BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041172
(141 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543933|ref|XP_002513029.1| protein with unknown function [Ricinus communis]
gi|223548040|gb|EEF49532.1| protein with unknown function [Ricinus communis]
Length = 143
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 79/147 (53%), Gaps = 24/147 (16%)
Query: 1 MDVLGVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAA 60
MDVLGV MK RK + KR KK +KVVYISSP+K ET ASKFRALVQELTGKDSD
Sbjct: 1 MDVLGVN-MKSRKQAS--KRSKKGIKVVYISSPMKVETSASKFRALVQELTGKDSD---- 53
Query: 61 AHRFSDTNSADDQNSPKVVVDQGLACAVSGDDHQQGDLRSSPSMEDQFD----------- 109
A RF D N+ + S + D+ A + D+H L S +
Sbjct: 54 AARFMDVNNGAENYSTETTPDRSRAAS---DEHGSVLLPLMSSYNEPSFSSSPDSDSSIF 110
Query: 110 ---DLFMPHGEGSFLGMFTSNLFHHDF 133
D F+P EGSF+ MF SN H F
Sbjct: 111 DPFDRFLPPMEGSFMSMFQSNFPHESF 137
>gi|224072929|ref|XP_002303937.1| predicted protein [Populus trichocarpa]
gi|222841369|gb|EEE78916.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 1 MDVLGVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAA 60
MDVLG MK K + + KR KK +KVVYISSP+K +T ASKFRALVQELTGKDSDA+
Sbjct: 1 MDVLGAN-MKSGKRS-HTKRGKKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAE-- 56
Query: 61 AHRFSDTNSADDQ-NSPKVVVD----QGLACAVSGDDHQQGDLRSSPSMEDQFDDLFMPH 115
RF D N A D P + + + + Q SS S D F P
Sbjct: 57 --RFMDINGARDSLEIPHQTAEYDHHPSVFPLTNSCNDQSPSTTSSESFLGSLDGEFFPS 114
Query: 116 GEGSFLGMFTSNLFHHDFNF 135
EGSF+GM +LFH F
Sbjct: 115 MEGSFMGMLQPSLFHESFQL 134
>gi|224137696|ref|XP_002322621.1| predicted protein [Populus trichocarpa]
gi|222867251|gb|EEF04382.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 5 GVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRF 64
GVQ+ RK K KK +KVVYIS+P+KF+ AS FRALVQELTG+DS+
Sbjct: 12 GVQE---RKGTKIAKTKKKPMKVVYISNPMKFKISASGFRALVQELTGQDSELPDPTKIV 68
Query: 65 SD------TNSADDQNSPKVVVDQGLACAVSGDDHQQGDLRSSPSMED----QFDDLFMP 114
D N N+ K VVD A V D Q P+ +D FDD+FMP
Sbjct: 69 DDDDHGVGGNYRTVSNASKTVVDDHCALEVPTKDPSQ---EQPPARQDAPFGSFDDVFMP 125
Query: 115 HGEGSFLGMFTSNLFHHDFNF 135
+ G+ SN ++ +++
Sbjct: 126 QMLENVAGIMPSNSWYEAYSY 146
>gi|224089971|ref|XP_002308886.1| predicted protein [Populus trichocarpa]
gi|222854862|gb|EEE92409.1| predicted protein [Populus trichocarpa]
Length = 154
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 5 GVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRF 64
GVQ+ K + + KK +KVVYIS+P+KF+ AS+FRALVQELTG+DS+ + +F
Sbjct: 12 GVQEKKAHRIAGTGTK-KKPMKVVYISNPMKFKASASEFRALVQELTGQDSELPDPS-KF 69
Query: 65 SDTNSAD----------DQNSPKVVVDQGLACAVSGDDHQQGDLRSSPSMEDQFDDLFMP 114
D++ D S VVVD G A V +D Q + + FDD+FMP
Sbjct: 70 VDSDGHDRDVGGNYQTVPNASKSVVVDGGHAQEVPIEDPSQVQPERQDAPFESFDDVFMP 129
Query: 115 HGEGSFLGMFTSNLFHHDFN 134
S L++ +N
Sbjct: 130 QMLEDISEKMPSKLWYEAYN 149
>gi|147774033|emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
Length = 124
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQGL 84
VKVVYISSP+K +T ASKFRALVQELTG+DSD + R+ + N +++ V+ DQGL
Sbjct: 12 VKVVYISSPMKVKTSASKFRALVQELTGRDSDVE----RYME-NKEREESRKMVMGDQGL 66
Query: 85 ACAVSGDDHQQGDLRSSPSMEDQFD-DLFMPHGEGSFLGMFTSNLF 129
DH S + FD D FMP E +GM + F
Sbjct: 67 GAV----DHSS--SSSESLLFGLFDMDSFMPREEEGSVGMMFPSSF 106
