Query 041181
Match_columns 386
No_of_seqs 350 out of 1537
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 07:12:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 2.4E-35 8.3E-40 287.5 14.0 128 256-386 2-129 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 4.3E-35 1.5E-39 286.0 13.6 129 255-386 5-133 (319)
3 3grh_A YBHC, acyl-COA thioeste 100.0 6.2E-34 2.1E-38 283.8 11.6 130 255-386 73-244 (422)
4 3uw0_A Pectinesterase; right-h 100.0 2.2E-31 7.6E-36 263.6 11.9 126 255-386 29-177 (364)
5 2nsp_A Pectinesterase A; micha 100.0 1.8E-31 6.2E-36 262.8 10.4 125 256-386 3-151 (342)
6 1xg2_B Pectinesterase inhibito 100.0 1.3E-30 4.6E-35 227.7 12.6 147 36-195 4-150 (153)
7 1x91_A Invertase/pectin methyl 100.0 2.2E-30 7.4E-35 226.7 13.9 146 35-195 5-150 (153)
8 2cj4_A Invertase inhibitor; pr 100.0 9.6E-30 3.3E-34 222.0 12.2 144 35-194 4-148 (150)
9 1ru4_A Pectate lyase, PEL9A; p 99.3 1E-11 3.5E-16 124.6 13.3 116 255-386 13-148 (400)
10 1dbg_A Chondroitinase B; beta 99.1 2.7E-10 9.3E-15 117.2 10.8 105 258-386 25-137 (506)
11 2inu_A Insulin fructotransfera 98.4 3E-07 1E-11 91.3 7.0 94 290-386 58-182 (410)
12 2pyg_A Poly(beta-D-mannuronate 97.1 0.00087 3E-08 65.7 7.9 52 268-327 18-78 (377)
13 1pxz_A Major pollen allergen J 96.8 0.0046 1.6E-07 60.5 9.5 96 269-385 55-169 (346)
14 1qcx_A Pectin lyase B; beta-he 96.2 0.015 5E-07 57.2 9.2 60 311-385 109-172 (359)
15 3eqn_A Glucan 1,3-beta-glucosi 96.2 0.023 7.8E-07 60.5 11.0 107 269-385 66-192 (758)
16 1idk_A Pectin lyase A; signal, 95.7 0.029 9.9E-07 55.1 8.8 66 302-385 103-172 (359)
17 1pcl_A Pectate lyase E; lyase 95.2 0.13 4.4E-06 50.4 11.4 67 302-385 75-152 (355)
18 1bhe_A PEHA, polygalacturonase 95.1 0.11 3.7E-06 51.1 10.6 52 258-318 14-69 (376)
19 2iq7_A Endopolygalacturonase; 95.0 0.036 1.2E-06 53.9 6.8 84 269-361 8-123 (339)
20 1hg8_A Endopolygalacturonase; 95.0 0.073 2.5E-06 51.9 9.0 103 268-385 7-146 (349)
21 3zsc_A Pectate trisaccharide-l 94.7 0.12 4.1E-06 50.3 9.6 77 289-385 47-135 (340)
22 2o04_A Pectate lyase, PL; hexa 94.6 0.17 5.9E-06 50.3 10.7 63 309-385 126-202 (399)
23 1air_A Pectate lyase C, PELC; 94.6 0.13 4.6E-06 50.2 9.7 100 268-385 25-149 (353)
24 1pe9_A Pectate lyase A; parall 94.6 0.16 5.6E-06 49.8 10.3 81 287-385 52-163 (361)
25 2qy1_A Pectate lyase II; GAG l 94.4 0.085 2.9E-06 51.2 7.6 91 270-385 24-137 (330)
26 1nhc_A Polygalacturonase I; be 94.3 0.06 2E-06 52.2 6.4 102 269-385 8-141 (336)
27 1ia5_A Polygalacturonase; glyc 94.1 0.098 3.3E-06 50.8 7.4 84 269-361 12-127 (339)
28 3vmv_A Pectate lyase; polysacc 93.8 0.26 8.9E-06 47.6 9.7 95 271-385 30-140 (326)
29 1rmg_A Rgase A, rhamnogalactur 93.4 0.15 5.3E-06 50.9 7.7 42 269-318 37-80 (422)
30 1h80_A IOTA-carrageenase; hydr 93.3 0.34 1.1E-05 49.1 10.0 43 268-317 38-81 (464)
31 1czf_A Polygalacturonase II; b 93.2 0.2 6.9E-06 49.0 7.9 102 269-385 35-167 (362)
32 1vbl_A Pectate lyase 47; PL 47 92.0 0.82 2.8E-05 45.6 10.5 67 302-385 127-208 (416)
33 2uvf_A Exopolygalacturonase; G 91.2 0.83 2.9E-05 47.7 10.2 39 268-316 172-211 (608)
34 3eqn_A Glucan 1,3-beta-glucosi 90.9 1.4 4.7E-05 47.0 11.3 102 268-385 416-531 (758)
35 3gq8_A Preneck appendage prote 89.7 0.5 1.7E-05 49.3 6.8 46 269-327 39-86 (609)
36 3jur_A EXO-poly-alpha-D-galact 89.1 0.95 3.2E-05 45.6 8.1 41 270-318 45-86 (448)
37 1vcl_A Hemolytic lectin CEL-II 84.1 0.0056 1.9E-07 61.6 -11.4 93 258-361 293-394 (432)
38 3gqn_A Preneck appendage prote 83.6 1.2 4.3E-05 47.4 5.7 45 269-326 39-85 (772)
39 1k5c_A Endopolygalacturonase; 78.5 2.3 7.8E-05 41.0 5.3 26 269-300 8-33 (335)
40 2x6w_A Tail spike protein; vir 55.8 10 0.00036 39.3 4.7 42 269-318 64-119 (600)
41 1x0c_A Isopullulanase; glycosi 53.9 21 0.00073 36.6 6.7 17 344-360 290-306 (549)
42 2vbk_A Tailspike-protein; vira 46.9 15 0.00051 36.9 4.0 47 267-320 66-118 (514)
43 1ogo_X Dextranase; hydrolase, 41.9 69 0.0023 33.0 8.3 16 345-360 331-346 (574)
44 1dbg_A Chondroitinase B; beta 39.0 34 0.0012 34.8 5.4 44 340-386 119-169 (506)
45 1xg2_A Pectinesterase 1; prote 26.7 54 0.0019 31.1 4.2 40 340-386 111-150 (317)
46 2uvf_A Exopolygalacturonase; G 25.8 98 0.0034 31.9 6.3 37 347-385 520-562 (608)
47 2inu_A Insulin fructotransfera 25.3 4.5E+02 0.015 25.8 10.6 82 290-377 111-202 (410)
48 1gq8_A Pectinesterase; hydrola 23.3 54 0.0018 31.1 3.5 40 340-386 115-154 (319)
49 3cjh_B Mitochondrial import in 22.0 1.4E+02 0.0047 21.1 4.7 30 97-126 33-62 (64)
50 1k5c_A Endopolygalacturonase; 20.9 2.3E+02 0.0077 26.8 7.4 39 347-385 271-315 (335)
51 2nsp_A Pectinesterase A; micha 20.3 34 0.0012 32.9 1.4 37 343-386 136-172 (342)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=2.4e-35 Score=287.54 Aligned_cols=128 Identities=44% Similarity=0.755 Sum_probs=123.7
Q ss_pred eeeEEEcCCCCCCcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeEEeCCCCCceEEEecCCceeEEEccCCCCCCCC
Q 041181 256 TDIITVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVADGWT 335 (386)
Q Consensus 256 ~~~i~V~~~g~g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~ 335 (386)
+++++|++||+|+|+|||+||+++|++ +++|++|+|+||+|+|+|.|++.|++|+|+|+|+++|+|+|+++..+|++
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~ 78 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDK---SKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGST 78 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCC
T ss_pred CceEEECCCCCCCcccHHHHHhhcccC---CCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCc
Confidence 468999999999999999999999998 67899999999999999999999999999999999999999999889999
Q ss_pred ccceeEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 336 TFNSATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 336 t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
|+.++||.|.+++|+++||||+|++|+.++|||||++++|+++||||+|+|
T Consensus 79 t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g 129 (317)
T 1xg2_A 79 TFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDA 129 (317)
T ss_dssp SGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEEC
T ss_pred ccceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCc
Confidence 999999999999999999999999999889999999999999999999987
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=4.3e-35 Score=286.00 Aligned_cols=129 Identities=49% Similarity=0.797 Sum_probs=124.7
Q ss_pred eeeeEEEcCCCCCCcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeEEeCCCCCceEEEecCCceeEEEccCCCCCCC
Q 041181 255 VTDIITVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVADGW 334 (386)
Q Consensus 255 ~~~~i~V~~~g~g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~ 334 (386)
++++++|++||+|+|+|||+||+++|++ +++|++|+|+||+|+|+|.|++.|++|+|+|+|+++|+|+|+++..+|+
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~ 81 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPED---SKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGS 81 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTC
T ss_pred ccceEEECCCCCCCccCHHHHHHhcccc---CCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCC
Confidence 5679999999999999999999999998 6789999999999999999999999999999999999999999988999
Q ss_pred CccceeEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 335 TTFNSATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 335 ~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
+|++++||.|.+++|+++||||+|++|+.++|||||++++|+++||||+|+|
T Consensus 82 ~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g 133 (319)
T 1gq8_A 82 TTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILA 133 (319)
T ss_dssp CTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEEC
T ss_pred CccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECc
Confidence 9999999999999999999999999999889999999999999999999987
No 3
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=6.2e-34 Score=283.78 Aligned_cols=130 Identities=23% Similarity=0.257 Sum_probs=113.9
Q ss_pred eeeeEEEcCCCCC--CcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeEEeCCCCCceEEEecCCceeEEEccCC---
Q 041181 255 VTDIITVAQDGSG--NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRS--- 329 (386)
Q Consensus 255 ~~~~i~V~~~g~g--~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~~~t~I~~~~~--- 329 (386)
++++++|++||+| +|+|||+||+++|+.. +..|++|+|+||+|+|+|+||+.|++|||+|+|.++|+|++..+
T Consensus 73 ~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~--~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~ 150 (422)
T 3grh_A 73 AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKR--TNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDG 150 (422)
T ss_dssp SSCSEEECSTTCTTCCBSSHHHHHHHHHTTC--CSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCCT
T ss_pred CCccEEEeCCCCCCcCcCCHHHHHHhchhcC--CCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeecccc
Confidence 5679999999988 9999999999997532 67899999999999999999999999999999998766654211
Q ss_pred ----------------C-----------------CCCCCccceeEEEEEcCceEEECCceecCCCC----CCCceeeEEE
Q 041181 330 ----------------V-----------------ADGWTTFNSATFSVVAPNFVASSITFRNTAGP----SKGQAAALRS 372 (386)
Q Consensus 330 ----------------~-----------------~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~----~~~qAvAl~v 372 (386)
. ...++|+.||||.|.|++|+++||||+|++|+ .++|||||++
T Consensus 151 ~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v 230 (422)
T 3grh_A 151 GMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT 230 (422)
T ss_dssp TSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE
T ss_pred cccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe
Confidence 0 11357889999999999999999999999996 4799999999
Q ss_pred cCCcEEEEeeEEeC
Q 041181 373 GADFSTFYSCSFEG 386 (386)
Q Consensus 373 ~~d~~~f~~C~~~g 386 (386)
.+|+++||+|+|+|
T Consensus 231 ~gDr~~fy~C~f~G 244 (422)
T 3grh_A 231 DGDQVQINNVNILG 244 (422)
T ss_dssp CCSSEEEEEEEEEC
T ss_pred cCCcEEEEeeEEEe
Confidence 99999999999997
No 4
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=99.97 E-value=2.2e-31 Score=263.59 Aligned_cols=126 Identities=31% Similarity=0.508 Sum_probs=101.8
Q ss_pred eeeeEEEcCC-CCCCcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeEEeCCCCCceEEEecCCceeEEEccCCCC--
Q 041181 255 VTDIITVAQD-GSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVA-- 331 (386)
Q Consensus 255 ~~~~i~V~~~-g~g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~-- 331 (386)
...+++|++| |+|+|+|||+||+++|++ + +|++|+|+||+|+|+|+|+| ++|+|+|+|.++|+|+|+.++.
