75725.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396069266|gb|EJI77605.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|434940838|gb|ELL47396.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|434956757|gb|ELL50471.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434966540|gb|ELL59375.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434968678|gb|ELL61417.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434973635|gb|ELL66023.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434979528|gb|ELL71520.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434985216|gb|ELL76904.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434986411|gb|ELL78062.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990025|gb|ELL81575.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434996084|gb|ELL87400.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002184|gb|ELL93265.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435003743|gb|ELL94749.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009751|gb|ELM00537.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014725|gb|ELM05282.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016060|gb|ELM06586.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435024155|gb|ELM14361.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435026149|gb|ELM16280.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435037264|gb|ELM27083.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038693|gb|ELM28474.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435043245|gb|ELM32962.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050347|gb|ELM39851.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435051930|gb|ELM41432.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057484|gb|ELM46853.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435065640|gb|ELM54745.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435069699|gb|ELM58698.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435070296|gb|ELM59289.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435074117|gb|ELM62972.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435082732|gb|ELM71343.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435086906|gb|ELM75434.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435089511|gb|ELM77936.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435090771|gb|ELM79173.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435094190|gb|ELM82529.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435104701|gb|ELM92740.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105364|gb|ELM93401.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435117412|gb|ELN05123.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435124646|gb|ELN12102.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435125379|gb|ELN12821.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435130156|gb|ELN17414.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435131785|gb|ELN18990.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435133487|gb|ELN20654.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435143266|gb|ELN30134.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435145752|gb|ELN32561.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435149731|gb|ELN36425.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435151734|gb|ELN38373.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435165538|gb|ELN51566.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435174143|gb|ELN59600.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435175319|gb|ELN60737.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435179693|gb|ELN64834.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435185746|gb|ELN70602.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435192514|gb|ELN77038.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435194494|gb|ELN78936.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435201494|gb|ELN85397.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435205855|gb|ELN89430.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435208030|gb|ELN91456.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435216175|gb|ELN98651.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435222108|gb|ELO04233.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435227481|gb|ELO08981.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435236095|gb|ELO16873.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435249012|gb|ELO28858.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435250381|gb|ELO30113.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435255740|gb|ELO35101.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435256109|gb|ELO35455.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435257375|gb|ELO36666.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435271396|gb|ELO49863.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435279132|gb|ELO56936.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435280522|gb|ELO58227.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435281577|gb|ELO59242.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435295089|gb|ELO71616.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435301455|gb|ELO77482.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435304820|gb|ELO80410.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435318747|gb|ELO91658.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435324041|gb|ELO96011.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435326822|gb|ELO98604.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435330258|gb|ELP01524.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|435334549|gb|ELP05072.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|444843503|gb|ELX68757.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|444850417|gb|ELX75518.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444850440|gb|ELX75540.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|444859491|gb|ELX84437.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444863589|gb|ELX88409.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444867533|gb|ELX92214.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444874757|gb|ELX98991.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444877492|gb|ELY01636.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444885855|gb|ELY09628.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444891248|gb|ELY14514.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|91785571|ref|YP_560777.1| C32 tRNA thiolase [Burkholderia xenovorans LB400]