>gi|388493616|gb|AFK34874.1| unknown [Lotus japonicus]
Length = 120
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 3 VLGVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAH 62
+LGV + K K+ KK++KV YISSP+K +T AS FRALVQELTG+DS+ A
Sbjct: 1 MLGVSNNHVMKGKRQGKKNKKEIKVTYISSPMKVKTSASNFRALVQELTGQDSN---VAE 57
Query: 63 RFSDTNSA 70
F + N A
Sbjct: 58 TFVEANGA 65
>gi|270309002|dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 71/145 (48%), Gaps = 25/145 (17%)
Query: 1 MDVLGVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAA 60
M+V G +Q K + K D KVVYISSP+K +T ASKFR+LVQ LTG+DSDA+
Sbjct: 1 MNVTGKKQAKRSR-----KSAAADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAE-- 53
Query: 61 AHRFSD--TNSADDQNSPKVVVDQGLACAVSGDDH-------QQGDLRSSPSMEDQFDDL 111
RF + ++A D+N + GDD + SS + DDL
Sbjct: 54 --RFMELTASAASDRNLQSSASATFFDYQLLGDDDLVVAGKVETAAYESSVAALPPPDDL 111
Query: 112 FMPHG-EGSFLGMFTSNLFHHDFNF 135
+ H + SF GMF H F F
Sbjct: 112 AVLHNLDASFGGMF------HGFWF 130
>gi|351721456|ref|NP_001235674.1| uncharacterized protein LOC100306482 [Glycine max]
gi|255628679|gb|ACU14684.1| unknown [Glycine max]
Length = 123
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 9 MKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDA 57
MK ++ +N KR KKD+KV YISSPVK +T AS FRALVQELTG+ S+
Sbjct: 1 MKNKRASN--KRDKKDIKVTYISSPVKVKTSASNFRALVQELTGQYSNV 47
>gi|356556796|ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783939 [Glycine max]
Length = 122
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 9 MKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDA 57
MK ++ +N KR KK++KV YISSPVK +T AS FRALVQELTG+ S+
Sbjct: 1 MKNKRASN--KRDKKEIKVTYISSPVKVKTSASNFRALVQELTGQYSNV 47
>gi|357515269|ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago truncatula]
gi|355521945|gb|AET02399.1| hypothetical protein MTR_8g040080 [Medicago truncatula]
Length = 118
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 13 KHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDA 57
K+ K+ KKD+KV YISSPVK +T AS FRALVQELTG+DS+
Sbjct: 2 KNKRMSKKDKKDIKVTYISSPVKVKTNASNFRALVQELTGQDSNV 46
>gi|449449264|ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
[Cucumis sativus]
gi|449487122|ref|XP_004157503.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
[Cucumis sativus]
Length = 140
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 4/44 (9%)
Query: 19 KRCKKDV----KVVYISSPVKFETCASKFRALVQELTGKDSDAD 58
KR KK KVVYISSP+K +T ASKFR+LVQ+LTG+DSDA+
Sbjct: 10 KRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAE 53
>gi|357509423|ref|XP_003625000.1| hypothetical protein MTR_7g089860 [Medicago truncatula]
gi|355500015|gb|AES81218.1| hypothetical protein MTR_7g089860 [Medicago truncatula]
Length = 165
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSD---TNSADDQNSPKVVVD 81
+KVVYIS+P+K +T AS+FRALVQELTG+ +++ RF + +S DQ + ++D
Sbjct: 42 IKVVYISNPMKVKTSASEFRALVQELTGQYAESPPNPSRFQEFDVNDSGTDQGGCENMMD 101
Query: 82 --------QGLACAVSGDDHQQGDLRSSPSMEDQFDD--LFMPHGEGSFLGMFTSNLFHH 131
G+ V DD +G + S + FD+ L MP + + ++ F+
Sbjct: 102 CDKSDQTVVGVPSLVDPDD--KGKPSEAGSSNESFDEDVLLMPEMMDNIWDLLPTSAFYE 159
Query: 132 DFNF 135
F
Sbjct: 160 SFQL 163
>gi|297820442|ref|XP_002878104.1| hypothetical protein ARALYDRAFT_486111 [Arabidopsis lyrata subsp.