T Consensus 29 ~~~~~~V~~~~g~g~f~TIq~Ai~aa~~~---~-~~~~I~I~~G~Y~E~v~I~k--~~itl~G~g~~~TiIt~~~~~~~~ 102 (364)
T 3uw0_A 29 AQYNAVVSTTPQGDEFSSINAALKSAPKD---D-TPFIIFLKNGVYTERLEVAR--SHVTLKGENRDGTVIGANTAAGML 102 (364)
T ss_dssp ---------------CCCHHHHHHHSCSS---S-SCEEEEECSEEECCCEEECS--TTEEEEESCTTTEEEEECCCTTSB
T ss_pred cCceEEEcCCCCCCCcccHHHHHhhcccC---C-CcEEEEEeCCEEEEEEEEcC--CeEEEEecCCCCeEEEcccccccc
Confidence 4468999999 999999999999999987 3 68999999999999999974 6999999999999999997542
Q ss_pred ----CCCCccceeEEEEEcCceEEECCceecCCC-----------C---CCCceeeEEE--cCCcEEEEeeEEeC
Q 041181 332 ----DGWTTFNSATFSVVAPNFVASSITFRNTAG-----------P---SKGQAAALRS--GADFSTFYSCSFEG 386 (386)
Q Consensus 332 ----~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g-----------~---~~~qAvAl~v--~~d~~~f~~C~~~g 386 (386)
++++|++++||.|.+++|+++||||+|+++ | ..+|||||++ ++|+++||||+|+|
T Consensus 103 ~~~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G 177 (364)
T 3uw0_A 103 NPQGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG 177 (364)
T ss_dssp CTTCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC
T ss_pred ccccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe
Confidence 347899999999999999999999999985 2 3599999999 59999999999997
No 5
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=99.97 E-value=1.8e-31 Score=262.82 Aligned_cols=125 Identities=34% Similarity=0.483 Sum_probs=113.4
Q ss_pred eeeEEEc--CCCCCCcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeEEeCCCCCceEEEecCCceeEEEccCCC---
Q 041181 256 TDIITVA--QDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSV--- 330 (386)
Q Consensus 256 ~~~i~V~--~~g~g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~--- 330 (386)
..+++|+ +||+|+|+|||+||+++|++ + +|++|+|+||+|+|+|+|+| ++|||+|+|+++|+|+|++..
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~---~-~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~~ 76 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAG---S-TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGTL 76 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSS---S-SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTCB
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccC---C-CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEeccccccc
Confidence 3589999 99999999999999999987 5 89999999999999999975 699999999999999999753
Q ss_pred ---CCCCCccceeEEEEEcCceEEECCceecCC-----------CC---CCCceeeE--EEcCCcEEEEeeEEeC
Q 041181 331 ---ADGWTTFNSATFSVVAPNFVASSITFRNTA-----------GP---SKGQAAAL--RSGADFSTFYSCSFEG 386 (386)
Q Consensus 331 ---~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~-----------g~---~~~qAvAl--~v~~d~~~f~~C~~~g 386 (386)
.++++|+.++||.|.+++|+++||||+|++ ++ .++||||| ++++|+++||||+|+|
T Consensus 77 ~~~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G 151 (342)
T 2nsp_A 77 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG 151 (342)
T ss_dssp CTTSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC
T ss_pred ccccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec
Confidence 234788999999999999999999999999 22 36899999 8899999999999987
No 6
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=99.97 E-value=1.3e-30 Score=227.65 Aligned_cols=147 Identities=18% Similarity=0.167 Sum_probs=133.1
Q ss_pred CcccccCCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHHH
Q 041181 36 VPPETICMYTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSIGAIRALEDCRLLADL 115 (386)
Q Consensus 36 ~~i~~~C~~T~yp~lC~ssL~~~~~s~~~dp~~l~~~al~~t~~~a~~a~~~v~~l~~~~~~~~~~~~~AL~DC~el~~~ 115 (386)
+.|+.+|+.|+||++|+++|.++|.+...||.+|+++++++++.++..+...+..+.+.. .+++.+.||+||.|+|++
T Consensus 4 ~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~ 81 (153)
T 1xg2_B 4 HLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA--TDPKLKGRYETCSENYAD 81 (153)
T ss_dssp HHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHH
Confidence 578999999999999999999988766789999999999999999999999999887543 489999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccchhhHHHHHHHHHhhhhhHHHhhhcccCCccccccccccchhhHHHHHHHHhhhhccc
Q 041181 116 NMDYLSTSYQTANATSQILPAIQADDVQALLSAILTNQQTCFDGLQASANSSESINNGLSVPLLEDIKLSSVLLALFKKG 195 (386)
Q Consensus 116 aid~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~i~~~l~~~~~L~SNaLAiv~~~ 195 (386)
++++|++++.+|.. ..++|++||||+||||++||+|||.+. + .++++|...+.++.+|+||+|||++.+
T Consensus 82 a~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~-~---~~~~~l~~~~~~~~~l~s~aLai~~~l 150 (153)
T 1xg2_B 82 AIDSLGQAKQFLTS-------GDYNSLNIYASAAFDGAGTCEDSFEGP-P---NIPTQLHQADLKLEDLCDIVLVISNLL 150 (153)
T ss_dssp HHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHHHHHCCSS-S---CCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-------CCHHHHHHHHHHHhcccchHHHHhccC-C---CCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999985 358999999999999999999999876 3 356788889999999999999999853
No 7
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.97 E-value=2.2e-30 Score=226.67 Aligned_cols=146 Identities=16% Similarity=0.228 Sum_probs=131.3
Q ss_pred CCcccccCCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHH
Q 041181 35 PVPPETICMYTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSIGAIRALEDCRLLAD 114 (386)
Q Consensus 35 ~~~i~~~C~~T~yp~lC~ssL~~~~~s~~~dp~~l~~~al~~t~~~a~~a~~~v~~l~~~~~~~~~~~~~AL~DC~el~~ 114 (386)
...|+.+|+.|+||++|+++| .|.+...||.+|+++++++++.++..+..++..+.+.. .+++.+.||+||.|+|+
T Consensus 5 ~~~i~~~C~~T~~~~~C~~sL--~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~ 80 (153)
T 1x91_A 5 SSEMSTICDKTLNPSFCLKFL--NTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG--VDPRSKLAYRSCVDEYE 80 (153)
T ss_dssp CCSTTTGGGGSSCHHHHHHHH--HHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCChhHHHHHh--CcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHH
Confidence 468999999999999999999 44455679999999999999999999999999987654 38999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcccchhhHHHHHHHHHhhhhhHHHhhhcccCCccccccccccchhhHHHHHHHHhhhhcc
Q 041181 115 LNMDYLSTSYQTANATSQILPAIQADDVQALLSAILTNQQTCFDGLQASANSSESINNGLSVPLLEDIKLSSVLLALFKK 194 (386)
Q Consensus 115 ~aid~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~i~~~l~~~~~L~SNaLAiv~~ 194 (386)
+++++|++++.+|.. ..++|++||||+||||++||+|||.+. + +++++|...+.++.+|+||+|||++.