gi|123358392|sp|Q13T64.1|TTCA_BURXL RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|91689525|gb|ABE32725.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia xenovorans LB400]
Length = 336
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 24/278 (8%)
Query: 5 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERI 64
E+ A R T ++K A + K +++ R+ + + IV + + G+++
Sbjct: 20 EATPVHARARSPLTRREQKEAYENNKLFKRLARQ---------VGEAIVDFNMIEDGDKV 70
Query: 65 AIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLP 124
+ SGGKDS + +L L R D+ +++D+ G+ + L + Q +P
Sbjct: 71 MVCLSGGKDSYAMLEILMRLRERAPINFDIVAVNLDQKQPGFPEHVLPEYLK---QLDIP 127
Query: 125 LKIVSYKDLYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADD 182
I + +D Y IVK V K C+ C RR L R A L KIA GH+ DD
Sbjct: 128 FHIEN-QDTYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDD 181
Query: 183 IAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFST 242
I +T+LLN+ G +L +DG +P Y E ++ YA +
Sbjct: 182 ILQTLLLNMFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPC 238
Query: 243 E-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
C PN R + ++D E+ P I ++ + N
Sbjct: 239 NLCGSQPNLKRAEMKALVRDWEKRFPGRIENMFNALAN 276
>gi|225075267|ref|ZP_03718466.1| hypothetical protein NEIFLAOT_00270 [Neisseria flavescens
NRL30031/H210]
gi|224953442|gb|EEG34651.1| hypothetical protein NEIFLAOT_00270 [Neisseria flavescens
NRL30031/H210]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ G+P KIV +D Y T+ +++ K C+ C RR L R A L KIA
Sbjct: 91 S---IGVPYKIVE-EDTYS-TVKRVLE--EGKTTCSLCSRLRRGILYRTAKELGCTKIAL 143
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA K+
Sbjct: 144 GHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAELKQ 200
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
C PN R + ++D ++ P I + + +N
Sbjct: 201 FPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|168819457|ref|ZP_02831457.1| YdaO [Salmonella enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|200390490|ref|ZP_03217101.1| YdaO [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|409250024|ref|YP_006885837.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|199602935|gb|EDZ01481.1| YdaO [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|205343858|gb|EDZ30622.1| YdaO [Salmonella enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320085852|emb|CBY95628.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|241758779|ref|ZP_04756892.1| C32 tRNA thiolase [Neisseria flavescens SK114]
gi|241320987|gb|EER57200.1| C32 tRNA thiolase [Neisseria flavescens SK114]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ G+P KIV +D Y T+ +++ K C+ C RR L R A L KIA
Sbjct: 91 S---IGVPYKIVE-EDTYS-TVKRVLE--EGKTTCSLCSRLRRGILYRTAKELGCTKIAL 143
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA K+
Sbjct: 144 GHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAELKQ 200
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
C PN R + ++D ++ P I + + +N
Sbjct: 201 FPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|167992837|ref|ZP_02573933.1| YdaO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|378450208|ref|YP_005237567.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378988994|ref|YP_005252158.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|205329037|gb|EDZ15801.1| YdaO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|267993586|gb|ACY88471.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|332988541|gb|AEF07524.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|429728806|ref|ZP_19263509.1| PP-loop family protein [Peptostreptococcus anaerobius VPI 4330]
gi|429147490|gb|EKX90515.1| PP-loop family protein [Peptostreptococcus anaerobius VPI 4330]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 19/288 (6%)
Query: 2 EVAESKSKKAGGRLCSTC---NQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLF 58
++ E + K G C RK+ + K++ + R+ + F + I +L
Sbjct: 4 KILEESTNKLAGSGCKVLVPEEDRKSLKEIEKSITKRYRKRLWSKFIKAIKTY----ELV 59
Query: 59 KAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNE 118
+ G++IA+ SGGKDS ++A + EL R +L L++D G DS++ + +
Sbjct: 60 QEGDKIAVAISGGKDSMLMAKMFQELKRHSPVNFELVYLAMDPGYH----DSIRKLLEDN 115
Query: 119 IQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGH 178
+Y L + +V++ + E+ I C C RR AL A L +K+A GH
Sbjct: 116 CEY-LDIPLVTFDS----QIFEVADRIASDYPCYMCARMRRGALYGKAEELGCNKLALGH 170
Query: 179 NADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIM--FTYAYFKR 236
+ DD+ ET +LN+L + L +T +G I +P Y E++I+ TY
Sbjct: 171 HFDDVIETTMLNVLCAGNFKTMLPKLKSTNFEG-IELIRPLYYIREEDIIRWMTYTGIWP 229
Query: 237 LDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIST 284
L+ R ++ IK+L + I K+ EN + +
Sbjct: 230 LNCACMVAAKKTGNKRYEIKDLIKNLSKDFTNVEKSIFKAAENVNVDS 277
>gi|350271169|ref|YP_004882477.1| hypothetical protein OBV_27730 [Oscillibacter valericigenes
Sjm18-20]
gi|348596011|dbj|BAK99971.1| hypothetical protein OBV_27730 [Oscillibacter valericigenes
Sjm18-20]
Length = 280
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L G++IA+ SGGKDS VLA ++ EL R + +L + +D GY ++ Q ++
Sbjct: 35 ELIGPGDKIAVCISGGKDSMVLAKLMQELQRHTDQPFELVFMVMD---PGYAPENRQLIE 91
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N + +P+ I + D++ T+ KN C C RR L A L +KIA
Sbjct: 92 ENAARLEIPVTIFN-SDIFDVTIQ------ADKNPCYLCARMRRGFLYAKAQELGCNKIA 144
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGP-IPRCKPFKYTYEKEIMFTYAYF 234
GH+ D+ ET L+ +L G A+L ++ P + +P +E +I+ + +
Sbjct: 145 LGHHFSDVIETTLMALLYG--AQLQAMPPKLHSKNFPGMELIRPLYCVHEDDII-AWKNY 201
Query: 235 KRLDYFSTECIYS 247
RL + C ++
Sbjct: 202 NRLRFLQCACRFT 214
>gi|418511260|ref|ZP_13077526.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|366084935|gb|EHN48829.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|333995887|ref|YP_004528500.1| PP-loop superfamily ATPase [Treponema azotonutricium ZAS-9]
gi|333734302|gb|AEF80251.1| ATPase, PP-loop superfamily [Treponema azotonutricium ZAS-9]
Length = 254
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 42 EVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDE 101
E+ ++ + I+ +L + G+RI I SGGKDSTVLA+ LS L DL I
Sbjct: 13 EIVQKLTAKAILERKLIEEGDRILIAVSGGKDSTVLAWALSSLRPLLKINYDLAGFHISS 72
Query: 102 GISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQA 161
S+ + + E +G+P + DL + + G K NC +C RR
Sbjct: 73 DFCACCKKSILSQRLEE--WGVP-----FTDLSVPIIGRLKP--GRKMNCYWCSTQRRTE 123
Query: 162 LDRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKY 221
L R A +KIA GH+ DDI ET +N+ D L ++ P+ +P Y
Sbjct: 124 LLRYAMEHGFNKIALGHHLDDIIETFFMNM--ADKGTLLAMPMLLRYRKYPVSLIRPLGY 181
Query: 222 TYEKEIMFTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDL 262
E++I+ A K + + C + N+ R R+ I D
Sbjct: 182 VEEQQII-ACAEEKEILKAACTCPFGINSKRRDIRKRIADF 221