lyrata]
gi|297323942|gb|EFH54363.1| hypothetical protein ARALYDRAFT_486111 [Arabidopsis lyrata subsp.
lyrata]
Length = 155
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 23 KDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQ 82
K +KV YIS+P++ +TCASKFR LVQELTG+D+ D +S D SP +
Sbjct: 38 KPIKVRYISNPMRVQTCASKFRELVQELTGQDA-VDLQPEPIYSPSSDDHNLSPPPFTAE 96
Query: 83 GLACAV---SGDDHQQGDLRSSPSMEDQFDDLFMPHGEGSFLGMFTSNLFHH 131
L V D + GD P +++F+P + F SN F++
Sbjct: 97 NLEPRVLHQEPFDERVGDCYVPPL---NGEEMFLPDQMSAGFSGFFSNAFYN 145
>gi|226530791|ref|NP_001150250.1| VQ motif family protein [Zea mays]
gi|195637802|gb|ACG38369.1| VQ motif family protein [Zea mays]
Length = 180
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
RKH KK +KVVYIS+PV+ +T A+ FRALVQELTG+D+D
Sbjct: 29 RKHKG---GGKKPIKVVYISNPVRVKTSAAGFRALVQELTGRDAD 70
>gi|356571935|ref|XP_003554126.1| PREDICTED: uncharacterized protein LOC100808231 [Glycine max]
Length = 168
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRF 64
VKVVYIS+P+K +T AS+FRALVQELTG+D+++ RF
Sbjct: 32 VKVVYISNPMKIKTSASEFRALVQELTGQDAESPPDPSRF 71
>gi|413952153|gb|AFW84802.1| hypothetical protein ZEAMMB73_755935, partial [Zea mays]
Length = 178
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
RKH KK +KVVYIS+PV+ +T A+ FRALVQELTG+D+D
Sbjct: 29 RKHKG---GGKKPIKVVYISNPVRVKTSAAGFRALVQELTGRDAD 70
>gi|388494456|gb|AFK35294.1| unknown [Medicago truncatula]
Length = 135
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 24 DVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADD-QNSPKVVVDQ 82
+VKV YISSP+K +T AS FRALVQELTG+DS+ +D DD QN K ++Q
Sbjct: 28 EVKVTYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQ 87
>gi|357456359|ref|XP_003598460.1| Sigma factor binding protein [Medicago truncatula]
gi|355487508|gb|AES68711.1| Sigma factor binding protein [Medicago truncatula]
Length = 128
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 24 DVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADD-QNSPKVVVDQ 82
+VKV YISSP+K +T AS FRALVQELTG+DS+ +D DD QN K ++Q
Sbjct: 21 EVKVTYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQ 80
>gi|15228994|ref|NP_191230.1| sigma factor binding protein 1 [Arabidopsis thaliana]
gi|75173827|sp|Q9LDH1.1|SIB1_ARATH RecName: Full=Sigma factor binding protein 1, chloroplastic;
Short=AtsibI; Short=Sigma factor binding protein I;
AltName: Full=SigA binding protein; Flags: Precursor
gi|6980074|gb|AAF34713.1|AF224762_1 SigA binding protein [Arabidopsis thaliana]
gi|9662990|emb|CAC00734.1| SigA binding protein [Arabidopsis thaliana]
gi|14596087|gb|AAK68771.1| SigA binding protein [Arabidopsis thaliana]
gi|27312003|gb|AAO00967.1| SigA binding protein [Arabidopsis thaliana]
gi|332646033|gb|AEE79554.1| sigma factor binding protein 1 [Arabidopsis thaliana]
Length = 151
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 23 KDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQ 82
K +KV YIS+P++ +TCASKFR LVQELTG+D+ D +S D SP +
Sbjct: 38 KPIKVRYISNPMRVQTCASKFRELVQELTGQDA-VDLQPEPIYSPSSDDHNLSPPA---E 93
Query: 83 GLACAVSGDDHQQ--GDLRSSPSMEDQFDDLFMPHGEGSFLGMFTSNLFHH 131
LA V HQ+ G+ S +D+F+P + F SN F++
Sbjct: 94 NLAPRVL---HQEPFGERDSDCYEPLNAEDMFLPDQMSAGFSGFFSNGFYN 141
>gi|297724085|ref|NP_001174406.1| Os05g0390800 [Oryza sativa Japonica Group]
gi|255676332|dbj|BAH93134.1| Os05g0390800 [Oryza sativa Japonica Group]
Length = 169
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQGL 84
+KVVYIS+P++ T A+ FRALVQELTG+++D + R S + DD + D G
Sbjct: 43 IKVVYISNPMRVRTSAAGFRALVQELTGRNADPSKYSPRAS---AGDDGGGATALPDTGA 99
Query: 85 AC 86
A
Sbjct: 100 AS 101
>gi|297824061|ref|XP_002879913.1| hypothetical protein ARALYDRAFT_483187 [Arabidopsis lyrata subsp.