T Consensus 81 ~a~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~-~---~~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1x91_A 81 SAIGNLEEAFEHLAS-------GDGMGMNMKVSAALDGADTCLDDVKRL-R---SVDSSVVNNSKTIKNLCGIALVISNM 149 (153)
T ss_dssp HHHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHHHHHHTTC-S---SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHccHhHHHHHhccC-C---CCcCHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999985 359999999999999999999999876 3 35678889999999999999999985
Q ss_pred c
Q 041181 195 G 195 (386)
Q Consensus 195 ~ 195 (386)
+
T Consensus 150 l 150 (153)
T 1x91_A 150 L 150 (153)
T ss_dssp S
T ss_pred c
Confidence 3
No 8
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=99.96 E-value=9.6e-30 Score=222.01 Aligned_cols=144 Identities=16% Similarity=0.157 Sum_probs=130.1
Q ss_pred CCcccccCCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHHH
Q 041181 35 PVPPETICMYTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSIGAIRALEDCRLLAD 114 (386)
Q Consensus 35 ~~~i~~~C~~T~yp~lC~ssL~~~~~s~~~dp~~l~~~al~~t~~~a~~a~~~v~~l~~~~~~~~~~~~~AL~DC~el~~ 114 (386)
...|+.+|+.|+||++|+++|.++|.+..+|+.+|+++++++++.++..+..++..+++.. .+++.+.||+||.|+|+
T Consensus 4 ~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~--~~~~~~~al~dC~e~y~ 81 (150)
T 2cj4_A 4 NNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN--PPAAWKGPLKNCAFSYK 81 (150)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHH
Confidence 4689999999999999999999988777789999999999999999999999999887543 37889999999999999
Q ss_pred HHH-HHHHHHHHHhhccCCCCcccchhhHHHHHHHHHhhhhhHHHhhhcccCCccccccccccchhhHHHHHHHHhhhhc
Q 041181 115 LNM-DYLSTSYQTANATSQILPAIQADDVQALLSAILTNQQTCFDGLQASANSSESINNGLSVPLLEDIKLSSVLLALFK 193 (386)
Q Consensus 115 ~ai-d~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~i~~~l~~~~~L~SNaLAiv~ 193 (386)
+++ ++|++++.++.. ..++|+++|||+|+||++||+|||.+. +++|...+.++.+|+||+|||++
T Consensus 82 ~a~~~~L~~a~~~l~~-------~~~~~~~t~lsaAlt~~~tC~dgf~~~-------~~pl~~~~~~~~~l~s~aLaii~ 147 (150)
T 2cj4_A 82 VILTASLPEAIEALTK-------GDPKFAEDGMVGSSGDAQECEEYFKGS-------KSPFSALNIAVHELSDVGRAIVR 147 (150)
T ss_dssp HHHHTHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHHHHTTTTS-------CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHhhCCC-------CCccHHHHHHHHHHHHHHHHHHH
Confidence 999 799999999985 368999999999999999999999732 34688889999999999999998
Q ss_pred c
Q 041181 194 K 194 (386)
Q Consensus 194 ~ 194 (386)
.
T Consensus 148 ~ 148 (150)
T 2cj4_A 148 N 148 (150)
T ss_dssp T
T ss_pred h
Confidence 5
No 9
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.32 E-value=1e-11 Score=124.63 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=92.0
Q ss_pred eeeeEEEcCCCC----C-----CcccHHHHHhhCCCCCCCCCceEEEEEeCceee--------eeEEeCCCC---CceEE
Q 041181 255 VTDIITVAQDGS----G-----NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--------EYVSIPKNK---INLLM 314 (386)
Q Consensus 255 ~~~~i~V~~~g~----g-----~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~--------E~V~I~~~~---~~i~l 314 (386)
...++.|+++|+ | .| |||+|++.++++ .+|+|++|+|+ |.|.+.+.. .+|+|
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG-------dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti 84 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG-------ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYV 84 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT-------CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEE
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC-------CEEEECCCeEccccccccceeEEecCCCCCCCCEEE
Confidence 456899999864 4 69 999999999988 79999999999 788887542 47999
Q ss_pred EecCCceeEEEccCCCCCCCCccceeEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 315 IGDGINQTIITGNRSVADGWTTFNSATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 315 ~G~g~~~t~I~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
.|++.++++|++.. ..+.....+..|.|.++++++++|+|+|+..+ +|++.+++..|++|.|.+
T Consensus 85 ~~~~g~~~vI~~~~--~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~~------GI~v~gs~~~i~n~~i~~ 148 (400)
T 1ru4_A 85 AAANCGRAVFDFSF--PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQ------GAYVIGSHNTFENTAFHH 148 (400)
T ss_dssp EEGGGCCEEEECCC--CTTCCCTTCCSEEECSSCEEEESEEEESCSSC------SEEECSSSCEEESCEEES
T ss_pred EEecCCCCEEeCCc--cCCccccceeEEEEECCeEEEEeEEEEeCCCC------cEEEeCCCcEEEeEEEEC
Confidence 99988899999332 11111111356888999999999999998653 688989999999999864
No 10
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.09 E-value=2.7e-10 Score=117.20 Aligned_cols=105 Identities=13% Similarity=0.242 Sum_probs=84.4
Q ss_pred eEEEcCCCCCCcccHHHHHhhCCCCCCCCCceEEEEEeCceeee-eEEeCCC---CCceEEEecCCceeEEEccCCCCCC
Q 041181 258 IITVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQE-YVSIPKN---KINLLMIGDGINQTIITGNRSVADG 333 (386)
Q Consensus 258 ~i~V~~~g~g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E-~V~I~~~---~~~i~l~G~g~~~t~I~~~~~~~~g 333 (386)
++.|+ ++.+||+||++|+++ .+|+|++|+|+| .|.|.++ ..+|+|.|++.++++|.|.
T Consensus 25 ~i~V~-----~~~~Lq~Ai~~A~pG-------DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------ 86 (506)
T 1dbg_A 25 GQVVA-----SNETLYQVVKEVKPG-------GLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------ 86 (506)
T ss_dssp -CEEC-----SHHHHHHHHHHCCTT-------CEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------
T ss_pred EEEeC-----CHHHHHHHHHhCCCC-------CEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------
Confidence 35776 468999999999999 899999999998 8888422 3489999997778999875
Q ss_pred CCccceeEEEEEcCceEEECCceecCCCCCC----CceeeEEEcCCcEEEEeeEEeC
Q 041181 334 WTTFNSATFSVVAPNFVASSITFRNTAGPSK----GQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 334 ~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~----~qAvAl~v~~d~~~f~~C~~~g 386 (386)
.+|.|.|++++++||+|+|..+... ....++.+.|+++.|.+|+|.+
T Consensus 87 ------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~ 137 (506)
T 1dbg_A 87 ------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDC 137 (506)
T ss_dssp ------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEES
T ss_pred ------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEc
Confidence 3788999999999999999875321 1124566779999999999975
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.41 E-value=3e-07 Score=91.26 Aligned_cols=94 Identities=17% Similarity=0.162 Sum_probs=63.6
Q ss_pred EEEEEeCceee--eeEEeCCCCCceEEEecCCceeE---EEccCCCCC-----CCC--------ccceeEEEEEc-----
Q 041181 290 FLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTI---ITGNRSVAD-----GWT--------TFNSATFSVVA----- 346 (386)
Q Consensus 290 ~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~---I~~~~~~~~-----g~~--------t~~sat~~v~~----- 346 (386)
.+|+|.||+|+ ++|+|+| ++|+|.|++. .++ |.|+-.... +.+ -...+.|.|.+
T Consensus 58 dvI~L~~G~Y~l~g~ivIdk--p~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r 134 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVDV--SYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPR 134 (410)
T ss_dssp EEEECCSEEEEECSCEEECC--TTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSC
T ss_pred CEEEECCCeeccCCcEEEec--CcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcc
Confidence 89999999997 8999964 6799999874 343 774422100 000 11346666666
Q ss_pred -C-----ceEEECCceecCCCCCCCceeeEEEc--CCcEEEEeeEEeC
Q 041181 347 -P-----NFVASSITFRNTAGPSKGQAAALRSG--ADFSTFYSCSFEG 386 (386)
Q Consensus 347 -~-----~f~~~~lt~~Nt~g~~~~qAvAl~v~--~d~~~f~~C~~~g 386 (386)
+ +|++++++|+|.......+-.++++. +|++.+.+|+|.+
T Consensus 135 ~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~ 182 (410)
T 2inu_A 135 LSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY 182 (410)
T ss_dssp EECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES
T ss_pred cCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec
Confidence 4 55555555555554445677899996 8899999999974
No 12
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.13 E-value=0.00087 Score=65.68 Aligned_cols=52 Identities=25% Similarity=0.368 Sum_probs=41.4
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEeCceeee---------eEEeCCCCCceEEEecCCceeEEEcc
Q 041181 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQE---------YVSIPKNKINLLMIGDGINQTIITGN 327 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E---------~V~I~~~~~~i~l~G~g~~~t~I~~~ 327 (386)
+-..||+||+++... +..+|+|.||+|.. .+.++ .+++|+|+|++.++|...
T Consensus 18 dt~aiq~Ai~~a~~~-----gg~~v~~p~G~y~~~~~~~~~~g~l~~~---~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA-----GGGTVYLPAGEYRVSAAGEPGDGCLMLK---DGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT-----TSEEEEECSEEEEECCCSSGGGCSEECC---TTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc-----CCCEEEECCeEEEEcccccCCcccEEec---CCeEEEEcCCCCcEEEec
Confidence 467899999998752 12799999999996 57774 499999999877877654
No 13
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.76 E-value=0.0046 Score=60.51 Aligned_cols=96 Identities=8% Similarity=0.051 Sum_probs=66.0
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceee--eeEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEEEc
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSVVA 346 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v~~ 346 (386)
-.|+++||....+ +.+|+...|+|+ +.|.|. .++||.|.|. ..+|.|... ......+
T Consensus 55 ~GsLr~av~~~~P-------~~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G~----------gi~i~~a 113 (346)
T 1pxz_A 55 PGTLRYGATREKA-------LWIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGGP----------CLFMRKV 113 (346)
T ss_dssp TTSHHHHHHCSSC-------EEEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTSC----------CEEEESC
T ss_pred cchhHHHhccCCC-------eEEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCcc----------eEEEEcc
Confidence 3489999987443 377777889997 678885 3999999984 567777321 1112357
Q ss_pred CceEEECCceecCCCCC----------------CCceeeEEE-cCCcEEEEeeEEe
Q 041181 347 PNFVASSITFRNTAGPS----------------KGQAAALRS-GADFSTFYSCSFE 385 (386)
Q Consensus 347 ~~f~~~~lt~~Nt~g~~----------------~~qAvAl~v-~~d~~~f~~C~~~ 385 (386)
++++++||+|++..... ....-||.+ .+.++.+.+|.|.
