BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041182
         (155 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480 OS=Arabidopsis thaliana
          GN=At1g66480 PE=1 SV=1
          Length = 225

 Score = 32.7 bits (73), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 22 RIVHLNGYVEEITRPITAGEILEANPNHVL--SKPCSQGVVRKILILSPESELKRGSIYF 79
          +++ ++G    I  P+TA E+    P +VL  S+      VR    L P   LK    YF
Sbjct: 13 KVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRS-KPLEPNQTLKPKKTYF 71

Query: 80 LIPASSLPGEKKKCGNNNK 98
          L+    LP E       NK
Sbjct: 72 LVELPKLPPETTAVDTENK 90


>sp|Q9Z7A6|ENO_CHLPN Enolase OS=Chlamydia pneumoniae GN=eno PE=3 SV=2
          Length = 428

 Score = 31.6 bits (70), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 5   LRCCLACVLPCGALDLIR-IVHLN---GYVEEITRPITAGEILEA 45
           L  C AC LPC  ++LI   +H +   G+ E + RPI A  I EA
Sbjct: 136 LGGCFACSLPCPMMNLINGGMHADNGLGFQEFMIRPIGASSIKEA 180


>sp|Q62919|NELL1_RAT Protein kinase C-binding protein NELL1 OS=Rattus norvegicus
           GN=Nell1 PE=2 SV=2
          Length = 810

 Score = 31.2 bits (69), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 24  VHLNGYVEEITRP--ITAGEILEANPNHVLSKPCSQ---GVVRKILILSP-------ESE 71
           VH++G   ++ RP  I  G++L A    +L+K C +   GV+ KI    P       +  
Sbjct: 321 VHISGQCCKVCRPKCIYGGKVL-AEGQRILTKTCRECRGGVLVKITEACPPLNCSAKDHI 379

Query: 72  LKRGSIYFLIPASSLPGEKKKCGNNNKNKAFKKSKKC 108
           L       + P  +   E  KCG N++ K +     C
Sbjct: 380 LPENQCCRVCPGHNFCAEAPKCGENSECKNWNTKATC 416


>sp|Q9M647|IAR1_ARATH IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1
           PE=1 SV=3
          Length = 469

 Score = 30.0 bits (66), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 83  ASSLPGEKKKCGNNNKNKAFKKSKKCYKDVTSCDQYLTEVLSDKKSSSSRRRHHRSSSRV 142
           + ++    +K    + +K+ +K K    D T      TE+ SD KS    +   RSSS V
Sbjct: 263 SDAIVNSSEKVSGGSTDKSLRKRKTSASDATDKSDSGTEITSDGKSDKPEQVETRSSSLV 322


>sp|Q16RY9|DAAF1_AEDAE Dynein assembly factor 1, axonemal homolog OS=Aedes aegypti
           GN=AAEL010772 PE=3 SV=1
          Length = 1107

 Score = 29.6 bits (65), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 16  GALDLIRIVHLNGYVEEITRPIT-AGEILEANPNHVLSKPCSQGVVRKILILSPE 69
             ++ I+ V     +EEI+     A E  +  P+ V++KPCS+ ++ +I+I + E
Sbjct: 348 ATIEDIKAVSPKKLIEEISSDSDGAKENYDCKPDEVIAKPCSEKLIEEIVIETAE 402


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,666,118
Number of Sequences: 539616
Number of extensions: 2262460
Number of successful extensions: 5864
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5845
Number of HSP's gapped (non-prelim): 28
length of query: 155
length of database: 191,569,459
effective HSP length: 107
effective length of query: 48
effective length of database: 133,830,547
effective search space: 6423866256
effective search space used: 6423866256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)