lyrata]
gi|297325752|gb|EFH56172.1| hypothetical protein ARALYDRAFT_483187 [Arabidopsis lyrata subsp.
lyrata]
Length = 140
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 23 KDVKVVYISSPVKFETCASKFRALVQELTGKDS 55
K +KV YIS+P++ ETC SKFR LVQELTG+D+
Sbjct: 35 KPIKVRYISNPMRVETCPSKFRELVQELTGQDA 67
>gi|18405627|ref|NP_030663.1| VQ motif-containing protein [Arabidopsis thaliana]
gi|75099858|sp|O80669.1|SIB2_ARATH RecName: Full=Sigma factor binding protein 2, chloroplastic;
Short=Sigma factor binding protein II; Flags: Precursor
gi|3402700|gb|AAD11994.1| expressed protein [Arabidopsis thaliana]
gi|16323165|gb|AAL15317.1| At2g41180/T3K9.5 [Arabidopsis thaliana]
gi|20466638|gb|AAM20636.1| unknown protein [Arabidopsis thaliana]
gi|23198166|gb|AAN15610.1| unknown protein [Arabidopsis thaliana]
gi|330254847|gb|AEC09941.1| VQ motif-containing protein [Arabidopsis thaliana]
Length = 141
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 23 KDVKVVYISSPVKFETCASKFRALVQELTGKDS 55
K +KV YIS+P++ ETC SKFR LVQELTG+D+
Sbjct: 35 KPIKVRYISNPMRVETCPSKFRELVQELTGQDA 67
>gi|57863787|gb|AAS86393.2| hypothetical protein [Oryza sativa Japonica Group]
Length = 168
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQGL 84
+KVVYIS+P++ T A+ FRALVQELTG+++D + R S + DD + D G
Sbjct: 43 IKVVYISNPMRVRTSAAGFRALVQELTGRNADPSKYSPRAS---AGDDGGGATALPDTGA 99
Query: 85 AC 86
A
Sbjct: 100 AS 101
>gi|218196731|gb|EEC79158.1| hypothetical protein OsI_19832 [Oryza sativa Indica Group]
Length = 243
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQGL 84
+KVVYIS+P++ T A+ FRALVQELTG+++D + R S + DD + + D G
Sbjct: 120 IKVVYISNPMRVRTSAAGFRALVQELTGRNADPSKYSPRAS---AGDDGSGATALPDTGA 176
Query: 85 A 85
A
Sbjct: 177 A 177
>gi|359482243|ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243497 [Vitis vinifera]
Length = 143
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 26 KVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVVDQG-L 84
KVVYI +P + S+FRALVQELTG+D+D + +Q P V ++ L
Sbjct: 27 KVVYIGNPRMVKVKESEFRALVQELTGQDADISDPTVFEEIHDVGGNQKVPDVANNENEL 86
Query: 85 ACAVSGDDHQQGDLRSSPSMED----QFDDLFMPHGEGSFLGMFTSNLFHH 131
V D +GD P M D Q DD+F P +F G+ S L++
Sbjct: 87 ELDVPPVD--RGD--EPPQMSDIPMEQLDDVFTPQLLENFTGLLQSTLWYE 133
>gi|357131173|ref|XP_003567215.1| PREDICTED: uncharacterized protein LOC100832135 [Brachypodium
distachyon]
Length = 162
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYIS+P++ +T A+ FRALVQELTG+D+D
Sbjct: 41 IKVVYISNPMRVKTSAAGFRALVQELTGRDAD 72
>gi|255562356|ref|XP_002522185.1| conserved hypothetical protein [Ricinus communis]
gi|223538623|gb|EEF40226.1| conserved hypothetical protein [Ricinus communis]
Length = 146
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 20 RCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADA 59
+ K+ +KVVYIS+P+KF+ AS+FRALVQELTG+ S+ A
Sbjct: 15 KKKQPMKVVYISNPMKFKISASEFRALVQELTGQYSELPA 54
>gi|242054723|ref|XP_002456507.1| hypothetical protein SORBIDRAFT_03g037575 [Sorghum bicolor]
gi|241928482|gb|EES01627.1| hypothetical protein SORBIDRAFT_03g037575 [Sorghum bicolor]
Length = 181
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYIS+P++ +T A+ FRALVQELTG+D+D
Sbjct: 42 IKVVYISNPMRVKTSAAGFRALVQELTGRDAD 73
>gi|115440593|ref|NP_001044576.1| Os01g0808900 [Oryza sativa Japonica Group]
gi|20160684|dbj|BAB89627.1| unknown protein [Oryza sativa Japonica Group]
gi|113534107|dbj|BAF06490.1| Os01g0808900 [Oryza sativa Japonica Group]