T Consensus 114 ~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s 169 (346)
T 1pxz_A 114 SHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLS 169 (346)
T ss_dssp EEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEE
T ss_pred CCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEe
Confidence 99999999999863110 112234555 5788889999885
No 14
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.21 E-value=0.015 Score=57.21 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=40.6
Q ss_pred ceEEEecCCceeEEEccCCCCCCCCccceeEEEE--EcCceEEECCceecCCCC--CCCceeeEEEcCCcEEEEeeEEe
Q 041181 311 NLLMIGDGINQTIITGNRSVADGWTTFNSATFSV--VAPNFVASSITFRNTAGP--SKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 311 ~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
|+||+|.|. ..+|.|. -|.+ .++++++|||+|++.... ..+.|+-+. .++++.+.+|.|.
T Consensus 109 nkTI~G~g~-~~~I~G~-------------gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s 172 (359)
T 1qcx_A 109 NKSIVGQGT-KGVIKGK-------------GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTA 172 (359)
T ss_dssp SEEEEECTT-CCEEESC-------------CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEE
T ss_pred CceEEecCC-ceEEecc-------------eEEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEee
Confidence 677777663 3444442 2667 579999999999986421 123445444 6888999999885
No 15
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=96.19 E-value=0.023 Score=60.48 Aligned_cols=107 Identities=14% Similarity=0.198 Sum_probs=67.2
Q ss_pred cccHHHHHhhCCCCC----CCCCceEEEEEeCceee--eeEEeCCCCCceEEEecCCceeEEEccCCCCC-----C--CC
Q 041181 269 FSTITDAINFAPNNT----NVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNRSVAD-----G--WT 335 (386)
Q Consensus 269 f~TIq~Av~aap~~~----~~~~~~~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~-----g--~~ 335 (386)
=.-||+||+++.... .....+.+|||.+|+|. ..|.++ .++.|+|++.+.++|....++.+ + +.
T Consensus 66 T~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~~~~pvIka~~~F~G~~li~~d~y~ 142 (758)
T 3eqn_A 66 TAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL---YQTQLIGDAKNLPTLLAAPNFSGIALIDADPYL 142 (758)
T ss_dssp HHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECC---TTEEEEECSSSCCEEEECTTCCSSCSEESSCBC
T ss_pred HHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEcc---CCeEEEecCCCCCeEecCCCCCCcceeeccccC
Confidence 456999999885531 00234579999999998 578885 49999999988788876554321 0 00
Q ss_pred ----cc--ceeEEEEEcCceEEECCceecCCCCCCCceeeEEE-cCCcEEEEeeEEe
Q 041181 336 ----TF--NSATFSVVAPNFVASSITFRNTAGPSKGQAAALRS-GADFSTFYSCSFE 385 (386)
Q Consensus 336 ----t~--~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~C~~~ 385 (386)
.+ .... -...++||.|..+..+.. +.+|+. .+....+.||.|.
T Consensus 143 ~~G~~w~~~~~~-----F~r~irNlviD~t~~~~~--~~gIhw~vaQatsL~Nv~i~ 192 (758)
T 3eqn_A 143 AGGAQYYVNQNN-----FFRSVRNFVIDLRQVSGS--ATGIHWQVSQATSLINIVFQ 192 (758)
T ss_dssp GGGCBSSCGGGC-----CCEEEEEEEEECTTCSSC--EEEEECCCCSSEEEEEEEEE
T ss_pred CCCccccccccc-----eeeeecceEEeccccCCC--ceEEEEEecCceEEEEEEEE
Confidence 00 0111 133566767766655432 666665 5666677777664
No 16
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=95.73 E-value=0.029 Score=55.10 Aligned_cols=66 Identities=20% Similarity=0.283 Sum_probs=44.0
Q ss_pred eEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEE--EcCceEEECCceecCCCC--CCCceeeEEEcCCcE
Q 041181 302 YVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSV--VAPNFVASSITFRNTAGP--SKGQAAALRSGADFS 377 (386)
Q Consensus 302 ~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~v~~d~~ 377 (386)
.|.|+ .|+||+|.|. ..+|.|.. |.+ .++++++|||+|++.... .++.|+-+. .++++
T Consensus 103 ~l~v~---snkTI~G~G~-~~~i~G~g-------------l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nV 164 (359)
T 1idk_A 103 GITVT---SNKSLIGEGS-SGAIKGKG-------------LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLV 164 (359)
T ss_dssp CEEEC---SSEEEEECTT-TCEEESCC-------------EEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEE
T ss_pred eEEeC---CCceEEEecC-CeEEecce-------------EEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcE
Confidence 46664 4899999874 35555532 566 479999999999984211 123344333 67888
Q ss_pred EEEeeEEe
Q 041181 378 TFYSCSFE 385 (386)
Q Consensus 378 ~f~~C~~~ 385 (386)
.+.+|.|.
T Consensus 165 wIDHcs~s 172 (359)
T 1idk_A 165 WIDHVTTA 172 (359)
T ss_dssp EEESCEEE
T ss_pred EEEeeEee
Confidence 88888885
No 17
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=95.22 E-value=0.13 Score=50.38 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=45.1
Q ss_pred eEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEE-EcCceEEECCceecCCC--C----C---CCceeeEE
Q 041181 302 YVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSV-VAPNFVASSITFRNTAG--P----S---KGQAAALR 371 (386)
Q Consensus 302 ~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~----~---~~qAvAl~ 371 (386)
+|.|. .|+||+|.|. ...|.|. -|.+ .++++++|||+|++... | . +...=||.
T Consensus 75 ~l~v~---sn~TI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~ 137 (355)
T 1pcl_A 75 QISIP---SNTTIIGVGS-NGKFTNG-------------SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAV 137 (355)
T ss_pred eEEeC---CCeEEEEecC-CeEEecC-------------EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEE
Confidence 55563 5999999874 4556552 2344 47999999999998532 1 0 01223455
Q ss_pred E-cCCcEEEEeeEEe
Q 041181 372 S-GADFSTFYSCSFE 385 (386)
Q Consensus 372 v-~~d~~~f~~C~~~ 385 (386)
+ .+.++.+.+|.|.
T Consensus 138 i~~s~nVWIDH~s~s 152 (355)
T 1pcl_A 138 IDNSTNVWVDHVTIS 152 (355)
T ss_pred ecCCCcEEEEeeEEe
Confidence 5 6899999999985
No 18
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=95.10 E-value=0.11 Score=51.11 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=33.2
Q ss_pred eEEEcCCCC-CCcccHHHHHhhCCCCCCCCCceEEEEEeC--ceee-eeEEeCCCCCceEEEecC
Q 041181 258 IITVAQDGS-GNFSTITDAINFAPNNTNVSNGYFLIYITA--GVYQ-EYVSIPKNKINLLMIGDG 318 (386)
Q Consensus 258 ~i~V~~~g~-g~f~TIq~Av~aap~~~~~~~~~~~I~I~~--G~Y~-E~V~I~~~~~~i~l~G~g 318 (386)
+..|-..|. -+=..||+||++++.+. .++++.+ |+|. ..|.++ .+++|..++
T Consensus 14 ~~~v~~~G~~~dT~aiq~Ai~ac~~Gg------~v~~~~~~~g~yl~g~i~l~---s~vtL~l~~ 69 (376)
T 1bhe_A 14 SCTTLKADSSTATSTIQKALNNCDQGK------AVRLSAGSTSVFLSGPLSLP---SGVSLLIDK 69 (376)
T ss_dssp EEEEEECCSSBCHHHHHHHHTTCCTTC------EEEEECSSSSEEEESCEECC---TTCEEEECT
T ss_pred eEEECCCCCCccHHHHHHHHHHhccCC------cEEEECCCCceEEEeEEEEC---CCCEEEECC
Confidence 455555553 23445999999987652 3444443 8997 688885 367776665
No 19
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=95.03 E-value=0.036 Score=53.85 Aligned_cols=84 Identities=13% Similarity=0.020 Sum_probs=47.8
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeE-EeCCCCCceEEEecCC-----------------ceeEEEccC-C
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V-~I~~~~~~i~l~G~g~-----------------~~t~I~~~~-~ 329 (386)
...||+|++++... ..-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----~g~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~gG 78 (339)
T 2iq7_A 8 AAAAIKGKASCTSI-----ILNGIVVPAGTTLD-MTGL---KSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASGH 78 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCCC
Confidence 45799999998752 22578899999873 2 22 23455554431 234455531 1
Q ss_pred CCCCCC------------ccceeEEEE-EcCceEEECCceecCCC
Q 041181 330 VADGWT------------TFNSATFSV-VAPNFVASSITFRNTAG 361 (386)
Q Consensus 330 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g 361 (386)
..||.+ ..+...|.+ ..+++.++||+|+|+..
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~ 123 (339)
T 2iq7_A 79 SIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV 123 (339)
T ss_dssp EEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS
T ss_pred EEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc
Confidence 112211 111223444 57899999999999854
No 20
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=95.01 E-value=0.073 Score=51.92 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=56.2
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeE-EeCCCCCceEEEecCC------------------ceeEEEcc-
Q 041181 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI------------------NQTIITGN- 327 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V-~I~~~~~~i~l~G~g~------------------~~t~I~~~- 327 (386)
++..||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. ..+.|+|.