>gi|331002999|ref|ZP_08326511.1| hypothetical protein HMPREF0491_01373 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413043|gb|EGG92418.1| hypothetical protein HMPREF0491_01373 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 382
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVK 115
+L K G++IA+ SGGKDS ++A + EL + +L L ++ GY D + +T+
Sbjct: 138 ELIKDGDKIAVCISGGKDSMLMAKLFQELLKHGKRNFELVFLVMN---PGYDDINYRTIV 194
Query: 116 RNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIA 175
N +P+ +V +Y ++ K+ C C RR L A L +KIA
Sbjct: 195 DNAKLLDVPI-VVFESSIYDIVAED------EKSPCYLCARMRRGHLYAKAKELGCNKIA 247
Query: 176 TGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFK 235
GH+ DD+ ET+++ +L G + L +T +G + +P Y +E + +A +
Sbjct: 248 LGHHFDDVIETIVMGMLYGAQIQTMMPKLHSTNFEG-MELIRPL-YLVREEDIIHWAKYN 305
Query: 236 RLDYFSTECIYSPN----------AYRGFAREFIKDLERLRPRAILDIIKSGENFRISTS 285
+L++ C + N + R ++ I++L P +I +S EN + T
Sbjct: 306 QLNFIRCACRLTDNCSISETGDKGSMRAEVKKLIRELAAKNPYIEKNIFRSVENVSLDTV 365
Query: 286 TKMPEQGT 293
+ G
Sbjct: 366 IAYKKNGV 373
>gi|416654270|ref|ZP_11812181.1| C32 tRNA thiolase, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323213900|gb|EFZ98671.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 I-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|320537144|ref|ZP_08037116.1| PP-loop family protein [Treponema phagedenis F0421]
gi|320146017|gb|EFW37661.1| PP-loop family protein [Treponema phagedenis F0421]
Length = 235
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLA-FVLSELNRRH-NYGLDLFLLSIDEGISG 105
I + + Q+ K G+RI IGASGGKDST LA + + L RR + + ++ D G S
Sbjct: 10 IDKAVSDYQMIKDGDRILIGASGGKDSTALAEYFAARLKRRDAQFTVSAMHIATDIG-SP 68
Query: 106 YRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRG 165
+ + ++ +R +G+PL I+ + G + G + NC +C RR L+
Sbjct: 69 FNQNLVELFER----WGIPL-IIKTVSVLGRLKE------GHRMNCWWCSSQRRTELNNF 117
Query: 166 ASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEK 225
A +KIA GH+ DDI ET+L+N L I LS + E PI +P
Sbjct: 118 ALKNGFNKIALGHHLDDILETLLMNALGKGI--LSTMPPVLQFEKYPITMIRPLCLA--- 172
Query: 226 EIMFTYAYFKRLDYFSTECI--YSPNAYRGFAREFIKDL 262
+I + + +YFS+ C Y N+ R AR + L
Sbjct: 173 DIPMIVRHAQMQNYFSSTCTCNYQSNSTRKEARSRLDAL 211
>gi|17544894|ref|NP_518296.1| C32 tRNA thiolase [Ralstonia solanacearum GMI1000]
gi|81506945|sp|Q8Y306.1|TTCA_RALSO RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|17427183|emb|CAD13703.1| putative cog0037, predicted atpase of the pp-loop superfamily
protein [Ralstonia solanacearum GMI1000]
Length = 312
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 17/228 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQT-V 114
++ + G+ + + SGGKDS + VL L +R L +++D+ G+ +D L +
Sbjct: 26 KMIEDGDTVLVCLSGGKDSYTMLSVLMALQKRAPIDFKLIAMNLDQKQPGFPEDVLPGYL 85
Query: 115 KRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI 174
K+ ++Y ++ D Y + KV K C+ C RR + R A L +KI
Sbjct: 86 KKVGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVIYRTAKELGANKI 137
Query: 175 ATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
A GH+ DDI T LN+ G + L T D + R P Y EKEI AY
Sbjct: 138 ALGHHRDDIVNTFFLNMFFGGKMKAMPPKLATDNGDHIVIR--PLAYCAEKEIA---AYA 192
Query: 235 KRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +++ C N R +E + + ER P I +I + +N
Sbjct: 193 RAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQAPGRIDNIFSALQN 240
>gi|16760232|ref|NP_455849.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141999|ref|NP_805341.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213053470|ref|ZP_03346348.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213416969|ref|ZP_03350113.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213614398|ref|ZP_03371224.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|289823675|ref|ZP_06543287.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378959720|ref|YP_005217206.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|437838058|ref|ZP_20845964.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|81514744|sp|Q8Z783.1|TTCA_SALTI RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|25305888|pir||AC0663 conserved hypothetical protein STY1412 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502527|emb|CAD01676.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137628|gb|AAO69190.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353592|gb|AEZ45353.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|435298467|gb|ELO74683.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|387903487|ref|YP_006333826.1| trNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
gi|387578379|gb|AFJ87095.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + +AG+++ + SGGK
Sbjct: 24 GRRALTRREQKEAYENNKLFKRIARQ---------VGQAIGDYNMIEAGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPE---HVLPEYLTQIGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TY-----SIVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGRNVVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 243 LKRAEMKALIREWDKRFP 260
>gi|339999472|ref|YP_004730355.1| hypothetical protein SBG_1493 [Salmonella bongori NCTC 12419]
gi|339512833|emb|CCC30576.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|121730376|ref|ZP_01682729.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|121627872|gb|EAX60459.1| conserved hypothetical protein [Vibrio cholerae V52]
Length = 309
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D KV K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYAIVQD---KVPEGKTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|261380133|ref|ZP_05984706.1| PP-loop family protein [Neisseria subflava NJ9703]
gi|284796970|gb|EFC52317.1| PP-loop family protein [Neisseria subflava NJ9703]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|238021289|ref|ZP_04601715.1| hypothetical protein GCWU000324_01188 [Kingella oralis ATCC 51147]
gi|237868269|gb|EEP69275.1| hypothetical protein GCWU000324_01188 [Kingella oralis ATCC 51147]
Length = 317
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIENGDKIMVCLSGGKDSYALLDILRQLQASAPIEFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDIIATLFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + +KD ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLKDWDKRFPGRIESMFSALQN 244
>gi|134297159|ref|YP_001120894.1| C32 tRNA thiolase [Burkholderia vietnamiensis G4]
gi|205830572|sp|A4JIF6.1|TTCA_BURVG RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|134140316|gb|ABO56059.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia vietnamiensis G4]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + +AG+++ + SGGK
Sbjct: 24 GRRALTRREQKEAYENNKLFKRIARQ---------VGQAIGDYNMIEAGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPE---HVLPEYLTQIGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TY-----SIVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGRNVVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 243 LKRAEMKALIREWDKRFP 260