Length = 184
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFS 65
+KVVYIS+P++ +T A+ FRALVQELTG+++D + R S
Sbjct: 39 IKVVYISNPMRVKTSAAGFRALVQELTGRNADPSKYSPRAS 79
>gi|255561885|ref|XP_002521951.1| conserved hypothetical protein [Ricinus communis]
gi|223538755|gb|EEF40355.1| conserved hypothetical protein [Ricinus communis]
Length = 133
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 QQMKIRKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDS 55
QQ ++ K + K KK VK+ YIS+P T AS+FRA+VQELTGKDS
Sbjct: 10 QQGQLPKSQKHTKNKKKPVKITYISNPTLVRATNASEFRAIVQELTGKDS 59
>gi|222631473|gb|EEE63605.1| hypothetical protein OsJ_18422 [Oryza sativa Japonica Group]
Length = 132
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFS 65
+KVVYIS+P++ T A+ FRALVQELTG+++D + R S
Sbjct: 43 IKVVYISNPMRVRTSAAGFRALVQELTGRNADPSKYSPRAS 83
>gi|242041113|ref|XP_002467951.1| hypothetical protein SORBIDRAFT_01g037040 [Sorghum bicolor]
gi|241921805|gb|EER94949.1| hypothetical protein SORBIDRAFT_01g037040 [Sorghum bicolor]
Length = 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYISSP+K A +FRA+VQELTG+DS+
Sbjct: 52 IKVVYISSPMKLTASAEEFRAIVQELTGRDSN 83
>gi|108707848|gb|ABF95643.1| VQ motif family protein, expressed [Oryza sativa Japonica Group]
Length = 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYISSP+K A +FRA+VQELTG+DS+
Sbjct: 44 IKVVYISSPMKLTASAEEFRAVVQELTGRDSN 75
>gi|125528094|gb|EAY76208.1| hypothetical protein OsI_04144 [Oryza sativa Indica Group]
Length = 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYIS+P++ +T A+ FRALVQELTG+++D
Sbjct: 39 IKVVYISNPMRVKTSAAGFRALVQELTGRNAD 70
>gi|413955883|gb|AFW88532.1| hypothetical protein ZEAMMB73_693889 [Zea mays]
Length = 181
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYISSP+K A +FRA+VQELTG+DS+
Sbjct: 50 IKVVYISSPMKLTASAEEFRAVVQELTGRDSN 81
>gi|218192708|gb|EEC75135.1| hypothetical protein OsI_11326 [Oryza sativa Indica Group]
Length = 171
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+KVVYISSP+K A +FRA+VQELTG+DS+
Sbjct: 39 IKVVYISSPMKLTASAEEFRAVVQELTGRDSN 70
>gi|242042103|ref|XP_002468446.1| hypothetical protein SORBIDRAFT_01g046040 [Sorghum bicolor]
gi|241922300|gb|EER95444.1| hypothetical protein SORBIDRAFT_01g046040 [Sorghum bicolor]
Length = 155
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 22 KKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+K +KV+YI +P++ +T A+ FRALVQELTG+ +D
Sbjct: 31 RKPIKVLYIDNPMRVKTSAAGFRALVQELTGRHAD 65
>gi|224139122|ref|XP_002326773.1| predicted protein [Populus trichocarpa]
gi|222834095|gb|EEE72572.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
R+ N K K+ VK+ YISSP+ + T AS+FR +VQELTGKDS +
Sbjct: 15 RRGKNPTKHRKEPVKITYISSPMMVKATNASEFRVIVQELTGKDSKVE 62
>gi|224138762|ref|XP_002322895.1| predicted protein [Populus trichocarpa]
gi|222867525|gb|EEF04656.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
R+ K K+ VK+ YISSP + T AS+FRA+VQELTGKDS +
Sbjct: 15 RRGKKPTKHKKEPVKITYISSPTMVKATNASEFRAIVQELTGKDSKVE 62
>gi|224116108|ref|XP_002331999.1| predicted protein [Populus trichocarpa]
gi|222874767|gb|EEF11898.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
R+ K K+ VK+ YISSP + T AS+FRA+VQELTGKDS +
Sbjct: 15 RRGKKPTKHKKEPVKITYISSPTMVKATNASEFRAIVQELTGKDSKVE 62
>gi|297604684|ref|NP_001055911.2| Os05g0491700 [Oryza sativa Japonica Group]
gi|125552815|gb|EAY98524.1| hypothetical protein OsI_20436 [Oryza sativa Indica Group]