T Consensus 7 ~t~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~~g~~i~~~~~ni~I~G~~ 77 (349)
T 1hg8_A 7 EYSGLATAVSSCKNI-----VLNGFQVPTGKQLD-LSSL---QNDSTVTFKGTTTFATTADNDFNPIVISGSNITITGAS 77 (349)
T ss_dssp SGGGHHHHHHHCSEE-----EECCCEECTTCCEE-ETTC---CTTCEEEECSEEEECCCCCTTCCSEEEEEESCEEEECT
T ss_pred CHHHHHHHHHhcccc-----CCCEEEECCCEEEE-eecc---CCCeEEEEcCceecccccccCCceEEEECccEEEEecC
Confidence 356799999998752 12578888898864 2 11 12444444331 22444442
Q ss_pred CCCCCCCC------------c-cceeEEEE-E--cCceEEECCceecCCCCCCCceeeEEE-cCCcEEEEeeEEe
Q 041181 328 RSVADGWT------------T-FNSATFSV-V--APNFVASSITFRNTAGPSKGQAAALRS-GADFSTFYSCSFE 385 (386)
Q Consensus 328 ~~~~~g~~------------t-~~sat~~v-~--~~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~C~~~ 385 (386)
....||-+ . .+.-.|.+ . .+++.++||+|+|+.. -.+.+ ..+++.+.++.+.
T Consensus 78 ~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~------~~i~i~~~~nv~i~~~~I~ 146 (349)
T 1hg8_A 78 GHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV------HCFDITGSSQLTISGLILD 146 (349)
T ss_dssp TCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS------EEEEEESCEEEEEEEEEEE
T ss_pred CCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC------ceEEEeccCCEEEEEEEEE
Confidence 11112211 1 12225666 5 4589999999999853 22333 4555566665553
No 21
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=94.73 E-value=0.12 Score=50.28 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=53.3
Q ss_pred eEEEEEeCceee----eeEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEE-EcCceEEECCceecCCC--
Q 041181 289 YFLIYITAGVYQ----EYVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSV-VAPNFVASSITFRNTAG-- 361 (386)
Q Consensus 289 ~~~I~I~~G~Y~----E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g-- 361 (386)
+.+|.| .|++. +.|.|. +|+||+|.|.. .|.|.. +.+ .++++++|||+|++...
T Consensus 47 PriIvv-~G~I~~~~~~~l~v~---snkTI~G~ga~--~I~G~G-------------i~I~~a~NVIIrnl~i~~~~~~~ 107 (340)
T 3zsc_A 47 KYVIVV-DGTIVFEPKREIKVL---SDKTIVGINDA--KIVGGG-------------LVIKDAQNVIIRNIHFEGFYMED 107 (340)
T ss_dssp CEEEEE-EEEEEEEEEEEEEEC---SSEEEEEEEEE--EEEEEE-------------EEEESCEEEEEESCEEECCCCTT
T ss_pred CEEEEE-CcEEEeCCcceEEec---CCCEEEeccCc--EEecCc-------------eEEEcCceEEEeCeEEECCcccc
Confidence 456655 68877 467774 59999999965 676532 334 47999999999998641
Q ss_pred -C----CCCceeeEEEcCCcEEEEeeEEe
Q 041181 362 -P----SKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 362 -~----~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
+ ....|+-+. .++++.+.+|.|.
T Consensus 108 ~~~~~~~~~DaI~i~-~s~nVWIDHcs~s 135 (340)
T 3zsc_A 108 DPRGKKYDFDYINVE-NSHHIWIDHITFV 135 (340)
T ss_dssp CTTSCSSCCCSEEEE-SCEEEEEESCEEE
T ss_pred CccCCcCCCCeEEEe-cCCcEEEEeeeec
Confidence 1 124444443 5788999999885
No 22
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=94.65 E-value=0.17 Score=50.25 Aligned_cols=63 Identities=21% Similarity=0.472 Sum_probs=43.6
Q ss_pred CCceEEEecCCceeEEEccCCCCCCCCccceeEEEEEcCceEEECCceecCCC--C----C-------CCceeeEEE-cC
Q 041181 309 KINLLMIGDGINQTIITGNRSVADGWTTFNSATFSVVAPNFVASSITFRNTAG--P----S-------KGQAAALRS-GA 374 (386)
Q Consensus 309 ~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g--~----~-------~~qAvAl~v-~~ 374 (386)
.+|+||+|.|. ...|.| ..|.+.++++++|||+|++... | . ....=||.+ .+
T Consensus 126 ~snkTI~G~G~-~~~i~g-------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s 191 (399)
T 2o04_A 126 PANTTIVGSGT-NAKVVG-------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGG 191 (399)
T ss_dssp CSSEEEEESSS-CCEEES-------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESC
T ss_pred CCCceEEeccC-CeEEee-------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEecCC
Confidence 35999999975 445554 2366777999999999998531 0 0 011234554 78
Q ss_pred CcEEEEeeEEe
Q 041181 375 DFSTFYSCSFE 385 (386)
Q Consensus 375 d~~~f~~C~~~ 385 (386)
.++.+.+|.|.
T Consensus 192 ~nVWIDHcs~s 202 (399)
T 2o04_A 192 THIWIDHCTFN 202 (399)
T ss_dssp EEEEEESCEEE
T ss_pred CcEEEEeeeee
Confidence 89999999985
No 23
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=94.62 E-value=0.13 Score=50.21 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=59.5
Q ss_pred CcccHHHHHhhCCCCCC-----CCCceEEEEEeCcee------------------eeeEEeCCCCCceEEEecCCceeEE
Q 041181 268 NFSTITDAINFAPNNTN-----VSNGYFLIYITAGVY------------------QEYVSIPKNKINLLMIGDGINQTII 324 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~-----~~~~~~~I~I~~G~Y------------------~E~V~I~~~~~~i~l~G~g~~~t~I 324 (386)
...++++||+++..+.. ....+.+|+| .|+. ...+.|.....|+||+|.+. . |
T Consensus 25 t~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~--~-~ 100 (353)
T 1air_A 25 SMQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG--S-S 100 (353)
T ss_dssp SHHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTT--C-C
T ss_pred CHHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccC--C-C
Confidence 35688899988652210 1345677777 4542 14566643245788887631 1 1
Q ss_pred EccCCCCCCCCccceeEEEE-EcCceEEECCceecCCCC-CCCceeeEEEcCCcEEEEeeEEe
Q 041181 325 TGNRSVADGWTTFNSATFSV-VAPNFVASSITFRNTAGP-SKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 325 ~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~-~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
. |. .|.+ .++++++|||+|++..+. ...-|+-+. .++++.+.+|.|.
T Consensus 101 ~-------g~------gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s 149 (353)
T 1air_A 101 A-------NF------GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELF 149 (353)
T ss_dssp B-------SS------EEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEE
T ss_pred C-------Cc------eEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEe
Confidence 1 11 2444 469999999999964321 123344343 6789999999885
No 24
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=94.60 E-value=0.16 Score=49.75 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=53.9
Q ss_pred CceEEEEEeCceee----------------eeEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEE----Ec
Q 041181 287 NGYFLIYITAGVYQ----------------EYVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSV----VA 346 (386)
Q Consensus 287 ~~~~~I~I~~G~Y~----------------E~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v----~~ 346 (386)
..+.+|+| .|+.. .+|.|. .|+||+|.|. ...|.|. -|.+ .+
T Consensus 52 ~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v~---snkTI~G~G~-~~~i~g~-------------gl~i~~~~~~ 113 (361)
T 1pe9_A 52 AEAKIIQI-KGTIDISGGTPYTDFADQKARSQINIP---ANTTVIGLGT-DAKFING-------------SLIIDGTDGT 113 (361)
T ss_dssp TSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEECC---SSEEEEECTT-CCEEESS-------------EEEEEGGGTC
T ss_pred CCcEEEEE-CCEEecCCccccccccccccceeEEec---CCcEEEccCC-CeEEecC-------------EEEEecCCCC
Confidence 34577866 56664 256663 5999999975 4555542 3566 46
Q ss_pred CceEEECCceecCCC--C----CC---CceeeEEEc--CCcEEEEeeEEe
Q 041181 347 PNFVASSITFRNTAG--P----SK---GQAAALRSG--ADFSTFYSCSFE 385 (386)
Q Consensus 347 ~~f~~~~lt~~Nt~g--~----~~---~qAvAl~v~--~d~~~f~~C~~~ 385 (386)
+++++|||+|++... | .. ...=||.+. +.++.+.+|.|.
T Consensus 114 ~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s 163 (361)
T 1pe9_A 114 NNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTIS 163 (361)
T ss_dssp EEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEE
T ss_pred ceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEee
Confidence 899999999998642 1 00 122356663 689999999985
No 25
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=94.40 E-value=0.085 Score=51.15 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=56.8
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEeCceeee-----------------eEEeCCCCCceEEEecCCceeEEEccCCCCC
Q 041181 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQE-----------------YVSIPKNKINLLMIGDGINQTIITGNRSVAD 332 (386)
Q Consensus 270 ~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E-----------------~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~ 332 (386)
..+++||+..+.. ++.+|.+ .|++.= +|.| .+|+||+|.+. .|.|
T Consensus 24 ~~L~~al~~~~~~-----~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v---~sn~TI~G~~a---~i~g------ 85 (330)
T 2qy1_A 24 EAMQSAIDSYSGS-----GGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN---KSDVTIKGANG---SAAN------ 85 (330)
T ss_dssp HHHHHHHHHSCSS-----SCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES---CCSEEEEECTT---CBBS------
T ss_pred HHHHHHHhccCCC-----CCEEEEE-ccEEecccccccccccccccceeEEEc---CCCeEEECCCc---EEee------
Confidence 3678888865432 3466666 677652 3333 35777777542 2222
Q ss_pred CCCccceeEEEEE--cCceEEECCceecCCCCCCCceeeEEE----cCCcEEEEeeEEe
Q 041181 333 GWTTFNSATFSVV--APNFVASSITFRNTAGPSKGQAAALRS----GADFSTFYSCSFE 385 (386)
Q Consensus 333 g~~t~~sat~~v~--~~~f~~~~lt~~Nt~g~~~~qAvAl~v----~~d~~~f~~C~~~ 385 (386)
.-|.+. ++++++|||+|++-....++.|+-+.- .++++.+.+|.|.