>gi|15641443|ref|NP_231075.1| C32 tRNA thiolase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121590934|ref|ZP_01678255.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153817918|ref|ZP_01970585.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823754|ref|ZP_01976421.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227081604|ref|YP_002810155.1| hypothetical protein VCM66_1388 [Vibrio cholerae M66-2]
gi|229504993|ref|ZP_04394503.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae BX
330286]
gi|229511338|ref|ZP_04400817.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae B33]
gi|229518456|ref|ZP_04407900.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC9]
gi|229607996|ref|YP_002878644.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
MJ-1236]
gi|254848552|ref|ZP_05237902.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745811|ref|ZP_05419759.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholera CIRS
101]
gi|262158910|ref|ZP_06030022.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae INDRE
91/1]
gi|298498489|ref|ZP_07008296.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360035327|ref|YP_004937090.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741227|ref|YP_005333196.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
IEC224]
gi|417813446|ref|ZP_12460102.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-49A2]
gi|417816310|ref|ZP_12462942.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HCUF01]
gi|418332460|ref|ZP_12943392.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-06A1]
gi|418337201|ref|ZP_12946099.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-23A1]
gi|418344719|ref|ZP_12950501.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-28A1]
gi|418348869|ref|ZP_12953603.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43A1]
gi|418354645|ref|ZP_12957366.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-61A1]
gi|419825911|ref|ZP_14349415.1| PP-loop family protein [Vibrio cholerae CP1033(6)]
gi|421316444|ref|ZP_15767015.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1032(5)]
gi|421321035|ref|ZP_15771592.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1038(11)]
gi|421325030|ref|ZP_15775556.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1041(14)]
gi|421328690|ref|ZP_15779204.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1042(15)]
gi|421331714|ref|ZP_15782194.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1046(19)]
gi|421335289|ref|ZP_15785755.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1048(21)]
gi|421339179|ref|ZP_15789614.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-20A2]
gi|421346956|ref|ZP_15797338.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46A1]
gi|422891542|ref|ZP_16933915.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-40A1]
gi|422902749|ref|ZP_16937743.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48A1]
gi|422906632|ref|ZP_16941456.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-70A1]
gi|422913211|ref|ZP_16947728.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HFU-02]
gi|422925691|ref|ZP_16958714.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-38A1]
gi|423145014|ref|ZP_17132621.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-19A1]
gi|423149689|ref|ZP_17137017.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-21A1]
gi|423153502|ref|ZP_17140696.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-22A1]
gi|423156317|ref|ZP_17143421.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-32A1]
gi|423160141|ref|ZP_17147109.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-33A2]
gi|423164867|ref|ZP_17151618.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48B2]
gi|423730998|ref|ZP_17704310.1| PP-loop family protein [Vibrio cholerae HC-17A1]
gi|423758153|ref|ZP_17712355.1| PP-loop family protein [Vibrio cholerae HC-50A2]
gi|423892687|ref|ZP_17726367.1| PP-loop family protein [Vibrio cholerae HC-62A1]
gi|423927606|ref|ZP_17730985.1| PP-loop family protein [Vibrio cholerae HC-77A1]
gi|424002334|ref|ZP_17745418.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-17A2]
gi|424006169|ref|ZP_17749147.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-37A1]
gi|424024187|ref|ZP_17763845.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-62B1]
gi|424027036|ref|ZP_17766647.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-69A1]
gi|424586311|ref|ZP_18025898.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1030(3)]
gi|424595013|ref|ZP_18034345.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1040(13)]
gi|424598881|ref|ZP_18038070.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio Cholerae
CP1044(17)]
gi|424601611|ref|ZP_18040763.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1047(20)]
gi|424606609|ref|ZP_18045567.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1050(23)]
gi|424610439|ref|ZP_18049290.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-39A1]
gi|424613246|ref|ZP_18052047.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-41A1]
gi|424617235|ref|ZP_18055919.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-42A1]
gi|424622010|ref|ZP_18060531.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-47A1]
gi|424644981|ref|ZP_18082729.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A2]
gi|424652704|ref|ZP_18090138.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A2]
gi|424656564|ref|ZP_18093862.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A2]
gi|440709685|ref|ZP_20890342.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae 4260B]
gi|443503521|ref|ZP_21070497.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-64A1]
gi|443507420|ref|ZP_21074202.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-65A1]
gi|443511550|ref|ZP_21078202.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-67A1]
gi|443515105|ref|ZP_21081629.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-68A1]
gi|443518898|ref|ZP_21085307.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-71A1]
gi|443523793|ref|ZP_21090016.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-72A2]
gi|443531398|ref|ZP_21097413.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-7A1]
gi|443535180|ref|ZP_21101069.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-80A1]
gi|443538741|ref|ZP_21104596.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A1]
gi|449056085|ref|ZP_21734753.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae O1 str.