gi|222632065|gb|EEE64197.1| hypothetical protein OsJ_19029 [Oryza sativa Japonica Group]
gi|255676458|dbj|BAF17825.2| Os05g0491700 [Oryza sativa Japonica Group]
Length = 188
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 22 KKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNS 75
++++KVVYI++P++ T FRALVQELTG+ AD + +R + D+ S
Sbjct: 45 RREIKVVYIANPMRVTTSEEGFRALVQELTGR--HADPSKYRGGGGGAPVDETS 96
>gi|224077500|ref|XP_002305274.1| predicted protein [Populus trichocarpa]
gi|222848238|gb|EEE85785.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
R+ K K+ VK+ YISSP + T AS+FRA+VQELTGKDS +
Sbjct: 15 RRGKKPTKHKKEPVKITYISSPTMVKATNASEFRAIVQELTGKDSKVE 62
>gi|414865022|tpg|DAA43579.1| TPA: hypothetical protein ZEAMMB73_987520, partial [Zea mays]
Length = 189
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSPKVVV 80
+KV+YI++P++ +T A FRALVQELTG+ +D + D+ +A SP+ V
Sbjct: 34 IKVLYIANPMRVQTSAEGFRALVQELTGQHADPSKYSPGDLDSGAAAQGLSPRARV 89
>gi|22324437|dbj|BAC10354.1| unknown protein [Oryza sativa Japonica Group]
gi|50509155|dbj|BAD30295.1| unknown protein [Oryza sativa Japonica Group]
gi|125601573|gb|EAZ41149.1| hypothetical protein OsJ_25645 [Oryza sativa Japonica Group]
Length = 137
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 20 RCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+C V+VVYI+SP+K +FRA+VQELTG+ S+
Sbjct: 34 QCPGAVRVVYIASPMKLTASPEEFRAVVQELTGRHSN 70
>gi|223945001|gb|ACN26584.1| unknown [Zea mays]
Length = 172
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGK----------DSDADAAAHRFSDTNSADDQN 74
+KV+YI++P++ +T A FRALVQELTG+ D D+ AAA S D +
Sbjct: 34 IKVLYIANPMRVQTSAEGFRALVQELTGQHADPSKYSPGDLDSGAAAQGLSPRARVADVS 93
Query: 75 SPKVVVDQ--GLACAVSGDDHQQGDLRSSPSMEDQFDDLFM-PH 115
S +V G A G D+ +E+ DD+F PH
Sbjct: 94 SETIVASHSPGSKAAPHGGDYYD--------VEEDEDDVFRSPH 129
>gi|226504122|ref|NP_001150511.1| VQ motif family protein [Zea mays]
gi|195639770|gb|ACG39353.1| VQ motif family protein [Zea mays]
Length = 172
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTGK----------DSDADAAAHRFSDTNSADDQN 74
+KV+YI++P++ +T A FRALVQELTG+ D D+ AAA S D +
Sbjct: 34 IKVLYIANPMRVQTSAEGFRALVQELTGQHADPSKYSPDDLDSGAAAQGLSPRARVADVS 93
Query: 75 SPKVVVDQ--GLACAVSGDDHQQGDLRSSPSMEDQFDDLFM-PH 115
S +V G A G D+ +E+ DD+F PH
Sbjct: 94 SETIVASHSPGSKAAPHGGDYYD--------VEEDEDDVFRSPH 129
>gi|125559664|gb|EAZ05200.1| hypothetical protein OsI_27399 [Oryza sativa Indica Group]
Length = 136
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 20 RCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+C V+VVYI+SP+K +FRA+VQELTG+ S+
Sbjct: 34 QCPGAVRVVYIASPMKLTASPEEFRAVVQELTGRHSN 70
>gi|297607828|ref|NP_001060693.2| Os07g0687400 [Oryza sativa Japonica Group]
gi|255678074|dbj|BAF22607.2| Os07g0687400 [Oryza sativa Japonica Group]
Length = 130
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 19 KRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+C V+VVYI+SP+K +FRA+VQELTG+ S+
Sbjct: 33 PQCPGAVRVVYIASPMKLTASPEEFRAVVQELTGRHSN 70
>gi|224155551|ref|XP_002337613.1| predicted protein [Populus trichocarpa]
gi|222839675|gb|EEE77998.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 12 RKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
R+ K K+ VK+ YISSP + T AS+FRA+VQELTGKDS +
Sbjct: 15 RRGKKPTKHKKEPVKITYISSPTMVKATNASEFRAIVQELTGKDSKVE 62
>gi|357167152|ref|XP_003581028.1| PREDICTED: uncharacterized protein LOC100827740 [Brachypodium