T Consensus 86 -------~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s 137 (330)
T 2qy1_A 86 -------FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVF 137 (330)
T ss_dssp -------SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEE
T ss_pred -------eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEE
Confidence 235665 699999999999754211234444443 4889999999983
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=94.32 E-value=0.06 Score=52.23 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=56.5
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeE-EeCCCCCceEEEecCC-----------------ceeEEEccC-C
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V-~I~~~~~~i~l~G~g~-----------------~~t~I~~~~-~ 329 (386)
+..||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----gg~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 78 (336)
T 1nhc_A 8 ASEASESISSCSDV-----VLSSIEVPAGETLD-LSDA---ADGSTITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGA 78 (336)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-CTTC---CTTCEEEEESEEEECCCCSCCCSEECCEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeceEEcccccccCcEEEEecCCEEEEcCCCe
Confidence 45688888888652 22577888888862 2 22 23455554430 234445531 1
Q ss_pred CCCCCC------------ccceeEEEE-EcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEe
Q 041181 330 VADGWT------------TFNSATFSV-VAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 330 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
..||.+ ..+-..|.+ ..+++.++||+|+|+.. ..+-+. .+++.+.+|.+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~--~~nv~i~~~~I~ 141 (336)
T 1nhc_A 79 VIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ--ATNVHLNDFTID 141 (336)
T ss_dssp EEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE--EEEEEEESCEEE
T ss_pred EEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE--eCCEEEEEEEEE
Confidence 112211 111223444 57889999999999854 223333 666777777664
No 27
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=94.10 E-value=0.098 Score=50.78 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=48.3
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeE-EeCCCCCceEEEecCC-----------------ceeEEEccC-C
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V-~I~~~~~~i~l~G~g~-----------------~~t~I~~~~-~ 329 (386)
+..||+|++++... ..-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 12 ~~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 82 (339)
T 1ia5_A 12 ASSASKSKTSCSTI-----VLSNVAVPSGTTLD-LTKL---NDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASGH 82 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred hHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCCe
Confidence 56799999998752 22678899999873 3 22 23555555441 223444431 1
Q ss_pred CCCCCC------------ccceeEEEE-EcCceEEECCceecCCC
Q 041181 330 VADGWT------------TFNSATFSV-VAPNFVASSITFRNTAG 361 (386)
Q Consensus 330 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g 361 (386)
..||.+ ..+...|.+ ..+++.++||+|+|+..
T Consensus 83 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~ 127 (339)
T 1ia5_A 83 SINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV 127 (339)
T ss_dssp EEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS
T ss_pred EEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc
Confidence 112211 111223444 57889999999999853
No 28
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=93.78 E-value=0.26 Score=47.64 Aligned_cols=95 Identities=17% Similarity=0.270 Sum_probs=60.2
Q ss_pred cHHHHHhh---CCCCCCCCCceEEEEEeCceee------eeEEeCC------CCCceEEEecCCceeEEEccCCCCCCCC
Q 041181 271 TITDAINF---APNNTNVSNGYFLIYITAGVYQ------EYVSIPK------NKINLLMIGDGINQTIITGNRSVADGWT 335 (386)
Q Consensus 271 TIq~Av~a---ap~~~~~~~~~~~I~I~~G~Y~------E~V~I~~------~~~~i~l~G~g~~~t~I~~~~~~~~g~~ 335 (386)
-+++||.. ... .+++.+|+| .|+-. +.|.|.. ..+|+||+|.|. ..+|.|..
T Consensus 30 dL~~Al~~~~~~~~----~~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~-~~~i~G~g------- 96 (326)
T 3vmv_A 30 QIQQLIDNRSRSNN----PDEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGT-NGEFDGIG------- 96 (326)
T ss_dssp HHHHHHHHHHHSSC----TTSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTT-CCEEESCC-------
T ss_pred HHHHHHhhcccccC----CCCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCC-CeEEeCcE-------
Confidence 37888873 111 134467764 46654 4677741 126999999885 34555431
Q ss_pred ccceeEEEE-EcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEe
Q 041181 336 TFNSATFSV-VAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 336 t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
|.+ .++++++|||+|++.... ...|+-+.-.++++.+.+|.|.
T Consensus 97 ------l~i~~a~NVIIrNl~i~~~~~~-~~DaI~i~~~s~nVWIDH~s~s 140 (326)
T 3vmv_A 97 ------IRLSNAHNIIIQNVSIHHVREG-EGTAIEVTDDSKNVWIDHNEFY 140 (326)
T ss_dssp ------EEEESEEEEEEESCEEECCCST-TSCSEEEETTCEEEEEESCEEE
T ss_pred ------EEEEecceEEEECeEEEcCCCC-CCCeEEEecCCCcEEEEeeEEe
Confidence 344 679999999999987532 2444444323689999999984
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=93.43 E-value=0.15 Score=50.91 Aligned_cols=42 Identities=26% Similarity=0.309 Sum_probs=30.5
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceeee--eEEeCCCCCceEEEecC
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQE--YVSIPKNKINLLMIGDG 318 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E--~V~I~~~~~~i~l~G~g 318 (386)
=.-||+|++++..+ -+|+|.+|+|.= .|.+.. ..+++|..+|
T Consensus 37 T~Aiq~Ai~ac~~g-------~~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G 80 (422)
T 1rmg_A 37 GPAITSAWAACKSG-------GLVYIPSGNYALNTWVTLTG-GSATAIQLDG 80 (422)
T ss_dssp HHHHHHHHHHHTBT-------CEEEECSSEEEECSCEEEES-CEEEEEEECS
T ss_pred HHHHHHHHHHCCCC-------CEEEECCCeEEeCCceeecC-CCeEEEEEcC
Confidence 45699999988644 589999999983 377742 2467777665
No 30
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=93.34 E-value=0.34 Score=49.11 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=28.5
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEeCceee-eeEEeCCCCCceEEEec
Q 041181 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ-EYVSIPKNKINLLMIGD 317 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~-E~V~I~~~~~~i~l~G~ 317 (386)
+=.-||+|++++... .+.-+|+|.+|+|. ..|.++ .+++|..+
T Consensus 38 dT~Aiq~Aidac~~~----~ggg~V~vP~GtYl~g~I~lk---s~v~L~l~ 81 (464)
T 1h80_A 38 DSNALQRAINAISRK----PNGGTLLIPNGTYHFLGIQMK---SNVHIRVE 81 (464)
T ss_dssp CHHHHHHHHHHHHTS----TTCEEEEECSSEEEECSEECC---TTEEEEEC
T ss_pred hHHHHHHHHHHHhhc----cCCcEEEECCCeEEEeeEecc---CceEEEEc
Confidence 456799999987321 01278999999996 455553 35666554
No 31
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=93.19 E-value=0.2 Score=49.04 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=58.0
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceeeeeE-EeCCCCCceEEEecCC-----------------ceeEEEcc-CC
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGN-RS 329 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~E~V-~I~~~~~~i~l~G~g~-----------------~~t~I~~~-~~ 329 (386)
+..||+|++++... ..-+|+|.+|+|.. + .+ +.+++|..+|. +.+.|+|. ..
T Consensus 35 ~~aiq~ai~~c~~~-----~g~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~~g 105 (362)
T 1czf_A 35 AAAAKAGKAKCSTI-----TLNNIEVPAGTTLD-LTGL---TSGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASGH 105 (362)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCEEEECCCEEEE-eecc---CCCeEEEEeCcEEeccccCCCcEEEEeCccEEEEcCCCc
Confidence 56899999998642 23578999999873 3 22 22455554441 23455552 11
Q ss_pred CCCCCC-cc----------ce-eEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEe
Q 041181 330 VADGWT-TF----------NS-ATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFE 385 (386)
Q Consensus 330 ~~~g~~-t~----------~s-at~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~ 385 (386)
..||.+ .| +- .......+++.++||+|+|+.. ..+-+. .+++.+.+|.+.
T Consensus 106 ~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~--~~nv~i~~~~I~ 167 (362)
T 1czf_A 106 LINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ--ANDITFTDVTIN 167 (362)
T ss_dssp EEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE--CSSEEEESCEEE
T ss_pred EEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe--eCCEEEEEEEEE
Confidence 112211 01 11 2233446889999999998843 223333 677777777664
No 32
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=91.95 E-value=0.82 Score=45.60 Aligned_cols=67 Identities=21% Similarity=0.334 Sum_probs=44.8
Q ss_pred eEEeCCCCCceEEEecCCceeEEEccCCCCCCCCccceeEEEE-EcCceEEECCceecCCC--C----C-------CCce
Q 041181 302 YVSIPKNKINLLMIGDGINQTIITGNRSVADGWTTFNSATFSV-VAPNFVASSITFRNTAG--P----S-------KGQA 367 (386)
Q Consensus 302 ~V~I~~~~~~i~l~G~g~~~t~I~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~----~-------~~qA 367 (386)
+|.| ..|+||+|.|. ...|.|. -|.+ .+++++++||+|++... | . ....
T Consensus 127 ~i~v---~snkTI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~ 189 (416)
T 1vbl_A 127 MVYV---GSNTSIIGVGK-DAKIKGG-------------GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEY 189 (416)
T ss_dssp EEEC---CSSEEEEECTT-CCEEESC-------------EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCC
T ss_pred EEEe---CCCeeEEecCC-CeEEecC-------------EEEeecCceEEEeCeEEEcCccccccccccccccccccCCC
Confidence 4455 35999999985 4555542 2455 46999999999998532 1 0 0122
Q ss_pred eeEEE-cCCcEEEEeeEEe
Q 041181 368 AALRS-GADFSTFYSCSFE 385 (386)
Q Consensus 368 vAl~v-~~d~~~f~~C~~~ 385 (386)
=||.+ .+.++.+.+|.|.
T Consensus 190 DaI~i~~s~nVWIDHcs~s 208 (416)
T 1vbl_A 190 DSISIEGSSHIWIDHNTFT 208 (416)
T ss_dssp CSEEEESCEEEEEESCEEE
T ss_pred ceEEecCCceEEEEccEEe
Confidence 34555 7899999999985
No 33
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=91.24 E-value=0.83 Score=47.73 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=28.8
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEeCceee-eeEEeCCCCCceEEEe
Q 041181 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ-EYVSIPKNKINLLMIG 316 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~-E~V~I~~~~~~i~l~G 316 (386)
+=.-||+||+++..+ -+|+|.+|+|. ..|.+. .+++|..