Inaba G4222]
gi|81544966|sp|Q9KS29.1|TTCA_VIBCH RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790148|sp|C3LMC8.1|TTCA_VIBCM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|9655931|gb|AAF94589.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547209|gb|EAX57334.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126511545|gb|EAZ74139.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518723|gb|EAZ75946.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227009492|gb|ACP05704.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229345171|gb|EEO10145.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC9]
gi|229351303|gb|EEO16244.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae B33]
gi|229357216|gb|EEO22133.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae BX
330286]
gi|229370651|gb|ACQ61074.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
MJ-1236]
gi|254844257|gb|EET22671.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736886|gb|EET92283.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholera CIRS
101]
gi|262029095|gb|EEY47747.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae INDRE
91/1]
gi|297542822|gb|EFH78872.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340041032|gb|EGR02001.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-49A2]
gi|340042036|gb|EGR03002.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HCUF01]
gi|341623134|gb|EGS48700.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-70A1]
gi|341623171|gb|EGS48736.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48A1]
gi|341624197|gb|EGS49705.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-40A1]
gi|341639283|gb|EGS63904.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HFU-02]
gi|341647129|gb|EGS71219.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-38A1]
gi|356419019|gb|EHH72589.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-06A1]
gi|356419354|gb|EHH72902.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-21A1]
gi|356424416|gb|EHH77822.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-19A1]
gi|356430603|gb|EHH83809.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-22A1]
gi|356432779|gb|EHH85976.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-23A1]
gi|356435917|gb|EHH89053.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-28A1]
gi|356441717|gb|EHH94605.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-32A1]
gi|356447608|gb|EHI00399.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43A1]
gi|356448472|gb|EHI01242.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-33A2]
gi|356453047|gb|EHI05710.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-61A1]
gi|356454248|gb|EHI06900.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48B2]
gi|356646481|gb|AET26536.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae O1
str. 2010EL-1786]
gi|378794737|gb|AFC58208.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
IEC224]
gi|395920700|gb|EJH31522.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1041(14)]
gi|395921401|gb|EJH32221.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1032(5)]
gi|395924017|gb|EJH34828.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1038(11)]
gi|395930196|gb|EJH40945.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1042(15)]
gi|395932978|gb|EJH43721.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1046(19)]
gi|395936243|gb|EJH46971.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1048(21)]
gi|395944127|gb|EJH54801.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-20A2]
gi|395946016|gb|EJH56680.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46A1]
gi|395960149|gb|EJH70537.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A2]
gi|395961256|gb|EJH71595.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A2]
gi|395963987|gb|EJH74232.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-42A1]
gi|395971880|gb|EJH81509.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-47A1]
gi|395975255|gb|EJH84750.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1030(3)]
gi|395977256|gb|EJH86674.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1047(20)]
gi|408008107|gb|EKG46124.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-39A1]
gi|408014283|gb|EKG51939.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-41A1]
gi|408033753|gb|EKG70279.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1040(13)]
gi|408043230|gb|EKG79237.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio Cholerae
CP1044(17)]
gi|408044527|gb|EKG80437.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1050(23)]
gi|408055167|gb|EKG90107.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A2]
gi|408609992|gb|EKK83368.1| PP-loop family protein [Vibrio cholerae CP1033(6)]
gi|408625140|gb|EKK98060.1| PP-loop family protein [Vibrio cholerae HC-17A1]
gi|408637720|gb|EKL09745.1| PP-loop family protein [Vibrio cholerae HC-50A2]
gi|408655763|gb|EKL26871.1| PP-loop family protein [Vibrio cholerae HC-77A1]
gi|408657249|gb|EKL28335.1| PP-loop family protein [Vibrio cholerae HC-62A1]
gi|408846736|gb|EKL86821.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-37A1]
gi|408847455|gb|EKL87524.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-17A2]
gi|408871201|gb|EKM10445.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-62B1]
gi|408879722|gb|EKM18673.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-69A1]
gi|439975274|gb|ELP51410.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae 4260B]
gi|443432113|gb|ELS74647.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-64A1]
gi|443435952|gb|ELS82077.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-65A1]
gi|443439492|gb|ELS89193.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-67A1]
gi|443443593|gb|ELS96882.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-68A1]
gi|443447449|gb|ELT04092.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-71A1]
gi|443450195|gb|ELT10476.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-72A2]
gi|443458481|gb|ELT25877.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-7A1]
gi|443461643|gb|ELT32705.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-80A1]
gi|443466330|gb|ELT40989.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A1]
gi|448264421|gb|EMB01659.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae O1 str.
Inaba G4222]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D KV K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYAIVQD---KVPEGKTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|254805067|ref|YP_003083288.1| putative PP-loop ATPase [Neisseria meningitidis alpha14]
gi|421544555|ref|ZP_15990631.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Neisseria
meningitidis NM140]
gi|205830655|sp|A9LZH0.2|TTCA_NEIM0 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254668609|emb|CBA06181.1| putative PP-loop ATPase [Neisseria meningitidis alpha14]
gi|402323746|gb|EJU59188.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Neisseria
meningitidis NM140]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|423140102|ref|ZP_17127740.1| PP-loop family protein [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052656|gb|EHY70547.1| PP-loop family protein [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|349609743|ref|ZP_08889120.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Neisseria sp.