distachyon]
Length = 133
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 25 VKVVYISSPVKFETCASKFRALVQELTG 52
+KVVYIS+PV+ +T A+ FRALVQELTG
Sbjct: 38 IKVVYISNPVRVKTTAAGFRALVQELTG 65
>gi|224115942|ref|XP_002332009.1| predicted protein [Populus trichocarpa]
gi|222875234|gb|EEF12365.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 7 QQMKIRKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
QQ + +K K ++ +K+ YISSP + T A++FRA+VQELTGKDS +
Sbjct: 11 QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVE 63
>gi|255561887|ref|XP_002521952.1| conserved hypothetical protein [Ricinus communis]
gi|223538756|gb|EEF40356.1| conserved hypothetical protein [Ricinus communis]
Length = 136
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 16 NYYKRCKKDVKVVYISSPVKFETC-ASKFRALVQELTGKDS 55
N K KK +K+ YISSP AS+FRA+VQELTGKDS
Sbjct: 21 NPSKNRKKPIKITYISSPTMVRAANASEFRAIVQELTGKDS 61
>gi|226528675|ref|NP_001149386.1| VQ motif family protein [Zea mays]
gi|195626856|gb|ACG35258.1| VQ motif family protein [Zea mays]
gi|238009400|gb|ACR35735.1| unknown [Zea mays]
gi|413949730|gb|AFW82379.1| putative VQ motif family protein [Zea mays]
Length = 156
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 22 KKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
K +KVV++ +PV+ +T + FRALVQELTG+ +D
Sbjct: 38 KPPIKVVFVGNPVRVKTSVAGFRALVQELTGRHAD 72
>gi|357128885|ref|XP_003566100.1| PREDICTED: uncharacterized protein LOC100826333 [Brachypodium
distachyon]
Length = 159
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 19 KRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSADDQNSP 76
K + +KVVY+++P++ T A+ FRALVQELTG+ +D A + T S + SP
Sbjct: 31 KGGGEPIKVVYVNNPMRVTTDAAGFRALVQELTGRHAD---PAKYGAGTVSGESSGSP 85
>gi|224115954|ref|XP_002332012.1| predicted protein [Populus trichocarpa]
gi|222875237|gb|EEF12368.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 7 QQMKIRKHNNYYKRCKKDVKVVYISSPVKFE-TCASKFRALVQELTGKDSDAD 58
QQ + +K K ++ +K+ YISSP + T A++FRA+VQELTGKDS +
Sbjct: 11 QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVE 63
>gi|414866533|tpg|DAA45090.1| TPA: hypothetical protein ZEAMMB73_512626 [Zea mays]
Length = 168
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 5 GVQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
GV + + + K VKVVYISSP+K A +FRA+VQELTG+DS+
Sbjct: 19 GVSKPPVARRRQSGGGGGKGVKVVYISSPMKLTASAEEFRAIVQELTGRDSN 70
>gi|297739837|emb|CBI30019.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 9 MKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTN 68
+ + H++ + K +++++I +P +T FR LVQ LTGK S AD + N
Sbjct: 16 LPMHNHSHTISKVKPKIRIIHIFAPEIIKTDVENFRELVQRLTGKPSAADKGCRK---KN 72
Query: 69 SADDQNSPKVVVDQGLACAVSGDDHQQGD-------LRSSPSMEDQFDDLFMPHGEGSFL 121
A K V + +A V + H L+ + + F DLF+ G G+
Sbjct: 73 MARGVVCNKGVGKKKMA-EVCTEFHMSMALHLNIFLLQVTEYINLFFKDLFVSFGCGTSF 131
Query: 122 GMFTSNLFHHDFNFQQDLAL 141
+F H F LAL
Sbjct: 132 LLFPFGSLHMPHIFIDVLAL 151
>gi|224139800|ref|XP_002323282.1| predicted protein [Populus trichocarpa]
gi|222867912|gb|EEF05043.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 21/115 (18%)
Query: 11 IRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDTNSA 70
+ K+++ + K +++++I +P +T A+ FR LVQ LTGK SD + A
Sbjct: 1 MHKNSHTIAKVKPKIRIIHIFAPEIIKTDAANFRELVQRLTGKPSDQKGGCRQ--KPRRA 58
Query: 71 DDQNSPKVVVDQGLACAVSGDDHQQGDLRSSPSMEDQFDDLFMPHGEGSFLGMFT 125
Q+ P+ DL E+ ++ + GSFLG FT