T Consensus 172 dt~aiq~Ai~~c~~g-------~~v~vP~G~y~~g~i~lk---s~v~L~l 211 (608)
T 2uvf_A 172 NTKAIQQAIDSCKPG-------CRVEIPAGTYKSGALWLK---SDMTLNL 211 (608)
T ss_dssp CHHHHHHHHHTCCTT-------EEEEECSEEEEECCEECC---SSEEEEE
T ss_pred CHHHHHHHHHhcCCC-------CEEEECCCceEecceecc---CceEEEe
Confidence 345699999988764 78999999997 466663 3566554
No 34
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=90.87 E-value=1.4 Score=47.02 Aligned_cols=102 Identities=18% Similarity=0.265 Sum_probs=67.0
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEeCceee--eeEEeCCCCCceEEEecCCceeEEEccCC-CCCCCCccceeEEEE
Q 041181 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNRS-VADGWTTFNSATFSV 344 (386)
Q Consensus 268 ~f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~I~~~~~-~~~g~~t~~sat~~v 344 (386)
+=..||+|++++..+ .+||+.+|+|+ ..|.||. ++.|+|++- .+|.+... +.|.. .--+.|.|
T Consensus 416 DT~Ai~~al~aa~~g-------~~v~~P~G~Y~vt~Ti~ip~---~~~ivG~~~--~~I~~~G~~F~d~~--~P~pvv~V 481 (758)
T 3eqn_A 416 DTQAIKNVFAKYAGC-------KIIFFDAGTYIVTDTIQIPA---GTQIVGEVW--SVIMGTGSKFTDYN--NPQPVIQV 481 (758)
T ss_dssp CHHHHHHHHHHHTTT-------SEEECCSEEEEESSCEEECT---TCEEECCSS--EEEEECSGGGCCTT--SCEEEEEE
T ss_pred hHHHHHHHHHHhcCC-------CEEEECCCEeEECCeEEcCC---CCEEEeccc--ceEecCCccccCCC--CCeeeEEe
Confidence 457799999977554 69999999999 6899974 899999985 45554432 22211 12356666
Q ss_pred E----cCceEEECCceecCCCCCCCceeeEEEc-------CCcEEEEeeEEe
Q 041181 345 V----APNFVASSITFRNTAGPSKGQAAALRSG-------ADFSTFYSCSFE 385 (386)
Q Consensus 345 ~----~~~f~~~~lt~~Nt~g~~~~qAvAl~v~-------~d~~~f~~C~~~ 385 (386)
. ...+.+.||.|. +.|+. .-|+.|.+. .+.+.+.++.|.
T Consensus 482 G~~gd~G~veisdl~~~-t~g~~-~gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 482 GAPGSSGVVEITDMIFT-TRGPA-AGAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp SCTTCBSCEEEESCEEE-ECSCC-TTEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred CCCCCCCeEEEEeEEEE-ecCCC-CCcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 2 358999999996 34443 234556552 134666666554
No 35
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=89.75 E-value=0.5 Score=49.28 Aligned_cols=46 Identities=22% Similarity=0.448 Sum_probs=35.1
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceee--eeEEeCCCCCceEEEecCCceeEEEcc
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGN 327 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~I~~~ 327 (386)
=.-||+|+++. -+|+|.+|+|. ..|.++ .+++|.|++...++|.+.
T Consensus 39 T~Aiq~Ai~~G----------g~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~ 86 (609)
T 3gq8_A 39 IRAFEKAIESG----------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFM 86 (609)
T ss_dssp HHHHHHHHHTS----------SCEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEEC
T ss_pred HHHHHHHHHcC----------CEEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeC
Confidence 34699999962 37999999998 468885 489999998666666643
No 36
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=89.05 E-value=0.95 Score=45.56 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=28.1
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEeCceee-eeEEeCCCCCceEEEecC
Q 041181 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQ-EYVSIPKNKINLLMIGDG 318 (386)
Q Consensus 270 ~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~-E~V~I~~~~~~i~l~G~g 318 (386)
.-||+|++++... +.-+|+|.+|+|. ..|.+ +.+++|..+|
T Consensus 45 ~Aiq~Ai~~c~~~-----ggg~v~vP~G~yl~~~l~l---~s~v~l~l~g 86 (448)
T 3jur_A 45 ESFKRAIEELSKQ-----GGGRLIVPEGVFLTGPIHL---KSNIELHVKG 86 (448)
T ss_dssp HHHHHHHHHHHHH-----TCEEEEECSSEEEESCEEC---CTTEEEEESS
T ss_pred HHHHHHHHhhhhc-----CCeEEEECCCcEEEeeeEe---CCCcEEEEEE
Confidence 4699999987642 1268999999997 35555 2466666653
No 37
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=84.09 E-value=0.0056 Score=61.63 Aligned_cols=93 Identities=16% Similarity=-0.021 Sum_probs=71.4
Q ss_pred eEEEcCCCCCCcccHHHHHhhCCCCCCCCCceE------EEEEeCceeeeeEEeCCCCCceEEEecCC---ceeEEEccC
Q 041181 258 IITVAQDGSGNFSTITDAINFAPNNTNVSNGYF------LIYITAGVYQEYVSIPKNKINLLMIGDGI---NQTIITGNR 328 (386)
Q Consensus 258 ~i~V~~~g~g~f~TIq~Av~aap~~~~~~~~~~------~I~I~~G~Y~E~V~I~~~~~~i~l~G~g~---~~t~I~~~~ 328 (386)
.-.|+.+..|.+ +|+|.+.++-. .+.+. .+-|++|+|+|.|.|+.+++++++.|-+. +.|.|+++.
T Consensus 293 ~~~~~~~~~g~~--~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (432)
T 1vcl_A 293 WNMVGCDQNGKV--SQQISNTISFS---STVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTC 367 (432)
T ss_dssp EEEEEEETTSCC--EEEECCEEECS---SCCCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEEC
T ss_pred ccccccCCCCcE--EEeccceEEEe---ccccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEec
Confidence 344555556766 58888877765 23333 78899999999999999999999998764 348999987
Q ss_pred CCCCCCCccceeEEEEEcCceEEECCceecCCC
Q 041181 329 SVADGWTTFNSATFSVVAPNFVASSITFRNTAG 361 (386)
Q Consensus 329 ~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g 361 (386)
.+ +.++++++.|-.|++++-|-|--++
T Consensus 368 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
T 1vcl_A 368 DN------YDSDEEFTRGCMWQLAIETTEVKSG 394 (432)
T ss_dssp CB------CTTSSBCSSEEEEEEEEEEEETTTT
T ss_pred CC------CcccChhhccceEEEeeeeeecccC
Confidence 53 4568888999999999888876665
No 38
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=83.63 E-value=1.2 Score=47.39 Aligned_cols=45 Identities=22% Similarity=0.474 Sum_probs=33.7
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceee--eeEEeCCCCCceEEEecCCceeEEEc
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITG 326 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~--E~V~I~~~~~~i~l~G~g~~~t~I~~ 326 (386)
=.-||+||++. -+|+|.+|+|. ..|.++ .+++|.|++...++|.+
T Consensus 39 T~Aiq~Ai~aG----------g~V~IPaGtYlisg~I~L~---snv~L~Geg~~~t~Lk~ 85 (772)
T 3gqn_A 39 IRAFEKAIESG----------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRF 85 (772)
T ss_dssp HHHHHHHHHTT----------SCEEECSEEEEESSCEEEC---SSCEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcC----------CEEEECCccEEEEeEEEEC---CCcEEEEecCCCCEEEe
Confidence 35689999862 37999999998 467885 48889998755566654
No 39
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=78.52 E-value=2.3 Score=40.98 Aligned_cols=26 Identities=15% Similarity=-0.017 Sum_probs=14.4
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCceee
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQ 300 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G~Y~ 300 (386)
|..||+ ++++... +.-+++|.+|+|.
T Consensus 8 ~~aiq~-i~aC~~~-----gg~~v~vP~G~~l 33 (335)
T 1k5c_A 8 VDDAKD-IAGCSAV-----TLNGFTVPAGNTL 33 (335)
T ss_dssp TTGGGG-CTTCSEE-----EECCEEECTTCCE
T ss_pred HHHhHH-HHhcccC-----CCCEEEECCCEEE
Confidence 455666 6665432 1235666777665
No 40
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=55.81 E-value=10 Score=39.31 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=29.7
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEeCc-eeee-------------eEEeCCCCCceEEEecC
Q 041181 269 FSTITDAINFAPNNTNVSNGYFLIYITAG-VYQE-------------YVSIPKNKINLLMIGDG 318 (386)
Q Consensus 269 f~TIq~Av~aap~~~~~~~~~~~I~I~~G-~Y~E-------------~V~I~~~~~~i~l~G~g 318 (386)
=.-||+|++++... +.-+|+|.+| +|.- .|.+ |.+++|.-+|
T Consensus 64 T~AIqkAIdaCs~~-----GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L---kSnVtL~LdG 119 (600)
T 2x6w_A 64 RQYLQAAIDYVSSN-----GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL---RSNVNLNIEG 119 (600)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEECTTCEEEECSCCCGGGGGGTEEEEC---CTTEEEEECS
T ss_pred HHHHHHHHHHhhhc-----CCCEEEECCCCEEEecccccccccccccceEE---cCceEEeeec
Confidence 34599999988643 2268999999 9865 3555 3577777666
No 41
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=53.95 E-value=21 Score=36.61 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=12.9
Q ss_pred EEcCceEEECCceecCC
Q 041181 344 VVAPNFVASSITFRNTA 360 (386)
Q Consensus 344 v~~~~f~~~~lt~~Nt~ 360 (386)
....++.++||+|+|+.