GT4A_CT1]
gi|348611311|gb|EGY60972.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Neisseria sp.
GT4A_CT1]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|437495276|ref|ZP_20772691.1| tRNA 2-thiocytidine biosynthesis protein TtcA, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435226947|gb|ELO08489.1| tRNA 2-thiocytidine biosynthesis protein TtcA, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
Length = 293
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 8 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 67
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 68 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 120
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 121 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 178
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 179 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 230
>gi|299068269|emb|CBJ39490.1| putative ATP pyrophosphatase [Ralstonia solanacearum CMR15]
Length = 312
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)
Query: 56 QLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQT-V 114
++ + G+ + + SGGKDS + VL L +R L +++D+ G+ +D L +
Sbjct: 26 KMIEDGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQPGFPEDVLPNYL 85
Query: 115 KRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKI 174
K+ ++Y ++ D Y + KV K C+ C RR + R A L +KI
Sbjct: 86 KKVGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVIYRTAKELGANKI 137
Query: 175 ATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYF 234
A GH+ DDI T LN+ G + L T D + R P Y EKEI AY
Sbjct: 138 ALGHHRDDIVNTFFLNMFFGGKMKAMPPKLATDNGDHIVIR--PLAYCSEKEIA---AYA 192
Query: 235 KRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKS 276
+ +++ C N R +E + + ER P I +I S
Sbjct: 193 RAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQAPGRIDNIFAS 237
>gi|319638342|ref|ZP_07993105.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Neisseria mucosa
C102]
gi|317400615|gb|EFV81273.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Neisseria mucosa
C102]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|298368800|ref|ZP_06980118.1| PP-loop family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282803|gb|EFI24290.1| PP-loop family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|323492659|ref|ZP_08097803.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio brasiliensis
LMG 20546]
gi|323313034|gb|EGA66154.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio brasiliensis
LMG 20546]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 29 QAIQDFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFSLVAVNLDQKQPGFPGH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D+I + K C+ C RR L R A+ L
Sbjct: 89 ILPEYLES---LGVEYKIVE-EDTYSIVQDKIPEG---KTTCSLCSRLRRGILYRTANEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFHGGKMKAMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSEMREYPIIPCNLCGSQPNLQRQNIKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|261379094|ref|ZP_05983667.1| PP-loop family protein [Neisseria cinerea ATCC 14685]
gi|269144475|gb|EEZ70893.1| PP-loop family protein [Neisseria cinerea ATCC 14685]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|340362616|ref|ZP_08684989.1| PP-loop family protein [Neisseria macacae ATCC 33926]
gi|339887207|gb|EGQ76791.1| PP-loop family protein [Neisseria macacae ATCC 33926]
Length = 356
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 68 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 127
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 128 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 177
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 178 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 234
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 235 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 281
>gi|323527653|ref|YP_004229806.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384655|gb|ADX56746.1| PP-loop domain protein [Burkholderia sp. CCGE1001]
Length = 324
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 15/266 (5%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
+ ++K+ L R + E ++ ++ Q I + + G+++ + SGGKDS
Sbjct: 11 TPAARQKSPLTRREQKEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSYA 70
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
+ +L L R D+ +++D+ G+ + L + Q +P I + +D Y
Sbjct: 71 MLDILMRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QLDIPFHIEN-QDTYS- 125
Query: 137 TMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN+ G
Sbjct: 126 ----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYG 181
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPNAYRG 253
+L +DG +P Y E ++ YA + C PN R
Sbjct: 182 --GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPNLKRA 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGEN 279
+ I+D E+ P I ++ + N
Sbjct: 239 EMKALIRDWEKRFPGRIENMFNALSN 264
>gi|78067798|ref|YP_370567.1| C32 tRNA thiolase [Burkholderia sp. 383]
gi|123567481|sp|Q39C93.1|TTCA_BURS3 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|77968543|gb|ABB09923.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia sp. 383]
Length = 331
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 13 GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGK 72
GR T ++K A + K ++I R+ + Q I + + G+++ + SGGK
Sbjct: 24 GRPALTRREQKDAYENNKLFKRIVRQ---------VGQAIGDFNMIEQGDKVMVCLSGGK 74
Query: 73 DSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKD 132
DS + VL L R D+ +++D+ G+ + L + Q G+P I + +D
Sbjct: 75 DSYAMLDVLLRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QVGVPFHIEN-QD 130
Query: 133 LYGWTMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLN 190
Y IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN
Sbjct: 131 TYS-----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLN 185
Query: 191 ILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPN 249
+ G +L +DG +P Y E ++ YA + C PN
Sbjct: 186 MFYG--GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPN 242
Query: 250 AYRGFAREFIKDLERLRP 267
R + I++ ++ P
Sbjct: 243 LKRAEMKALIREWDKRFP 260
>gi|261364926|ref|ZP_05977809.1| PP-loop family protein [Neisseria mucosa ATCC 25996]
gi|288566711|gb|EFC88271.1| PP-loop family protein [Neisseria mucosa ATCC 25996]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|407715036|ref|YP_006835601.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
gi|407237220|gb|AFT87419.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
Length = 324
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 15/266 (5%)
Query: 17 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTV 76
+ ++K+ L R + E ++ ++ Q I + + G+++ + SGGKDS