Sbjct: 59 RTQDQPRNC---------------NSDLCEEKPEEEMWNGAY----SGSFLGGFT 94
>gi|169622244|ref|XP_001804531.1| hypothetical protein SNOG_14339 [Phaeosphaeria nodorum SN15]
gi|160704729|gb|EAT78210.2| hypothetical protein SNOG_14339 [Phaeosphaeria nodorum SN15]
Length = 832
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 28 VYISSPVKFETCASKFRALVQELTGKDSDADAAAH-----RFSDTNSADDQNSPKVVVD- 81
V++ + F C + +A +GKD+ + + S + S D SPK +D
Sbjct: 599 VWLDATEAFADCEGEGKAE----SGKDAKEEVKSEVSVPASASTSASVTDSASPKAKIDI 654
Query: 82 --QGLACAV----SGDDHQQGDLRSSPSMEDQFDDLFMPHGEG 118
+GL AV +GD+H L SS ME++FD PH G
Sbjct: 655 GSKGLVVAVLILQAGDEHPDNLLVSSEGMEEEFDGRIPPHCVG 697
>gi|297824447|ref|XP_002880106.1| VQ motif-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325945|gb|EFH56365.1| VQ motif-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 169
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 8 QMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHR 63
++ + K++ + K +++++I +P +T FR+LVQ LTGK + +A +
Sbjct: 16 RVSMNKNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGK 71
>gi|15224866|ref|NP_181962.1| VQ motif-containing protein [Arabidopsis thaliana]
gi|3128179|gb|AAC16083.1| hypothetical protein [Arabidopsis thaliana]
gi|330255315|gb|AEC10409.1| VQ motif-containing protein [Arabidopsis thaliana]
Length = 188
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 8 QMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFSDT 67
++ + +++ + K +++++I +P +T FR+LVQ LTGK + +A
Sbjct: 16 RVSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEA-------- 67
Query: 68 NSADDQNSPKVVVDQGLACAVSGDDHQ 94
+ + ++ Q C DDHQ
Sbjct: 68 KTGKKRAKSRITTPQEPVC----DDHQ 90
>gi|297817132|ref|XP_002876449.1| VQ motif-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297322287|gb|EFH52708.1| VQ motif-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 175
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 6 VQQMKIRKHNNYYKRCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSDADAAAHRFS 65
+ + + K + + K +++++I +P +T + FR LVQ LTGK D HR S
Sbjct: 13 LSSVAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDD-----HRTS 67
Query: 66 DTNSADD 72
T D
Sbjct: 68 KTKPRRD 74
>gi|388506534|gb|AFK41333.1| unknown [Lotus japonicus]
Length = 144
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 20 RCKKDVKVVYISSPVKFETCASKFRALVQELTGKDSD 56
+ K +++++I +P +T A+ FR LVQ LTGK D
Sbjct: 27 KLKPKIRIIHIYAPEIIKTDAANFRELVQRLTGKPED 63
>gi|302824815|ref|XP_002994047.1| hypothetical protein SELMODRAFT_138089 [Selaginella
moellendorffii]
gi|300138101|gb|EFJ04881.1| hypothetical protein SELMODRAFT_138089 [Selaginella
moellendorffii]
Length = 144
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 18 YKRCKKD--VKVVYISSPVKFETCASKFRALVQELTG 52
YKR K +KVV I +P T A+ FR LVQELTG
Sbjct: 3 YKRAKPRSVLKVVQIFNPTIIRTDAASFRELVQELTG 39
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,261,996,634
Number of Sequences: 23463169
Number of extensions: 90207782
Number of successful extensions: 258240
Number of sequences better than 100.0: 78
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 258166
Number of HSP's gapped (non-prelim): 79
length of query: 141
length of database: 8,064,228,071
effective HSP length: 105
effective length of query: 36
effective length of database: 9,895,562,622
effective search space: 356240254392
effective search space used: 356240254392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)