T Consensus 290 ~~c~nV~I~Giti~Nsp 306 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP 306 (549)
T ss_dssp SSCEEEEEESCEEECCS
T ss_pred CCceEEEEECcEEECCC
Confidence 34578888888888874
No 42
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=46.89 E-value=15 Score=36.92 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=35.1
Q ss_pred CCcccHHHHHhhCCCCCCCCCceEEEEEeCc----eee--eeEEeCCCCCceEEEecCCc
Q 041181 267 GNFSTITDAINFAPNNTNVSNGYFLIYITAG----VYQ--EYVSIPKNKINLLMIGDGIN 320 (386)
Q Consensus 267 g~f~TIq~Av~aap~~~~~~~~~~~I~I~~G----~Y~--E~V~I~~~~~~i~l~G~g~~ 320 (386)
-+-.-||+||+++... .+.-+|||.+| +|. ..+.++ .+++|.|++..
T Consensus 66 DDTaAIQkAIdaA~a~----~GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~A 118 (514)
T 2vbk_A 66 DNYQAIQNAIDAVASL----PSGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKA 118 (514)
T ss_dssp CCHHHHHHHHHHHHTS----TTCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTT
T ss_pred ccHHHHHHHHHHHhhc----CCCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCc
Confidence 3566799999987542 12379999999 887 467775 48999999854
No 43
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=41.85 E-value=69 Score=33.02 Aligned_cols=16 Identities=6% Similarity=0.028 Sum_probs=13.0
Q ss_pred EcCceEEECCceecCC
Q 041181 345 VAPNFVASSITFRNTA 360 (386)
Q Consensus 345 ~~~~f~~~~lt~~Nt~ 360 (386)
...++.++||||+|+.
T Consensus 331 ~c~NV~I~Giti~NSp 346 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPP 346 (574)
T ss_dssp SSEEEEEESCEEECCS
T ss_pred CceeEEEECeEEECCC
Confidence 5688899999999864
No 44
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=38.97 E-value=34 Score=34.76 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=32.2
Q ss_pred eEEEEEcCceEEECCceecCCCCCCCceeeEE-------EcCCcEEEEeeEEeC
Q 041181 340 ATFSVVAPNFVASSITFRNTAGPSKGQAAALR-------SGADFSTFYSCSFEG 386 (386)
Q Consensus 340 at~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~-------v~~d~~~f~~C~~~g 386 (386)
+.+.|.|++++++|..|+|.... +.+.+. +.+.+..+.+|.|.|
T Consensus 119 ~~iav~G~~~~I~nn~I~~~~~g---d~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 119 GLVAIYGSYNRITACVFDCFDEA---NSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp CSEEECSSSCEEESCEEESCCSS---CSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred cceEEecCCeEEEeeEEEcCCCC---ceeeEeecccceeeeccccEEECcEEEC
Confidence 45677899999999999987542 224444 567777888888876
No 45
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=26.74 E-value=54 Score=31.08 Aligned_cols=40 Identities=15% Similarity=0.069 Sum_probs=30.1
Q ss_pred eEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 340 ATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 340 at~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
.-+.|.+|...++|..|.. .| -.|.+++.+..|++|.|.|
T Consensus 111 vAl~v~~d~~~f~~c~f~g------~Q-DTLy~~~~r~~~~~c~I~G 150 (317)
T 1xg2_A 111 VALRVGADMSVINRCRIDA------YQ-DTLYAHSQRQFYRDSYVTG 150 (317)
T ss_dssp CSEEECCTTEEEESCEEEC------ST-TCEEECSSEEEEESCEEEE
T ss_pred EEEEEeCCcEEEEEeEeCc------cc-cceeecCccEEEEeeEEEe
Confidence 4467889999999999983 34 2477777777788888765
No 46
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=25.75 E-value=98 Score=31.94 Aligned_cols=37 Identities=14% Similarity=0.323 Sum_probs=22.1
Q ss_pred CceEEECCceecCCCCCCCceeeEEEc-C-----CcEEEEeeEEe
Q 041181 347 PNFVASSITFRNTAGPSKGQAAALRSG-A-----DFSTFYSCSFE 385 (386)
Q Consensus 347 ~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~-----d~~~f~~C~~~ 385 (386)
.++.++||+|+|..|.. .++.+... + ..+.|.|+.+.
T Consensus 520 ~~V~i~nI~~~n~~gt~--~~i~i~g~~~~~~p~~ni~~~nv~i~ 562 (608)
T 2uvf_A 520 YDFTLKNVTVDNSTGKN--PSIEIKGDTANKAWHRLVHVNNVQLN 562 (608)
T ss_dssp EEEEEEEEEEEEECSSS--CSEEEECBGGGTBCEEEEEEEEEEEE
T ss_pred ccEEEEeEEEEeeeceE--EeEEEEEEcCCCCccccEEEEeEEEE
Confidence 57888888888877632 33444421 1 34666666654
No 47
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=25.34 E-value=4.5e+02 Score=25.77 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=41.7
Q ss_pred EEEEEeC-ceeeeeEEeCCCC----CceEEEecCCceeEEEccCCCCCC--CCccceeEEEEE--cCceEEECCceecCC
Q 041181 290 FLIYITA-GVYQEYVSIPKNK----INLLMIGDGINQTIITGNRSVADG--WTTFNSATFSVV--APNFVASSITFRNTA 360 (386)
Q Consensus 290 ~~I~I~~-G~Y~E~V~I~~~~----~~i~l~G~g~~~t~I~~~~~~~~g--~~t~~sat~~v~--~~~f~~~~lt~~Nt~ 360 (386)
-+|.|.. +-=.+-++|.+.. +.|+|.| +.|.|..-..+| ... .-+-+.|. +++|+++|+.|++..
T Consensus 111 s~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-----v~I~G~~~~~~G~s~~~-~dAGI~v~~~~d~~~I~nn~i~~~~ 184 (410)
T 2inu_A 111 SHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-----FCLDGVGFTPGKNSYHN-GKTGIEVASDNDSFHITGMGFVYLE 184 (410)
T ss_dssp EEEEECCCTTSCEEEEECCCSSSCEECCEEES-----CEEECCCCSSSTTSCCC-SCEEEEECSCEESCEEESCEEESCS
T ss_pred cEEEEeccccccceeEEeeccCcccCCcEECC-----EEEECCEeecCCCCccc-CceeEEEeccCCeEEEECCEEeccc
Confidence 4444444 4223456664321 2344433 556665322222 122 23455555 799999999999764
Q ss_pred -CCCCCceeeEEEcCCcE
Q 041181 361 -GPSKGQAAALRSGADFS 377 (386)
Q Consensus 361 -g~~~~qAvAl~v~~d~~ 377 (386)
|-.-++|-++++....+
T Consensus 185 fGI~l~~a~~~~I~~N~I 202 (410)
T 2inu_A 185 HALIVRGADALRVNDNMI 202 (410)
T ss_dssp EEEEETTEESCEEESCEE
T ss_pred EEEEEccCCCcEEECCEE
Confidence 22224455555544443
No 48
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=23.25 E-value=54 Score=31.14 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=29.3
Q ss_pred eEEEEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 340 ATFSVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 340 at~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
.-+.|.++...++|..|.. .| -.|.+++.+..|++|.|.|
T Consensus 115 vAl~v~~d~~~f~~c~f~g------~Q-DTLy~~~~r~~~~~c~I~G 154 (319)
T 1gq8_A 115 VALRVGSDLSAFYRCDILA------YQ-DSLYVHSNRQFFINCFIAG 154 (319)
T ss_dssp CSEEECCTTEEEEEEEEEC------ST-TCEEECSSEEEEESCEEEE
T ss_pred EEEEecCCcEEEEEeEECc------cc-eeeeecCccEEEEecEEEe
Confidence 4467789999999999973 34 2477776777777887765
No 49
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=22.02 E-value=1.4e+02 Score=21.07 Aligned_cols=30 Identities=17% Similarity=0.027 Sum_probs=25.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041181 97 TLSIGAIRALEDCRLLADLNMDYLSTSYQT 126 (386)
Q Consensus 97 ~~~~~~~~AL~DC~el~~~aid~L~~S~~~ 126 (386)
.++..+..+++.|++-|-++-..+.+.+..
T Consensus 33 ~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~ 62 (64)
T 3cjh_B 33 NLSSQEEQCLSNCVNRFLDTNIRIVNGLQN 62 (64)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468899999999999999998888777654
No 50
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=20.90 E-value=2.3e+02 Score=26.76 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=22.7
Q ss_pred CceEEECCceecCC--CCCCCceeeEEEcCC----cEEEEeeEEe
Q 041181 347 PNFVASSITFRNTA--GPSKGQAAALRSGAD----FSTFYSCSFE 385 (386)
Q Consensus 347 ~~f~~~~lt~~Nt~--g~~~~qAvAl~v~~d----~~~f~~C~~~ 385 (386)
+++.++||+|+|-. |.....+.++.+.+. ...|.|..+.
T Consensus 271 ~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~~c~ni~~~nv~i~ 315 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATTIKVNNAATRVTVECGNCSGNWNWSQLTVT 315 (335)
T ss_dssp SSSCEEEEEECSSCEEEEECTTCEEEEEECSSEESEEEEEEEEEE
T ss_pred CCceEEEEEEEEEEEeeEEcCCceEEEEECCCcCCCEEEEeEEEE
Confidence 35778888888877 643222455666543 4455555554
No 51
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=20.29 E-value=34 Score=32.85 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=29.8
Q ss_pred EEEcCceEEECCceecCCCCCCCceeeEEEcCCcEEEEeeEEeC
Q 041181 343 SVVAPNFVASSITFRNTAGPSKGQAAALRSGADFSTFYSCSFEG 386 (386)
Q Consensus 343 ~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~C~~~g 386 (386)
.+.+|...++|..|.. .|- .|.+.+.|..|++|.|.|
T Consensus 136 ~v~~d~~~f~~c~f~G------~QD-TLy~~~gr~~~~~c~I~G 172 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVG------YQA-TLYVSGGRSFFSDCRISG 172 (342)
T ss_dssp CTTCBSEEEEEEEEEC------STT-CEEECSSEEEEESCEEEE
T ss_pred eeccCcEEEEeeEEec------ccc-eEEECCCCEEEEcCEEEe
Confidence 5779999999999982 453 588888888889998876
Done!