Sbjct: 11 TPAARQKSPLTRREQKEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSYA 70
Query: 77 LAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGW 136
+ +L L R D+ +++D+ G+ + L + Q +P I + +D Y
Sbjct: 71 MLDILMRLRERAPIDFDIVAVNLDQKQPGFPEHVLPEYLK---QLDIPFHIEN-QDTYS- 125
Query: 137 TMDEIVK--VIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNILRG 194
IVK V K C+ C RR L R A L KIA GH+ DDI +T+LLN+ G
Sbjct: 126 ----IVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYG 181
Query: 195 DIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKRLDYFSTE-CIYSPNAYRG 253
+L +DG +P Y E ++ YA + C PN R
Sbjct: 182 --GKLKGMPPKLQSDDGKNIVIRPLAYVKETDLE-KYAELREFPIIPCNLCGSQPNLKRA 238
Query: 254 FAREFIKDLERLRPRAILDIIKSGEN 279
+ I+D E+ P I ++ + N
Sbjct: 239 EMKALIRDWEKRFPGRIENMFNALSN 264
>gi|255065884|ref|ZP_05317739.1| PP-loop family protein [Neisseria sicca ATCC 29256]
gi|255049795|gb|EET45259.1| PP-loop family protein [Neisseria sicca ATCC 29256]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G++I + SGGKDS L +L +L +L +++D+ G+ ++ L T
Sbjct: 31 MIEPGDKIMVCLSGGKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLE 90
Query: 117 NEIQYGLPLKIVSYKDLYGWT---MDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDK 173
+ G+P KIV +D Y +DE K C+ C RR L R A L K
Sbjct: 91 S---IGVPYKIVE-EDTYSTVKRVLDEG------KTTCSLCSRLRRGILYRTAKELGCTK 140
Query: 174 IATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAY 233
IA GH+ DDI T+ LN+ G + L++ ++G +P Y EK+++ YA
Sbjct: 141 IALGHHRDDILATMFLNMFYGGKLKAMPPKLVS--DNGEHIVIRPLAYVKEKDLI-KYAE 197
Query: 234 FKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
K+ C PN R + ++D ++ P I + + +N
Sbjct: 198 LKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
>gi|145634319|ref|ZP_01790029.1| hypothetical protein CGSHiAA_05999 [Haemophilus influenzae PittAA]
gi|145268299|gb|EDK08293.1| hypothetical protein CGSHiAA_05999 [Haemophilus influenzae PittAA]
Length = 313
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 11/228 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+++ + SGGKDS L +L L + D+ +++D+ G+ + L
Sbjct: 38 MIEDGDKVMVCLSGGKDSYTLLDILLNLQQSAPIKFDIVAVNLDQKQPGFPEHVLPEYLE 97
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ G+ KIV ++ YG ++I + K C+ C RR L R A+ L KIA
Sbjct: 98 S---IGVDYKIVQ-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTATELGATKIAL 150
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ T+ LN+ G + LI+ +DG +P Y EK+I YA K+
Sbjct: 151 GHHRDDMLATLFLNMFYGGKMKSMPPKLIS--DDGKQIVIRPLAYCKEKDIE-KYAIAKK 207
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
C PN R +E + +R P + + + +N +S
Sbjct: 208 FPIIPCNLCGSQPNLQRQVVKEMLNTWDRQYPGRLETMFSAMQNITLS 255
>gi|300705432|ref|YP_003747035.1| ATP pyrophosphatase [Ralstonia solanacearum CFBP2957]
gi|299073096|emb|CBJ44453.1| putative ATP pyrophosphatase [Ralstonia solanacearum CFBP2957]
Length = 312
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 44 FEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 103
+ ++ + I ++ + G+ + + SGGKDS + VL L +R L +++D+
Sbjct: 14 LQSQVGRAIGDFKMIEDGDTVLVCLSGGKDSYTMLSVLMALQKRAPVDFKLIAMNLDQKQ 73
Query: 104 SGYRDDSLQT-VKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQAL 162
G+ +D L +K+ ++Y ++ D Y + KV K C+ C RR +
Sbjct: 74 PGFPEDVLPNYLKKVGVEY-----VIVEADTYSIVKE---KVPEGKTTCSLCSRLRRGVI 125
Query: 163 DRGASLLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYT 222
R A L +KIA GH+ DDI T LN+ G + L T D + R P Y
Sbjct: 126 YRTAKELGANKIALGHHRDDIVNTFFLNMFFGGKMKAMPPKLATDNGDHIVIR--PLAYC 183
Query: 223 YEKEIMFTYAYFKRLDYFSTECIY---SPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
EKEI +Y + +++ C N R +E + + ER P I +I + +N
Sbjct: 184 AEKEIA---SYARAMEFPIIPCNLCGSQENLQRKKVKEMLLEWERQAPGRIDNIFAALQN 240
>gi|437720552|ref|ZP_20828798.1| tRNA 2-thiocytidine biosynthesis protein TtcA, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435294823|gb|ELO71391.1| tRNA 2-thiocytidine biosynthesis protein TtcA, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
Length = 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 15 VGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 74
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 75 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 127
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 128 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 185
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 186 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 237
>gi|418845259|ref|ZP_13400045.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418860391|ref|ZP_13414970.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418866837|ref|ZP_13421298.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|392814068|gb|EJA70032.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392827119|gb|EJA82837.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392839949|gb|EJA95487.1| C32 tRNA thiolase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
Length = 311
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 48 IHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYR 107
+ + I + + G+RI + SGGKDS + +L L + L +++D+ G+
Sbjct: 26 VGKAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFP 85
Query: 108 DDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGAS 167
+ L Q G+ KIV ++ YG ++I + K C+ C RR L R A+
Sbjct: 86 EHILPAYLE---QLGVEYKIVE-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTAT 138
Query: 168 LLKVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEI 227
L KIA GH+ DDI +T+ LN+ G + L++ +DG +P Y EK+I
Sbjct: 139 ELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMS--DDGKHIVIRPLAYCREKDI 196
Query: 228 MFTYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
+ +A K C PN R + ++D ++ P I + + +N
Sbjct: 197 V-RFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQN 248
>gi|422922734|ref|ZP_16955911.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
BJG-01]
gi|341644992|gb|EGS69149.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
BJG-01]
Length = 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D KV K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYSIVQD---KVPEGKTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|153217159|ref|ZP_01950923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153803581|ref|ZP_01958167.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153827170|ref|ZP_01979837.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153830588|ref|ZP_01983255.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229515797|ref|ZP_04405256.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TMA 21]
gi|229523484|ref|ZP_04412889.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae bv.
albensis VL426]
gi|254286121|ref|ZP_04961081.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|262190246|ref|ZP_06048519.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae CT
5369-93]
gi|297579020|ref|ZP_06940948.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417824484|ref|ZP_12471074.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE48]
gi|419836278|ref|ZP_14359720.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46B1]
gi|421342857|ref|ZP_15793262.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43B1]
gi|421351195|ref|ZP_15801560.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-25]
gi|423735186|ref|ZP_17708389.1| PP-loop family protein [Vibrio cholerae HC-41B1]
gi|424009115|ref|ZP_17752057.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-44C1]
gi|429884858|ref|ZP_19366465.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae PS15]
gi|124113825|gb|EAY32645.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124120879|gb|EAY39622.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|148873915|gb|EDL72050.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149738932|gb|EDM53254.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423790|gb|EDN15731.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229337065|gb|EEO02082.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae bv.
albensis VL426]
gi|229347566|gb|EEO12526.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TMA 21]
gi|262033864|gb|EEY52331.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae CT
5369-93]
gi|297536614|gb|EFH75447.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340047488|gb|EGR08412.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE48]
gi|395943374|gb|EJH54049.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43B1]
gi|395951640|gb|EJH62254.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-25]
gi|408630222|gb|EKL02850.1| PP-loop family protein [Vibrio cholerae HC-41B1]
gi|408857756|gb|EKL97438.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46B1]
gi|408864626|gb|EKM04056.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-44C1]
gi|429228374|gb|EKY34296.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae PS15]
Length = 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 50 QVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDD 109
Q I + + G+RI + SGGKDS + +L L + +L +++D+ G+ +
Sbjct: 29 QAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLDQKQPGFPEH 88
Query: 110 SLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLL 169
L + G+ KIV +D Y D KV K C C RR L R A L
Sbjct: 89 VLPEYLES---LGVEYKIVE-EDTYSIVQD---KVPEGKTTCALCSRLRRGILYRTAKEL 141
Query: 170 KVDKIATGHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMF 229
KIA GH+ DDI ET+ LN+ G + L++ ++G +P Y EK+I+
Sbjct: 142 GATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVS--DNGEHVVIRPLAYCREKDII- 198
Query: 230 TYAYFKRLDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEN 279
Y+ + C PN R ++ + D ++ P I + ++ +N
Sbjct: 199 KYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
>gi|205830656|sp|A5UBX9.2|TTCA_HAEIE RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
Length = 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 11/228 (4%)
Query: 57 LFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKR 116
+ + G+++ + SGGKDS L +L L + D+ +++D+ G+ + L
Sbjct: 35 MIEDGDKVMVCLSGGKDSYTLLDILLNLQQSAPIKFDIVAVNLDQKQPGFPEHVLPEYLE 94
Query: 117 NEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIAT 176
+ G+ KIV ++ YG ++I + K C+ C RR L R A+ L KIA
Sbjct: 95 S---IGVDYKIVQ-ENTYGIVKEKIPEG---KTTCSLCSRLRRGILYRTATELGATKIAL 147
Query: 177 GHNADDIAETVLLNILRGDIARLSRCTLITTGEDGPIPRCKPFKYTYEKEIMFTYAYFKR 236
GH+ DD+ T+ LN+ G + LI+ +DG +P Y EK+I YA K+
Sbjct: 148 GHHRDDMLATLFLNMFYGGKMKSMPPKLIS--DDGKQIVIRPLAYCKEKDIE-KYAIAKK 204
Query: 237 LDYFSTE-CIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGENFRIS 283
C PN R +E + +R P + + + +N +S
Sbjct: 205 FPIIPCNLCGSQPNLQRQVVKEMLNTWDRQYPGRLETMFSAMQNITLS 252
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,434,542,455
Number of Sequences: 23463169
Number of extensions: 225327956
Number of successful extensions: 494882
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2233
Number of HSP's successfully gapped in prelim test: 1697
Number of HSP's that attempted gapping in prelim test: 487618
Number of HSP's gapped (non-prelim): 4260
length of query: 357
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 214
effective length of database: 9,003,962,200
effective search space: 1926847910800
effective search space used: 1926847910800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)